Query 013258
Match_columns 447
No_of_seqs 531 out of 3804
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 02:01:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013258.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013258hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 7E-46 1.5E-50 410.3 27.7 343 67-441 475-825 (968)
2 KOG1187 Serine/threonine prote 100.0 2.2E-37 4.7E-42 301.7 17.2 161 281-444 61-222 (361)
3 KOG0595 Serine/threonine-prote 100.0 3.3E-31 7.2E-36 247.8 13.7 143 295-444 10-160 (429)
4 KOG0192 Tyrosine kinase specif 100.0 6.4E-29 1.4E-33 240.8 14.3 140 300-444 46-189 (362)
5 KOG0581 Mitogen-activated prot 100.0 4.4E-29 9.6E-34 231.6 12.5 140 299-445 83-225 (364)
6 KOG0615 Serine/threonine prote 100.0 3.8E-29 8.2E-34 233.9 11.7 143 295-444 172-324 (475)
7 KOG0600 Cdc2-related protein k 100.0 1.4E-28 3E-33 235.5 11.7 143 295-444 117-263 (560)
8 KOG0598 Ribosomal protein S6 k 100.0 1.3E-28 2.9E-33 228.4 10.8 144 294-444 24-170 (357)
9 KOG0575 Polo-like serine/threo 99.9 9E-28 2E-32 235.3 13.7 143 295-444 18-163 (592)
10 KOG3653 Transforming growth fa 99.9 1.8E-27 3.9E-32 226.1 14.3 138 297-444 212-361 (534)
11 KOG0611 Predicted serine/threo 99.9 2.8E-28 6.1E-33 227.1 7.8 142 296-444 54-198 (668)
12 KOG0659 Cdk activating kinase 99.9 1.3E-27 2.8E-32 211.9 10.9 143 295-444 2-146 (318)
13 KOG0197 Tyrosine kinases [Sign 99.9 1.4E-27 3E-32 231.4 12.0 138 300-444 211-348 (468)
14 KOG0593 Predicted protein kina 99.9 6.7E-28 1.4E-32 217.2 8.6 143 295-444 2-146 (396)
15 KOG0580 Serine/threonine prote 99.9 9.1E-28 2E-32 209.9 7.6 146 294-444 21-169 (281)
16 KOG0592 3-phosphoinositide-dep 99.9 2E-27 4.4E-32 229.3 9.8 147 293-446 71-221 (604)
17 KOG0616 cAMP-dependent protein 99.9 1.1E-26 2.5E-31 208.8 10.7 143 295-444 44-189 (355)
18 KOG1026 Nerve growth factor re 99.9 5.1E-27 1.1E-31 238.3 9.4 149 293-444 484-648 (774)
19 KOG0591 NIMA (never in mitosis 99.9 9.4E-28 2E-32 214.3 2.8 148 296-444 20-173 (375)
20 KOG0605 NDR and related serine 99.9 2.6E-26 5.6E-31 221.7 12.8 147 291-444 137-286 (550)
21 KOG0661 MAPK related serine/th 99.9 1.9E-27 4.2E-32 226.1 4.8 145 293-444 8-155 (538)
22 KOG0585 Ca2+/calmodulin-depend 99.9 3.3E-26 7E-31 217.6 12.1 146 293-445 95-256 (576)
23 KOG0194 Protein tyrosine kinas 99.9 1.4E-26 3.1E-31 227.7 9.6 148 291-444 153-307 (474)
24 KOG0582 Ste20-like serine/thre 99.9 5.3E-26 1.2E-30 214.8 12.8 146 294-444 25-171 (516)
25 KOG0196 Tyrosine kinase, EPH ( 99.9 1.2E-26 2.6E-31 231.8 8.8 143 296-444 630-776 (996)
26 KOG0583 Serine/threonine prote 99.9 6.4E-26 1.4E-30 221.7 13.4 145 293-444 15-166 (370)
27 KOG0663 Protein kinase PITSLRE 99.9 2.6E-26 5.7E-31 209.5 9.7 143 295-444 76-222 (419)
28 KOG1094 Discoidin domain recep 99.9 3.4E-26 7.3E-31 222.0 9.2 147 293-444 536-682 (807)
29 KOG0594 Protein kinase PCTAIRE 99.9 1.1E-25 2.4E-30 208.7 11.5 145 296-444 12-165 (323)
30 KOG0198 MEKK and related serin 99.9 2.1E-25 4.6E-30 210.1 13.0 143 296-445 18-164 (313)
31 cd05102 PTKc_VEGFR3 Catalytic 99.9 1.4E-25 3.1E-30 219.3 12.2 150 292-444 4-219 (338)
32 KOG0597 Serine-threonine prote 99.9 7.5E-26 1.6E-30 218.9 9.2 142 295-444 2-145 (808)
33 cd05096 PTKc_DDR1 Catalytic do 99.9 4.5E-25 9.7E-30 212.5 14.1 147 295-444 5-183 (304)
34 KOG0193 Serine/threonine prote 99.9 5.9E-26 1.3E-30 221.8 7.3 149 287-444 384-533 (678)
35 KOG2052 Activin A type IB rece 99.9 9E-25 1.9E-29 206.4 14.9 140 295-444 211-361 (513)
36 cd05628 STKc_NDR1 Catalytic do 99.9 4.8E-25 1.1E-29 217.8 13.0 143 295-444 1-146 (363)
37 cd05064 PTKc_EphR_A10 Catalyti 99.9 8E-25 1.7E-29 206.7 13.9 144 295-444 5-152 (266)
38 KOG0610 Putative serine/threon 99.9 3E-25 6.5E-30 208.1 10.7 143 296-443 78-223 (459)
39 cd05629 STKc_NDR_like_fungal C 99.9 6.2E-25 1.3E-29 218.1 13.2 143 295-444 1-146 (377)
40 cd05599 STKc_NDR_like Catalyti 99.9 5.4E-25 1.2E-29 217.5 12.4 143 295-444 1-146 (364)
41 KOG0658 Glycogen synthase kina 99.9 7.3E-26 1.6E-30 209.8 5.6 141 297-446 26-173 (364)
42 cd05626 STKc_LATS2 Catalytic d 99.9 8.6E-25 1.9E-29 217.4 13.0 142 296-444 2-146 (381)
43 cd05612 STKc_PRKX_like Catalyt 99.9 6.5E-25 1.4E-29 210.2 11.5 143 295-444 1-146 (291)
44 PTZ00263 protein kinase A cata 99.9 8.8E-25 1.9E-29 213.0 12.6 143 295-444 18-163 (329)
45 cd05104 PTKc_Kit Catalytic dom 99.9 8.4E-25 1.8E-29 216.8 12.1 148 294-444 34-259 (375)
46 cd07871 STKc_PCTAIRE3 Catalyti 99.9 1.8E-24 3.8E-29 206.8 13.6 143 295-444 5-148 (288)
47 cd05621 STKc_ROCK2 Catalytic d 99.9 1E-24 2.2E-29 215.8 12.1 147 290-444 38-187 (370)
48 cd05571 STKc_PKB Catalytic dom 99.9 2E-24 4.4E-29 209.9 13.7 137 301-444 1-140 (323)
49 KOG0588 Serine/threonine prote 99.9 6.6E-25 1.4E-29 216.3 10.2 142 296-444 13-157 (786)
50 cd05598 STKc_LATS Catalytic do 99.9 1.8E-24 3.9E-29 214.7 13.3 142 296-444 2-146 (376)
51 cd05625 STKc_LATS1 Catalytic d 99.9 1.5E-24 3.2E-29 215.8 12.5 142 296-444 2-146 (382)
52 cd05595 STKc_PKB_beta Catalyti 99.9 2.7E-24 5.8E-29 209.0 13.7 137 301-444 1-140 (323)
53 PTZ00426 cAMP-dependent protei 99.9 1.9E-24 4.2E-29 211.4 12.6 144 294-444 29-176 (340)
54 cd07869 STKc_PFTAIRE1 Catalyti 99.9 3.8E-24 8.2E-29 206.0 14.4 144 294-444 4-148 (303)
55 cd05600 STKc_Sid2p_Dbf2p Catal 99.9 2.3E-24 5E-29 210.4 12.9 143 295-444 1-146 (333)
56 cd05593 STKc_PKB_gamma Catalyt 99.9 3.9E-24 8.5E-29 208.3 14.0 137 301-444 1-140 (328)
57 cd05631 STKc_GRK4 Catalytic do 99.9 3.5E-24 7.5E-29 204.5 13.1 143 297-444 2-147 (285)
58 cd05106 PTKc_CSF-1R Catalytic 99.9 2.8E-24 6E-29 213.0 12.5 149 293-444 36-257 (374)
59 cd05594 STKc_PKB_alpha Catalyt 99.9 8.1E-24 1.8E-28 205.8 15.1 137 301-444 1-141 (325)
60 cd05596 STKc_ROCK Catalytic do 99.9 1.9E-24 4.1E-29 214.0 10.7 145 292-444 40-187 (370)
61 cd05585 STKc_YPK1_like Catalyt 99.9 5.5E-24 1.2E-28 205.8 13.6 135 303-444 1-138 (312)
62 cd06649 PKc_MEK2 Catalytic dom 99.9 7.7E-24 1.7E-28 206.5 14.4 145 294-444 4-149 (331)
63 cd05627 STKc_NDR2 Catalytic do 99.9 4.7E-24 1E-28 210.5 12.9 143 295-444 1-146 (360)
64 cd05108 PTKc_EGFR Catalytic do 99.9 6.8E-24 1.5E-28 205.5 13.7 143 295-444 7-154 (316)
65 cd06650 PKc_MEK1 Catalytic dom 99.9 7.1E-24 1.5E-28 206.9 13.9 145 294-444 4-149 (333)
66 cd05597 STKc_DMPK_like Catalyt 99.9 5.7E-24 1.2E-28 207.4 13.2 144 295-444 1-147 (331)
67 cd05622 STKc_ROCK1 Catalytic d 99.9 4.3E-24 9.3E-29 211.4 12.3 150 287-444 35-187 (371)
68 cd05601 STKc_CRIK Catalytic do 99.9 5.9E-24 1.3E-28 207.2 13.1 144 295-444 1-147 (330)
69 cd05105 PTKc_PDGFR_alpha Catal 99.9 6.6E-24 1.4E-28 211.6 13.3 149 293-444 35-282 (400)
70 cd05624 STKc_MRCK_beta Catalyt 99.9 6.7E-24 1.5E-28 206.9 13.1 144 295-444 1-147 (331)
71 KOG1095 Protein tyrosine kinas 99.9 3.3E-24 7.2E-29 225.4 10.9 148 294-444 691-847 (1025)
72 cd05033 PTKc_EphR Catalytic do 99.9 1.9E-23 4E-28 197.1 14.9 144 295-444 4-151 (266)
73 cd05573 STKc_ROCK_NDR_like Cat 99.9 5.3E-24 1.2E-28 209.2 11.6 143 295-444 1-146 (350)
74 PLN00034 mitogen-activated pro 99.9 5.9E-24 1.3E-28 209.2 11.8 138 296-444 75-213 (353)
75 KOG0694 Serine/threonine prote 99.9 4.5E-24 9.8E-29 211.8 10.7 146 291-444 364-513 (694)
76 cd05114 PTKc_Tec_Rlk Catalytic 99.9 1.8E-23 3.9E-28 196.1 14.3 142 295-444 4-145 (256)
77 cd05608 STKc_GRK1 Catalytic do 99.9 1.3E-23 2.8E-28 200.0 13.4 139 303-444 1-142 (280)
78 cd05582 STKc_RSK_N N-terminal 99.9 1.3E-23 2.8E-28 203.7 13.7 137 301-444 2-143 (318)
79 KOG0578 p21-activated serine/t 99.9 4.6E-24 9.9E-29 207.7 10.2 141 295-444 273-414 (550)
80 cd05584 STKc_p70S6K Catalytic 99.9 1.4E-23 3.1E-28 203.9 13.6 137 301-444 2-145 (323)
81 cd05084 PTKc_Fes Catalytic dom 99.9 2.6E-23 5.5E-28 194.5 14.5 138 301-444 1-139 (252)
82 cd05587 STKc_cPKC Catalytic do 99.9 1.5E-23 3.2E-28 204.0 13.3 142 296-444 1-146 (324)
83 cd07872 STKc_PCTAIRE2 Catalyti 99.9 2.1E-23 4.6E-28 201.4 13.9 143 295-444 6-149 (309)
84 cd05591 STKc_nPKC_epsilon Cata 99.9 2.1E-23 4.6E-28 202.5 13.8 137 301-444 1-141 (321)
85 cd05588 STKc_aPKC Catalytic do 99.9 2.3E-23 5E-28 203.0 14.1 137 301-444 1-141 (329)
86 cd05623 STKc_MRCK_alpha Cataly 99.9 1.7E-23 3.6E-28 204.3 13.1 144 295-444 1-147 (332)
87 cd05614 STKc_MSK2_N N-terminal 99.9 1.9E-23 4E-28 203.9 13.2 142 296-444 1-150 (332)
88 cd05042 PTKc_Aatyk Catalytic d 99.9 3E-23 6.5E-28 196.1 14.1 140 302-444 2-145 (269)
89 cd05589 STKc_PKN Catalytic dom 99.9 1.8E-23 3.9E-28 203.3 12.8 140 297-444 1-146 (324)
90 cd05090 PTKc_Ror1 Catalytic do 99.9 2.7E-23 5.8E-28 198.0 13.8 147 295-444 5-169 (283)
91 cd05061 PTKc_InsR Catalytic do 99.9 2.4E-23 5.2E-28 198.9 13.5 150 292-444 3-164 (288)
92 cd05605 STKc_GRK4_like Catalyt 99.9 2E-23 4.3E-28 199.3 12.8 144 296-444 1-147 (285)
93 PF07714 Pkinase_Tyr: Protein 99.9 1.2E-23 2.6E-28 197.9 11.1 140 300-444 4-148 (259)
94 cd05066 PTKc_EphR_A Catalytic 99.9 3.4E-23 7.4E-28 195.5 14.2 144 295-444 4-151 (267)
95 cd05107 PTKc_PDGFR_beta Cataly 99.9 2.3E-23 5E-28 207.6 13.6 149 293-444 35-284 (401)
96 cd05062 PTKc_IGF-1R Catalytic 99.9 2.7E-23 5.9E-28 197.3 13.5 149 293-444 4-164 (277)
97 cd05618 STKc_aPKC_iota Catalyt 99.9 3E-23 6.5E-28 202.2 13.9 137 301-444 1-141 (329)
98 KOG1989 ARK protein kinase fam 99.9 6.8E-24 1.5E-28 216.5 9.7 147 295-445 37-192 (738)
99 cd05603 STKc_SGK2 Catalytic do 99.9 3.1E-23 6.7E-28 201.4 13.9 137 301-444 1-141 (321)
100 KOG0662 Cyclin-dependent kinas 99.9 5.3E-24 1.2E-28 178.5 7.1 142 296-444 3-146 (292)
101 cd06615 PKc_MEK Catalytic doma 99.9 3.8E-23 8.3E-28 199.5 14.2 144 295-444 1-145 (308)
102 cd05592 STKc_nPKC_theta_delta 99.9 3.6E-23 7.8E-28 200.5 14.0 137 301-444 1-141 (316)
103 cd05068 PTKc_Frk_like Catalyti 99.9 4.3E-23 9.3E-28 194.1 14.1 145 293-444 4-148 (261)
104 cd05590 STKc_nPKC_eta Catalyti 99.9 2.9E-23 6.4E-28 201.4 13.3 137 301-444 1-141 (320)
105 cd07848 STKc_CDKL5 Catalytic d 99.9 2.5E-23 5.3E-28 198.6 12.5 143 295-444 1-145 (287)
106 cd05097 PTKc_DDR_like Catalyti 99.9 3.7E-23 8E-28 198.3 13.6 147 295-444 5-174 (295)
107 cd05616 STKc_cPKC_beta Catalyt 99.9 3.4E-23 7.3E-28 201.3 13.5 142 296-444 1-146 (323)
108 cd05575 STKc_SGK Catalytic dom 99.9 3.7E-23 8.1E-28 201.0 13.7 137 301-444 1-141 (323)
109 cd05088 PTKc_Tie2 Catalytic do 99.9 3.9E-23 8.5E-28 199.0 13.8 147 295-444 7-169 (303)
110 cd05103 PTKc_VEGFR2 Catalytic 99.9 3.5E-23 7.6E-28 202.9 13.5 148 294-444 6-224 (343)
111 KOG0586 Serine/threonine prote 99.9 1.9E-23 4.2E-28 205.1 11.5 145 293-444 54-200 (596)
112 cd05619 STKc_nPKC_theta Cataly 99.9 4.5E-23 9.8E-28 199.8 14.1 137 301-444 1-141 (316)
113 cd05113 PTKc_Btk_Bmx Catalytic 99.9 5.5E-23 1.2E-27 193.0 14.3 142 295-444 4-145 (256)
114 cd05086 PTKc_Aatyk2 Catalytic 99.9 6.3E-23 1.4E-27 193.9 14.7 140 302-444 2-144 (268)
115 cd05087 PTKc_Aatyk1_Aatyk3 Cat 99.9 6.7E-23 1.5E-27 193.7 14.8 141 301-444 1-145 (269)
116 cd05620 STKc_nPKC_delta Cataly 99.9 4.8E-23 1E-27 199.6 14.0 137 301-444 1-141 (316)
117 cd07859 STKc_TDY_MAPK_plant Ca 99.9 3E-23 6.4E-28 202.8 12.7 141 296-444 1-148 (338)
118 cd05072 PTKc_Lyn Catalytic dom 99.9 5E-23 1.1E-27 193.6 13.8 144 294-444 5-148 (261)
119 cd05085 PTKc_Fer Catalytic dom 99.9 8.4E-23 1.8E-27 190.7 15.1 138 301-444 1-138 (250)
120 cd05604 STKc_SGK3 Catalytic do 99.9 4.4E-23 9.5E-28 200.7 13.7 137 301-444 1-141 (325)
121 PTZ00267 NIMA-related protein 99.9 2.8E-23 6E-28 212.3 12.6 144 297-444 69-214 (478)
122 cd05059 PTKc_Tec_like Catalyti 99.9 6.6E-23 1.4E-27 192.3 14.1 141 296-444 5-145 (256)
123 cd05615 STKc_cPKC_alpha Cataly 99.9 3.7E-23 8.1E-28 201.0 12.8 142 296-444 1-146 (323)
124 cd08228 STKc_Nek6 Catalytic do 99.9 6.8E-23 1.5E-27 193.3 14.0 147 295-444 2-151 (267)
125 PHA02988 hypothetical protein; 99.9 1.1E-22 2.3E-27 194.0 15.4 151 282-444 12-168 (283)
126 PHA03212 serine/threonine kina 99.9 4.1E-23 8.9E-28 205.6 13.0 136 294-444 91-227 (391)
127 cd05049 PTKc_Trk Catalytic dom 99.9 5.9E-23 1.3E-27 195.1 13.5 147 295-444 5-167 (280)
128 cd05079 PTKc_Jak1_rpt2 Catalyt 99.9 8.3E-23 1.8E-27 194.7 14.4 143 296-444 5-154 (284)
129 KOG0607 MAP kinase-interacting 99.9 1.5E-23 3.2E-28 190.4 8.4 145 286-443 74-223 (463)
130 cd05053 PTKc_FGFR Catalytic do 99.9 5E-23 1.1E-27 197.1 12.7 150 292-444 9-177 (293)
131 cd05095 PTKc_DDR2 Catalytic do 99.9 8.2E-23 1.8E-27 196.0 14.0 147 295-444 5-175 (296)
132 PRK13184 pknD serine/threonine 99.9 6.2E-23 1.4E-27 217.1 14.3 147 295-444 2-158 (932)
133 cd05089 PTKc_Tie1 Catalytic do 99.9 8.9E-23 1.9E-27 195.9 14.2 147 295-444 2-164 (297)
134 cd05048 PTKc_Ror Catalytic Dom 99.9 1.1E-22 2.4E-27 193.6 14.6 147 295-444 5-169 (283)
135 cd05602 STKc_SGK1 Catalytic do 99.9 8E-23 1.7E-27 198.8 13.8 137 301-444 1-141 (325)
136 cd05617 STKc_aPKC_zeta Catalyt 99.9 6.8E-23 1.5E-27 199.5 13.3 137 301-444 1-141 (327)
137 cd05101 PTKc_FGFR2 Catalytic d 99.9 9.2E-23 2E-27 196.4 14.0 149 293-444 13-182 (304)
138 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 99.9 1.1E-22 2.4E-27 193.7 14.4 143 295-444 4-153 (284)
139 cd05570 STKc_PKC Catalytic dom 99.9 9E-23 2E-27 197.9 13.9 137 301-444 1-141 (318)
140 cd05045 PTKc_RET Catalytic dom 99.9 1.1E-22 2.5E-27 194.4 14.4 146 296-444 1-172 (290)
141 cd05148 PTKc_Srm_Brk Catalytic 99.9 6.2E-23 1.3E-27 192.9 12.3 145 294-444 5-149 (261)
142 cd08224 STKc_Nek6_Nek7 Catalyt 99.9 1.4E-22 2.9E-27 191.1 14.5 147 295-444 2-151 (267)
143 cd05065 PTKc_EphR_B Catalytic 99.9 9.5E-23 2.1E-27 192.6 13.4 143 296-444 5-151 (269)
144 cd05098 PTKc_FGFR1 Catalytic d 99.9 8.4E-23 1.8E-27 197.0 13.3 148 294-444 17-185 (307)
145 cd05054 PTKc_VEGFR Catalytic d 99.9 5.5E-23 1.2E-27 200.9 12.0 149 293-444 5-218 (337)
146 cd07853 STKc_NLK Catalytic dom 99.9 8.9E-23 1.9E-27 202.3 13.7 141 296-444 1-148 (372)
147 cd07873 STKc_PCTAIRE1 Catalyti 99.9 1.1E-22 2.5E-27 195.5 14.1 143 295-444 6-149 (301)
148 cd05111 PTK_HER3 Pseudokinase 99.9 1.4E-22 3E-27 192.8 14.3 143 295-444 7-154 (279)
149 cd05050 PTKc_Musk Catalytic do 99.9 8E-23 1.7E-27 195.2 12.7 148 294-444 4-175 (288)
150 cd05109 PTKc_HER2 Catalytic do 99.9 1.5E-22 3.2E-27 192.5 14.4 144 294-444 6-154 (279)
151 cd08227 PK_STRAD_alpha Pseudok 99.9 1.3E-22 2.7E-27 197.6 14.2 141 299-444 2-146 (327)
152 cd05046 PTK_CCK4 Pseudokinase 99.9 1.2E-22 2.7E-27 192.4 13.7 147 295-444 5-162 (275)
153 KOG0660 Mitogen-activated prot 99.9 3.4E-23 7.4E-28 191.8 9.4 142 295-444 22-170 (359)
154 cd05032 PTKc_InsR_like Catalyt 99.9 9.9E-23 2.1E-27 193.2 12.7 148 294-444 5-164 (277)
155 cd05115 PTKc_Zap-70 Catalytic 99.9 2.1E-22 4.5E-27 189.2 14.6 135 303-444 3-140 (257)
156 cd05607 STKc_GRK7 Catalytic do 99.9 1.9E-22 4.1E-27 191.6 14.5 137 303-444 1-140 (277)
157 cd06646 STKc_MAP4K5 Catalytic 99.9 1.9E-22 4.2E-27 190.2 14.5 142 295-444 9-151 (267)
158 cd05052 PTKc_Abl Catalytic dom 99.9 1.8E-22 3.9E-27 190.1 14.1 143 295-444 6-149 (263)
159 PTZ00283 serine/threonine prot 99.9 5E-23 1.1E-27 210.8 11.1 149 293-444 30-188 (496)
160 cd05051 PTKc_DDR Catalytic dom 99.9 2E-22 4.3E-27 193.1 14.6 148 294-444 4-175 (296)
161 cd05039 PTKc_Csk_like Catalyti 99.9 2.1E-22 4.5E-27 188.8 14.4 143 294-444 5-147 (256)
162 cd05063 PTKc_EphR_A2 Catalytic 99.9 1.8E-22 3.9E-27 190.6 14.0 145 294-444 4-152 (268)
163 cd07862 STKc_CDK6 Catalytic do 99.9 2.1E-22 4.6E-27 192.4 14.6 143 296-444 2-155 (290)
164 KOG0599 Phosphorylase kinase g 99.9 2.1E-23 4.5E-28 185.7 6.9 145 293-444 15-168 (411)
165 cd05057 PTKc_EGFR_like Catalyt 99.9 2E-22 4.3E-27 191.5 14.2 143 295-444 7-154 (279)
166 cd05034 PTKc_Src_like Catalyti 99.9 2.1E-22 4.5E-27 189.3 14.0 145 293-444 4-148 (261)
167 cd05043 PTK_Ryk Pseudokinase d 99.9 1.5E-22 3.2E-27 192.5 13.1 149 293-444 4-162 (280)
168 cd05067 PTKc_Lck_Blk Catalytic 99.9 2.1E-22 4.5E-27 189.3 14.0 144 293-444 4-147 (260)
169 cd05080 PTKc_Tyk2_rpt2 Catalyt 99.9 1.7E-22 3.7E-27 192.4 13.6 139 298-444 7-152 (283)
170 cd06619 PKc_MKK5 Catalytic dom 99.9 1.9E-22 4.1E-27 191.8 13.8 138 296-444 2-140 (279)
171 cd05076 PTK_Tyk2_rpt1 Pseudoki 99.9 1.4E-22 3.1E-27 192.2 12.8 136 302-444 2-169 (274)
172 KOG0032 Ca2+/calmodulin-depend 99.9 1.3E-22 2.9E-27 198.3 12.8 144 294-445 34-185 (382)
173 cd05071 PTKc_Src Catalytic dom 99.9 2.7E-22 5.8E-27 189.0 14.5 143 294-444 5-147 (262)
174 KOG2345 Serine/threonine prote 99.9 2.6E-23 5.5E-28 182.9 6.9 151 293-445 19-175 (302)
175 cd05632 STKc_GRK5 Catalytic do 99.9 1.8E-22 3.8E-27 192.7 13.2 143 297-444 2-147 (285)
176 cd05055 PTKc_PDGFR Catalytic d 99.9 1.8E-22 3.9E-27 194.3 13.3 147 293-444 33-186 (302)
177 cd05047 PTKc_Tie Catalytic dom 99.9 3.9E-22 8.4E-27 188.7 15.3 141 301-444 1-157 (270)
178 cd05075 PTKc_Axl Catalytic dom 99.9 3.1E-22 6.8E-27 189.3 14.7 144 298-444 2-157 (272)
179 cd05099 PTKc_FGFR4 Catalytic d 99.9 2E-22 4.3E-27 195.1 13.5 149 294-445 11-180 (314)
180 cd08229 STKc_Nek7 Catalytic do 99.9 1.7E-22 3.7E-27 190.5 12.8 147 295-444 2-151 (267)
181 cd07844 STKc_PCTAIRE_like Cata 99.9 2.1E-22 4.6E-27 192.5 13.5 143 295-444 5-148 (291)
182 cd05100 PTKc_FGFR3 Catalytic d 99.9 2E-22 4.4E-27 196.8 13.6 148 294-444 11-179 (334)
183 cd05036 PTKc_ALK_LTK Catalytic 99.9 2E-22 4.4E-27 191.3 13.2 149 293-444 4-164 (277)
184 cd06631 STKc_YSK4 Catalytic do 99.9 2.6E-22 5.6E-27 189.2 13.8 142 296-444 1-147 (265)
185 cd05070 PTKc_Fyn_Yrk Catalytic 99.9 3.3E-22 7.1E-27 188.0 14.4 143 294-444 5-147 (260)
186 cd05586 STKc_Sck1_like Catalyt 99.9 1.9E-22 4.2E-27 196.6 13.2 135 303-444 1-141 (330)
187 cd05610 STKc_MASTL Catalytic d 99.9 1.7E-22 3.7E-27 213.8 13.7 143 295-444 4-149 (669)
188 KOG4250 TANK binding protein k 99.9 5.4E-23 1.2E-27 204.7 9.2 143 299-445 17-170 (732)
189 cd05093 PTKc_TrkB Catalytic do 99.9 3.3E-22 7.1E-27 191.1 14.3 146 295-444 5-165 (288)
190 KOG1025 Epidermal growth facto 99.9 1.9E-22 4.2E-27 202.7 13.1 139 300-445 701-844 (1177)
191 cd05037 PTK_Jak_rpt1 Pseudokin 99.9 3.1E-22 6.8E-27 187.7 13.9 136 301-445 1-154 (259)
192 cd06617 PKc_MKK3_6 Catalytic d 99.9 2.3E-22 5E-27 191.3 13.1 147 295-444 1-149 (283)
193 cd05630 STKc_GRK6 Catalytic do 99.9 2.7E-22 5.9E-27 191.4 13.6 143 297-444 2-147 (285)
194 cd05091 PTKc_Ror2 Catalytic do 99.9 1.7E-22 3.7E-27 192.4 12.1 146 296-444 6-169 (283)
195 cd08219 STKc_Nek3 Catalytic do 99.9 4.3E-22 9.3E-27 186.6 14.4 144 296-444 1-145 (255)
196 cd05035 PTKc_Axl_like Catalyti 99.9 6E-22 1.3E-26 187.3 15.1 146 297-445 1-159 (273)
197 cd06638 STKc_myosinIIIA Cataly 99.9 1.9E-22 4.2E-27 192.2 11.8 154 286-444 9-169 (286)
198 PHA03209 serine/threonine kina 99.9 3.8E-22 8.3E-27 196.6 14.2 139 292-444 63-202 (357)
199 cd06622 PKc_MAPKK_PBS2_like Ca 99.9 2.4E-22 5.3E-27 191.6 12.4 147 295-444 1-148 (286)
200 KOG0612 Rho-associated, coiled 99.9 2.1E-23 4.5E-28 216.2 5.2 153 286-445 66-221 (1317)
201 cd07870 STKc_PFTAIRE2 Catalyti 99.9 3.1E-22 6.8E-27 191.4 13.1 144 294-444 4-148 (291)
202 cd06625 STKc_MEKK3_like Cataly 99.9 5.2E-22 1.1E-26 186.7 14.2 143 295-444 2-149 (263)
203 cd05069 PTKc_Yes Catalytic dom 99.9 6.7E-22 1.5E-26 185.9 14.9 142 295-444 6-147 (260)
204 cd08529 STKc_FA2-like Catalyti 99.9 5.5E-22 1.2E-26 185.7 14.2 144 296-444 1-146 (256)
205 KOG4278 Protein tyrosine kinas 99.9 4.6E-23 9.9E-28 201.4 6.9 145 293-444 265-410 (1157)
206 PF00069 Pkinase: Protein kina 99.9 1.3E-22 2.7E-27 190.4 9.6 142 297-445 1-144 (260)
207 cd00192 PTKc Catalytic domain 99.9 7.5E-22 1.6E-26 185.0 14.9 141 301-444 1-150 (262)
208 cd05580 STKc_PKA Catalytic dom 99.9 3.8E-22 8.2E-27 190.8 13.0 143 295-444 1-146 (290)
209 PHA03211 serine/threonine kina 99.9 3.3E-22 7.2E-27 202.0 13.2 136 295-444 169-305 (461)
210 cd07847 STKc_CDKL1_4 Catalytic 99.9 6.8E-22 1.5E-26 188.3 14.4 143 295-444 1-145 (286)
211 cd06620 PKc_MAPKK_Byr1_like Ca 99.9 3.5E-22 7.5E-27 190.5 12.3 144 295-444 5-149 (284)
212 cd05609 STKc_MAST Catalytic do 99.9 5.7E-22 1.2E-26 191.1 13.7 143 295-444 1-146 (305)
213 KOG4721 Serine/threonine prote 99.9 6.6E-23 1.4E-27 198.6 7.0 130 300-445 129-258 (904)
214 cd05038 PTKc_Jak_rpt2 Catalyti 99.9 6.4E-22 1.4E-26 188.2 13.9 144 295-444 4-154 (284)
215 cd08221 STKc_Nek9 Catalytic do 99.9 7.8E-22 1.7E-26 184.9 14.1 144 296-444 1-146 (256)
216 cd05073 PTKc_Hck Catalytic dom 99.9 6E-22 1.3E-26 186.3 13.4 143 294-444 5-147 (260)
217 cd06624 STKc_ASK Catalytic dom 99.9 4.9E-22 1.1E-26 187.7 12.8 149 291-444 4-154 (268)
218 cd07861 STKc_CDK1_euk Catalyti 99.9 7.4E-22 1.6E-26 188.0 14.1 144 296-444 1-146 (285)
219 cd06632 STKc_MEKK1_plant Catal 99.9 9.8E-22 2.1E-26 184.1 14.7 142 296-444 1-147 (258)
220 cd06611 STKc_SLK_like Catalyti 99.9 4.2E-22 9.1E-27 189.4 12.4 144 294-444 4-148 (280)
221 KOG0033 Ca2+/calmodulin-depend 99.9 4E-24 8.7E-29 187.5 -1.4 146 293-445 9-159 (355)
222 PTZ00036 glycogen synthase kin 99.9 3.6E-22 7.8E-27 201.9 12.4 142 294-444 65-216 (440)
223 cd05077 PTK_Jak1_rpt1 Pseudoki 99.9 9.2E-22 2E-26 185.4 14.4 137 301-444 1-157 (262)
224 cd05082 PTKc_Csk Catalytic dom 99.9 1.1E-21 2.3E-26 184.0 14.8 141 295-444 6-147 (256)
225 cd06656 STKc_PAK3 Catalytic do 99.9 7.2E-22 1.6E-26 189.6 13.8 141 295-444 19-160 (297)
226 cd06652 STKc_MEKK2 Catalytic d 99.9 7.4E-22 1.6E-26 186.1 13.6 143 295-444 2-151 (265)
227 cd05041 PTKc_Fes_like Catalyti 99.9 1E-21 2.2E-26 183.6 14.3 138 301-444 1-138 (251)
228 cd07841 STKc_CDK7 Catalytic do 99.9 8.1E-22 1.8E-26 189.1 14.0 142 296-444 1-147 (298)
229 KOG0589 Serine/threonine prote 99.9 1.4E-22 3.1E-27 195.9 8.8 146 295-445 4-152 (426)
230 cd07878 STKc_p38beta_MAPK11 Ca 99.9 5.5E-22 1.2E-26 194.4 13.0 143 293-444 13-163 (343)
231 cd06637 STKc_TNIK Catalytic do 99.9 5.3E-22 1.1E-26 187.7 12.4 145 293-444 4-156 (272)
232 cd05116 PTKc_Syk Catalytic dom 99.9 1.2E-21 2.7E-26 183.8 14.8 135 302-444 2-140 (257)
233 cd05040 PTKc_Ack_like Catalyti 99.9 8.8E-22 1.9E-26 184.6 13.7 138 301-444 1-142 (257)
234 cd06645 STKc_MAP4K3 Catalytic 99.9 4.7E-22 1E-26 187.6 12.0 142 295-444 9-151 (267)
235 cd06629 STKc_MAPKKK_Bck1_like 99.9 9E-22 1.9E-26 186.2 13.8 142 296-444 2-153 (272)
236 cd05110 PTKc_HER4 Catalytic do 99.9 9.2E-22 2E-26 189.4 14.0 143 295-444 7-154 (303)
237 cd06642 STKc_STK25-YSK1 Cataly 99.9 4.1E-22 8.9E-27 189.2 11.4 140 297-444 6-146 (277)
238 KOG0666 Cyclin C-dependent kin 99.9 1.1E-22 2.3E-27 184.3 6.9 147 294-444 23-181 (438)
239 cd05574 STKc_phototropin_like 99.9 9.2E-22 2E-26 190.5 14.0 145 295-444 1-148 (316)
240 cd06644 STKc_STK10_LOK Catalyt 99.9 1.2E-21 2.6E-26 187.5 14.6 143 295-444 12-155 (292)
241 KOG0201 Serine/threonine prote 99.9 4.3E-23 9.3E-28 195.1 4.5 143 296-445 14-157 (467)
242 cd05056 PTKc_FAK Catalytic dom 99.9 8.3E-22 1.8E-26 186.3 13.3 143 295-444 6-152 (270)
243 cd07846 STKc_CDKL2_3 Catalytic 99.9 4.6E-22 9.9E-27 189.6 11.6 143 295-444 1-145 (286)
244 cd05094 PTKc_TrkC Catalytic do 99.9 1.1E-21 2.4E-26 187.7 14.2 145 296-444 6-168 (291)
245 cd07836 STKc_Pho85 Catalytic d 99.9 1.1E-21 2.4E-26 186.7 14.1 144 296-444 1-145 (284)
246 PLN03150 hypothetical protein; 99.9 1.1E-21 2.5E-26 205.0 15.5 160 21-208 367-537 (623)
247 KOG0577 Serine/threonine prote 99.9 6.1E-23 1.3E-27 199.6 5.4 142 297-445 28-172 (948)
248 cd06654 STKc_PAK1 Catalytic do 99.9 8.2E-22 1.8E-26 189.2 13.2 141 295-444 20-161 (296)
249 cd05112 PTKc_Itk Catalytic dom 99.9 1.4E-21 3E-26 183.2 14.5 142 295-444 4-145 (256)
250 cd06639 STKc_myosinIIIB Cataly 99.9 4.6E-22 1E-26 190.2 11.4 154 286-444 13-173 (291)
251 cd05060 PTKc_Syk_like Catalyti 99.9 1.5E-21 3.2E-26 183.2 14.5 136 301-444 1-140 (257)
252 cd05058 PTKc_Met_Ron Catalytic 99.9 1.4E-21 3.1E-26 183.7 14.5 138 301-444 1-143 (262)
253 cd07876 STKc_JNK2 Catalytic do 99.9 6.6E-22 1.4E-26 195.1 12.7 142 293-444 19-168 (359)
254 cd06630 STKc_MEKK1 Catalytic d 99.9 1.2E-21 2.7E-26 184.7 13.6 143 296-445 1-150 (268)
255 cd06628 STKc_MAPKKK_Byr2_like 99.9 1.7E-21 3.6E-26 183.8 14.4 141 297-444 2-151 (267)
256 smart00219 TyrKc Tyrosine kina 99.9 2E-21 4.4E-26 181.9 14.8 143 297-444 1-148 (258)
257 PLN00113 leucine-rich repeat r 99.9 1.7E-21 3.8E-26 216.0 16.8 190 5-196 9-222 (968)
258 cd05578 STKc_Yank1 Catalytic d 99.9 6.1E-22 1.3E-26 185.8 11.2 142 296-444 1-145 (258)
259 KOG4257 Focal adhesion tyrosin 99.9 4E-22 8.7E-27 195.0 10.1 145 293-444 387-536 (974)
260 cd06640 STKc_MST4 Catalytic do 99.9 1.5E-21 3.2E-26 185.5 13.7 141 296-444 5-146 (277)
261 cd06641 STKc_MST3 Catalytic do 99.9 1.6E-21 3.5E-26 185.2 14.0 140 297-444 6-146 (277)
262 cd06621 PKc_MAPKK_Pek1_like Ca 99.9 1E-21 2.2E-26 187.6 12.6 147 295-444 1-150 (287)
263 cd06643 STKc_SLK Catalytic dom 99.9 1.7E-21 3.7E-26 185.5 13.9 141 297-444 7-148 (282)
264 cd06613 STKc_MAP4K3_like Catal 99.9 2.2E-21 4.7E-26 182.3 14.4 143 295-444 3-146 (262)
265 cd05083 PTKc_Chk Catalytic dom 99.9 1.8E-21 3.8E-26 182.4 13.6 140 295-444 6-145 (254)
266 KOG0574 STE20-like serine/thre 99.9 3.6E-23 7.9E-28 186.4 2.0 140 297-445 35-175 (502)
267 cd06612 STKc_MST1_2 Catalytic 99.9 2.5E-21 5.4E-26 181.2 14.5 141 295-444 3-144 (256)
268 cd06609 STKc_MST3_like Catalyt 99.9 1.8E-21 3.8E-26 184.5 13.5 142 295-444 1-143 (274)
269 cd05092 PTKc_TrkA Catalytic do 99.9 2E-21 4.3E-26 184.9 13.9 146 295-444 5-167 (280)
270 cd06605 PKc_MAPKK Catalytic do 99.9 1.4E-21 3.1E-26 184.0 12.6 143 296-444 2-146 (265)
271 cd07874 STKc_JNK3 Catalytic do 99.9 9.3E-22 2E-26 193.8 11.6 142 293-444 15-164 (355)
272 cd06623 PKc_MAPKK_plant_like C 99.9 2.4E-21 5.3E-26 182.1 14.0 143 295-444 1-145 (264)
273 cd06626 STKc_MEKK4 Catalytic d 99.9 2.2E-21 4.8E-26 182.5 13.6 142 296-444 1-144 (264)
274 cd07863 STKc_CDK4 Catalytic do 99.9 1.8E-21 3.8E-26 185.8 12.9 143 296-444 1-153 (288)
275 cd05044 PTKc_c-ros Catalytic d 99.9 1.2E-21 2.7E-26 184.9 11.7 141 301-444 1-156 (269)
276 cd06917 STKc_NAK1_like Catalyt 99.9 2.5E-21 5.3E-26 183.7 13.7 141 296-444 2-146 (277)
277 KOG0667 Dual-specificity tyros 99.9 5.9E-22 1.3E-26 196.5 9.7 142 296-445 187-337 (586)
278 cd06651 STKc_MEKK3 Catalytic d 99.9 3.9E-21 8.5E-26 181.3 15.0 142 296-444 3-151 (266)
279 PHA03207 serine/threonine kina 99.9 1.3E-21 2.8E-26 195.3 12.2 137 294-444 91-230 (392)
280 cd05613 STKc_MSK1_N N-terminal 99.9 2.5E-21 5.5E-26 185.0 13.7 142 296-444 1-150 (290)
281 cd05078 PTK_Jak2_Jak3_rpt1 Pse 99.9 9.2E-22 2E-26 184.8 10.4 137 301-444 1-153 (258)
282 cd06610 STKc_OSR1_SPAK Catalyt 99.9 3.9E-21 8.4E-26 181.0 14.6 146 295-444 1-147 (267)
283 cd08218 STKc_Nek1 Catalytic do 99.9 2.7E-21 5.9E-26 181.2 13.5 144 296-444 1-146 (256)
284 cd07832 STKc_CCRK Catalytic do 99.9 2.7E-21 5.8E-26 184.2 13.6 142 296-444 1-144 (286)
285 cd07875 STKc_JNK1 Catalytic do 99.9 2E-21 4.3E-26 192.1 13.1 141 294-444 23-171 (364)
286 cd07860 STKc_CDK2_3 Catalytic 99.9 2.2E-21 4.7E-26 184.8 12.8 143 296-444 1-145 (284)
287 PRK09188 serine/threonine prot 99.9 2.1E-21 4.4E-26 188.4 12.7 135 292-444 15-157 (365)
288 cd07839 STKc_CDK5 Catalytic do 99.9 1.5E-21 3.2E-26 185.9 11.6 142 296-444 1-144 (284)
289 PTZ00266 NIMA-related protein 99.9 1.1E-21 2.4E-26 208.5 11.7 153 292-444 10-187 (1021)
290 cd06655 STKc_PAK2 Catalytic do 99.9 2.6E-21 5.5E-26 185.7 12.8 141 295-444 19-160 (296)
291 cd07843 STKc_CDC2L1 Catalytic 99.9 2.6E-21 5.6E-26 185.3 12.8 143 295-444 5-151 (293)
292 cd08217 STKc_Nek2 Catalytic do 99.9 3.7E-21 7.9E-26 180.8 13.2 149 296-444 1-155 (265)
293 KOG0986 G protein-coupled rece 99.9 4E-22 8.6E-27 188.8 6.4 148 292-444 182-332 (591)
294 cd06653 STKc_MEKK3_like_1 Cata 99.9 4.7E-21 1E-25 180.6 13.7 143 295-444 2-151 (264)
295 cd07837 STKc_CdkB_plant Cataly 99.9 4.2E-21 9.1E-26 183.8 13.6 146 295-444 1-156 (295)
296 cd07868 STKc_CDK8 Catalytic do 99.9 5.1E-21 1.1E-25 185.3 14.4 138 300-444 6-157 (317)
297 cd05577 STKc_GRK Catalytic dom 99.9 4.8E-21 1E-25 181.9 13.8 137 303-444 1-140 (277)
298 cd05074 PTKc_Tyro3 Catalytic d 99.9 7E-21 1.5E-25 180.1 14.8 145 297-444 1-158 (273)
299 KOG4236 Serine/threonine prote 99.9 2.6E-21 5.7E-26 186.0 11.9 139 300-444 569-712 (888)
300 cd06608 STKc_myosinIII_like Ca 99.9 5.8E-21 1.3E-25 180.5 14.0 147 293-444 4-158 (275)
301 cd05633 STKc_GRK3 Catalytic do 99.9 5.1E-21 1.1E-25 182.0 13.6 136 302-444 1-142 (279)
302 cd06658 STKc_PAK5 Catalytic do 99.9 2.6E-21 5.6E-26 185.3 11.5 136 300-444 27-163 (292)
303 cd08223 STKc_Nek4 Catalytic do 99.9 6E-21 1.3E-25 178.8 13.7 144 296-444 1-147 (257)
304 cd08226 PK_STRAD_beta Pseudoki 99.9 4.5E-21 9.9E-26 186.7 13.3 139 301-444 4-146 (328)
305 KOG0690 Serine/threonine prote 99.9 3.7E-22 8E-27 181.7 5.1 145 293-444 166-313 (516)
306 cd08528 STKc_Nek10 Catalytic d 99.9 6.4E-21 1.4E-25 180.1 13.8 147 296-445 1-160 (269)
307 cd07864 STKc_CDK12 Catalytic d 99.9 5.5E-21 1.2E-25 183.7 13.4 146 292-444 4-161 (302)
308 cd05147 RIO1_euk RIO kinase fa 99.9 3.1E-21 6.6E-26 172.2 10.7 136 300-445 2-163 (190)
309 cd06614 STKc_PAK Catalytic dom 99.9 8.7E-21 1.9E-25 180.9 14.5 144 293-444 17-161 (286)
310 cd05579 STKc_MAST_like Catalyt 99.9 4.1E-21 8.8E-26 180.5 11.9 135 303-444 1-138 (265)
311 cd06647 STKc_PAK_I Catalytic d 99.8 6E-21 1.3E-25 182.9 13.3 141 295-444 19-160 (293)
312 cd07849 STKc_ERK1_2_like Catal 99.8 3.8E-21 8.2E-26 187.9 11.9 142 294-444 4-151 (336)
313 cd06659 STKc_PAK6 Catalytic do 99.8 5E-21 1.1E-25 183.8 12.4 136 300-444 26-162 (297)
314 cd06636 STKc_MAP4K4_6 Catalyti 99.8 5.4E-21 1.2E-25 181.9 12.4 152 286-444 7-166 (282)
315 cd07842 STKc_CDK8_like Catalyt 99.8 9.2E-21 2E-25 183.2 14.0 145 296-444 1-157 (316)
316 cd07833 STKc_CDKL Catalytic do 99.8 5E-21 1.1E-25 182.5 12.0 142 296-444 2-145 (288)
317 cd08220 STKc_Nek8 Catalytic do 99.8 9E-21 1.9E-25 177.5 13.4 144 296-444 1-147 (256)
318 cd06607 STKc_TAO Catalytic dom 99.8 1E-20 2.2E-25 182.5 14.0 143 295-444 15-160 (307)
319 cd05572 STKc_cGK_PKG Catalytic 99.8 9.5E-21 2.1E-25 178.2 13.4 135 303-444 1-138 (262)
320 cd08215 STKc_Nek Catalytic dom 99.8 1.4E-20 3.1E-25 175.9 14.4 146 296-444 1-148 (258)
321 KOG0584 Serine/threonine prote 99.8 1.8E-21 3.9E-26 191.6 8.2 140 300-444 45-191 (632)
322 cd07831 STKc_MOK Catalytic dom 99.8 1.1E-20 2.5E-25 179.5 13.6 140 297-444 1-144 (282)
323 cd08225 STKc_Nek5 Catalytic do 99.8 8.5E-21 1.8E-25 177.7 12.4 144 296-444 1-147 (257)
324 cd06627 STKc_Cdc7_like Catalyt 99.8 2E-20 4.3E-25 174.7 14.6 142 296-444 1-144 (254)
325 cd07845 STKc_CDK10 Catalytic d 99.8 1.1E-20 2.4E-25 182.3 13.3 144 294-444 6-153 (309)
326 cd07830 STKc_MAK_like Catalyti 99.8 9.1E-21 2E-25 180.3 12.4 142 297-444 1-144 (283)
327 cd07877 STKc_p38alpha_MAPK14 C 99.8 1E-20 2.2E-25 185.7 12.8 151 285-444 7-165 (345)
328 cd07865 STKc_CDK9 Catalytic do 99.8 1.2E-20 2.5E-25 181.9 13.1 144 294-444 11-164 (310)
329 cd07880 STKc_p38gamma_MAPK12 C 99.8 1.1E-20 2.3E-25 185.3 12.7 143 293-444 13-163 (343)
330 cd05581 STKc_PDK1 Catalytic do 99.8 7.6E-21 1.6E-25 180.3 11.3 143 295-444 1-147 (280)
331 cd07840 STKc_CDK9_like Catalyt 99.8 1.5E-20 3.3E-25 178.9 13.3 141 297-444 1-145 (287)
332 cd08530 STKc_CNK2-like Catalyt 99.8 9.7E-21 2.1E-25 177.1 11.5 146 296-444 1-148 (256)
333 KOG1035 eIF-2alpha kinase GCN2 99.8 1.8E-21 3.8E-26 203.6 7.0 145 294-444 478-742 (1351)
334 cd07867 STKc_CDC2L6 Catalytic 99.8 2E-20 4.4E-25 181.1 14.1 137 301-444 7-157 (317)
335 cd05606 STKc_beta_ARK Catalyti 99.8 2.4E-20 5.2E-25 177.3 14.3 136 302-444 1-142 (278)
336 PTZ00284 protein kinase; Provi 99.8 5.9E-21 1.3E-25 194.9 10.7 145 290-444 124-293 (467)
337 KOG0199 ACK and related non-re 99.8 2.4E-21 5.1E-26 191.9 7.3 139 300-444 115-257 (1039)
338 cd07855 STKc_ERK5 Catalytic do 99.8 9.6E-21 2.1E-25 184.9 11.5 142 295-444 5-152 (334)
339 PLN00009 cyclin-dependent kina 99.8 2.5E-20 5.5E-25 178.4 14.2 144 295-444 2-148 (294)
340 cd07835 STKc_CDK1_like Catalyt 99.8 2.1E-20 4.5E-25 177.9 13.3 142 297-444 1-144 (283)
341 cd08216 PK_STRAD Pseudokinase 99.8 1.6E-20 3.5E-25 181.5 12.5 137 302-444 9-146 (314)
342 cd05122 PKc_STE Catalytic doma 99.8 4.1E-20 8.9E-25 172.0 14.7 142 296-444 1-143 (253)
343 cd06635 STKc_TAO1 Catalytic do 99.8 3.1E-20 6.7E-25 180.0 14.3 141 297-444 27-170 (317)
344 cd06648 STKc_PAK_II Catalytic 99.8 3.4E-20 7.4E-25 176.9 14.4 139 297-444 21-160 (285)
345 cd05611 STKc_Rim15_like Cataly 99.8 2.8E-20 6E-25 174.8 13.4 137 301-444 2-142 (260)
346 cd05583 STKc_MSK_N N-terminal 99.8 1.6E-20 3.6E-25 179.2 11.8 142 296-444 1-150 (288)
347 KOG4279 Serine/threonine prote 99.8 7.5E-21 1.6E-25 188.1 9.6 138 301-445 581-722 (1226)
348 cd06606 STKc_MAPKKK Catalytic 99.8 3.4E-20 7.4E-25 173.3 13.7 142 296-444 1-146 (260)
349 KOG4717 Serine/threonine prote 99.8 6.5E-21 1.4E-25 182.9 8.8 143 296-444 19-164 (864)
350 KOG0608 Warts/lats-like serine 99.8 4.8E-21 1E-25 187.8 7.9 142 296-444 630-774 (1034)
351 cd06618 PKc_MKK7 Catalytic dom 99.8 2.7E-20 5.8E-25 178.6 12.9 145 294-444 14-160 (296)
352 cd07856 STKc_Sty1_Hog1 Catalyt 99.8 1.9E-20 4.2E-25 182.3 12.1 145 291-444 6-153 (328)
353 KOG0579 Ste20-like serine/thre 99.8 8.2E-22 1.8E-26 193.0 2.4 141 298-445 35-176 (1187)
354 PLN03224 probable serine/threo 99.8 1.7E-20 3.7E-25 189.7 11.9 149 293-444 143-354 (507)
355 cd07850 STKc_JNK Catalytic dom 99.8 2.8E-20 6.1E-25 183.1 13.2 142 293-444 14-163 (353)
356 cd05145 RIO1_like RIO kinase f 99.8 3.8E-20 8.3E-25 165.6 12.7 134 300-444 2-162 (190)
357 cd07852 STKc_MAPK15 Catalytic 99.8 2.3E-20 5E-25 182.4 12.3 142 294-444 6-152 (337)
358 PHA03390 pk1 serine/threonine- 99.8 6.1E-20 1.3E-24 173.5 14.7 144 288-444 7-155 (267)
359 PHA03210 serine/threonine kina 99.8 1.2E-20 2.7E-25 193.6 10.6 148 293-444 146-312 (501)
360 PTZ00024 cyclin-dependent prot 99.8 4.3E-20 9.3E-25 180.4 13.9 141 296-444 9-164 (335)
361 cd06657 STKc_PAK4 Catalytic do 99.8 3.2E-20 6.8E-25 177.8 12.5 135 301-444 26-161 (292)
362 cd06616 PKc_MKK4 Catalytic dom 99.8 2.6E-20 5.5E-25 177.8 11.1 146 296-444 5-153 (288)
363 cd08222 STKc_Nek11 Catalytic d 99.8 2.7E-20 5.9E-25 174.9 10.9 145 296-444 1-150 (260)
364 cd07858 STKc_TEY_MAPK_plant Ca 99.8 3.5E-20 7.7E-25 181.2 12.1 142 295-444 5-153 (337)
365 KOG4645 MAPKKK (MAP kinase kin 99.8 3.6E-21 7.7E-26 202.3 4.6 145 295-446 1235-1381(1509)
366 cd07834 STKc_MAPK Catalytic do 99.8 4E-20 8.7E-25 180.1 11.5 141 296-444 1-148 (330)
367 cd06633 STKc_TAO3 Catalytic do 99.8 1.3E-19 2.9E-24 175.2 15.0 141 297-444 23-166 (313)
368 cd07879 STKc_p38delta_MAPK13 C 99.8 6.2E-20 1.3E-24 179.9 12.5 141 294-444 14-162 (342)
369 cd05118 STKc_CMGC Catalytic do 99.8 7.5E-20 1.6E-24 173.8 12.5 141 297-444 1-143 (283)
370 cd05123 STKc_AGC Catalytic dom 99.8 1E-19 2.2E-24 169.7 13.0 135 303-444 1-138 (250)
371 KOG0984 Mitogen-activated prot 99.8 1.7E-20 3.6E-25 161.0 7.0 152 290-444 41-194 (282)
372 cd07866 STKc_BUR1 Catalytic do 99.8 5.4E-20 1.2E-24 177.4 11.4 144 294-444 7-160 (311)
373 cd06634 STKc_TAO2 Catalytic do 99.8 1.1E-19 2.4E-24 175.4 13.0 141 297-444 17-160 (308)
374 cd07829 STKc_CDK_like Catalyti 99.8 9.5E-20 2.1E-24 173.0 12.1 141 297-444 1-143 (282)
375 cd07838 STKc_CDK4_6_like Catal 99.8 1.6E-19 3.6E-24 171.9 13.7 142 297-444 1-152 (287)
376 cd07857 STKc_MPK1 Catalytic do 99.8 1.1E-19 2.4E-24 177.3 12.8 141 296-444 1-150 (332)
377 KOG1152 Signal transduction se 99.8 4.1E-20 8.9E-25 179.8 9.5 144 295-445 561-716 (772)
378 KOG0587 Traf2- and Nck-interac 99.8 7.3E-20 1.6E-24 186.0 11.6 151 288-445 12-169 (953)
379 PRK10345 hypothetical protein; 99.8 2.1E-19 4.5E-24 162.0 12.4 133 298-444 5-154 (210)
380 cd05576 STKc_RPK118_like Catal 99.8 1.8E-19 3.8E-24 167.2 11.7 126 306-444 4-130 (237)
381 KOG0669 Cyclin T-dependent kin 99.8 1.1E-21 2.3E-26 173.0 -3.0 142 297-445 19-170 (376)
382 cd07854 STKc_MAPK4_6 Catalytic 99.8 1.7E-19 3.6E-24 176.8 11.1 140 295-444 5-160 (342)
383 cd07851 STKc_p38 Catalytic dom 99.8 1.2E-19 2.7E-24 177.8 10.1 143 293-444 13-163 (343)
384 KOG1151 Tousled-like protein k 99.8 3.8E-20 8.3E-25 174.8 5.9 145 295-444 463-618 (775)
385 KOG0604 MAP kinase-activated p 99.8 3E-20 6.4E-25 167.8 4.8 140 294-444 60-209 (400)
386 KOG0200 Fibroblast/platelet-de 99.8 4.8E-19 1E-23 185.0 11.9 152 290-444 291-463 (609)
387 KOG0696 Serine/threonine prote 99.8 6.1E-20 1.3E-24 172.1 3.9 145 293-444 347-495 (683)
388 KOG1006 Mitogen-activated prot 99.8 1.8E-20 3.9E-25 166.6 0.2 142 300-444 69-213 (361)
389 KOG0983 Mitogen-activated prot 99.8 4.3E-19 9.3E-24 158.4 8.2 148 284-444 88-237 (391)
390 KOG0668 Casein kinase II, alph 99.8 9.6E-20 2.1E-24 158.7 3.8 136 294-443 37-177 (338)
391 PHA02882 putative serine/threo 99.8 1.8E-18 3.8E-23 165.9 12.8 143 294-444 11-171 (294)
392 KOG0576 Mitogen-activated prot 99.8 6.7E-20 1.5E-24 181.1 2.5 144 294-445 14-158 (829)
393 smart00221 STYKc Protein kinas 99.8 4.8E-18 1E-22 155.4 13.7 142 297-444 1-143 (225)
394 cd00180 PKc Catalytic domain o 99.8 1.2E-17 2.6E-22 150.3 14.4 136 303-444 1-138 (215)
395 smart00090 RIO RIO-like kinase 99.7 5.8E-18 1.3E-22 156.2 11.1 137 296-444 29-193 (237)
396 KOG0664 Nemo-like MAPK-related 99.7 2.7E-19 5.8E-24 159.6 1.5 138 299-444 57-201 (449)
397 PRK14879 serine/threonine prot 99.7 1.6E-17 3.6E-22 151.1 12.3 131 301-444 2-139 (211)
398 KOG0614 cGMP-dependent protein 99.7 3.7E-19 8E-24 170.8 1.1 144 294-444 419-565 (732)
399 smart00220 S_TKc Serine/Threon 99.7 2.3E-17 4.9E-22 152.4 12.6 132 307-445 1-133 (244)
400 PLN03225 Serine/threonine-prot 99.7 5.6E-18 1.2E-22 175.4 9.3 144 293-444 130-301 (566)
401 KOG0695 Serine/threonine prote 99.7 3.2E-18 6.9E-23 156.7 6.3 145 293-444 248-396 (593)
402 cd05144 RIO2_C RIO kinase fami 99.7 2.2E-17 4.7E-22 148.9 10.8 133 296-445 16-171 (198)
403 KOG1345 Serine/threonine kinas 99.7 7E-18 1.5E-22 150.6 6.6 141 295-445 24-169 (378)
404 KOG1290 Serine/threonine prote 99.7 1.6E-17 3.5E-22 159.1 8.9 135 294-435 77-224 (590)
405 TIGR03724 arch_bud32 Kae1-asso 99.7 4.4E-17 9.6E-22 146.9 11.0 127 302-444 1-134 (199)
406 PRK12274 serine/threonine prot 99.7 6.6E-17 1.4E-21 143.3 11.6 129 298-445 5-138 (218)
407 PRK10359 lipopolysaccharide co 99.7 4.1E-17 8.9E-22 147.6 10.3 135 293-444 29-179 (232)
408 KOG1027 Serine/threonine prote 99.7 1.2E-17 2.6E-22 169.2 7.3 140 297-445 511-657 (903)
409 PRK09605 bifunctional UGMP fam 99.7 6.6E-17 1.4E-21 167.3 12.5 133 295-444 333-472 (535)
410 KOG0596 Dual specificity; seri 99.7 3.3E-17 7.2E-22 159.2 8.7 142 295-444 361-504 (677)
411 KOG0603 Ribosomal protein S6 k 99.7 3.1E-17 6.6E-22 162.6 7.3 140 293-445 320-462 (612)
412 KOG1024 Receptor-like protein 99.7 2.7E-16 5.8E-21 147.0 9.1 153 287-442 276-439 (563)
413 KOG1163 Casein kinase (serine/ 99.6 6.1E-16 1.3E-20 136.1 8.4 142 293-444 13-159 (341)
414 cd05120 APH_ChoK_like Aminogly 99.6 1.9E-15 4.1E-20 129.2 11.5 130 300-444 3-134 (155)
415 KOG0665 Jun-N-terminal kinase 99.6 2.7E-16 5.8E-21 143.7 5.8 138 296-444 18-163 (369)
416 KOG1167 Serine/threonine prote 99.6 7E-16 1.5E-20 145.9 8.7 141 291-444 32-178 (418)
417 cd05119 RIO RIO kinase family, 99.6 8.4E-16 1.8E-20 137.1 8.2 131 300-444 2-159 (187)
418 KOG1165 Casein kinase (serine/ 99.6 4E-15 8.7E-20 136.7 10.3 140 295-444 28-174 (449)
419 KOG1164 Casein kinase (serine/ 99.6 4.4E-15 9.5E-20 144.1 11.1 142 296-444 19-172 (322)
420 KOG0671 LAMMER dual specificit 99.6 2E-15 4.3E-20 141.1 7.4 134 294-435 88-228 (415)
421 PRK01723 3-deoxy-D-manno-octul 99.6 1.6E-14 3.6E-19 133.5 12.2 132 301-445 37-188 (239)
422 COG0515 SPS1 Serine/threonine 99.5 4.9E-14 1.1E-18 135.4 13.6 143 297-445 2-148 (384)
423 KOG0670 U4/U6-associated splic 99.5 3E-14 6.5E-19 137.8 7.3 146 293-445 430-583 (752)
424 KOG0617 Ras suppressor protein 99.5 2E-15 4.3E-20 126.3 -0.9 131 67-200 33-164 (264)
425 KOG1166 Mitotic checkpoint ser 99.5 4.1E-14 8.8E-19 149.8 5.9 146 290-446 693-848 (974)
426 TIGR01982 UbiB 2-polyprenylphe 99.4 2.3E-13 5E-18 136.6 9.3 136 300-444 122-302 (437)
427 KOG0195 Integrin-linked kinase 99.3 2.2E-13 4.9E-18 122.0 1.5 137 301-441 196-333 (448)
428 PLN03150 hypothetical protein; 99.3 1.7E-12 3.7E-17 136.2 7.3 91 92-182 419-509 (623)
429 PRK04750 ubiB putative ubiquin 99.3 1.3E-12 2.9E-17 132.8 5.5 139 295-444 120-309 (537)
430 cd05151 ChoK Choline Kinase (C 99.3 1E-11 2.3E-16 108.7 9.3 126 301-444 4-132 (170)
431 PLN00181 protein SPA1-RELATED; 99.2 5.6E-12 1.2E-16 137.0 4.3 89 348-443 28-124 (793)
432 KOG0617 Ras suppressor protein 99.2 4.2E-13 9E-18 112.6 -4.2 129 68-199 57-186 (264)
433 cd05154 ACAD10_11_like Acyl-Co 99.2 1.8E-10 3.9E-15 105.3 11.9 140 301-445 4-203 (223)
434 KOG4194 Membrane glycoprotein 99.2 4.7E-12 1E-16 124.4 0.2 130 68-197 270-403 (873)
435 KOG0590 Checkpoint kinase and 99.2 1.6E-11 3.4E-16 127.5 3.7 140 298-445 321-466 (601)
436 cd05146 RIO3_euk RIO kinase fa 99.1 4.1E-10 9E-15 99.9 11.5 133 301-446 3-171 (197)
437 KOG1240 Protein kinase contain 99.1 1.1E-11 2.4E-16 129.8 0.5 140 296-445 24-166 (1431)
438 KOG0472 Leucine-rich repeat pr 99.1 4.7E-12 1E-16 119.3 -2.3 124 69-198 185-309 (565)
439 KOG0603 Ribosomal protein S6 k 99.1 1.6E-11 3.5E-16 122.3 0.9 138 302-446 1-144 (612)
440 KOG4158 BRPK/PTEN-induced prot 99.1 6.3E-11 1.4E-15 111.8 3.9 87 349-444 273-390 (598)
441 PF14531 Kinase-like: Kinase-l 99.0 1.1E-09 2.4E-14 102.4 9.8 141 300-444 17-190 (288)
442 KOG0472 Leucine-rich repeat pr 99.0 2.1E-11 4.6E-16 115.0 -2.0 129 68-198 389-540 (565)
443 KOG4194 Membrane glycoprotein 99.0 4E-11 8.6E-16 118.0 -0.6 134 68-201 318-454 (873)
444 KOG0444 Cytoskeletal regulator 99.0 8E-11 1.7E-15 116.7 -0.9 106 68-176 79-186 (1255)
445 KOG0618 Serine/threonine phosp 98.9 9.3E-11 2E-15 121.1 -1.2 127 68-197 360-487 (1081)
446 KOG0444 Cytoskeletal regulator 98.9 1.2E-10 2.7E-15 115.4 -0.9 126 69-197 199-327 (1255)
447 PF14580 LRR_9: Leucine-rich r 98.9 1.4E-09 3E-14 94.7 4.7 105 68-177 20-127 (175)
448 PF13855 LRR_8: Leucine rich r 98.9 1.9E-09 4.2E-14 77.1 3.4 60 92-151 2-61 (61)
449 PRK15123 lipopolysaccharide co 98.8 3.1E-08 6.8E-13 92.8 11.9 139 301-445 28-191 (268)
450 PF13855 LRR_8: Leucine rich r 98.8 1.9E-09 4.1E-14 77.2 2.7 61 115-175 1-61 (61)
451 PF01163 RIO1: RIO1 family; I 98.8 3.2E-08 7E-13 87.5 10.6 123 310-446 1-153 (188)
452 COG3642 Mn2+-dependent serine/ 98.8 6.5E-08 1.4E-12 83.3 11.0 128 301-444 2-136 (204)
453 KOG3087 Serine/threonine prote 98.8 8E-08 1.7E-12 82.4 11.4 140 299-444 11-161 (229)
454 KOG1259 Nischarin, modulator o 98.8 1.5E-09 3.3E-14 99.0 0.7 123 69-197 286-410 (490)
455 PF08263 LRRNT_2: Leucine rich 98.8 1E-08 2.2E-13 67.4 4.2 40 25-64 2-43 (43)
456 KOG1023 Natriuretic peptide re 98.7 1.7E-08 3.6E-13 100.7 6.4 93 346-444 1-94 (484)
457 PF14580 LRR_9: Leucine-rich r 98.7 8E-09 1.7E-13 89.9 3.2 106 87-197 15-124 (175)
458 KOG4237 Extracellular matrix p 98.7 2.5E-09 5.4E-14 101.0 -0.2 135 67-201 67-203 (498)
459 KOG0532 Leucine-rich repeat (L 98.7 1.7E-09 3.6E-14 106.6 -2.1 106 69-179 145-250 (722)
460 PRK15387 E3 ubiquitin-protein 98.7 2E-08 4.4E-13 106.2 5.4 113 68-197 343-456 (788)
461 PRK15370 E3 ubiquitin-protein 98.7 3.1E-07 6.8E-12 97.7 13.8 96 69-176 180-275 (754)
462 COG0478 RIO-like serine/threon 98.6 2E-07 4.3E-12 85.1 9.9 133 298-446 94-249 (304)
463 KOG0590 Checkpoint kinase and 98.6 1.3E-08 2.9E-13 105.8 2.7 143 296-444 21-170 (601)
464 PRK15387 E3 ubiquitin-protein 98.6 5.2E-08 1.1E-12 103.1 6.9 52 139-197 382-433 (788)
465 PLN03210 Resistant to P. syrin 98.6 1.1E-07 2.3E-12 107.3 9.3 57 140-196 779-835 (1153)
466 KOG0601 Cyclin-dependent kinas 98.6 3.3E-08 7.1E-13 98.8 4.5 146 292-444 262-412 (524)
467 PLN03210 Resistant to P. syrin 98.6 1.1E-07 2.4E-12 107.2 9.1 124 67-195 778-902 (1153)
468 KOG1243 Protein kinase [Genera 98.6 1.9E-07 4.2E-12 94.4 9.4 117 316-444 34-150 (690)
469 KOG0618 Serine/threonine phosp 98.6 8E-09 1.7E-13 107.1 -0.5 104 67-174 383-487 (1081)
470 PRK15370 E3 ubiquitin-protein 98.6 8.2E-08 1.8E-12 102.0 6.6 98 68-177 200-297 (754)
471 PRK09902 hypothetical protein; 98.6 1.4E-06 3.1E-11 77.6 13.0 136 304-446 27-177 (216)
472 KOG4237 Extracellular matrix p 98.5 5.8E-08 1.3E-12 92.0 3.4 90 87-176 270-359 (498)
473 cd00116 LRR_RI Leucine-rich re 98.5 3.9E-08 8.5E-13 95.1 2.1 111 67-177 81-207 (319)
474 PF06293 Kdo: Lipopolysacchari 98.5 6.5E-07 1.4E-11 81.0 9.8 102 337-445 56-167 (206)
475 cd00116 LRR_RI Leucine-rich re 98.5 4.9E-08 1.1E-12 94.4 2.2 110 68-177 109-235 (319)
476 KOG0532 Leucine-rich repeat (L 98.5 2.1E-08 4.5E-13 99.0 -0.5 125 68-198 122-246 (722)
477 KOG1259 Nischarin, modulator o 98.5 2.4E-08 5.3E-13 91.3 -0.6 129 46-179 281-415 (490)
478 COG0661 AarF Predicted unusual 98.4 1E-06 2.2E-11 89.5 8.9 134 301-444 131-310 (517)
479 KOG1266 Protein kinase [Signal 98.4 2.3E-07 5E-12 86.2 3.6 95 346-441 121-220 (458)
480 TIGR02172 Fb_sc_TIGR02172 Fibr 98.3 6.5E-06 1.4E-10 75.5 12.1 73 300-378 6-80 (226)
481 COG4886 Leucine-rich repeat (L 98.3 3.6E-07 7.9E-12 91.3 4.1 104 68-175 117-221 (394)
482 KOG4579 Leucine-rich repeat (L 98.3 1.7E-07 3.6E-12 76.3 -0.2 104 69-176 29-136 (177)
483 KOG4579 Leucine-rich repeat (L 98.2 6.7E-08 1.4E-12 78.6 -3.0 111 67-181 53-164 (177)
484 KOG3741 Poly(A) ribonuclease s 98.2 6.3E-06 1.4E-10 81.3 9.9 129 309-441 290-435 (655)
485 KOG0606 Microtubule-associated 98.2 1E-06 2.2E-11 93.3 4.6 106 295-445 83-189 (1205)
486 KOG0601 Cyclin-dependent kinas 98.2 2.4E-06 5.2E-11 85.7 5.9 142 296-444 115-268 (524)
487 KOG1235 Predicted unusual prot 98.2 6.9E-06 1.5E-10 83.3 9.2 134 300-443 166-349 (538)
488 PLN02876 acyl-CoA dehydrogenas 98.2 2.2E-05 4.7E-10 85.8 13.6 79 300-378 43-130 (822)
489 KOG1859 Leucine-rich repeat pr 98.2 9.8E-08 2.1E-12 96.8 -4.3 121 74-201 171-294 (1096)
490 COG4886 Leucine-rich repeat (L 98.1 1.1E-06 2.4E-11 87.8 2.6 126 68-197 141-266 (394)
491 PF12260 PIP49_C: Protein-kina 98.1 1.3E-05 2.8E-10 71.1 8.1 99 340-443 7-106 (188)
492 smart00750 KIND kinase non-cat 98.0 6.9E-06 1.5E-10 72.0 5.6 52 377-440 1-52 (176)
493 PF12799 LRR_4: Leucine Rich r 98.0 4.5E-06 9.8E-11 54.9 3.1 36 92-128 2-37 (44)
494 PF12799 LRR_4: Leucine Rich r 98.0 5.3E-06 1.2E-10 54.6 2.8 38 115-153 1-38 (44)
495 PF01636 APH: Phosphotransfera 97.9 4.5E-05 9.7E-10 69.9 9.0 77 301-381 3-84 (239)
496 COG1718 RIO1 Serine/threonine 97.9 0.00012 2.7E-09 66.4 11.2 151 285-447 35-214 (268)
497 PRK10593 hypothetical protein; 97.9 0.00016 3.4E-09 69.3 12.7 76 300-379 19-100 (297)
498 cd05150 APH Aminoglycoside 3'- 97.9 0.00012 2.7E-09 67.9 11.8 76 302-382 5-82 (244)
499 PF10707 YrbL-PhoP_reg: PhoP r 97.9 0.00021 4.6E-09 63.8 11.9 130 300-443 6-166 (199)
500 PF06176 WaaY: Lipopolysacchar 97.9 6.5E-05 1.4E-09 67.4 8.4 134 293-444 29-179 (229)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=7e-46 Score=410.27 Aligned_cols=343 Identities=31% Similarity=0.560 Sum_probs=268.4
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|||++|+++|.+|..+.++++|+.|+|++|.+.+.+|..+.++++|++|+|++|.++|.+|..+.++++|+.|+|
T Consensus 475 ~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L 554 (968)
T PLN00113 475 KRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDL 554 (968)
T ss_pred ccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEEC
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccCCCCC---CCCCCCCCCCCCCCCCCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPNTK---KPCSGSPPFSPPPPFGPT 223 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~---~~C~~~~~~~~~~p~~~~ 223 (447)
++|+++|.+|..+..+++|+.+++++|+++|.+|..+.+..+...++.+|+.+|++... .+|..
T Consensus 555 s~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~------------- 621 (968)
T PLN00113 555 SQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKR------------- 621 (968)
T ss_pred CCCcccccCChhHhcCcccCEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCcc-------------
Confidence 99999999999999999999999999999999999999999999999999999986422 12210
Q ss_pred CCCCCCCCCcccchhhhhhHHHHHhhhhhhheeehhcCCCccccCCCCCC-cccccc---CccccccHHHHHHHhcCCCC
Q 013258 224 SSPGRNKSNAAIPVGVALGAALLFAVPVIGFAYWRRTRPHEFFFDVPAED-DSELQL---GQLKRFSLRELQVATDGFSN 299 (447)
Q Consensus 224 ~~~~~~~~~~~i~i~v~~g~~~lv~~~vi~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~ 299 (447)
.+......+.+++++++++++++++++++++|++++.+.. ..+... ..+... .....++++++ ...|..
T Consensus 622 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 694 (968)
T PLN00113 622 ---VRKTPSWWFYITCTLGAFLVLALVAFGFVFIRGRNNLELK-RVENEDGTWELQFFDSKVSKSITINDI---LSSLKE 694 (968)
T ss_pred ---ccccceeeeehhHHHHHHHHHHHHHHHHHHHHhhhccccc-ccccccccccccccccccchhhhHHHH---HhhCCc
Confidence 0111122233333333333333333333333333221110 000000 000000 01112333333 345778
Q ss_pred CCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 300 KNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
.++||+|+||.||+|+. .++..||||.++.... ...+|++.+++++|||||+++|+|.+.+..++||||+++|+
T Consensus 695 ~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~-----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~ 769 (968)
T PLN00113 695 ENVISRGKKGASYKGKSIKNGMQFVVKEINDVNS-----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKN 769 (968)
T ss_pred ccEEccCCCeeEEEEEECCCCcEEEEEEccCCcc-----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCc
Confidence 89999999999999996 4789999999864321 12356888999999999999999999999999999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
|.++++. ++|..+..|+.|+++||+|||+.+.++|+||||||+||+++.++.+++.
T Consensus 770 L~~~l~~-------l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~ 825 (968)
T PLN00113 770 LSEVLRN-------LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR 825 (968)
T ss_pred HHHHHhc-------CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE
Confidence 9999953 7899999999999999999997777799999999999999999988765
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-37 Score=301.71 Aligned_cols=161 Identities=53% Similarity=0.900 Sum_probs=148.7
Q ss_pred ccccccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE
Q 013258 281 QLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 360 (447)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 360 (447)
..+.|++.++..+|++|...+.||+|+||.||+|.+.+|+.||||++....... ..+|.+|++++++++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-EREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-hhHHHHHHHHHhcCCCcCcccEEEE
Confidence 456799999999999999999999999999999999989999999886654332 5679999999999999999999999
Q ss_pred EecCC-ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 361 CTTVT-EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 361 ~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
|.+.+ +.+||||||++|+|.++|+..... +++|.+|++||.++|+||+|||+.+.|+||||||||+|||||+++++|
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aK 217 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAK 217 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEE
Confidence 99998 499999999999999999986543 689999999999999999999999999999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 218 lsDFG 222 (361)
T KOG1187|consen 218 LSDFG 222 (361)
T ss_pred ccCcc
Confidence 99994
No 3
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.97 E-value=3.3e-31 Score=247.83 Aligned_cols=143 Identities=29% Similarity=0.418 Sum_probs=127.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|...+.||+|+||+||+|+++ ++..||||.+.... .......+..|+++|+.++|||||++++++..++..+||||
T Consensus 10 ~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVME 89 (429)
T KOG0595|consen 10 GDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVME 89 (429)
T ss_pred ccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEEE
Confidence 56777888999999999999965 58999999996553 22233457899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC------Cceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED------ADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~------~~~~i~df~ 444 (447)
||.+|||.++++.++. +++..+..++.|+|.||++||++ +||||||||+||||+.. -..||+||-
T Consensus 90 yC~gGDLs~yi~~~~~----l~e~t~r~Fm~QLA~alq~L~~~---~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFG 160 (429)
T KOG0595|consen 90 YCNGGDLSDYIRRRGR----LPEATARHFMQQLASALQFLHEN---NIIHRDLKPQNILLSTTARNDTSPVLKIADFG 160 (429)
T ss_pred eCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCcceEEeccCCCCCCCceEEecccc
Confidence 9999999999998753 89999999999999999999999 99999999999999975 357999994
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-29 Score=240.77 Aligned_cols=140 Identities=35% Similarity=0.580 Sum_probs=123.5
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC-ceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~~~g 377 (447)
.+.+|+|+||+||+|.++....||||++...... ....+|.+|+.+|.+++|||||+++|+|.++. ..++|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 4569999999999999975444999999654322 12458999999999999999999999999987 799999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC-eeecCCCCCceeeCCCC-ceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-IIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
+|.++++.. ....+++..++.++.|||+||.|||++ + ||||||||+|||++.++ .+||+||-
T Consensus 126 sL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~---~~iIHrDLK~~NiLv~~~~~~~KI~DFG 189 (362)
T KOG0192|consen 126 SLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSE---GPIIHRDLKSDNILVDLKGKTLKIADFG 189 (362)
T ss_pred cHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcC---CCeeecccChhhEEEcCCCCEEEECCCc
Confidence 999999874 223599999999999999999999999 6 99999999999999998 99999995
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=99.96 E-value=4.4e-29 Score=231.59 Aligned_cols=140 Identities=31% Similarity=0.433 Sum_probs=126.5
Q ss_pred CCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-ceEEEeecCCC
Q 013258 299 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVYPYMTN 376 (447)
Q Consensus 299 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~e~~~~ 376 (447)
..+.||+|..|+||+++++ +++.+|+|.+.........+++.+|++++..++||+||.++|.|.... +..++||||.+
T Consensus 83 ~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDg 162 (364)
T KOG0581|consen 83 RLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDG 162 (364)
T ss_pred hhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCC
Confidence 3578999999999999975 689999999965555555678999999999999999999999999988 59999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
|||+.++...+ .+++...-+|+.+|++||.|||+ + +||||||||+|||++..|++||+||-.
T Consensus 163 GSLd~~~k~~g----~i~E~~L~~ia~~VL~GL~YLh~~~---~IIHRDIKPsNlLvNskGeVKicDFGV 225 (364)
T KOG0581|consen 163 GSLDDILKRVG----RIPEPVLGKIARAVLRGLSYLHEER---KIIHRDIKPSNLLVNSKGEVKICDFGV 225 (364)
T ss_pred CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhcc---CeeeccCCHHHeeeccCCCEEeccccc
Confidence 99999998653 38899999999999999999996 5 899999999999999999999999965
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=3.8e-29 Score=233.87 Aligned_cols=143 Identities=27% Similarity=0.410 Sum_probs=125.8
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccc------cHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSG------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
+.|.+.+.||+|+||.|-+|. .++|+.||||++++..... ......+|+++|++++|||||++++++..++..
T Consensus 172 d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~ds~ 251 (475)
T KOG0615|consen 172 DYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPDSS 251 (475)
T ss_pred ceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCCce
Confidence 456777999999999999998 4579999999996543222 122467999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC---Cceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~~i~df~ 444 (447)
|||||||+||+|.+++-..+. +.+.....++.|++.|+.|||++ ||+||||||+|||+..+ ...||+||-
T Consensus 252 YmVlE~v~GGeLfd~vv~nk~----l~ed~~K~~f~Qll~avkYLH~~---GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 252 YMVLEYVEGGELFDKVVANKY----LREDLGKLLFKQLLTAVKYLHSQ---GIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred EEEEEEecCccHHHHHHhccc----cccchhHHHHHHHHHHHHHHHHc---CcccccCCcceEEeccCCcceEEEecccc
Confidence 999999999999999987653 77788899999999999999999 99999999999999877 678999995
No 7
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1.4e-28 Score=235.49 Aligned_cols=143 Identities=29% Similarity=0.486 Sum_probs=124.8
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEecC--CceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 370 (447)
+.|+..++||+|.||.||+|+ ..+|+.||+|+++.+...... ....+||.+|++++||||++|.+...+. ..+|||
T Consensus 117 ~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlV 196 (560)
T KOG0600|consen 117 DSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLV 196 (560)
T ss_pred HHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEE
Confidence 345566889999999999998 567999999999766544333 3568999999999999999999998876 689999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|||++ ||..++.... ..++..++..++.|++.||+|+|++ +|+|||||.+|||||.+|..||+||-
T Consensus 197 FeYMdh-DL~GLl~~p~---vkft~~qIKc~mkQLl~Gl~~cH~~---gvlHRDIK~SNiLidn~G~LKiaDFG 263 (560)
T KOG0600|consen 197 FEYMDH-DLSGLLSSPG---VKFTEPQIKCYMKQLLEGLEYCHSR---GVLHRDIKGSNILIDNNGVLKIADFG 263 (560)
T ss_pred Eecccc-hhhhhhcCCC---cccChHHHHHHHHHHHHHHHHHhhc---CeeeccccccceEEcCCCCEEecccc
Confidence 999987 8888887532 2389999999999999999999999 99999999999999999999999994
No 8
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=99.95 E-value=1.3e-28 Score=228.38 Aligned_cols=144 Identities=28% Similarity=0.392 Sum_probs=129.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|+..++||+|+||+||.++.+ +++.+|+|++++..... .......|..+|..++||.||+++-.|++.+.+|+|
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467899999999999999999854 58999999997654322 244588999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||+.||+|..+|++.+. +++..+..++..|+.||.|||++ +||||||||+|||||++|.++++||-
T Consensus 104 ld~~~GGeLf~hL~~eg~----F~E~~arfYlaEi~lAL~~LH~~---gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQREGR----FSEDRARFYLAEIVLALGYLHSK---GIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred EeccCCccHHHHHHhcCC----cchhHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHeeecCCCcEEEeccc
Confidence 999999999999986543 88999999999999999999999 99999999999999999999999994
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=9e-28 Score=235.26 Aligned_cols=143 Identities=28% Similarity=0.483 Sum_probs=130.1
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
..|...+.||+|+|+.||+++. .+|..||+|++.+.. .........+||++.+.++|||||+++++|++.++.|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4578889999999999999996 779999999996533 2334456899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+|+|.++++.++ +++++++.++..||+.||.|||+. +|||||||..|++|++++++||+||-
T Consensus 98 ELC~~~sL~el~Krrk----~ltEpEary~l~QIv~GlkYLH~~---~IiHRDLKLGNlfL~~~~~VKIgDFG 163 (592)
T KOG0575|consen 98 ELCHRGSLMELLKRRK----PLTEPEARYFLRQIVEGLKYLHSL---GIIHRDLKLGNLFLNENMNVKIGDFG 163 (592)
T ss_pred EecCCccHHHHHHhcC----CCCcHHHHHHHHHHHHHHHHHHhc---CceecccchhheeecCcCcEEecccc
Confidence 9999999999998543 499999999999999999999999 99999999999999999999999994
No 10
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.8e-27 Score=226.15 Aligned_cols=138 Identities=36% Similarity=0.531 Sum_probs=119.7
Q ss_pred CCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHh--cCCCCCccceeeEEecCC----ceEEE
Q 013258 297 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIIS--MAVHRNLLRLYGFCTTVT----EKLLV 370 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~~~~~~~~----~~~lv 370 (447)
.+..++||+|+||.||||++. ++.||||+++.. ....|..|-++.+ .++|+||++++++-...+ +.+||
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~----~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLV 286 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ----EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLV 286 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecCHH----HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEE
Confidence 344578999999999999984 599999999653 2345777777665 568999999999876655 78999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC------CCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH------CDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||.+.|+|.++|..+. .+|....+|+.-+++||+|||+. ++|+|+|||||++|||+.+|+...|+||-
T Consensus 287 t~fh~kGsL~dyL~~nt-----isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFG 361 (534)
T KOG3653|consen 287 TEFHPKGSLCDYLKANT-----ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFG 361 (534)
T ss_pred eeeccCCcHHHHHHhcc-----ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccc
Confidence 99999999999998763 89999999999999999999974 47899999999999999999999999995
No 11
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.95 E-value=2.8e-28 Score=227.14 Aligned_cols=142 Identities=23% Similarity=0.443 Sum_probs=129.1
Q ss_pred CCCCCCccccCCCceEEEEE-eCCCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+|++.+.||+|.||+|-+|+ ...|+.||||.+++....+. ...+.+|+++|+.++||||++++++|...+.+.+|||
T Consensus 54 RyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivME 133 (668)
T KOG0611|consen 54 RYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVME 133 (668)
T ss_pred HHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEE
Confidence 46666889999999999998 46799999999977653332 3358899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|..+|.|++++.+++. +++..+..++.||.+|+.|+|.+ +++|||||.+|||+|+++++||+||-
T Consensus 134 YaS~GeLYDYiSer~~----LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFG 198 (668)
T KOG0611|consen 134 YASGGELYDYISERGS----LSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFG 198 (668)
T ss_pred ecCCccHHHHHHHhcc----ccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccc
Confidence 9999999999998764 89999999999999999999999 99999999999999999999999995
No 12
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.95 E-value=1.3e-27 Score=211.92 Aligned_cols=143 Identities=27% Similarity=0.456 Sum_probs=127.8
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|...+.+|+|.||.||+|+ ..+|+.||||+++.....++ .....||+..|+.++|+||+.++++|-..+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 356677899999999999999 45799999999976654433 3468999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+. +|+..+++.. ..+...+...++.++++|++|+|++ .|+||||||.|+|++++|..||+||-
T Consensus 82 fm~t-dLe~vIkd~~---i~l~pa~iK~y~~m~LkGl~y~H~~---~IlHRDlKPnNLLis~~g~lKiADFG 146 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKN---IILSPADIKSYMLMTLKGLAYCHSK---WILHRDLKPNNLLISSDGQLKIADFG 146 (318)
T ss_pred eccc-cHHHHhcccc---cccCHHHHHHHHHHHHHHHHHHHhh---hhhcccCCccceEEcCCCcEEeeccc
Confidence 9976 9999998753 3578899999999999999999999 99999999999999999999999995
No 13
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95 E-value=1.4e-27 Score=231.39 Aligned_cols=138 Identities=36% Similarity=0.530 Sum_probs=125.8
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
.+.||+|-||+||.|.+.....||+|.++... .....|.+|+++|.+++|+|||+++|+|..++.++||||||+.|+|
T Consensus 211 ~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~--m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 211 IRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS--MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHhcCCccceEEEEEEcCCCcccceEEeccc--cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 46799999999999999877799999997753 3345799999999999999999999999998899999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++|+...+ ..+...+.+.++.|||+||+||+++ ++|||||.++|||++++..+||+||-
T Consensus 289 l~yLr~~~~--~~l~~~~Ll~~a~qIaeGM~YLes~---~~IHRDLAARNiLV~~~~~vKIsDFG 348 (468)
T KOG0197|consen 289 LDYLRTREG--GLLNLPQLLDFAAQIAEGMAYLESK---NYIHRDLAARNILVDEDLVVKISDFG 348 (468)
T ss_pred HHHhhhcCC--CccchHHHHHHHHHHHHHHHHHHhC---CccchhhhhhheeeccCceEEEcccc
Confidence 999997332 3488899999999999999999999 99999999999999999999999995
No 14
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=99.95 E-value=6.7e-28 Score=217.24 Aligned_cols=143 Identities=22% Similarity=0.347 Sum_probs=121.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+.|+....+|+|+||.||+|+.+ +|+.||||++.+...... .+-.+||+++|++++|+|+|.++++|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 34666788999999999999966 599999999965433222 3347899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+. ++.+.|..... .++......++.|+++|+.|+|++ +||||||||+|||++.++.+|++||.
T Consensus 82 ~~dh-TvL~eLe~~p~---G~~~~~vk~~l~Q~l~ai~~cHk~---n~IHRDIKPENILit~~gvvKLCDFG 146 (396)
T KOG0593|consen 82 YCDH-TVLHELERYPN---GVPSELVKKYLYQLLKAIHFCHKN---NCIHRDIKPENILITQNGVVKLCDFG 146 (396)
T ss_pred ecch-HHHHHHHhccC---CCCHHHHHHHHHHHHHHhhhhhhc---CeecccCChhheEEecCCcEEeccch
Confidence 9987 44444444322 278888999999999999999999 99999999999999999999999994
No 15
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=9.1e-28 Score=209.90 Aligned_cols=146 Identities=30% Similarity=0.432 Sum_probs=129.9
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|++.+.||+|.||.||.|+. +++-.||+|++-+.. ...-..++.+|+++-+.++||||.++++++.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 46788899999999999999995 468899999985433 223345799999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||..+|+++..|++... ..+++.....++.|+|.||.|+|.. +||||||||+|+|++.+++.|++||-
T Consensus 101 lEya~~gel~k~L~~~~~--~~f~e~~~a~Yi~q~A~Al~y~h~k---~VIhRdiKpenlLlg~~~~lkiAdfG 169 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEGRM--KRFDEQRAATYIKQLANALLYCHLK---RVIHRDIKPENLLLGSAGELKIADFG 169 (281)
T ss_pred EEecCCchHHHHHHhccc--ccccccchhHHHHHHHHHHHHhccC---CcccCCCCHHHhccCCCCCeeccCCC
Confidence 999999999999986432 3488889999999999999999999 99999999999999999999999995
No 16
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.94 E-value=2e-27 Score=229.31 Aligned_cols=147 Identities=27% Similarity=0.354 Sum_probs=128.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc--cHHHHHHHHHHHhcC-CCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 368 (447)
...+|...+.||+|+|++|++|+. .+++.||||++.+...-. ..+-..+|-..|.++ .||.|++|+-.|++...+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 346788899999999999999984 469999999985443211 122366788888888 8999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILRR 446 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~~ 446 (447)
+|+||+++|+|.++|+..+. +++.....++.+|+.||+|||++ +||||||||+|||||+||.++|.||...
T Consensus 151 FvLe~A~nGdll~~i~K~Gs----fde~caR~YAAeIldAleylH~~---GIIHRDlKPENILLd~dmhikITDFGsA 221 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKYGS----FDETCARFYAAEILDALEYLHSN---GIIHRDLKPENILLDKDGHIKITDFGSA 221 (604)
T ss_pred EEEEecCCCcHHHHHHHhCc----chHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeEcCCCcEEEeecccc
Confidence 99999999999999988653 99999999999999999999999 9999999999999999999999999754
No 17
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=99.94 E-value=1.1e-26 Score=208.83 Aligned_cols=143 Identities=27% Similarity=0.410 Sum_probs=127.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||.|+||+|..++.+ +|..+|+|+++....- .+.....+|..+|+.+.||.++++++.+.+.+..+|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 56778899999999999999965 5889999999654321 11224678999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++||.|+++|+..+. ++++.+..+|.||+.||+|||+. +|++|||||+|||+|.+|..||.||-
T Consensus 124 eyv~GGElFS~Lrk~~r----F~e~~arFYAAeivlAleylH~~---~iiYRDLKPENiLlD~~G~iKitDFG 189 (355)
T KOG0616|consen 124 EYVPGGELFSYLRKSGR----FSEPHARFYAAEIVLALEYLHSL---DIIYRDLKPENLLLDQNGHIKITDFG 189 (355)
T ss_pred eccCCccHHHHHHhcCC----CCchhHHHHHHHHHHHHHHHHhc---CeeeccCChHHeeeccCCcEEEEecc
Confidence 99999999999998654 99999999999999999999999 99999999999999999999999984
No 18
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.94 E-value=5.1e-27 Score=238.32 Aligned_cols=149 Identities=32% Similarity=0.509 Sum_probs=131.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
...+....+.||+|+||+||+|+.. +...||||.++.....+..++|++|+++++.++|||||+|+|+|.+++.
T Consensus 484 ~r~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P 563 (774)
T KOG1026|consen 484 PRSDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDP 563 (774)
T ss_pred chhheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCe
Confidence 3344555688999999999999853 3468999999887766677899999999999999999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCC----------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS----------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
.+||+|||..|||.++|+.+... ..+++..+.+.||.|||.||+||-++ .+|||||..+|+||.++.
T Consensus 564 ~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l 640 (774)
T KOG1026|consen 564 LCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENL 640 (774)
T ss_pred eEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccce
Confidence 99999999999999999864321 22378889999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+||+||.
T Consensus 641 ~VKIsDfG 648 (774)
T KOG1026|consen 641 VVKISDFG 648 (774)
T ss_pred EEEecccc
Confidence 99999995
No 19
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=9.4e-28 Score=214.25 Aligned_cols=148 Identities=25% Similarity=0.360 Sum_probs=127.1
Q ss_pred CCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceee-EEecCCc-eEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYG-FCTTVTE-KLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~-~~~~~~~-~~lv~ 371 (447)
+|++.+.||+|.||+||++. ..+|..+|.|.++-+.. ....++...|+.+|++++|||||++++ .+.+..+ .++||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46667889999999999998 56899999999973332 223446899999999999999999998 4455555 89999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC--eeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||..|+|...++..+.....+++..+.++..|+++||.++|.. -++ |+||||||.||+||.+|.+|++||.
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~-~~r~~VmHRDIKPaNIFl~~~gvvKLGDfG 173 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSK-IPRGTVMHRDIKPANIFLTANGVVKLGDFG 173 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhcc-ccccceeeccCcchheEEcCCCceeeccch
Confidence 99999999999988766666799999999999999999999994 234 9999999999999999999999984
No 20
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=99.94 E-value=2.6e-26 Score=221.73 Aligned_cols=147 Identities=21% Similarity=0.329 Sum_probs=131.2
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
....++|+.+++||+|+||+||.|+.+ +|..+|+|++++... .....-...|-.+|....+|+||+|+-.|++.+.+
T Consensus 137 r~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~L 216 (550)
T KOG0605|consen 137 RLSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYL 216 (550)
T ss_pred cCCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCee
Confidence 335578999999999999999999954 599999999976432 22223478899999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||||++|||+..+|...+. |++..+..++.+++.|++.+|.. |+|||||||+|+|||..|.+|++||.
T Consensus 217 YLiMEylPGGD~mTLL~~~~~----L~e~~arfYiaE~vlAI~~iH~~---gyIHRDIKPdNlLiD~~GHiKLSDFG 286 (550)
T KOG0605|consen 217 YLIMEYLPGGDMMTLLMRKDT----LTEDWARFYIAETVLAIESIHQL---GYIHRDIKPDNLLIDAKGHIKLSDFG 286 (550)
T ss_pred EEEEEecCCccHHHHHHhcCc----CchHHHHHHHHHHHHHHHHHHHc---CcccccCChhheeecCCCCEeecccc
Confidence 999999999999999987653 89999999999999999999999 99999999999999999999999995
No 21
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94 E-value=1.9e-27 Score=226.10 Aligned_cols=145 Identities=26% Similarity=0.371 Sum_probs=128.0
Q ss_pred HhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC-ceEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT-EKLL 369 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~-~~~l 369 (447)
..++|...+.||.|+||.||+|+ ..+|..||||+++..-..-.+..=.||+..|++++ |||||++.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 34677888999999999999998 45699999999976543333334579999999999 999999999998877 8999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||||+. +|+++++++. ..+++..+..|+.||.+||+|+|.+ |+.|||+||+|||+.....+||+||.
T Consensus 88 VfE~Md~-NLYqLmK~R~---r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFG 155 (538)
T KOG0661|consen 88 VFEFMDC-NLYQLMKDRN---RLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFG 155 (538)
T ss_pred eHHhhhh-hHHHHHhhcC---CcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEecccc
Confidence 9999965 9999998863 3599999999999999999999999 99999999999999999999999995
No 22
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=3.3e-26 Score=217.60 Aligned_cols=146 Identities=28% Similarity=0.374 Sum_probs=122.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc-------------ccHHHHHHHHHHHhcCCCCCcccee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-------------GGELQFQTEVKIISMAVHRNLLRLY 358 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-------------~~~~~~~~E~~~l~~l~H~niv~l~ 358 (447)
..+.|.+.+.||+|.||+|-+|+. .+++.||||++.+.... ....+..+||.+|++++|||||+|+
T Consensus 95 ~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~Li 174 (576)
T KOG0585|consen 95 QLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLI 174 (576)
T ss_pred ehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEE
Confidence 346788889999999999999995 46999999999643211 1123688999999999999999999
Q ss_pred eEEecC--CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 359 GFCTTV--TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 359 ~~~~~~--~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
++..++ +..|||+|||..|.+...=.. ...+++.++..|..++..||+|||.+ +||||||||+|+||+++|
T Consensus 175 EvLDDP~s~~~YlVley~s~G~v~w~p~d----~~els~~~Ar~ylrDvv~GLEYLH~Q---giiHRDIKPsNLLl~~~g 247 (576)
T KOG0585|consen 175 EVLDDPESDKLYLVLEYCSKGEVKWCPPD----KPELSEQQARKYLRDVVLGLEYLHYQ---GIIHRDIKPSNLLLSSDG 247 (576)
T ss_pred EeecCcccCceEEEEEeccCCccccCCCC----cccccHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEEcCCC
Confidence 998764 578999999999987543222 12288999999999999999999999 999999999999999999
Q ss_pred ceeeccccc
Q 013258 437 DQSSKTILR 445 (447)
Q Consensus 437 ~~~i~df~~ 445 (447)
.+||+||-.
T Consensus 248 ~VKIsDFGV 256 (576)
T KOG0585|consen 248 TVKISDFGV 256 (576)
T ss_pred cEEeeccce
Confidence 999999964
No 23
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.4e-26 Score=227.72 Aligned_cols=148 Identities=30% Similarity=0.468 Sum_probs=129.3
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeCC--C--cE-EEEEEccc--ccccccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLAD--G--KL-VAVKRLKE--ERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT 363 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~--~--~~-vavK~~~~--~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 363 (447)
+...++....++||+|+||+||+|++.. + .. ||||..+. ........+|+.|+++|+.++|||||+++|++..
T Consensus 153 el~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~ 232 (474)
T KOG0194|consen 153 ELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL 232 (474)
T ss_pred EEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence 4445555666899999999999998642 2 23 89999874 2334445689999999999999999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
...+++|||+|.||+|.++|+.... .++..++..++.++|+||+|||++ ++|||||.++|+|++.++.+||+||
T Consensus 233 ~~Pl~ivmEl~~gGsL~~~L~k~~~---~v~~~ek~~~~~~AA~Gl~YLh~k---~~IHRDIAARNcL~~~~~~vKISDF 306 (474)
T KOG0194|consen 233 EEPLMLVMELCNGGSLDDYLKKNKK---SLPTLEKLRFCYDAARGLEYLHSK---NCIHRDIAARNCLYSKKGVVKISDF 306 (474)
T ss_pred CCccEEEEEecCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHhHHHHHHHC---CCcchhHhHHHheecCCCeEEeCcc
Confidence 9999999999999999999998654 388999999999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 307 G 307 (474)
T KOG0194|consen 307 G 307 (474)
T ss_pred c
Confidence 5
No 24
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.3e-26 Score=214.81 Aligned_cols=146 Identities=26% Similarity=0.397 Sum_probs=133.2
Q ss_pred hcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||.|..+.||+|+ .+.+..||||++.-+........+.+|+..|+.++||||++++..|..+.++|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 4568888999999999999998 467899999999877666566789999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||.+||+.+.++..-.. .+++..+..|.+++++||.|||.+ +.||||||+.|||||+||.+|++||-
T Consensus 105 fMa~GS~ldIik~~~~~--Gl~E~~Ia~iLre~LkaL~YLH~~---G~IHRdvKAgnILi~~dG~VkLadFg 171 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD--GLEEASIATILREVLKALDYLHQN---GHIHRDVKAGNILIDSDGTVKLADFG 171 (516)
T ss_pred hhcCCcHHHHHHHHccc--cccHHHHHHHHHHHHHHHHHHHhc---CceecccccccEEEcCCCcEEEcCce
Confidence 99999999999875432 388999999999999999999999 99999999999999999999999994
No 25
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-26 Score=231.76 Aligned_cols=143 Identities=30% Similarity=0.437 Sum_probs=132.0
Q ss_pred CCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
...+.++||.|.||+||+|+++- ...||||.+|...+...+.+|+.|+.+|.++.||||++|.|+.......++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 34667999999999999999752 45799999998887777889999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+||+|+.+|+.+.+. +.+.+...+.++||.||.||-+. +.|||||.++|||++.+...||+||-
T Consensus 710 EyMENGsLDsFLR~~DGq---ftviQLVgMLrGIAsGMkYLsdm---~YVHRDLAARNILVNsnLvCKVsDFG 776 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQNDGQ---FTVIQLVGMLRGIASGMKYLSDM---NYVHRDLAARNILVNSNLVCKVSDFG 776 (996)
T ss_pred hhhhCCcHHHHHhhcCCc---eEeehHHHHHHHHHHHhHHHhhc---CchhhhhhhhheeeccceEEEecccc
Confidence 999999999999987643 88999999999999999999998 99999999999999999999999994
No 26
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=6.4e-26 Score=221.72 Aligned_cols=145 Identities=26% Similarity=0.382 Sum_probs=128.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc----ccHHHHHHHHHHHhcCC-CCCccceeeEEecCCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS----GGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 366 (447)
..+.|...+.||+|+||+||.|+. .++..||+|++...... .....+.+|+.+++.++ ||||+++++++.....
T Consensus 15 ~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~ 94 (370)
T KOG0583|consen 15 SIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTK 94 (370)
T ss_pred ccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCe
Confidence 456788899999999999999985 46899999977553211 22345778999999999 9999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~ 444 (447)
.++||||+.+|+|++++...+ .+.+..+..++.|+++|++|+|++ +|+||||||+|||+|.+ +++||+||.
T Consensus 95 ~~ivmEy~~gGdL~~~i~~~g----~l~E~~ar~~F~Qlisav~y~H~~---gi~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 95 IYIVMEYCSGGDLFDYIVNKG----RLKEDEARKYFRQLISAVAYCHSR---GIVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred EEEEEEecCCccHHHHHHHcC----CCChHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEecCCCCCEEEeccc
Confidence 999999999999999998843 388899999999999999999999 99999999999999999 999999995
No 27
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.93 E-value=2.6e-26 Score=209.53 Aligned_cols=143 Identities=27% Similarity=0.411 Sum_probs=124.4
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEec--CCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv 370 (447)
++|+..+.|++|+||.||+|+. ++++.||+|+++.+....+. ..-.+||.+|.+++|||||.+..+... -+..|+|
T Consensus 76 ~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~V 155 (419)
T KOG0663|consen 76 EEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIV 155 (419)
T ss_pred HHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeee
Confidence 3466678899999999999995 46899999999876544443 257899999999999999999887754 4679999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+. ||..++..... ++...++..+..|+++|++|||++ .|+|||||++|+|++..|..||+||-
T Consensus 156 Me~~Eh-DLksl~d~m~q---~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDFG 222 (419)
T KOG0663|consen 156 MEYVEH-DLKSLMETMKQ---PFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADFG 222 (419)
T ss_pred HHHHHh-hHHHHHHhccC---CCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEecccc
Confidence 999986 99999987642 488899999999999999999999 89999999999999999999999994
No 28
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.93 E-value=3.4e-26 Score=221.96 Aligned_cols=147 Identities=26% Similarity=0.384 Sum_probs=132.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..+...+.+.||+|.||+|..|....+..||||.++.+.....+.+|.+|+++|.+++|||||+++|+|..++.+++++|
T Consensus 536 PRs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~E 615 (807)
T KOG1094|consen 536 PRSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITE 615 (807)
T ss_pred chhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHH
Confidence 34455667999999999999999877899999999988777777899999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++|+|.+++..+... ...-....+|+.|||.||+||.+. ++||||+.++|+|+|.++++||+||-
T Consensus 616 YmEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~---nfVHrd~a~rNcLv~~e~~iKiadfg 682 (807)
T KOG1094|consen 616 YMENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESL---NFVHRDLATRNCLVDGEFTIKIADFG 682 (807)
T ss_pred HHhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhh---chhhccccccceeecCcccEEecCcc
Confidence 99999999999876432 234456678999999999999998 99999999999999999999999993
No 29
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.93 E-value=1.1e-25 Score=208.73 Aligned_cols=145 Identities=26% Similarity=0.390 Sum_probs=123.1
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCC-ccceeeEEecCC------c
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRN-LLRLYGFCTTVT------E 366 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~------~ 366 (447)
.|+..+.||+|+||+||+|+. .+|+.||+|.++...... ......+|+.+++.++|+| ||++++++.+.+ .
T Consensus 12 ~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~ 91 (323)
T KOG0594|consen 12 DYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGK 91 (323)
T ss_pred HHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccce
Confidence 344557799999999999994 568999999997654422 2335789999999999999 999999998877 7
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++|+||+.. +|..++.........++-..+..++.|+++||+|||++ +|+||||||+|||++++|..|++||-
T Consensus 92 l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~---~IlHRDLKPQNlLi~~~G~lKlaDFG 165 (323)
T KOG0594|consen 92 LYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSH---GILHRDLKPQNLLISSSGVLKLADFG 165 (323)
T ss_pred EEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCcceEEECCCCcEeeeccc
Confidence 8899999964 99999987643212366678999999999999999999 99999999999999999999999995
No 30
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.93 E-value=2.1e-25 Score=210.06 Aligned_cols=143 Identities=31% Similarity=0.504 Sum_probs=124.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--ceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~e 372 (447)
++...+.||+|+||.||.+... +|...|||.+....... ...+.+|+.+|.+++|||||+.+|...... ..++.||
T Consensus 18 ~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~-~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 18 NWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPT-SESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred hhhhhccccCccceEEEEEEecCCCcceeeeeeecccchh-HHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 3555688999999999999964 48999999986542222 446899999999999999999999855554 5899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeeccccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTILR 445 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~~ 445 (447)
|+++|+|.+++...+. .+++..+..+..||++||+|||++ +||||||||+|||++. ++.+||+||..
T Consensus 97 y~~~GsL~~~~~~~g~---~l~E~~v~~ytr~iL~GL~ylHs~---g~vH~DiK~~NiLl~~~~~~~KlaDFG~ 164 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGG---KLPEPLVRRYTRQILEGLAYLHSK---GIVHCDIKPANILLDPSNGDVKLADFGL 164 (313)
T ss_pred ccCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCcccceEEEeCCCCeEEeccCcc
Confidence 9999999999987653 389999999999999999999999 9999999999999999 79999999973
No 31
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.93 E-value=1.4e-25 Score=219.34 Aligned_cols=150 Identities=30% Similarity=0.433 Sum_probs=125.9
Q ss_pred HHhcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
+..++|++.+.||+|+||.||+|.. .+++.||||.++..........+.+|+.++..+ +||||++++++|...
T Consensus 4 ~~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~ 83 (338)
T cd05102 4 FPRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKP 83 (338)
T ss_pred cchhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCC
Confidence 3456788899999999999999974 235689999997543333345689999999999 899999999988764
Q ss_pred C-ceEEEeecCCCCChhhHhhccCCC------------------------------------------------------
Q 013258 365 T-EKLLVYPYMTNGSVASRLRERQSS------------------------------------------------------ 389 (447)
Q Consensus 365 ~-~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------ 389 (447)
+ ..+++|||+++|+|.+++......
T Consensus 84 ~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (338)
T cd05102 84 NGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQET 163 (338)
T ss_pred CCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhc
Confidence 4 578999999999999998753210
Q ss_pred ----CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 390 ----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 390 ----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...+++.....++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 164 ~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDiKp~Nil~~~~~~~kl~DfG 219 (338)
T cd05102 164 DDLWKSPLTMEDLICYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFG 219 (338)
T ss_pred cccccCCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCccceEEEcCCCcEEEeecc
Confidence 12477888999999999999999998 99999999999999999999999995
No 32
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.92 E-value=7.5e-26 Score=218.91 Aligned_cols=142 Identities=26% Similarity=0.411 Sum_probs=127.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|.+.+.||+|+||.||||+.+ +.+.||+|.+.+.. .....+.+.+|+++++.++|||||.++++|++..+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 45777789999999999999854 58899999985433 33334568999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+.| +|+++|..... +++..+..|+.++..||.|||+. +|+|||+||+|||++..+.+|++||-
T Consensus 82 ~a~g-~L~~il~~d~~----lpEe~v~~~a~~LVsaL~yLhs~---rilhrd~kPqniLl~~~~~~KlcdFg 145 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK----LPEEQVRAIAYDLVSALYYLHSN---RILHRDMKPQNILLEKGGTLKLCDFG 145 (808)
T ss_pred hhhh-hHHHHHHhccC----CCHHHHHHHHHHHHHHHHHHHhc---CcccccCCcceeeecCCCceeechhh
Confidence 9987 99999987543 89999999999999999999999 99999999999999999999999984
No 33
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.92 E-value=4.5e-25 Score=212.55 Aligned_cols=147 Identities=29% Similarity=0.456 Sum_probs=126.3
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-----------------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-----------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 357 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 357 (447)
++|...+.||+|+||.||+|.+.+ +..||+|.++.........+|.+|++++.+++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 467788999999999999997532 347999998765433344579999999999999999999
Q ss_pred eeEEecCCceEEEeecCCCCChhhHhhccCC---------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeee
Q 013258 358 YGFCTTVTEKLLVYPYMTNGSVASRLRERQS---------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 422 (447)
Q Consensus 358 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~---------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 422 (447)
++++...+..++||||+++|+|.+++..... ....++|.....++.|++.||+|||+. +|+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSL---NFVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHC---Cccc
Confidence 9999999999999999999999999865321 112468889999999999999999999 9999
Q ss_pred cCCCCCceeeCCCCceeecccc
Q 013258 423 RDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 423 rDlkp~NILl~~~~~~~i~df~ 444 (447)
|||||+|||+++++.+||+||-
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG 183 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFG 183 (304)
T ss_pred cCcchhheEEcCCccEEECCCc
Confidence 9999999999999999999995
No 34
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.92 E-value=5.9e-26 Score=221.78 Aligned_cols=149 Identities=30% Similarity=0.477 Sum_probs=130.2
Q ss_pred HHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 287 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
.++..+..+.+...+.||+|+||+||+|+|. ..||||.++.+.... ..+.|..|+..+++-+|.||+-++|||..+.
T Consensus 384 ~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~ 461 (678)
T KOG0193|consen 384 LEEWEIPPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPP 461 (678)
T ss_pred ccccccCHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence 3445555556667889999999999999984 369999997654333 3456999999999999999999999999887
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
. .+|+.+|+|-+|+.+++..+. .++..+...||.|||+|+.|||.+ +|||||||+.||++.+++.+||.||-
T Consensus 462 ~-AIiTqwCeGsSLY~hlHv~et---kfdm~~~idIAqQiaqGM~YLHAK---~IIHrDLKSnNIFl~~~~kVkIgDFG 533 (678)
T KOG0193|consen 462 L-AIITQWCEGSSLYTHLHVQET---KFDMNTTIDIAQQIAQGMDYLHAK---NIIHRDLKSNNIFLHEDLKVKIGDFG 533 (678)
T ss_pred e-eeeehhccCchhhhhccchhh---hhhHHHHHHHHHHHHHhhhhhhhh---hhhhhhccccceEEccCCcEEEeccc
Confidence 7 999999999999999997654 388899999999999999999999 99999999999999999999999994
No 35
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=9e-25 Score=206.42 Aligned_cols=140 Identities=31% Similarity=0.440 Sum_probs=119.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHh--cCCCCCccceeeEEecC----CceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIIS--MAVHRNLLRLYGFCTTV----TEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~--~l~H~niv~l~~~~~~~----~~~~ 368 (447)
......+.||+|.||+||+|+++ |+.||||++.. .++..+.+|.++.+ .++|+||..+++.-..+ .+++
T Consensus 211 rqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~s----rdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLw 285 (513)
T KOG2052|consen 211 RQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSS----RDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLW 285 (513)
T ss_pred heeEEEEEecCccccceeecccc-CCceEEEEecc----cchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEE
Confidence 34666799999999999999995 78999999953 23446777777775 56999999999876543 3579
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-----CCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-----HCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-----~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
||.||.++|||+++|... .++-...++++..+|.||+|||. +.+|.|.|||||+.|||+..++...|+|+
T Consensus 286 LvTdYHe~GSL~DyL~r~-----tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL 360 (513)
T KOG2052|consen 286 LVTDYHEHGSLYDYLNRN-----TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL 360 (513)
T ss_pred EeeecccCCcHHHHHhhc-----cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence 999999999999999874 38889999999999999999995 46899999999999999999999999998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 361 G 361 (513)
T KOG2052|consen 361 G 361 (513)
T ss_pred e
Confidence 5
No 36
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.92 E-value=4.8e-25 Score=217.75 Aligned_cols=143 Identities=20% Similarity=0.314 Sum_probs=126.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+|+.. +++.||+|+++.... ......+.+|+.++..++|+||+++++.+.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 46888899999999999999854 589999999864321 122345788999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---givHrDlKp~NILi~~~~~vkL~DFG 146 (363)
T cd05628 81 EFLPGGDMMTLLMKKD----TLTEEETQFYIAETVLAIDSIHQL---GFIHRDIKPDNLLLDSKGHVKLSDFG 146 (363)
T ss_pred cCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCCEEEeecc
Confidence 9999999999997643 388999999999999999999999 99999999999999999999999995
No 37
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.92 E-value=8e-25 Score=206.65 Aligned_cols=144 Identities=26% Similarity=0.377 Sum_probs=127.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|++.+.||+|+||.||+|.+. .+..||+|.++..........+.+|+..+.+++||||+++++++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 46788899999999999999753 35689999997654433445789999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... ..++|..+..++.|++.||+|||+. +++||||||+|||+++++.++++||.
T Consensus 85 ~e~~~~~~L~~~l~~~~---~~l~~~~~~~~~~~i~~al~~lH~~---~iiH~dikp~nili~~~~~~~l~dfg 152 (266)
T cd05064 85 TEYMSNGALDSFLRKHE---GQLVAGQLMGMLPGLASGMKYLSEM---GYVHKGLAAHKVLVNSDLVCKISGFR 152 (266)
T ss_pred EEeCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEeeccccHhhEEEcCCCcEEECCCc
Confidence 99999999999997643 2488999999999999999999998 99999999999999999999999985
No 38
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.92 E-value=3e-25 Score=208.09 Aligned_cols=143 Identities=29% Similarity=0.311 Sum_probs=126.4
Q ss_pred CCCCCCccccCCCceEEEEEeCC-CcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.|+..+.||+|.-|+||.+++++ +..+|+|++.+.... ....+.+.|.++|+.++||.++.||+.+++++..+++||
T Consensus 78 ~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~me 157 (459)
T KOG0610|consen 78 HFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVME 157 (459)
T ss_pred HHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEe
Confidence 34556889999999999999765 689999999655422 223367889999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
||+||+|....+.+.. ..+++..+..++..|+.||+|||.. |||+|||||+||||-+||.+-++||
T Consensus 158 yCpGGdL~~LrqkQp~--~~fse~~aRFYaAEvl~ALEYLHml---GivYRDLKPENILvredGHIMLsDF 223 (459)
T KOG0610|consen 158 YCPGGDLHSLRQKQPG--KRFSESAARFYAAEVLLALEYLHML---GIVYRDLKPENILVREDGHIMLSDF 223 (459)
T ss_pred cCCCccHHHHHhhCCC--CccchhhHHHHHHHHHHHHHHHHhh---ceeeccCCcceeEEecCCcEEeeec
Confidence 9999999999887644 3589999999999999999999999 9999999999999999999999998
No 39
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=99.92 E-value=6.2e-25 Score=218.12 Aligned_cols=143 Identities=19% Similarity=0.302 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|...+.||+|+||+||+++.. +++.||||.+..... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 36888899999999999999854 689999999854321 222346888999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||.
T Consensus 81 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---givHrDlkp~NIll~~~~~~kl~DfG 146 (377)
T cd05629 81 EFLPGGDLMTMLIKYD----TFSEDVTRFYMAECVLAIEAVHKL---GFIHRDIKPDNILIDRGGHIKLSDFG 146 (377)
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEEeecc
Confidence 9999999999987643 378888999999999999999999 99999999999999999999999995
No 40
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.92 E-value=5.4e-25 Score=217.48 Aligned_cols=143 Identities=22% Similarity=0.352 Sum_probs=127.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 46888899999999999999964 589999999965321 122335788999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||.
T Consensus 81 E~~~~g~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 146 (364)
T cd05599 81 EYLPGGDMMTLLMKKD----TFTEEETRFYIAETILAIDSIHKL---GYIHRDIKPDNLLLDAKGHIKLSDFG 146 (364)
T ss_pred CCCCCcHHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEeecc
Confidence 9999999999987643 388999999999999999999999 99999999999999999999999995
No 41
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.92 E-value=7.3e-26 Score=209.80 Aligned_cols=141 Identities=28% Similarity=0.435 Sum_probs=116.4
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----ceEEE
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKLLV 370 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lv 370 (447)
|...+++|+|+||.||+|.+. +++.||||+...+.. ---+|.++|+.++|||||+|.-+|.... ...+|
T Consensus 26 ~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r-----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 26 YEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR-----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC-----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 455689999999999999965 479999998854432 2247899999999999999998886532 23589
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTILRR 446 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~~~ 446 (447)
||||+. +|.+.++........++.-.+.-+..|+.+||.|||+. +|+||||||+|+|+|.+ |..||+||...
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~---~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSH---GICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhc---CcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 999986 99999986433333477778889999999999999998 99999999999999987 89999999764
No 42
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.92 E-value=8.6e-25 Score=217.37 Aligned_cols=142 Identities=23% Similarity=0.276 Sum_probs=125.7
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.|...+.||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 4777899999999999999854 588999999965322 1223468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||.
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDlKp~Nili~~~~~~kL~DFG 146 (381)
T cd05626 82 YIPGGDMMSLLIRME----VFPEVLARFYIAELTLAIESVHKM---GFIHRDIKPDNILIDLDGHIKLTDFG 146 (381)
T ss_pred cCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCcHHHEEECCCCCEEEeeCc
Confidence 999999999987643 378888999999999999999998 99999999999999999999999995
No 43
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.92 E-value=6.5e-25 Score=210.16 Aligned_cols=143 Identities=24% Similarity=0.302 Sum_probs=126.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46888899999999999999965 589999999864321 122345889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++.....++.|++.||+|||++ +|+||||||+|||+++++.+|++||-
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~NIli~~~~~~kl~Dfg 146 (291)
T cd05612 81 EYVPGGELFSYLRNSG----RFSNSTGLFYASEIVCALEYLHSK---EIVYRDLKPENILLDKEGHIKLTDFG 146 (291)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEEecC
Confidence 9999999999997653 378899999999999999999999 99999999999999999999999985
No 44
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.92 E-value=8.8e-25 Score=212.98 Aligned_cols=143 Identities=22% Similarity=0.310 Sum_probs=126.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|...+.||+|+||.||+|+.. +++.||+|.++.... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 46788899999999999999965 589999999864321 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 98 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kl~Dfg 163 (329)
T PTZ00263 98 EFVVGGELFTHLRKAG----RFPNDVAKFYHAELVLAFEYLHSK---DIIYRDLKPENLLLDNKGHVKVTDFG 163 (329)
T ss_pred cCCCCChHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEECCCCCEEEeecc
Confidence 9999999999997653 378888999999999999999999 99999999999999999999999985
No 45
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.92 E-value=8.4e-25 Score=216.84 Aligned_cols=148 Identities=29% Similarity=0.383 Sum_probs=127.0
Q ss_pred hcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 366 (447)
.++|+..+.||+|+||.||+|+. .++..||||+++..........+.+|++++..+ +||||++++++|...+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 45678889999999999999963 235689999997544333445688999999999 89999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCC----------------------------------------------------------
Q 013258 367 KLLVYPYMTNGSVASRLRERQS---------------------------------------------------------- 388 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~---------------------------------------------------------- 388 (447)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999875321
Q ss_pred -------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 389 -------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 389 -------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
....++|..+..++.|+++||+|||+. +|+||||||+|||+++++.+|++||-
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~DfG 259 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASK---NCIHRDLAARNILLTHGRITKICDFG 259 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCchhhEEEECCCcEEEecCc
Confidence 012478889999999999999999998 99999999999999999999999985
No 46
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.92 E-value=1.8e-24 Score=206.79 Aligned_cols=143 Identities=27% Similarity=0.436 Sum_probs=125.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||+|+.. +++.||+|.++..........+.+|+++++.++||||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 46888899999999999999865 68999999986544333344678999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. |+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+|++||.
T Consensus 85 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~DfG 148 (288)
T cd07871 85 LD-SDLKQYLDNCGN---LMSMHNVKIFMFQLLRGLSYCHKR---KILHRDLKPQNLLINEKGELKLADFG 148 (288)
T ss_pred CC-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEECcCc
Confidence 97 499988865432 368889999999999999999999 99999999999999999999999995
No 47
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.91 E-value=1e-24 Score=215.76 Aligned_cols=147 Identities=24% Similarity=0.311 Sum_probs=128.6
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
+....++|+..+.||+|+||.||+++.. +++.+|+|.++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3445578999999999999999999965 588999999864321 1223457899999999999999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~~-----~~~~~~~~~~~~qil~aL~~LH~~---~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSNY-----DVPEKWAKFYTAEVVLALDAIHSM---GLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEEecc
Confidence 99999999999999998653 278888999999999999999999 99999999999999999999999995
No 48
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.91 E-value=2e-24 Score=209.90 Aligned_cols=137 Identities=26% Similarity=0.320 Sum_probs=121.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.||+|+||.||+++.. +|+.||+|+++.... ......+.+|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 689999999865422 122345788999999999999999999999999999999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||.
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DfG 140 (323)
T cd05571 81 ELFFHLSRER----VFSEDRARFYGAEIVSALGYLHSC---DVVYRDLKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEeeCC
Confidence 9999987643 388999999999999999999999 99999999999999999999999995
No 49
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=6.6e-25 Score=216.30 Aligned_cols=142 Identities=26% Similarity=0.376 Sum_probs=128.0
Q ss_pred CCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
-|+..+.||+|+.|.|..|+ ..+|+.+|||++..... ......+++|+.+|+.+.||||+++++++.+..++|+|.|
T Consensus 13 pwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlE 92 (786)
T KOG0588|consen 13 PWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLE 92 (786)
T ss_pred ceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEE
Confidence 35667889999999999998 45799999999965522 2223368999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|.|++++..++. +.+.++.+++.||+.|+.|+|.. +|+|||+||+|+|||...++||+||.
T Consensus 93 yv~gGELFdylv~kG~----l~e~eaa~ff~QIi~gv~yCH~~---~icHRDLKpENlLLd~~~nIKIADFG 157 (786)
T KOG0588|consen 93 YVPGGELFDYLVRKGP----LPEREAAHFFRQILDGVSYCHAF---NICHRDLKPENLLLDVKNNIKIADFG 157 (786)
T ss_pred ecCCchhHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHhhh---cceeccCCchhhhhhcccCEeeeccc
Confidence 9999999999987654 89999999999999999999999 99999999999999999999999995
No 50
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.91 E-value=1.8e-24 Score=214.72 Aligned_cols=142 Identities=23% Similarity=0.295 Sum_probs=125.8
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+|++.+.||+|+||.||+++.. +++.||||.+..... ......+.+|++++..++||||+++++.+...+..++|||
T Consensus 2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E 81 (376)
T cd05598 2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (376)
T ss_pred CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEe
Confidence 6888899999999999999854 589999999864321 1223458899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||.
T Consensus 82 ~~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nill~~~~~ikL~DFG 146 (376)
T cd05598 82 YIPGGDMMSLLIRLG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (376)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHEEECCCCCEEEEeCC
Confidence 999999999997643 378888899999999999999999 99999999999999999999999995
No 51
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.91 E-value=1.5e-24 Score=215.79 Aligned_cols=142 Identities=24% Similarity=0.297 Sum_probs=125.3
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.|...+.||+|+||+||+|+.. +++.||+|.+..... ......+.+|+.+++.++||||+++++.+.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 4778899999999999999854 588999999864321 1223468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||.
T Consensus 82 ~~~gg~L~~~l~~~~----~~~e~~~~~~~~qi~~al~~lH~~---~ivHrDlKp~NILl~~~g~~kL~DFG 146 (382)
T cd05625 82 YIPGGDMMSLLIRMG----IFPEDLARFYIAELTCAVESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 146 (382)
T ss_pred CCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEEeECC
Confidence 999999999987643 378888899999999999999999 99999999999999999999999995
No 52
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.91 E-value=2.7e-24 Score=209.01 Aligned_cols=137 Identities=25% Similarity=0.326 Sum_probs=121.1
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.||+|+||.||+++.. +|+.||+|.++.... ......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999854 689999999865422 222345788999999999999999999999999999999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Dfg 140 (323)
T cd05595 81 ELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 140 (323)
T ss_pred cHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEEcCCCCEEecccH
Confidence 9998887543 388999999999999999999999 99999999999999999999999995
No 53
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.91 E-value=1.9e-24 Score=211.36 Aligned_cols=144 Identities=24% Similarity=0.291 Sum_probs=126.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC--CcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|+..+.||+|+||.||+|+... +..||+|.+..... ......+.+|+.++..++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568888999999999999998543 36899999854321 2223468899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+|++||-
T Consensus 109 v~Ey~~~g~L~~~i~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNK----RFPNDVGCFYAAQIVLIFEYLQSL---NIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred EEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEecCC
Confidence 999999999999997653 388899999999999999999999 99999999999999999999999995
No 54
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.91 E-value=3.8e-24 Score=206.03 Aligned_cols=144 Identities=26% Similarity=0.448 Sum_probs=126.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 367888999999999999999965 6899999998654333334467899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+. ++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 84 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 148 (303)
T cd07869 84 YVH-TDLCQYMDKHPG---GLHPENVKLFLFQLLRGLSYIHQR---YILHRDLKPQNLLISDTGELKLADFG 148 (303)
T ss_pred CCC-cCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECCCC
Confidence 995 688888765432 378889999999999999999999 99999999999999999999999995
No 55
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=99.91 E-value=2.3e-24 Score=210.37 Aligned_cols=143 Identities=23% Similarity=0.304 Sum_probs=127.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||||+++.... ......+.+|++++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36788899999999999999965 589999999965432 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+||.
T Consensus 81 e~~~g~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kL~Dfg 146 (333)
T cd05600 81 EYVPGGDFRTLLNNLG----VLSEDHARFYMAEMFEAVDALHEL---GYIHRDLKPENFLIDASGHIKLTDFG 146 (333)
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEEEeCc
Confidence 9999999999997543 378899999999999999999999 99999999999999999999999995
No 56
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.91 E-value=3.9e-24 Score=208.29 Aligned_cols=137 Identities=28% Similarity=0.338 Sum_probs=121.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.||+|+||.||+++.. +++.||+|+++.... ......+.+|+++++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46899999999999854 589999999965432 222346889999999999999999999999999999999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~NIll~~~~~~kL~DfG 140 (328)
T cd05593 81 ELFFHLSRER----VFSEDRTRFYGAEIVSALDYLHSG---KIVYRDLKLENLMLDKDGHIKITDFG 140 (328)
T ss_pred CHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeEECCCCcEEEecCc
Confidence 9998886543 388999999999999999999999 99999999999999999999999995
No 57
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.91 E-value=3.5e-24 Score=204.48 Aligned_cols=143 Identities=29% Similarity=0.392 Sum_probs=124.6
Q ss_pred CCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||+|+||+||+|.. .+++.||+|.+..... ......+.+|+.++..++|+||+++++++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 66778999999999999985 4689999999864321 12234578999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+.+..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+||-
T Consensus 82 ~~~g~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nill~~~~~~kl~Dfg 147 (285)
T cd05631 82 MNGGDLKFHIYNMGN--PGFDEQRAIFYAAELCCGLEDLQRE---RIVYRDLKPENILLDDRGHIRISDLG 147 (285)
T ss_pred cCCCcHHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeeCC
Confidence 999999988865322 2488999999999999999999999 99999999999999999999999984
No 58
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.91 E-value=2.8e-24 Score=212.99 Aligned_cols=149 Identities=30% Similarity=0.412 Sum_probs=126.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 365 (447)
..++|++.+.||+|+||.||+|+.. ++..||||.++..........+.+|+++++.+ +|+|||+++++|...+
T Consensus 36 ~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~ 115 (374)
T cd05106 36 PRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGG 115 (374)
T ss_pred cHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCC
Confidence 3457888999999999999998742 24579999997544333345688999999999 8999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCC---------------------------------------------------------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQS--------------------------------------------------------- 388 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 388 (447)
..++||||+++|+|.++++....
T Consensus 116 ~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (374)
T cd05106 116 PVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSS 195 (374)
T ss_pred CeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccc
Confidence 99999999999999999864311
Q ss_pred ---------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 389 ---------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 389 ---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
....+++.....++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 196 ~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~---giiHrDLkp~Nil~~~~~~~kL~DfG 257 (374)
T cd05106 196 DSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASK---NCIHRDVAARNVLLTDGRVAKICDFG 257 (374)
T ss_pred cccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CEEeccCchheEEEeCCCeEEEeece
Confidence 012478888999999999999999998 99999999999999999999999984
No 59
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.91 E-value=8.1e-24 Score=205.83 Aligned_cols=137 Identities=26% Similarity=0.325 Sum_probs=120.4
Q ss_pred CccccCCCceEEEEEe-CCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.||+|+||.||+++. .+++.||+|.++.... ......+.+|++++..++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 4699999999999985 4689999999965432 122345788999999999999999999999999999999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|..++.... .+++..+..++.|++.||+|||+ . +|+||||||+|||+++++.+||+||.
T Consensus 81 ~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~lH~~~---~ivHrDikp~NIll~~~~~~kL~Dfg 141 (325)
T cd05594 81 ELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFG 141 (325)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CEEecCCCCCeEEECCCCCEEEecCC
Confidence 9998886543 38899999999999999999997 6 89999999999999999999999995
No 60
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.91 E-value=1.9e-24 Score=213.97 Aligned_cols=145 Identities=22% Similarity=0.273 Sum_probs=126.6
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
...++|+..+.||+|+||.||+++.. +++.||+|.++.... ......+.+|+.+++.++||||+++++++...+..+
T Consensus 40 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~ 119 (370)
T cd05596 40 MKAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLY 119 (370)
T ss_pred CCHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEE
Confidence 34567888999999999999999864 588999999864321 122335788999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 120 lv~Ey~~gg~L~~~l~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~kL~DfG 187 (370)
T cd05596 120 MVMEYMPGGDLVNLMSNY-----DIPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADFG 187 (370)
T ss_pred EEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEcCCCCEEEEecc
Confidence 999999999999998653 267788889999999999999999 99999999999999999999999994
No 61
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.91 E-value=5.5e-24 Score=205.81 Aligned_cols=135 Identities=21% Similarity=0.295 Sum_probs=119.9
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||.||+|+.. +++.||+|.++... .......+.+|+.++..++||||+++++++...+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999965 58899999986432 122234678999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++|+||.
T Consensus 81 ~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~HrDlkp~Nili~~~~~~kl~Dfg 138 (312)
T cd05585 81 FHHLQREG----RFDLSRARFYTAELLCALENLHKF---NVIYRDLKPENILLDYQGHIALCDFG 138 (312)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHeEECCCCcEEEEECc
Confidence 99997643 388999999999999999999999 99999999999999999999999995
No 62
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.91 E-value=7.7e-24 Score=206.51 Aligned_cols=145 Identities=26% Similarity=0.345 Sum_probs=128.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||.||+++.. ++..||+|.++.........++.+|++++..++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 467888999999999999999965 5889999998654333334569999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|++.||.|||+.+ +|+||||||+|||+++++.++|+||-
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg 149 (331)
T cd06649 84 HMDGGSLDQVLKEAK----RIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFG 149 (331)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCc
Confidence 999999999997643 3788999999999999999999852 59999999999999999999999995
No 63
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.91 E-value=4.7e-24 Score=210.51 Aligned_cols=143 Identities=20% Similarity=0.335 Sum_probs=126.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+++.. +++.||+|+++... .......+.+|+.++..++||||+++++.+...+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46788899999999999999865 58999999986432 1222346788999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+||-
T Consensus 81 E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~~L~~lH~~---givHrDLkp~NIli~~~~~vkL~DfG 146 (360)
T cd05627 81 EFLPGGDMMTLLMKKD----TLSEEATQFYIAETVLAIDAIHQL---GFIHRDIKPDNLLLDAKGHVKLSDFG 146 (360)
T ss_pred eCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEccCCCHHHEEECCCCCEEEeecc
Confidence 9999999999997643 378899999999999999999999 99999999999999999999999995
No 64
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.91 E-value=6.8e-24 Score=205.52 Aligned_cols=143 Identities=27% Similarity=0.469 Sum_probs=123.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.+|+..+.||+|+||.||+|++. ++. .||+|.++.........++.+|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46888899999999999999853 333 48999987544334455789999999999999999999998764 5789
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++|+|.+++..... .+++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 86 v~e~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~iiH~dlkp~Nill~~~~~~kl~DfG 154 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEER---RLVHRDLAARNVLVKTPQHVKITDFG 154 (316)
T ss_pred eeecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHhc---CeeccccchhheEecCCCcEEEcccc
Confidence 9999999999999986532 378899999999999999999999 99999999999999999999999985
No 65
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.91 E-value=7.1e-24 Score=206.94 Aligned_cols=145 Identities=26% Similarity=0.349 Sum_probs=127.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||.||+++.. ++..+|+|.++..........+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 467899999999999999999965 5889999988654333334568999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++.....++.|++.||.|||+.. +|+||||||+|||+++++.+|++||-
T Consensus 84 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg 149 (333)
T cd06650 84 HMDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFG 149 (333)
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCC
Confidence 999999999997643 3788889999999999999999742 69999999999999999999999994
No 66
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.91 E-value=5.7e-24 Score=207.44 Aligned_cols=144 Identities=22% Similarity=0.299 Sum_probs=126.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||+||+++.. +++.||+|.++... .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 46888899999999999999964 58999999986422 1222345889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||.
T Consensus 81 e~~~g~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 147 (331)
T cd05597 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVLAIDSVHQL---GYVHRDIKPDNVLLDKNGHIRLADFG 147 (331)
T ss_pred ecCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEECCCCHHHEEECCCCCEEEEECC
Confidence 99999999999976322 378889999999999999999999 99999999999999999999999995
No 67
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.91 E-value=4.3e-24 Score=211.42 Aligned_cols=150 Identities=23% Similarity=0.313 Sum_probs=130.4
Q ss_pred HHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013258 287 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTT 363 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 363 (447)
+.+.....++|+..+.||+|+||.||+++.. +++.+|+|.++.... ......+.+|+.+++.++||||+++++++..
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4445566688999999999999999999965 588999999854221 1223357889999999999999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
.+..++||||+++|+|.+++... .++...+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHEEECCCCCEEEEeC
Confidence 99999999999999999998653 267888899999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 187 G 187 (371)
T cd05622 187 G 187 (371)
T ss_pred C
Confidence 5
No 68
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.91 E-value=5.9e-24 Score=207.21 Aligned_cols=144 Identities=23% Similarity=0.294 Sum_probs=127.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+++.. +++.||+|.++.... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 36888899999999999999864 689999999975432 223346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 81 e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~lH~~---~i~H~Dlkp~NIll~~~~~~kL~Dfg 147 (330)
T cd05601 81 EYQPGGDLLSLLNRYED---QFDEDMAQFYLAELVLAIHSVHQM---GYVHRDIKPENVLIDRTGHIKLADFG 147 (330)
T ss_pred CCCCCCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEcccCchHheEECCCCCEEeccCC
Confidence 99999999999976522 388999999999999999999999 99999999999999999999999995
No 69
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.91 E-value=6.6e-24 Score=211.56 Aligned_cols=149 Identities=28% Similarity=0.381 Sum_probs=127.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 365 (447)
..++|.+.+.||+|+||.||+|+.. .+..||||+++..........+.+|+++++.+. ||||+++++++...+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 4567888899999999999999852 134799999975543333457999999999996 999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCC---------------------------------------------------------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQS--------------------------------------------------------- 388 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 388 (447)
..++||||+++|+|.++++....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999998875321
Q ss_pred -----------------------------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC
Q 013258 389 -----------------------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 433 (447)
Q Consensus 389 -----------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~ 433 (447)
....+++..+..++.|+++||+|||+. +|+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASK---NCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHhEEEe
Confidence 012477888899999999999999998 999999999999999
Q ss_pred CCCceeecccc
Q 013258 434 EDADQSSKTIL 444 (447)
Q Consensus 434 ~~~~~~i~df~ 444 (447)
+++.+|++||-
T Consensus 272 ~~~~~kL~DfG 282 (400)
T cd05105 272 QGKIVKICDFG 282 (400)
T ss_pred CCCEEEEEeCC
Confidence 99999999984
No 70
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.91 E-value=6.7e-24 Score=206.93 Aligned_cols=144 Identities=20% Similarity=0.264 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||+||+++.. +++.||+|.+.... .......+.+|+.++..++|+||+++++++...+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888899999999999999965 58899999986432 1122335788999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 81 Ey~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~~L~~lH~~---~iiHrDlkp~Nill~~~~~~kl~DfG 147 (331)
T cd05624 81 DYYVGGDLLTLLSKFED---RLPEDMARFYIAEMVLAIHSIHQL---HYVHRDIKPDNVLLDMNGHIRLADFG 147 (331)
T ss_pred eCCCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCchHHEEEcCCCCEEEEecc
Confidence 99999999999976422 378889999999999999999999 99999999999999999999999995
No 71
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.90 E-value=3.3e-24 Score=225.40 Aligned_cols=148 Identities=32% Similarity=0.497 Sum_probs=130.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC--Cc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD--GK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~--~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.+..+..+.||+|+||+||+|...+ +. .||||.++...+.....+|.+|..+|+.++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 3445567889999999999998653 33 49999998776666677899999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCC---CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|||++|+|..+|++.+. ....+...+.+.++.|||+|+.||+++ ++|||||.++|+||++...+||+||-
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~---~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESK---HFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhC---CCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999998621 234578889999999999999999999 99999999999999999999999994
No 72
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.90 E-value=1.9e-23 Score=197.15 Aligned_cols=144 Identities=31% Similarity=0.453 Sum_probs=127.8
Q ss_pred cCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|+..+.||+|+||.||+|++.. ...||||.++.........+|.+|+.++..++||||+++++++...+..+++
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 568888999999999999998642 4579999987654444455789999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||-
T Consensus 84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~di~p~nili~~~~~~~l~dfg 151 (266)
T cd05033 84 TEYMENGSLDKFLRENDG---KFTVGQLVGMLRGIASGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFG 151 (266)
T ss_pred EEcCCCCCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCCEEECccc
Confidence 999999999999976432 488999999999999999999998 99999999999999999999999985
No 73
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.90 E-value=5.3e-24 Score=209.18 Aligned_cols=143 Identities=26% Similarity=0.357 Sum_probs=127.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+.. +++.||||+++.... ......+.+|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 36888899999999999999965 689999999865432 123446889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|++||.
T Consensus 81 e~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---giiH~Dlkp~NIll~~~~~~kL~Dfg 146 (350)
T cd05573 81 EYMPGGDLMNLLIRKD----VFPEETARFYIAELVLALDSVHKL---GFIHRDIKPDNILIDADGHIKLADFG 146 (350)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEeecCC
Confidence 9999999999997652 388899999999999999999998 99999999999999999999999985
No 74
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.90 E-value=5.9e-24 Score=209.21 Aligned_cols=138 Identities=24% Similarity=0.342 Sum_probs=119.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|+||.||+|+.. +++.||||.+...........+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 75 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 154 (353)
T PLN00034 75 ELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFM 154 (353)
T ss_pred HHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecC
Confidence 3455688999999999999864 689999999865433333456899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.... ..++.....++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 155 ~~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DfG 213 (353)
T PLN00034 155 DGGSLEGTH--------IADEQFLADVARQILSGIAYLHRR---HIVHRDIKPSNLLINSAKNVKIADFG 213 (353)
T ss_pred CCCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEcccc
Confidence 999986432 245677889999999999999999 99999999999999999999999995
No 75
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.5e-24 Score=211.76 Aligned_cols=146 Identities=28% Similarity=0.421 Sum_probs=126.6
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCc
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 366 (447)
....++|...++||+|+||+|+.+..+ +++.+|||.++++.. .+.....+.|.+++... +||.+++++..+++.++
T Consensus 364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~ 443 (694)
T KOG0694|consen 364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEH 443 (694)
T ss_pred cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCe
Confidence 345578999999999999999999965 588999999987642 23334577888888766 59999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.|+||||+.||++..+.+.. .++++.+..+++.|+.||+|||++ +|||||||.+|||||.+|.+||+||-
T Consensus 444 l~fvmey~~Ggdm~~~~~~~-----~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiADFG 513 (694)
T KOG0694|consen 444 LFFVMEYVAGGDLMHHIHTD-----VFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIADFG 513 (694)
T ss_pred EEEEEEecCCCcEEEEEecc-----cccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEecccc
Confidence 99999999999965554432 389999999999999999999999 99999999999999999999999995
No 76
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.90 E-value=1.8e-23 Score=196.10 Aligned_cols=142 Identities=29% Similarity=0.429 Sum_probs=126.8
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|+..+.||+|+||.||++++.++..+|+|.++... ....++.+|++++++++||||+++++++...+..++||||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~ 81 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA--MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFM 81 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC--ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcC
Confidence 3577788999999999999998888899999886432 23457899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.++++.... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~d~g 145 (256)
T cd05114 82 ENGCLLNYLRQRQG---KLSKDMLLSMCQDVCEGMEYLERN---SFIHRDLAARNCLVSSTGVVKVSDFG 145 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcceEEEcCCCeEEECCCC
Confidence 99999999876432 378999999999999999999998 99999999999999999999999985
No 77
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.90 E-value=1.3e-23 Score=200.04 Aligned_cols=139 Identities=29% Similarity=0.400 Sum_probs=120.6
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||+||++... +++.||+|.+...... .....+..|+++++.++|+||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999864 6889999998643222 1224578899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...+.........+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||-
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 142 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQR---RIIYRDLKPENVLLDNDGNVRISDLG 142 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCc
Confidence 988865433334589999999999999999999999 99999999999999999999999994
No 78
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.90 E-value=1.3e-23 Score=203.72 Aligned_cols=137 Identities=28% Similarity=0.359 Sum_probs=120.8
Q ss_pred CccccCCCceEEEEEe----CCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 301 NILGRGGFGKVYKGRL----ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
+.||+|+||.||+++. .+|+.||+|+++..... .....+.+|++++.+++||||+++++++...+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 35789999999654322 223457889999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 82 ~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 143 (318)
T cd05582 82 GGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 143 (318)
T ss_pred CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHeEECCCCcEEEeecc
Confidence 999999986543 388999999999999999999999 99999999999999999999999995
No 79
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.90 E-value=4.6e-24 Score=207.72 Aligned_cols=141 Identities=25% Similarity=0.385 Sum_probs=126.0
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
..|...+.||+|+.|.||.++ ..+++.||||++.... ...+.-+.+|+.+|+..+|+|||.+++.|...+++|.||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~-Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEy 351 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRK-QPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEY 351 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEecc-CCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEee
Confidence 346777899999999999998 5568999999995443 23334588999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++|+|.+.+.... +++.+...|+.++++||+|||.+ +|+|||||++|||++.++++||.||.
T Consensus 352 m~ggsLTDvVt~~~-----~~E~qIA~Icre~l~aL~fLH~~---gIiHrDIKSDnILL~~~g~vKltDFG 414 (550)
T KOG0578|consen 352 MEGGSLTDVVTKTR-----MTEGQIAAICREILQGLKFLHAR---GIIHRDIKSDNILLTMDGSVKLTDFG 414 (550)
T ss_pred cCCCchhhhhhccc-----ccHHHHHHHHHHHHHHHHHHHhc---ceeeeccccceeEeccCCcEEEeeee
Confidence 99999999987653 89999999999999999999999 99999999999999999999999994
No 80
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.90 E-value=1.4e-23 Score=203.88 Aligned_cols=137 Identities=27% Similarity=0.352 Sum_probs=119.9
Q ss_pred CccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 301 NILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.||+|+||.||+++. .+++.||||.++.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 2578999999864321 12233578899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++.... .+.+..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 82 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 145 (323)
T cd05584 82 LSGGELFMHLEREG----IFMEDTACFYLSEISLALEHLHQQ---GIIYRDLKPENILLDAQGHVKLTDFG 145 (323)
T ss_pred CCCchHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEeeCc
Confidence 99999999987643 377888889999999999999999 99999999999999999999999995
No 81
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=99.90 E-value=2.6e-23 Score=194.53 Aligned_cols=138 Identities=31% Similarity=0.486 Sum_probs=122.6
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
+.||+|+||.||+|+.. +++.||+|.+...........+.+|+++++.++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 46999999999999864 68999999886543333345799999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++++... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+|++||.
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 139 (252)
T cd05084 81 LTFLRTEG---PRLKVKELIQMVENAAAGMEYLESK---HCIHRDLAARNCLVTEKNVLKISDFG 139 (252)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEEcCCCcEEECccc
Confidence 99987543 2478999999999999999999999 99999999999999999999999994
No 82
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.90 E-value=1.5e-23 Score=203.96 Aligned_cols=142 Identities=25% Similarity=0.337 Sum_probs=122.8
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCC-CccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHR-NLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 371 (447)
+|+..+.||+|+||.||+|+.. +++.||||+++.... ......+..|++++..++|+ +|+++++++...+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4777899999999999999865 578999999865421 22334678899999999765 5888999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||.
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05587 81 EYVNGGDLMYHIQQVG----KFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDAEGHIKIADFG 146 (324)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEEcCCCCEEEeecC
Confidence 9999999999987643 378999999999999999999999 99999999999999999999999995
No 83
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.90 E-value=2.1e-23 Score=201.38 Aligned_cols=143 Identities=25% Similarity=0.426 Sum_probs=125.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||+|+.+ +++.||+|.++..........+.+|+++++.++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 46788899999999999999865 58899999987554444444688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++ +|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||.
T Consensus 86 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 149 (309)
T cd07872 86 LDK-DLKQYMDDCGN---IMSMHNVKIFLYQILRGLAYCHRR---KVLHRDLKPQNLLINERGELKLADFG 149 (309)
T ss_pred CCC-CHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 975 88888765432 378889999999999999999998 99999999999999999999999995
No 84
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.90 E-value=2.1e-23 Score=202.55 Aligned_cols=137 Identities=28% Similarity=0.404 Sum_probs=119.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||+|+++.... ......+..|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999865 588999999865432 22233577888888765 799999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|...+.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDikp~Nill~~~~~~kL~Dfg 141 (321)
T cd05591 81 GDLMFQIQRSR----KFDEPRSRFYAAEVTLALMFLHRH---GVIYRDLKLDNILLDAEGHCKLADFG 141 (321)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeecc
Confidence 99999887643 388999999999999999999999 99999999999999999999999995
No 85
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.90 E-value=2.3e-23 Score=202.97 Aligned_cols=137 Identities=25% Similarity=0.342 Sum_probs=120.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
++||+|+||.||+++.. +++.||+|+++..... .....+.+|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46899999999999864 5889999999754322 2233578899999888 799999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 g~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg 141 (329)
T cd05588 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYG 141 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEECcCc
Confidence 99998886543 389999999999999999999999 99999999999999999999999994
No 86
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.90 E-value=1.7e-23 Score=204.27 Aligned_cols=144 Identities=21% Similarity=0.276 Sum_probs=125.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+++.+ +++.+|+|.+.... .......+.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 36888899999999999999965 47889999985432 1122334888999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 81 ey~~~g~L~~~l~~~~~---~l~~~~~~~~~~qi~~al~~lH~~---~iiHrDlkp~Nili~~~~~~kL~DfG 147 (332)
T cd05623 81 DYYVGGDLLTLLSKFED---RLPEDMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFG 147 (332)
T ss_pred eccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHEEECCCCCEEEeecc
Confidence 99999999999976422 378899999999999999999998 99999999999999999999999995
No 87
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.90 E-value=1.9e-23 Score=203.91 Aligned_cols=142 Identities=25% Similarity=0.308 Sum_probs=123.4
Q ss_pred CCCCCCccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 296 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
+|++.+.||+|+||.||+++. .+++.||+|+++.... ......+.+|+.++..+ +||||+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 477789999999999999875 2578999999864321 11233578899999999 599999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nili~~~~~~kl~DfG 150 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRD----NFSEDEVRFYSGEIILALEHLHKL---GIVYRDIKLENILLDSEGHVVLTDFG 150 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHeEECCCCCEEEeeCc
Confidence 99999999999999987643 388899999999999999999999 99999999999999999999999995
No 88
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.90 E-value=3e-23 Score=196.08 Aligned_cols=140 Identities=28% Similarity=0.353 Sum_probs=119.3
Q ss_pred ccccCCCceEEEEEeCC---CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 302 ILGRGGFGKVYKGRLAD---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
.||+|+||+||+|+..+ ...+|+|.+...........+.+|++.++.++||||+++++++...+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999997533 457888887654333334568899999999999999999999999999999999999999
Q ss_pred hhhHhhccCCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 379 VASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.+++...... ....++.....++.|++.||+|||+. +|+||||||+|||+++++.+|++||-
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 145 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQA---DFIHSDLALRNCQLTADLSVKIGDYG 145 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhc---CEecccccHhheEecCCCcEEEeccc
Confidence 99999765321 12356778899999999999999999 99999999999999999999999985
No 89
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=99.90 E-value=1.8e-23 Score=203.30 Aligned_cols=140 Identities=29% Similarity=0.402 Sum_probs=119.9
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHH---hcCCCCCccceeeEEecCCceEEE
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKII---SMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
|++.+.||+|+||.||+|+.. +++.||||+++.... ......+.+|++++ ..++||||+++++++...+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 556789999999999999864 589999999964421 12223466666654 567899999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|...++.. .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||-
T Consensus 81 ~E~~~~~~L~~~~~~~-----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrdlkp~Nill~~~~~~kL~Dfg 146 (324)
T cd05589 81 MEYAAGGDLMMHIHTD-----VFSEPRAVFYAACVVLGLQYLHEN---KIVYRDLKLDNLLLDTEGFVKIADFG 146 (324)
T ss_pred EcCCCCCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeEecCCCHHHeEECCCCcEEeCccc
Confidence 9999999999887642 389999999999999999999999 99999999999999999999999995
No 90
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.90 E-value=2.7e-23 Score=197.98 Aligned_cols=147 Identities=29% Similarity=0.441 Sum_probs=126.2
Q ss_pred cCCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||+||+|.. .++..||+|.++.........++.+|+++++.++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4577789999999999999974 24678999999754433334578899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCC-------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 370 VYPYMTNGSVASRLRERQS-------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~-------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
+|||+++|+|.+++..... ....+++.....++.|++.||+|||++ +|+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSH---FFVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhc---CeehhccccceEEEcCCC
Confidence 9999999999999864321 122478889999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+|++||-
T Consensus 162 ~~kl~dfg 169 (283)
T cd05090 162 HVKISDLG 169 (283)
T ss_pred cEEecccc
Confidence 99999985
No 91
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.90 E-value=2.4e-23 Score=198.92 Aligned_cols=150 Identities=27% Similarity=0.422 Sum_probs=127.4
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
+..++|++.+.||+|+||.||+|..+ .+..||+|.++..........+.+|+.+++.++||||+++++++...+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678899999999999999999743 245899998865433333446889999999999999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCC------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 366 EKLLVYPYMTNGSVASRLRERQS------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
..++||||+++|+|.++++.... .....++.....++.|++.||.|||++ +|+||||||+||++++++.++
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCCChheEEEcCCCcEE
Confidence 99999999999999999975321 123356778889999999999999998 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
++||-
T Consensus 160 L~Dfg 164 (288)
T cd05061 160 IGDFG 164 (288)
T ss_pred ECcCC
Confidence 99984
No 92
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=99.90 E-value=2e-23 Score=199.26 Aligned_cols=144 Identities=28% Similarity=0.386 Sum_probs=125.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+|+..+.||+|+||+||++... +++.||+|.+...... .....+.+|+.+++.++||||+++++.+..++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3677889999999999999864 6899999998643221 123357889999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||-
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05605 81 LMNGGDLKFHIYNMGN--PGFDEERAVFYAAEITCGLEDLHRE---RIVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred ccCCCcHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHHC---CcEecCCCHHHEEECCCCCEEEeeCC
Confidence 9999999988865322 3488999999999999999999999 99999999999999999999999985
No 93
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.90 E-value=1.2e-23 Score=197.86 Aligned_cols=140 Identities=35% Similarity=0.577 Sum_probs=120.7
Q ss_pred CCccccCCCceEEEEEeC-----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 300 KNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.+.||+|.||.||+|.+. .+..|+||.++.........+|.+|++.+.+++||||++++|++...+..++|+||+
T Consensus 4 ~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~ 83 (259)
T PF07714_consen 4 IKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYC 83 (259)
T ss_dssp EEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--
T ss_pred eeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccccc
Confidence 467999999999999875 257899999966444334568999999999999999999999999888899999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.++|.... ...+++..+..|+.|+++||+|||++ +++|+||+++||++++++.+||+||.
T Consensus 84 ~~g~L~~~L~~~~--~~~~~~~~~~~i~~~i~~~l~~Lh~~---~iiH~~l~~~nill~~~~~~Kl~~f~ 148 (259)
T PF07714_consen 84 PGGSLDDYLKSKN--KEPLSEQQRLSIAIQIAEALSYLHSN---NIIHGNLSPSNILLDSNGQVKLSDFG 148 (259)
T ss_dssp TTEBHHHHHHHTC--TTTSBHHHHHHHHHHHHHHHHHHHHT---TEEEST-SGGGEEEETTTEEEEESTT
T ss_pred ccccccccccccc--cccccccccccccccccccccccccc---cccccccccccccccccccccccccc
Confidence 9999999998862 22489999999999999999999999 99999999999999999999999984
No 94
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.90 E-value=3.4e-23 Score=195.53 Aligned_cols=144 Identities=29% Similarity=0.426 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-C---CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-D---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|++.+.||+|+||.||+|+.. + +..+|+|.++..........+.+|+.++.+++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46778899999999999999853 2 3479999986544333345789999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.+++..... .+++.+...++.|++.||+|||+. +++||||||+|||+++++.++++||-
T Consensus 84 ~e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~~l~dfg 151 (267)
T cd05066 84 TEYMENGSLDAFLRKHDG---QFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILVNSNLVCKVSDFG 151 (267)
T ss_pred EEcCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeehhhchhcEEECCCCeEEeCCCC
Confidence 999999999999976432 378999999999999999999998 99999999999999999999999984
No 95
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.90 E-value=2.3e-23 Score=207.61 Aligned_cols=149 Identities=26% Similarity=0.375 Sum_probs=126.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~ 365 (447)
..++|.+.+.||+|+||.||+|++. .++.||||+++..........+.+|++++.++. |||||++++++...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3445777899999999999999853 246899999975433333446889999999997 999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCC---------------------------------------------------------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQS--------------------------------------------------------- 388 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~--------------------------------------------------------- 388 (447)
..++|+||+++|+|.++++....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999975321
Q ss_pred -------------------------------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 389 -------------------------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 389 -------------------------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
....++|.....++.|++.||+|||+. +|+||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASK---NCVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcC---CcCcccCCcceEE
Confidence 112467888899999999999999998 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
+++++.+|++||-
T Consensus 272 l~~~~~~kL~DfG 284 (401)
T cd05107 272 ICEGKLVKICDFG 284 (401)
T ss_pred EeCCCEEEEEecC
Confidence 9999999999985
No 96
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.90 E-value=2.7e-23 Score=197.30 Aligned_cols=149 Identities=26% Similarity=0.407 Sum_probs=127.4
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
..++|+..+.||+|+||.||+|... ++..||+|.++.........++.+|+.+++.++||||+++++++.....
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4567888999999999999998753 2467999998654333334568899999999999999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCC------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceee
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
.++||||+++|+|.++++..... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCcchheEEEcCCCCEEE
Confidence 99999999999999998763221 22467888999999999999999998 9999999999999999999999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||.
T Consensus 161 ~dfg 164 (277)
T cd05062 161 GDFG 164 (277)
T ss_pred CCCC
Confidence 9985
No 97
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.90 E-value=3e-23 Score=202.17 Aligned_cols=137 Identities=27% Similarity=0.360 Sum_probs=119.2
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+++.. +++.||+|+++..... .....+.+|+.++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 5889999999754221 2233577888888766 899999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dikp~Nili~~~~~~kL~DfG 141 (329)
T cd05618 81 GDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 141 (329)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCCEEEeeCC
Confidence 99998886543 388999999999999999999999 99999999999999999999999994
No 98
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.90 E-value=6.8e-24 Score=216.52 Aligned_cols=147 Identities=26% Similarity=0.379 Sum_probs=125.1
Q ss_pred cCCCCCCccccCCCceEEEEEeCCC-cEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeE-Eec------CC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADG-KLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGF-CTT------VT 365 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~-~~~------~~ 365 (447)
.++++.++|.+|||+.||.|+...+ ..||+|++-.. .......+.+||.+|+.|+ |+|||.+++. ... .-
T Consensus 37 ~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 37 HRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred EEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 3456678999999999999997654 99999998443 2334556899999999997 9999999993 321 23
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
+.+|.||||.+|+|-+++..+... .|.+.++++|+.|+++|+++||.. .|+|||||||-|||||+.+++.|++||-.
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCcccc
Confidence 678999999999999999876443 399999999999999999999996 78899999999999999999999999964
No 99
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.90 E-value=3.1e-23 Score=201.39 Aligned_cols=137 Identities=27% Similarity=0.373 Sum_probs=116.5
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
++||+|+||.||+|+.. +++.||+|++..... ......+.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 588999999864321 122234555554 57889999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|...+.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 141 (321)
T cd05603 81 GELFFHLQRER----CFLEPRARFYAAEVASAIGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFG 141 (321)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEccCC
Confidence 99998886543 377888899999999999999998 99999999999999999999999995
No 100
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.90 E-value=5.3e-24 Score=178.55 Aligned_cols=142 Identities=23% Similarity=0.425 Sum_probs=122.9
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|.||+||+|+. .+++.||+|+++-+...++. ....+|+-+++.++|.|||++++...++...-+|+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 345567899999999999994 46899999999765443332 3578999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.. +|..+.....+ .++......++.|+++||.|+|++ ++.|||+||+|.||+.+|+.|++||-
T Consensus 83 cdq-dlkkyfdslng---~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfg 146 (292)
T KOG0662|consen 83 CDQ-DLKKYFDSLNG---DLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFG 146 (292)
T ss_pred hhH-HHHHHHHhcCC---cCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccc
Confidence 954 88888765433 378888999999999999999999 99999999999999999999999995
No 101
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.90 E-value=3.8e-23 Score=199.53 Aligned_cols=144 Identities=28% Similarity=0.337 Sum_probs=126.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|++.+.||+|+||.||+++.. ++..+|+|.++.........++.+|++++.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 36888899999999999999854 58889999886543333344688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... .+++.....++.|+++||.|||+.+ +++||||||+|||+++++.++++||-
T Consensus 81 ~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg 145 (308)
T cd06615 81 MDGGSLDQVLKKAG----RIPENILGKISIAVLRGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFG 145 (308)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhhC--CEEECCCChHHEEEecCCcEEEccCC
Confidence 99999999997653 3788999999999999999999732 79999999999999999999999984
No 102
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.90 E-value=3.6e-23 Score=200.45 Aligned_cols=137 Identities=26% Similarity=0.395 Sum_probs=116.9
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||+|.++.... ......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999964 588999999965421 1223345566666654 4899999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|..++.... .+++.....++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 81 g~L~~~~~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dlkp~Nill~~~~~~kL~Dfg 141 (316)
T cd05592 81 GDLMFHIQSSG----RFDEARARFYAAEIICGLQFLHKK---GIIYRDLKLDNVLLDKDGHIKIADFG 141 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeCCCCHHHeEECCCCCEEEccCc
Confidence 99999987643 378899999999999999999998 99999999999999999999999995
No 103
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.90 E-value=4.3e-23 Score=194.12 Aligned_cols=145 Identities=29% Similarity=0.403 Sum_probs=129.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..++|+..+.||+|++|.||+|...+++.||+|.++... ....++.+|+.++++++||||+++++++...+..+++||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT--MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTE 81 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc--ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeee
Confidence 345688889999999999999998778899999986542 234578999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++.... ...+++.....++.|++.|+.|||+. +|+||||||+||++++++.++++||.
T Consensus 82 ~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 148 (261)
T cd05068 82 LMKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQ---NYIHRDLAARNVLVGENNICKVADFG 148 (261)
T ss_pred cccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCcceEEEcCCCCEEECCcc
Confidence 999999999997643 23488999999999999999999998 99999999999999999999999985
No 104
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.90 E-value=2.9e-23 Score=201.44 Aligned_cols=137 Identities=31% Similarity=0.445 Sum_probs=119.3
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||||.++... .......+..|..++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999965 58899999986532 122334577888888766 699999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 g~L~~~i~~~~----~l~~~~~~~~~~ql~~~L~~lH~~---~ivH~dlkp~NIli~~~~~~kL~DfG 141 (320)
T cd05590 81 GDLMFHIQKSR----RFDEARARFYAAEITSALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG 141 (320)
T ss_pred chHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeeCC
Confidence 99999887653 388999999999999999999999 99999999999999999999999994
No 105
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=99.90 E-value=2.5e-23 Score=198.58 Aligned_cols=143 Identities=18% Similarity=0.288 Sum_probs=123.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|++.+.||+|+||.||+|+.+ +++.||+|+++.... ......+.+|++++..++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 36888899999999999999975 588999999865432 2223468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++++.+..+.... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 81 ~~~~~~l~~~~~~~----~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nill~~~~~~kl~Dfg 145 (287)
T cd07848 81 YVEKNMLELLEEMP----NGVPPEKVRSYIYQLIKAIHWCHKN---DIVHRDIKPENLLISHNDVLKLCDFG 145 (287)
T ss_pred cCCCCHHHHHHhcC----CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 99987766554322 2378899999999999999999998 99999999999999999999999985
No 106
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.90 E-value=3.7e-23 Score=198.31 Aligned_cols=147 Identities=28% Similarity=0.424 Sum_probs=126.0
Q ss_pred cCCCCCCccccCCCceEEEEEeCC---------------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD---------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYG 359 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~ 359 (447)
++|++.+.||+|+||.||+++... ...||+|.++..........+.+|++++.+++|+|++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 468888999999999999987532 23589999876543334456999999999999999999999
Q ss_pred EEecCCceEEEeecCCCCChhhHhhccCC--------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 360 FCTTVTEKLLVYPYMTNGSVASRLRERQS--------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 360 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~--------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
++...+..++||||+++++|.+++..... ....++|..+..++.|++.||+|||+. +++||||||+||+
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASL---NFVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhc---CeeccccChhhEE
Confidence 99999999999999999999999865321 112468899999999999999999999 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
+++++.+|++||.
T Consensus 162 l~~~~~~kl~dfg 174 (295)
T cd05097 162 VGNHYTIKIADFG 174 (295)
T ss_pred EcCCCcEEecccc
Confidence 9999999999985
No 107
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.90 E-value=3.4e-23 Score=201.31 Aligned_cols=142 Identities=25% Similarity=0.342 Sum_probs=122.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+|...+.||+|+||+||+|+.. +++.||+|.++.... ......+..|..++..+ +|++|+++++++...+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4777899999999999999865 578999999865432 12223467788887776 5899999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 E~~~~g~L~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kL~DfG 146 (323)
T cd05616 81 EYVNGGDLMYQIQQVG----RFKEPHAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred cCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEecCCCHHHeEECCCCcEEEccCC
Confidence 9999999999987643 388999999999999999999999 99999999999999999999999985
No 108
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.90 E-value=3.7e-23 Score=201.00 Aligned_cols=137 Identities=28% Similarity=0.403 Sum_probs=117.0
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +|+.||+|++..... .....++.+|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999964 689999999864321 112234455544 56789999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|..++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||.
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---givH~dikp~NIll~~~~~~kl~Dfg 141 (323)
T cd05575 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSL---NIIYRDLKPENILLDSQGHVVLTDFG 141 (323)
T ss_pred CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCCHHHeEECCCCcEEEeccC
Confidence 99999987643 378899999999999999999999 99999999999999999999999995
No 109
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.90 E-value=3.9e-23 Score=198.99 Aligned_cols=147 Identities=29% Similarity=0.477 Sum_probs=125.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc--EEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK--LVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
++|++.+.||+|+||.||+|+.+ ++. .+|+|.++..........+.+|++++.++ +||||+++++++...+..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 46788899999999999999864 344 46888776443333445788999999999 899999999999999999999
Q ss_pred eecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 371 YPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
+||+++|+|.++++.... ....+++.++..++.|++.|++|||+. +|+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhC---CccccccchheEEecCCCcE
Confidence 999999999999976421 123478999999999999999999998 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
|++||-
T Consensus 164 kl~dfg 169 (303)
T cd05088 164 KIADFG 169 (303)
T ss_pred EeCccc
Confidence 999985
No 110
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.89 E-value=3.5e-23 Score=202.89 Aligned_cols=148 Identities=30% Similarity=0.412 Sum_probs=124.1
Q ss_pred hcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC-C
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV-T 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~-~ 365 (447)
.++|++.+.||+|+||.||+|.. .+++.||||.++..........+.+|+.++..+ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45788899999999999999973 246789999997544333345688999999999 689999999988654 4
Q ss_pred ceEEEeecCCCCChhhHhhccCCC--------------------------------------------------------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSS-------------------------------------------------------- 389 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~-------------------------------------------------------- 389 (447)
..+++|||+++|+|.++++.....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 678999999999999998753210
Q ss_pred -------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 390 -------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 390 -------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++|..+..++.|+++||+|||++ +|+||||||+|||+++++.+|++||.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dikp~Nil~~~~~~~kl~dfg 224 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSENNVVKICDFG 224 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCccCeEEEcCCCcEEEEecc
Confidence 12367888899999999999999999 99999999999999999999999985
No 111
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.89 E-value=1.9e-23 Score=205.11 Aligned_cols=145 Identities=25% Similarity=0.369 Sum_probs=129.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
....|.+.+.||+|.|++|..|+.. ++..||+|.+.+...... ...+.+|+++|..++|||||+++.+.......|+|
T Consensus 54 ~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV 133 (596)
T KOG0586|consen 54 SVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLV 133 (596)
T ss_pred cccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEE
Confidence 3456888899999999999999854 699999999976543322 34589999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+.+|.+++++..... .....+..+..|+.+|++|+|++ .|||||||++|||||.++++||+||.
T Consensus 134 ~eya~~ge~~~yl~~~gr----~~e~~ar~~F~q~vsaveYcH~k---~ivHrdLk~eNilL~~~mnikIaDfg 200 (596)
T KOG0586|consen 134 MEYASGGELFDYLVKHGR----MKEKEARAKFRQIVSAVEYCHSK---NIVHRDLKAENILLDENMNIKIADFG 200 (596)
T ss_pred EEeccCchhHHHHHhccc----chhhhhhhhhHHHHHHHHHHhhc---ceeccccchhhcccccccceeeeccc
Confidence 999999999999988653 55688889999999999999999 99999999999999999999999995
No 112
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=99.89 E-value=4.5e-23 Score=199.76 Aligned_cols=137 Identities=28% Similarity=0.434 Sum_probs=118.5
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||||.++.... ......+..|..++.. .+||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 578999999865421 2223346677777775 5899999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05619 81 GDLMFHIQSCH----KFDLPRATFYAAEIICGLQFLHSK---GIVYRDLKLDNILLDTDGHIKIADFG 141 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeCCCCHHHEEECCCCCEEEccCC
Confidence 99999987643 378999999999999999999999 99999999999999999999999995
No 113
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=99.89 E-value=5.5e-23 Score=192.95 Aligned_cols=142 Identities=30% Similarity=0.446 Sum_probs=126.4
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|...+.||+|+||.||+|+..++..+|+|.++... ....++.+|+.++.+++||||+++++++...+..+++|||+
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 81 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYM 81 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc--ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcC
Confidence 3567778999999999999998777789999986432 23456899999999999999999999999888899999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++..... .+++..+..++.|++.||+|||+. +++|+||||+||++++++.+|++||.
T Consensus 82 ~~~~l~~~i~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~d~g 145 (256)
T cd05113 82 SNGCLLNYLREHGK---RFQPSQLLEMCKDVCEGMAYLESK---QFIHRDLAARNCLVDDQGCVKVSDFG 145 (256)
T ss_pred CCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCCEEECCCc
Confidence 99999999876432 488999999999999999999998 99999999999999999999999985
No 114
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.89 E-value=6.3e-23 Score=193.93 Aligned_cols=140 Identities=26% Similarity=0.350 Sum_probs=118.6
Q ss_pred ccccCCCceEEEEEeCCC---cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 302 ILGRGGFGKVYKGRLADG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
.||+|+||.||+|+..++ ..+++|.++..........+.+|+.+++.++||||+++++.+......++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 589999999999975433 34567766544333344579999999999999999999999999999999999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.++++.........++.....++.|+++||+|||+. +++||||||+|||++.++.++++||-
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nil~~~~~~~~l~Dfg 144 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKH---NFLHSDLALRNCFLTSDLTVKVGDYG 144 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CeeccCCccceEEEcCCccEEecccc
Confidence 9999986533333466777889999999999999998 99999999999999999999999985
No 115
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.89 E-value=6.7e-23 Score=193.75 Aligned_cols=141 Identities=31% Similarity=0.394 Sum_probs=120.9
Q ss_pred CccccCCCceEEEEEeCC---CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGKVYKGRLAD---GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~---~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.||+|+||.||+|...+ +..+|+|.++..........+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 358999999999998543 46799998865543333457889999999999999999999999999999999999999
Q ss_pred ChhhHhhccCC-CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|.++++.... .....++..+..++.|++.|++|||+. +++||||||+||++++++.++++||-
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dlkp~nil~~~~~~~kL~dfg 145 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKN---NFIHSDLALRNCLLTADLTVKIGDYG 145 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEECCcc
Confidence 99999976432 122467778889999999999999998 99999999999999999999999985
No 116
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.89 E-value=4.8e-23 Score=199.62 Aligned_cols=137 Identities=26% Similarity=0.399 Sum_probs=118.4
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhc-CCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISM-AVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||.||+|+.. +|+.||+|.++.... ......+..|..++.. .+||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999965 588999999965421 1223346677777765 4899999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.++|+||-
T Consensus 81 g~L~~~i~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivHrDlkp~Nil~~~~~~~kl~Dfg 141 (316)
T cd05620 81 GDLMFHIQDKG----RFDLYRATFYAAEIVCGLQFLHSK---GIIYRDLKLDNVMLDRDGHIKIADFG 141 (316)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEeCccC
Confidence 99999987643 378899999999999999999999 99999999999999999999999995
No 117
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.89 E-value=3e-23 Score=202.78 Aligned_cols=141 Identities=18% Similarity=0.357 Sum_probs=120.6
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC-----CceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~~ 368 (447)
+|++.+.||+|+||.||+|+.. +++.||||.++.... .....++.+|+++++.++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 3677889999999999999954 689999999864322 22234688999999999999999999988643 2479
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+. ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 lv~e~~~-~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~~~kL~Dfg 148 (338)
T cd07859 81 VVFELME-SDLHQVIKAND----DLTPEHHQFFLYQLLRALKYIHTA---NVFHRDLKPKNILANADCKLKICDFG 148 (338)
T ss_pred EEEecCC-CCHHHHHHhcc----cCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEccCc
Confidence 9999995 68998887543 388999999999999999999999 99999999999999999999999995
No 118
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.89 E-value=5e-23 Score=193.58 Aligned_cols=144 Identities=27% Similarity=0.415 Sum_probs=127.8
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|...++..||+|.+.... .....+.+|+.+++.++|+||+++++++...+..+++|||
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT--MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEY 82 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc--hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEec
Confidence 35688889999999999999998788899999886432 2345789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.++++.... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.++++||-
T Consensus 83 ~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 148 (261)
T cd05072 83 MAKGSLLDFLKSDEG--GKVLLPKLIDFSAQIAEGMAYIERK---NYIHRDLRAANVLVSESLMCKIADFG 148 (261)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEecCCCcEEECCCc
Confidence 999999999976422 2478899999999999999999998 99999999999999999999999984
No 119
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.89 E-value=8.4e-23 Score=190.72 Aligned_cols=138 Identities=33% Similarity=0.526 Sum_probs=123.2
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChh
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 380 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 380 (447)
++||+|+||.||+|...+++.+|+|.++..........+.+|+++++.++||||+++++++...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 46899999999999987889999999875543333446889999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 381 SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 381 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++..... .+++.....++.|++.||.|+|+. +++||||||+||++++++.++++||.
T Consensus 81 ~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g 138 (250)
T cd05085 81 SFLRKKKD---ELKTKQLVKFALDAAAGMAYLESK---NCIHRDLAARNCLVGENNVLKISDFG 138 (250)
T ss_pred HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeecccChheEEEcCCCeEEECCCc
Confidence 99875432 378999999999999999999998 99999999999999999999999984
No 120
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.89 E-value=4.4e-23 Score=200.67 Aligned_cols=137 Identities=27% Similarity=0.380 Sum_probs=117.1
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHH-HHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +|+.||+|++..... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999854 689999999864321 122234555554 46789999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|...+.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 81 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givH~Dlkp~NIll~~~~~~kL~DfG 141 (325)
T cd05604 81 GELFFHLQRER----SFPEPRARFYAAEIASALGYLHSI---NIVYRDLKPENILLDSQGHVVLTDFG 141 (325)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEEeecC
Confidence 99998886543 388999999999999999999999 99999999999999999999999995
No 121
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.89 E-value=2.8e-23 Score=212.27 Aligned_cols=144 Identities=17% Similarity=0.223 Sum_probs=124.4
Q ss_pred CCCCCccccCCCceEEEEEeC-C-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-D-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|...+.||+|+||.||+|... + ++.||+|.+.... ......+.+|+.+++.++|||||++++++...+..++||||+
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 777899999999999999843 4 6788888764332 222335788999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++........++++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~~~~~~kL~DFg 214 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSR---KMMHRDLKSANIFLMPTGIIKLGDFG 214 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCcCHHhEEECCCCcEEEEeCc
Confidence 99999998876433334588889999999999999999998 99999999999999999999999995
No 122
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.89 E-value=6.6e-23 Score=192.32 Aligned_cols=141 Identities=31% Similarity=0.437 Sum_probs=125.8
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
+|+..+.||+|+||.||++.++++..+|+|.++... ....++.+|+++++.++||||+++++++...+..++||||++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA--MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 467778999999999999998777789999985432 234468899999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|.+++..... .++|.....++.|++.||+|||+. +|+||||||+||++++++.+|++||-
T Consensus 83 ~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~kl~dfg 145 (256)
T cd05059 83 NGCLLNYLRERKG---KLGTEWLLDMCSDVCEAMEYLESN---GFIHRDLAARNCLVGEDNVVKVSDFG 145 (256)
T ss_pred CCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHhhEEECCCCcEEECCcc
Confidence 9999999976432 478999999999999999999999 99999999999999999999999984
No 123
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.89 E-value=3.7e-23 Score=200.99 Aligned_cols=142 Identities=25% Similarity=0.338 Sum_probs=122.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 371 (447)
+|+..+.||+|+||+||+|+.. +++.||+|+++.... ......+..|..++..+. |++|+++.+++...+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3667789999999999999864 589999999865421 222345778888888875 567888999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 Ey~~~g~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivHrDikp~Nill~~~~~ikL~Dfg 146 (323)
T cd05615 81 EYVNGGDLMYHIQQVG----KFKEPQAVFYAAEISVGLFFLHRR---GIIYRDLKLDNVMLDSEGHIKIADFG 146 (323)
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEeccc
Confidence 9999999999987643 388999999999999999999999 99999999999999999999999985
No 124
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.89 E-value=6.8e-23 Score=193.26 Aligned_cols=147 Identities=18% Similarity=0.277 Sum_probs=127.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||||.++.... ......+.+|+++++.++||||+++++++...+..++++
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 46888899999999999999854 689999998754322 222346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.........+++.....++.|+++||+|||+. +++||||||+||+++.++.++++||-
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~nil~~~~~~~~l~d~g 151 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCCHHHEEEcCCCCEEECccc
Confidence 99999999998865433333478888999999999999999998 99999999999999999999999985
No 125
>PHA02988 hypothetical protein; Provisional
Probab=99.89 E-value=1.1e-22 Score=193.99 Aligned_cols=151 Identities=18% Similarity=0.278 Sum_probs=124.8
Q ss_pred cccccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceee
Q 013258 282 LKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYG 359 (447)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~ 359 (447)
.+.++.++++ ......||+|++|.||+|.+ +|+.||||.++....... ...|.+|+.++.+++||||++++|
T Consensus 12 ~~~i~~~~i~-----~~~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g 85 (283)
T PHA02988 12 IKCIESDDID-----KYTSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYG 85 (283)
T ss_pred ceecCHHHcC-----CCCCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEee
Confidence 4445555552 22236799999999999998 688999999975432221 246889999999999999999999
Q ss_pred EEec----CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 360 FCTT----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 360 ~~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
++.+ ....++||||+++|+|.+++.... .++|.....++.|++.||.|||+.. +++||||||+|||++++
T Consensus 86 ~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~--~~~Hrdlkp~nill~~~ 159 (283)
T PHA02988 86 FIIDIVDDLPRLSLILEYCTRGYLREVLDKEK----DLSFKTKLDMAIDCCKGLYNLYKYT--NKPYKNLTSVSFLVTEN 159 (283)
T ss_pred eEEecccCCCceEEEEEeCCCCcHHHHHhhCC----CCChhHHHHHHHHHHHHHHHHHhcC--CCCCCcCChhhEEECCC
Confidence 9876 346789999999999999997643 3889999999999999999999732 68899999999999999
Q ss_pred Cceeecccc
Q 013258 436 ADQSSKTIL 444 (447)
Q Consensus 436 ~~~~i~df~ 444 (447)
+.+|++||-
T Consensus 160 ~~~kl~dfg 168 (283)
T PHA02988 160 YKLKIICHG 168 (283)
T ss_pred CcEEEcccc
Confidence 999999984
No 126
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.89 E-value=4.1e-23 Score=205.57 Aligned_cols=136 Identities=24% Similarity=0.291 Sum_probs=121.6
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..+|++.+.||+|+||.||+|.. .+++.||+|.... ..+.+|+++++.++||||+++++++......++|+|
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~-------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e 163 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR-------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILP 163 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh-------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEe
Confidence 35799999999999999999985 4689999996532 247899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+. ++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 164 ~~~-~~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~ylH~~---~IvHrDiKP~NIll~~~~~vkL~DFG 227 (391)
T PHA03212 164 RYK-TDLYCYLAAKR----NIAICDILAIERSVLRAIQYLHEN---RIIHRDIKAENIFINHPGDVCLGDFG 227 (391)
T ss_pred cCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHhEEEcCCCCEEEEeCC
Confidence 995 68888886543 378999999999999999999999 99999999999999999999999995
No 127
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.89 E-value=5.9e-23 Score=195.08 Aligned_cols=147 Identities=31% Similarity=0.511 Sum_probs=127.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|.+.+.||+|+||.||+|...+ ++.||||.++..........+.+|++++..++|+||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457778999999999999998532 47899999875543334567999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCC----------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 369 LVYPYMTNGSVASRLRERQS----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
+||||+++|+|.++++.... ....+++.....++.|++.|++|||+. +++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQ---HFVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeeccccccceEEEcCCCeE
Confidence 99999999999999976421 223478899999999999999999999 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
+++||-
T Consensus 162 kl~d~g 167 (280)
T cd05049 162 KIGDFG 167 (280)
T ss_pred EECCcc
Confidence 999985
No 128
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.89 E-value=8.3e-23 Score=194.73 Aligned_cols=143 Identities=27% Similarity=0.432 Sum_probs=124.5
Q ss_pred CCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 368 (447)
.|++.+.||+|+||.||+++. .++..||+|.++..........+.+|+++++.++||||+++.+++... ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 367788999999999999974 247889999987554333445799999999999999999999998775 5689
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++++|.+++.... ..++|..+..++.|++.||+|||++ +|+||||||+||++++++.++++||.
T Consensus 85 lv~e~~~g~~L~~~l~~~~---~~~~~~~~~~i~~~i~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~~~l~dfg 154 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNK---NKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 154 (284)
T ss_pred EEEEccCCCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecccchheEEEcCCCCEEECCCc
Confidence 9999999999999986542 2479999999999999999999999 99999999999999999999999985
No 129
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.89 E-value=1.5e-23 Score=190.41 Aligned_cols=145 Identities=25% Similarity=0.386 Sum_probs=127.9
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
+++|+-.-|+ +.||+|+|+.|--+. ..+|..||||++.+. ....+.+..+|++++..+ .|+||++|+++|.+
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-PGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcC-CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 4566666666 789999999999998 678999999999654 334456789999999888 59999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceee
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSS 440 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i 440 (447)
+...|||||-|.||.|.+++++++. +++.++.++..+|+.||.|||.+ +|.|||+||+|||..+-. -+||
T Consensus 148 d~~FYLVfEKm~GGplLshI~~~~~----F~E~EAs~vvkdia~aLdFlH~k---gIAHRDlKPENiLC~~pn~vsPvKi 220 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQKRKH----FNEREASRVVKDIASALDFLHTK---GIAHRDLKPENILCESPNKVSPVKI 220 (463)
T ss_pred cceEEEEEecccCchHHHHHHHhhh----ccHHHHHHHHHHHHHHHHHHhhc---CcccccCCccceeecCCCCcCceee
Confidence 9999999999999999999998765 89999999999999999999999 999999999999987644 5799
Q ss_pred ccc
Q 013258 441 KTI 443 (447)
Q Consensus 441 ~df 443 (447)
+||
T Consensus 221 CDf 223 (463)
T KOG0607|consen 221 CDF 223 (463)
T ss_pred ecc
Confidence 998
No 130
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=99.89 E-value=5e-23 Score=197.06 Aligned_cols=150 Identities=30% Similarity=0.453 Sum_probs=128.5
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
...++|+..+.||+|+||.||++...+ ...+|+|.++.........++.+|+.++.++ +|+||+++++++...
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 345568888999999999999998532 3689999987543333345688999999999 899999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccC------------CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..+++|||+++|+|.++++... .....+++..+..++.|++.||+|||+. +|+||||||+||++
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASK---KCIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CccccccceeeEEE
Confidence 99999999999999999997532 1234588999999999999999999998 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.+|++||-
T Consensus 166 ~~~~~~kL~Dfg 177 (293)
T cd05053 166 TEDHVMKIADFG 177 (293)
T ss_pred cCCCeEEeCccc
Confidence 999999999995
No 131
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.89 E-value=8.2e-23 Score=196.02 Aligned_cols=147 Identities=27% Similarity=0.412 Sum_probs=126.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-----------------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-----------------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRL 357 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l 357 (447)
++|++.+.||+|+||.||+++.. ++..||+|.++.........++.+|+++++.++|+||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 46888899999999999998532 2346899998754333344579999999999999999999
Q ss_pred eeEEecCCceEEEeecCCCCChhhHhhccCCC-------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCce
Q 013258 358 YGFCTTVTEKLLVYPYMTNGSVASRLRERQSS-------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANI 430 (447)
Q Consensus 358 ~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NI 430 (447)
++++...+..+++|||+++|+|.+++...... ...+++.....++.|++.||+|||+. +++||||||+||
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dlkp~Ni 161 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSL---NFVHRDLATRNC 161 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHC---CeecccCChheE
Confidence 99999999999999999999999998764321 12377889999999999999999999 999999999999
Q ss_pred eeCCCCceeecccc
Q 013258 431 LLDEDADQSSKTIL 444 (447)
Q Consensus 431 Ll~~~~~~~i~df~ 444 (447)
|+++++.++++||.
T Consensus 162 li~~~~~~~l~dfg 175 (296)
T cd05095 162 LVGKNYTIKIADFG 175 (296)
T ss_pred EEcCCCCEEeccCc
Confidence 99999999999985
No 132
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.89 E-value=6.2e-23 Score=217.07 Aligned_cols=147 Identities=22% Similarity=0.340 Sum_probs=126.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||+|+++...... ...++.+|+++++.++||||+++++++...+..+++|
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 46888899999999999999965 58999999996543222 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCC-------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQS-------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .....++..+..++.|+++||+|||+. +|+||||||+|||++.++.++++||-
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~---GIIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSK---GVLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHC---CccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 112356778899999999999999999 99999999999999999999999985
No 133
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.89 E-value=8.9e-23 Score=195.89 Aligned_cols=147 Identities=25% Similarity=0.431 Sum_probs=125.6
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-Cc--EEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-GK--LVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
++|++.+.||+|+||+||+|...+ +. .+++|.++..........+.+|++++.++ +||||+++++++...+..+++
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 468888999999999999998653 33 47899887543333445689999999999 799999999999999999999
Q ss_pred eecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 371 YPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
+||+++|+|.++++.... ....+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEK---QFIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCcCCcceEEECCCCeE
Confidence 999999999999976421 112478899999999999999999998 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
|++||-
T Consensus 159 kl~dfg 164 (297)
T cd05089 159 KIADFG 164 (297)
T ss_pred EECCcC
Confidence 999995
No 134
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.89 E-value=1.1e-22 Score=193.58 Aligned_cols=147 Identities=31% Similarity=0.493 Sum_probs=126.5
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-C-----cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-G-----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|+..+.||+|+||.||+|.... + ..||+|.++.........++.+|+.++..++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357778999999999999998533 2 5799999875543333456899999999999999999999999988999
Q ss_pred EEeecCCCCChhhHhhccCCC------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 369 LVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
++|||+++|+|.+++...... ...+++.....++.|++.||+|||+. +++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSH---HFVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccccceEEEcCCC
Confidence 999999999999999764211 13478889999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.++|+||.
T Consensus 162 ~~~L~dfg 169 (283)
T cd05048 162 TVKISDFG 169 (283)
T ss_pred cEEECCCc
Confidence 99999985
No 135
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=99.89 E-value=8e-23 Score=198.83 Aligned_cols=137 Identities=28% Similarity=0.368 Sum_probs=115.8
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHH-HHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEV-KIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~-~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||+|++..... ......+..|. .+++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999965 578899999864321 11223444444 456788999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+.+.....++.|+++||+|||+. +|+||||||+|||+++++.+||+||.
T Consensus 81 ~~L~~~~~~~~----~~~~~~~~~~~~qi~~~L~~lH~~---giiHrDlkp~Nili~~~~~~kl~DfG 141 (325)
T cd05602 81 GELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFG 141 (325)
T ss_pred CcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCHHHeEECCCCCEEEccCC
Confidence 99999987643 267888889999999999999999 99999999999999999999999995
No 136
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.89 E-value=6.8e-23 Score=199.49 Aligned_cols=137 Identities=28% Similarity=0.362 Sum_probs=119.9
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|+.. +++.||+|+++..... .....+.+|+.++.++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999964 5789999999754322 2233578899998887 699999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (327)
T cd05617 81 GDLMFHMQRQR----KLPEEHARFYAAEICIALNFLHER---GIIYRDLKLDNVLLDADGHIKLTDYG 141 (327)
T ss_pred CcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEeCCCCEEEeccc
Confidence 99998886543 389999999999999999999999 99999999999999999999999994
No 137
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.89 E-value=9.2e-23 Score=196.43 Aligned_cols=149 Identities=28% Similarity=0.438 Sum_probs=127.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
..++|.+.+.||+|+||.||+|+.. ++..||+|.++.........++.+|+.++..+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3566788899999999999999741 24579999986543333445789999999999 89999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCC------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
....+++|||+++|+|.+++...... ...++|..+..++.|+++||+|||++ +|+||||||+||+
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQ---KCIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHC---CeeecccccceEE
Confidence 99999999999999999999764221 12478889999999999999999999 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
+++++.+|++||-
T Consensus 170 i~~~~~~kl~D~g 182 (304)
T cd05101 170 VTENNVMKIADFG 182 (304)
T ss_pred EcCCCcEEECCCc
Confidence 9999999999985
No 138
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.89 E-value=1.1e-22 Score=193.74 Aligned_cols=143 Identities=27% Similarity=0.438 Sum_probs=123.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 367 (447)
.+|++.+.||+|+||.||++... +++.||+|.++... ......+.+|+++++.++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 82 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 82 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCce
Confidence 46778899999999999999742 47899999986442 2234468999999999999999999998754 3467
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+||+++|+|.+++..... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.++++||-
T Consensus 83 ~lv~e~~~~~~L~~~l~~~~~---~l~~~~~~~~~~~l~~aL~~LH~~---~i~H~dlkp~nili~~~~~~~l~dfg 153 (284)
T cd05081 83 RLVMEYLPYGSLRDYLQKHRE---RLDHRKLLLYASQICKGMEYLGSK---RYVHRDLATRNILVESENRVKIGDFG 153 (284)
T ss_pred EEEEEecCCCCHHHHHHhcCc---CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHhhEEECCCCeEEECCCc
Confidence 899999999999999975432 388999999999999999999999 99999999999999999999999985
No 139
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.89 E-value=9e-23 Score=197.87 Aligned_cols=137 Identities=30% Similarity=0.425 Sum_probs=119.9
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+++.. +++.||||+++.... ......+.+|.+++..+ +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999865 588999999975421 22234577888888877 799999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|...+.... .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++|+||.
T Consensus 81 ~~L~~~~~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kl~Dfg 141 (318)
T cd05570 81 GDLMFHIQRSG----RFDEPRARFYAAEIVLGLQFLHER---GIIYRDLKLDNVLLDSEGHIKIADFG 141 (318)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEccCCCHHHeEECCCCcEEecccC
Confidence 99998887643 389999999999999999999999 99999999999999999999999985
No 140
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.89 E-value=1.1e-22 Score=194.39 Aligned_cols=146 Identities=32% Similarity=0.442 Sum_probs=124.8
Q ss_pred CCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+|++.+.||+|+||.||+|+.. ....+|+|.++.........++.+|+.+++.++||||+++++.+...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4677899999999999999852 2357899988655433334578899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCC--------------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 370 VYPYMTNGSVASRLRERQS--------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
++||+.+|+|.+++..... ....+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEM---KLVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHC---Ceehhhhhhhe
Confidence 9999999999999865321 113478899999999999999999998 99999999999
Q ss_pred eeeCCCCceeecccc
Q 013258 430 ILLDEDADQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~~~~i~df~ 444 (447)
||+++++.+|++||-
T Consensus 158 ill~~~~~~kl~dfg 172 (290)
T cd05045 158 VLVAEGRKMKISDFG 172 (290)
T ss_pred EEEcCCCcEEecccc
Confidence 999999999999984
No 141
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.89 E-value=6.2e-23 Score=192.88 Aligned_cols=145 Identities=30% Similarity=0.445 Sum_probs=129.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
..+|+..+.||+|+||.||+|...+++.+|+|.++.... ....++.+|+.+++.++|+||+++++++...+..++||||
T Consensus 5 ~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 5 REEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDL-LKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred HHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccch-hhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 456778899999999999999987789999999865432 2344688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.++++.... ..+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++||.
T Consensus 84 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~h~dl~~~nilv~~~~~~kl~d~g 149 (261)
T cd05148 84 MEKGSLLAFLRSPEG--QVLPVASLIDMACQVAEGMAYLEEQ---NSIHRDLAARNILVGEDLVCKVADFG 149 (261)
T ss_pred cccCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccCcceEEEcCCceEEEcccc
Confidence 999999999976432 3478999999999999999999998 99999999999999999999999985
No 142
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.89 E-value=1.4e-22 Score=191.06 Aligned_cols=147 Identities=20% Similarity=0.301 Sum_probs=129.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|... +|+.||+|.++.... ......+.+|++++++++|+|++++++++...+..+++|
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57888899999999999999975 789999998864322 222456899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||++++++.++++||.
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~nil~~~~~~~~l~d~~ 151 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSK---RIMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecCCcChhhEEECCCCcEEEeccc
Confidence 99999999999876433334588999999999999999999998 99999999999999999999999985
No 143
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.89 E-value=9.5e-23 Score=192.65 Aligned_cols=143 Identities=29% Similarity=0.450 Sum_probs=125.3
Q ss_pred CCCCCCccccCCCceEEEEEeCC-C---cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLAD-G---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~-~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+|+..+.||+|+||.||+|+... + ..||||.++.........+|..|+.+++.++||||+++++++......++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 46677899999999999998643 3 3699999875433334457999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||-
T Consensus 85 e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~~l~~al~~lH~~---g~~H~dl~p~nili~~~~~~kl~dfg 151 (269)
T cd05065 85 EFMENGALDSFLRQNDG---QFTVIQLVGMLRGIAAGMKYLSEM---NYVHRDLAARNILVNSNLVCKVSDFG 151 (269)
T ss_pred ecCCCCcHHHHHhhCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccChheEEEcCCCcEEECCCc
Confidence 99999999999876432 378999999999999999999998 99999999999999999999999985
No 144
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.89 E-value=8.4e-23 Score=197.02 Aligned_cols=148 Identities=30% Similarity=0.429 Sum_probs=127.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
.++|.+.+.||+|+||.||+++.. +...+|+|.++.........++.+|++++..+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 356888899999999999999742 23579999997543333345688899999999 799999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..++||||+++|+|.+++..... ....++|..+..++.|++.||+|||+. +++||||||+||++
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CcccccccHHheEE
Confidence 999999999999999999976432 112488999999999999999999998 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.++++||.
T Consensus 174 ~~~~~~kL~dfg 185 (307)
T cd05098 174 TEDNVMKIADFG 185 (307)
T ss_pred cCCCcEEECCCc
Confidence 999999999985
No 145
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.89 E-value=5.5e-23 Score=200.94 Aligned_cols=149 Identities=32% Similarity=0.441 Sum_probs=124.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC-
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV- 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~- 364 (447)
..++|++.+.||+|+||.||+|+.. +++.||+|.++..........+.+|+.++.++ +|+||++++++|...
T Consensus 5 ~~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~ 84 (337)
T cd05054 5 PRDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPG 84 (337)
T ss_pred CHHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCC
Confidence 3457888999999999999999632 24789999987543333344688899999999 899999999988654
Q ss_pred CceEEEeecCCCCChhhHhhccCCC-------------------------------------------------------
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSS------------------------------------------------------- 389 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------------------------- 389 (447)
...++++||+++|+|.+++......
T Consensus 85 ~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (337)
T cd05054 85 GPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDE 164 (337)
T ss_pred CCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhH
Confidence 5678999999999999998643210
Q ss_pred --CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 390 --LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 390 --~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++|..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||-
T Consensus 165 ~~~~~l~~~~~~~~~~qi~~aL~~lH~~---~ivHrDikp~Nill~~~~~vkL~DfG 218 (337)
T cd05054 165 LYKEPLTLEDLISYSFQVARGMEFLASR---KCIHRDLAARNILLSENNVVKICDFG 218 (337)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEeCCCcEEEeccc
Confidence 12578999999999999999999999 99999999999999999999999985
No 146
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.89 E-value=8.9e-23 Score=202.29 Aligned_cols=141 Identities=26% Similarity=0.331 Sum_probs=121.9
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----ceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 368 (447)
+|+..+.||+|+||.||+++. .+++.||||.+..... .....++.+|+++++.++||||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 477889999999999999996 4689999999864321 123346889999999999999999999998776 789
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+||+. ++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 81 lv~e~~~-~~l~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivH~dlkp~Nili~~~~~~kL~Dfg 148 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ----PLSSDHVKVFLYQILRGLKYLHSA---GILHRDIKPGNLLVNSNCVLKICDFG 148 (372)
T ss_pred EEeeccc-cCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChHHEEECCCCCEEecccc
Confidence 9999996 57888775432 388999999999999999999999 99999999999999999999999995
No 147
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.89 E-value=1.1e-22 Score=195.48 Aligned_cols=143 Identities=27% Similarity=0.450 Sum_probs=125.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||+|+.. +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 46788899999999999999865 58899999986544333445678999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. ++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||.
T Consensus 86 ~~-~~l~~~l~~~~~---~~~~~~~~~~~~qi~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 149 (301)
T cd07873 86 LD-KDLKQYLDDCGN---SINMHNVKLFLFQLLRGLNYCHRR---KVLHRDLKPQNLLINERGELKLADFG 149 (301)
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHHHEEECCCCcEEECcCc
Confidence 97 589888876432 378899999999999999999998 99999999999999999999999995
No 148
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.89 E-value=1.4e-22 Score=192.82 Aligned_cols=143 Identities=27% Similarity=0.416 Sum_probs=120.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||+||+|.+. +++ .+++|.+..........++..|+..++.++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 45777899999999999999863 344 4788877543322233467888889999999999999998754 45789
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++|+|.+++..... .++|.....++.|++.||+|||+. +++||||||+|||+++++.+|++||.
T Consensus 86 i~e~~~~gsL~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~kl~Dfg 154 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRD---SLDPQRLLNWCVQIAKGMYYLEEH---RMVHRNLAARNILLKSDSIVQIADFG 154 (279)
T ss_pred EEEeCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEeccccCcceEEEcCCCcEEEcCCc
Confidence 9999999999999976432 488999999999999999999998 99999999999999999999999985
No 149
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.89 E-value=8e-23 Score=195.19 Aligned_cols=148 Identities=30% Similarity=0.488 Sum_probs=128.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|+..+.||+|+||.||+++.. ++..||+|.++.........++.+|+.++++++||||+++++++...+..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467888899999999999999853 46789999987544333345699999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCC------------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 368 LLVYPYMTNGSVASRLRERQS------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
++++||+++|+|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~---~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSER---KFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CeecccccHhh
Confidence 999999999999999975321 112478889999999999999999998 99999999999
Q ss_pred eeeCCCCceeecccc
Q 013258 430 ILLDEDADQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~~~~i~df~ 444 (447)
|++++++.++++||-
T Consensus 161 il~~~~~~~~l~dfg 175 (288)
T cd05050 161 CLVGENMVVKIADFG 175 (288)
T ss_pred eEecCCCceEECccc
Confidence 999999999999985
No 150
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.89 E-value=1.5e-22 Score=192.46 Aligned_cols=144 Identities=28% Similarity=0.455 Sum_probs=124.1
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
.++|+..+.||+|+||+||+|++ .+++ .||+|.++.........++.+|+.++..++||||+++++++.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 35678889999999999999985 3444 4899998755444445578899999999999999999999875 4578
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++||+++|+|.++++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+|++||.
T Consensus 85 l~~~~~~~g~l~~~l~~~~~---~~~~~~~~~~~~qi~~~L~~lH~~---~iiH~dlkp~Nil~~~~~~~kL~dfG 154 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKD---RIGSQDLLNWCVQIAKGMSYLEEV---RLVHRDLAARNVLVKSPNHVKITDFG 154 (279)
T ss_pred EEEEcCCCCCHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEEcCCCcEEECCCC
Confidence 99999999999999976432 388999999999999999999999 99999999999999999999999995
No 151
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.89 E-value=1.3e-22 Score=197.63 Aligned_cols=141 Identities=23% Similarity=0.300 Sum_probs=121.7
Q ss_pred CCCccccC--CCceEEEEEe-CCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 299 NKNILGRG--GFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 299 ~~~~lg~G--~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
..++||+| +|++||+++. .+|+.||+|+++...... ....+.+|+++++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 6789999985 468999999996543322 2335778999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+++.||.
T Consensus 82 ~~~~l~~~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~iiH~dlkp~Nil~~~~~~~~l~~~~ 146 (327)
T cd08227 82 AYGSAKDLICTHFM--DGMSELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR 146 (327)
T ss_pred CCCcHHHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCChhhEEEecCCcEEEcccc
Confidence 99999999875422 2378999999999999999999998 99999999999999999999999873
No 152
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.89 E-value=1.2e-22 Score=192.44 Aligned_cols=147 Identities=25% Similarity=0.473 Sum_probs=126.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|+..+.||+|+||+||+|+.+ +.+.|++|.+...........+.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56788899999999999999853 246799998854332223457899999999999999999999999989999
Q ss_pred EEeecCCCCChhhHhhccCCCC-----CCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSL-----PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~-----~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
+||||+++|+|.+++....... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNA---RFVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhc---CcccCcCccceEEEeCCCcEEEccc
Confidence 9999999999999997654211 2489999999999999999999998 9999999999999999999999987
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 162 ~ 162 (275)
T cd05046 162 S 162 (275)
T ss_pred c
Confidence 4
No 153
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.89 E-value=3.4e-23 Score=191.79 Aligned_cols=142 Identities=24% Similarity=0.378 Sum_probs=122.0
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcc-cccccccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLK-EERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~-~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 367 (447)
..|...+.||+|+||.|+.+.. .+|+.||||.+. ........++..+|+++++.++|+||+.+.+.+.. -+..
T Consensus 22 ~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~Dv 101 (359)
T KOG0660|consen 22 RYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDV 101 (359)
T ss_pred ceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeeccccccccccee
Confidence 3455568899999999999985 468999999985 33333445578899999999999999999998765 3568
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|+|+|+ -+|...++.... ++......+..|+++||.|+|+. +|+||||||+|+|++.+.+.||+||.
T Consensus 102 YiV~elMe-tDL~~iik~~~~----L~d~H~q~f~YQiLrgLKyiHSA---nViHRDLKPsNll~n~~c~lKI~DFG 170 (359)
T KOG0660|consen 102 YLVFELME-TDLHQIIKSQQD----LTDDHAQYFLYQILRGLKYIHSA---NVIHRDLKPSNLLLNADCDLKICDFG 170 (359)
T ss_pred EEehhHHh-hHHHHHHHcCcc----ccHHHHHHHHHHHHHhcchhhcc---cccccccchhheeeccCCCEEecccc
Confidence 99999994 589999876543 88899999999999999999999 99999999999999999999999995
No 154
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=99.89 E-value=9.9e-23 Score=193.24 Aligned_cols=148 Identities=28% Similarity=0.429 Sum_probs=127.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|.+.+.||+|+||.||+|...+ +..||+|.+...........+.+|+.++..++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4568888999999999999998542 3689999986543333345688999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCC------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 368 LLVYPYMTNGSVASRLRERQSS------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
++||||+++|+|.+++...... ...++|..+..++.|++.||.|||+. +|+||||||+||++++++.+|++
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAK---KFVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CccccccChheEEEcCCCCEEEC
Confidence 9999999999999999754321 12478899999999999999999998 99999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 162 dfg 164 (277)
T cd05032 162 DFG 164 (277)
T ss_pred Ccc
Confidence 984
No 155
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.89 E-value=2.1e-22 Score=189.21 Aligned_cols=135 Identities=24% Similarity=0.368 Sum_probs=117.6
Q ss_pred cccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||.||+|.+. ++..||+|.++..........+.+|+.++++++||||+++++++. .+..++||||+++|+|
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~~~~L 81 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMASGGPL 81 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCCCCCH
Confidence 899999999999753 355799999876543333456899999999999999999999875 4578999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++.... ..+++..+..++.|++.||+|||++ +++||||||+|||++.++.+|++||-
T Consensus 82 ~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg 140 (257)
T cd05115 82 NKFLSGKK---DEITVSNVVELMHQVSMGMKYLEGK---NFVHRDLAARNVLLVNQHYAKISDFG 140 (257)
T ss_pred HHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhc---CeeecccchheEEEcCCCcEEeccCC
Confidence 99987543 2488999999999999999999998 99999999999999999999999984
No 156
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.89 E-value=1.9e-22 Score=191.65 Aligned_cols=137 Identities=26% Similarity=0.350 Sum_probs=118.7
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||+||+++.+ +|+.||+|.+...... .....+..|++++.+++||||+++++++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999864 5899999998643221 1233466799999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+||-
T Consensus 81 ~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~~l~Dfg 140 (277)
T cd05607 81 KYHIYNVGE--RGLEMERVIHYSAQITCGILHLHSM---DIVYRDMKPENVLLDDQGNCRLSDLG 140 (277)
T ss_pred HHHHHhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CEEEccCChHhEEEcCCCCEEEeece
Confidence 988865432 2378999999999999999999998 99999999999999999999999985
No 157
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.89 E-value=1.9e-22 Score=190.24 Aligned_cols=142 Identities=27% Similarity=0.410 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|++.+.||+|+||.||+|+. .+++.||+|+++... ......+.+|+.++..++||||+++++++...+..++|+||
T Consensus 9 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 9 HDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEP-GDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCc-cchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 4688889999999999999996 468899999986432 22334578999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.++++... .+++..+..++.|++.||.|||+. +|+|||+||+||++++++.++++||-
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg 151 (267)
T cd06646 88 CGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLAYLHSK---GKMHRDIKGANILLTDNGDVKLADFG 151 (267)
T ss_pred CCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCCEEECcCc
Confidence 99999999987543 378999999999999999999998 99999999999999999999999984
No 158
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.89 E-value=1.8e-22 Score=190.15 Aligned_cols=143 Identities=29% Similarity=0.411 Sum_probs=126.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|...+.||+|+||.||+|... +++.||+|.++.. .....++.+|++++..++||||+++++++...+..+++|||
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED--TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEF 83 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC--chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEe
Confidence 34677789999999999999864 5889999998643 22345689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++..... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++||-
T Consensus 84 ~~~~~L~~~~~~~~~--~~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~df~ 149 (263)
T cd05052 84 MTYGNLLDYLRECNR--QEVNAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFG 149 (263)
T ss_pred CCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCcEEeCCCc
Confidence 999999999876432 3488999999999999999999998 99999999999999999999999985
No 159
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=5e-23 Score=210.76 Aligned_cols=149 Identities=20% Similarity=0.229 Sum_probs=126.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----- 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 365 (447)
..++|.+.+.||+|+||+||+|+. .+++.||||.+..... ......+.+|+..+..++|+||+++++.+...+
T Consensus 30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~ 109 (496)
T PTZ00283 30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPE 109 (496)
T ss_pred cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcc
Confidence 346788899999999999999985 4689999999865432 223346889999999999999999987765432
Q ss_pred ---ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 366 ---EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 366 ---~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
..++||||+++|+|.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+|
T Consensus 110 ~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~---~IiHrDLKP~NILl~~~~~vkL~D 186 (496)
T PTZ00283 110 NVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSK---HMIHRDIKSANILLCSNGLVKLGD 186 (496)
T ss_pred cceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEeCCCCEEEEe
Confidence 36799999999999999976544445688999999999999999999999 999999999999999999999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 187 FG 188 (496)
T PTZ00283 187 FG 188 (496)
T ss_pred cc
Confidence 95
No 160
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.88 E-value=2e-22 Score=193.14 Aligned_cols=148 Identities=28% Similarity=0.398 Sum_probs=128.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-----------------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-----------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 356 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 356 (447)
.++|++.+.||+|+||.||+|+... +..||+|.+...........+.+|++++.+++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3568888999999999999987532 24689999875544344557899999999999999999
Q ss_pred eeeEEecCCceEEEeecCCCCChhhHhhccCC-------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 357 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQS-------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 357 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~-------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
+++++...+..++++||+++++|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~---~i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESL---NFVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHc---Cccccccchhc
Confidence 99999999999999999999999999976531 112488999999999999999999998 99999999999
Q ss_pred eeeCCCCceeecccc
Q 013258 430 ILLDEDADQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~~~~i~df~ 444 (447)
|++++++.++++||-
T Consensus 161 ili~~~~~~~l~dfg 175 (296)
T cd05051 161 CLVGKNYTIKIADFG 175 (296)
T ss_pred eeecCCCceEEcccc
Confidence 999999999999985
No 161
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=99.88 E-value=2.1e-22 Score=188.80 Aligned_cols=143 Identities=30% Similarity=0.487 Sum_probs=128.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|... |+.||+|.++.... ...++.+|+.+++.++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 81 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST--AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEY 81 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh--HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEe
Confidence 356788899999999999999874 78999999965532 355789999999999999999999999988999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++..... ..+++.....++.|++.||.|||+. +++||||||+||++++++.++++||-
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~Nili~~~~~~~l~d~g 147 (256)
T cd05039 82 MAKGSLVDYLRSRGR--AVITLAQQLGFALDVCEGMEYLEEK---NFVHRDLAARNVLVSEDLVAKVSDFG 147 (256)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccchhcccceEEEeCCCCEEEcccc
Confidence 999999999976532 2489999999999999999999999 99999999999999999999999985
No 162
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=99.88 E-value=1.8e-22 Score=190.57 Aligned_cols=145 Identities=28% Similarity=0.493 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CC---cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.++.........++..|++++..++||||+++.+++...+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 346777899999999999999864 23 37999998654333334578999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++++|.+++.... ..+++..+..++.|++.|++|||+. +++||||||+||++++++.++++||.
T Consensus 84 v~e~~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 152 (268)
T cd05063 84 ITEYMENGALDKYLRDHD---GEFSSYQLVGMLRGIAAGMKYLSDM---NYVHRDLAARNILVNSNLECKVSDFG 152 (268)
T ss_pred EEEcCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhhEEEcCCCcEEECCCc
Confidence 999999999999987643 2388999999999999999999998 99999999999999999999999985
No 163
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.88 E-value=2.1e-22 Score=192.42 Aligned_cols=143 Identities=29% Similarity=0.492 Sum_probs=118.0
Q ss_pred CCCCCCccccCCCceEEEEEe-C-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEec-----C
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-A-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCTT-----V 364 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~ 364 (447)
+|++.+.||+|+||+||+|+. . +++.||+|.++...... ....+.+|+.+++.+ +||||+++++++.. .
T Consensus 2 ~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~ 81 (290)
T cd07862 2 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRE 81 (290)
T ss_pred CcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCC
Confidence 688889999999999999986 3 46889999986443222 233566777777655 69999999998852 3
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++||||+. ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|++||-
T Consensus 82 ~~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~---~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 82 TKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CcEEEEEccCC-CCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 46899999996 689999875432 2478999999999999999999999 99999999999999999999999994
No 164
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.88 E-value=2.1e-23 Score=185.74 Aligned_cols=145 Identities=26% Similarity=0.350 Sum_probs=125.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc---c----HHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG---G----ELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~---~----~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
..+.|...+.+|+|..+.|.++.. .+|+.+|+|++....... . ...-.+|+.+|+++ .||+|+++.++|++
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 445678889999999999999874 568999999985432211 1 12356799999887 69999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
+...++|+|.|+.|.|+++|.+.. .+++....+|+.|+..|++|||.+ +||||||||+|||+|++.+++|+||
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~V----tlSEK~tR~iMrqlfegVeylHa~---~IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKV----TLSEKETRRIMRQLFEGVEYLHAR---NIVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhe----eecHHHHHHHHHHHHHHHHHHHHh---hhhhcccChhheeeccccceEEecc
Confidence 999999999999999999998754 388999999999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
.
T Consensus 168 G 168 (411)
T KOG0599|consen 168 G 168 (411)
T ss_pred c
Confidence 4
No 165
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.88 E-value=2e-22 Score=191.54 Aligned_cols=143 Identities=27% Similarity=0.484 Sum_probs=124.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||.||+|... +|+ .+|+|.++.........++.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 45777899999999999999864 233 6899988665443344578899999999999999999999887 78899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+||+++|+|.+++..... .+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++||-
T Consensus 86 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kL~dfg 154 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKD---NIGSQYLLNWCVQIAKGMSYLEEK---RLVHRDLAARNVLVKTPQHVKITDFG 154 (279)
T ss_pred EEecCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CEEecccCcceEEEcCCCeEEECCCc
Confidence 9999999999999976432 388999999999999999999998 99999999999999999999999985
No 166
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.88 E-value=2.1e-22 Score=189.33 Aligned_cols=145 Identities=30% Similarity=0.450 Sum_probs=129.4
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..++|.+.+.||+|+||.||+|...+++.+|||.++... ....++.+|+.+++.++|+||+++++++......+++||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~--~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e 81 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGT--MSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTE 81 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCc--cCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEe
Confidence 456788889999999999999998778899999986532 234578999999999999999999999998889999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++..... ..+++..+..++.|++.|++|||+. +++|+||||+||++++++.++++||-
T Consensus 82 ~~~~~~L~~~i~~~~~--~~~~~~~~~~~~~~i~~al~~lh~~---~i~h~di~p~nili~~~~~~~l~d~g 148 (261)
T cd05034 82 YMSKGSLLDFLKSGEG--KKLRLPQLVDMAAQIAEGMAYLESR---NYIHRDLAARNILVGENLVCKIADFG 148 (261)
T ss_pred ccCCCCHHHHHhcccc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcchheEEEcCCCCEEECccc
Confidence 9999999999976432 2488999999999999999999999 99999999999999999999999984
No 167
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=99.88 E-value=1.5e-22 Score=192.52 Aligned_cols=149 Identities=26% Similarity=0.412 Sum_probs=128.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC-----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 366 (447)
..++|+..+.||+|+||.||+|...+ +..|++|.++..........+.+|+.++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 45678888999999999999998654 688999998754433344568899999999999999999998876 567
Q ss_pred eEEEeecCCCCChhhHhhccCCC----CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
.++++||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~---~i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKR---GVIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCHhhEEEcCCCcEEECC
Confidence 89999999999999999764322 13588999999999999999999998 999999999999999999999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 161 ~g 162 (280)
T cd05043 161 NA 162 (280)
T ss_pred CC
Confidence 85
No 168
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.88 E-value=2.1e-22 Score=189.33 Aligned_cols=144 Identities=28% Similarity=0.406 Sum_probs=126.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..++|+..+.||+|+||.||+|..++++.||+|.+.... ....++.+|+.+++.++|+||+++++++ ..+..+++||
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~~v~e 80 (260)
T cd05067 4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS--MSPEAFLAEANLMKQLQHPRLVRLYAVV-TQEPIYIITE 80 (260)
T ss_pred chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC--CcHHHHHHHHHHHHhcCCcCeeeEEEEE-ccCCcEEEEE
Confidence 346788889999999999999998888999999986543 2345789999999999999999999986 4567899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||.
T Consensus 81 ~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 147 (260)
T cd05067 81 YMENGSLVDFLKTPEG--IKLTINKLIDMAAQIAEGMAFIERK---NYIHRDLRAANILVSETLCCKIADFG 147 (260)
T ss_pred cCCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHHhEEEcCCCCEEEccCc
Confidence 9999999999875432 2478999999999999999999998 99999999999999999999999984
No 169
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.88 E-value=1.7e-22 Score=192.40 Aligned_cols=139 Identities=30% Similarity=0.459 Sum_probs=121.0
Q ss_pred CCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEE
Q 013258 298 SNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 370 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 370 (447)
+..+.||+|+||+||++.. .+++.||+|.++..........+.+|+++++.++||||+++++++... ...+++
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7789999999999988652 357889999987553333445788999999999999999999988653 357899
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||-
T Consensus 87 ~e~~~~~~l~~~~~~~-----~l~~~~~~~i~~~l~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 152 (283)
T cd05080 87 MEYVPLGSLRDYLPKH-----KLNLAQLLLFAQQICEGMAYLHSQ---HYIHRDLAARNVLLDNDRLVKIGDFG 152 (283)
T ss_pred ecCCCCCCHHHHHHHc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccccChheEEEcCCCcEEEeecc
Confidence 9999999999998753 289999999999999999999999 99999999999999999999999984
No 170
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.88 E-value=1.9e-22 Score=191.80 Aligned_cols=138 Identities=25% Similarity=0.356 Sum_probs=122.1
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|+||.||+|+. .+++.||+|.+..........++.+|++++.+++||||+++++++...+..++||||+
T Consensus 2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (279)
T cd06619 2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFM 81 (279)
T ss_pred cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecC
Confidence 577789999999999999985 4688999999865433333456889999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|..+. .+++.....++.|++.||+|||+. +|+|+||||+|||++.++.++++||-
T Consensus 82 ~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nill~~~~~~~l~dfg 140 (279)
T cd06619 82 DGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSL---KILHRDVKPSNMLVNTRGQVKLCDFG 140 (279)
T ss_pred CCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCCHHHEEECCCCCEEEeeCC
Confidence 999986542 267888899999999999999999 99999999999999999999999995
No 171
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.88 E-value=1.4e-22 Score=192.25 Aligned_cols=136 Identities=26% Similarity=0.346 Sum_probs=114.2
Q ss_pred ccccCCCceEEEEEeCC-------------------------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc
Q 013258 302 ILGRGGFGKVYKGRLAD-------------------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR 356 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~ 356 (447)
.||+|+||.||+|.... ...||+|.+..... .....+.+|+.+++.++||||++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~~~~~~~~l~h~niv~ 80 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHR-DIALAFFETASLMSQVSHIHLAF 80 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHH-HHHHHHHHHHHHHhcCCCCCeee
Confidence 58999999999997421 13588998864322 22346888999999999999999
Q ss_pred eeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 357 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 357 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
+++++.+....++||||+++|+|..++..... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++
T Consensus 81 ~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~iiH~dlkp~Nill~~~~ 154 (274)
T cd05076 81 VHGVCVRGSENIMVEEFVEHGPLDVCLRKEKG---RVPVAWKITVAQQLASALSYLEDK---NLVHGNVCAKNILLARLG 154 (274)
T ss_pred EEEEEEeCCceEEEEecCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHcC---CccCCCCCcccEEEeccC
Confidence 99999999999999999999999999875322 378999999999999999999998 999999999999998654
Q ss_pred c-------eeecccc
Q 013258 437 D-------QSSKTIL 444 (447)
Q Consensus 437 ~-------~~i~df~ 444 (447)
. .|++||-
T Consensus 155 ~~~~~~~~~kl~d~g 169 (274)
T cd05076 155 LAEGTSPFIKLSDPG 169 (274)
T ss_pred cccCccceeeecCCc
Confidence 3 6888874
No 172
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.88 E-value=1.3e-22 Score=198.33 Aligned_cols=144 Identities=25% Similarity=0.344 Sum_probs=127.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~l 369 (447)
.+.|+..+.||+|.||.||+++.+ +|+.+|+|.+++..... ....+.+|+.+|+.+. |||||.+++++.+.+..++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 456777899999999999999965 49999999997654332 2357899999999998 9999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC----Cceeeccccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED----ADQSSKTILR 445 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~~i~df~~ 445 (447)
|||++.||.|++.+... .+++..+..++.|++.++.|||+. +|+|||+||+|+|+... +..|++||.-
T Consensus 114 vmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~---gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGl 185 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSL---GVVHRDLKPENLLLASKDEGSGRIKLIDFGL 185 (382)
T ss_pred EEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhC---CceeccCCHHHeeeccccCCCCcEEEeeCCC
Confidence 99999999999999876 288999999999999999999998 99999999999999864 3689999964
No 173
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.88 E-value=2.7e-22 Score=188.95 Aligned_cols=143 Identities=27% Similarity=0.416 Sum_probs=124.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|.+.+.||+|+||.||+|+..++..||+|.++... ....++.+|+++++.++||||+++++++. .+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~--~~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYIVTEY 81 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc--cCHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEEEEEc
Confidence 34688889999999999999998776789999986532 23457899999999999999999999874 4568999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.++++.... ..+++..+..++.|++.||+|+|+. +|+||||||+||++++++.++++||-
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~Nill~~~~~~~L~dfg 147 (262)
T cd05071 82 MSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 147 (262)
T ss_pred CCCCcHHHHHhhccc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccccccCcccEEEcCCCcEEeccCC
Confidence 999999999976422 2478999999999999999999998 99999999999999999999999984
No 174
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.88 E-value=2.6e-23 Score=182.94 Aligned_cols=151 Identities=27% Similarity=0.336 Sum_probs=132.2
Q ss_pred HhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~ 366 (447)
..++|.+.+.+|+|||+.||.++ ..+++.||+|++.... .++....++|++..++++||||++++++... ..+
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~ 97 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-QEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHE 97 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-hHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCcee
Confidence 34578888999999999999998 6679999999996543 3445578999999999999999999988753 345
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
.|++++|...|+|.+.+.....+...+++.+.+.|+.++.+||++||+. .|+.+||||||.|||+.+++.+.+.||-.
T Consensus 98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~-~~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK-EPPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc-CCcccccCCCcceeEecCCCceEEEeccC
Confidence 8999999999999999988766666799999999999999999999998 55799999999999999999999999964
No 175
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.88 E-value=1.8e-22 Score=192.70 Aligned_cols=143 Identities=27% Similarity=0.360 Sum_probs=124.0
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||+|+||+||++... +++.||+|.+...... .....+.+|++++..++|+||+++.+++...+..+++|||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 556688999999999999864 6889999998643221 1233578899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||-
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~iiH~dikp~Nili~~~~~~kl~Dfg 147 (285)
T cd05632 82 MNGGDLKFHIYNMGN--PGFEEERALFYAAEILCGLEDLHRE---NTVYRDLKPENILLDDYGHIRISDLG 147 (285)
T ss_pred ccCccHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEECCCCCEEEecCC
Confidence 999999988865432 2489999999999999999999998 99999999999999999999999985
No 176
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.88 E-value=1.8e-22 Score=194.30 Aligned_cols=147 Identities=29% Similarity=0.380 Sum_probs=126.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 365 (447)
..++|...+.||+|+||.||++.. .++..||||.++..........+.+|+.+++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 345688889999999999999974 124589999987543333344689999999999 7999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..+++|||+++|+|.++++.... ..+++.+...++.|++.||+|||+. +|+|+||||+|||+++++.++++||.
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~--~~l~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~l~dfg 186 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRE--SFLTLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNVLLTHGKIVKICDFG 186 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeehhhhccceEEEcCCCeEEECCCc
Confidence 99999999999999999976432 2379999999999999999999998 99999999999999999999999984
No 177
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.88 E-value=3.9e-22 Score=188.69 Aligned_cols=141 Identities=29% Similarity=0.483 Sum_probs=120.7
Q ss_pred CccccCCCceEEEEEeCC-Cc--EEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLAD-GK--LVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||.||+|+..+ +. .+|+|.++..........+.+|++++.++ +||||+++++++...+..+++|||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 468999999999999653 43 56889886543333445788999999999 799999999999999999999999999
Q ss_pred CChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++..... ....+++.....++.|++.|++|||+. +++||||||+||++++++.+|++||-
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~---~i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccccceEEEcCCCeEEECCCC
Confidence 999999976431 122478999999999999999999998 99999999999999999999999985
No 178
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.88 E-value=3.1e-22 Score=189.26 Aligned_cols=144 Identities=28% Similarity=0.413 Sum_probs=118.7
Q ss_pred CCCCccccCCCceEEEEEeCC-Cc--EEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------Cce
Q 013258 298 SNKNILGRGGFGKVYKGRLAD-GK--LVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TEK 367 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~~-~~--~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 367 (447)
.+.+.||+|+||.||+|+..+ +. .+|+|.++..... .....+.+|+++++.++|+||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456889999999999999654 33 6899988654322 2234688999999999999999999987532 246
Q ss_pred EEEeecCCCCChhhHhhccC--CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+++|+|.+++.... .....+++.....++.|++.||+|||++ +|+||||||+|||+++++.+|++||-
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSK---SFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccchhheEEcCCCCEEECCCC
Confidence 89999999999998875422 1223478999999999999999999998 99999999999999999999999984
No 179
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.88 E-value=2e-22 Score=195.11 Aligned_cols=149 Identities=28% Similarity=0.438 Sum_probs=126.8
Q ss_pred hcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
.++|.+.+.||+|+||.||+++.. ....+|+|.++.........++..|++++..+ +||||+++++++...
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 356778899999999999999742 24579999987543333345688999999999 699999999999998
Q ss_pred CceEEEeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..+++|||+++|+|.+++..... ....++|.....++.|++.||+|||+. +|+||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~---gi~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESR---RCIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHC---CeeeccccceeEEE
Confidence 899999999999999999976421 123488999999999999999999998 99999999999999
Q ss_pred CCCCceeeccccc
Q 013258 433 DEDADQSSKTILR 445 (447)
Q Consensus 433 ~~~~~~~i~df~~ 445 (447)
++++.+|++||.-
T Consensus 168 ~~~~~~kL~Dfg~ 180 (314)
T cd05099 168 TEDNVMKIADFGL 180 (314)
T ss_pred cCCCcEEEccccc
Confidence 9999999999863
No 180
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.88 E-value=1.7e-22 Score=190.54 Aligned_cols=147 Identities=20% Similarity=0.304 Sum_probs=127.6
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+++. .+++.+|||.++..... ....++.+|+.+++.++||||+++++++...+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4577789999999999999995 47899999987543221 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.........+++.....++.|++.||+|||+. +++|+||||+||+++.++.++++||.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~dfg 151 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 151 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEECcch
Confidence 99999999999875333334588999999999999999999999 99999999999999999999999985
No 181
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.88 E-value=2.1e-22 Score=192.49 Aligned_cols=143 Identities=25% Similarity=0.466 Sum_probs=125.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|++|.||+|+.+ +++.||+|.+...........+.+|+++++.++|+||+++++++...+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 56888899999999999999965 58999999986543333334577899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+.+ +|.+++..... .+++.....++.|+++||.|||+. +|+||||||+||++++++.++++||.
T Consensus 85 ~~~-~L~~~~~~~~~---~~~~~~~~~~~~ql~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 148 (291)
T cd07844 85 LDT-DLKQYMDDCGG---GLSMHNVRLFLFQLLRGLAYCHQR---RVLHRDLKPQNLLISERGELKLADFG 148 (291)
T ss_pred CCC-CHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccCCHHHEEEcCCCCEEECccc
Confidence 984 99998876432 478899999999999999999998 99999999999999999999999985
No 182
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.88 E-value=2e-22 Score=196.78 Aligned_cols=148 Identities=29% Similarity=0.432 Sum_probs=126.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
..+|.+.+.||+|+||.||+++.. .+..||+|.++.........++.+|++++.++ +||||+++++++...
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 346788899999999999999742 12368999887543333445789999999999 799999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..++++||+++|+|.+++..... ....++|..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---givH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQ---KCIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHC---CeeccccccceEEE
Confidence 999999999999999999976421 123478899999999999999999998 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.+||+||-
T Consensus 168 ~~~~~~kL~Dfg 179 (334)
T cd05100 168 TEDNVMKIADFG 179 (334)
T ss_pred cCCCcEEECCcc
Confidence 999999999984
No 183
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.88 E-value=2e-22 Score=191.32 Aligned_cols=149 Identities=31% Similarity=0.400 Sum_probs=127.2
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
..++|++.+.||+|+||.||+|... .+..||+|.++..........|.+|+.+++.++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3467888899999999999999864 3568999988654433334568999999999999999999999999899
Q ss_pred eEEEeecCCCCChhhHhhccCCC---CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceee
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS---LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSS 440 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i 440 (447)
.++||||+++|+|.+++...... ...++|..+..++.|++.||+|||+. +++||||||+||++++++ .+|+
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEEN---HFIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchheEEEeccCCCcceEe
Confidence 99999999999999999765321 12488999999999999999999999 999999999999998765 5899
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||.
T Consensus 161 ~dfg 164 (277)
T cd05036 161 ADFG 164 (277)
T ss_pred ccCc
Confidence 9984
No 184
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.88 E-value=2.6e-22 Score=189.16 Aligned_cols=142 Identities=26% Similarity=0.458 Sum_probs=125.4
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
+|...+.||+|+||+||+|...+++.+|+|.++..... .....+.+|+++++.++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 46778999999999999999878999999988643221 1123588999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+|+||||+||++++++.++++||.
T Consensus 81 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 147 (265)
T cd06631 81 MEFVPGGSISSILNRFG----PLPEPVFCKYTKQILDGVAYLHNN---CVVHRDIKGNNVMLMPNGIIKLIDFG 147 (265)
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHhEEECCCCeEEeccch
Confidence 99999999999997643 378899999999999999999998 99999999999999999999999984
No 185
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.88 E-value=3.3e-22 Score=188.00 Aligned_cols=143 Identities=28% Similarity=0.443 Sum_probs=125.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|++.+.||+|+||.||+|...++..+|+|.++.... ....+.+|+.++++++|+|++++++++. ....+++|||
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~--~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~ 81 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM--SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEY 81 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC--CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEe
Confidence 356788899999999999999988888899999865432 3456899999999999999999999875 4568999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.++++.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~Nili~~~~~~~l~dfg 147 (260)
T cd05070 82 MSKGSLLDFLKDGEG--RALKLPNLVDMAAQVAAGMAYIERM---NYIHRDLRSANILVGDGLVCKIADFG 147 (260)
T ss_pred cCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEEeCCceEEeCCce
Confidence 999999999976422 2478999999999999999999998 99999999999999999999999985
No 186
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.88 E-value=1.9e-22 Score=196.56 Aligned_cols=135 Identities=24% Similarity=0.271 Sum_probs=115.1
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcC---CCCCccceeeEEecCCceEEEeecCCC
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA---VHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
||+|+||+||+|+.. +++.||||++...... .....+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999864 5899999998543211 1122455666666655 699999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.++|+||.
T Consensus 81 g~L~~~l~~~~----~~~~~~~~~~~~qil~al~~LH~~---~ivHrDlkp~Nili~~~~~~kl~Dfg 141 (330)
T cd05586 81 GELFWHLQKEG----RFSEDRAKFYIAELVLALEHLHKY---DIVYRDLKPENILLDATGHIALCDFG 141 (330)
T ss_pred ChHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeEECCCCCEEEecCC
Confidence 99999987643 388999999999999999999999 99999999999999999999999995
No 187
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.88 E-value=1.7e-22 Score=213.80 Aligned_cols=143 Identities=31% Similarity=0.399 Sum_probs=126.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+.. +++.||||+++..... .....+.+|+.++..++||||+++++++...+..++||
T Consensus 4 ~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 4 EEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 56888899999999999999965 5899999998653221 12346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+.+++|.+++.... .+++..+..|+.|++.||+|||.. +||||||||+|||++.++.+||+||-
T Consensus 84 Ey~~g~~L~~li~~~~----~l~~~~~~~i~~qil~aL~yLH~~---gIiHrDLKP~NILl~~~g~vkL~DFG 149 (669)
T cd05610 84 EYLIGGDVKSLLHIYG----YFDEEMAVKYISEVALALDYLHRH---GIIHRDLKPDNMLISNEGHIKLTDFG 149 (669)
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCccHHHEEEcCCCCEEEEeCC
Confidence 9999999999997643 378889999999999999999998 99999999999999999999999995
No 188
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.88 E-value=5.4e-23 Score=204.72 Aligned_cols=143 Identities=29% Similarity=0.426 Sum_probs=122.2
Q ss_pred CCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC------CceEEEe
Q 013258 299 NKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TEKLLVY 371 (447)
Q Consensus 299 ~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~~lv~ 371 (447)
..+.||+|+||.||+|+. .+|+.||||.++............+|+++|++++|+|||+++++-.+. +...+||
T Consensus 17 ~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvm 96 (732)
T KOG4250|consen 17 MDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVM 96 (732)
T ss_pred ehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEE
Confidence 347799999999999994 569999999998776666666799999999999999999999875543 3568999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC--CCC--ceeeccccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD--EDA--DQSSKTILR 445 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~--~~~i~df~~ 445 (447)
|||.+|||...|++... ...+++...+.+..++..||.|||++ +||||||||.||++- ++| --|++||..
T Consensus 97 EyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn---~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 97 EYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLREN---GIVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred eecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHc---CceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 99999999999987532 33589999999999999999999999 999999999999975 344 359999864
No 189
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=99.88 E-value=3.3e-22 Score=191.08 Aligned_cols=146 Identities=28% Similarity=0.461 Sum_probs=125.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|.+.+.||+|+||+||++... ++..+|+|.++... ......+.+|++++.+++||||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 83 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-HHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccE
Confidence 46788899999999999999742 34568999886432 223446899999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCC---------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 369 LVYPYMTNGSVASRLRERQS---------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~---------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
+||||+++++|.+++..... ....+++..+..++.|++.||+|||+. +++||||||+||++++++.++
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~---~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 84 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCcEE
Confidence 99999999999999975421 223489999999999999999999998 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
++||-
T Consensus 161 l~dfg 165 (288)
T cd05093 161 IGDFG 165 (288)
T ss_pred eccCC
Confidence 99985
No 190
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.88 E-value=1.9e-22 Score=202.65 Aligned_cols=139 Identities=30% Similarity=0.468 Sum_probs=124.9
Q ss_pred CCccccCCCceEEEEEe-CCC----cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 300 KNILGRGGFGKVYKGRL-ADG----KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~-~~~----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.++||+|+||+||+|.+ +.| .+||+|++..........++.+|+-+|.+++|||+++|+|+|.... ..||++||
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m 779 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM 779 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence 48899999999999974 433 4799999987766666778999999999999999999999998876 88999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
+.|.|.++++.++.. +--...+.+..|||+||.|||.+ ++|||||..+|||+.+-..+||.||.-
T Consensus 780 P~G~LlDyvr~hr~~---igsq~lLnw~~QIAkgM~YLe~q---rlVHrdLaaRNVLVksP~hvkitdfgl 844 (1177)
T KOG1025|consen 780 PLGCLLDYVREHRDN---IGSQDLLNWCYQIAKGMKYLEEQ---RLVHRDLAARNVLVKSPNHVKITDFGL 844 (1177)
T ss_pred ccchHHHHHHHhhcc---ccHHHHHHHHHHHHHHHHHHHhc---chhhhhhhhhheeecCCCeEEEEecch
Confidence 999999999987653 56678899999999999999999 999999999999999999999999974
No 191
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.88 E-value=3.1e-22 Score=187.68 Aligned_cols=136 Identities=26% Similarity=0.422 Sum_probs=117.3
Q ss_pred CccccCCCceEEEEEeCC-C----------cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 301 NILGRGGFGKVYKGRLAD-G----------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-~----------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+.||+|+||.||+|...+ + ..+++|.++..... ...+.+|+.+++.++||||+++++++.. ...++
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~--~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~l 77 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD--SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIM 77 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh--HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEE
Confidence 468999999999999754 3 25788877544322 5678999999999999999999999988 77899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-------ceeecc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-------DQSSKT 442 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-------~~~i~d 442 (447)
||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++ .++++|
T Consensus 78 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dlkp~Nill~~~~~~~~~~~~~kl~D 151 (259)
T cd05037 78 VEEYVKFGPLDVFLHREKN---NVSLHWKLDVAKQLASALHYLEDK---KLVHGNVCGKNILVARYGLNEGYVPFIKLSD 151 (259)
T ss_pred EEEcCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhhC---CeecccCccceEEEecCccccCCceeEEeCC
Confidence 9999999999999986532 488999999999999999999998 999999999999999888 789999
Q ss_pred ccc
Q 013258 443 ILR 445 (447)
Q Consensus 443 f~~ 445 (447)
|.-
T Consensus 152 fg~ 154 (259)
T cd05037 152 PGI 154 (259)
T ss_pred CCc
Confidence 863
No 192
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.88 E-value=2.3e-22 Score=191.33 Aligned_cols=147 Identities=24% Similarity=0.331 Sum_probs=123.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHH-HhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+++.. +|+.||+|+++.........++..|+.. ++..+||||+++++++...+..+++||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888899999999999999965 5899999998654333334456666665 566789999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++ |+|.+++.........+++..+..++.|++.||+|||+++ +++||||||+||++++++.+||+||-
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~--~i~h~dlkp~nil~~~~~~~kl~dfg 149 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKL--SVIHRDVKPSNVLINRNGQVKLCDFG 149 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecc
Confidence 996 6888888764333346899999999999999999999852 79999999999999999999999984
No 193
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.88 E-value=2.7e-22 Score=191.41 Aligned_cols=143 Identities=27% Similarity=0.371 Sum_probs=124.0
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||+|+||.||++... +++.||||.+....... ....+..|+.++..++|+||+++++.+...+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 566788999999999999864 68999999986433222 123577899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++..... ..+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||-
T Consensus 82 ~~g~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~---~iiH~dikp~Nil~~~~~~~~l~Dfg 147 (285)
T cd05630 82 MNGGDLKFHIYHMGE--AGFEEGRAVFYAAEICCGLEDLHQE---RIVYRDLKPENILLDDHGHIRISDLG 147 (285)
T ss_pred cCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHEEECCCCCEEEeecc
Confidence 999999998865422 2488899999999999999999998 99999999999999999999999985
No 194
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.88 E-value=1.7e-22 Score=192.35 Aligned_cols=146 Identities=25% Similarity=0.372 Sum_probs=123.7
Q ss_pred CCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+|...+.||+|+||.||+|+.. +++.||+|.++..........+.+|+.++..++||||+++++++...+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3555688999999999999853 2478999999754332233468899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccC------------CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 370 VYPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
++||+.+++|.+++.... .....+++..+..++.|++.||+|+|+. +|+||||||+||++++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~---gi~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSH---HVVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHc---CccccccchhheEecCCCc
Confidence 999999999999985321 1123478888999999999999999998 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+|++||.
T Consensus 163 ~kl~Dfg 169 (283)
T cd05091 163 VKISDLG 169 (283)
T ss_pred eEecccc
Confidence 9999996
No 195
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.88 E-value=4.3e-22 Score=186.58 Aligned_cols=144 Identities=17% Similarity=0.296 Sum_probs=126.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|+||.||+++.. +++.+|+|.++..........+.+|+.+++.++|+||+++++++...+..+++|||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4677899999999999999864 588999999864433334456889999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++..... ..+++.....++.|++.||.|||+. +|+|+||||+||++++++.++++||.
T Consensus 81 ~~~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~al~~lH~~---~i~H~dl~p~nili~~~~~~~l~dfg 145 (255)
T cd08219 81 DGGDLMQKIKLQRG--KLFPEDTILQWFVQMCLGVQHIHEK---RVLHRDIKSKNIFLTQNGKVKLGDFG 145 (255)
T ss_pred CCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEECCCCcEEEcccC
Confidence 99999998865322 2478888999999999999999999 99999999999999999999999985
No 196
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.88 E-value=6e-22 Score=187.30 Aligned_cols=146 Identities=29% Similarity=0.414 Sum_probs=122.3
Q ss_pred CCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCc-----
Q 013258 297 FSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE----- 366 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~----- 366 (447)
|++.+.||+|+||.||+|.... +..||+|.++...... ....+.+|++.++.++||||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998642 3679999987543222 23468999999999999999999998876554
Q ss_pred -eEEEeecCCCCChhhHhhccCC--CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 367 -KLLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 367 -~~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
.++++||+++|+|.+++..... ....+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNR---NFIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchheEEECCCCeEEECCc
Confidence 7899999999999999865321 123588999999999999999999998 9999999999999999999999998
Q ss_pred cc
Q 013258 444 LR 445 (447)
Q Consensus 444 ~~ 445 (447)
-.
T Consensus 158 g~ 159 (273)
T cd05035 158 GL 159 (273)
T ss_pred cc
Confidence 53
No 197
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.88 E-value=1.9e-22 Score=192.22 Aligned_cols=154 Identities=26% Similarity=0.341 Sum_probs=129.0
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEe-
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCT- 362 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~- 362 (447)
.++.+....++|++.+.||+|+||.||+++.. +++.+|+|.++... ....++.+|+.++..+ +||||+++++++.
T Consensus 9 ~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 9 IFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH--DIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc--chHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 34455567788999999999999999999864 58899999875432 2234688899999998 6999999999874
Q ss_pred ----cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 363 ----TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 363 ----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
..+..++||||+++++|.+++.........+++..+..++.|+++||.|||+. +|+||||||+||++++++.+
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~ 163 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVN---KTIHRDVKGNNILLTTEGGV 163 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhC---CccccCCCHHhEEECCCCCE
Confidence 34568999999999999998865332233578899999999999999999998 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
+++||-
T Consensus 164 kl~dfg 169 (286)
T cd06638 164 KLVDFG 169 (286)
T ss_pred EEccCC
Confidence 999984
No 198
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=3.8e-22 Score=196.60 Aligned_cols=139 Identities=24% Similarity=0.327 Sum_probs=122.0
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
....+|.+.+.||+|+||.||+|+.. +++.||+|..... ....|+.++++++||||+++++++......++|
T Consensus 63 ~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~-------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 135 (357)
T PHA03209 63 VASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG-------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMV 135 (357)
T ss_pred hhhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc-------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEE
Confidence 34567999999999999999999965 4788999975322 235689999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||+. ++|.+++.... ..++|..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 136 ~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 202 (357)
T PHA03209 136 LPHYS-SDLYTYLTKRS---RPLPIDQALIIEKQILEGLRYLHAQ---RIIHRDVKTENIFINDVDQVCIGDLG 202 (357)
T ss_pred EEccC-CcHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEecCc
Confidence 99995 68888886543 2489999999999999999999999 99999999999999999999999995
No 199
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.88 E-value=2.4e-22 Score=191.59 Aligned_cols=147 Identities=25% Similarity=0.364 Sum_probs=127.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||++... +++.||+|.++.........++.+|+.++.+++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 35778899999999999999975 68999999886543333345788999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... ....+++..+..++.|+++||.|||+.+ +|+||||||+||++++++.++++||.
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~dfg 148 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEH--NIIHRDVKPTNVLVNGNGQVKLCDFG 148 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcC--CEeeCCCCHHHEEECCCCCEEEeecC
Confidence 99999999887632 1234899999999999999999999632 89999999999999999999999985
No 200
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.88 E-value=2.1e-23 Score=216.25 Aligned_cols=153 Identities=24% Similarity=0.296 Sum_probs=135.4
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCT 362 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 362 (447)
...+++...++|.+.++||+|+||+|..++++ +++.||+|++.+... .....-|.+|-.+|...+.+-|++++-.|+
T Consensus 66 ~v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQ 145 (1317)
T KOG0612|consen 66 KVKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQ 145 (1317)
T ss_pred HHHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhc
Confidence 34566777789999999999999999999965 589999999976432 223345899999999999999999999999
Q ss_pred cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 363 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 363 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
+..++|+|||||+||+|..++.... .+++..+..++..|..||.-+|+. |.|||||||+|||||.+|.+|++|
T Consensus 146 D~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~m---gyVHRDiKPDNvLld~~GHikLAD 218 (1317)
T KOG0612|consen 146 DERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSM---GYVHRDIKPDNVLLDKSGHIKLAD 218 (1317)
T ss_pred CccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhc---cceeccCCcceeEecccCcEeecc
Confidence 9999999999999999999998764 388999999999999999999999 999999999999999999999999
Q ss_pred ccc
Q 013258 443 ILR 445 (447)
Q Consensus 443 f~~ 445 (447)
|..
T Consensus 219 FGs 221 (1317)
T KOG0612|consen 219 FGS 221 (1317)
T ss_pred chh
Confidence 963
No 201
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.88 E-value=3.1e-22 Score=191.39 Aligned_cols=144 Identities=25% Similarity=0.380 Sum_probs=124.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+++|...+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++|+||+++++++...+..++|+|
T Consensus 4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e 83 (291)
T cd07870 4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVFE 83 (291)
T ss_pred cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEEe
Confidence 467888999999999999999864 5889999998654433334467899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+. +++.+.+.... ..+.+..+..++.|++.||+|||+. +|+||||||+||+++.+++++++||.
T Consensus 84 ~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 148 (291)
T cd07870 84 YMH-TDLAQYMIQHP---GGLHPYNVRLFMFQLLRGLAYIHGQ---HILHRDLKPQNLLISYLGELKLADFG 148 (291)
T ss_pred ccc-CCHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEEcCCCcEEEeccc
Confidence 995 67877765432 2367888899999999999999999 99999999999999999999999985
No 202
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.88 E-value=5.2e-22 Score=186.71 Aligned_cols=143 Identities=27% Similarity=0.433 Sum_probs=125.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc----cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|++|.||+|... +++.||+|.++...... ....+.+|++++++++||||+++++++...+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 46888999999999999999854 58999999986432211 12358899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++++|.+.+.... .+++.....++.|++.||.|||+. +|+||||||+||++++++.++++||.
T Consensus 82 v~e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nilv~~~~~~~l~dfg 149 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG----ALTETVTRKYTRQILEGVEYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 149 (263)
T ss_pred EEEECCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 999999999999987643 378888999999999999999999 99999999999999999999999985
No 203
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.88 E-value=6.7e-22 Score=185.93 Aligned_cols=142 Identities=28% Similarity=0.405 Sum_probs=123.5
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|.+.+.||+|+||.||+|...++..+|+|.+.... .....+.+|+++++.++|+|++++++++. .+..+++|||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT--MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFM 82 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC--ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcC
Confidence 4577788999999999999998777789999886432 23456889999999999999999998875 45689999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.++++.... ..++|..+..++.|++.||+|||+. +++||||||+||++++++.++++||.
T Consensus 83 ~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~dl~~~Nill~~~~~~~l~dfg 147 (260)
T cd05069 83 GKGSLLDFLKEGDG--KYLKLPQLVDMAAQIADGMAYIERM---NYIHRDLRAANILVGDNLVCKIADFG 147 (260)
T ss_pred CCCCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccCcceEEEcCCCeEEECCCc
Confidence 99999999976422 2478999999999999999999998 99999999999999999999999985
No 204
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.88 E-value=5.5e-22 Score=185.68 Aligned_cols=144 Identities=24% Similarity=0.357 Sum_probs=126.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|++|.||+|... +++.|++|.+.... .......+.+|+++++.++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4677789999999999999864 58999999986432 223345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.++++.... ..+++.....++.|++.||.|||+. +++||||||+||++++++.++++||-
T Consensus 81 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~~l~~al~~lH~~---~i~h~dl~~~nili~~~~~~~l~df~ 146 (256)
T cd08529 81 AENGDLHKLLKMQRG--RPLPEDQVWRFFIQILLGLAHLHSK---KILHRDIKSLNLFLDAYDNVKIGDLG 146 (256)
T ss_pred CCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEeCCCCEEEcccc
Confidence 999999999986422 3488899999999999999999998 99999999999999999999999984
No 205
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.88 E-value=4.6e-23 Score=201.35 Aligned_cols=145 Identities=28% Similarity=0.402 Sum_probs=128.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
...+.....+||-|-||+||.|.|+. .-.||||.++++.. ...+|+.|+.+|+.++|||+|+|+|+|......|+|+
T Consensus 265 eRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM--eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiT 342 (1157)
T KOG4278|consen 265 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM--EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIIT 342 (1157)
T ss_pred cchheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch--hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEE
Confidence 33455667899999999999999865 67899999987643 3457999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||.+|+|.++|+++.... ++--..++++.||+.||+||..+ ++|||||.++|+|+.++-.+||+||-
T Consensus 343 EfM~yGNLLdYLRecnr~e--v~avvLlyMAtQIsSaMeYLEkk---nFIHRDLAARNCLVgEnhiVKvADFG 410 (1157)
T KOG4278|consen 343 EFMCYGNLLDYLRECNRSE--VPAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHIVKVADFG 410 (1157)
T ss_pred ecccCccHHHHHHHhchhh--cchhHHHHHHHHHHHHHHHHHHh---hhhhhhhhhhhccccccceEEeeccc
Confidence 9999999999999975432 55566789999999999999999 99999999999999999999999994
No 206
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.88 E-value=1.3e-22 Score=190.39 Aligned_cols=142 Identities=32% Similarity=0.472 Sum_probs=123.2
Q ss_pred CCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccH-HHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGE-LQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~-~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|+..+.||+|+||+||+++... ++.||+|.+......... ....+|+.++..++||||+++++++......+++|||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 3456889999999999999654 678999999655332222 23456999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++++++++++||-.
T Consensus 81 ~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~L~~Lh~~---~i~H~dikp~NIl~~~~~~~~l~Dfg~ 144 (260)
T PF00069_consen 81 PGGSLQDYLQKNK----PLSEEEILKIAYQILEALAYLHSK---GIVHRDIKPENILLDENGEVKLIDFGS 144 (260)
T ss_dssp TTEBHHHHHHHHS----SBBHHHHHHHHHHHHHHHHHHHHT---TEEESSBSGGGEEESTTSEEEESSGTT
T ss_pred ccccccccccccc----cccccccccccccccccccccccc---ccccccccccccccccccccccccccc
Confidence 9999999998332 389999999999999999999999 999999999999999999999999863
No 207
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.88 E-value=7.5e-22 Score=185.00 Aligned_cols=141 Identities=34% Similarity=0.531 Sum_probs=124.7
Q ss_pred CccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||.||+|.... +..||+|.++..........+.+|++.+..++|+||+++++++......+++|||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999998643 7899999997654433356789999999999999999999999999999999999999
Q ss_pred CChhhHhhccCCC-----CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSS-----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~-----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|.+++...... ...+++..+..++.|+++||+|||++ +++||||||+||++++++.++++||-
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~---~i~H~di~p~nili~~~~~~~l~dfg 150 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASK---KFVHRDLAARNCLVGEDLVVKISDFG 150 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcC---CcccCccCcceEEECCCCcEEEcccc
Confidence 9999999875211 24589999999999999999999998 99999999999999999999999984
No 208
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.88 E-value=3.8e-22 Score=190.83 Aligned_cols=143 Identities=30% Similarity=0.399 Sum_probs=126.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+++.. +++.+|+|.++.... ......+.+|++++++++||||+++++++...+..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 36778899999999999999865 589999999864321 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.+|++||-
T Consensus 81 e~~~~~~L~~~~~~~~----~l~~~~~~~~~~qil~~l~~lH~~---~i~H~dl~p~nili~~~~~~kl~dfg 146 (290)
T cd05580 81 EYVPGGELFSHLRKSG----RFPEPVARFYAAQVVLALEYLHSL---DIVYRDLKPENLLLDSDGYIKITDFG 146 (290)
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEeeCC
Confidence 9999999999987653 388899999999999999999998 99999999999999999999999985
No 209
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.88 E-value=3.3e-22 Score=201.96 Aligned_cols=136 Identities=24% Similarity=0.271 Sum_probs=120.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|.+.+.||+|+||.||+|+.. +++.||||.... ..+.+|++++++++|+|||++++++...+..++||||
T Consensus 169 ~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 169 LGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred CCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 46888899999999999999965 488999995421 2367899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. ++|.+++..... .++|..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 242 ~~-~~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDLKP~NILl~~~~~vkL~DFG 305 (461)
T PHA03211 242 YR-SDLYTYLGARLR---PLGLAQVTAVARQLLSAIDYIHGE---GIIHRDIKTENVLVNGPEDICLGDFG 305 (461)
T ss_pred cC-CCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEEECcCCHHHEEECCCCCEEEcccC
Confidence 95 789888865422 489999999999999999999999 99999999999999999999999995
No 210
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.87 E-value=6.8e-22 Score=188.32 Aligned_cols=143 Identities=23% Similarity=0.359 Sum_probs=124.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+|+.+ +++.||+|++..... ......+.+|+.+++.++|||++++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46788899999999999999975 589999999864332 2223457899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++++.|..++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~ql~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 145 (286)
T cd07847 81 YCDHTVLNELEKNPR----GVPEHLIKKIIWQTLQAVNFCHKH---NCIHRDVKPENILITKQGQIKLCDFG 145 (286)
T ss_pred ccCccHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCChhhEEEcCCCcEEECccc
Confidence 999988887765432 388999999999999999999998 99999999999999999999999984
No 211
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=3.5e-22 Score=190.47 Aligned_cols=144 Identities=24% Similarity=0.331 Sum_probs=126.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||+||++... +++.||+|.+...........+.+|++++..++||||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 45667789999999999999854 58899999886543333455789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++...+ .+++.....++.+++.||.|||+.. +++||||||+||++++++.++++||-
T Consensus 85 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~~--~i~H~dl~p~nil~~~~~~~~l~d~g 149 (284)
T cd06620 85 MDCGSLDRIYKKGG----PIPVEILGKIAVAVVEGLTYLYNVH--RIMHRDIKPSNILVNSRGQIKLCDFG 149 (284)
T ss_pred CCCCCHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHhc--CeeccCCCHHHEEECCCCcEEEccCC
Confidence 99999999887643 3889999999999999999999732 79999999999999999999999984
No 212
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.87 E-value=5.7e-22 Score=191.06 Aligned_cols=143 Identities=21% Similarity=0.325 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+++.. +++.||+|.+..... ......+.+|+++++.++||||+++++.+...+..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888899999999999999965 478999999865432 122346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|+++||+|||+. +++||||||+||++++++.++++||.
T Consensus 81 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~NIll~~~~~~~l~dfg 146 (305)
T cd05609 81 EYVEGGDCATLLKNIG----ALPVDMARMYFAETVLALEYLHNY---GIVHRDLKPDNLLITSMGHIKLTDFG 146 (305)
T ss_pred ecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHEEECCCCCEEEeeCC
Confidence 9999999999997643 378999999999999999999998 99999999999999999999999985
No 213
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.87 E-value=6.6e-23 Score=198.63 Aligned_cols=130 Identities=31% Similarity=0.474 Sum_probs=117.0
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
++-||.|+-|.||+|++. ++.||||+++.. -+.+|+.|++++|||||.+.|+|......++|||||+.|-|
T Consensus 129 LeWlGSGaQGAVF~Grl~-netVAVKKV~el--------kETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 129 LEWLGSGAQGAVFLGRLH-NETVAVKKVREL--------KETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhccCcccceeeeecc-CceehhHHHhhh--------hhhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 466999999999999985 688999988542 24678899999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
++.|+..+. +.......+..+||.||.|||.+ .|||||||+-||||..+..+||+||--
T Consensus 200 ~~VLka~~~----itp~llv~Wsk~IA~GM~YLH~h---KIIHRDLKSPNiLIs~~d~VKIsDFGT 258 (904)
T KOG4721|consen 200 YEVLKAGRP----ITPSLLVDWSKGIAGGMNYLHLH---KIIHRDLKSPNILISYDDVVKISDFGT 258 (904)
T ss_pred HHHHhccCc----cCHHHHHHHHHHhhhhhHHHHHh---hHhhhccCCCceEeeccceEEeccccc
Confidence 999987643 66677889999999999999999 999999999999999999999999953
No 214
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.87 E-value=6.4e-22 Score=188.19 Aligned_cols=144 Identities=26% Similarity=0.416 Sum_probs=125.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 367 (447)
++|+..+.||+|+||.||++++. +++.+|||.++..........+.+|+++++.++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35667789999999999999853 3678999998754332234579999999999999999999999877 5578
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|||+++++|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~---~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 154 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRD---QINLKRLLLFSSQICKGMDYLGSQ---RYIHRDLAARNILVESEDLVKISDFG 154 (284)
T ss_pred EEEEecCCCCCHHHHHHhCcc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 999999999999999976532 389999999999999999999998 99999999999999999999999984
No 215
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.87 E-value=7.8e-22 Score=184.85 Aligned_cols=144 Identities=22% Similarity=0.316 Sum_probs=126.4
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||.++. .+++.+++|.+.... ......++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 477889999999999999885 458899999885432 223345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++.... ...+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++||-
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~ni~~~~~~~~kl~d~~ 146 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKA---GILHRDIKTLNIFLTKAGLIKLGDFG 146 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChHhEEEeCCCCEEECcCc
Confidence 99999999997642 23478999999999999999999998 99999999999999999999999984
No 216
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.87 E-value=6e-22 Score=186.26 Aligned_cols=143 Identities=23% Similarity=0.370 Sum_probs=125.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||++...++..+|+|.++... .....+.+|+++++.++|+||+++++++.. ...+++|||
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh--hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 46788889999999999999997777889999886432 233468999999999999999999999877 778999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||-
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~aL~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~ 147 (260)
T cd05073 82 MAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 147 (260)
T ss_pred CCCCcHHHHHHhCCc--cccCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCCc
Confidence 999999999976432 3478899999999999999999998 99999999999999999999999984
No 217
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.87 E-value=4.9e-22 Score=187.66 Aligned_cols=149 Identities=23% Similarity=0.316 Sum_probs=125.9
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+.+++++.....||+|+||.||+|+.. ++..||+|.+..... .....+.+|+++++.++|+||+++++++...+..++
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~-~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 82 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDS-RYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKI 82 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCH-HHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEE
Confidence 445666766788999999999999854 578899998864432 234468999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
++||+++++|.++++..... ...++..+..++.|++.||+|||+. +|+||||||+||+++. ++.++++||.
T Consensus 83 v~e~~~~~~L~~~l~~~~~~-~~~~~~~~~~~~~qi~~al~~lH~~---~i~h~dl~p~nil~~~~~~~~~l~dfg 154 (268)
T cd06624 83 FMEQVPGGSLSALLRSKWGP-LKDNEQTIIFYTKQILEGLKYLHDN---QIVHRDIKGDNVLVNTYSGVVKISDFG 154 (268)
T ss_pred EEecCCCCCHHHHHHHhccc-CCCcHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCeEEEecch
Confidence 99999999999999764221 1127788889999999999999998 9999999999999987 6789999985
No 218
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.87 E-value=7.4e-22 Score=188.03 Aligned_cols=144 Identities=21% Similarity=0.361 Sum_probs=124.6
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|++|.||+|+.. +++.||+|.++...... ....+.+|+.++..++||||+++++++..++..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4677889999999999999965 68999999986443222 234688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++ ++|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+||++++++.++|+||.
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 146 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSR---RVLHRDLKPQNLLIDNKGVIKLADFG 146 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCCHHHEEEcCCCcEEECccc
Confidence 97 688888865332 23588999999999999999999998 99999999999999999999999985
No 219
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.87 E-value=9.8e-22 Score=184.12 Aligned_cols=142 Identities=27% Similarity=0.430 Sum_probs=125.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
+|+..+.||+|+||+||+|... +++.|++|.+..... ......+.+|+++++.++|+||+++++++......+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 3667789999999999999965 689999998854321 12334689999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||+++++|.+++.... .+++.....++.|++.||+|||+. +|+|+||||+||++++++.+||+||-
T Consensus 81 ~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~~~ni~~~~~~~~kl~d~~ 147 (258)
T cd06632 81 LELVPGGSLAKLLKKYG----SFPEPVIRLYTRQILLGLEYLHDR---NTVHRDIKGANILVDTNGVVKLADFG 147 (258)
T ss_pred EEecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCc
Confidence 99999999999997643 378999999999999999999998 99999999999999999999999984
No 220
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.87 E-value=4.2e-22 Score=189.38 Aligned_cols=144 Identities=31% Similarity=0.430 Sum_probs=127.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||++... ++..+|+|.++... ......+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIE 82 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEee
Confidence 356788899999999999999964 58899999986432 2233468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++..+++||-
T Consensus 83 ~~~~~~L~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~nili~~~~~~~l~d~g 148 (280)
T cd06611 83 FCDGGALDSIMLELER---GLTEPQIRYVCRQMLEALNFLHSH---KVIHRDLKAGNILLTLDGDVKLADFG 148 (280)
T ss_pred ccCCCcHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEECCCCCEEEccCc
Confidence 9999999999876432 488999999999999999999999 99999999999999999999999984
No 221
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.87 E-value=4e-24 Score=187.53 Aligned_cols=146 Identities=23% Similarity=0.308 Sum_probs=125.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++.|++.+.||+|.|+.||++.. ++|+.+|+|++.... ...+..++.+|+++.+.++||||++|.+.+.+....++|
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 345677778999999999999974 579999999885332 223456799999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeeccccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTILR 445 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~~ 445 (447)
+|+|.||+|..-+-.+. ..++..+-.++.||+++|.|+|.+ +|||||+||+|+|+.+.. -+|++||-.
T Consensus 89 Fe~m~G~dl~~eIV~R~----~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGv 159 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVARE----FYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGL 159 (355)
T ss_pred EecccchHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccce
Confidence 99999999988876652 367888999999999999999999 999999999999997533 579999964
No 222
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.87 E-value=3.6e-22 Score=201.89 Aligned_cols=142 Identities=23% Similarity=0.323 Sum_probs=117.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-------- 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 364 (447)
..+|+..+.||+|+||.||+|+.. +++.||||.+.... ....+|+.+++.++||||+++++++...
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~-----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP-----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc-----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 457888999999999999999864 58899999885321 2345799999999999999999876432
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeeccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 443 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df 443 (447)
...++||||+++ ++.+++.........+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .+||+||
T Consensus 140 ~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~---~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSK---FICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCcCHHHEEEcCCCCceeeecc
Confidence 235689999975 77777764333334588999999999999999999999 999999999999999765 6999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 216 G 216 (440)
T PTZ00036 216 G 216 (440)
T ss_pred c
Confidence 5
No 223
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.87 E-value=9.2e-22 Score=185.37 Aligned_cols=137 Identities=26% Similarity=0.380 Sum_probs=115.6
Q ss_pred CccccCCCceEEEEEeCC-------------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 301 NILGRGGFGKVYKGRLAD-------------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
+.||+|+||.||+|...+ ...|++|.+.... ......+.+|+.++..++||||+++++++......
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~-~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~ 79 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSH-RDISLAFFETASMMRQVSHKHIVLLYGVCVRDVEN 79 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhh-hhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCC
Confidence 468999999999998532 2258889875432 22334688899999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc-------eee
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-------QSS 440 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-------~~i 440 (447)
+++|||+++|+|..++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +++
T Consensus 80 ~lv~e~~~~~~l~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nill~~~~~~~~~~~~~~l 153 (262)
T cd05077 80 IMVEEFVEFGPLDLFMHRKS---DVLTTPWKFKVAKQLASALSYLEDK---DLVHGNVCTKNILLAREGIDGECGPFIKL 153 (262)
T ss_pred EEEEecccCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHhhhC---CeECCCCCcccEEEecCCccCCCCceeEe
Confidence 99999999999998886543 2388999999999999999999998 9999999999999987764 788
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||.
T Consensus 154 ~d~g 157 (262)
T cd05077 154 SDPG 157 (262)
T ss_pred CCCC
Confidence 8875
No 224
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.87 E-value=1.1e-21 Score=184.03 Aligned_cols=141 Identities=28% Similarity=0.442 Sum_probs=123.2
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe-cCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT-TVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~-~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||++... +..||+|.++... ....+.+|+.++++++|+|++++++++. ..+..++++||
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~---~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc---hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 46788899999999999999874 7889999886432 3456899999999999999999999765 45678999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.++++.... ..+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|++||-
T Consensus 82 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nil~~~~~~~kl~dfg 147 (256)
T cd05082 82 MAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEAN---NFVHRDLAARNVLVSEDNVAKVSDFG 147 (256)
T ss_pred CCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEeccccchheEEEcCCCcEEecCCc
Confidence 999999999976432 2478999999999999999999998 99999999999999999999999984
No 225
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.87 E-value=7.2e-22 Score=189.63 Aligned_cols=141 Identities=23% Similarity=0.353 Sum_probs=126.0
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|+..+.||+|+||.||+++. .+++.||+|.+..... .....+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 19 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 19 KKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 5688889999999999999995 4689999999864332 2334688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.+. .+++..+..++.|++.||.|||+. +|+||||||+|||+++++.++++||-
T Consensus 98 ~~~~~L~~~~~~~-----~~~~~~~~~~~~~l~~~L~~LH~~---~i~H~dL~p~Nili~~~~~~~l~Dfg 160 (297)
T cd06656 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALDFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 160 (297)
T ss_pred cCCCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEECcCc
Confidence 9999999998653 278889999999999999999998 99999999999999999999999994
No 226
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.87 E-value=7.4e-22 Score=186.10 Aligned_cols=143 Identities=27% Similarity=0.419 Sum_probs=122.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc----ccHHHHHHHHHHHhcCCCCCccceeeEEecC--Cce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS----GGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 367 (447)
.+|+..+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 46788899999999999999864 5899999988533211 1123688899999999999999999988764 457
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|||+++++|.+++.... .+++.....++.|++.||+|||+. +|+|+||||+||++++++.++++||.
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~l~Dfg 151 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYG----ALTENVTRKYTRQILEGVSYLHSN---MIVHRDIKGANILRDSVGNVKLGDFG 151 (265)
T ss_pred EEEEEecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEecCCCCEEECcCc
Confidence 89999999999999987543 278888999999999999999999 99999999999999999999999995
No 227
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.87 E-value=1e-21 Score=183.55 Aligned_cols=138 Identities=29% Similarity=0.466 Sum_probs=123.1
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChh
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 380 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 380 (447)
++||+|+||.||++...+++.||+|.++..........+.+|+++++.++|+||+++++++......++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999976699999999865443334457899999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 381 SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 381 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++..... .+++.....++.+++.||+|||++ +++||||||+||++++++.++++||.
T Consensus 81 ~~l~~~~~---~~~~~~~~~~~~~~~~~l~~lH~~---~i~h~di~p~nili~~~~~~~l~d~g 138 (251)
T cd05041 81 TFLRKKKN---RLTVKKLLQMSLDAAAGMEYLESK---NCIHRDLAARNCLVGENNVLKISDFG 138 (251)
T ss_pred HHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CEehhhcCcceEEEcCCCcEEEeecc
Confidence 99876432 378889999999999999999999 99999999999999999999999985
No 228
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.87 E-value=8.1e-22 Score=189.15 Aligned_cols=142 Identities=27% Similarity=0.436 Sum_probs=124.7
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
+|+..+.||+|+||.||+|... +++.||||.++..... .....+..|+++++.++|+||+++++++...+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 3677789999999999999964 5899999999654322 1233577899999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+ +|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+||++++++.++|+||-
T Consensus 81 ~e~~-~~~L~~~i~~~~---~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nill~~~~~~~l~dfg 147 (298)
T cd07841 81 FEFM-ETDLEKVIKDKS---IVLTPADIKSYMLMTLRGLEYLHSN---WILHRDLKPNNLLIASDGVLKLADFG 147 (298)
T ss_pred Eccc-CCCHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecCCChhhEEEcCCCCEEEccce
Confidence 9999 899999997643 2489999999999999999999999 99999999999999999999999985
No 229
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.87 E-value=1.4e-22 Score=195.91 Aligned_cols=146 Identities=24% Similarity=0.349 Sum_probs=128.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecCCc-eEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTVTE-KLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-~~lv~ 371 (447)
++|...+++|+|+||.++..+.+ +++.+++|.+........ +.....|+.++++++|||||.+.+.+..++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 56788899999999999988854 578999999975543333 3368899999999999999999999998888 99999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
+|++||++.+.+.+.+. ..+++.....++.|++.|+.|||++ +|+|||||+.||+++.+..+|++||.-
T Consensus 84 ~Y~eGg~l~~~i~~~k~--~~f~E~~i~~~~~Q~~~av~ylH~~---~iLHRDlK~~Nifltk~~~VkLgDfGl 152 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQKG--VLFPEERILKWFVQILLAVNYLHEN---RVLHRDLKCANIFLTKDKKVKLGDFGL 152 (426)
T ss_pred eecCCCCHHHHHHHHhh--ccccHHHHHHHHHHHHHHHHHHHhh---hhhcccchhhhhhccccCceeecchhh
Confidence 99999999999988653 3478889999999999999999988 999999999999999999999999963
No 230
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.87 E-value=5.5e-22 Score=194.42 Aligned_cols=143 Identities=24% Similarity=0.334 Sum_probs=121.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 364 (447)
..++|+..+.||+|+||.||+|.. .+++.||||.++..... .....+.+|+++++.++||||+++++++...
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07878 13 VPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENF 92 (343)
T ss_pred hhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccccc
Confidence 457899999999999999999985 46889999998643221 2234577899999999999999999887542
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++++|++ +++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 93 ~~~~~~~~~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrdikp~Nil~~~~~~~kl~Dfg 163 (343)
T cd07878 93 NEVYLVTNLM-GADLNNIVKCQ-----KLSDEHVQFLIYQLLRGLKYIHSA---GIIHRDLKPSNVAVNEDCELRILDFG 163 (343)
T ss_pred CcEEEEeecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCChhhEEECCCCCEEEcCCc
Confidence 4568999988 78998877542 388999999999999999999999 99999999999999999999999994
No 231
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.87 E-value=5.3e-22 Score=187.74 Aligned_cols=145 Identities=31% Similarity=0.481 Sum_probs=124.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC------
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV------ 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~------ 364 (447)
+++.|+..+.||+|+||+||+|... +++.||+|.+.... .....+.+|+.++.++ +|+||+++++++...
T Consensus 4 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 4 PAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred hhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCC--ccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 4566778889999999999999864 58899999985432 3345688999999988 799999999998753
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...+++|||+.+|+|.+++..... ..++|..+..++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~---~ivh~dl~~~nili~~~~~~~l~Dfg 156 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFG 156 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHEEECCCCCEEEccCC
Confidence 457899999999999999876432 2478999999999999999999998 99999999999999999999999995
No 232
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.87 E-value=1.2e-21 Score=183.80 Aligned_cols=135 Identities=25% Similarity=0.380 Sum_probs=116.9
Q ss_pred ccccCCCceEEEEEe---CCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 302 ILGRGGFGKVYKGRL---ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
.||+|+||.||+|.+ .++..+|+|+++..... ....++.+|+.+++.++||||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 589999999999974 35788999998644322 22346899999999999999999999875 45678999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|++||-
T Consensus 81 ~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~nill~~~~~~kl~Dfg 140 (257)
T cd05116 81 PLNKFLQKNK----HVTEKNITELVHQVSMGMKYLEET---NFVHRDLAARNVLLVTQHYAKISDFG 140 (257)
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccchhhEEEcCCCeEEECCCc
Confidence 9999997543 378999999999999999999998 99999999999999999999999985
No 233
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.87 E-value=8.8e-22 Score=184.61 Aligned_cols=138 Identities=35% Similarity=0.450 Sum_probs=121.1
Q ss_pred CccccCCCceEEEEEeCC--C--cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLAD--G--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|++|.||+|.+.+ + ..||+|.++..........+.+|++++++++||||+++++++.. ...++++||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 3 36999999765443344579999999999999999999999888 889999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++..... ..++|.....++.|++.||+|||+. +++||||||+||+++.++.+|++||.
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~---~i~H~di~p~nil~~~~~~~kl~dfg 142 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESK---RFIHRDLAARNILLASDDKVKIGDFG 142 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhC---CccccccCcccEEEecCCEEEecccc
Confidence 999999987532 3489999999999999999999999 99999999999999999999999984
No 234
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.87 E-value=4.7e-22 Score=187.61 Aligned_cols=142 Identities=26% Similarity=0.403 Sum_probs=125.0
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||+|+. .+++.||+|.++.... .....+.+|+.+++.++||||+++++++...+..++++||
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 3566678899999999999985 4588999999865422 2234578899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... .+++.+...++.|++.||.|||+. +|+||||||+||+++.++.++++||-
T Consensus 88 ~~~~~L~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~nili~~~~~~~l~dfg 151 (267)
T cd06645 88 CGGGSLQDIYHVTG----PLSESQIAYVSRETLQGLYYLHSK---GKMHRDIKGANILLTDNGHVKLADFG 151 (267)
T ss_pred cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEECcce
Confidence 99999999987543 388999999999999999999999 99999999999999999999999984
No 235
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.87 E-value=9e-22 Score=186.21 Aligned_cols=142 Identities=27% Similarity=0.416 Sum_probs=123.3
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc---------cHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG---------GELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~---------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
+|...+.||+|+||.||+|... +++.||+|.++...... ....+.+|+.++..++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 3566789999999999999854 68999999885321111 1124778999999999999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+++|+|.++++... .+++..+..++.|++.||.|||+. +++||||||+||++++++.++++||.
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG----RFEEQLVRFFTEQVLEGLAYLHSK---GILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CeeecCCChhhEEEcCCCeEEEeecc
Confidence 9999999999999999997652 388899999999999999999998 99999999999999999999999985
No 236
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.87 E-value=9.2e-22 Score=189.44 Aligned_cols=143 Identities=28% Similarity=0.481 Sum_probs=121.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||.||+|... ++. .+|+|.+..........++.+|+.+++.++||||+++++++... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 45777899999999999999853 444 57899886543333344688999999999999999999998754 4679
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+|++||-
T Consensus 86 v~e~~~~g~l~~~~~~~~~---~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dikp~Nill~~~~~~kL~Dfg 154 (303)
T cd05110 86 VTQLMPHGCLLDYVHEHKD---NIGSQLLLNWCVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFG 154 (303)
T ss_pred eehhcCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHhhc---CeeccccccceeeecCCCceEEcccc
Confidence 9999999999999876432 378899999999999999999999 99999999999999999999999984
No 237
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.87 E-value=4.1e-22 Score=189.20 Aligned_cols=140 Identities=31% Similarity=0.481 Sum_probs=123.3
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+++++.++||||+++++++...+..++||||++
T Consensus 6 y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06642 6 FTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred HHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccC
Confidence 444577999999999999864 5789999998654333334568999999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|.+++... .+++..+..++.|+++|+.|||+. +++|+||||+||++++++.++++||-
T Consensus 86 ~~~L~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~---~ivH~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06642 86 GGSALDLLKPG-----PLEETYIATILREILKGLDYLHSE---RKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred CCcHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHhcC---CeeccCCChheEEEeCCCCEEEcccc
Confidence 99999988642 378899999999999999999998 99999999999999999999999984
No 238
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.87 E-value=1.1e-22 Score=184.32 Aligned_cols=147 Identities=24% Similarity=0.354 Sum_probs=123.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-----CcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEec-CCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 366 (447)
...|+....||+|.||.||+|.-.+ .+.+|+|.++.+.... -.....+|+.+++.++||||++|..++.+ +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 3468888999999999999996322 3479999997654322 24568999999999999999999998877 778
Q ss_pred eEEEeecCCCCChhhHhhccCCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC----Cceeec
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED----ADQSSK 441 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~----~~~~i~ 441 (447)
.+|++||.+. +|.+.++-++.. ...++-..+..|..||+.|+.|||++ -|+||||||.|||+..+ |.+||+
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~N---WvlHRDLKPaNIlvmgdgperG~VKIa 178 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSN---WVLHRDLKPANILVMGDGPERGRVKIA 178 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhh---heeeccCCcceEEEeccCCccCeeEee
Confidence 8999999987 899998764322 23577888999999999999999999 89999999999999988 889999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
|+-
T Consensus 179 DlG 181 (438)
T KOG0666|consen 179 DLG 181 (438)
T ss_pred ccc
Confidence 983
No 239
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.87 E-value=9.2e-22 Score=190.50 Aligned_cols=145 Identities=30% Similarity=0.335 Sum_probs=127.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|... +++.||+|.+....... ....+.+|++++..++|+||+++++.+...+..+++|
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36788899999999999999965 48999999986543222 3346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+.+++|.+++.... ...+++.....++.|+++||+|||+. +++||||||+||+++.++.++++||-
T Consensus 81 e~~~~~~L~~~~~~~~--~~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~~l~dfg 148 (316)
T cd05574 81 DYCPGGELFRLLQRQP--GKCLSEEVARFYAAEVLLALEYLHLL---GIVYRDLKPENILLHESGHIMLSDFD 148 (316)
T ss_pred EecCCCCHHHHHHhCC--CCccCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChHHeEEcCCCCEEEeecc
Confidence 9999999999987532 23488999999999999999999998 99999999999999999999999985
No 240
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.87 E-value=1.2e-21 Score=187.53 Aligned_cols=143 Identities=29% Similarity=0.409 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.|++.+.||+|+||.||+|+.. +++.+++|.+.... ......+.+|+.+++.++||||+++++++......++||||
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 90 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEF 90 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEec
Confidence 56788899999999999999965 48899999986432 22345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|..++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++|+||-
T Consensus 91 ~~~~~l~~~~~~~~~---~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 155 (292)
T cd06644 91 CPGGAVDAIMLELDR---GLTEPQIQVICRQMLEALQYLHSM---KIIHRDLKAGNVLLTLDGDIKLADFG 155 (292)
T ss_pred CCCCcHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHhcC---CeeecCCCcceEEEcCCCCEEEccCc
Confidence 999999888765332 388999999999999999999998 99999999999999999999999985
No 241
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=4.3e-23 Score=195.05 Aligned_cols=143 Identities=33% Similarity=0.439 Sum_probs=128.9
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.|...+.||+|+||.||+|.. .+++.||+|++.-+...+...++++|+.++..++++||.+++|.+..+..++++||||
T Consensus 14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~ 93 (467)
T KOG0201|consen 14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYC 93 (467)
T ss_pred ccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHh
Confidence 466678899999999999995 4689999999987766666667999999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
.+|++.+.|.... .+++....-|.+++..||.|||++ +.+|||||+.|||+.++|++|++||..
T Consensus 94 ~gGsv~~lL~~~~----~~~E~~i~~ilre~l~~l~ylH~~---~kiHrDIKaanil~s~~g~vkl~DfgV 157 (467)
T KOG0201|consen 94 GGGSVLDLLKSGN----ILDEFEIAVILREVLKGLDYLHSE---KKIHRDIKAANILLSESGDVKLADFGV 157 (467)
T ss_pred cCcchhhhhccCC----CCccceeeeehHHHHHHhhhhhhc---ceecccccccceeEeccCcEEEEecce
Confidence 9999999997653 247777888999999999999999 999999999999999999999999964
No 242
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.87 E-value=8.3e-22 Score=186.30 Aligned_cols=143 Identities=24% Similarity=0.338 Sum_probs=122.8
Q ss_pred cCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|...+.||+|+||.||+|...+ ...||||.............+.+|+.+++.++||||+++++++.. +..++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 457778999999999999998543 246899988654433344578999999999999999999998865 557899
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++..... .+++..+..++.|++.||+|||+. +++||||||+||+++.++.++++||-
T Consensus 85 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~H~dl~p~nili~~~~~~~l~d~g 152 (270)
T cd05056 85 MELAPLGELRSYLQVNKY---SLDLASLILYSYQLSTALAYLESK---RFVHRDIAARNVLVSSPDCVKLGDFG 152 (270)
T ss_pred EEcCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeccccChheEEEecCCCeEEccCc
Confidence 999999999999976432 378999999999999999999998 99999999999999999999999984
No 243
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.87 E-value=4.6e-22 Score=189.57 Aligned_cols=143 Identities=24% Similarity=0.397 Sum_probs=125.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+|... +++.||+|.+....... ....+.+|+++++.++||||+++++++...+..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 35778899999999999999975 58999999986433222 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.++..... .++|.....++.|+++||+|||+. +|+||||+|+||++++++.++++||.
T Consensus 81 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~h~~l~p~ni~~~~~~~~~l~dfg 145 (286)
T cd07846 81 FVDHTVLDDLEKYPN----GLDESRVRKYLFQILRGIEFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 145 (286)
T ss_pred cCCccHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEECCCCcEEEEeee
Confidence 999998887765432 388999999999999999999998 99999999999999999999999985
No 244
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.87 E-value=1.1e-21 Score=187.74 Aligned_cols=145 Identities=28% Similarity=0.453 Sum_probs=124.4
Q ss_pred CCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+|...+.||+|+||.||+|+.. ++..+++|.++... ......+.+|++++++++|+||+++++++...+..++
T Consensus 6 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 6 DIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-LAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-HHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 4677789999999999999742 34568999886432 2223468999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 370 VYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
||||+++++|.+++..... ....++|..+..++.|++.||+|||++ +|+||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~---~i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccCcceEEEccCCc
Confidence 9999999999999975421 122478999999999999999999999 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
++++||-
T Consensus 162 ~~l~dfg 168 (291)
T cd05094 162 VKIGDFG 168 (291)
T ss_pred EEECCCC
Confidence 9999984
No 245
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.87 E-value=1.1e-21 Score=186.74 Aligned_cols=144 Identities=26% Similarity=0.460 Sum_probs=126.0
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|++|.||+|+.. +|+.||||.++..........+.+|+++++.++|+||+++++++...+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4778899999999999999975 588999999876543334456788999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++ +|.+++..... ...+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||-
T Consensus 81 ~~-~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~h~dl~p~ni~~~~~~~~~l~d~g 145 (284)
T cd07836 81 DK-DLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHEN---RVLHRDLKPQNLLINKRGELKLADFG 145 (284)
T ss_pred Cc-cHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEECCCCcEEEeecc
Confidence 85 88888865432 23589999999999999999999998 99999999999999999999999983
No 246
>PLN03150 hypothetical protein; Provisional
Probab=99.87 E-value=1.1e-21 Score=205.00 Aligned_cols=160 Identities=34% Similarity=0.619 Sum_probs=131.5
Q ss_pred ccCchHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC-----ccceeEeCCC-----CCEEEEEcCCCCccccccccccCC
Q 013258 21 MISANAEVDALYIFKSKLQDPNNSLQSWDNLPGNLC-----TWFHITCNPE-----GSVTRVDLGNAALSGELAPELGQL 90 (447)
Q Consensus 21 ~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c-----~w~gv~c~~~-----~~v~~l~L~~~~l~g~~~~~l~~l 90 (447)
..+...|+.||+.+|..+.++.. .+|++ ++| .|.||.|... ..|+.|+|++|.+.|.+|+.++.|
T Consensus 367 ~~t~~~~~~aL~~~k~~~~~~~~--~~W~g---~~C~p~~~~w~Gv~C~~~~~~~~~~v~~L~L~~n~L~g~ip~~i~~L 441 (623)
T PLN03150 367 SKTLLEEVSALQTLKSSLGLPLR--FGWNG---DPCVPQQHPWSGADCQFDSTKGKWFIDGLGLDNQGLRGFIPNDISKL 441 (623)
T ss_pred cccCchHHHHHHHHHHhcCCccc--CCCCC---CCCCCcccccccceeeccCCCCceEEEEEECCCCCccccCCHHHhCC
Confidence 34567799999999999876542 48964 566 6999999521 248999999999999999999999
Q ss_pred CCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcc-cccccc
Q 013258 91 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT-SLNILD 169 (447)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~-~L~~l~ 169 (447)
++|+.|+|++|.++|.+|..++.+++|+.|+|++|+++|.+|+.++++++|+.|+|++|+++|.+|..+.... ++.
T Consensus 442 ~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~~~~~--- 518 (623)
T PLN03150 442 RHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRLLHRA--- 518 (623)
T ss_pred CCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhccccCc---
Confidence 9999999999999999999999999999999999999999999999999999999999999999998876531 122
Q ss_pred cccccccccCCCCCCCCccccccccccccccCCCCCCCC
Q 013258 170 LSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPNTKKPC 208 (447)
Q Consensus 170 ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~C 208 (447)
..++.+|..+|+.+....|
T Consensus 519 --------------------~l~~~~N~~lc~~p~l~~C 537 (623)
T PLN03150 519 --------------------SFNFTDNAGLCGIPGLRAC 537 (623)
T ss_pred --------------------eEEecCCccccCCCCCCCC
Confidence 2346677778876554556
No 247
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.87 E-value=6.1e-23 Score=199.61 Aligned_cols=142 Identities=31% Similarity=0.445 Sum_probs=121.8
Q ss_pred CCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||.|+||.||-|+. .+...||||.+.-...... -.++..|+..|..++|||+|.+.|+|......||||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 55567899999999999995 5688999999853322222 23689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
|- ||-.+++.-.+. ++.+-.+..|+.+.+.||+|||+. +.||||||+.|||+++.|.+|++||..
T Consensus 108 Cl-GSAsDlleVhkK---plqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGS 172 (948)
T KOG0577|consen 108 CL-GSASDLLEVHKK---PLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGS 172 (948)
T ss_pred Hh-ccHHHHHHHHhc---cchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccc
Confidence 96 577777765433 477888999999999999999999 999999999999999999999999965
No 248
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.87 E-value=8.2e-22 Score=189.17 Aligned_cols=141 Identities=22% Similarity=0.352 Sum_probs=125.4
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|+..+.||+|+||.||+|+. .+++.||+|.+..... .....+.+|+.+++.++|+||+++++.+......++||||
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~-~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~ 98 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 98 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCc-chHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecc
Confidence 4677888999999999999985 4688999998865432 2345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++... .+++.+...++.|++.||+|||+. +|+||||||+||++++++.++|+||-
T Consensus 99 ~~~~~L~~~~~~~-----~~~~~~~~~i~~ql~~aL~~LH~~---gi~H~dLkp~Nill~~~~~~kl~dfg 161 (296)
T cd06654 99 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161 (296)
T ss_pred cCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEEECccc
Confidence 9999999998643 278899999999999999999999 99999999999999999999999995
No 249
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.87 E-value=1.4e-21 Score=183.16 Aligned_cols=142 Identities=27% Similarity=0.479 Sum_probs=126.0
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.+|+..+.||+|+||.||++.+.+++.+|+|.++... ....++.+|+++++.++|||++++++++......+++|||+
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 81 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGA--MSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFM 81 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCC--CCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcC
Confidence 3567778999999999999998778899999886432 23457899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|.+++..... .+++..+..++.|++.|++|||+. +++||||||+||+++.++.++++||-
T Consensus 82 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~dl~p~ni~i~~~~~~~l~d~g 145 (256)
T cd05112 82 EHGCLSDYLRAQRG---KFSQETLLGMCLDVCEGMAYLESS---NVIHRDLAARNCLVGENQVVKVSDFG 145 (256)
T ss_pred CCCcHHHHHHhCcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccccccccceEEEcCCCeEEECCCc
Confidence 99999999876432 378899999999999999999998 99999999999999999999999985
No 250
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.87 E-value=4.6e-22 Score=190.23 Aligned_cols=154 Identities=31% Similarity=0.414 Sum_probs=129.7
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
.++++...+++|+..+.||+|+||.||++.. .+++.+|+|.+.... ....++.+|+.++.++ +|||++++++++..
T Consensus 13 ~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~--~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 13 GLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS--DVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc--cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 3445555678899999999999999999986 468899999985432 2234678899999988 89999999999875
Q ss_pred C-----CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 364 V-----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 364 ~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
. +..++|+||+++|+|.++++........+++..+..++.|++.||+|||+. +|+||||||+||++++++.+
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dlkp~nili~~~~~~ 167 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNN---RIIHRDVKGNNILLTTEGGV 167 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCE
Confidence 4 357999999999999998875332333588999999999999999999998 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
|++||.
T Consensus 168 kl~dfg 173 (291)
T cd06639 168 KLVDFG 173 (291)
T ss_pred EEeecc
Confidence 999985
No 251
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.87 E-value=1.5e-21 Score=183.24 Aligned_cols=136 Identities=30% Similarity=0.459 Sum_probs=118.7
Q ss_pred CccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||.||+|.... +..+|+|.++.........++.+|+.+++.+.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 469999999999997532 26899999876544334557899999999999999999999876 4568999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..++.|++.||+|||+. +++||||||+|||+++++.+|++||-
T Consensus 80 ~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lh~~---~i~H~di~p~nili~~~~~~kl~df~ 140 (257)
T cd05060 80 GPLLKYLKKRR----EIPVSDLKELAHQVAMGMAYLESK---HFVHRDLAARNVLLVNRHQAKISDFG 140 (257)
T ss_pred CcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHhhc---CeeccCcccceEEEcCCCcEEecccc
Confidence 99999997653 388999999999999999999998 99999999999999999999999984
No 252
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.87 E-value=1.4e-21 Score=183.71 Aligned_cols=138 Identities=31% Similarity=0.458 Sum_probs=116.2
Q ss_pred CccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCceEEEeecCC
Q 013258 301 NILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLLVYPYMT 375 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~e~~~ 375 (447)
+.||+|+||.||+|... +...+|+|.+...........+.+|+.+++.++||||+++++++.. .+..++++||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999988543322334568899999999999999999998764 556789999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+|.+++..... ..++.....++.|+++||+|||+. +++||||||+|||+++++.+|++||-
T Consensus 81 ~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlk~~nili~~~~~~kl~dfg 143 (262)
T cd05058 81 HGDLRNFIRSETH---NPTVKDLIGFGLQVAKGMEYLASK---KFVHRDLAARNCMLDESFTVKVADFG 143 (262)
T ss_pred CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccCcceEEEcCCCcEEECCcc
Confidence 9999999976432 257788899999999999999998 99999999999999999999999985
No 253
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.87 E-value=6.6e-22 Score=195.10 Aligned_cols=142 Identities=23% Similarity=0.278 Sum_probs=120.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----- 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 365 (447)
..++|+..+.||+|+||.||+++.. +|+.||||.++.... ......+.+|+.+++.++||||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 3467999999999999999999864 589999999864322 223446889999999999999999999886543
Q ss_pred -ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+.+ ++.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~---~ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEecCC
Confidence 46999999975 56666543 277888999999999999999999 99999999999999999999999995
No 254
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.87 E-value=1.2e-21 Score=184.66 Aligned_cols=143 Identities=29% Similarity=0.423 Sum_probs=124.6
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+|+..+.||+|+||.||++.. .+++.||+|.++...... ....+.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999985 568999999986432111 13468899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeeccccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTILR 445 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~~ 445 (447)
|+||+++++|.+++.... .+++..+..++.|++.||.|||+. +++||||||+||+++.++ .++++||..
T Consensus 81 v~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~ql~~al~~LH~~---~i~H~~i~~~nil~~~~~~~~~l~dfg~ 150 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG----AFKEAVIINYTEQLLRGLSYLHEN---QIIHRDVKGANLLIDSTGQRLRIADFGA 150 (268)
T ss_pred EEeccCCCcHHHHHHHhC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccccc
Confidence 999999999999997643 378999999999999999999999 999999999999999876 589999853
No 255
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.87 E-value=1.7e-21 Score=183.81 Aligned_cols=141 Identities=28% Similarity=0.457 Sum_probs=123.5
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc--------HHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG--------ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
|...+.||+|+||.||+|... +++.+|+|.+........ ...+.+|+.+++.++||||+++++++...+..
T Consensus 2 ~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~ 81 (267)
T cd06628 2 WIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHL 81 (267)
T ss_pred ccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCcc
Confidence 566789999999999999864 588999998864332211 13578999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+++++|.+++.... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||-
T Consensus 82 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lH~~---~ivH~di~p~nil~~~~~~~~l~dfg 151 (267)
T cd06628 82 NIFLEYVPGGSVAALLNNYG----AFEETLVRNFVRQILKGLNYLHNR---GIIHRDIKGANILVDNKGGIKISDFG 151 (267)
T ss_pred EEEEEecCCCCHHHHHHhcc----CccHHHHHHHHHHHHHHHHHHHhc---CcccccCCHHHEEEcCCCCEEecccC
Confidence 99999999999999997643 378889999999999999999998 99999999999999999999999985
No 256
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.87 E-value=2e-21 Score=181.89 Aligned_cols=143 Identities=34% Similarity=0.513 Sum_probs=125.5
Q ss_pred CCCCCccccCCCceEEEEEeCC-----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 297 FSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
|++.+.||+|+||.||+++..+ +..||+|.++..........+..|++.+..++|+||+++++++...+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456889999999999998653 38899999976543334567999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++...... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||-
T Consensus 81 e~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh~~---~~~h~dl~~~nil~~~~~~~~l~dfg 148 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPK--ELSLSDLLSFALQIARGMEYLESK---NFIHRDLAARNCLVGENLVVKISDFG 148 (258)
T ss_pred eccCCCCHHHHHHhhhhc--cCCHHHHHHHHHHHHHHHHHHhcC---CeeecccccceEEEccCCeEEEcccC
Confidence 999999999998764321 178999999999999999999999 99999999999999999999999984
No 257
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87 E-value=1.7e-21 Score=216.01 Aligned_cols=190 Identities=32% Similarity=0.557 Sum_probs=131.9
Q ss_pred hHHHHHHHHHHHHHhcccCchHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEcCCCCcccccc
Q 013258 5 VLVFYLVSTIVLVALPMISANAEVDALYIFKSKLQDPNNSLQSWDNLPGNLCTWFHITCNPEGSVTRVDLGNAALSGELA 84 (447)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~v~~l~L~~~~l~g~~~ 84 (447)
|-|++|++.+ +......+...|..||+.||.++.+|...+.+|+. ..++|.|.||+|+..++|+.|||++|.++|.++
T Consensus 9 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~-~~~~c~w~gv~c~~~~~v~~L~L~~~~i~~~~~ 86 (968)
T PLN00113 9 CPYLIFMLFF-LFLNFSMLHAEELELLLSFKSSINDPLKYLSNWNS-SADVCLWQGITCNNSSRVVSIDLSGKNISGKIS 86 (968)
T ss_pred CChHHHHHHH-HHHHccCCCHHHHHHHHHHHHhCCCCcccCCCCCC-CCCCCcCcceecCCCCcEEEEEecCCCccccCC
Confidence 4454444332 33344445678999999999999988888999964 468999999999977899999999999999999
Q ss_pred ccccCCCCCCEEECCCCccCCCCChhhc-CCCCCcEEEccCCcccccCC----------------------ccccCCCCC
Q 013258 85 PELGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIP----------------------DTLANLKQL 141 (447)
Q Consensus 85 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p----------------------~~~~~l~~L 141 (447)
+.+..+++|+.|+|++|.++|.+|..+. .+++|++|+|++|+++|.+| ..++++++|
T Consensus 87 ~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~~~l~~L~~L~Ls~n~~~~~~p~~~~~l~~L 166 (968)
T PLN00113 87 SAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPRGSIPNLETLDLSNNMLSGEIPNDIGSFSSL 166 (968)
T ss_pred hHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCccccCCCCEEECcCCcccccCChHHhcCCCC
Confidence 9999999999999999999988888765 77777777777777665554 444445555
Q ss_pred CeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccc
Q 013258 142 KYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 142 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 196 (447)
++|+|++|.+.+.+|..++++++|+.|++++|.+++.+|.. +.+..++.+.+.+|
T Consensus 167 ~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n 222 (968)
T PLN00113 167 KVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYN 222 (968)
T ss_pred CEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCC
Confidence 55555555555555555555555555555555555544432 22333444444433
No 258
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.87 E-value=6.1e-22 Score=185.85 Aligned_cols=142 Identities=26% Similarity=0.350 Sum_probs=126.3
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+|+..+.||+|+||.||+|+.. +++.||+|.+...... .....+.+|++++++++||||+++++++...+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4777899999999999999965 5899999998654321 234578999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+.+++|.+++... ..+++.....++.|+++||.|||+. +++|+||||+||++++++.++++||-
T Consensus 81 ~~~~~~L~~~l~~~----~~l~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~l~d~~ 145 (258)
T cd05578 81 LLLGGDLRYHLSQK----VKFSEEQVKFWICEIVLALEYLHSK---GIIHRDIKPDNILLDEQGHVHITDFN 145 (258)
T ss_pred CCCCCCHHHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEEcCCCCEEEeecc
Confidence 99999999998764 2488899999999999999999998 99999999999999999999999984
No 259
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.87 E-value=4e-22 Score=195.04 Aligned_cols=145 Identities=28% Similarity=0.423 Sum_probs=128.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC---C--cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD---G--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~---~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
..+.....+.||+|-||.||+|.+.+ | -.||||..+.+...+....|+.|..+|+.++|||||+++|+|.+ ...
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 33445556889999999999998532 2 35899999888777777789999999999999999999999876 458
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|||.++-|.|.++|+..+.. ++......++.|+..||+|||+. ++|||||..+|||+.+...+|++||.
T Consensus 466 WivmEL~~~GELr~yLq~nk~s---L~l~tL~ly~~Qi~talaYLeSk---rfVHRDIAaRNiLVsSp~CVKLaDFG 536 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQNKDS---LPLRTLTLYCYQICTALAYLESK---RFVHRDIAARNILVSSPQCVKLADFG 536 (974)
T ss_pred eEEEecccchhHHHHHHhcccc---chHHHHHHHHHHHHHHHHHHHhh---chhhhhhhhhheeecCcceeeecccc
Confidence 9999999999999999987653 78888999999999999999999 99999999999999999999999995
No 260
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.87 E-value=1.5e-21 Score=185.46 Aligned_cols=141 Identities=30% Similarity=0.454 Sum_probs=125.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.|+..+.||+|+||.||+|... +++.||+|.++..........+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999864 588999999865433333456899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++... .+++.....++.|++.||+|||+. +++|+||+|+||++++++.++++||.
T Consensus 85 ~~~~L~~~i~~~-----~l~~~~~~~~~~~l~~~l~~lh~~---~ivH~dl~p~Nil~~~~~~~~l~dfg 146 (277)
T cd06640 85 GGGSALDLLRAG-----PFDEFQIATMLKEILKGLDYLHSE---KKIHRDIKAANVLLSEQGDVKLADFG 146 (277)
T ss_pred CCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CccCcCCChhhEEEcCCCCEEEcccc
Confidence 999999998643 378888999999999999999998 99999999999999999999999984
No 261
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.87 E-value=1.6e-21 Score=185.19 Aligned_cols=140 Identities=31% Similarity=0.473 Sum_probs=124.2
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|+..+.||+|+||.||+|... +++.||+|.+...........+.+|+.++.+++||||+++++++...+..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 666788999999999999864 6889999988644333334568899999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|.+++... .+++.....++.|++.|+.|||+. +++|+||||+||+++.++.++++||-
T Consensus 86 ~~~l~~~i~~~-----~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~dl~p~Ni~i~~~~~~~l~dfg 146 (277)
T cd06641 86 GGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFG 146 (277)
T ss_pred CCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHccC---CeecCCCCHHhEEECCCCCEEEeecc
Confidence 99999998642 378999999999999999999998 99999999999999999999999984
No 262
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.87 E-value=1e-21 Score=187.63 Aligned_cols=147 Identities=27% Similarity=0.349 Sum_probs=125.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 371 (447)
++|...+.||.|++|.||++... +++.+|+|.+..........++.+|+++++.++||||+++++++... +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 35777889999999999999974 58899999986543333455789999999999999999999988653 4689999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.........+++.....++.|++.||.|||+. +++|+||+|+||++++++.++++||-
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~---~i~H~dl~~~nil~~~~~~~~l~dfg 150 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSR---KIIHRDIKPSNILLTRKGQVKLCDFG 150 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecCCeEEEeecc
Confidence 99999999988765333334578889999999999999999998 99999999999999999999999984
No 263
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.86 E-value=1.7e-21 Score=185.46 Aligned_cols=141 Identities=30% Similarity=0.454 Sum_probs=123.1
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|++.+.||+|+||.||+|+.. ++..+++|.+.... ......+.+|+++++.++||||+++++++...+..++|+||++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 455678999999999999965 47888999885432 2233468899999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|..++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++++||.
T Consensus 86 ~~~l~~~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~---~i~H~dlkp~nili~~~~~~kl~dfg 148 (282)
T cd06643 86 GGAVDAVMLELE---RPLTEPQIRVVCKQTLEALNYLHEN---KIIHRDLKAGNILFTLDGDIKLADFG 148 (282)
T ss_pred CCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEccCCCEEEcccc
Confidence 999998876532 2489999999999999999999998 99999999999999999999999985
No 264
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.86 E-value=2.2e-21 Score=182.33 Aligned_cols=143 Identities=31% Similarity=0.454 Sum_probs=127.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||+|... +++.+|+|.++..... ....+.+|+++++.++||||+++++++...+..+++|||
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~-~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGD-DFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchh-hHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 56888899999999999999864 5789999998654322 445789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+||++++++.++++||-
T Consensus 82 ~~~~~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g 146 (262)
T cd06613 82 CGGGSLQDIYQVTR---GPLSELQIAYVCRETLKGLAYLHET---GKIHRDIKGANILLTEDGDVKLADFG 146 (262)
T ss_pred CCCCcHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CceecCCChhhEEECCCCCEEECccc
Confidence 99999999887642 2388899999999999999999998 99999999999999999999999984
No 265
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.86 E-value=1.8e-21 Score=182.35 Aligned_cols=140 Identities=30% Similarity=0.474 Sum_probs=122.2
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|++.+.||+|+||.||++.. +++.||+|.++... ....+.+|+.++..++|||++++++++... ..+++|||+
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~---~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~ 80 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV---TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELM 80 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc---hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECC
Confidence 4577889999999999999975 57889999886432 234688999999999999999999988654 579999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||+++.++.++++||-
T Consensus 81 ~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~~~H~dl~p~nili~~~~~~kl~Dfg 145 (254)
T cd05083 81 SKGNLVNFLRTRGR--ALVSVIQLLQFSLDVAEGMEYLESK---KLVHRDLAARNILVSEDGVAKVSDFG 145 (254)
T ss_pred CCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccccCcceEEEcCCCcEEECCCc
Confidence 99999999976432 2478899999999999999999998 99999999999999999999999985
No 266
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.86 E-value=3.6e-23 Score=186.42 Aligned_cols=140 Identities=28% Similarity=0.457 Sum_probs=126.2
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|++.+.||+|+||.||++.++ .|+.+|+|.+..+ .+.+++..|+.+|++++.|++|++||.|.....+|+|||||-
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~---sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD---TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc---chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 455688999999999999865 5999999998654 345679999999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
.|+..+.++.+. .++.+.....+....++||+|||.. .-||||||+.|||++-+|.+|++||-.
T Consensus 112 AGSiSDI~R~R~---K~L~E~EIs~iL~~TLKGL~YLH~~---~KIHRDIKAGNILLNT~G~AKLADFGV 175 (502)
T KOG0574|consen 112 AGSISDIMRARR---KPLSEQEISAVLRDTLKGLQYLHDL---KKIHRDIKAGNILLNTDGIAKLADFGV 175 (502)
T ss_pred CCcHHHHHHHhc---CCccHHHHHHHHHHHHhHHHHHHHH---HHHHhhcccccEEEcccchhhhhhccc
Confidence 999999998754 3589999999999999999999998 789999999999999999999999964
No 267
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.86 E-value=2.5e-21 Score=181.22 Aligned_cols=141 Identities=30% Similarity=0.457 Sum_probs=127.4
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||+|...+ ++.+++|.++.... ..++.+|+++++.++||||+++++++......++++||
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~---~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~ 79 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED---LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEY 79 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH---HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEec
Confidence 578888999999999999999764 78999999865422 45799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... ..+++.....++.|++.||.|||+. +|+||||+|+||++++++.++++||-
T Consensus 80 ~~~~~L~~~l~~~~---~~l~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~ni~~~~~~~~~l~dfg 144 (256)
T cd06612 80 CGAGSVSDIMKITN---KTLTEEEIAAILYQTLKGLEYLHSN---KKIHRDIKAGNILLNEEGQAKLADFG 144 (256)
T ss_pred CCCCcHHHHHHhCc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEECCCCcEEEcccc
Confidence 99999999987543 2489999999999999999999998 99999999999999999999999984
No 268
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.86 E-value=1.8e-21 Score=184.49 Aligned_cols=142 Identities=30% Similarity=0.411 Sum_probs=127.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||.|+||.||+|+.. +++.||+|.+...........+.+|+++++.++|+||+++++++......++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 35777889999999999999965 58899999986544333445688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++||.
T Consensus 81 ~~~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~g 143 (274)
T cd06609 81 CGGGSCLDLLKPG-----KLDETYIAFILREVLLGLEYLHEE---GKIHRDIKAANILLSEEGDVKLADFG 143 (274)
T ss_pred eCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEcccc
Confidence 9999999998754 488999999999999999999998 99999999999999999999999985
No 269
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.86 E-value=2e-21 Score=184.88 Aligned_cols=146 Identities=31% Similarity=0.465 Sum_probs=125.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
.+|...+.||+|+||.||++... ++..+|+|.++... ......+.+|+++++.++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~ 83 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLL 83 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-HHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceE
Confidence 35677899999999999999642 35689999886432 233457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCC-----------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 369 LVYPYMTNGSVASRLRERQSS-----------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~-----------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
++|||+++|+|.++++..... ...+++..+..++.|++.|++|||+. +++||||||+|||+++++.
T Consensus 84 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 84 MVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASL---HFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHC---CeecccccHhhEEEcCCCC
Confidence 999999999999998764311 12478999999999999999999998 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
++++||.
T Consensus 161 ~kL~dfg 167 (280)
T cd05092 161 VKIGDFG 167 (280)
T ss_pred EEECCCC
Confidence 9999985
No 270
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.86 E-value=1.4e-21 Score=183.98 Aligned_cols=143 Identities=31% Similarity=0.404 Sum_probs=127.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|+||.||++... +++.+|+|.+..........++.+|+++++.++||||+++++++...+..++++||+
T Consensus 2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~ 81 (265)
T cd06605 2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYM 81 (265)
T ss_pred cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEec
Confidence 5677789999999999999975 589999999876543444557899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|.+++.... ..+++.....++.|++.||+|||+ . +++||||||+||++++++.++++||-
T Consensus 82 ~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~---~i~H~dl~~~ni~~~~~~~~~l~d~g 146 (265)
T cd06605 82 DGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKH---KIIHRDVKPSNILVNSRGQIKLCDFG 146 (265)
T ss_pred CCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 9999999997643 347888999999999999999999 7 99999999999999999999999984
No 271
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.86 E-value=9.3e-22 Score=193.75 Aligned_cols=142 Identities=23% Similarity=0.289 Sum_probs=120.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 364 (447)
..++|+..+.||+|+||.||+++.. +++.||||.+..... ......+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4568999999999999999999854 588999999865332 22234678899999999999999999988643
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~------~l~~~~~~~~~~qi~~aL~~LH~~---givHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChHHEEECCCCCEEEeeCc
Confidence 346999999965 67666643 278888999999999999999999 99999999999999999999999995
No 272
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.86 E-value=2.4e-21 Score=182.06 Aligned_cols=143 Identities=29% Similarity=0.437 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|++|.||+|+.. +++.|+||.+...........+.+|+..+..++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36788899999999999999976 48999999986554333455799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... .+++.....++.|+++|++|||+ . +++||||+|+||+++.++.++++||-
T Consensus 81 ~~~~~L~~~l~~~~----~l~~~~~~~~~~~l~~~l~~lh~~~---~~~H~~l~~~ni~~~~~~~~~l~df~ 145 (264)
T cd06623 81 MDGGSLADLLKKVG----KIPEPVLAYIARQILKGLDYLHTKR---HIIHRDIKPSNLLINSKGEVKIADFG 145 (264)
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHhccC---CCccCCCCHHHEEECCCCCEEEccCc
Confidence 99999999997642 48899999999999999999999 8 99999999999999999999999985
No 273
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.86 E-value=2.2e-21 Score=182.47 Aligned_cols=142 Identities=30% Similarity=0.479 Sum_probs=126.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4777899999999999999864 6899999998654332 2345789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... .+++..+..++.|++.||+|||+. +|+|+||||+||++++++.+|++||.
T Consensus 81 ~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~kl~d~g 144 (264)
T cd06626 81 CSGGTLEELLEHGR----ILDEHVIRVYTLQLLEGLAYLHSH---GIVHRDIKPANIFLDHNGVIKLGDFG 144 (264)
T ss_pred CCCCcHHHHHhhcC----CCChHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEcccc
Confidence 99999999987642 378889999999999999999998 99999999999999999999999985
No 274
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.86 E-value=1.8e-21 Score=185.78 Aligned_cols=143 Identities=29% Similarity=0.438 Sum_probs=117.7
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEec-----CC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCTT-----VT 365 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~~-----~~ 365 (447)
+|++.+.||+|+||+||+|+.. +++.||+|.++...... ....+.+|++++..+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4777899999999999999865 68999999986543222 223466777777655 79999999998764 24
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..+++|||+. ++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|++||-
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~---~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccC
Confidence 5789999997 488888875432 2378999999999999999999999 99999999999999999999999984
No 275
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.86 E-value=1.2e-21 Score=184.88 Aligned_cols=141 Identities=32% Similarity=0.492 Sum_probs=120.7
Q ss_pred CccccCCCceEEEEEeCC-------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 301 NILGRGGFGKVYKGRLAD-------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.||+|+||.||+|+..+ ++.+|+|.+..........++.+|+.+++.++||||+++++++...+..+++|||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886543333455789999999999999999999999998999999999
Q ss_pred CCCCChhhHhhccCC---CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-----ceeecccc
Q 013258 374 MTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-----DQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~~i~df~ 444 (447)
+++|+|.+++..... ....++|..+..++.|++.||+|||+. +++|+||||+||++++++ .++++||.
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQM---HFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhC---CcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 999999999976422 123478899999999999999999998 999999999999999887 89999985
No 276
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.86 E-value=2.5e-21 Score=183.71 Aligned_cols=141 Identities=26% Similarity=0.439 Sum_probs=125.2
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~ 371 (447)
.|+..+.||+|+||.||+|.. .+++.||+|.++.........++.+|+.+++.++ |||++++++++......++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 366778999999999999996 4689999999865443344456889999999987 999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.++++.. .+++.....++.|++.||.|||+. +|+||||+|+||++++++.++++||-
T Consensus 82 e~~~~~~L~~~~~~~-----~l~~~~~~~i~~~i~~~l~~lh~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 146 (277)
T cd06917 82 EYAEGGSVRTLMKAG-----PIAEKYISVIIREVLVALKYIHKV---GVIHRDIKAANILVTNTGNVKLCDFG 146 (277)
T ss_pred ecCCCCcHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCcCHHHEEEcCCCCEEEccCC
Confidence 999999999988653 388999999999999999999998 99999999999999999999999985
No 277
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.86 E-value=5.9e-22 Score=196.52 Aligned_cols=142 Identities=27% Similarity=0.403 Sum_probs=124.2
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-C-----CCccceeeEEecCCceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-H-----RNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H-----~niv~l~~~~~~~~~~~ 368 (447)
+|.+.++||+|+||+|-+|.. .+++.||||+++... .-..+-..|+.+|..++ | -|+|++++++...++.+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k--~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlc 264 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKK--RFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLC 264 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccCh--HHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccccccee
Confidence 678899999999999999984 569999999997653 23446788999999887 4 48999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC--ceeeccccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA--DQSSKTILR 445 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~--~~~i~df~~ 445 (447)
+|+|.+. -+|+++|+..... .++......|+.||+.||.+||.. +|||+|||||||||.+-. .+||.||-.
T Consensus 265 iVfELL~-~NLYellK~n~f~--Glsl~~ir~~~~Qil~~L~~L~~l---~IIHcDLKPENILL~~~~r~~vKVIDFGS 337 (586)
T KOG0667|consen 265 IVFELLS-TNLYELLKNNKFR--GLSLPLVRKFAQQILTALLFLHEL---GIIHCDLKPENILLKDPKRSRIKVIDFGS 337 (586)
T ss_pred eeehhhh-hhHHHHHHhcCCC--CCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCChhheeeccCCcCceeEEeccc
Confidence 9999885 4999999987543 488899999999999999999999 999999999999998754 789999964
No 278
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.86 E-value=3.9e-21 Score=181.32 Aligned_cols=142 Identities=27% Similarity=0.448 Sum_probs=122.4
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc----ccHHHHHHHHHHHhcCCCCCccceeeEEec--CCceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS----GGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~ 368 (447)
+|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++||||+++++++.. ....+
T Consensus 3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 82 (266)
T cd06651 3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT 82 (266)
T ss_pred CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence 6888899999999999999864 5899999988543211 122358889999999999999999998865 35678
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++||+++++|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 83 l~~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~LH~~---~i~H~~l~p~nil~~~~~~~~l~dfg 151 (266)
T cd06651 83 IFMEYMPGGSVKDQLKAYG----ALTESVTRKYTRQILEGMSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (266)
T ss_pred EEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCC
Confidence 9999999999999987643 378899999999999999999998 99999999999999999999999985
No 279
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.86 E-value=1.3e-21 Score=195.27 Aligned_cols=137 Identities=25% Similarity=0.283 Sum_probs=120.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..+|.+.+.||+|+||.||+|... .++.||+|.+... ....+|+++++.++||||+++++++......+++
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~------~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv 164 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG------KTPGREIDILKTISHRAIINLIHAYRWKSTVCMV 164 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc------ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEE
Confidence 356888999999999999999753 3578999987532 2356899999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+. ++|.+++... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.++.++|+||.
T Consensus 165 ~e~~~-~~l~~~l~~~----~~l~~~~~~~i~~ql~~aL~~LH~~---givHrDlkp~Nill~~~~~~~l~DfG 230 (392)
T PHA03207 165 MPKYK-CDLFTYVDRS----GPLPLEQAITIQRRLLEALAYLHGR---GIIHRDVKTENIFLDEPENAVLGDFG 230 (392)
T ss_pred ehhcC-CCHHHHHHhc----CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEccCc
Confidence 99995 6888888433 2489999999999999999999999 99999999999999999999999995
No 280
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.86 E-value=2.5e-21 Score=185.04 Aligned_cols=142 Identities=27% Similarity=0.332 Sum_probs=123.2
Q ss_pred CCCCCCccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 296 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
+|++.+.||+|+||.||+++. .+|+.||+|+++.... ......+.+|++++..+ +|+||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 467788999999999999985 3688999999864321 12234678899999999 599999999999988899
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+||+++++|.+++.... .+++.....++.|++.||.|||+. +++||||||+|||+++++.++++||.
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 150 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE----RFKEQEVQIYSGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFG 150 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeEECCCCCEEEeeCc
Confidence 99999999999999987643 378888999999999999999998 99999999999999999999999984
No 281
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.86 E-value=9.2e-22 Score=184.84 Aligned_cols=137 Identities=26% Similarity=0.406 Sum_probs=115.8
Q ss_pred CccccCCCceEEEEEeCC-C-------cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 301 NILGRGGFGKVYKGRLAD-G-------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+.||+|+||.||+|.... + ..+|+|.+.... ......+.+|+.+++.++||||+++++++..++..++|||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e 79 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSH-RNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQE 79 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchh-HHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEe
Confidence 469999999999998532 2 348888775332 2223468899999999999999999999999899999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc--------eeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--------QSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--------~~i~df~ 444 (447)
|+++|+|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.+++ ++++||.
T Consensus 80 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g 153 (258)
T cd05078 80 YVKFGSLDTYLKKNKN---LINISWKLEVAKQLAWALHFLEDK---GLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPG 153 (258)
T ss_pred cCCCCcHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEEecccccccCCCceEEecccc
Confidence 9999999999976532 478999999999999999999999 9999999999999998876 4788874
No 282
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.86 E-value=3.9e-21 Score=181.01 Aligned_cols=146 Identities=29% Similarity=0.421 Sum_probs=128.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||+||+|... ++..+|+|++...........+.+|++.++.++|+||+++++.+...+..++++||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 46888899999999999999854 58899999986544333455799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.++++.... ...+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||-
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~---~i~h~~l~p~ni~~~~~~~~~l~df~ 147 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSN---GQIHRDIKAGNILLGEDGSVKIADFG 147 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHhEEEcCCCCEEEcccc
Confidence 999999999976422 12478999999999999999999998 99999999999999999999999984
No 283
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.86 E-value=2.7e-21 Score=181.17 Aligned_cols=144 Identities=20% Similarity=0.300 Sum_probs=125.7
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.+|+++.. +++.||+|.+..... .....++.+|+.+++.++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4777899999999999999854 689999999864322 22334789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+.+..... ..+++.....++.|++.|++|||+. +++|+||+|+||++++++.++++||.
T Consensus 81 ~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~l~~~nil~~~~~~~~l~d~~ 146 (256)
T cd08218 81 CEGGDLYKKINAQRG--VLFPEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTIKLGDFG 146 (256)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEEeecc
Confidence 999999999876432 2378899999999999999999998 99999999999999999999999985
No 284
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.86 E-value=2.7e-21 Score=184.22 Aligned_cols=142 Identities=26% Similarity=0.392 Sum_probs=125.8
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|++.+.||+|+||.||+|+.. +|+.||+|++..... ......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4677889999999999999964 689999999865432 22244689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+ +++|.+++.... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++||.
T Consensus 81 ~-~~~L~~~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~~~~~~~~~l~dfg 144 (286)
T cd07832 81 M-PSDLSEVLRDEE---RPLPEAQVKSYMRMLLKGVAYMHAN---GIMHRDLKPANLLISADGVLKIADFG 144 (286)
T ss_pred c-CCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCHHHEEEcCCCcEEEeeee
Confidence 9 999999987643 3489999999999999999999998 99999999999999999999999985
No 285
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.86 E-value=2e-21 Score=192.06 Aligned_cols=141 Identities=22% Similarity=0.284 Sum_probs=119.8
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 365 (447)
.++|+..+.||+|+||.||+++.. +++.||||.+..... ......+.+|+.+++.++||||+++++++... .
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~~ 102 (364)
T cd07875 23 LKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQ 102 (364)
T ss_pred hcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeecccccccccC
Confidence 467899999999999999999854 588999999865322 22334688999999999999999999987543 3
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+++ +|.+.+.. .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 103 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 103 DVYIVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred eEEEEEeCCCC-CHHHHHHh------cCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEECCCCcEEEEeCC
Confidence 46999999965 77777643 277888999999999999999999 99999999999999999999999995
No 286
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.86 E-value=2.2e-21 Score=184.80 Aligned_cols=143 Identities=22% Similarity=0.441 Sum_probs=124.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|++|.||+|+.. +++.||||.++..... .....+.+|++++++++||||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4778899999999999999864 5899999998654322 2234688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. ++|.+++..... ..+++..+..++.|++.||+|||+. +++||||||+||++++++.+|++||.
T Consensus 81 ~~-~~l~~~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lh~~---~i~H~~l~p~nill~~~~~~~l~dfg 145 (284)
T cd07860 81 LH-QDLKKFMDASPL--SGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 145 (284)
T ss_pred cc-cCHHHHHHhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 95 689888865432 3488999999999999999999998 99999999999999999999999985
No 287
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.86 E-value=2.1e-21 Score=188.45 Aligned_cols=135 Identities=21% Similarity=0.233 Sum_probs=108.0
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC--CCcEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccc-eeeEEecC
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLR-LYGFCTTV 364 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~-l~~~~~~~ 364 (447)
...++|...+.||+|+||+||+|+.. +++.||||++..... ......|.+|++++..++|+|+++ +++ .
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~----~ 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLA----T 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEE----c
Confidence 44577999999999999999999864 477789998753211 112346899999999999999985 443 2
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCC-CCCceeeCCCCceeeccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV-KAANILLDEDADQSSKTI 443 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~~i~df 443 (447)
+..++||||+++++|... .. .. ...++.|+++||+|||+. +|+|||| ||+|||++.++.+||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~~-------~~---~~~~~~~i~~aL~~lH~~---gIiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-RP-------HG---DPAWFRSAHRALRDLHRA---GITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHHh-Cc-------cc---hHHHHHHHHHHHHHHHHC---CCeeCCCCCcceEEEcCCCCEEEEEC
Confidence 457999999999999632 11 01 146788999999999999 9999999 999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 157 G 157 (365)
T PRK09188 157 Q 157 (365)
T ss_pred c
Confidence 5
No 288
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.86 E-value=1.5e-21 Score=185.92 Aligned_cols=142 Identities=22% Similarity=0.428 Sum_probs=122.7
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||+|+.. +|+.||+|.++..... .....+.+|+++++.++||||+++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 3677789999999999999965 5899999998643222 2234578899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. ++|.+++.... ..+++..+..++.|+++||.|||+. +|+||||||+||+++.++.++++||.
T Consensus 81 ~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dl~~~nil~~~~~~~~l~dfg 144 (284)
T cd07839 81 CD-QDLKKYFDSCN---GDIDPEIVKSFMFQLLKGLAFCHSH---NVLHRDLKPQNLLINKNGELKLADFG 144 (284)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEcCCCcEEECccc
Confidence 97 58888776532 2389999999999999999999999 99999999999999999999999985
No 289
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.86 E-value=1.1e-21 Score=208.49 Aligned_cols=153 Identities=16% Similarity=0.263 Sum_probs=124.9
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec--CCce
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEK 367 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~ 367 (447)
...++|.+.+.||+|+||+||+|+.. ++..+|+|.+...... .....+..|+.++..++|||||++++++.. ....
T Consensus 10 ~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~l 89 (1021)
T PTZ00266 10 SRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKL 89 (1021)
T ss_pred cccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEE
Confidence 34567888999999999999999965 5788999998643322 223468999999999999999999998854 3568
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCC----CCeeecCCCCCceeeCCC--------
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCD----PKIIHRDVKAANILLDED-------- 435 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~----~~ivHrDlkp~NILl~~~-------- 435 (447)
++||||+++|+|.++|.........+++..+..|+.||+.||+|||+... .+||||||||+||||+.+
T Consensus 90 yIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~ 169 (1021)
T PTZ00266 90 YILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKIT 169 (1021)
T ss_pred EEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccccccc
Confidence 99999999999999997643333458999999999999999999998521 259999999999999753
Q ss_pred ---------Cceeecccc
Q 013258 436 ---------ADQSSKTIL 444 (447)
Q Consensus 436 ---------~~~~i~df~ 444 (447)
..+||+||-
T Consensus 170 ~~~~n~ng~~iVKLsDFG 187 (1021)
T PTZ00266 170 AQANNLNGRPIAKIGDFG 187 (1021)
T ss_pred ccccccCCCCceEEccCC
Confidence 348999985
No 290
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.86 E-value=2.6e-21 Score=185.74 Aligned_cols=141 Identities=21% Similarity=0.363 Sum_probs=125.8
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|+..+.||.|+||.||+|.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 97 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQK-QPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEY 97 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEeccc-CchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEe
Confidence 3578889999999999999985 468999999886432 22345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++++||.
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---~i~H~dL~p~Nili~~~~~~kl~dfg 160 (296)
T cd06655 98 LAGGSLTDVVTET-----CMDEAQIAAVCRECLQALEFLHAN---QVIHRDIKSDNVLLGMDGSVKLTDFG 160 (296)
T ss_pred cCCCcHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEccCc
Confidence 9999999988653 378999999999999999999999 99999999999999999999999985
No 291
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.86 E-value=2.6e-21 Score=185.27 Aligned_cols=143 Identities=24% Similarity=0.373 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv 370 (447)
++|+..+.||+|+||.||+|... +++.+|+|.++...... ....+.+|+.++.+++||||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46778899999999999999975 58899999996543222 233577899999999999999999998877 889999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+. ++|.+.+..... .+++.....++.|+++||+|||+. +++||||||+||++++++.++++||-
T Consensus 85 ~e~~~-~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 85 MEYVE-HDLKSLMETMKQ---PFLQSEVKCLMLQLLSGVAHLHDN---WILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred ehhcC-cCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCcEEEeecC
Confidence 99997 599888876432 489999999999999999999998 99999999999999999999999984
No 292
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.86 E-value=3.7e-21 Score=180.76 Aligned_cols=149 Identities=23% Similarity=0.333 Sum_probs=124.2
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec--CCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~ 371 (447)
+|+..+.||+|+||.||++.. .+++.+|+|.++.... .....++..|+++++.++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 477789999999999999985 4688999999864332 2223468899999999999999999998764 34578999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC--CCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--DPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.........+++..+..++.|++.||+|||..+ ..+++|+||||+||++++++.+|++||.
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g 155 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFG 155 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccc
Confidence 999999999999765333446899999999999999999999221 2299999999999999999999999985
No 293
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.85 E-value=4e-22 Score=188.82 Aligned_cols=148 Identities=28% Similarity=0.395 Sum_probs=129.4
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
+..+.|..-++||+|+||+||-++.+ +|+.||.|.+.+.. ...++.-.+.|-.++.+++.+.||.+--.|.+.+.++
T Consensus 182 vt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LC 261 (591)
T KOG0986|consen 182 VTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALC 261 (591)
T ss_pred ccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceE
Confidence 33456888899999999999999854 69999999885432 2233445788999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+..|.||+|.-+|...+. +.+++..+..++.+|+.||++||.. +||.||+||+|||+|++|+++|+|+-
T Consensus 262 lVLtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~---~iVYRDLKPeNILLDd~GhvRISDLG 332 (591)
T KOG0986|consen 262 LVLTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRR---RIVYRDLKPENILLDDHGHVRISDLG 332 (591)
T ss_pred EEEEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhc---ceeeccCChhheeeccCCCeEeeccc
Confidence 99999999999998877653 4599999999999999999999999 99999999999999999999999974
No 294
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.85 E-value=4.7e-21 Score=180.60 Aligned_cols=143 Identities=27% Similarity=0.433 Sum_probs=122.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc----cccHHHHHHHHHHHhcCCCCCccceeeEEecC--Cce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT----SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 367 (447)
.+|...+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|++++++++|+||+++++++... ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 36788899999999999999864 589999998743211 12234688999999999999999999988764 457
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+++++|.+++.... .+++.....++.|++.||.|||+. +++||||||+||++++++.++++||.
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~al~~LH~~---~i~H~dl~p~ni~i~~~~~~~l~dfg 151 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYG----ALTENVTRRYTRQILQGVSYLHSN---MIVHRDIKGANILRDSAGNVKLGDFG 151 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECccc
Confidence 89999999999999987543 278889999999999999999999 99999999999999999999999984
No 295
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.85 E-value=4.2e-21 Score=183.84 Aligned_cols=146 Identities=26% Similarity=0.404 Sum_probs=122.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCC-CCCccceeeEEecCCc-----
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE----- 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~----- 366 (447)
++|+..+.||+|+||.||+|... +++.||+|.++..... .....+.+|+.+++.++ ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888899999999999999965 5899999988654322 22346888999999995 6999999999887665
Q ss_pred eEEEeecCCCCChhhHhhccCCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
.+++|||+++ +|.+++...... ...+++..+..++.|+++||+|||+. +|+||||||+||+++. ++.++++||-
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKH---GVMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999985 888888654322 23579999999999999999999999 9999999999999999 8899999985
No 296
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.85 E-value=5.1e-21 Score=185.34 Aligned_cols=138 Identities=22% Similarity=0.339 Sum_probs=113.4
Q ss_pred CCccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCceEEEeecC
Q 013258 300 KNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVYPYM 374 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~ 374 (447)
.+.||+|+||+||+|+.. +++.||+|.++... ....+.+|+++++.++||||+++++++.. ....+++|||+
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~ 82 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYA 82 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC---CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEecc
Confidence 367999999999999854 46789999986432 23457899999999999999999998854 45678999998
Q ss_pred CCCChhhHhhccCC-----CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee----CCCCceeecccc
Q 013258 375 TNGSVASRLRERQS-----SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~-----~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~~i~df~ 444 (447)
. ++|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+||.
T Consensus 83 ~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07868 83 E-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred C-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence 6 588887754321 122478888999999999999999999 99999999999999 456789999995
No 297
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.85 E-value=4.8e-21 Score=181.90 Aligned_cols=137 Identities=28% Similarity=0.395 Sum_probs=119.7
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||+||++... +|+.||+|.+..... ......+.+|+++++.++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999854 589999999864321 22234577899999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++..... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.++++||-
T Consensus 81 ~~~l~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~Nil~~~~~~~~l~dfg 140 (277)
T cd05577 81 KYHIYNVGE--PGFPEARAIFYAAQIICGLEHLHQR---RIVYRDLKPENVLLDDHGNVRISDLG 140 (277)
T ss_pred HHHHHHcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEECCCCCEEEccCc
Confidence 999876532 2488999999999999999999998 99999999999999999999999984
No 298
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.85 E-value=7e-21 Score=180.11 Aligned_cols=145 Identities=27% Similarity=0.400 Sum_probs=119.4
Q ss_pred CCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013258 297 FSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 365 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 365 (447)
|.+.+.||+|+||.||+|.+. +++.||||.++.... .....++.+|+++++.++||||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 456788999999999999853 368899999865432 223446889999999999999999999886532
Q ss_pred ceEEEeecCCCCChhhHhhccC--CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
..++++||+.+|+|.+++.... .....+++.....++.|++.||+|||+. +|+||||||+||++++++.+|++||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSK---NFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CEeecccchhhEEEcCCCCEEECcc
Confidence 2478899999999998875422 1122478889999999999999999998 9999999999999999999999998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 158 g 158 (273)
T cd05074 158 G 158 (273)
T ss_pred c
Confidence 4
No 299
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.85 E-value=2.6e-21 Score=186.03 Aligned_cols=139 Identities=27% Similarity=0.360 Sum_probs=118.1
Q ss_pred CCccccCCCceEEEEEe-CCCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
.++||+|-||+||-|.. ++|+.||||++.+.. ....+.++.+|+++|..++||.||.+.--|++++..+.|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 38899999999999985 469999999996544 33445679999999999999999999999999999999999995 5
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~ 444 (447)
+..+.+-... ...+++..-..++.||+.||.|||.+ +|+|+||||+|||+.+.. ++|++||-
T Consensus 648 DMLEMILSsE--kgRL~er~TkFlvtQIL~ALr~LH~k---nIvHCDLKPENVLLas~~~FPQvKlCDFG 712 (888)
T KOG4236|consen 648 DMLEMILSSE--KGRLPERITKFLVTQILVALRYLHFK---NIVHCDLKPENVLLASASPFPQVKLCDFG 712 (888)
T ss_pred hHHHHHHHhh--cccchHHHHHHHHHHHHHHHHHhhhc---ceeeccCCchheeeccCCCCCceeecccc
Confidence 6666554432 23488888889999999999999999 999999999999998653 78999994
No 300
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.85 E-value=5.8e-21 Score=180.51 Aligned_cols=147 Identities=32% Similarity=0.440 Sum_probs=127.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC-----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT----- 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~----- 365 (447)
.+++|+..+.||+|+||.||+|... +++.+++|.++... ....++.+|+.+++++ +|+||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE--DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc--hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 4678999999999999999999975 57899999986442 2345689999999998 7999999999987644
Q ss_pred -ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+++++|.+++.........+++..+..++.|++.||.|||+. +++|+||+|+||++++++.++++||-
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~---~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHEN---KVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEEccCCeEEECCCc
Confidence 48999999999999999876432234588999999999999999999999 99999999999999999999999984
No 301
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.85 E-value=5.1e-21 Score=182.04 Aligned_cols=136 Identities=29% Similarity=0.361 Sum_probs=113.8
Q ss_pred ccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHH---hcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 302 ILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKII---SMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l---~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
.||+|+||.||++... +++.+|+|.+....... ....+.+|..++ ...+||||+++++++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999964 58999999886543221 122344454433 34479999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||.
T Consensus 81 ~~~L~~~i~~~~----~l~~~~~~~i~~qi~~al~~lH~~---~ivH~dikp~Nil~~~~~~~~l~dfg 142 (279)
T cd05633 81 GGDLHYHLSQHG----VFSEKEMRFYATEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (279)
T ss_pred CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCCCCCCHHHEEECCCCCEEEccCC
Confidence 999999987643 389999999999999999999999 99999999999999999999999986
No 302
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.85 E-value=2.6e-21 Score=185.32 Aligned_cols=136 Identities=26% Similarity=0.362 Sum_probs=120.3
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
...||+|+||.||++... ++..||||.+.... ......+.+|+..++.++|+||+++++.+...+..++||||+++++
T Consensus 27 ~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 27 FIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhcccCCCCeEEEEEEECCCCCEEEEEEEecch-HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 466999999999999864 58899999885432 2234468899999999999999999999999999999999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.+++... .+++.....++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 106 L~~~~~~~-----~l~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nill~~~~~~kL~dfg 163 (292)
T cd06658 106 LTDIVTHT-----RMNEEQIATVCLSVLRALSYLHNQ---GVIHRDIKSDSILLTSDGRIKLSDFG 163 (292)
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEcCCCCEEEccCc
Confidence 99987542 278899999999999999999999 99999999999999999999999985
No 303
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.85 E-value=6e-21 Score=178.84 Aligned_cols=144 Identities=22% Similarity=0.322 Sum_probs=123.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC-CceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-TEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 372 (447)
+|+..+.||+|++|.||++... +++.||+|.+..... ......+.+|++++++++|+|++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4778899999999999999864 578999999864332 22334688999999999999999999887644 45789999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++..... ..+++.++..++.|++.|++|||+. +|+||||||+||++++++.++++||-
T Consensus 81 ~~~~~~l~~~l~~~~~--~~l~~~~~~~~~~~l~~~l~~lH~~---~i~H~di~p~nil~~~~~~~~l~df~ 147 (257)
T cd08223 81 FCEGGDLYHKLKEQKG--KLLPENQVVEWFVQIAMALQYLHEK---HILHRDLKTQNVFLTRTNIIKVGDLG 147 (257)
T ss_pred ccCCCcHHHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCchhEEEecCCcEEEeccc
Confidence 9999999999976422 2478999999999999999999999 99999999999999999999999985
No 304
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.85 E-value=4.5e-21 Score=186.75 Aligned_cols=139 Identities=29% Similarity=0.408 Sum_probs=119.7
Q ss_pred CccccC--CCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRG--GFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+| +||+||+++.. +|+.||+|.+...... .....+.+|+.+++.++||||+++++++...+..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 456766 89999999864 6999999998654322 2234688999999999999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++..++.||.
T Consensus 84 ~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~aL~~lH~~---~ivHrDlkp~Nill~~~~~~~~~~~~ 146 (328)
T cd08226 84 GSANSLLKTYFP--EGMSEALIGNILFGALRGLNYLHQN---GYIHRNIKASHILISGDGLVSLSGLS 146 (328)
T ss_pred CCHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEeCCCcEEEechH
Confidence 999999876432 2378889999999999999999998 99999999999999999999999873
No 305
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.85 E-value=3.7e-22 Score=181.73 Aligned_cols=145 Identities=28% Similarity=0.344 Sum_probs=126.9
Q ss_pred HhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
..++|+..++||+|.||+|..++ ..+++.+|+|+++++..-.. ..--..|-++|...+||.+..|.-.++..+.+++
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 34678888999999999999998 45799999999987643221 1235678999999999999999988999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||..||.|+-+|...+ .+++.....+...|..||.|||++ +||.||+|.+|.|+|.||.+||+||-
T Consensus 246 VMeyanGGeLf~HLsrer----~FsE~RtRFYGaEIvsAL~YLHs~---~ivYRDlKLENLlLDkDGHIKitDFG 313 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRER----VFSEDRTRFYGAEIVSALGYLHSR---NIVYRDLKLENLLLDKDGHIKITDFG 313 (516)
T ss_pred EEEEccCceEeeehhhhh----cccchhhhhhhHHHHHHhhhhhhC---CeeeeechhhhheeccCCceEeeecc
Confidence 999999999999887643 388888889999999999999999 99999999999999999999999994
No 306
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.85 E-value=6.4e-21 Score=180.06 Aligned_cols=147 Identities=24% Similarity=0.340 Sum_probs=122.6
Q ss_pred CCCCCCccccCCCceEEEEEeCC--CcEEEEEEcccccc---------cccHHHHHHHHHHHhc-CCCCCccceeeEEec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRLKEERT---------SGGELQFQTEVKIISM-AVHRNLLRLYGFCTT 363 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 363 (447)
+|+..+.||+|+||.||+|.... ++.+|+|.+..... .....++.+|+.++.+ ++||||+++++++..
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778999999999999999654 68899998853221 1122357778888764 799999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
.+..+++|||+++++|.+++.........+++..+..++.|++.||.|||+ . +++||||||+||++++++.++++|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEK---RIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCC---ceeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999886532233358888999999999999999996 5 799999999999999999999999
Q ss_pred ccc
Q 013258 443 ILR 445 (447)
Q Consensus 443 f~~ 445 (447)
|..
T Consensus 158 fg~ 160 (269)
T cd08528 158 FGL 160 (269)
T ss_pred ccc
Confidence 963
No 307
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.85 E-value=5.5e-21 Score=183.65 Aligned_cols=146 Identities=28% Similarity=0.436 Sum_probs=124.2
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC----
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT---- 365 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~---- 365 (447)
...++|++.+.||+|+||.||+|... +++.||+|.++.... ......+.+|+++++.++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34577889999999999999999975 588999999865432 222346788999999999999999999987654
Q ss_pred ------ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 366 ------EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 366 ------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
..++|+||+++ ++...+.... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGL---VHFSEDHIKSFMKQLLEGLNYCHKK---NFLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCcEE
Confidence 78999999976 7777766532 2489999999999999999999999 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
++||-
T Consensus 157 l~dfg 161 (302)
T cd07864 157 LADFG 161 (302)
T ss_pred eCccc
Confidence 99984
No 308
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.85 E-value=3.1e-21 Score=172.17 Aligned_cols=136 Identities=16% Similarity=0.225 Sum_probs=104.6
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccH--------HH-----------------HHHHHHHHhcCCCCCc
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE--------LQ-----------------FQTEVKIISMAVHRNL 354 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--------~~-----------------~~~E~~~l~~l~H~ni 354 (447)
...||+|+||.||+|...+|+.||||+++........ .+ ...|++.+..+.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999878999999999754321100 11 2349999999988887
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhh-hcCCCCCeeecCCCCCceeeC
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL-HEHCDPKIIHRDVKAANILLD 433 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NILl~ 433 (447)
.....+.. ...++||||++++++....... ..+++.....++.|++.+|.|+ |+. +|+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~----~~~~~~~~~~i~~qi~~~L~~l~H~~---giiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD----APLSESKARELYLQVIQIMRILYQDC---RLVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc----CCCCHHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEE
Confidence 54433322 2348999999988776543222 1378889999999999999999 677 999999999999998
Q ss_pred CCCceeeccccc
Q 013258 434 EDADQSSKTILR 445 (447)
Q Consensus 434 ~~~~~~i~df~~ 445 (447)
++.+++.||-.
T Consensus 153 -~~~v~LiDFG~ 163 (190)
T cd05147 153 -DGKLYIIDVSQ 163 (190)
T ss_pred -CCcEEEEEccc
Confidence 47899999964
No 309
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.85 E-value=8.7e-21 Score=180.95 Aligned_cols=144 Identities=27% Similarity=0.433 Sum_probs=128.8
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++.|+..+.||+|+||.||+|... +++.+++|.++.... ....+.+|++.++.++|+|++++++++...+..++++
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ--NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch--hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 4456777889999999999999976 588999999865432 3456889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+|+||||+||+++.++.++|+||.
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~---gi~H~dl~p~ni~i~~~~~~~l~d~~ 161 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQ---NVIHRDIKSDNILLSKDGSVKLADFG 161 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCChhhEEEcCCCCEEECccc
Confidence 9999999999998754 2489999999999999999999998 99999999999999999999999984
No 310
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.85 E-value=4.1e-21 Score=180.45 Aligned_cols=135 Identities=28% Similarity=0.401 Sum_probs=120.2
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||.||+++.. +++.+++|.++..... .....+.+|++++.+++||||+++++.+...+..++++||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 4899999998654321 2344688999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++.... .+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++||-
T Consensus 81 ~~~l~~~~----~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~di~~~nil~~~~~~~~l~dfg 138 (265)
T cd05579 81 ASLLENVG----SLDEDVARIYIAEIVLALEYLHSN---GIIHRDLKPDNILIDSNGHLKLTDFG 138 (265)
T ss_pred HHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHc---CeecCCCCHHHeEEcCCCCEEEEecc
Confidence 99997643 388999999999999999999998 99999999999999999999999984
No 311
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.85 E-value=6e-21 Score=182.89 Aligned_cols=141 Identities=23% Similarity=0.364 Sum_probs=125.3
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||++.. .+++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++|+||
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQ-QPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEecccc-chHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 5788889999999999999985 468899999985432 22344688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++... .+++..+..++.|++.||.|||+. +++||||||+||++++++.++|+||-
T Consensus 98 ~~~~~L~~~~~~~-----~l~~~~~~~i~~~l~~al~~LH~~---gi~H~dL~p~Nili~~~~~~kL~dfg 160 (293)
T cd06647 98 LAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 160 (293)
T ss_pred CCCCcHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CEeeccCCHHHEEEcCCCCEEEccCc
Confidence 9999999998653 278899999999999999999999 99999999999999999999999985
No 312
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.85 E-value=3.8e-21 Score=187.93 Aligned_cols=142 Identities=21% Similarity=0.336 Sum_probs=121.7
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 367 (447)
.++|++.+.||+|+||.||+|+. .+|+.||+|.++..........+.+|+.+++.++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 46788999999999999999985 468999999986543333345688999999999999999999987654 357
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+. +++.+.+... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||-
T Consensus 84 ~lv~e~~~-~~l~~~~~~~-----~l~~~~~~~i~~ql~~aL~~LH~~---~ivH~dlkp~Nill~~~~~~kl~dfg 151 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ-----HLSNDHIQYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTNCDLKICDFG 151 (336)
T ss_pred EEEehhcc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEECCCCCEEECccc
Confidence 99999997 4888777543 388999999999999999999999 99999999999999999999999985
No 313
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.85 E-value=5e-21 Score=183.84 Aligned_cols=136 Identities=24% Similarity=0.333 Sum_probs=120.6
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
...||+|+||.||++... +++.||+|.+.... ......+.+|+.++..++||||+++++++...+..++++||+++++
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~ 104 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGA 104 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecc-cchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCC
Confidence 357999999999999864 68999999985432 2334568899999999999999999999999999999999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.+++... .+++..+..++.|++.||+|||+. +++||||||+||++++++.++|+||.
T Consensus 105 L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~dl~p~Nill~~~~~~kL~dfg 162 (297)
T cd06659 105 LTDIVSQT-----RLNEEQIATVCESVLQALCYLHSQ---GVIHRDIKSDSILLTLDGRVKLSDFG 162 (297)
T ss_pred HHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHeEEccCCcEEEeech
Confidence 99887542 378999999999999999999999 99999999999999999999999985
No 314
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.85 E-value=5.4e-21 Score=181.92 Aligned_cols=152 Identities=30% Similarity=0.463 Sum_probs=128.4
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
++.++....+.|+..+.||+|+||.||+|+. .+++.+|+|.+.... ....++..|+.++.++ +|+||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~--~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE--DEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh--HHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 4555556678899999999999999999996 458899999875432 2334688899999888 69999999998853
Q ss_pred ------CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 364 ------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 364 ------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
.+..+++|||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTKG--NALKEDWIAYICREILRGLAHLHAH---KVIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCC
Confidence 4567999999999999999876432 2377888899999999999999999 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
++++||.
T Consensus 160 ~~l~dfg 166 (282)
T cd06636 160 VKLVDFG 166 (282)
T ss_pred EEEeeCc
Confidence 9999984
No 315
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.85 E-value=9.2e-21 Score=183.24 Aligned_cols=145 Identities=23% Similarity=0.372 Sum_probs=121.5
Q ss_pred CCCCCCccccCCCceEEEEEeC---CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA---DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~ 368 (447)
+|+..+.||+|+||.||+|+.. +++.||+|.+.... .......+.+|+.++..++||||+++++++... +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 3677788999999999999964 47899999987532 122234678899999999999999999999887 7899
Q ss_pred EEeecCCCCChhhHhhccCCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC----CCceeeccc
Q 013258 369 LVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE----DADQSSKTI 443 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~----~~~~~i~df 443 (447)
+||||+++ ++.+.+...... ...+++.....++.|++.||+|||+. +|+||||||+||++++ ++.+|++||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSN---WVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999975 777776543222 22578889999999999999999999 9999999999999999 899999998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 157 g 157 (316)
T cd07842 157 G 157 (316)
T ss_pred c
Confidence 5
No 316
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.85 E-value=5e-21 Score=182.50 Aligned_cols=142 Identities=25% Similarity=0.341 Sum_probs=123.4
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||+|... +++.||+|.++.... ......+.+|+++++.++|+||+++++++...+..+++|||
T Consensus 2 ~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 81 (288)
T cd07833 2 KYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEY 81 (288)
T ss_pred ceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEec
Confidence 5778899999999999999965 588999999865432 22345689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++.+..+..... .+++.....++.|++.||+|||+. +++||||||+||++++++.+|++||.
T Consensus 82 ~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~~~ni~~~~~~~~kl~d~g 145 (288)
T cd07833 82 VERTLLELLEASPG----GLPPDAVRSYIWQLLQAIAYCHSH---NIIHRDIKPENILVSESGVLKLCDFG 145 (288)
T ss_pred CCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEEeee
Confidence 99877766554322 378899999999999999999999 99999999999999999999999985
No 317
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.85 E-value=9e-21 Score=177.47 Aligned_cols=144 Identities=28% Similarity=0.398 Sum_probs=124.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||++... +++.+|+|.+.... .......+.+|++++++++||||+++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4777899999999999999864 58899999986432 222344688999999999999999999999989999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
+++++|.+++..... ..+++..+..++.|+++||+|||++ +++||||||+||++++++ .+|++||-
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lh~~---~i~h~dl~~~nil~~~~~~~~~l~d~~ 147 (256)
T cd08220 81 APGGTLAEYIQKRCN--SLLDEDTILHFFVQILLALHHVHTK---LILHRDLKTQNILLDKHKMVVKIGDFG 147 (256)
T ss_pred CCCCCHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEEccCC
Confidence 999999999976432 3478899999999999999999999 999999999999998654 57999985
No 318
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.85 E-value=1e-20 Score=182.49 Aligned_cols=143 Identities=30% Similarity=0.431 Sum_probs=123.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+.|+..+.||+|+||.||+|+.. +++.||+|.+...... ....++.+|+++++.++||||+++.+++...+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45777899999999999999864 5899999988543222 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+. |++.+.+..... .+++..+..++.|++.||.|||+. +|+||||+|+||++++++.++++||.
T Consensus 95 e~~~-g~l~~~~~~~~~---~l~~~~~~~~~~ql~~~L~~LH~~---~i~H~dl~p~nIl~~~~~~~kL~dfg 160 (307)
T cd06607 95 EYCL-GSASDILEVHKK---PLQEVEIAAICHGALQGLAYLHSH---ERIHRDIKAGNILLTEPGTVKLADFG 160 (307)
T ss_pred HhhC-CCHHHHHHHccc---CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEECCCCCEEEeecC
Confidence 9997 577777654322 388999999999999999999998 99999999999999999999999985
No 319
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.85 E-value=9.5e-21 Score=178.18 Aligned_cols=135 Identities=26% Similarity=0.360 Sum_probs=119.9
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||.||+++.. +++.+|+|.+...... .....+.+|+++++.++||||+++++++..++..++++||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999965 4899999998643322 2345689999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++.... .+++..+..++.|+++||+|||+. +++|+||||+||++++++.++++||.
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~~~h~dl~~~nilv~~~~~~~l~df~ 138 (262)
T cd05572 81 WTILRDRG----LFDEYTARFYIACVVLAFEYLHNR---GIIYRDLKPENLLLDSNGYVKLVDFG 138 (262)
T ss_pred HHHHhhcC----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEEcCCCCEEEeeCC
Confidence 99997643 278889999999999999999998 99999999999999999999999985
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.85 E-value=1.4e-20 Score=175.92 Aligned_cols=146 Identities=26% Similarity=0.393 Sum_probs=128.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||++... +++.+++|.+...... ....++.+|+++++.++|||++++.+.+...+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4677889999999999999965 5889999998654322 3345688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+.+.........+++.....++.+++.||+|||+. +++|+||+|+||++++++.++++||-
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~---~~~H~dl~~~nil~~~~~~~~l~d~~ 148 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSR---KILHRDIKPQNIFLTSNGLVKLGDFG 148 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHHeEEcCCCcEEECCcc
Confidence 999999999987532234589999999999999999999999 99999999999999999999999984
No 321
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.84 E-value=1.8e-21 Score=191.63 Aligned_cols=140 Identities=26% Similarity=0.432 Sum_probs=119.3
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEccc---ccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc--eEEEeec
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKE---ERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE--KLLVYPY 373 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~---~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~--~~lv~e~ 373 (447)
.++||+|+|-+||||... +|..||.-.++. ........+|..|+++|+.|+|||||+++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 478999999999999864 477887554432 2223334679999999999999999999999987665 7799999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~ 444 (447)
|..|+|..++.+.+. ++......+++||++||.|||++ .|+|||||||-+||+|+.+ |++||+|+.
T Consensus 125 ~TSGtLr~Y~kk~~~----vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLG 191 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR----VNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLG 191 (632)
T ss_pred ccCCcHHHHHHHhcc----CCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchh
Confidence 999999999988754 77888999999999999999998 8899999999999999965 799999973
No 322
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.84 E-value=1.1e-20 Score=179.45 Aligned_cols=140 Identities=24% Similarity=0.322 Sum_probs=119.3
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecC--CceEEEee
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTV--TEKLLVYP 372 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~--~~~~lv~e 372 (447)
|+..+.||+|+||.||+|+.. +++.||+|.++............+|+..+.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 456788999999999999854 689999999875433333334567888888885 99999999999887 88999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++ |++.+.+.... ..++|..+..++.|++.||+|||+. +|+||||||+||++++ +.+||+||-
T Consensus 81 ~~~-~~l~~~l~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~---~i~H~dl~p~ni~l~~-~~~kl~dfg 144 (282)
T cd07831 81 LMD-MNLYELIKGRK---RPLPEKRVKSYMYQLLKSLDHMHRN---GIFHRDIKPENILIKD-DILKLADFG 144 (282)
T ss_pred cCC-ccHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEcC-CCeEEEecc
Confidence 997 58888887543 2489999999999999999999999 9999999999999999 999999984
No 323
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.84 E-value=8.5e-21 Score=177.75 Aligned_cols=144 Identities=19% Similarity=0.350 Sum_probs=124.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|+||.||++... +|..+|+|.+...... .....+.+|+++++.++|+||+++++.+...+..++++||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4677789999999999999965 5889999998653221 2334688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
+++++|.+++..... ..+++..+..++.|+++||+|||+. +++|+||||+||++++++ .++++||-
T Consensus 81 ~~~~~L~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~---~i~H~dl~~~nil~~~~~~~~~l~d~~ 147 (257)
T cd08225 81 CDGGDLMKRINRQRG--VLFSEDQILSWFVQISLGLKHIHDR---KILHRDIKSQNIFLSKNGMVAKLGDFG 147 (257)
T ss_pred CCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEcCCCCeEEecccc
Confidence 999999999876432 2478999999999999999999998 999999999999999886 46999984
No 324
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.84 E-value=2e-20 Score=174.74 Aligned_cols=142 Identities=29% Similarity=0.472 Sum_probs=125.9
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|+..+.||+|++|.||+++.. +++.||+|.+...... .....+.+|++++.+++|||++++++++......++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4677899999999999999865 5789999998654322 2334689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.... .+++..+..++.|++.||.|||+. +|+||||||+||++++++.++++||-
T Consensus 81 ~~~~~L~~~~~~~~----~l~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~ni~i~~~~~~~l~d~~ 144 (254)
T cd06627 81 AENGSLRQIIKKFG----PFPESLVAVYVYQVLQGLAYLHEQ---GVIHRDIKAANILTTKDGVVKLADFG 144 (254)
T ss_pred CCCCcHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCHHHEEECCCCCEEEeccc
Confidence 99999999987652 489999999999999999999999 99999999999999999999999984
No 325
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.84 E-value=1.1e-20 Score=182.35 Aligned_cols=144 Identities=28% Similarity=0.433 Sum_probs=122.8
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 369 (447)
.++|+..+.||+|+||.||+|... +|+.||+|.++...... ....+.+|++++.+++|+||+++++++... +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 357888999999999999999964 58999999986443222 223567899999999999999999998754 46899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+. ++|.+++.... ..+++..+..++.|+++||+|||+. +++||||||+||++++++.+|++||-
T Consensus 86 v~e~~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~kL~dfg 153 (309)
T cd07845 86 VMEYCE-QDLASLLDNMP---TPFSESQVKCLMLQLLRGLQYLHEN---FIIHRDLKVSNLLLTDKGCLKIADFG 153 (309)
T ss_pred EEecCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECccc
Confidence 999997 48888886542 2489999999999999999999999 99999999999999999999999985
No 326
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.84 E-value=9.1e-21 Score=180.31 Aligned_cols=142 Identities=28% Similarity=0.432 Sum_probs=123.4
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|++.+.||+|++|+||+|+.. +++.|+||++.............+|+..+.+++ |+||+++++++...+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 556788999999999999975 478999999865433333334667999999999 999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+|.+.+..... ..+++..+..++.|++.||.|||+. +++|+||||+||++++++.++++||-
T Consensus 81 -~~~l~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~Lh~~---~i~H~dl~~~ni~i~~~~~~~l~d~~ 144 (283)
T cd07830 81 -EGNLYQLMKDRKG--KPFSESVIRSIIYQILQGLAHIHKH---GFFHRDLKPENLLVSGPEVVKIADFG 144 (283)
T ss_pred -CCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCCEEEeecc
Confidence 8899998876531 2479999999999999999999998 99999999999999999999999984
No 327
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.84 E-value=1e-20 Score=185.65 Aligned_cols=151 Identities=23% Similarity=0.304 Sum_probs=126.4
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCT 362 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 362 (447)
...+++...+++|+..+.||+|+||.||+|.. .+++.||+|+++.... ......+.+|+.++.+++||||+++++++.
T Consensus 7 ~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~ 86 (345)
T cd07877 7 ELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFT 86 (345)
T ss_pred hHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeee
Confidence 34556677889999999999999999999985 4689999999864321 222346788999999999999999999875
Q ss_pred cC------CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 363 TV------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 363 ~~------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
.. ...+++++++ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++
T Consensus 87 ~~~~~~~~~~~~lv~~~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIll~~~~ 157 (345)
T cd07877 87 PARSLEEFNDVYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDC 157 (345)
T ss_pred ecccccccccEEEEehhc-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChHHEEEcCCC
Confidence 43 3467888876 78998887543 288999999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+|++||-
T Consensus 158 ~~kl~dfg 165 (345)
T cd07877 158 ELKILDFG 165 (345)
T ss_pred CEEEeccc
Confidence 99999984
No 328
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.84 E-value=1.2e-20 Score=181.93 Aligned_cols=144 Identities=29% Similarity=0.471 Sum_probs=121.5
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 365 (447)
.++|+..+.||+|+||.||+|+.. +++.||||.+...... .....+.+|++++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 356888899999999999999965 5899999988643322 22335678999999999999999999987654
Q ss_pred --ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 366 --EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 366 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
..++||||+. ++|.+.+.... ..+++.....++.|++.||+|||+. +++||||||+||++++++.+|++||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKN---VKFTLSEIKKVMKMLLNGLYYIHRN---KILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEECCCCcEEECcC
Confidence 3499999996 48888876542 2488999999999999999999999 9999999999999999999999998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
.
T Consensus 164 g 164 (310)
T cd07865 164 G 164 (310)
T ss_pred C
Confidence 5
No 329
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.84 E-value=1.1e-20 Score=185.31 Aligned_cols=143 Identities=23% Similarity=0.360 Sum_probs=121.8
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----- 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----- 365 (447)
..++|+..+.||+|+||.||++.. .+++.||||++..... ......+.+|+++++.++||||+++++++....
T Consensus 13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 456799999999999999999985 4689999999854322 222345889999999999999999999887543
Q ss_pred -ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||-
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~~~-----~l~~~~~~~i~~qi~~al~~LH~~---gi~H~dlkp~Nill~~~~~~kl~dfg 163 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMKHE-----KLSEDRIQFLVYQMLKGLKYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 163 (343)
T ss_pred ceEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 358999999 77898887542 388999999999999999999998 99999999999999999999999985
No 330
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.84 E-value=7.6e-21 Score=180.31 Aligned_cols=143 Identities=27% Similarity=0.371 Sum_probs=126.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 370 (447)
++|...+.||+|+||.||+++.. +++.||+|++..... ......+.+|++++.+++ ||||+++++++...+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 36788899999999999999965 689999999865321 122346889999999998 99999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.+++.... .+++.....++.|++.||.|||+. +++|+||||+||++++++.++++||-
T Consensus 81 ~e~~~~~~L~~~l~~~~----~l~~~~~~~i~~ql~~~l~~Lh~~---~~~H~dl~~~ni~i~~~~~~~l~df~ 147 (280)
T cd05581 81 LEYAPNGELLQYIRKYG----SLDEKCTRFYAAEILLALEYLHSK---GIIHRDLKPENILLDKDMHIKITDFG 147 (280)
T ss_pred EcCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHeEECCCCCEEecCCc
Confidence 99999999999997653 489999999999999999999998 99999999999999999999999985
No 331
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.84 E-value=1.5e-20 Score=178.90 Aligned_cols=141 Identities=28% Similarity=0.467 Sum_probs=122.6
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEEee
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVYP 372 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~e 372 (447)
|++.+.||+|+||.||+|+.. +++.+|+|.++... .......+.+|+++++.++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 556788999999999999965 48899999997553 222334688999999999999999999999887 78999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++ +|.+++.... ..+++..+..++.|++.||+|||+. +++|+||||+||++++++.++++||-
T Consensus 81 ~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~i~~al~~LH~~---~~~h~dl~p~nil~~~~~~~~l~d~g 145 (287)
T cd07840 81 YMDH-DLTGLLDSPE---VKFTESQIKCYMKQLLEGLQYLHSN---GILHRDIKGSNILINNDGVLKLADFG 145 (287)
T ss_pred cccc-cHHHHHhccC---CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEEcCCCCEEEcccc
Confidence 9974 8888886542 2488999999999999999999998 99999999999999999999999984
No 332
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.84 E-value=9.7e-21 Score=177.14 Aligned_cols=146 Identities=25% Similarity=0.348 Sum_probs=127.0
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|++.+.||+|+||.||+++.. +++.+|+|.+..... .....++.+|+++++.++|+||+++++++......++|+||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4677889999999999999854 688999999865332 22344688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++.........+++..+..++.|++.||+|||+. +++|+||||+||++++++.+|++||-
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~---~i~h~~l~~~ni~~~~~~~~kl~d~g 148 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQ---KILHRDLKSANILLVANDLVKIGDLG 148 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhC---CcccCCCCcceEEEecCCcEEEeecc
Confidence 999999999877433334588999999999999999999999 99999999999999999999999984
No 333
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.84 E-value=1.8e-21 Score=203.56 Aligned_cols=145 Identities=26% Similarity=0.385 Sum_probs=117.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-------- 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 364 (447)
..+|+..++||+||||.||+++.+ ||+.||||+|+-.........+.+|+.++++++|||||+++..+.+.
T Consensus 478 ~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~e 557 (1351)
T KOG1035|consen 478 LNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLE 557 (1351)
T ss_pred hhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccccc
Confidence 356888899999999999999954 89999999997654344445689999999999999999998654210
Q ss_pred --------------------------------------------------------------------------------
Q 013258 365 -------------------------------------------------------------------------------- 364 (447)
Q Consensus 365 -------------------------------------------------------------------------------- 364 (447)
T Consensus 558 i~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e 637 (1351)
T KOG1035|consen 558 IVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSE 637 (1351)
T ss_pred ccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccC
Confidence
Q ss_pred -------------------------------CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 013258 365 -------------------------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 413 (447)
Q Consensus 365 -------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH 413 (447)
..+|+-||||+.-.+.++++...... .-....+++++|++||.|+|
T Consensus 638 ~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~---~~d~~wrLFreIlEGLaYIH 714 (1351)
T KOG1035|consen 638 GSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNS---QRDEAWRLFREILEGLAYIH 714 (1351)
T ss_pred CccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccch---hhHHHHHHHHHHHHHHHHHH
Confidence 01367788888877777776543210 23457789999999999999
Q ss_pred cCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 414 EHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 414 ~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++ +||||||||.||++|+++++||+||-
T Consensus 715 ~~---giIHRDLKP~NIFLd~~~~VKIGDFG 742 (1351)
T KOG1035|consen 715 DQ---GIIHRDLKPRNIFLDSRNSVKIGDFG 742 (1351)
T ss_pred hC---ceeeccCCcceeEEcCCCCeeecccc
Confidence 99 99999999999999999999999994
No 334
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.84 E-value=2e-20 Score=181.06 Aligned_cols=137 Identities=23% Similarity=0.352 Sum_probs=112.5
Q ss_pred CccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCceEEEeecCC
Q 013258 301 NILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLLVYPYMT 375 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~lv~e~~~ 375 (447)
..||+|+||+||+|+.. ++..||+|.++... ....+.+|+++++.++||||+++++++.. ....++|+||+.
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG---ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCC---CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 57999999999999864 35789999886432 23467899999999999999999998854 456789999987
Q ss_pred CCChhhHhhccC-----CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee----CCCCceeecccc
Q 013258 376 NGSVASRLRERQ-----SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~~i~df~ 444 (447)
+ +|.+++.... .....+++..+..++.|++.||.|||+. +|+||||||+|||+ ++++.+||+||.
T Consensus 84 ~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG 157 (317)
T cd07867 84 H-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKIADMG 157 (317)
T ss_pred C-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhC---CEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence 4 7877775321 1122478888999999999999999999 99999999999999 566789999984
No 335
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.84 E-value=2.4e-20 Score=177.30 Aligned_cols=136 Identities=29% Similarity=0.364 Sum_probs=113.3
Q ss_pred ccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHH---HHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 302 ILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVK---IISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~---~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
+||+|+||.||+++.. +++.||+|.+....... ....+..|.. .++...||||+++.+++...+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 58899999986432221 1122334433 4445679999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||-
T Consensus 81 g~~L~~~l~~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~di~p~nili~~~~~~kl~dfg 142 (278)
T cd05606 81 GGDLHYHLSQHG----VFSEAEMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 142 (278)
T ss_pred CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEcCCCCHHHEEECCCCCEEEccCc
Confidence 999998886542 489999999999999999999998 99999999999999999999999985
No 336
>PTZ00284 protein kinase; Provisional
Probab=99.84 E-value=5.9e-21 Score=194.86 Aligned_cols=145 Identities=19% Similarity=0.314 Sum_probs=116.0
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCC------CCccceeeEEe
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH------RNLLRLYGFCT 362 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H------~niv~l~~~~~ 362 (447)
+...+++|++.+.||+|+||+||+|+.. +++.||||+++... ....++..|++++..++| .+++++++++.
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~ 201 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP--KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ 201 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch--hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence 3445678999999999999999999864 58899999986432 122345566666666554 45888888887
Q ss_pred cC-CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCC----
Q 013258 363 TV-TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDA---- 436 (447)
Q Consensus 363 ~~-~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~---- 436 (447)
.. ...++|||++ +++|.+++.... .+++..+..|+.|++.||+|||+ . +||||||||+|||++.++
T Consensus 202 ~~~~~~~iv~~~~-g~~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~yLH~~~---gIiHrDlKP~NILl~~~~~~~~ 273 (467)
T PTZ00284 202 NETGHMCIVMPKY-GPCLLDWIMKHG----PFSHRHLAQIIFQTGVALDYFHTEL---HLMHTDLKPENILMETSDTVVD 273 (467)
T ss_pred cCCceEEEEEecc-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEEEecCCcccc
Confidence 64 4678999988 778988887643 38899999999999999999997 5 899999999999999776
Q ss_pred ------------ceeecccc
Q 013258 437 ------------DQSSKTIL 444 (447)
Q Consensus 437 ------------~~~i~df~ 444 (447)
.+||+||.
T Consensus 274 ~~~~~~~~~~~~~vkl~DfG 293 (467)
T PTZ00284 274 PVTNRALPPDPCRVRICDLG 293 (467)
T ss_pred cccccccCCCCceEEECCCC
Confidence 48999995
No 337
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.84 E-value=2.4e-21 Score=191.88 Aligned_cols=139 Identities=29% Similarity=0.427 Sum_probs=122.9
Q ss_pred CCccccCCCceEEEEEeCC--Cc--EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 300 KNILGRGGFGKVYKGRLAD--GK--LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~--~~--~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
.+.||+|.||.|++|.|.. |+ .||||.++.+.......+|.+|+.+|.+++|||+|+|||+..+ ....||+|.++
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELap 193 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELAP 193 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhcc
Confidence 4789999999999999753 44 6899999877655456689999999999999999999999887 67899999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.|||.+.|++.. ...+-......++.|||.||.||.++ ++|||||..+|+|+-....+||+||-
T Consensus 194 lGSLldrLrka~--~~~llv~~Lcdya~QiA~aM~YLesk---rlvHRDLAARNlllasprtVKI~DFG 257 (1039)
T KOG0199|consen 194 LGSLLDRLRKAK--KAILLVSRLCDYAMQIAKAMQYLESK---RLVHRDLAARNLLLASPRTVKICDFG 257 (1039)
T ss_pred cchHHHHHhhcc--ccceeHHHHHHHHHHHHHHHHHHhhh---hhhhhhhhhhhheecccceeeeeccc
Confidence 999999999832 23477788889999999999999999 99999999999999999999999994
No 338
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.84 E-value=9.6e-21 Score=184.92 Aligned_cols=142 Identities=23% Similarity=0.367 Sum_probs=121.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec----CCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~ 368 (447)
++|+..+.||+|+||.||+|... +++.||+|++..... ......+.+|+.++..++||||+++++++.. ....+
T Consensus 5 ~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 84 (334)
T cd07855 5 SRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDVY 84 (334)
T ss_pred hceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceEE
Confidence 67888899999999999999854 589999999865432 2233467889999999999999999998753 34679
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+. |+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||-
T Consensus 85 lv~e~~~-~~l~~~~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~dfg 152 (334)
T cd07855 85 VVMDLME-SDLHHIIHSDQ----PLTEEHIRYFLYQLLRGLKYIHSA---NVIHRDLKPSNLLVNEDCELRIGDFG 152 (334)
T ss_pred EEEehhh-hhHHHHhccCC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEecccc
Confidence 9999995 68988886542 388999999999999999999998 99999999999999999999999985
No 339
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.84 E-value=2.5e-20 Score=178.44 Aligned_cols=144 Identities=23% Similarity=0.402 Sum_probs=121.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|++|.||+|+.. +++.||+|.++..... .....+.+|+++++.++||||+++++++...+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 46788899999999999999965 6889999998644322 223468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
|++ ++|.+.+..... ..+++.....++.|++.||+|||++ +++||||||+||++++ ++.+|++||-
T Consensus 82 ~~~-~~l~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dl~p~nill~~~~~~~kl~dfg 148 (294)
T PLN00009 82 YLD-LDLKKHMDSSPD--FAKNPRLIKTYLYQILRGIAYCHSH---RVLHRDLKPQNLLIDRRTNALKLADFG 148 (294)
T ss_pred ccc-ccHHHHHHhCCC--CCcCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCcceEEEECCCCEEEEcccc
Confidence 996 588887765332 2357788889999999999999998 9999999999999986 4568999984
No 340
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.84 E-value=2.1e-20 Score=177.93 Aligned_cols=142 Identities=24% Similarity=0.434 Sum_probs=123.5
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|+..+.||+|++|.||+|... +|+.||+|+++...... ....+.+|+++++.++|||++++++++...+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999864 69999999986543222 2346889999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+ ++|.+++..... ..+++..+..++.|+++||+|||+. +++||||+|+||++++++.++++||-
T Consensus 81 ~-~~l~~~~~~~~~--~~~~~~~~~~~~~~i~~~L~~lH~~---~~~H~dl~p~nil~~~~~~~~l~df~ 144 (283)
T cd07835 81 D-LDLKKYMDSSPL--TGLDPPLIKSYLYQLLQGIAYCHSH---RVLHRDLKPQNLLIDREGALKLADFG 144 (283)
T ss_pred C-cCHHHHHhhCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCcEEEeecc
Confidence 5 689998876432 2489999999999999999999998 99999999999999999999999984
No 341
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.84 E-value=1.6e-20 Score=181.53 Aligned_cols=137 Identities=24% Similarity=0.232 Sum_probs=114.5
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEcccc-cccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChh
Q 013258 302 ILGRGGFGKVYKGRLADGKLVAVKRLKEE-RTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVA 380 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~ 380 (447)
.+|.|+++.||++.. +++.||||+++.. ........+.+|+++++.++|+||+++++++...+..+++|||+++|+|.
T Consensus 9 ~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~ 87 (314)
T cd08216 9 CFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCE 87 (314)
T ss_pred hhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHH
Confidence 344444444444444 6899999998654 22333457999999999999999999999999999999999999999999
Q ss_pred hHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 381 SRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 381 ~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++..... ..+++.....++.|+++||+|||+. +|+||||||+||+++.++.++++||.
T Consensus 88 ~~l~~~~~--~~~~~~~~~~~~~~l~~~L~~LH~~---~ivH~dlk~~Nili~~~~~~kl~d~~ 146 (314)
T cd08216 88 DLLKTHFP--EGLPELAIAFILKDVLNALDYIHSK---GFIHRSVKASHILLSGDGKVVLSGLR 146 (314)
T ss_pred HHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCcceEEEecCCceEEecCc
Confidence 99986422 2378888999999999999999999 99999999999999999999999985
No 342
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.84 E-value=4.1e-20 Score=171.98 Aligned_cols=142 Identities=33% Similarity=0.504 Sum_probs=126.8
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|+..+.||+|++|.||++... +++.+++|+++.... .....+.+|++.++.++|+|++++++++......++++||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 79 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFC 79 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecC
Confidence 4677789999999999999975 688999999865433 24457999999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|.+++.... ..+++..+..++.|++.||.|||.. +++||||+|+||++++++.++|.||-
T Consensus 80 ~~~~L~~~~~~~~---~~~~~~~~~~i~~~i~~~l~~lh~~---~i~h~dl~p~ni~i~~~~~~~l~d~~ 143 (253)
T cd05122 80 SGGSLKDLLKSTN---QTLTESQIAYVCKELLKGLEYLHSN---GIIHRDIKAANILLTSDGEVKLIDFG 143 (253)
T ss_pred CCCcHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHhhcC---CEecCCCCHHHEEEccCCeEEEeecc
Confidence 9999999987642 2489999999999999999999998 99999999999999999999999984
No 343
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.84 E-value=3.1e-20 Score=180.02 Aligned_cols=141 Identities=31% Similarity=0.457 Sum_probs=121.1
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||+|+||.||+++.. ++..+|+|.+...... .....+.+|+++++.++|||++++++++...+..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 556688999999999999964 5889999998643222 2234688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. |++.+.+.... ..++|..+..++.|++.||.|||+. +|+||||||+||+++.++.++++||.
T Consensus 107 ~~-g~l~~~~~~~~---~~l~~~~~~~i~~~i~~~l~~lH~~---~i~H~dL~p~Nil~~~~~~~kl~dfg 170 (317)
T cd06635 107 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFG 170 (317)
T ss_pred CC-CCHHHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcccEEECCCCCEEEecCC
Confidence 97 57877775432 2488999999999999999999998 99999999999999999999999984
No 344
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.83 E-value=3.4e-20 Score=176.89 Aligned_cols=139 Identities=24% Similarity=0.361 Sum_probs=122.4
Q ss_pred CCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|...+.||+|++|.||++.. .+++.+++|.++... ......+.+|+.+++.++||||+++++++...+..++++||++
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~-~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRK-QQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 44457899999999999985 468899999885432 2233468899999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|.+++... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++++||.
T Consensus 100 ~~~L~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~d~g 160 (285)
T cd06648 100 GGALTDIVTHT-----RMNEEQIATVCLAVLKALSFLHAQ---GVIHRDIKSDSILLTSDGRVKLSDFG 160 (285)
T ss_pred CCCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChhhEEEcCCCcEEEcccc
Confidence 99999998762 378899999999999999999999 99999999999999999999999984
No 345
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.83 E-value=2.8e-20 Score=174.81 Aligned_cols=137 Identities=25% Similarity=0.343 Sum_probs=115.1
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHH-hcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKII-SMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||.||+|... +++.||+|.++.... ......+..|..++ ...+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999864 588999999864321 11122344554443 456899999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|.+++.... .+++..+..++.|++.||.|||+. +++||||+|+||++++++.++++||.
T Consensus 82 ~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~i~H~dl~p~nil~~~~~~~~l~dfg 142 (260)
T cd05611 82 GDCASLIKTLG----GLPEDWAKQYIAEVVLGVEDLHQR---GIIHRDIKPENLLIDQTGHLKLTDFG 142 (260)
T ss_pred CCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCcEEEeecc
Confidence 99999997643 378899999999999999999998 99999999999999999999999984
No 346
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.83 E-value=1.6e-20 Score=179.22 Aligned_cols=142 Identities=27% Similarity=0.332 Sum_probs=122.2
Q ss_pred CCCCCCccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 296 GFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
+|+..+.||+|+||.||+++. .+++.||||.++.... ......+.+|++++.++ +||||+++++.+......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 366778999999999999874 2468899999864321 12234588999999999 599999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++.... .+++.....++.|+++||+|||+. +++||||||+||++++++.++++||-
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~ql~~~l~~lH~~---~~~H~dl~p~nil~~~~~~~~l~dfg 150 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE----HFTESEVRVYIAEIVLALDHLHQL---GIIYRDIKLENILLDSEGHVVLTDFG 150 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHeEECCCCCEEEEECc
Confidence 99999999999999987543 378899999999999999999998 99999999999999999999999984
No 347
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=7.5e-21 Score=188.11 Aligned_cols=138 Identities=28% Similarity=0.419 Sum_probs=120.2
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
-+||+|.||+||.|+.. +...+|||.+....+ ...+-+.+|+.+.+.++|.|||+++|.+.+.+...+.||.++||||
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekds-r~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSL 659 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDS-REVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSL 659 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccc-hhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcH
Confidence 46999999999999954 466789999966543 2334588999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCC--ChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeeccccc
Q 013258 380 ASRLRERQSSLPPL--DWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTILR 445 (447)
Q Consensus 380 ~~~l~~~~~~~~~l--~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~~ 445 (447)
.++|+..-+ ++ .+.+.-.+..||++||.|||++ .|||||||-+|||++- .|..||+||.-
T Consensus 660 SsLLrskWG---PlKDNEstm~fYtkQILeGLkYLHen---~IVHRDIKGDNVLvNTySGvlKISDFGT 722 (1226)
T KOG4279|consen 660 SSLLRSKWG---PLKDNESTMNFYTKQILEGLKYLHEN---KIVHRDIKGDNVLVNTYSGVLKISDFGT 722 (1226)
T ss_pred HHHHHhccC---CCccchhHHHHHHHHHHHHhhhhhhc---ceeeccccCCcEEEeeccceEEeccccc
Confidence 999987532 35 6778889999999999999999 9999999999999985 78999999963
No 348
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.83 E-value=3.4e-20 Score=173.26 Aligned_cols=142 Identities=32% Similarity=0.485 Sum_probs=126.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 371 (447)
+|+..+.||+|++|.||+|... +++.|++|.+..... ......+.+|+..+++++||||+++++.+... +..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 3667789999999999999975 689999999865432 12345689999999999999999999999888 8899999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|++.||+|||+. +++|+||+|+||++++++.++|+||-
T Consensus 81 e~~~~~~L~~~~~~~~----~~~~~~~~~~~~~l~~~l~~lh~~---~~~h~dl~p~ni~i~~~~~~~l~d~~ 146 (260)
T cd06606 81 EYVSGGSLSSLLKKFG----KLPEPVIRKYTRQILEGLAYLHSN---GIVHRDIKGANILVDSDGVVKLADFG 146 (260)
T ss_pred EecCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEcCCCCEEEcccc
Confidence 9999999999987653 489999999999999999999998 99999999999999999999999985
No 349
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=6.5e-21 Score=182.94 Aligned_cols=143 Identities=24% Similarity=0.331 Sum_probs=124.6
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
-|+..+.||+|.|+.|-.|++ -+|..||||++.+..... ....+..|++.|+.++|||||+||++......+|||+|.
T Consensus 19 LYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLEL 98 (864)
T KOG4717|consen 19 LYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILEL 98 (864)
T ss_pred eehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEe
Confidence 466678899999999999984 379999999996654322 233588999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
-.+|+|++++-++..+ +.+..+.+++.||..|+.|+|.. .+|||||||+||.+-+ -|-+|+.||-
T Consensus 99 GD~GDl~DyImKHe~G---l~E~La~kYF~QI~~AI~YCHqL---HVVHRDLKPENVVFFEKlGlVKLTDFG 164 (864)
T KOG4717|consen 99 GDGGDLFDYIMKHEEG---LNEDLAKKYFAQIVHAISYCHQL---HVVHRDLKPENVVFFEKLGLVKLTDFG 164 (864)
T ss_pred cCCchHHHHHHhhhcc---ccHHHHHHHHHHHHHHHHHHhhh---hhhcccCCcceeEEeeecCceEeeecc
Confidence 9999999999876543 88899999999999999999998 8999999999997654 6789999984
No 350
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=4.8e-21 Score=187.81 Aligned_cols=142 Identities=23% Similarity=0.302 Sum_probs=123.3
Q ss_pred CCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
-|..++.||-|+||+|..++ .++...||+|.+++... .....-...|-.+|.....+-||+|+-.|.+.+.+|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47778899999999999987 44577899999865421 1112236789999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++||++..+|...+ .+.+..+..++..++.|+++.|.. ++|||||||+|||||.||.+|+.||.
T Consensus 710 YIPGGDmMSLLIrmg----IFeE~LARFYIAEltcAiesVHkm---GFIHRDiKPDNILIDrdGHIKLTDFG 774 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIRMG----IFEEDLARFYIAELTCAIESVHKM---GFIHRDIKPDNILIDRDGHIKLTDFG 774 (1034)
T ss_pred ccCCccHHHHHHHhc----cCHHHHHHHHHHHHHHHHHHHHhc---cceecccCccceEEccCCceeeeecc
Confidence 999999999997654 378888889999999999999999 99999999999999999999999994
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.83 E-value=2.7e-20 Score=178.59 Aligned_cols=145 Identities=24% Similarity=0.426 Sum_probs=120.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||+||+|...+ ++.||||.++.........++.+|+.++.+.. ||||+++++++.+....+++|
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 3567788999999999999999764 89999999965433333445777887776665 999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+. +++.+++..... .+++..+..++.|+++||+|||+.. +|+||||||+||++++++.++|+||-
T Consensus 94 e~~~-~~l~~l~~~~~~---~l~~~~~~~i~~~i~~~l~~lH~~~--~i~H~dl~p~nill~~~~~~kL~dfg 160 (296)
T cd06618 94 ELMS-TCLDKLLKRIQG---PIPEDILGKMTVAIVKALHYLKEKH--GVIHRDVKPSNILLDASGNVKLCDFG 160 (296)
T ss_pred eccC-cCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhhC--CEecCCCcHHHEEEcCCCCEEECccc
Confidence 9985 477766654322 4889999999999999999999731 89999999999999999999999984
No 352
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.83 E-value=1.9e-20 Score=182.33 Aligned_cols=145 Identities=24% Similarity=0.367 Sum_probs=123.8
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEec-CCce
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEK 367 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~ 367 (447)
...+++|+..+.||+|+||.||+++.. +++.||+|++..... ......+.+|++++..++||||+++.+++.. ....
T Consensus 6 ~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 85 (328)
T cd07856 6 FEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLEDI 85 (328)
T ss_pred eccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCcE
Confidence 446788999999999999999999854 689999998854322 2234568899999999999999999998865 5578
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+ +++|.+++... .+++.....++.|+++||.|||+. +|+||||||+||++++++.++++||-
T Consensus 86 ~lv~e~~-~~~L~~~~~~~-----~~~~~~~~~~~~ql~~aL~~LH~~---~iiH~dl~p~Nili~~~~~~~l~dfg 153 (328)
T cd07856 86 YFVTELL-GTDLHRLLTSR-----PLEKQFIQYFLYQILRGLKYVHSA---GVVHRDLKPSNILINENCDLKICDFG 153 (328)
T ss_pred EEEeehh-ccCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEeECCCCCEEeCccc
Confidence 9999998 56898887642 267888889999999999999999 99999999999999999999999985
No 353
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.83 E-value=8.2e-22 Score=193.03 Aligned_cols=141 Identities=26% Similarity=0.337 Sum_probs=121.9
Q ss_pred CCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 298 SNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
.+...||.|+||+||+|..++ +-..|-|.+... +.....+|.-||++|+.+.||+||+|++.|...+.+++..|||.|
T Consensus 35 eIiGELGDGAFGKVyKA~nket~~lAAaKvIetk-seEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 35 EIIGELGDGAFGKVYKAVNKETKLLAAAKVIETK-SEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHhhhcCccchhhhhhhcccchhhhhhhhhccc-chhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 344568999999999998654 455677777432 233445799999999999999999999999999999999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
|.....+-+-.. .+.+.++..+++|++.||.|||++ +|||||||+.|||++-||+++++||..
T Consensus 114 GAVDaimlEL~r---~LtE~QIqvvc~q~ldALn~LHs~---~iIHRDLKAGNiL~TldGdirLADFGV 176 (1187)
T KOG0579|consen 114 GAVDAIMLELGR---VLTEDQIQVVCYQVLDALNWLHSQ---NIIHRDLKAGNILLTLDGDIRLADFGV 176 (1187)
T ss_pred chHhHHHHHhcc---ccchHHHHHHHHHHHHHHHHHhhc---chhhhhccccceEEEecCcEeeecccc
Confidence 999988876543 489999999999999999999999 999999999999999999999999964
No 354
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.83 E-value=1.7e-20 Score=189.72 Aligned_cols=149 Identities=21% Similarity=0.333 Sum_probs=115.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-----------------CCCcEEEEEEcccccccc-------------cHHHHHHH
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-----------------ADGKLVAVKRLKEERTSG-------------GELQFQTE 342 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~-------------~~~~~~~E 342 (447)
..++|++.++||+|+||.||+|.. ..++.||||+++...... .......|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999963 235679999986432110 11123457
Q ss_pred HHHHhcCCCCCc-----cceeeEEec--------CCceEEEeecCCCCChhhHhhccCCC--------------------
Q 013258 343 VKIISMAVHRNL-----LRLYGFCTT--------VTEKLLVYPYMTNGSVASRLRERQSS-------------------- 389 (447)
Q Consensus 343 ~~~l~~l~H~ni-----v~l~~~~~~--------~~~~~lv~e~~~~gsL~~~l~~~~~~-------------------- 389 (447)
+..+.+++|.++ ++++++|.. .++.++||||+++|+|.++++.....
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777776654 677777753 35689999999999999998753210
Q ss_pred CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 390 LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 390 ~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++|..+..++.|++.||.|||+. +|+||||||+|||++.++.+||+||-
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~---~ivHrDLKp~NILl~~~~~~kL~DFG 354 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRI---GIVHRDIKPENLLVTVDGQVKIIDFG 354 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCchHhEEECCCCcEEEEeCc
Confidence 12356788899999999999999998 99999999999999999999999994
No 355
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.83 E-value=2.8e-20 Score=183.06 Aligned_cols=142 Identities=23% Similarity=0.314 Sum_probs=120.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC------
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------ 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------ 364 (447)
..++|+..+.||+|+||.||+|+.. +++.||+|.+.... ......++.+|+.++..++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 3467999999999999999999854 68999999986432 222234677899999999999999999988643
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...++||||+. ++|.+.+... +++.....++.|++.||+|||+. +|+||||||+||++++++.+|++||-
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~------l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD------LDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEccCc
Confidence 34699999996 5888877542 77888999999999999999999 99999999999999999999999985
No 356
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.83 E-value=3.8e-20 Score=165.56 Aligned_cols=134 Identities=18% Similarity=0.218 Sum_probs=105.5
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccc--------------------c-----HHHHHHHHHHHhcCCCCCc
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG--------------------G-----ELQFQTEVKIISMAVHRNL 354 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~--------------------~-----~~~~~~E~~~l~~l~H~ni 354 (447)
...||+|+||+||+|+..+|+.||||+++...... . ...+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 46799999999999997789999999987542110 0 1124678999999999998
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhH-hhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceee
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASR-LRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILL 432 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl 432 (447)
.....+... ..++||||++++++... +... .++......++.|++.++.|+|+ . +|+||||||+|||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~---givHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKDV-----PLEEEEAEELYEQVVEQMRRLYQEA---GLVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhhc-----cCCHHHHHHHHHHHHHHHHHHHHhC---CEecCCCChhhEEE
Confidence 655444333 34899999998865433 3221 26778889999999999999999 8 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
+ ++.++++||-
T Consensus 152 ~-~~~~~liDFG 162 (190)
T cd05145 152 H-DGKPYIIDVS 162 (190)
T ss_pred E-CCCEEEEEcc
Confidence 9 8899999985
No 357
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.83 E-value=2.3e-20 Score=182.44 Aligned_cols=142 Identities=23% Similarity=0.380 Sum_probs=121.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcC-CCCCccceeeEEecC--CceE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV--TEKL 368 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~--~~~~ 368 (447)
.++|+..+.||+|+||.||+|... +++.+|+|.+.... .......+.+|+.++.++ +||||+++++++... ...+
T Consensus 6 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 6 LRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 457888899999999999999965 58899999885421 122234577899999999 999999999988653 3679
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+. ++|..++... .++|..+..++.|++.||+|||+. +|+||||||+||++++++.+|++||-
T Consensus 86 lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~i~H~dl~p~nill~~~~~~kl~d~g 152 (337)
T cd07852 86 LVFEYME-TDLHAVIRAN-----ILEDVHKRYIMYQLLKALKYIHSG---NVIHRDLKPSNILLNSDCRVKLADFG 152 (337)
T ss_pred EEecccc-cCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCcEEEeecc
Confidence 9999997 5998888653 378999999999999999999998 99999999999999999999999984
No 358
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.83 E-value=6.1e-20 Score=173.47 Aligned_cols=144 Identities=26% Similarity=0.308 Sum_probs=118.3
Q ss_pred HHHHHHhcCCCCCCcc--ccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhc-CCCCCccceeeEEec
Q 013258 288 RELQVATDGFSNKNIL--GRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISM-AVHRNLLRLYGFCTT 363 (447)
Q Consensus 288 ~~~~~~~~~~~~~~~l--g~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~-l~H~niv~l~~~~~~ 363 (447)
.+.....++|++.+.+ |+|+||.||+++. .++..+|+|.++...... . |+..... .+||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----~--e~~~~~~~~~h~~iv~~~~~~~~ 80 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----I--EPMVHQLMKDNPNFIKLYYSVTT 80 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----h--hHHHHHHhhcCCCEEEEEEEEec
Confidence 3444455677777776 9999999999985 468899999986432111 1 2222221 279999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKT 442 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~d 442 (447)
.+..++||||+++|+|.+++.... .++|..+..++.|+++||.|||+. +++||||||+||+++.++ .++++|
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~nil~~~~~~~~~l~d 153 (267)
T PHA03390 81 LKGHVLIMDYIKDGDLFDLLKKEG----KLSEAEVKKIIRQLVEALNDLHKH---NIIHNDIKLENVLYDRAKDRIYLCD 153 (267)
T ss_pred CCeeEEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEeCCCCeEEEec
Confidence 999999999999999999997653 489999999999999999999999 999999999999999998 999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|.
T Consensus 154 fg 155 (267)
T PHA03390 154 YG 155 (267)
T ss_pred Cc
Confidence 85
No 359
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.83 E-value=1.2e-20 Score=193.60 Aligned_cols=148 Identities=19% Similarity=0.240 Sum_probs=113.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC--CcEEEEEEc--------------ccc--cccccHHHHHHHHHHHhcCCCCCc
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD--GKLVAVKRL--------------KEE--RTSGGELQFQTEVKIISMAVHRNL 354 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~--~~~vavK~~--------------~~~--~~~~~~~~~~~E~~~l~~l~H~ni 354 (447)
..++|++.+.||+|+||+||+|..+. +..++.|.+ ... ........+.+|+.++..++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 45789999999999999999987532 222222211 000 011123358899999999999999
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhHhhccCCC-CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSS-LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 433 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~-~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~ 433 (447)
+++++++...+..++++|++. ++|.+++...... ...........|+.|++.||+|||++ +||||||||+|||++
T Consensus 226 v~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~---gIiHrDLKP~NILl~ 301 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDK---KLIHRDIKLENIFLN 301 (501)
T ss_pred CcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEC
Confidence 999999999999999999985 5777776543211 11123456778999999999999999 999999999999999
Q ss_pred CCCceeecccc
Q 013258 434 EDADQSSKTIL 444 (447)
Q Consensus 434 ~~~~~~i~df~ 444 (447)
.++.+||+||-
T Consensus 302 ~~~~vkL~DFG 312 (501)
T PHA03210 302 CDGKIVLGDFG 312 (501)
T ss_pred CCCCEEEEeCC
Confidence 99999999995
No 360
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.83 E-value=4.3e-20 Score=180.37 Aligned_cols=141 Identities=26% Similarity=0.311 Sum_probs=120.5
Q ss_pred CCC-CCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-------------cHHHHHHHHHHHhcCCCCCccceeeE
Q 013258 296 GFS-NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-------------GELQFQTEVKIISMAVHRNLLRLYGF 360 (447)
Q Consensus 296 ~~~-~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------------~~~~~~~E~~~l~~l~H~niv~l~~~ 360 (447)
+|. ..+.||+|+||+||+|+.. +++.||||.++...... ....+.+|++++..++|+||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 443 3477999999999999964 58999999986432221 01247789999999999999999999
Q ss_pred EecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceee
Q 013258 361 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 361 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
+...+..+++|||+. |+|.+++.... .+++.....++.|++.||+|||+. +|+||||||+||+++.++.+++
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~~~~----~~~~~~~~~~~~ql~~aL~~LH~~---~i~H~dl~~~nill~~~~~~kl 160 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVDRKI----RLTESQVKCILLQILNGLNVLHKW---YFMHRDLSPANIFINSKGICKI 160 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHeEECCCCCEEE
Confidence 999999999999997 68998886532 378899999999999999999998 9999999999999999999999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||-
T Consensus 161 ~dfg 164 (335)
T PTZ00024 161 ADFG 164 (335)
T ss_pred CCcc
Confidence 9985
No 361
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.83 E-value=3.2e-20 Score=177.82 Aligned_cols=135 Identities=25% Similarity=0.374 Sum_probs=119.8
Q ss_pred CccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 301 NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
..||+|+||.||++... +++.||||.+.... ......+.+|+.+++.++|+||+++++++...+..+++|||+++++|
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 57999999999999864 68999999885432 22344688999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++... .+++.....++.|++.||+|||+. +++||||||+||++++++.++++||-
T Consensus 105 ~~~~~~~-----~~~~~~~~~~~~ql~~~l~~lH~~---givH~dl~p~Nilv~~~~~~~l~dfg 161 (292)
T cd06657 105 TDIVTHT-----RMNEEQIAAVCLAVLKALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG 161 (292)
T ss_pred HHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEECCCCCEEEcccc
Confidence 9887542 278899999999999999999998 99999999999999999999999985
No 362
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.83 E-value=2.6e-20 Score=177.83 Aligned_cols=146 Identities=25% Similarity=0.358 Sum_probs=118.5
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeec
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+|...+.||+|+||.||+++.. +++.+|+|.+...........+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 4555678999999999999864 589999999865433334456889999999996 99999999999999999999999
Q ss_pred CCCCChhhHhhcc-CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+.. ++.++.... ......+++.....++.|++.||+|||+.. +|+||||||+||++++++.++++||.
T Consensus 85 ~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~dfg 153 (288)
T cd06616 85 MDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEEL--KIIHRDVKPSNILLDRNGNIKLCDFG 153 (288)
T ss_pred ccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcC--CeeccCCCHHHEEEccCCcEEEeecc
Confidence 864 555443211 011134889999999999999999999632 89999999999999999999999994
No 363
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.82 E-value=2.7e-20 Score=174.87 Aligned_cols=145 Identities=21% Similarity=0.274 Sum_probs=120.4
Q ss_pred CCCCCCccccCCCceEEEEEeCC-CcEEEEEEccccc----ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEER----TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
+|.+.+.||+|+||.||+++... +..+++|.++... ......++.+|+.+++.++||||+++++++.+.+..++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 47778999999999999998643 4556666654322 122234577899999999999999999999998999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.++++........+++..+..++.|+++||.|||+. +++|+||||+||++++ +.++++||-
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~---~i~h~~l~~~nili~~-~~~~l~d~g 150 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQR---RILHRDLKAKNIFLKN-NLLKIGDFG 150 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHc---CccccCCChhheEeec-CCEeecccC
Confidence 999999999999876433344689999999999999999999998 9999999999999985 558999984
No 364
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.82 E-value=3.5e-20 Score=181.17 Aligned_cols=142 Identities=22% Similarity=0.364 Sum_probs=121.1
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 367 (447)
++|.+.+.||+|+||.||+|+. .+++.||||.++... .......+.+|+.+++.++|+||+++++++... ...
T Consensus 5 ~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~ 84 (337)
T cd07858 5 TKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDV 84 (337)
T ss_pred cceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcE
Confidence 4688889999999999999985 468999999986432 222334678899999999999999999987643 347
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++||+. ++|.+++.... .+++.....++.|++.||.|||+. +++||||||+||+++.++.+||+||-
T Consensus 85 ~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~i~H~dlkp~Nil~~~~~~~kL~Dfg 153 (337)
T cd07858 85 YIVYELMD-TDLHQIIRSSQ----TLSDDHCQYFLYQLLRGLKYIHSA---NVLHRDLKPSNLLLNANCDLKICDFG 153 (337)
T ss_pred EEEEeCCC-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCEEECcCc
Confidence 99999996 68888886542 388999999999999999999999 99999999999999999999999985
No 365
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.82 E-value=3.6e-21 Score=202.27 Aligned_cols=145 Identities=33% Similarity=0.446 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
-+++....||.|.||.||.|. ..+|...|||.++-... ....+...+|+.++..++|||+|+++|+-.+++..++.||
T Consensus 1235 ~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFME 1314 (1509)
T KOG4645|consen 1235 FRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFME 1314 (1509)
T ss_pred eeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHH
Confidence 456677899999999999998 56799999998864322 2234468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILRR 446 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~~ 446 (447)
||++|+|.+.++..+. .++..-..+..|++.|++|||+. +||||||||+||+||.+|..|.+||...
T Consensus 1315 yC~~GsLa~ll~~gri----~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa 1381 (1509)
T KOG4645|consen 1315 YCEGGSLASLLEHGRI----EDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSA 1381 (1509)
T ss_pred HhccCcHHHHHHhcch----hhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccce
Confidence 9999999999976532 56666778889999999999999 9999999999999999999999999754
No 366
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.82 E-value=4e-20 Score=180.12 Aligned_cols=141 Identities=23% Similarity=0.360 Sum_probs=122.9
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----ceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~ 368 (447)
+|++.+.||+|+||.||+|+.. +++.||+|.+..... ......+.+|+.+++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4777899999999999999965 489999999865432 233456899999999999999999999988765 789
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|||++ ++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.++++||-
T Consensus 81 lv~e~~~-~~l~~~l~~~~----~l~~~~~~~i~~~l~~~l~~LH~~---gi~H~dlkp~nili~~~~~~~L~dfg 148 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ----PLTDDHIQYFLYQILRGLKYLHSA---NVIHRDLKPSNILVNSNCDLKICDFG 148 (330)
T ss_pred EEecchh-hhHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccC
Confidence 9999998 58888886543 489999999999999999999999 99999999999999999999999985
No 367
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.82 E-value=1.3e-19 Score=175.23 Aligned_cols=141 Identities=31% Similarity=0.446 Sum_probs=120.6
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|...+.||+|+||+||+|+.. +++.|++|.+...... .....+.+|+++++.++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 455678999999999999864 5889999998543221 2224688899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. |++.+.+.... ..+++..+..++.|++.|+.|||+. +++||||||+||++++++.++++||-
T Consensus 103 ~~-~~l~~~l~~~~---~~l~~~~~~~~~~qi~~al~~LH~~---gi~H~dl~p~nili~~~~~~kL~dfg 166 (313)
T cd06633 103 CL-GSASDLLEVHK---KPLQEVEIAAITHGALQGLAYLHSH---NMIHRDIKAGNILLTEPGQVKLADFG 166 (313)
T ss_pred CC-CCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChhhEEECCCCCEEEeecC
Confidence 96 57877776532 2488999999999999999999998 99999999999999999999999984
No 368
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.82 E-value=6.2e-20 Score=179.85 Aligned_cols=141 Identities=24% Similarity=0.387 Sum_probs=118.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 365 (447)
.++|...+.||+|+||.||+|+.. +++.||||.++.... ......+.+|+.+++.++||||+++++++....
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 367888999999999999999854 689999999864322 222346889999999999999999999886542
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++|+||+.. +|...... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.++++||.
T Consensus 94 ~~~lv~e~~~~-~l~~~~~~------~~~~~~~~~~~~qi~~aL~~LH~~---~i~H~dlkp~NIll~~~~~~kL~dfg 162 (342)
T cd07879 94 DFYLVMPYMQT-DLQKIMGH------PLSEDKVQYLVYQMLCGLKYIHSA---GIIHRDLKPGNLAVNEDCELKILDFG 162 (342)
T ss_pred eEEEEeccccc-CHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEeeCC
Confidence 46899999964 67665421 378899999999999999999999 99999999999999999999999985
No 369
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.82 E-value=7.5e-20 Score=173.84 Aligned_cols=141 Identities=26% Similarity=0.436 Sum_probs=123.0
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|+..+.||+|++|.||+|... +++.+++|.++..... .....+.+|+++++.++|+||+++++++...+..++++||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456688999999999999864 6889999998654322 23446889999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++ ++.+.+.... ..+++..+..++.|+++||.|||+. +|+|+||||+||++++++.++++||.
T Consensus 81 ~~-~l~~~l~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dl~p~nili~~~~~~~l~df~ 143 (283)
T cd05118 81 DT-DLYKLIKDRQ---RGLPESLIKSYLYQLLQGLAFCHSH---GILHRDLKPENLLINTEGVLKLADFG 143 (283)
T ss_pred CC-CHHHHHHhhc---ccCCHHHHHHHHHHHHHHHHHHHHC---CeeecCcCHHHEEECCCCcEEEeeee
Confidence 75 8888887643 2488999999999999999999999 99999999999999999999999985
No 370
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.82 E-value=1e-19 Score=169.74 Aligned_cols=135 Identities=33% Similarity=0.364 Sum_probs=120.2
Q ss_pred cccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 303 LGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
||+|+||.||++... +++.+|+|.++...... ....+.+|+.+++.++||||+++++.+...+..+++|||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999965 48999999986543222 334688999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++.... .+++.....++.|+++||.|+|+. +++|+||||+||++++++.++++||-
T Consensus 81 ~~~l~~~~----~l~~~~~~~~~~qi~~~l~~lh~~---~~~H~~l~p~ni~~~~~~~~~l~d~~ 138 (250)
T cd05123 81 FSHLSKEG----RFSEERARFYAAEIVLALEYLHSL---GIIYRDLKPENILLDADGHIKLTDFG 138 (250)
T ss_pred HHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcceEEEcCCCcEEEeecC
Confidence 99997653 388999999999999999999998 99999999999999999999999985
No 371
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.82 E-value=1.7e-20 Score=161.03 Aligned_cols=152 Identities=26% Similarity=0.347 Sum_probs=124.6
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHh-cCCCCCccceeeEEecCCce
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~ 367 (447)
+++..++......||+|++|.|-+-++ .+|+..|||+++.........+..+|+.+.. ....|.+|+++|.+......
T Consensus 41 ~eV~ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdv 120 (282)
T KOG0984|consen 41 FEVPADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDV 120 (282)
T ss_pred cccchhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccE
Confidence 344445555567899999999988774 4699999999987655555567888888764 45799999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++.||.|.- ||..+-++--......++...-+|+..+..||.|||++. .+||||+||+|||+|.+|++|++||-
T Consensus 121 wIcME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFG 194 (282)
T KOG0984|consen 121 WICMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFG 194 (282)
T ss_pred EEeHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccc
Confidence 999999964 887776654333345788888899999999999999974 89999999999999999999999995
No 372
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.82 E-value=5.4e-20 Score=177.40 Aligned_cols=144 Identities=30% Similarity=0.446 Sum_probs=120.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCC------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVT------ 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------ 365 (447)
.++|++.+.||+|+||.||+|+.. +++.+|+|.+....... ....+.+|+++++.++||||+++++++....
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 467888999999999999999965 58899999986443222 2335788999999999999999999875433
Q ss_pred --ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 366 --EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 366 --~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
..++|+||+.+ ++...+.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~---~~~~~~~~~~i~~~l~~al~~lH~~---~i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPS---VKLTESQIKCYMLQLLEGINYLHEN---HILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEEECcC
Confidence 46999999975 6777765432 2489999999999999999999999 9999999999999999999999998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 160 g 160 (311)
T cd07866 160 G 160 (311)
T ss_pred c
Confidence 4
No 373
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.81 E-value=1.1e-19 Score=175.36 Aligned_cols=141 Identities=31% Similarity=0.458 Sum_probs=120.5
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
|+..+.||+|+||.||+|+.. +++.+|+|.+.... ......++.+|+++++.++|+|++++.+++...+..++||||
T Consensus 17 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 96 (308)
T cd06634 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEY 96 (308)
T ss_pred HHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEc
Confidence 555678999999999999964 57899999885422 122234688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+. |++.+.+.... ..+++..+..++.|++.||.|||+. +++||||||+||++++++.++++||.
T Consensus 97 ~~-~~l~~~~~~~~---~~l~~~~~~~~~~~l~~~l~~LH~~---~i~H~dl~p~nil~~~~~~~kl~dfg 160 (308)
T cd06634 97 CL-GSASDLLEVHK---KPLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 160 (308)
T ss_pred cC-CCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHhEEECCCCcEEECCcc
Confidence 96 68887775432 2378899999999999999999998 99999999999999999999999985
No 374
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.81 E-value=9.5e-20 Score=173.04 Aligned_cols=141 Identities=30% Similarity=0.476 Sum_probs=123.3
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|+..+.||+|+||.||+|+.. +++.+|+|.++.... ......+..|+.+++.++|+|++++++++...+..++|+||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 455688999999999999965 589999999875432 222346788999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+ ++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||+|+||++++++.++++||.
T Consensus 81 ~-~~l~~~i~~~~---~~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~~l~~~ni~~~~~~~~~l~d~g 143 (282)
T cd07829 81 D-MDLKKYLDKRP---GPLSPNLIKSIMYQLLRGLAYCHSH---RILHRDLKPQNILINRDGVLKLADFG 143 (282)
T ss_pred C-cCHHHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChheEEEcCCCCEEEecCC
Confidence 8 59999997653 2388999999999999999999999 99999999999999999999999985
No 375
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.81 E-value=1.6e-19 Score=171.86 Aligned_cols=142 Identities=28% Similarity=0.473 Sum_probs=118.6
Q ss_pred CCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEecCCc-----
Q 013258 297 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCTTVTE----- 366 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~~~~~----- 366 (447)
|++.+.||+|+||.||+|+.++ ++.||+|.++...... ....+.+|+.++.++ +|+|++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 5567889999999999999764 8999999996443222 223466787776655 69999999999988776
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+++|||+. ++|.+++..... ..+++..+..++.|+++||.|||+. +++|+||||+||++++++.++++||.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~---~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPK--PGLPPETIKDLMRQLLRGVDFLHSH---RIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhEEEccCCCEEEeccC
Confidence 899999997 489888866432 2489999999999999999999998 99999999999999999999999985
No 376
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.81 E-value=1.1e-19 Score=177.29 Aligned_cols=141 Identities=24% Similarity=0.343 Sum_probs=117.2
Q ss_pred CCCCCCccccCCCceEEEEEeC-C--CcEEEEEEccccccc-ccHHHHHHHHHHHhcC-CCCCccceeeEEecC----Cc
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-D--GKLVAVKRLKEERTS-GGELQFQTEVKIISMA-VHRNLLRLYGFCTTV----TE 366 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~--~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~----~~ 366 (447)
+|...+.||+|+||.||+++.. + +..||+|.++..... .....+.+|++++.++ +||||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 3667789999999999999964 4 778999998643222 2234678899999999 599999999875432 45
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++++||+. ++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++.++|+||-
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givH~dlkp~Nili~~~~~~kl~Dfg 150 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ----PLTDAHFQSFIYQILCGLKYIHSA---NVLHRDLKPGNLLVNADCELKICDFG 150 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHeEEcCCCCEEeCcCC
Confidence 788889886 68988886543 388999999999999999999999 99999999999999999999999985
No 377
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.81 E-value=4.1e-20 Score=179.80 Aligned_cols=144 Identities=22% Similarity=0.295 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc----cccH---HHHHHHHHHHhcCC---CCCccceeeEEec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT----SGGE---LQFQTEVKIISMAV---HRNLLRLYGFCTT 363 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~----~~~~---~~~~~E~~~l~~l~---H~niv~l~~~~~~ 363 (447)
.+|.....+|+|+||+|+.|.++ +...|.||.+.++.. +.+. -..-.|+++|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 35788899999999999999965 467899999865431 1111 13567999999998 9999999999999
Q ss_pred CCceEEEeecC-CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 364 VTEKLLVYPYM-TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 364 ~~~~~lv~e~~-~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
.+..|++||-. ++-+|++++..+. .++++.+..|..||+.|.++||++ +|||||||-+||.+|.+|-+|+.|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp----~m~E~eAk~IFkQV~agi~hlh~~---~ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKP----RMDEPEAKLIFKQVVAGIKHLHDQ---GIVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccC----ccchHHHHHHHHHHHhcccccccc---CceecccccccEEEecCCeEEEee
Confidence 99999999965 5678999987653 389999999999999999999999 999999999999999999999999
Q ss_pred ccc
Q 013258 443 ILR 445 (447)
Q Consensus 443 f~~ 445 (447)
|-.
T Consensus 714 fgs 716 (772)
T KOG1152|consen 714 FGS 716 (772)
T ss_pred ccc
Confidence 964
No 378
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.81 E-value=7.3e-20 Score=185.98 Aligned_cols=151 Identities=30% Similarity=0.431 Sum_probs=129.7
Q ss_pred HHHHHHhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec--
Q 013258 288 RELQVATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT-- 363 (447)
Q Consensus 288 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~-- 363 (447)
+.+...++-|.+.+.||.|.+|+||+++ .++++.+|+|++..... ...+.+.|.++++.. .|||++.++|++.-
T Consensus 12 ~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d--~deEiE~eynil~~~~~hpnv~~fyg~~~k~~ 89 (953)
T KOG0587|consen 12 SSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTED--EEEEIELEYNMLKKYSHHPNVATFYGAFIKKD 89 (953)
T ss_pred hhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcc--ccHHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence 3344456778888999999999999998 45689999999866533 344678888888766 69999999999863
Q ss_pred ---CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceee
Q 013258 364 ---VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 364 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
++++|||||||.+||..++..... ...++|....+|++.++.||.+||.. .++|||+|-.|||++.++.+|+
T Consensus 90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~n---kviHRDikG~NiLLT~e~~VKL 164 (953)
T KOG0587|consen 90 PGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNN---KVIHRDIKGQNVLLTENAEVKL 164 (953)
T ss_pred CCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhc---ceeeecccCceEEEeccCcEEE
Confidence 678999999999999999988765 34589999999999999999999999 9999999999999999999999
Q ss_pred ccccc
Q 013258 441 KTILR 445 (447)
Q Consensus 441 ~df~~ 445 (447)
.||-.
T Consensus 165 vDFGv 169 (953)
T KOG0587|consen 165 VDFGV 169 (953)
T ss_pred eeeee
Confidence 99965
No 379
>PRK10345 hypothetical protein; Provisional
Probab=99.81 E-value=2.1e-19 Score=161.97 Aligned_cols=133 Identities=18% Similarity=0.230 Sum_probs=103.4
Q ss_pred CCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-----CCCCccceeeEEecCC---ceE
Q 013258 298 SNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-----VHRNLLRLYGFCTTVT---EKL 368 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-----~H~niv~l~~~~~~~~---~~~ 368 (447)
...+.||+|+||.||. ++ ++.. +||++.... .....++.+|+.++..+ .||||++++|++.+.. ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k-~IKv~~~~~-~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~ 80 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQR-CIKIVYHRG-DGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVY 80 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCe-EEEEEeccc-cchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEE
Confidence 3457899999999996 43 3444 689875532 22345799999999999 5799999999998864 333
Q ss_pred -EEeec--CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHH-hhhhcCCCCCeeecCCCCCceeeCCC----Cceee
Q 013258 369 -LVYPY--MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGL-SYLHEHCDPKIIHRDVKAANILLDED----ADQSS 440 (447)
Q Consensus 369 -lv~e~--~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL-~yLH~~~~~~ivHrDlkp~NILl~~~----~~~~i 440 (447)
+|+|| +.+|+|.+++.+.. +++. ..++.|++.++ +|||++ +|+||||||+|||++.. ..++|
T Consensus 81 ~~I~e~~G~~~~tL~~~l~~~~-----~~e~--~~~~~~~L~~l~~yLh~~---~IvhrDlKp~NILl~~~~~~~~~~~L 150 (210)
T PRK10345 81 DVIADFDGKPSITLTEFAEQCR-----YEED--VAQLRQLLKKLKRYLLDN---RIVTMELKPQNILCQRISESEVIPVV 150 (210)
T ss_pred EEEecCCCCcchhHHHHHHccc-----ccHh--HHHHHHHHHHHHHHHHHC---CEeecCCCHHHEEEeccCCCCCcEEE
Confidence 78999 66899999996531 4444 35677888887 999999 99999999999999743 37999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||+
T Consensus 151 iDg~ 154 (210)
T PRK10345 151 CDNI 154 (210)
T ss_pred EECC
Confidence 9964
No 380
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.80 E-value=1.8e-19 Score=167.22 Aligned_cols=126 Identities=21% Similarity=0.207 Sum_probs=110.1
Q ss_pred CCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChhhHhh
Q 013258 306 GGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLR 384 (447)
Q Consensus 306 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~ 384 (447)
|.||.||+++.. +++.||+|.++... .+.+|...+....||||+++++++...+..+++|||+++|+|.+++.
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~ 77 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHIS 77 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHH
Confidence 889999999964 68999999986532 23445555556679999999999999999999999999999999987
Q ss_pred ccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 385 ERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 385 ~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
... .+++.....++.|+++||+|||+. +|+||||||+||++++++.++++||.
T Consensus 78 ~~~----~l~~~~~~~~~~ql~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~df~ 130 (237)
T cd05576 78 KFL----NIPEECVKRWAAEMVVALDALHRE---GIVCRDLNPNNILLDDRGHIQLTYFS 130 (237)
T ss_pred Hhc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHEEEcCCCCEEEeccc
Confidence 643 388999999999999999999998 99999999999999999999999985
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.80 E-value=1.1e-21 Score=172.99 Aligned_cols=142 Identities=32% Similarity=0.531 Sum_probs=118.2
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc-HHHHHHHHHHHhcCCCCCccceeeEEecC--------Cc
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAVHRNLLRLYGFCTTV--------TE 366 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------~~ 366 (447)
|.....||+|.||+||+|+.+ +|+.||+|++-.+....+ .....+|+.++..++|+|++.+++.|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 344577999999999999955 588899987643332222 23578999999999999999999988642 24
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
.++|+++|+. +|..+|..... .++..+..+++.++..||.|+|+. .|+|||+||+|+||+.|+..|++||-.
T Consensus 99 ~ylVf~~ceh-DLaGlLsn~~v---r~sls~Ikk~Mk~Lm~GL~~iHr~---kilHRDmKaaNvLIt~dgilklADFGl 170 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLSNRKV---RFSLSEIKKVMKGLMNGLYYIHRN---KILHRDMKAANVLITKDGILKLADFGL 170 (376)
T ss_pred eeeeHHHhhh-hHHHHhcCccc---cccHHHHHHHHHHHHHHHHHHHHh---hHHhhcccHhhEEEcCCceEEeecccc
Confidence 7999999986 89998876532 378899999999999999999999 999999999999999999999999964
No 382
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.80 E-value=1.7e-19 Score=176.82 Aligned_cols=140 Identities=26% Similarity=0.366 Sum_probs=118.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC---------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--------- 364 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--------- 364 (447)
.+|...+.||+|+||.||+|+.. +++.||+|.+..... .....+.+|+++++.++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-chHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 56888899999999999999864 589999999855432 3345688999999999999999999876543
Q ss_pred -----CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCce
Q 013258 365 -----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQ 438 (447)
Q Consensus 365 -----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~ 438 (447)
...++|+||++ ++|.+++... .+++.....++.|+++||.|||+. +|+||||||+||+++. ++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~---givH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQG-----PLSEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCceE
Confidence 35789999997 5888887542 378899999999999999999998 9999999999999985 5578
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
+++||-
T Consensus 155 kl~dfg 160 (342)
T cd07854 155 KIGDFG 160 (342)
T ss_pred EECCcc
Confidence 999984
No 383
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.80 E-value=1.2e-19 Score=177.81 Aligned_cols=143 Identities=24% Similarity=0.364 Sum_probs=122.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCc----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE---- 366 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 366 (447)
..++|+..+.||+|+||.||+|+.. +++.||||.+..... ......+.+|+.+++.++||||+++.+++...+.
T Consensus 13 ~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07851 13 VPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLEDF 92 (343)
T ss_pred ccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccccccc
Confidence 3567888899999999999999965 588999999864321 2223457789999999999999999998766554
Q ss_pred --eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 --KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 --~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.++++||-
T Consensus 93 ~~~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~ql~~aL~~LH~~---gi~H~dlkp~Nill~~~~~~kL~dfg 163 (343)
T cd07851 93 QDVYLVTHLM-GADLNNIVKCQ-----KLSDDHIQFLVYQILRGLKYIHSA---GIIHRDLKPSNIAVNEDCELKILDFG 163 (343)
T ss_pred ccEEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEECCCCCEEEcccc
Confidence 89999998 67999888652 389999999999999999999998 99999999999999999999999985
No 384
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.80 E-value=3.8e-20 Score=174.79 Aligned_cols=145 Identities=27% Similarity=0.389 Sum_probs=121.4
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccH------HHHHHHHHHHhcCCCCCccceeeEEec-CCc
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGE------LQFQTEVKIISMAVHRNLLRLYGFCTT-VTE 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~ 366 (447)
++|-...+||+|+|++||+|. +...+.||||+-.....+.++ +-..+|.++.+.+.||.||++|+|+.- .+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 345567889999999999998 445789999985433222222 236889999999999999999999875 456
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeeccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 443 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df 443 (447)
.+-|+|||+|.+|.-+|...+. +++..+..|+.||..||.||.+. .|+|||-||||.|||+-+ -|++||.||
T Consensus 543 FCTVLEYceGNDLDFYLKQhkl----mSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQHKL----MSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHHhhhh----hhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 7899999999999999987653 78999999999999999999987 789999999999999965 468999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
.
T Consensus 618 G 618 (775)
T KOG1151|consen 618 G 618 (775)
T ss_pred c
Confidence 5
No 385
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.80 E-value=3e-20 Score=167.78 Aligned_cols=140 Identities=25% Similarity=0.313 Sum_probs=117.0
Q ss_pred hcCCCC-CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec----CCc
Q 013258 294 TDGFSN-KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT----VTE 366 (447)
Q Consensus 294 ~~~~~~-~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----~~~ 366 (447)
+++|++ ..+||-|-.|+|..+..+ +++.+|+|++.. .....+|+++.-+. .|||||+++++|.. ...
T Consensus 60 tedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 60 TEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD------SPKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred hhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc------CHHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 445544 367999999999999854 689999998843 23467888876655 69999999999864 456
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeeccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 443 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df 443 (447)
+.+|||+|+||.|++.+++++. ..+.+.++..|+.||..|+.|||+. +|.||||||+|+|... |...|++||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~--~afTErea~eI~~qI~~Av~~lH~~---nIAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGD--QAFTEREASEIMKQIGLAVRYLHSM---NIAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHHccc--ccchHHHHHHHHHHHHHHHHHHHhc---chhhccCChhheeeecCCCCcceEeccc
Confidence 7899999999999999998754 3589999999999999999999999 9999999999999975 446799998
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 209 G 209 (400)
T KOG0604|consen 209 G 209 (400)
T ss_pred c
Confidence 5
No 386
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.79 E-value=4.8e-19 Score=185.03 Aligned_cols=152 Identities=26% Similarity=0.380 Sum_probs=130.5
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeC----C----CcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeE
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLA----D----GKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGF 360 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~ 360 (447)
.+...++..+.+.+|+|.||+|++|... . ...||||.++..........+..|+++|..+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3444455566679999999999999742 1 3579999998776665667899999999988 59999999999
Q ss_pred EecCCceEEEeecCCCCChhhHhhccC---CC-------C--CCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCC
Q 013258 361 CTTVTEKLLVYPYMTNGSVASRLRERQ---SS-------L--PPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAA 428 (447)
Q Consensus 361 ~~~~~~~~lv~e~~~~gsL~~~l~~~~---~~-------~--~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~ 428 (447)
|..+...++|+||+..|+|.++|+..+ .- . ..+...+.+.++.|||.|++||++. ++|||||.++
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~---~~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASV---PCVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhC---Cccchhhhhh
Confidence 999999999999999999999999876 00 0 1377889999999999999999999 9999999999
Q ss_pred ceeeCCCCceeecccc
Q 013258 429 NILLDEDADQSSKTIL 444 (447)
Q Consensus 429 NILl~~~~~~~i~df~ 444 (447)
|||+.++..+||+||.
T Consensus 448 NVLi~~~~~~kIaDFG 463 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFG 463 (609)
T ss_pred hEEecCCCEEEEcccc
Confidence 9999999999999995
No 387
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=6.1e-20 Score=172.09 Aligned_cols=145 Identities=24% Similarity=0.363 Sum_probs=123.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc-HHH-HHHHHHHHhcC-CCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG-ELQ-FQTEVKIISMA-VHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~-~~~-~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 368 (447)
...+|....+||+|+||+|..|..+ +.+.+|||+++++..-+. ..+ -+.|-++|+.. +-|.++++..++++.+.+|
T Consensus 347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLy 426 (683)
T KOG0696|consen 347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLY 426 (683)
T ss_pred eecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhhee
Confidence 3456888999999999999999855 478899999987643221 112 34566777666 5788999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+.||+|.-.+++.+. +.++.+..+|..||-||=|||++ +||.||||..|||+|.+|.+||+||-
T Consensus 427 FVMEyvnGGDLMyhiQQ~Gk----FKEp~AvFYAaEiaigLFFLh~k---gIiYRDLKLDNvmLd~eGHiKi~DFG 495 (683)
T KOG0696|consen 427 FVMEYVNGGDLMYHIQQVGK----FKEPVAVFYAAEIAIGLFFLHSK---GIIYRDLKLDNVMLDSEGHIKIADFG 495 (683)
T ss_pred eEEEEecCchhhhHHHHhcc----cCCchhhhhhHHHHHHhhhhhcC---CeeeeeccccceEeccCCceEeeecc
Confidence 99999999999999987654 88899999999999999999999 99999999999999999999999995
No 388
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.78 E-value=1.8e-20 Score=166.60 Aligned_cols=142 Identities=27% Similarity=0.355 Sum_probs=114.1
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHh-cCCCCCccceeeEEecCCceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
...||.|+||+|+|-.++ .|+.+|||+++.........++..|.+... .-+.||||+++|.+...+..|+-||.|. -
T Consensus 69 lg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELMd-~ 147 (361)
T KOG1006|consen 69 LGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELMD-I 147 (361)
T ss_pred HHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHHh-h
Confidence 466999999999998754 699999999987655445567888887654 4479999999999999999999999995 4
Q ss_pred ChhhHhhcc-CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRER-QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~-~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+..+...- .-....+++.-.-.|......||.||-+.. .|||||+||+|||+|..|++|++||-
T Consensus 148 SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKLCDFG 213 (361)
T KOG1006|consen 148 SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKLCDFG 213 (361)
T ss_pred hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEeeeccc
Confidence 665543321 011123777777788888999999998864 89999999999999999999999994
No 389
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.78 E-value=4.3e-19 Score=158.44 Aligned_cols=148 Identities=24% Similarity=0.410 Sum_probs=119.3
Q ss_pred cccHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEE
Q 013258 284 RFSLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFC 361 (447)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~ 361 (447)
..++.|++.. ..||.|+.|.|++++.+ +|..+|||.+.........+++...+.++.+.+ .|.||+.+|||
T Consensus 88 ~~dindl~~l-------~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyF 160 (391)
T KOG0983|consen 88 QADINDLENL-------GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYF 160 (391)
T ss_pred ccChHHhhhH-------HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence 3455555543 45999999999999965 589999999977655555567777788776665 89999999999
Q ss_pred ecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 362 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 362 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
......++-||.|.. -+..+++... .++++...-++...+.+||.||.+++ +|||||+||+|||+|+.|++|++
T Consensus 161 i~n~dV~IcMelMs~-C~ekLlkrik---~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 161 ITNTDVFICMELMST-CAEKLLKRIK---GPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eeCchHHHHHHHHHH-HHHHHHHHhc---CCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEee
Confidence 999999999998843 3444444432 24777777788999999999999876 89999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 235 DFG 237 (391)
T KOG0983|consen 235 DFG 237 (391)
T ss_pred ccc
Confidence 995
No 390
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.78 E-value=9.6e-20 Score=158.66 Aligned_cols=136 Identities=21% Similarity=0.373 Sum_probs=114.8
Q ss_pred hcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCC--ceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT--EKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~~l 369 (447)
.++|++.+.+|+|.|++|+.|. ..+.+.+.||++++.. .+.+.+|+.+|..+. ||||+++++...++. ...|
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk----kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaL 112 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK----KKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSL 112 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH----HHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchh
Confidence 4578888999999999999998 5568899999997653 346899999999997 999999999987654 4679
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeeccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTI 443 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df 443 (447)
++||+.+-+...+... ++..+...+..++++||.|+|+. ||+|||+||.|+|+|... ..++.|.
T Consensus 113 iFE~v~n~Dfk~ly~t-------l~d~dIryY~~elLkALdyCHS~---GImHRDVKPhNvmIdh~~rkLrlIDW 177 (338)
T KOG0668|consen 113 IFEYVNNTDFKQLYPT-------LTDYDIRYYIYELLKALDYCHSM---GIMHRDVKPHNVMIDHELRKLRLIDW 177 (338)
T ss_pred HhhhhccccHHHHhhh-------hchhhHHHHHHHHHHHHhHHHhc---CcccccCCcceeeechhhceeeeeec
Confidence 9999999887665432 66778899999999999999999 999999999999999754 5666664
No 391
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.77 E-value=1.8e-18 Score=165.88 Aligned_cols=143 Identities=20% Similarity=0.254 Sum_probs=105.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC----CcEEEEEEccccccccc----------HHHHHHHHHHHhcCCCCCccceee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGG----------ELQFQTEVKIISMAVHRNLLRLYG 359 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~H~niv~l~~ 359 (447)
.++|++.+.||+|+||+||+|+..+ +..+|+|.......... ......+...+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3578889999999999999998654 34567765432211100 011223344556778999999999
Q ss_pred EEecCC----ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 360 FCTTVT----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 360 ~~~~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
++.... ..++++|++.. ++.+.+.... ..++.....++.|+++||+|||+. +|+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLVE-NTKEIFKRIK----CKNKKLIKNIMKDMLTTLEYIHEH---GISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhcc-CHHHHHHhhc----cCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCC
Confidence 766543 34677887643 5666654432 256788899999999999999998 99999999999999999
Q ss_pred Cceeecccc
Q 013258 436 ADQSSKTIL 444 (447)
Q Consensus 436 ~~~~i~df~ 444 (447)
+.++++||-
T Consensus 163 ~~~~l~DFG 171 (294)
T PHA02882 163 NRGYIIDYG 171 (294)
T ss_pred CcEEEEEcC
Confidence 999999994
No 392
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.77 E-value=6.7e-20 Score=181.06 Aligned_cols=144 Identities=28% Similarity=0.410 Sum_probs=127.7
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|.....+|.|.||.|||++. +.++..|||.++-+.. +...-...|+-+++.++|||||.++|.|...+..++.||
T Consensus 14 ~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~-dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 14 QDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPG-DDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred ccchhheeeecCCcccchhhhcccccCchhhheeeeccCC-ccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 35677788899999999999995 4689999999976643 334457889999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
||.+|+|++.-+-.+ ++++.+..++++...+||.|||+. +-+|||||-.|||+++.+++|++||-.
T Consensus 93 ycgggslQdiy~~Tg----plselqiayvcRetl~gl~ylhs~---gk~hRdiKGanilltd~gDvklaDfgv 158 (829)
T KOG0576|consen 93 YCGGGSLQDIYHVTG----PLSELQIAYVCRETLQGLKYLHSQ---GKIHRDIKGANILLTDEGDVKLADFGV 158 (829)
T ss_pred ecCCCcccceeeecc----cchhHHHHHHHhhhhccchhhhcC---CcccccccccceeecccCceeecccCc
Confidence 999999998876543 488899999999999999999999 889999999999999999999999953
No 393
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.77 E-value=4.8e-18 Score=155.36 Aligned_cols=142 Identities=34% Similarity=0.483 Sum_probs=124.8
Q ss_pred CCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|...+.||+|++|.||++...+ ++.+|+|.+...........+.+|++.+..++|+|++++++++...+..++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4556889999999999999764 889999998654332134578899999999999999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|.+++...... +++.....++.+++.++.|||.. +++|+|++|+||+++.++.++++||.
T Consensus 81 ~~~L~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~lh~~---~i~h~di~~~ni~v~~~~~~~l~d~g 143 (225)
T smart00221 81 GGDLFDYLRKKGGK---LSEEEARFYLRQILEALEYLHSL---GIVHRDLKPENILLGMDGLVKLADFG 143 (225)
T ss_pred CCCHHHHHHhcccC---CCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeeCc
Confidence 99999998764321 78899999999999999999998 99999999999999999999999985
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.76 E-value=1.2e-17 Score=150.32 Aligned_cols=136 Identities=37% Similarity=0.541 Sum_probs=120.4
Q ss_pred cccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChhh
Q 013258 303 LGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVAS 381 (447)
Q Consensus 303 lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~ 381 (447)
||+|.+|.||++...+ ++.+++|.+...........+.+|++.++.++|++++++++++......++++||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999754 899999998654332224579999999999999999999999999899999999999999999
Q ss_pred HhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 382 RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 382 ~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
++.... ..+++..+..++.++++++.|||+. +++|+||+|.||+++. ++.++++||-
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~---~~~H~dl~~~ni~~~~~~~~~~l~d~~ 138 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSN---GIIHRDLKPENILLDSDNGKVKLADFG 138 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHhhEEEeCCCCcEEEecCC
Confidence 987642 2378899999999999999999999 9999999999999999 8999999984
No 395
>smart00090 RIO RIO-like kinase.
Probab=99.75 E-value=5.8e-18 Score=156.21 Aligned_cols=137 Identities=14% Similarity=0.115 Sum_probs=105.4
Q ss_pred CCCCCCccccCCCceEEEEE--eCCCcEEEEEEcccccccc-----------------------cHHHHHHHHHHHhcCC
Q 013258 296 GFSNKNILGRGGFGKVYKGR--LADGKLVAVKRLKEERTSG-----------------------GELQFQTEVKIISMAV 350 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~--~~~~~~vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~ 350 (447)
.|++.+.||+|+||.||+|. ..+|+.||+|.++...... ....+.+|++.+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 5679999999986432100 0123568999999997
Q ss_pred CCC--ccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC-eeecCCCC
Q 013258 351 HRN--LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-IIHRDVKA 427 (447)
Q Consensus 351 H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-ivHrDlkp 427 (447)
+.. +.+.+++ ...++||||++++++........ .........++.|++.+++|||.. + |+||||||
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---g~iiH~Dikp 177 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV----EPEEEEEFELYDDILEEMRKLYKE---GELVHGDLSE 177 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC----CcchHHHHHHHHHHHHHHHHHHhc---CCEEeCCCCh
Confidence 643 3334432 23589999999988876542221 245556788999999999999999 8 99999999
Q ss_pred CceeeCCCCceeecccc
Q 013258 428 ANILLDEDADQSSKTIL 444 (447)
Q Consensus 428 ~NILl~~~~~~~i~df~ 444 (447)
+||+++ ++.+++.||-
T Consensus 178 ~NIli~-~~~i~LiDFg 193 (237)
T smart00090 178 YNILVH-DGKVVIIDVS 193 (237)
T ss_pred hhEEEE-CCCEEEEECh
Confidence 999999 8899999985
No 396
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=2.7e-19 Score=159.60 Aligned_cols=138 Identities=25% Similarity=0.337 Sum_probs=114.8
Q ss_pred CCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-----ceEEEe
Q 013258 299 NKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-----EKLLVY 371 (447)
Q Consensus 299 ~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-----~~~lv~ 371 (447)
..+.||-|+||.||....+ +|+.||.|++.... .-...+++.+|++++..++|.|+...++...-.. ++|.++
T Consensus 57 PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~T 136 (449)
T KOG0664|consen 57 PDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLT 136 (449)
T ss_pred CCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHH
Confidence 3488999999999999864 69999999885432 1123457899999999999999999998876543 568889
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.|. .+|...+-... .++-.....+..||++||.|||+. +|.||||||.|.|++++...||+||.
T Consensus 137 ELmQ-SDLHKIIVSPQ----~Ls~DHvKVFlYQILRGLKYLHsA---~ILHRDIKPGNLLVNSNCvLKICDFG 201 (449)
T KOG0664|consen 137 ELMQ-SDLHKIIVSPQ----ALTPDHVKVFVYQILRGLKYLHTA---NILHRDIKPGNLLVNSNCILKICDFG 201 (449)
T ss_pred HHHH-hhhhheeccCC----CCCcchhhhhHHHHHhhhHHHhhc---chhhccCCCccEEeccCceEEecccc
Confidence 9885 47777775433 377778889999999999999999 99999999999999999999999994
No 397
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=1.6e-17 Score=151.13 Aligned_cols=131 Identities=17% Similarity=0.220 Sum_probs=110.1
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEccccccccc-------HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-------ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-------~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.||+|++|.||+|+. +|..+++|.......... ...+.+|++++..++|+++.....++...+..+++|||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 677899998654322111 23578899999999999998888777777888999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|++|.+.+... .+ .+..++.+++.+|.++|.. +++|||++|+|||++ ++.+++.||.
T Consensus 81 ~~G~~L~~~~~~~-------~~-~~~~i~~~i~~~l~~lH~~---~i~H~Dl~p~Nil~~-~~~~~liDf~ 139 (211)
T PRK14879 81 IEGEPLKDLINSN-------GM-EELELSREIGRLVGKLHSA---GIIHGDLTTSNMILS-GGKIYLIDFG 139 (211)
T ss_pred eCCcCHHHHHHhc-------cH-HHHHHHHHHHHHHHHHHhC---CcccCCCCcccEEEE-CCCEEEEECC
Confidence 9999999988642 12 7889999999999999999 999999999999999 7889999995
No 398
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.74 E-value=3.7e-19 Score=170.81 Aligned_cols=144 Identities=24% Similarity=0.287 Sum_probs=124.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..+++....||-|+||.|-...... ...+|+|++++...-+ +..-...|-.+|..++.|.||++|-.|.+....|+.
T Consensus 419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmL 498 (732)
T KOG0614|consen 419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYML 498 (732)
T ss_pred hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhh
Confidence 3445556779999999999888654 3358999987654322 223477899999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||-|-||.+...|++++. ++..+...++..+.+|++|||++ +||+|||||+|.|+|.+|-+|+.||-
T Consensus 499 mEaClGGElWTiLrdRg~----Fdd~tarF~~acv~EAfeYLH~k---~iIYRDLKPENllLd~~Gy~KLVDFG 565 (732)
T KOG0614|consen 499 MEACLGGELWTILRDRGS----FDDYTARFYVACVLEAFEYLHRK---GIIYRDLKPENLLLDNRGYLKLVDFG 565 (732)
T ss_pred HHhhcCchhhhhhhhcCC----cccchhhhhHHHHHHHHHHHHhc---CceeccCChhheeeccCCceEEeehh
Confidence 999999999999998764 89999999999999999999999 99999999999999999999999984
No 399
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.73 E-value=2.3e-17 Score=152.35 Aligned_cols=132 Identities=35% Similarity=0.484 Sum_probs=117.2
Q ss_pred CCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChhhHhhc
Q 013258 307 GFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRE 385 (447)
Q Consensus 307 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~ 385 (447)
+||.||+|+.. +++.+|+|++...........+.+|++.+++++|+||+++++++......++++||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999976 48999999986554332256799999999999999999999999999999999999999999999876
Q ss_pred cCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 386 RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 386 ~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
... +++.....++.++++++.|||+. +++|+||+|+||++++++.++++||-.
T Consensus 81 ~~~----~~~~~~~~~~~~l~~~l~~lh~~---~i~h~~i~~~ni~~~~~~~~~l~d~~~ 133 (244)
T smart00220 81 RGR----LSEDEARFYARQILSALEYLHSN---GIIHRDLKPENILLDEDGHVKLADFGL 133 (244)
T ss_pred ccC----CCHHHHHHHHHHHHHHHHHHHHc---CeecCCcCHHHeEECCCCcEEEccccc
Confidence 432 78899999999999999999998 999999999999999999999999853
No 400
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.73 E-value=5.6e-18 Score=175.38 Aligned_cols=144 Identities=23% Similarity=0.242 Sum_probs=101.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-C----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE------E
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-D----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF------C 361 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~------~ 361 (447)
..++|+..+.||+|+||.||+|++. + +..||||.++.... ...+..| .+....+.+++.+... +
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~---~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~ 204 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA---VEIWMNE--RVRRACPNSCADFVYGFLEPVSS 204 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch---hHHHHHH--HHHhhchhhHHHHHHhhhccccc
Confidence 4578999999999999999999964 4 68999998754221 1111111 1122223333322221 2
Q ss_pred ecCCceEEEeecCCCCChhhHhhccCCC----------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCC
Q 013258 362 TTVTEKLLVYPYMTNGSVASRLRERQSS----------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 425 (447)
Q Consensus 362 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~----------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 425 (447)
....+.++||||+.+++|.+++...... .....+..+..++.|++.||+|||++ +|+||||
T Consensus 205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~---gIiHRDL 281 (566)
T PLN03225 205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHST---GIVHRDV 281 (566)
T ss_pred ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHC---CEEeCcC
Confidence 4566789999999999999998754210 00011233557899999999999998 9999999
Q ss_pred CCCceeeCC-CCceeecccc
Q 013258 426 KAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 426 kp~NILl~~-~~~~~i~df~ 444 (447)
||+|||+++ ++.+||+||-
T Consensus 282 KP~NILl~~~~~~~KL~DFG 301 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLG 301 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCC
Confidence 999999996 5789999995
No 401
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.73 E-value=3.2e-18 Score=156.75 Aligned_cols=145 Identities=25% Similarity=0.330 Sum_probs=124.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccccc--HHHHHHHHHHHhcC-CCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 368 (447)
...+|...++||+|+|++|-.+++ ++.+.||+|+++++-..++ ..-.+.|-.+.... +||.+|-+..++++....+
T Consensus 248 ~l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlf 327 (593)
T KOG0695|consen 248 GLQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLF 327 (593)
T ss_pred ccccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEE
Confidence 346789999999999999999985 4689999999986543322 22355666666554 7999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|.||+++|+|.-+++..+. +++..+..+...|..||.|||++ +||.||||..|||+|.+|.+|+.|+-
T Consensus 328 fvieyv~ggdlmfhmqrqrk----lpeeharfys~ei~lal~flh~r---giiyrdlkldnvlldaeghikltdyg 396 (593)
T KOG0695|consen 328 FVIEYVNGGDLMFHMQRQRK----LPEEHARFYSAEICLALNFLHER---GIIYRDLKLDNVLLDAEGHIKLTDYG 396 (593)
T ss_pred EEEEEecCcceeeehhhhhc----CcHHHhhhhhHHHHHHHHHHhhc---CeeeeeccccceEEccCCceeecccc
Confidence 99999999999888876543 89999999999999999999999 99999999999999999999999974
No 402
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.72 E-value=2.2e-17 Score=148.86 Aligned_cols=133 Identities=22% Similarity=0.164 Sum_probs=104.5
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc---------------------ccHHHHHHHHHHHhcCCCCC-
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---------------------GGELQFQTEVKIISMAVHRN- 353 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~H~n- 353 (447)
-|...+.||+|+||.||++..++|+.||||+++..... .....+..|..++..+.|++
T Consensus 16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 95 (198)
T cd05144 16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF 95 (198)
T ss_pred hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence 37778999999999999999888999999987543210 00113677888898888874
Q ss_pred -ccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 354 -LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 354 -iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+++.++ ....++||||+++++|...... .....++.++++++.++|+. +|+||||||+||++
T Consensus 96 ~v~~~~~----~~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~---gi~H~Dl~p~Nill 158 (198)
T cd05144 96 PVPKPID----WNRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKH---GIIHGDLSEFNILV 158 (198)
T ss_pred CCCceee----cCCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHC---CCCcCCCCcccEEE
Confidence 444443 2456899999999998765321 23467889999999999998 99999999999999
Q ss_pred CCCCceeeccccc
Q 013258 433 DEDADQSSKTILR 445 (447)
Q Consensus 433 ~~~~~~~i~df~~ 445 (447)
++++.++++||.-
T Consensus 159 ~~~~~~~liDfg~ 171 (198)
T cd05144 159 DDDEKIYIIDWPQ 171 (198)
T ss_pred cCCCcEEEEECCc
Confidence 9999999999964
No 403
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.72 E-value=7e-18 Score=150.59 Aligned_cols=141 Identities=21% Similarity=0.330 Sum_probs=116.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeE-EecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGF-CTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~-~~~~~~~~lv~ 371 (447)
+.|.+.+.+|+|.||++-.++++ +.+.+++|.++.... ...+|.+|...--.+ .|.||+.-++. +++.+..++++
T Consensus 24 d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t--t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~q 101 (378)
T KOG1345|consen 24 DVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT--TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQ 101 (378)
T ss_pred hhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh--hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEee
Confidence 45778899999999999999976 477899999865533 345799998765555 48999988764 56677888999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-CCC-ceeeccccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDA-DQSSKTILR 445 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~-~~~i~df~~ 445 (447)
||++.|+|.+-+...+ +.+.....++.|+++|++|||++ ++||||||.+||||- .|+ .+|++||..
T Consensus 102 E~aP~gdL~snv~~~G-----igE~~~K~v~~ql~SAi~fMHsk---nlVHRdlK~eNiLif~~df~rvKlcDFG~ 169 (378)
T KOG1345|consen 102 EFAPRGDLRSNVEAAG-----IGEANTKKVFAQLLSAIEFMHSK---NLVHRDLKAENILIFDADFYRVKLCDFGL 169 (378)
T ss_pred ccCccchhhhhcCccc-----ccHHHHHHHHHHHHHHHHHhhcc---chhhcccccceEEEecCCccEEEeeeccc
Confidence 9999999998876532 67788899999999999999999 999999999999984 343 789999964
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.71 E-value=1.6e-17 Score=159.14 Aligned_cols=135 Identities=22% Similarity=0.332 Sum_probs=113.1
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-----C---CCccceeeEEec-
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----H---RNLLRLYGFCTT- 363 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H---~niv~l~~~~~~- 363 (447)
..+|.+.++||=|.|++||.|.. .+.+.||+|+.+... .-....+.||++|++++ | .+||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAq--hYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~Fkhs 154 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQ--HYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHS 154 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehhh--HHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceec
Confidence 36788889999999999999985 457899999986542 22345788999998874 3 369999999875
Q ss_pred ---CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 364 ---VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 364 ---~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
+.+.+||+|++ |-+|..+|.....+. ++...+..|+.||+.||.|||+.| +|||-||||+|||+...
T Consensus 155 GpNG~HVCMVfEvL-GdnLLklI~~s~YrG--lpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~~~ 224 (590)
T KOG1290|consen 155 GPNGQHVCMVFEVL-GDNLLKLIKYSNYRG--LPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLCST 224 (590)
T ss_pred CCCCcEEEEEehhh-hhHHHHHHHHhCCCC--CcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeeecc
Confidence 45789999998 668999998765543 888999999999999999999998 99999999999999765
No 405
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.71 E-value=4.4e-17 Score=146.91 Aligned_cols=127 Identities=17% Similarity=0.235 Sum_probs=103.3
Q ss_pred ccccCCCceEEEEEeCCCcEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 302 ILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
.||+|+||.||+|.+ ++..+++|......... ...++.+|++++..++|+++.....++...+..+++|||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 57889999864322111 1235778999999999988766666666677789999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|.+.+.... ..++.+++++|.++|+. +++|||+||+||+++ ++.+++.||.
T Consensus 80 ~g~~l~~~~~~~~-----------~~~~~~i~~~l~~lH~~---gi~H~Dl~~~Nil~~-~~~~~liDfg 134 (199)
T TIGR03724 80 EGKPLKDVIEEGN-----------DELLREIGRLVGKLHKA---GIVHGDLTTSNIIVR-DDKLYLIDFG 134 (199)
T ss_pred CCccHHHHHhhcH-----------HHHHHHHHHHHHHHHHC---CeecCCCCcceEEEE-CCcEEEEECC
Confidence 9999998875421 07899999999999999 999999999999999 8899999985
No 406
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.71 E-value=6.6e-17 Score=143.28 Aligned_cols=129 Identities=18% Similarity=0.136 Sum_probs=101.3
Q ss_pred CCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc---HHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeec
Q 013258 298 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG---ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.....|++|+||+||.+.. .+..++.+.+........ ...+.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3457899999999997665 577788777754432111 224789999999995 5889999886 457999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCC-CCCceeeCCCCceeeccccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV-KAANILLDEDADQSSKTILR 445 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl-kp~NILl~~~~~~~i~df~~ 445 (447)
++|.+|.+.+.. ....+..|++++|+|+|++ +|+|||| ||+|||+++++.++|+||-.
T Consensus 80 I~G~~L~~~~~~-----------~~~~~~~qi~~~L~~lH~~---GIvHrDL~kp~NILv~~~g~i~LIDFG~ 138 (218)
T PRK12274 80 LAGAAMYQRPPR-----------GDLAYFRAARRLLQQLHRC---GVAHNDLAKEANWLVQEDGSPAVIDFQL 138 (218)
T ss_pred ecCccHHhhhhh-----------hhHHHHHHHHHHHHHHHHC---cCccCCCCCcceEEEcCCCCEEEEECCC
Confidence 999988654321 1135678999999999999 9999999 79999999999999999964
No 407
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.71 E-value=4.1e-17 Score=147.65 Aligned_cols=135 Identities=10% Similarity=0.087 Sum_probs=109.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccH--H------HHHHHHHHHhcCCCCCccceeeEEecC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGE--L------QFQTEVKIISMAVHRNLLRLYGFCTTV 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~--~------~~~~E~~~l~~l~H~niv~l~~~~~~~ 364 (447)
..++|...+++|.|+||.||.... +++.+|||.+++....... . .+.+|++.+.+++|++|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 457899999999999999999765 5778999999755432221 1 168999999999999999998886532
Q ss_pred --------CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 365 --------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 365 --------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
...+++|||++|.+|.+... ++. ....+++.++..+|.. +++|||+||+||++++++
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~---gi~H~Dikp~Nili~~~g 172 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQH---GMVSGDPHKGNFIVSKNG 172 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHc---CCccCCCChHHEEEeCCC
Confidence 35789999999999977631 221 3456899999999999 999999999999999998
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
+++.||-
T Consensus 173 -i~liDfg 179 (232)
T PRK10359 173 -LRIIDLS 179 (232)
T ss_pred -EEEEECC
Confidence 9999985
No 408
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.71 E-value=1.2e-17 Score=169.21 Aligned_cols=140 Identities=29% Similarity=0.339 Sum_probs=111.1
Q ss_pred CCCCCccccCCCce-EEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecC
Q 013258 297 FSNKNILGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 297 ~~~~~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
|...+++|.|+-|+ ||+|.+ +|+.||||++-.+. ..-..+|+..+..- +|||||++++.-.++...|+..|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e~----~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEEF----FDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhHh----HHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh
Confidence 45567899999886 799998 57899999985432 22467899999877 5999999998888888999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---C--Cceeeccccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---D--ADQSSKTILR 445 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~--~~~~i~df~~ 445 (447)
. .+|.+++...........-.....+..|+++||++||+. +||||||||.||||+. + ..++|+||-.
T Consensus 586 ~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl---~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl 657 (903)
T KOG1027|consen 586 A-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSL---KIVHRDLKPQNILISVPSADGTLRAKISDFGL 657 (903)
T ss_pred h-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhc---ccccccCCCceEEEEccCCCcceeEEeccccc
Confidence 6 599999977411111111134577889999999999998 9999999999999987 3 4789999964
No 409
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.70 E-value=6.6e-17 Score=167.33 Aligned_cols=133 Identities=15% Similarity=0.201 Sum_probs=106.7
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEE-ccccccc------ccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKR-LKEERTS------GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~-~~~~~~~------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
..|...+.||+|+||.||+|.+.+.. +++|+ ....... ....++.+|++++..++|++++....++......
T Consensus 333 ~~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~ 411 (535)
T PRK09605 333 RRKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEK 411 (535)
T ss_pred cccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCC
Confidence 44566789999999999999875443 33443 2211111 1123588999999999999999888888777788
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++++|.+++. ....++.+++++|.|||+. +|+|||+||+|||+ +++.++++||-
T Consensus 412 ~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~---giiHrDlkp~NILl-~~~~~~liDFG 472 (535)
T PRK09605 412 TIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKA---GIVHGDLTTSNFIV-RDDRLYLIDFG 472 (535)
T ss_pred EEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhC---CCccCCCChHHEEE-ECCcEEEEeCc
Confidence 99999999999998875 3467899999999999999 99999999999999 67889999984
No 410
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.70 E-value=3.3e-17 Score=159.17 Aligned_cols=142 Identities=21% Similarity=0.279 Sum_probs=120.4
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc-HHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 372 (447)
..|++.++||+||.++||++...+.+.||+|++.....+.. ...|..|+..|.+++ |.+||+|++|-..++.+|||||
T Consensus 361 ~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvmE 440 (677)
T KOG0596|consen 361 REYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVME 440 (677)
T ss_pred chhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEee
Confidence 45888899999999999999988888999998765433322 346999999999995 9999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|=+ -+|.++|+..... ..+| .+..+..|++.++.++|.+ +|||.||||.|+|+- .|..|+.||.
T Consensus 441 ~Gd-~DL~kiL~k~~~~--~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLlV-kG~LKLIDFG 504 (677)
T KOG0596|consen 441 CGD-IDLNKILKKKKSI--DPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLLV-KGRLKLIDFG 504 (677)
T ss_pred ccc-ccHHHHHHhccCC--CchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEEE-eeeEEeeeec
Confidence 774 5999999886542 2335 7788999999999999999 999999999999986 5779999985
No 411
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.69 E-value=3.1e-17 Score=162.55 Aligned_cols=140 Identities=24% Similarity=0.316 Sum_probs=116.4
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
.++.|.....+|.|+|+.|-++.. .+++..+||++.... .+-.+|+.++... +||||+++.+.+....+.++|
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~-----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v 394 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA-----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLV 394 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheeccccc-----cccccccchhhhhcCCCcceeecceecCCceeeee
Confidence 356677778899999999999985 468899999996541 1234566555544 799999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee-CCCCceeeccccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL-DEDADQSSKTILR 445 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl-~~~~~~~i~df~~ 445 (447)
||++.+|-+.+.+..... .. ..+..|+.+++.|+.|||++ +||||||||+|||+ ++.++.+++||-.
T Consensus 395 ~e~l~g~ell~ri~~~~~----~~-~e~~~w~~~lv~Av~~LH~~---gvvhRDLkp~NIL~~~~~g~lrltyFG~ 462 (612)
T KOG0603|consen 395 MELLDGGELLRRIRSKPE----FC-SEASQWAAELVSAVDYLHEQ---GVVHRDLKPGNILLDGSAGHLRLTYFGF 462 (612)
T ss_pred ehhccccHHHHHHHhcch----hH-HHHHHHHHHHHHHHHHHHhc---CeeecCCChhheeecCCCCcEEEEEech
Confidence 999999988888765432 22 67778999999999999999 99999999999999 5889999999964
No 412
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.66 E-value=2.7e-16 Score=147.04 Aligned_cols=153 Identities=24% Similarity=0.330 Sum_probs=128.3
Q ss_pred HHHHHHHhcCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeE
Q 013258 287 LRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGF 360 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~ 360 (447)
..++.+..++++...++-+|.||+||+|.+++ .+.|-||.++...+..+...+..|...+..+.|||+.++.++
T Consensus 276 ~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V 355 (563)
T KOG1024|consen 276 LQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGV 355 (563)
T ss_pred HHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEE
Confidence 45667777788888999999999999996543 356778888777666666678999999999999999999999
Q ss_pred Eec-CCceEEEeecCCCCChhhHhhccCCC----CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 361 CTT-VTEKLLVYPYMTNGSVASRLRERQSS----LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 361 ~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~----~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
+.+ .+..+..|.++.-|+|..+|+.++.. ...+.-.+...++.|++.|++|||.+ +|||.||.++|++||+.
T Consensus 356 ~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~---~ViHkDiAaRNCvIdd~ 432 (563)
T KOG1024|consen 356 SIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNH---GVIHKDIAARNCVIDDQ 432 (563)
T ss_pred EeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhc---Ccccchhhhhcceehhh
Confidence 876 45678999999999999999854321 23456667889999999999999999 99999999999999999
Q ss_pred Cceeecc
Q 013258 436 ADQSSKT 442 (447)
Q Consensus 436 ~~~~i~d 442 (447)
.++|++|
T Consensus 433 LqVkltD 439 (563)
T KOG1024|consen 433 LQVKLTD 439 (563)
T ss_pred eeEEecc
Confidence 9999987
No 413
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.63 E-value=6.1e-16 Score=136.10 Aligned_cols=142 Identities=20% Similarity=0.252 Sum_probs=118.0
Q ss_pred HhcCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCC-CCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH-RNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv 370 (447)
....|...+.||.|+||.+|.|. ..+|..||||.-+.. ....++..|..+...++| ..|..+..|..+.+.-.+|
T Consensus 13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~---a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlV 89 (341)
T KOG1163|consen 13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSK---AKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLV 89 (341)
T ss_pred eccceEEEEeecCCchhheeeeeeccCCceEEEEeeccc---CCCcchhHHHHHHHHhccCCCCchhhhhccccccceee
Confidence 34578889999999999999998 667999999975433 233467889999988875 5688888888899999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~ 444 (447)
||.+ |.||+++..-+.. .++..+.+-++-|++.-++|+|.+ ++|||||||+|.|..-+. ...+.||-
T Consensus 90 MdLL-GPsLEdLfnfC~R---~ftmkTvLMLaDQml~RiEyvH~r---~fiHRDIKPdNFLMGlgrh~~kl~LIDFG 159 (341)
T KOG1163|consen 90 MDLL-GPSLEDLFNFCSR---RFTMKTVLMLADQMLSRIEYVHLR---NFIHRDIKPDNFLMGLGRHCNKLYLIDFG 159 (341)
T ss_pred eecc-CccHHHHHHHHhh---hhhHHhHHHHHHHHHHHHHHHHhh---ccccccCCccceeeccccccceEEEEecc
Confidence 9988 7799998876543 378889999999999999999999 999999999999987543 46777774
No 414
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.63 E-value=1.9e-15 Score=129.17 Aligned_cols=130 Identities=17% Similarity=0.123 Sum_probs=109.3
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCC--CCccceeeEEecCCceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--RNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
.+.||+|.++.||++...+ ..+++|..+.... ...+.+|+..+..++| .++++++++....+..++++||++++
T Consensus 3 ~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~---~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 3 IKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK---GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred ceecccccccceEEEEecC-CeEEEEecCCCCc---hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 4679999999999999754 7899998855432 3468899999999977 58999998888878899999999987
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+... +......++.+++++++++|.....+++|+|+||+||++++++.+++.||.
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~ 134 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWE 134 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecc
Confidence 76543 345667889999999999998654579999999999999998999999985
No 415
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.63 E-value=2.7e-16 Score=143.71 Aligned_cols=138 Identities=25% Similarity=0.320 Sum_probs=112.6
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccc-cccccHHHHHHHHHHHhcCCCCCccceeeEEecC------Cce
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEE-RTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TEK 367 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~~ 367 (447)
+|.....+|.|.- .|..+... .++.||+|.+... ......++..+|..++..++|+||++++.++.-. .+.
T Consensus 18 Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~ 96 (369)
T KOG0665|consen 18 RYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEV 96 (369)
T ss_pred eeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhH
Confidence 4556677888876 55555432 4889999987432 2233345678999999999999999999998643 357
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|||||. ++|...++.. ++-.+..+|..|+..|+.|||+. +|+||||||+||++..++..||.||.
T Consensus 97 y~v~e~m~-~nl~~vi~~e------lDH~tis~i~yq~~~~ik~lhs~---~IihRdLkPsnivv~~~~~lKi~dfg 163 (369)
T KOG0665|consen 97 YLVMELMD-ANLCQVILME------LDHETISYILYQMLCGIKHLHSA---GIIHRDLKPSNIVVNSDCTLKILDFG 163 (369)
T ss_pred HHHHHhhh-hHHHHHHHHh------cchHHHHHHHHHHHHHHHHHHhc---ceeecccCcccceecchhheeeccch
Confidence 99999995 5899888743 67788899999999999999999 99999999999999999999999996
No 416
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.63 E-value=7e-16 Score=145.90 Aligned_cols=141 Identities=21% Similarity=0.348 Sum_probs=119.7
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCC
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVT 365 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~ 365 (447)
......|...++||+|.|+.||++.+. .++.||+|.+...... .+...|++.|..+ .+.||+++.+++...+
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p---~ri~~El~~L~~~gG~~ni~~~~~~~rnnd 108 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP---SRILNELEMLYRLGGSDNIIKLNGCFRNND 108 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc---hHHHHHHHHHHHhccchhhhcchhhhccCC
Confidence 334466888999999999999999743 3678999998665433 2588999999988 5999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc-eeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-QSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-~~i~df~ 444 (447)
...+|+||++.-+..+++.. ++......+.+.+..||.|+|.+ +||||||||+|+|.+.... -.+.||-
T Consensus 109 ~v~ivlp~~~H~~f~~l~~~-------l~~~~i~~Yl~~ll~Al~~~h~~---GIvHRDiKpsNFL~n~~t~rg~LvDFg 178 (418)
T KOG1167|consen 109 QVAIVLPYFEHDRFRDLYRS-------LSLAEIRWYLRNLLKALAHLHKN---GIVHRDIKPSNFLYNRRTQRGVLVDFG 178 (418)
T ss_pred eeEEEecccCccCHHHHHhc-------CCHHHHHHHHHHHHHHhhhhhcc---CccccCCCccccccccccCCceEEech
Confidence 99999999999988888764 66788999999999999999999 9999999999999997654 4666774
No 417
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.62 E-value=8.4e-16 Score=137.09 Aligned_cols=131 Identities=20% Similarity=0.241 Sum_probs=93.0
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEccccccccc-HHH----------------------HHHHHHHHhcCCCCC--c
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG-ELQ----------------------FQTEVKIISMAVHRN--L 354 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~-~~~----------------------~~~E~~~l~~l~H~n--i 354 (447)
.+.||+|+||+||+|...+++.||||+++....... ... ...|...+..+.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 467999999999999987899999999865321111 111 134555555554433 3
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhH-hhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceee
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASR-LRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILL 432 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~-l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl 432 (447)
.+.+++ ...++||||++++.+... +.... .. .....++.+++.++.++|. . +|+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~-----~~-~~~~~~~~~~~~~l~~lh~~~---~ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR-----LL-EDPEELYDQILELMRKLYREA---GLVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh-----hc-ccHHHHHHHHHHHHHHHhhcc---CcCcCCCChhhEEE
Confidence 334332 346899999999654321 22111 11 4567899999999999999 7 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
+ ++.+++.||-
T Consensus 149 ~-~~~~~liDfg 159 (187)
T cd05119 149 D-DGKVYIIDVP 159 (187)
T ss_pred E-CCcEEEEECc
Confidence 9 8999999985
No 418
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.60 E-value=4e-15 Score=136.66 Aligned_cols=140 Identities=20% Similarity=0.270 Sum_probs=117.7
Q ss_pred cCCCCCCccccCCCceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e 372 (447)
-.|.+.+.||+|+||+.+.|+ +-++++||||.-+... ...++..|.+..+.+. .++|...+-|..++.+-.||+|
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS---~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS---EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC---CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 368889999999999999998 5679999999754322 2346778888888774 6899999988888889999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-----ceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-----DQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-----~~~i~df~ 444 (447)
.+ |-||+++..-++. .++..++..||.|++.-++|+|++ .+|.|||||+|+||..-+ .+.+.||-
T Consensus 105 LL-GPSLEDLFD~CgR---~FSvKTV~miA~Qmi~rie~vH~k---~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFG 174 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCGR---RFSVKTVAMIAKQMITRIEYVHEK---DLIYRDIKPDNFLIGRPGTKDANVIHIIDFG 174 (449)
T ss_pred hh-CcCHHHHHHHhcC---cccHHhHHHHHHHHHHHHHHHHhc---ceeecccCccceeecCCCCCCCceEEEEecc
Confidence 88 7799988876654 388899999999999999999999 999999999999998644 46788885
No 419
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.60 E-value=4.4e-15 Score=144.08 Aligned_cols=142 Identities=21% Similarity=0.261 Sum_probs=115.3
Q ss_pred CCCCCCccccCCCceEEEEEeCCC--cEEEEEEcccccccccHHHHHHHHHHHhcCCC----CCccceeeEE-ecCCceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADG--KLVAVKRLKEERTSGGELQFQTEVKIISMAVH----RNLLRLYGFC-TTVTEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~-~~~~~~~ 368 (447)
+|.+.+.||+|+||.||.+..... ..+|+|........... .+..|+.++..+.. +++.++++.. ......+
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~-~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~ 97 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPS-VLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNF 97 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCc-cchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeE
Confidence 788899999999999999996543 57899987554333322 57788888888863 5888999888 4777889
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-----Cceeeccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-----ADQSSKTI 443 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~~i~df 443 (447)
+||+.+ |.+|.++..... ...++-.+...|+.|++.+|+++|+. +++||||||+|+++... ....+.||
T Consensus 98 iVM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~---G~iHRDiKp~N~~~g~~~~~~~~~~~llDf 171 (322)
T KOG1164|consen 98 IVMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSK---GFIHRDIKPENFVVGQSSRSEVRTLYLLDF 171 (322)
T ss_pred EEEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhc---CcccCCcCHHHeeecCCCCcccceEEEEec
Confidence 999977 779999775543 23488899999999999999999999 99999999999999865 35788888
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 172 G 172 (322)
T KOG1164|consen 172 G 172 (322)
T ss_pred C
Confidence 3
No 420
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.59 E-value=2e-15 Score=141.11 Aligned_cols=134 Identities=20% Similarity=0.293 Sum_probs=112.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCC--C----CccceeeEEecCCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--R----NLLRLYGFCTTVTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~----niv~l~~~~~~~~~ 366 (447)
+.+|.+...+|+|.||+|-++... ++..||||+++.... -....+-|++++.++.+ | -+|++.+++.-.++
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k--YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK--YREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH--HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 678889999999999999999854 478999999976432 23346778999998842 2 37888899999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
.++|+|.+ |-|+++++..... .+++...+..|+.|++++++|||+. +++|-||||+|||+-+.
T Consensus 166 iCivfell-G~S~~dFlk~N~y--~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss 228 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKENNY--IPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSS 228 (415)
T ss_pred eEEEEecc-ChhHHHHhccCCc--cccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEecc
Confidence 99999988 5699999988644 3578889999999999999999999 99999999999998543
No 421
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.58 E-value=1.6e-14 Score=133.51 Aligned_cols=132 Identities=17% Similarity=0.197 Sum_probs=100.8
Q ss_pred Cccc-cCCCceEEEEEeCCCcEEEEEEccccc------------ccccHHHHHHHHHHHhcCCCCCc--cceeeEEecCC
Q 013258 301 NILG-RGGFGKVYKGRLADGKLVAVKRLKEER------------TSGGELQFQTEVKIISMAVHRNL--LRLYGFCTTVT 365 (447)
Q Consensus 301 ~~lg-~G~~g~Vy~~~~~~~~~vavK~~~~~~------------~~~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~~~ 365 (447)
..|| .|+.|+||..+.. +..++||.+.... .......+.+|++++..++|++| ++.+++.....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5687 8999999999874 6788999874311 01122458899999999998885 66776644322
Q ss_pred ----ceEEEeecCCC-CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceee
Q 013258 366 ----EKLLVYPYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 366 ----~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
..++|+||+++ .+|.+++... .++. ....+++.++.+||+. +|+||||||+|||++.++.+++
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~-----~l~~----~~~~~i~~~l~~lH~~---GI~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEA-----PLSE----EQWQAIGQLIARFHDA---GVYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcC-----CCCH----HHHHHHHHHHHHHHHC---CCCCCCCCchhEEEcCCCCEEE
Confidence 23599999997 6898887542 1333 2367899999999999 9999999999999999999999
Q ss_pred ccccc
Q 013258 441 KTILR 445 (447)
Q Consensus 441 ~df~~ 445 (447)
+||-.
T Consensus 184 IDfg~ 188 (239)
T PRK01723 184 IDFDR 188 (239)
T ss_pred EECCC
Confidence 99964
No 422
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.55 E-value=4.9e-14 Score=135.42 Aligned_cols=143 Identities=34% Similarity=0.459 Sum_probs=121.8
Q ss_pred CCCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCC-CccceeeEEecCCceEEEeec
Q 013258 297 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHR-NLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~e~ 373 (447)
|...+.||.|+||.||++... ..+++|.+........ ...+.+|+.++..+.|+ +++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 455678999999999999976 7899999976554432 55799999999999988 799999999777778999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeeccccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTILR 445 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~~ 445 (447)
+.++++.+++...... ..+.......+..|++.++.|+|+. +++|||+||+||+++..+ .+++.||.-
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~---~~~hrd~kp~nil~~~~~~~~~l~dfg~ 148 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSK---GIIHRDIKPENILLDRDGRVVKLIDFGL 148 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeecCCCCeEEEeccCc
Confidence 9999999777654311 2477889999999999999999999 899999999999999998 799999964
No 423
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.50 E-value=3e-14 Score=137.76 Aligned_cols=146 Identities=19% Similarity=0.218 Sum_probs=121.8
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC------CCCccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV------HRNLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~------H~niv~l~~~~~~~~ 365 (447)
...+|.+....|+|-|+.|.+|... .|..||||+|+.... ..+.=+.|+++|.+++ --|+++++..|...+
T Consensus 430 LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~--M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hkn 507 (752)
T KOG0670|consen 430 LDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEV--MHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHKN 507 (752)
T ss_pred hcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchH--HhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhcc
Confidence 4467888888999999999999864 488999999975432 1234568999999886 347899999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
++|||+|-+. -+|.++|...+. ...|....+..++.|+.-||..|-.. +|+|.||||.|||+++.- ..||+||.
T Consensus 508 HLClVFE~Ls-lNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPDNiLVNE~k~iLKLCDfG 582 (752)
T KOG0670|consen 508 HLCLVFEPLS-LNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPDNILVNESKNILKLCDFG 582 (752)
T ss_pred eeEEEehhhh-chHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCccceEeccCcceeeeccCc
Confidence 9999999874 589999988643 34578889999999999999999987 999999999999999876 56999996
Q ss_pred c
Q 013258 445 R 445 (447)
Q Consensus 445 ~ 445 (447)
.
T Consensus 583 S 583 (752)
T KOG0670|consen 583 S 583 (752)
T ss_pred c
Confidence 5
No 424
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.50 E-value=2e-15 Score=126.35 Aligned_cols=131 Identities=29% Similarity=0.495 Sum_probs=120.3
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|.|++|.++ .+||.|..|.+|+.|++++|++. .+|..++++++|+.|+++-|++. .+|..|++++.|+.|||
T Consensus 33 s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldl 109 (264)
T KOG0617|consen 33 SNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDL 109 (264)
T ss_pred hhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhc
Confidence 57899999999998 78999999999999999999999 69999999999999999999998 89999999999999999
Q ss_pred cCccccc-cCchHHhhcccccccccccccccccCCCCCCCCcccccccccccccc
Q 013258 147 NNNSLSG-LIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLC 200 (447)
Q Consensus 147 ~~N~l~~-~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc 200 (447)
.+|++.. .+|..|.-+..|+.|+++.|.|.-.+|+.+.+..+..++...|..+.
T Consensus 110 tynnl~e~~lpgnff~m~tlralyl~dndfe~lp~dvg~lt~lqil~lrdndll~ 164 (264)
T KOG0617|consen 110 TYNNLNENSLPGNFFYMTTLRALYLGDNDFEILPPDVGKLTNLQILSLRDNDLLS 164 (264)
T ss_pred cccccccccCCcchhHHHHHHHHHhcCCCcccCChhhhhhcceeEEeeccCchhh
Confidence 9999964 57999999999999999999999999999999998888887775543
No 425
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=4.1e-14 Score=149.83 Aligned_cols=146 Identities=21% Similarity=0.254 Sum_probs=113.3
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCCc
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVTE 366 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~ 366 (447)
.++..+.|.+.+.||+|+||+||+|...+|+.||+|+=+....++- ---.+++.+++ -+-|..+...+.-.+.
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WEf----YI~~q~~~RLk~~~~~~~~~~~~a~~~~~~ 768 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWEF----YICLQVMERLKPQMLPSIMHISSAHVFQNA 768 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCceee----eehHHHHHhhchhhhcchHHHHHHHccCCc
Confidence 4455567888899999999999999987899999998776554432 11122334444 2344555555566778
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-------CCcee
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-------DADQS 439 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------~~~~~ 439 (447)
.++|+||.+.|+|.+++...+ ..+|.-.+.++.|+++-+++||.. +|||+||||+|.||.. ..-.+
T Consensus 769 S~lv~ey~~~Gtlld~~N~~~----~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~ 841 (974)
T KOG1166|consen 769 SVLVSEYSPYGTLLDLINTNK----VMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLY 841 (974)
T ss_pred ceeeeeccccccHHHhhccCC----CCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceE
Confidence 899999999999999998433 489999999999999999999999 9999999999999853 22478
Q ss_pred ecccccc
Q 013258 440 SKTILRR 446 (447)
Q Consensus 440 i~df~~~ 446 (447)
|.||-..
T Consensus 842 lIDfG~s 848 (974)
T KOG1166|consen 842 LIDFGRS 848 (974)
T ss_pred EEecccc
Confidence 8898654
No 426
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=2.3e-13 Score=136.60 Aligned_cols=136 Identities=22% Similarity=0.231 Sum_probs=96.2
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccc---------------------------------------cHHHHH
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG---------------------------------------GELQFQ 340 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~---------------------------------------~~~~~~ 340 (447)
.+.||+|++|+||+|++++|+.||||+.++..... .+.+|.
T Consensus 122 ~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~ 201 (437)
T TIGR01982 122 EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLR 201 (437)
T ss_pred CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHH
Confidence 37899999999999999999999999986542100 011255
Q ss_pred HHHHHHhcCC----CCCccceeeEEe-cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHH-HHhhhhc
Q 013258 341 TEVKIISMAV----HRNLLRLYGFCT-TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR-GLSYLHE 414 (447)
Q Consensus 341 ~E~~~l~~l~----H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~-gL~yLH~ 414 (447)
+|++.+.+++ |.+-+.+-.++. .....++||||++|++|.+........ . .+..++.+++. .+..+|.
T Consensus 202 ~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~---~---~~~~ia~~~~~~~l~ql~~ 275 (437)
T TIGR01982 202 REAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAG---L---DRKALAENLARSFLNQVLR 275 (437)
T ss_pred HHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcC---C---CHHHHHHHHHHHHHHHHHh
Confidence 5666665552 333333333332 244579999999999998876542111 2 23456666665 4678888
Q ss_pred CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 415 HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 415 ~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
. +++|+|+||.||++++++.+++.||-
T Consensus 276 ~---g~~H~D~hPgNilv~~~g~i~liDfG 302 (437)
T TIGR01982 276 D---GFFHADLHPGNIFVLKDGKIIALDFG 302 (437)
T ss_pred C---CceeCCCCcccEEECCCCcEEEEeCC
Confidence 8 99999999999999999999999985
No 427
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.34 E-value=2.2e-13 Score=121.98 Aligned_cols=137 Identities=25% Similarity=0.414 Sum_probs=113.6
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccc-cccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEE-RTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
.+|.+...|+.|+|+++.+ .+.+|+++.. .+....++|.+|.-.++-+.||||..++|.|.++.+..++..||+.|||
T Consensus 196 tkl~e~hsgelwrgrwqgn-divakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQGN-DIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCcccccccccCc-chhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 4578889999999999754 4555776432 2233345799999999999999999999999999999999999999999
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
+..|++... ...+-.++.+++.++|+|++|||+. .|-|.---|.+..|++|+|..++|+
T Consensus 275 ynvlhe~t~--vvvd~sqav~faldiargmaflhsl-ep~ipr~~lns~hvmidedltaris 333 (448)
T KOG0195|consen 275 YNVLHEQTS--VVVDHSQAVRFALDIARGMAFLHSL-EPMIPRFYLNSKHVMIDEDLTARIS 333 (448)
T ss_pred HHHHhcCcc--EEEecchHHHHHHHHHhhHHHHhhc-chhhhhhhcccceEEecchhhhhee
Confidence 999998643 3478889999999999999999997 4445555789999999999988875
No 428
>PLN03150 hypothetical protein; Provisional
Probab=99.33 E-value=1.7e-12 Score=136.17 Aligned_cols=91 Identities=41% Similarity=0.635 Sum_probs=88.2
Q ss_pred CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccc
Q 013258 92 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 171 (447)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls 171 (447)
.++.|+|++|.++|.+|..++.+++|+.|+|++|.+.|.+|+.++.+++|+.|+|++|+++|.+|..++++++|+.|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccccCCCC
Q 013258 172 NNRLSGPVPDN 182 (447)
Q Consensus 172 ~N~l~g~~p~~ 182 (447)
+|+++|.+|..
T Consensus 499 ~N~l~g~iP~~ 509 (623)
T PLN03150 499 GNSLSGRVPAA 509 (623)
T ss_pred CCcccccCChH
Confidence 99999999975
No 429
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.32 E-value=1.3e-12 Score=132.75 Aligned_cols=139 Identities=21% Similarity=0.215 Sum_probs=89.4
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-CcEEEEEEccccccc---------------------c------------------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTS---------------------G------------------ 334 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~---------------------~------------------ 334 (447)
..|+. +.||+|++|+||+|++++ |+.||||+.++.... .
T Consensus 120 ~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 120 DDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred HhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 34665 789999999999999877 999999999754210 0
Q ss_pred cHHHHHHHHHHHhcCC----CCCccceeeEEec-CCceEEEeecCCCCChhhH--hhccCCCCCCCChHHHHHHHHHHHH
Q 013258 335 GELQFQTEVKIISMAV----HRNLLRLYGFCTT-VTEKLLVYPYMTNGSVASR--LRERQSSLPPLDWPTRKKIALGSAR 407 (447)
Q Consensus 335 ~~~~~~~E~~~l~~l~----H~niv~l~~~~~~-~~~~~lv~e~~~~gsL~~~--l~~~~~~~~~l~~~~~~~i~~~ia~ 407 (447)
.+.++.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.+.+. +...+.....+.......++.|+
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi-- 276 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV-- 276 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH--
Confidence 0112455665555443 4444444444433 4567899999999999764 22221100011122222233333
Q ss_pred HHhhhhcCCCCCeeecCCCCCceeeCCCC----ceeecccc
Q 013258 408 GLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTIL 444 (447)
Q Consensus 408 gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~~i~df~ 444 (447)
+.. +++|+|+||.||+++.++ ..++.||-
T Consensus 277 -----f~~---GffHaDpHPGNIlv~~~g~~~~~i~llDFG 309 (537)
T PRK04750 277 -----FRD---GFFHADMHPGNIFVSYDPPENPRYIALDFG 309 (537)
T ss_pred -----HhC---CeeeCCCChHHeEEecCCCCCCeEEEEecc
Confidence 345 899999999999999988 89999984
No 430
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.30 E-value=1e-11 Score=108.65 Aligned_cols=126 Identities=20% Similarity=0.179 Sum_probs=92.6
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCcc-ceeeEEecCCceEEEeecCCCCCh
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLL-RLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv-~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
+.++.|.++.||+++.. ++.|++|....... ....+..|++.+..+.+.+++ +++.+. ....++||||+++.++
T Consensus 4 ~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~--~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 4 SPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE--LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eecCCcccCceEEEEEC-CeEEEEEeCCCCcc--cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 56889999999999875 77899998754421 123467899999888765554 455443 3346899999999887
Q ss_pred hhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC--CCCeeecCCCCCceeeCCCCceeecccc
Q 013258 380 ASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--DPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 380 ~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
... . . ....+..+++++|+.||... ...++|+|++|.||+++ ++.+++.||.
T Consensus 79 ~~~--~-------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~ 132 (170)
T cd05151 79 LTE--D-------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWE 132 (170)
T ss_pred ccc--c-------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecc
Confidence 543 0 0 11345678999999999972 12369999999999999 6678999985
No 431
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.22 E-value=5.6e-12 Score=136.97 Aligned_cols=89 Identities=11% Similarity=0.019 Sum_probs=69.8
Q ss_pred cCCC-CCccceeeEEe-------cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC
Q 013258 348 MAVH-RNLLRLYGFCT-------TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK 419 (447)
Q Consensus 348 ~l~H-~niv~l~~~~~-------~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ 419 (447)
.++| +||.++++++. ..+..+.++||+ +++|.++|.... ..+++.++..++.||++||+|||++ +
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---g 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPD---RSVDAFECFHVFRQIVEIVNAAHSQ---G 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhccc---ccccHHHHHHHHHHHHHHHHHHHhC---C
Confidence 3456 58888888772 234567888887 569999997532 2489999999999999999999999 9
Q ss_pred eeecCCCCCceeeCCCCceeeccc
Q 013258 420 IIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 420 ivHrDlkp~NILl~~~~~~~i~df 443 (447)
|+||||||+||||+..+..|++||
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~ 124 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIES 124 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeec
Confidence 999999999999966555444444
No 432
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.21 E-value=4.2e-13 Score=112.56 Aligned_cols=129 Identities=25% Similarity=0.452 Sum_probs=103.1
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccc-ccCCccccCCCCCCeeeC
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN-GTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-g~~p~~~~~l~~L~~L~l 146 (447)
++..|++.+|++. .+|..++.|+.|+.|+++-|++. ..|..|+.++.|+.|||+.|++. ..+|..|..++.|+.|+|
T Consensus 57 nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levldltynnl~e~~lpgnff~m~tlralyl 134 (264)
T KOG0617|consen 57 NLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYL 134 (264)
T ss_pred hhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhhccccccccccCCcchhHHHHHHHHHh
Confidence 5777889999987 68888999999999999999998 78999999999999999998885 347777777777888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNL 199 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~l 199 (447)
++|.+. .+|..++.+++|+.|.+..|.+-..+-+.+.+.+++.+.++||...
T Consensus 135 ~dndfe-~lp~dvg~lt~lqil~lrdndll~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 135 GDNDFE-ILPPDVGKLTNLQILSLRDNDLLSLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred cCCCcc-cCChhhhhhcceeEEeeccCchhhCcHHHHHHHHHHHHhcccceee
Confidence 888886 5677778888888888888777655555666777777777777543
No 433
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.19 E-value=1.8e-10 Score=105.29 Aligned_cols=140 Identities=16% Similarity=0.217 Sum_probs=105.6
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC--CccceeeEEecCC---ceEEEeecCC
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR--NLLRLYGFCTTVT---EKLLVYPYMT 375 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~~~---~~~lv~e~~~ 375 (447)
+.++.|.++.||++...+|+.+++|............++..|++++..+++. ++.+++.+..... ..+++|||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 6689999999999988667889999875443222334688999999998764 4577777766532 5689999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC---------------------------------------
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--------------------------------------- 416 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------- 416 (447)
+.++.+.+.. ..++......++.+++++|.+||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9888766531 12566777788888888888888521
Q ss_pred --------------CCCeeecCCCCCceeeCC--CCceeeccccc
Q 013258 417 --------------DPKIIHRDVKAANILLDE--DADQSSKTILR 445 (447)
Q Consensus 417 --------------~~~ivHrDlkp~NILl~~--~~~~~i~df~~ 445 (447)
...++|+|++|.||++++ ++.+.+.||..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~ 203 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWEL 203 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEeccc
Confidence 245799999999999998 56678899853
No 434
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.16 E-value=4.7e-12 Score=124.42 Aligned_cols=130 Identities=27% Similarity=0.276 Sum_probs=110.4
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.+..|+|+.|+++..-...+..|+.|+.|+||+|.+....++.|...++|++|+|++|+++..-+..|..|..|+.|+|+
T Consensus 270 kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs 349 (873)
T KOG4194|consen 270 KMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLS 349 (873)
T ss_pred ccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhccc
Confidence 57889999999987777788999999999999999999999999999999999999999997777788899999999999
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCC----CCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG----SFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~----~~~~~~~~~~~~n~ 197 (447)
.|.+...-..+|..+++|+.|||++|.+++.|-+.. .+..++.+.+.||+
T Consensus 350 ~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNq 403 (873)
T KOG4194|consen 350 HNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQ 403 (873)
T ss_pred ccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCce
Confidence 999987777788889999999999999988776531 24445555555554
No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.16 E-value=1.6e-11 Score=127.45 Aligned_cols=140 Identities=21% Similarity=0.244 Sum_probs=106.3
Q ss_pred CCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHH----HHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 298 SNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGEL----QFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~----~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
...+++|.|++|.|+..... .....+.|..+... ...... .+..|..+-..++|+|++..+..+.+.....-+|
T Consensus 321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m 400 (601)
T KOG0590|consen 321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM 400 (601)
T ss_pred CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence 34678999999977777633 34444444332100 111111 2556777778899999988888777776666669
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
|||++ +|+..+.... .+.-.++..+..|+..|+.|+|+. +|.|||+|++|++++.++..||.||..
T Consensus 401 E~~~~-Dlf~~~~~~~----~~~~~e~~c~fKqL~~Gv~y~h~~---GiahrdlK~enll~~~~g~lki~Dfg~ 466 (601)
T KOG0590|consen 401 EYCPY-DLFSLVMSNG----KLTPLEADCFFKQLLRGVKYLHSM---GLAHRDLKLENLLVTENGILKIIDFGA 466 (601)
T ss_pred hcccH-HHHHHHhccc----ccchhhhhHHHHHHHHHHHHHHhc---CceeccCccccEEEecCCceEEeecCc
Confidence 99999 9999987642 266778889999999999999999 999999999999999999999999964
No 436
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.14 E-value=4.1e-10 Score=99.88 Aligned_cols=133 Identities=14% Similarity=0.157 Sum_probs=94.8
Q ss_pred CccccCCCceEEEEEeCC-------CcEEEEEEcccccc-----------c----------ccHHH----HHHHHHHHhc
Q 013258 301 NILGRGGFGKVYKGRLAD-------GKLVAVKRLKEERT-----------S----------GGELQ----FQTEVKIISM 348 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-------~~~vavK~~~~~~~-----------~----------~~~~~----~~~E~~~l~~ 348 (447)
..||.|.=+.||.|...+ +..+|||+.+.... . ..... .++|.+.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998543 47899998753210 0 00112 2379999988
Q ss_pred CCC--CCccceeeEEecCCceEEEeecCCCCChhh-HhhccCCCCCCCChHHHHHHHHHHHHHHhhh-hcCCCCCeeecC
Q 013258 349 AVH--RNLLRLYGFCTTVTEKLLVYPYMTNGSVAS-RLRERQSSLPPLDWPTRKKIALGSARGLSYL-HEHCDPKIIHRD 424 (447)
Q Consensus 349 l~H--~niv~l~~~~~~~~~~~lv~e~~~~gsL~~-~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrD 424 (447)
+.. -++.+.+++ ...++||||+.+..+.. .+++. .++......+..+++.+|.++ |.. +|||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~-----~~~~~~~~~i~~~i~~~l~~l~H~~---glVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA-----KLNDEEMKNAYYQVLSMMKQLYKEC---NLVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc-----ccCHHHHHHHHHHHHHHHHHHHHhC---CeecCC
Confidence 864 456666654 56789999997654422 23221 134455667789999999999 777 999999
Q ss_pred CCCCceeeCCCCceeecccccc
Q 013258 425 VKAANILLDEDADQSSKTILRR 446 (447)
Q Consensus 425 lkp~NILl~~~~~~~i~df~~~ 446 (447)
|++.|||++ ++.+.+.||-+.
T Consensus 151 Ls~~NIL~~-~~~v~iIDF~qa 171 (197)
T cd05146 151 LSEYNMLWH-DGKVWFIDVSQS 171 (197)
T ss_pred CCHHHEEEE-CCcEEEEECCCc
Confidence 999999997 467999999764
No 437
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.12 E-value=1.1e-11 Score=129.78 Aligned_cols=140 Identities=25% Similarity=0.258 Sum_probs=112.4
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHH---HHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQ---TEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++...+.||++.|=+|.+|+.+.|. |.||++-+.........|. +|++ ....+|||.+++.-+-......|||-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 4566788999999999999987776 8889874433233333343 4444 556689999998877777777899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
|..+ +|++.|..+ +.+...+.+-|+.|++.|+.-+|.. +|+|+|||.+||||++-..+.++||..
T Consensus 102 yvkh-nLyDRlSTR----PFL~~iEKkWiaFQLL~al~qcH~~---gVcHGDIKsENILiTSWNW~~LtDFAs 166 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTR----PFLVLIEKKWIAFQLLKALSQCHKL---GVCHGDIKSENILITSWNWLYLTDFAS 166 (1431)
T ss_pred HHhh-hhhhhhccc----hHHHHHHHHHHHHHHHHHHHHHHHc---CccccccccceEEEeeechhhhhcccc
Confidence 9965 888888654 2366777888999999999999999 999999999999999999999999964
No 438
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.11 E-value=4.7e-12 Score=119.33 Aligned_cols=124 Identities=31% Similarity=0.446 Sum_probs=99.4
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCcccc-CCCCCCeeeCc
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLA-NLKQLKYLRLN 147 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-~l~~L~~L~l~ 147 (447)
+..||...|-+ +++|++++.|..|.-|+|..|.+. .+| +|.++..|+.|.++.|++. .+|.... +++++..|||.
T Consensus 185 L~~ld~~~N~L-~tlP~~lg~l~~L~~LyL~~Nki~-~lP-ef~gcs~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLR 260 (565)
T KOG0472|consen 185 LKHLDCNSNLL-ETLPPELGGLESLELLYLRRNKIR-FLP-EFPGCSLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLR 260 (565)
T ss_pred HHhcccchhhh-hcCChhhcchhhhHHHHhhhcccc-cCC-CCCccHHHHHHHhcccHHH-hhHHHHhcccccceeeecc
Confidence 34445444444 467777777777777778777777 566 6777777888888888876 6777665 89999999999
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLN 198 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 198 (447)
+|+++ ..|..+.-+++|+.||+|+|.+++.++.-|.+ .+..+.+.||+.
T Consensus 261 dNklk-e~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl-hL~~L~leGNPl 309 (565)
T KOG0472|consen 261 DNKLK-EVPDEICLLRSLERLDLSNNDISSLPYSLGNL-HLKFLALEGNPL 309 (565)
T ss_pred ccccc-cCchHHHHhhhhhhhcccCCccccCCcccccc-eeeehhhcCCch
Confidence 99998 68999999999999999999999999988877 777888888873
No 439
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.10 E-value=1.6e-11 Score=122.32 Aligned_cols=138 Identities=25% Similarity=0.260 Sum_probs=113.5
Q ss_pred ccccCCCceEEEEE----eCCCcEEEEEEccccccccc-HHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeecCC
Q 013258 302 ILGRGGFGKVYKGR----LADGKLVAVKRLKEERTSGG-ELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~----~~~~~~vavK~~~~~~~~~~-~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
++|+|+||.|+.++ ...|..+|+|.++....... ......|..++..++ ||.+|++...++.+...+++++|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998764 23478899998865432221 113556777888887 9999999999999999999999999
Q ss_pred CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccccc
Q 013258 376 NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILRR 446 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~~ 446 (447)
+|++...+..... ++......+...++-+++++|.. +|+|||+|++||+++.+|.+++.||..+
T Consensus 81 gg~lft~l~~~~~----f~~~~~~~~~aelaLald~lh~l---~iiyrd~k~enilld~~Ghi~~tdfgls 144 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM----FDELDVAFYLAELALALDHLHKL---GIAYRDYKLENVLLLLEGHIKLTDFGLS 144 (612)
T ss_pred cchhhhccccCCc----hHHHHHHHHHHHHHHHHhhcchh---HHHHhcccccceeecccCccccCCchhh
Confidence 9999988876533 66777778888899999999999 9999999999999999999999999765
No 440
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.09 E-value=6.3e-11 Score=111.79 Aligned_cols=87 Identities=25% Similarity=0.332 Sum_probs=67.0
Q ss_pred CCCCCccceeeEEec---------------------------CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHH
Q 013258 349 AVHRNLLRLYGFCTT---------------------------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKI 401 (447)
Q Consensus 349 l~H~niv~l~~~~~~---------------------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i 401 (447)
-+|||||++.++|.+ +..+|+||.-+. .+|.+++..+. .+...+.-|
T Consensus 273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~~~-----~s~r~~~~~ 346 (598)
T KOG4158|consen 273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWTRH-----RSYRTGRVI 346 (598)
T ss_pred CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhcCC-----CchHHHHHH
Confidence 369999999987743 124578887664 38888887653 455667788
Q ss_pred HHHHHHHHhhhhcCCCCCeeecCCCCCceeeC--CCC--ceeecccc
Q 013258 402 ALGSARGLSYLHEHCDPKIIHRDVKAANILLD--EDA--DQSSKTIL 444 (447)
Q Consensus 402 ~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~--~~~i~df~ 444 (447)
..|+++|+.|||.+ +|.|||+|++|||+. +|. ..-|+||-
T Consensus 347 laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFG 390 (598)
T KOG4158|consen 347 LAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFG 390 (598)
T ss_pred HHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccc
Confidence 89999999999999 999999999999985 333 34677874
No 441
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.03 E-value=1.1e-09 Score=102.44 Aligned_cols=141 Identities=23% Similarity=0.342 Sum_probs=88.6
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCC----------CCccceeeEEe----
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVH----------RNLLRLYGFCT---- 362 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H----------~niv~l~~~~~---- 362 (447)
.+.||.|+++.||.++.. +++.+|||+..... ......++.+|.-....+.+ -.++--++...
T Consensus 17 ~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~ 96 (288)
T PF14531_consen 17 GRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGK 96 (288)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS
T ss_pred ccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCC
Confidence 478999999999999975 48999999874332 22233456666655544332 12221222211
Q ss_pred -----cCC--------ceEEEeecCCCCChhhHhhc---cCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCC
Q 013258 363 -----TVT--------EKLLVYPYMTNGSVASRLRE---RQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVK 426 (447)
Q Consensus 363 -----~~~--------~~~lv~e~~~~gsL~~~l~~---~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 426 (447)
... ..+++|+-+ .+||.+++.. .......+....++.+..|+.+.+++||+. ++||+|||
T Consensus 97 ~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~---GlVHgdi~ 172 (288)
T PF14531_consen 97 PPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSY---GLVHGDIK 172 (288)
T ss_dssp -SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEEST-S
T ss_pred CcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhc---ceEecccc
Confidence 111 235677766 4688877543 222111233445667779999999999999 99999999
Q ss_pred CCceeeCCCCceeecccc
Q 013258 427 AANILLDEDADQSSKTIL 444 (447)
Q Consensus 427 p~NILl~~~~~~~i~df~ 444 (447)
|+|++++++|.+.++||.
T Consensus 173 ~~nfll~~~G~v~Lg~F~ 190 (288)
T PF14531_consen 173 PENFLLDQDGGVFLGDFS 190 (288)
T ss_dssp GGGEEE-TTS-EEE--GG
T ss_pred eeeEEEcCCCCEEEcChH
Confidence 999999999999999985
No 442
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.02 E-value=2.1e-11 Score=114.98 Aligned_cols=129 Identities=31% Similarity=0.509 Sum_probs=101.0
Q ss_pred CEEEEEcCCCCcc-----------------------ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 68 SVTRVDLGNAALS-----------------------GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 68 ~v~~l~L~~~~l~-----------------------g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
.|+.++++.|++. +.+|..++.+++|+.|+|++|.+. .+|.+++.+..|+.||+|.
T Consensus 389 ~Vt~VnfskNqL~elPk~L~~lkelvT~l~lsnn~isfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~ 467 (565)
T KOG0472|consen 389 IVTSVNFSKNQLCELPKRLVELKELVTDLVLSNNKISFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSF 467 (565)
T ss_pred ceEEEecccchHhhhhhhhHHHHHHHHHHHhhcCccccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccc
Confidence 4888888877654 345667788888888888888887 6888888888888888888
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccc
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLN 198 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 198 (447)
|+|. .+|..+..+..++.+-.++|++....|+.+.++.+|..||+.+|.+...+|..|.+.+++.+.+.||+.
T Consensus 468 NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 468 NRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred cccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEecCCcc
Confidence 8887 677777777777777667777776666668888888888888888888888778888888887777753
No 443
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=99.01 E-value=4e-11 Score=118.03 Aligned_cols=134 Identities=25% Similarity=0.340 Sum_probs=84.5
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCc---cccCCCCCCee
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD---TLANLKQLKYL 144 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~---~~~~l~~L~~L 144 (447)
++..|||++|+++..-+.++..|..|+.|+|+.|+++..--..|..+++|+.|||++|.+++.+.+ .|..|++|+.|
T Consensus 318 kL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL 397 (873)
T KOG4194|consen 318 KLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKL 397 (873)
T ss_pred cceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhe
Confidence 456666666666655555666666666666666666654445566667777777777777666554 35567777777
Q ss_pred eCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccC
Q 013258 145 RLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 145 ~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~ 201 (447)
+|.+|++..+.-.+|..+.+|+.|||.+|.+...-|+...--.+..+.++....+|.
T Consensus 398 ~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk~Lv~nSssflCD 454 (873)
T KOG4194|consen 398 RLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELKELVMNSSSFLCD 454 (873)
T ss_pred eecCceeeecchhhhccCcccceecCCCCcceeecccccccchhhhhhhcccceEEe
Confidence 777777776555677777778888888877765544432111344444444555554
No 444
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.96 E-value=8e-11 Score=116.73 Aligned_cols=106 Identities=31% Similarity=0.502 Sum_probs=84.4
Q ss_pred CEEEEEcCCCCcc-ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCcc-ccCCCCCCeee
Q 013258 68 SVTRVDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLKYLR 145 (447)
Q Consensus 68 ~v~~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~ 145 (447)
++.++++..|++. ..||+.|..|..|+.||||.|++. ..|..+.+-+++-+|+||+|++. .||.. +.+|+.|-+||
T Consensus 79 ~LRsv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~Ie-tIPn~lfinLtDLLfLD 156 (1255)
T KOG0444|consen 79 RLRSVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIE-TIPNSLFINLTDLLFLD 156 (1255)
T ss_pred hhHHHhhhccccccCCCCchhcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccc-cCCchHHHhhHhHhhhc
Confidence 4556667767665 357888888888888888888888 68888888888888888888887 67765 46888888888
Q ss_pred CcCccccccCchHHhhccccccccccccccc
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
||+|++. .+|+.+..+..|+.|++|+|.+.
T Consensus 157 LS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~ 186 (1255)
T KOG0444|consen 157 LSNNRLE-MLPPQIRRLSMLQTLKLSNNPLN 186 (1255)
T ss_pred cccchhh-hcCHHHHHHhhhhhhhcCCChhh
Confidence 8888887 46667788888888888888875
No 445
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.94 E-value=9.3e-11 Score=121.12 Aligned_cols=127 Identities=33% Similarity=0.459 Sum_probs=107.8
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.+..|.|.+|.++...-|-+.++.+|+.|+|++|+|.......+.++..|+.|+||+|+|+ .+|+.+.++..|++|...
T Consensus 360 ~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ah 438 (1081)
T KOG0618|consen 360 ALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAH 438 (1081)
T ss_pred HHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhc
Confidence 4677889999999988888999999999999999998544556788999999999999998 799999999999999999
Q ss_pred CccccccCchHHhhccccccccccccccc-ccCCCCCCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLS-GPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~-g~~p~~~~~~~~~~~~~~~n~ 197 (447)
+|++. ..| .+..++.|+.+|+|.|+++ +.+|.......++.+++.||.
T Consensus 439 sN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 439 SNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNT 487 (1081)
T ss_pred CCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCc
Confidence 99997 466 7889999999999999998 445554444667777788876
No 446
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=98.93 E-value=1.2e-10 Score=115.41 Aligned_cols=126 Identities=27% Similarity=0.406 Sum_probs=92.9
Q ss_pred EEEEEcCCCCcc-ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 69 VTRVDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 69 v~~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+..|++++.+-+ ..+|.++..|.+|..+|||.|++. ..|+.+.++++|+.|+||+|+++ .+-...+.+.+|++|+||
T Consensus 199 L~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlS 276 (1255)
T KOG0444|consen 199 LSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLS 276 (1255)
T ss_pred hhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccc
Confidence 344444443322 457888888888888888888888 68888888888888888888887 566666777888888888
Q ss_pred CccccccCchHHhhccccccccccccccc--ccCCCCCCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLS--GPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~--g~~p~~~~~~~~~~~~~~~n~ 197 (447)
.|+++ .+|+++..++.|+.|.+.+|+++ |.+...|.+.++.....++|.
T Consensus 277 rNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~ 327 (1255)
T KOG0444|consen 277 RNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNK 327 (1255)
T ss_pred cchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccc
Confidence 88887 57888888888888888888775 544445666666655555553
No 447
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.90 E-value=1.4e-09 Score=94.69 Aligned_cols=105 Identities=32% Similarity=0.519 Sum_probs=37.7
Q ss_pred CEEEEEcCCCCcccccccccc-CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccc-cCCCCCCeee
Q 013258 68 SVTRVDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTL-ANLKQLKYLR 145 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~ 145 (447)
+++.|+|.+|.++- + +.++ .+.+|+.|+|++|.++. ++ .+..++.|+.|++++|+++ .+++.+ ..+++|+.|+
T Consensus 20 ~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~-l~-~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITK-LE-GLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS----S-CHHHHHH-TT--EEE
T ss_pred cccccccccccccc-c-cchhhhhcCCCEEECCCCCCcc-cc-CccChhhhhhcccCCCCCC-ccccchHHhCCcCCEEE
Confidence 46778888888764 2 3455 47788888888888874 43 4677888888888888887 455444 3578888888
Q ss_pred CcCccccccC-chHHhhcccccccccccccccc
Q 013258 146 LNNNSLSGLI-PTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 146 l~~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~g 177 (447)
|++|++...- -..+..+++|+.|++.+|+++.
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~ 127 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGNPVCE 127 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-GGGG
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCCcccc
Confidence 8888886421 1456677778888888887763
No 448
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.85 E-value=1.9e-09 Score=77.10 Aligned_cols=60 Identities=43% Similarity=0.661 Sum_probs=32.9
Q ss_pred CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccc
Q 013258 92 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 151 (447)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 151 (447)
+|++|++++|+++...+..|.++++|++|++++|+++...|..|.++++|++|++++|++
T Consensus 2 ~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 2 NLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred cCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 455555555555543334555555555555555555544444555555555555555543
No 449
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.84 E-value=3.1e-08 Score=92.77 Aligned_cols=139 Identities=16% Similarity=0.110 Sum_probs=96.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEccccccc----------ccHHHHHHHHHHHhcCCCCCc--cceeeEEec-----
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTS----------GGELQFQTEVKIISMAVHRNL--LRLYGFCTT----- 363 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~H~ni--v~l~~~~~~----- 363 (447)
+.+-+.....|++..+ +|+.|.||........ .....+.+|...+..+...+| ++.+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4444444445777766 5778999976432210 111247889998888854444 445556543
Q ss_pred CCceEEEeecCCCC-ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-------C
Q 013258 364 VTEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-------D 435 (447)
Q Consensus 364 ~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------~ 435 (447)
....++|+|++++- +|.+++..... ...+......++.+++..+.-||.. +|+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~~--~~~~~~~~~~ll~~la~~i~~LH~~---Gi~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWAT--NPPDPRLKRMLIKRVATMVRDMHAA---GINHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---cCccCCCChhhEEEeccccCCCCC
Confidence 23478999999876 78888864321 1244566778999999999999999 9999999999999985 4
Q ss_pred Cceeeccccc
Q 013258 436 ADQSSKTILR 445 (447)
Q Consensus 436 ~~~~i~df~~ 445 (447)
..+.+.||-+
T Consensus 182 ~~~~LIDl~r 191 (268)
T PRK15123 182 LKLSVIDLHR 191 (268)
T ss_pred ceEEEEECCc
Confidence 5788888863
No 450
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.83 E-value=1.9e-09 Score=77.16 Aligned_cols=61 Identities=41% Similarity=0.633 Sum_probs=56.3
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccc
Q 013258 115 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRL 175 (447)
Q Consensus 115 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 175 (447)
++|+.|++++|+++...+..|..+++|++|++++|+++...|..|..+++|+.|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5789999999999966567899999999999999999988889999999999999999986
No 451
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.81 E-value=3.2e-08 Score=87.45 Aligned_cols=123 Identities=21% Similarity=0.271 Sum_probs=79.6
Q ss_pred eEEEEEeCCCcEEEEEEccccccc------------c---------c----HHHHHHHHHHHhcCCCC--CccceeeEEe
Q 013258 310 KVYKGRLADGKLVAVKRLKEERTS------------G---------G----ELQFQTEVKIISMAVHR--NLLRLYGFCT 362 (447)
Q Consensus 310 ~Vy~~~~~~~~~vavK~~~~~~~~------------~---------~----~~~~~~E~~~l~~l~H~--niv~l~~~~~ 362 (447)
.||.|...+|..+|||+.+..... . . .....+|.+.|.++... ++.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 389999888999999987642110 0 0 12367899999999766 46666654
Q ss_pred cCCceEEEeecCC--CCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhh-hcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 363 TVTEKLLVYPYMT--NGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYL-HEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 363 ~~~~~~lv~e~~~--~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yL-H~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
....+||||++ +..+.. +.... ++......+..+++..+..+ |.. +|+|+|+.+.|||++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~~-----~~~~~~~~~~~~il~~~~~~~~~~---givHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDVD-----LSPEEPKELLEEILEEIIKMLHKA---GIVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHCG-----GGGSTHHHHHHHHHHHHHHHHHCT---TEEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhh-HHhcc-----ccchhHHHHHHHHHHHHHHHHHhc---CceecCCChhhEEeecc-eEE
Confidence 24579999998 544443 33321 12334566777777766664 677 99999999999999988 899
Q ss_pred ecccccc
Q 013258 440 SKTILRR 446 (447)
Q Consensus 440 i~df~~~ 446 (447)
+.||-+.
T Consensus 147 iIDf~qa 153 (188)
T PF01163_consen 147 IIDFGQA 153 (188)
T ss_dssp E--GTTE
T ss_pred EEecCcc
Confidence 9999764
No 452
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.78 E-value=6.5e-08 Score=83.31 Aligned_cols=128 Identities=18% Similarity=0.222 Sum_probs=93.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEc-ccccccc------cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRL-KEERTSG------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~~~------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
..+++|+=+.+|.+.+. |..+.+|.- ++..... ...+..+|++++.+++--.|..-.=+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 45789999999999764 444666643 2221111 122467899999988766665555566788889999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|-.|.+.+... +..++..+-.-+.-||.. +|||+||.++||++..+. +.+.||-
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~---givHGDLTtsNiIl~~~~-i~~IDfG 136 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKA---GIVHGDLTTSNIILSGGR-IYFIDFG 136 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhc---CeecCCCccceEEEeCCc-EEEEECC
Confidence 9998888888653 244566666677789999 999999999999998776 7777773
No 453
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.78 E-value=8e-08 Score=82.43 Aligned_cols=140 Identities=14% Similarity=0.168 Sum_probs=98.5
Q ss_pred CCCccccCCCceEEEEEeCCCcEEEEEEc-ccccc------cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 299 NKNILGRGGFGKVYKGRLADGKLVAVKRL-KEERT------SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 299 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~-~~~~~------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
....+-+|+-+.|+++.+. |+...||.- .+... .....+..+|++.+.+++--.|.--.=++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4577889999999999984 677667643 22111 111335788999999887655554444556666678999
Q ss_pred ecCCC-CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecccc
Q 013258 372 PYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTIL 444 (447)
Q Consensus 372 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~df~ 444 (447)
||+++ -++.+++....... -.......++..|-+.+.-||.+ +|||+||..+||++.++++ +.+.||.
T Consensus 90 E~~~g~~~vk~~i~~~~~~~--~~d~~~~~~~~~iG~~igklH~n---diiHGDLTTSNill~~~~~~~~~~lIdfg 161 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDE--SEDEGLAELARRIGELIGKLHDN---DIIHGDLTTSNILLRSDGNQITPILIDFG 161 (229)
T ss_pred EeccchhHHHHHHHHHccCc--ccchhHHHHHHHHHHHHHHhhhC---CeecccccccceEEecCCCcCceEEEeec
Confidence 99976 36777777643211 11222267788888899999999 9999999999999988774 4577774
No 454
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.77 E-value=1.5e-09 Score=98.99 Aligned_cols=123 Identities=25% Similarity=0.344 Sum_probs=87.1
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
++.|||++|.++ .+.+++.-++.++.|++|+|.+.. +. .+..|.+|+.||||+|.++ .+-.+-..+.+.+.|.|+.
T Consensus 286 LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La~ 361 (490)
T KOG1259|consen 286 LTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLAQ 361 (490)
T ss_pred hhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehhh
Confidence 567888888776 566777777888888888888872 33 3777888888888888886 4444445567778888888
Q ss_pred ccccccCchHHhhcccccccccccccccc--cCCCCCCCCccccccccccc
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSG--PVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~n~ 197 (447)
|.+.. -+.+..+-+|..||+++|++.. .+-..|.+..+..+.+.+|+
T Consensus 362 N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NP 410 (490)
T KOG1259|consen 362 NKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNP 410 (490)
T ss_pred hhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCC
Confidence 88753 2557777888888888888863 23344556666666666665
No 455
>PF08263 LRRNT_2: Leucine rich repeat N-terminal domain; InterPro: IPR013210 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. This domain is often found at the N terminus of tandem leucine rich repeats.; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1OGQ_A.
Probab=98.76 E-value=1e-08 Score=67.44 Aligned_cols=40 Identities=38% Similarity=0.844 Sum_probs=30.9
Q ss_pred hHHHHHHHHHHHHCC-CCCCCCCCCCCCC-CCCCccceeEeC
Q 013258 25 NAEVDALYIFKSKLQ-DPNNSLQSWDNLP-GNLCTWFHITCN 64 (447)
Q Consensus 25 ~~~~~~l~~~~~~~~-~~~~~l~~w~~~~-~~~c~w~gv~c~ 64 (447)
++|++||+.||+++. +|.+.+.+|+..+ .+||+|.||+|+
T Consensus 2 ~~d~~aLl~~k~~l~~~~~~~l~~W~~~~~~~~C~W~GV~Cd 43 (43)
T PF08263_consen 2 NQDRQALLAFKKSLNNDPSGVLSSWNPSSDSDPCSWSGVTCD 43 (43)
T ss_dssp HHHHHHHHHHHHCTT-SC-CCCTT--TT--S-CCCSTTEEE-
T ss_pred cHHHHHHHHHHHhcccccCcccccCCCcCCCCCeeeccEEeC
Confidence 579999999999998 5778999998764 799999999995
No 456
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.72 E-value=1.7e-08 Score=100.70 Aligned_cols=93 Identities=24% Similarity=0.334 Sum_probs=84.7
Q ss_pred HhcCCCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCe-eecC
Q 013258 346 ISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI-IHRD 424 (447)
Q Consensus 346 l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i-vHrD 424 (447)
|+.+.|.|+.+++|.+..+...+.|.+||..|+|.+.+.... ..++|.-...++.+++.||+|+|.- +| .|+.
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~---~~~d~~F~~s~~rdi~~Gl~ylh~s---~i~~hg~ 74 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNED---IKLDYFFILSFIRDISKGLAYLHNS---PIGYHGA 74 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccc---cCccHHHHHHHHHHHHHHHHHHhcC---cceeeee
Confidence 356789999999999999999999999999999999998743 2489999999999999999999986 55 9999
Q ss_pred CCCCceeeCCCCceeecccc
Q 013258 425 VKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 425 lkp~NILl~~~~~~~i~df~ 444 (447)
++++|+++|.....|++||.
T Consensus 75 l~s~nClvd~~w~lklt~~G 94 (484)
T KOG1023|consen 75 LKSSNCLVDSRWVLKLTDFG 94 (484)
T ss_pred eccccceeeeeEEEEechhh
Confidence 99999999999999999985
No 457
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=98.71 E-value=8e-09 Score=89.91 Aligned_cols=106 Identities=36% Similarity=0.471 Sum_probs=36.4
Q ss_pred ccCCCCCCEEECCCCccCCCCChhhc-CCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHH-hhccc
Q 013258 87 LGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSL-TTITS 164 (447)
Q Consensus 87 l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~-~~l~~ 164 (447)
+.+...++.|+|++|.++. | +.++ .+.+|+.|+|++|.++ .++ .+..++.|+.|++++|.++. ++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~-~l~-~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQIT-KLE-GLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S---T-T----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred ccccccccccccccccccc-c-cchhhhhcCCCEEECCCCCCc-ccc-CccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 4556678999999999984 4 3566 5889999999999998 454 57889999999999999985 44445 46899
Q ss_pred cccccccccccccc--CCCCCCCCccccccccccc
Q 013258 165 LNILDLSNNRLSGP--VPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 165 L~~l~ls~N~l~g~--~p~~~~~~~~~~~~~~~n~ 197 (447)
|+.|++++|++... +-.-..+..+..+++.+|+
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NP 124 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNP 124 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-G
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCc
Confidence 99999999999742 1111234556666777775
No 458
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.70 E-value=2.5e-09 Score=101.04 Aligned_cols=135 Identities=24% Similarity=0.334 Sum_probs=110.3
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC-CcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS-NLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~ 145 (447)
...+.|+|..|+++...+..|+.+.+|+.||||+|+|+.+-|.+|..+.+|..|-+.+ |+++..--..|++|.+|+.|.
T Consensus 67 ~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 67 PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 3678999999999977777899999999999999999999999999999998887766 999955456799999999999
Q ss_pred CcCccccccCchHHhhcccccccccccccccccCC-CCCCCCccccccccccccccC
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP-DNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p-~~~~~~~~~~~~~~~n~~lc~ 201 (447)
+.-|++.-.....|..+++|..|.+-.|.+....- ....+...+....+.|++.|.
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~icd 203 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFICD 203 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCccccc
Confidence 99999998889999999999999999999874321 111223444555666776554
No 459
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.68 E-value=1.7e-09 Score=106.60 Aligned_cols=106 Identities=30% Similarity=0.537 Sum_probs=90.5
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
+..|-+++|+++ .+|++++.+..|..||.+.|.+. .+|+.++++.+|+.|++..|++. .+|+.+..|+ |..||+|.
T Consensus 145 Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~Lp-Li~lDfSc 220 (722)
T KOG0532|consen 145 LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSLP-LIRLDFSC 220 (722)
T ss_pred ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCCc-eeeeeccc
Confidence 566667777776 68888888888999999999888 68888999999999999999988 6888888665 88999999
Q ss_pred ccccccCchHHhhcccccccccccccccccC
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPV 179 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~ 179 (447)
|+++ .||-.|.+++.|++|-|.+|.+..+.
T Consensus 221 Nkis-~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 221 NKIS-YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred Ccee-ecchhhhhhhhheeeeeccCCCCCCh
Confidence 9997 68999999999999999999998654
No 460
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.67 E-value=2e-08 Score=106.16 Aligned_cols=113 Identities=25% Similarity=0.339 Sum_probs=50.1
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|++++ +|+.. .+|+.|++++|.|++ +|.. ..+|+.|+|++|+|+ .+|... ++|+.|+++
T Consensus 343 ~Lq~LdLS~N~Ls~-LP~lp---~~L~~L~Ls~N~L~~-LP~l---~~~L~~LdLs~N~Lt-~LP~l~---s~L~~LdLS 410 (788)
T PRK15387 343 GLQELSVSDNQLAS-LPTLP---SELYKLWAYNNRLTS-LPAL---PSGLKELIVSGNRLT-SLPVLP---SELKELMVS 410 (788)
T ss_pred ccceEecCCCccCC-CCCCC---cccceehhhcccccc-Cccc---ccccceEEecCCccc-CCCCcc---cCCCEEEcc
Confidence 45555666655553 33211 223333344443332 3321 134556666666665 244322 345555555
Q ss_pred CccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
+|++++ +|... .+|+.|++++|+++ .+|+ .+.+..+..+.+.+|+
T Consensus 411 ~N~Lss-IP~l~---~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~ 456 (788)
T PRK15387 411 GNRLTS-LPMLP---SGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNP 456 (788)
T ss_pred CCcCCC-CCcch---hhhhhhhhccCccc-ccChHHhhccCCCeEECCCCC
Confidence 555553 34321 23455555555555 2332 2223344444444443
No 461
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.65 E-value=3.1e-07 Score=97.65 Aligned_cols=96 Identities=28% Similarity=0.421 Sum_probs=56.6
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
.+.|+|+++.++ .+|..+. .+|+.|+|++|.++ .+|..+. .+|+.|++++|+|+ .+|..+. .+|+.|+|++
T Consensus 180 ~~~L~L~~~~Lt-sLP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~ 250 (754)
T PRK15370 180 KTELRLKILGLT-TIPACIP--EQITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSI 250 (754)
T ss_pred ceEEEeCCCCcC-cCCcccc--cCCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcC
Confidence 456777777776 3555443 36777777777777 4565443 46777777777766 4555442 3456666666
Q ss_pred ccccccCchHHhhccccccccccccccc
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
|++. .+|..+. .+|+.|++++|+++
T Consensus 251 N~L~-~LP~~l~--s~L~~L~Ls~N~L~ 275 (754)
T PRK15370 251 NRIT-ELPERLP--SALQSLDLFHNKIS 275 (754)
T ss_pred CccC-cCChhHh--CCCCEEECcCCccC
Confidence 6655 3454443 34555555555555
No 462
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.63 E-value=2e-07 Score=85.08 Aligned_cols=133 Identities=21% Similarity=0.199 Sum_probs=92.4
Q ss_pred CCCCccccCCCceEEEEEeCCCcEEEEEEccccccc---------------------ccHHHHHHHHHHHhcCCCC--Cc
Q 013258 298 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---------------------GGELQFQTEVKIISMAVHR--NL 354 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~~~~~~~~E~~~l~~l~H~--ni 354 (447)
.+.+.||-|.=+.||.|..+.|.++|||.=+...++ ......++|.+.|.++... .|
T Consensus 94 ~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~V 173 (304)
T COG0478 94 AIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKV 173 (304)
T ss_pred hhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCC
Confidence 445889999999999999988999999965432110 0122467899999988654 66
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 434 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 434 (447)
.+.+++ +...+||||+++-.|...- ++-.....+...|++-+.-.-.. +|||+|+.+=||++++
T Consensus 174 P~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~---GiVHGDlSefNIlV~~ 237 (304)
T COG0478 174 PKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRR---GIVHGDLSEFNILVTE 237 (304)
T ss_pred CCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHc---CccccCCchheEEEec
Confidence 666654 5568999999886554331 11122233333344433333344 8999999999999999
Q ss_pred CCceeecccccc
Q 013258 435 DADQSSKTILRR 446 (447)
Q Consensus 435 ~~~~~i~df~~~ 446 (447)
||++.+.||=+.
T Consensus 238 dg~~~vIDwPQ~ 249 (304)
T COG0478 238 DGDIVVIDWPQA 249 (304)
T ss_pred CCCEEEEeCccc
Confidence 999999998653
No 463
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=98.63 E-value=1.3e-08 Score=105.77 Aligned_cols=143 Identities=22% Similarity=0.296 Sum_probs=112.7
Q ss_pred CCCCCCccccCCCceEEEEEeC--CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~ 371 (447)
.|...+.||+|+|+.|-..... ....+|+|.+.... ..........|..+-..+. |+|++++++...+.+..++..
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 4556677999999999877643 24567777775432 1112223445777767776 999999999999999999999
Q ss_pred ecCCCCChhhHh-hccCCCCCCCChHHHHHHHHHHHHHHhhhh-cCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 372 PYMTNGSVASRL-RERQSSLPPLDWPTRKKIALGSARGLSYLH-EHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l-~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
||..+|++.+.+ .... ...+......+..|+..++.|+| .. ++.|||+||+|.+++..+ ..+++||.
T Consensus 101 ~~s~g~~~f~~i~~~~~---~~~~~~~~~~~~~ql~s~l~~~H~~~---~~~h~~ikP~n~~l~~s~~~l~~~df~ 170 (601)
T KOG0590|consen 101 SYSDGGSLFSKISHPDS---TGTSSSSASRYLPQLNSGLSYLHPEN---GVTHRDIKPSNSLLDESGSALKIADFG 170 (601)
T ss_pred CcccccccccccccCCc---cCCCCcchhhhhhhhccCccccCccc---ccccCCCCCccchhccCCCcccCCCch
Confidence 999999999988 3322 12556778889999999999999 76 999999999999999999 99999985
No 464
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=98.62 E-value=5.2e-08 Score=103.14 Aligned_cols=52 Identities=31% Similarity=0.347 Sum_probs=34.6
Q ss_pred CCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 139 KQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 139 ~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
.+|+.|+|++|++++ +|.. .++|+.|++++|++++ +|.. ...+..+.+.+|.
T Consensus 382 ~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l--~~~L~~L~Ls~Nq 433 (788)
T PRK15387 382 SGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML--PSGLLSLSVYRNQ 433 (788)
T ss_pred cccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc--hhhhhhhhhccCc
Confidence 367888888888875 5543 3578899999999986 5542 2334445555554
No 465
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.61 E-value=1.1e-07 Score=107.29 Aligned_cols=57 Identities=16% Similarity=0.229 Sum_probs=34.7
Q ss_pred CCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 140 QLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 140 ~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
+|+.|+|++|...+.+|..++++++|+.|++++|..-+.+|....+..+..+.+.++
T Consensus 779 sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~~L~sL~~L~Ls~c 835 (1153)
T PLN03210 779 SLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGINLESLESLDLSGC 835 (1153)
T ss_pred cchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCCCccccCEEECCCC
Confidence 455556666655556677777777777777777655555665544555555555443
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.60 E-value=3.3e-08 Score=98.81 Aligned_cols=146 Identities=18% Similarity=0.173 Sum_probs=113.2
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC--CCcEEEEEEcccccccccHH-HHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERTSGGEL-QFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~-~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
.-+.+|.....||.|.|+.|+....+ ++..|++|.+.........+ .-..|+-+...+ .|.++++....+...+..
T Consensus 262 ~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~ 341 (524)
T KOG0601|consen 262 CKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQG 341 (524)
T ss_pred eecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCccccccc
Confidence 34567888999999999999998743 57899999886544322222 234555555555 599999988888888888
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~ 444 (447)
++--||++++++...+... ..++...++++..|++.++.++|+. .++|+|+||+||++..+ +.-++.||.
T Consensus 342 ~ip~e~~~~~s~~l~~~~~----~~~d~~~~~~~~~q~~~~l~~i~s~---~~~~~d~~psni~i~~~~~~~~~~~~~ 412 (524)
T KOG0601|consen 342 YIPLEFCEGGSSSLRSVTS----QMLDEDPRLRLTAQILTALNVIHSK---LFVHLDVKPSNILISNDGFFSKLGDFG 412 (524)
T ss_pred cCchhhhcCcchhhhhHHH----HhcCcchhhhhHHHHHhccccccch---hhhcccccccceeeccchhhhhccccc
Confidence 9999999999887665322 2367788899999999999999988 99999999999999986 666666654
No 467
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=98.60 E-value=1.1e-07 Score=107.22 Aligned_cols=124 Identities=25% Similarity=0.342 Sum_probs=97.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|...+.+|..+++|++|+.|++++|..-+.+|..+ ++++|+.|++++|..-..+|.. .++|+.|+|
T Consensus 778 ~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~L 853 (1153)
T PLN03210 778 PSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNL 853 (1153)
T ss_pred ccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeEC
Confidence 368889999998888899999999999999999876555788776 7899999999987655566654 367889999
Q ss_pred cCccccccCchHHhhccccccccccc-ccccccCCCCCCCCccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSN-NRLSGPVPDNGSFSQFTPISFEN 195 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~-N~l~g~~p~~~~~~~~~~~~~~~ 195 (447)
++|.++ .+|..+..+++|+.|++++ |++.+..+....+..+..+.+.+
T Consensus 854 s~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~ 902 (1153)
T PLN03210 854 SRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSD 902 (1153)
T ss_pred CCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCC
Confidence 999997 5788999999999999988 56665444444455555555544
No 468
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.59 E-value=1.9e-07 Score=94.44 Aligned_cols=117 Identities=19% Similarity=0.187 Sum_probs=95.1
Q ss_pred eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCCh
Q 013258 316 LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDW 395 (447)
Q Consensus 316 ~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 395 (447)
..++.+|.|...+.... .......+.++.|+.++||||+++++.+...+..|+|+|-+. -|..++.+.. .
T Consensus 34 k~~~~~vsVF~~~~~~~-~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~-------~ 103 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNG-EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG-------K 103 (690)
T ss_pred eccCCceEEEEEeCCCc-hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH-------H
Confidence 45688899888865433 223346788889999999999999999999999999999885 3666665532 3
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 396 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 396 ~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
......+.||+.||.|||..| +++|++|.-.-|++++.|+-|++.|.
T Consensus 104 ~~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle 150 (690)
T KOG1243|consen 104 EEVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLE 150 (690)
T ss_pred HHHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeE
Confidence 455667889999999999765 89999999999999999999999875
No 469
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=98.58 E-value=8e-09 Score=107.12 Aligned_cols=104 Identities=38% Similarity=0.515 Sum_probs=90.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|+++.-....+.++..|+.|+||+|.|+ .+|..+.++..|++|...+|++. .+| .+..++.|+.+|+
T Consensus 383 ~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDl 459 (1081)
T KOG0618|consen 383 KHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDL 459 (1081)
T ss_pred cceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEec
Confidence 47899999999998555556889999999999999999 79999999999999999999998 678 8899999999999
Q ss_pred cCccccc-cCchHHhhccccccccccccc
Q 013258 147 NNNSLSG-LIPTSLTTITSLNILDLSNNR 174 (447)
Q Consensus 147 ~~N~l~~-~~p~~~~~l~~L~~l~ls~N~ 174 (447)
|.|+|+- .+|..... ++|++||+++|.
T Consensus 460 S~N~L~~~~l~~~~p~-p~LkyLdlSGN~ 487 (1081)
T KOG0618|consen 460 SCNNLSEVTLPEALPS-PNLKYLDLSGNT 487 (1081)
T ss_pred ccchhhhhhhhhhCCC-cccceeeccCCc
Confidence 9999974 34444433 789999999997
No 470
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=98.57 E-value=8.2e-08 Score=102.04 Aligned_cols=98 Identities=28% Similarity=0.433 Sum_probs=62.1
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.|+|++|.++ .+|..+. .+|+.|++++|+|+ .+|..+. .+|+.|+|++|++. .+|..+. .+|+.|+++
T Consensus 200 ~L~~L~Ls~N~Lt-sLP~~l~--~nL~~L~Ls~N~Lt-sLP~~l~--~~L~~L~Ls~N~L~-~LP~~l~--s~L~~L~Ls 270 (754)
T PRK15370 200 QITTLILDNNELK-SLPENLQ--GNIKTLYANSNQLT-SIPATLP--DTIQEMELSINRIT-ELPERLP--SALQSLDLF 270 (754)
T ss_pred CCcEEEecCCCCC-cCChhhc--cCCCEEECCCCccc-cCChhhh--ccccEEECcCCccC-cCChhHh--CCCCEEECc
Confidence 5788888888887 4666554 47888888888777 4565443 35666667666666 5565543 356666666
Q ss_pred CccccccCchHHhhcccccccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
+|+++. +|..+. ++|+.|++++|+|++
T Consensus 271 ~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~ 297 (754)
T PRK15370 271 HNKISC-LPENLP--EELRYLSVYDNSIRT 297 (754)
T ss_pred CCccCc-cccccC--CCCcEEECCCCcccc
Confidence 666653 454432 356666666666654
No 471
>PRK09902 hypothetical protein; Provisional
Probab=98.55 E-value=1.4e-06 Score=77.60 Aligned_cols=136 Identities=18% Similarity=0.179 Sum_probs=99.0
Q ss_pred ccCCCceEEEEEeCCCcEEEEEEccccc--c---cccHHHHHHHHHHHhcCCCCC--ccceeeEEe-cC----CceEEEe
Q 013258 304 GRGGFGKVYKGRLADGKLVAVKRLKEER--T---SGGELQFQTEVKIISMAVHRN--LLRLYGFCT-TV----TEKLLVY 371 (447)
Q Consensus 304 g~G~~g~Vy~~~~~~~~~vavK~~~~~~--~---~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~-~~----~~~~lv~ 371 (447)
|+||-+-|++-.+. |+.+-+|+-.... + +.+...|.+|...+..+...+ +.+.. ++. .. -..+||+
T Consensus 27 ~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 27 RRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVT 104 (216)
T ss_pred CCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEE
Confidence 56888889987764 4568888764111 1 335668999999999886433 44444 332 21 2357999
Q ss_pred ecCCC-CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc--eeecccccc
Q 013258 372 PYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTILRR 446 (447)
Q Consensus 372 e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~~i~df~~~ 446 (447)
|-+.+ -+|.+++.+... ...+...+..+..++++.+.-||.. ++.|+|+.+.||+++.++. +++.||++.
T Consensus 105 e~L~g~~~L~~~l~~~~~--~~~~~~~k~~il~~va~~ia~LH~~---Gv~Hgdly~khIll~~~g~~~v~lIDlEk~ 177 (216)
T PRK09902 105 EDMAGFISIADWYAQHAV--SPYSDEVRQAMLKAVALAFKKMHSV---NRQHGCCYVRHIYVKTEGKAEAGFLDLEKS 177 (216)
T ss_pred EeCCCCccHHHHHhcCCc--CCcchHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHhheeecCCCCeeEEEEEhhcc
Confidence 97753 588888865421 2345667789999999999999999 9999999999999986666 899999873
No 472
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=98.52 E-value=5.8e-08 Score=91.98 Aligned_cols=90 Identities=27% Similarity=0.345 Sum_probs=81.7
Q ss_pred ccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccc
Q 013258 87 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 166 (447)
Q Consensus 87 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 166 (447)
|..|++|+.|+|++|.+++.-+.+|..+..++.|.|..|++.-.--..|.++..|+.|+|.+|+++..-|.+|..+.+|.
T Consensus 270 f~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~ 349 (498)
T KOG4237|consen 270 FKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLS 349 (498)
T ss_pred HhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceee
Confidence 77899999999999999998999999999999999999999755556788999999999999999999999999999999
Q ss_pred cccccccccc
Q 013258 167 ILDLSNNRLS 176 (447)
Q Consensus 167 ~l~ls~N~l~ 176 (447)
.|++-.|.+.
T Consensus 350 ~l~l~~Np~~ 359 (498)
T KOG4237|consen 350 TLNLLSNPFN 359 (498)
T ss_pred eeehccCccc
Confidence 9999888874
No 473
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.51 E-value=3.9e-08 Score=95.11 Aligned_cols=111 Identities=30% Similarity=0.407 Sum_probs=76.8
Q ss_pred CCEEEEEcCCCCccccccccccCCCC---CCEEECCCCccCC----CCChhhcCC-CCCcEEEccCCccccc----CCcc
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKN---LELLELYGNNLSG----HIPSALGNL-IKLKSLDLYSNLFNGT----IPDT 134 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~---L~~L~L~~N~l~~----~~p~~~~~l-~~L~~L~ls~N~l~g~----~p~~ 134 (447)
..++.|+|++|.+.+..+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++. ++..
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~ 160 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKA 160 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHH
Confidence 46888888888887666666655555 8888888888773 334455666 7888888888887732 3345
Q ss_pred ccCCCCCCeeeCcCcccccc----CchHHhhcccccccccccccccc
Q 013258 135 LANLKQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 135 ~~~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
+..+++|+.|++++|.+++. ++..+...++|+.|++++|.+++
T Consensus 161 ~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~ 207 (319)
T cd00116 161 LRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTD 207 (319)
T ss_pred HHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccCh
Confidence 56667788888888888742 33445555678888888887763
No 474
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.50 E-value=6.5e-07 Score=80.98 Aligned_cols=102 Identities=19% Similarity=0.218 Sum_probs=79.8
Q ss_pred HHHHHHHHHHhcCCCCC--ccceeeEEecCC----ceEEEeecCCCC-ChhhHhhccCCCCCCCChHHHHHHHHHHHHHH
Q 013258 337 LQFQTEVKIISMAVHRN--LLRLYGFCTTVT----EKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGL 409 (447)
Q Consensus 337 ~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~----~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL 409 (447)
....+|...+..+.... +.+.+++..... ..++|+|++++- +|.+++..... .+......++.+++..+
T Consensus 56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~----~~~~~~~~ll~~l~~~i 131 (206)
T PF06293_consen 56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQ----LDPSQRRELLRALARLI 131 (206)
T ss_pred hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcc----cchhhHHHHHHHHHHHH
Confidence 35788888887775443 456666665532 358999999874 78988876322 45567788999999999
Q ss_pred hhhhcCCCCCeeecCCCCCceeeCCCC---ceeeccccc
Q 013258 410 SYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTILR 445 (447)
Q Consensus 410 ~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~~ 445 (447)
+-||.. +|+|+|+++.|||++.+. .+.+.||-+
T Consensus 132 ~~lH~~---gi~H~Dl~~~NILv~~~~~~~~~~lIDld~ 167 (206)
T PF06293_consen 132 AKLHDA---GIYHGDLNPSNILVDPDDGQYRFYLIDLDR 167 (206)
T ss_pred HHHHHC---cCCCCCCCcccEEEeCCCCceeEEEEcchh
Confidence 999999 999999999999999987 788888853
No 475
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=98.49 E-value=4.9e-08 Score=94.44 Aligned_cols=110 Identities=34% Similarity=0.422 Sum_probs=86.9
Q ss_pred CEEEEEcCCCCccc----cccccccCC-CCCCEEECCCCccCCC----CChhhcCCCCCcEEEccCCccccc----CCcc
Q 013258 68 SVTRVDLGNAALSG----ELAPELGQL-KNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IPDT 134 (447)
Q Consensus 68 ~v~~l~L~~~~l~g----~~~~~l~~l-~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~ 134 (447)
+++.|+|++|.+++ .+...+..+ .+|+.|+|++|.+++. ++..+..+++|+.|++++|.+++. ++..
T Consensus 109 ~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~ 188 (319)
T cd00116 109 SLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCEALAKALRANRDLKELNLANNGIGDAGIRALAEG 188 (319)
T ss_pred cccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHHHHHHHHHhCCCcCEEECcCCCCchHHHHHHHHH
Confidence 49999999999884 344556777 8999999999999843 445677788999999999999842 4455
Q ss_pred ccCCCCCCeeeCcCccccccC----chHHhhcccccccccccccccc
Q 013258 135 LANLKQLKYLRLNNNSLSGLI----PTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 135 ~~~l~~L~~L~l~~N~l~~~~----p~~~~~l~~L~~l~ls~N~l~g 177 (447)
+..+++|++|++++|.+++.. +..+..+++|+.|++++|.+++
T Consensus 189 l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 189 LKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 666789999999999987543 3445567789999999999875
No 476
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=98.48 E-value=2.1e-08 Score=99.01 Aligned_cols=125 Identities=30% Similarity=0.427 Sum_probs=87.8
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.+++|||+.|+++ .+|..++.|+ |+.|-+++|+++ .+|..++.+..|..||.+.|.+. .+|+.++.+.+|+.|++.
T Consensus 122 ~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vr 197 (722)
T KOG0532|consen 122 ALTFLDLSSNQLS-HLPDGLCDLP-LKVLIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVR 197 (722)
T ss_pred HHHHhhhccchhh-cCChhhhcCc-ceeEEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHh
Confidence 4677777777776 5666666654 677777788777 57777777777788888888776 677777788888888888
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLN 198 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 198 (447)
.|++. .+|..+..+ .|..||+|+|+++..+-+...+.++..+-+++|+.
T Consensus 198 Rn~l~-~lp~El~~L-pLi~lDfScNkis~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 198 RNHLE-DLPEELCSL-PLIRLDFSCNKISYLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred hhhhh-hCCHHHhCC-ceeeeecccCceeecchhhhhhhhheeeeeccCCC
Confidence 88776 456666655 37778888888775444444455555555666653
No 477
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.46 E-value=2.4e-08 Score=91.29 Aligned_cols=129 Identities=27% Similarity=0.315 Sum_probs=100.5
Q ss_pred CCCCCCCCCCCccceeEeCCC-----CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEE
Q 013258 46 QSWDNLPGNLCTWFHITCNPE-----GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSL 120 (447)
Q Consensus 46 ~~w~~~~~~~c~w~gv~c~~~-----~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 120 (447)
..|+.......+.+-++|-.. ..|..|+++.|.+... .++..|.+|+.||||+|.++ .+-.+-..|-+.+.|
T Consensus 281 dTWq~LtelDLS~N~I~~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 281 DTWQELTELDLSGNLITQIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred chHhhhhhccccccchhhhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 356655445556677777532 4689999999999742 23888999999999999998 455555678899999
Q ss_pred EccCCcccccCCccccCCCCCCeeeCcCcccccc-CchHHhhcccccccccccccccccC
Q 013258 121 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGL-IPTSLTTITSLNILDLSNNRLSGPV 179 (447)
Q Consensus 121 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~-~p~~~~~l~~L~~l~ls~N~l~g~~ 179 (447)
.|+.|.+.. -+.++.+=+|..||+++|++... --..+++++.|+.+.+-+|.+.+.+
T Consensus 358 ~La~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~v 415 (490)
T KOG1259|consen 358 KLAQNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSV 415 (490)
T ss_pred ehhhhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccc
Confidence 999999862 34577788999999999999632 1246789999999999999998754
No 478
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.39 E-value=1e-06 Score=89.50 Aligned_cols=134 Identities=19% Similarity=0.219 Sum_probs=88.0
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEccccccc---------------------c------------------cHHHHHH
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---------------------G------------------GELQFQT 341 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---------------------~------------------~~~~~~~ 341 (447)
+.|+.++-|+||+|++++|+.||||+.++.-.. . .+.++.+
T Consensus 131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~ 210 (517)
T COG0661 131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR 210 (517)
T ss_pred CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence 789999999999999999999999998753211 0 0112445
Q ss_pred HHHHHhcCC-----CCCccceeeEEe-cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHH-Hhhhhc
Q 013258 342 EVKIISMAV-----HRNLLRLYGFCT-TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARG-LSYLHE 414 (447)
Q Consensus 342 E~~~l~~l~-----H~niv~l~~~~~-~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~g-L~yLH~ 414 (447)
|...+.+++ .+++ ++-.+|. -.....|+|||++|-.+.+....... ..+ +..++..++++ +.-+-.
T Consensus 211 EA~n~~~~~~nf~~~~~v-~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~---g~d---~k~ia~~~~~~f~~q~~~ 283 (517)
T COG0661 211 EAANAERFRENFKDDPDV-YVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSA---GID---RKELAELLVRAFLRQLLR 283 (517)
T ss_pred HHHHHHHHHHHcCCCCCe-EeceeehhccCCcEEEEEeeCCEecccHHHHHhc---CCC---HHHHHHHHHHHHHHHHHh
Confidence 666655442 3333 3333333 35678999999999888877432211 134 23333333332 222222
Q ss_pred CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 415 HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 415 ~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
. +++|.|..|.||+++.++..-..||-
T Consensus 284 d---gffHaDpHpGNi~v~~~g~i~~lDfG 310 (517)
T COG0661 284 D---GFFHADPHPGNILVRSDGRIVLLDFG 310 (517)
T ss_pred c---CccccCCCccceEEecCCcEEEEcCc
Confidence 3 89999999999999999998888874
No 479
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.38 E-value=2.3e-07 Score=86.16 Aligned_cols=95 Identities=25% Similarity=0.383 Sum_probs=80.8
Q ss_pred HhcCCCCCccceeeEEecC-----CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCe
Q 013258 346 ISMAVHRNLLRLYGFCTTV-----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKI 420 (447)
Q Consensus 346 l~~l~H~niv~l~~~~~~~-----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~i 420 (447)
+-.+.|.|||+++.|+.+. ....++.|||..|++.++|++.+.....+....-.+++-||..||.|||+. .|+|
T Consensus 121 llqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~Ppi 199 (458)
T KOG1266|consen 121 LLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DPPI 199 (458)
T ss_pred HHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CCcc
Confidence 3455699999999988653 346899999999999999998655555677777789999999999999995 8999
Q ss_pred eecCCCCCceeeCCCCceeec
Q 013258 421 IHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 421 vHrDlkp~NILl~~~~~~~i~ 441 (447)
+|+++.-+-|.+..++-+|+.
T Consensus 200 ihgnlTc~tifiq~ngLIkig 220 (458)
T KOG1266|consen 200 IHGNLTCDTIFIQHNGLIKIG 220 (458)
T ss_pred ccCCcchhheeecCCceEEec
Confidence 999999999999999988875
No 480
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.33 E-value=6.5e-06 Score=75.48 Aligned_cols=73 Identities=12% Similarity=0.105 Sum_probs=53.1
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecCCceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
...||+|..+.||+. .+..+++|..+... ......+|.+++..+..-. +.+.+++....+...+|||+++|.
T Consensus 6 ~~~i~~G~t~~~y~~---~~~~~VlR~~~~~~---~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~ 79 (226)
T TIGR02172 6 WTQTGEGGNGESYTH---KTGKWMLKLYNPGF---DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGK 79 (226)
T ss_pred heeecCCCCcceeEe---cCCCEEEEeCCCCC---CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCc
Confidence 367999999999984 24457788875432 2335788999998886443 466777777777778999999886
Q ss_pred C
Q 013258 378 S 378 (447)
Q Consensus 378 s 378 (447)
.
T Consensus 80 ~ 80 (226)
T TIGR02172 80 R 80 (226)
T ss_pred c
Confidence 3
No 481
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.33 E-value=3.6e-07 Score=91.31 Aligned_cols=104 Identities=39% Similarity=0.633 Sum_probs=68.9
Q ss_pred CEEEEEcCCCCccccccccccCCC-CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 68 SVTRVDLGNAALSGELAPELGQLK-NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.++.|++.+|.++ .+++....+. +|+.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.++.|+.|++
T Consensus 117 ~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~l 193 (394)
T COG4886 117 NLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDL 193 (394)
T ss_pred ceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheec
Confidence 4666777777666 4555556664 7777777777776 45556677777777777777776 56665556677777777
Q ss_pred cCccccccCchHHhhcccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRL 175 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l 175 (447)
++|+++ .+|.....+..|+.+.+++|.+
T Consensus 194 s~N~i~-~l~~~~~~~~~L~~l~~~~N~~ 221 (394)
T COG4886 194 SGNKIS-DLPPEIELLSALEELDLSNNSI 221 (394)
T ss_pred cCCccc-cCchhhhhhhhhhhhhhcCCcc
Confidence 777776 4555555555577777777743
No 482
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.26 E-value=1.7e-07 Score=76.34 Aligned_cols=104 Identities=24% Similarity=0.367 Sum_probs=67.3
Q ss_pred EEEEEcCCCCcccccc---ccccCCCCCCEEECCCCccCCCCChhhc-CCCCCcEEEccCCcccccCCccccCCCCCCee
Q 013258 69 VTRVDLGNAALSGELA---PELGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYL 144 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~---~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 144 (447)
.-.+||+++.+. .++ ..+.....|+..+|++|.|.. .|+.|. .++.++.|+|++|.++ .+|..+..++.|+.|
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~l 105 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSL 105 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhc
Confidence 345566666553 233 234445566666777777773 455554 3457777777777777 677777777777777
Q ss_pred eCcCccccccCchHHhhccccccccccccccc
Q 013258 145 RLNNNSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 145 ~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
+++.|.+.. .|..+..+.+|..||..+|.+.
T Consensus 106 Nl~~N~l~~-~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 106 NLRFNPLNA-EPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred ccccCcccc-chHHHHHHHhHHHhcCCCCccc
Confidence 777777763 4666666777777777666654
No 483
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.23 E-value=6.7e-08 Score=78.61 Aligned_cols=111 Identities=23% Similarity=0.331 Sum_probs=87.8
Q ss_pred CCEEEEEcCCCCcccccccccc-CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
-.++.++|++|.+.. +|+.+. ..+.++.|+|++|.++ .+|.++..++.|+.|+++.|.|. ..|..+..|.+|.+||
T Consensus 53 ~el~~i~ls~N~fk~-fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Ld 129 (177)
T KOG4579|consen 53 YELTKISLSDNGFKK-FPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLD 129 (177)
T ss_pred ceEEEEecccchhhh-CCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhc
Confidence 468899999999984 555554 4568999999999999 69999999999999999999998 6788888899999999
Q ss_pred CcCccccccCchHHhhcccccccccccccccccCCC
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
..+|.+. .+|-.+...+..-..++.++.+.+..|.
T Consensus 130 s~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 130 SPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred CCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 9999886 5666654444445556666666665554
No 484
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.23 E-value=6.3e-06 Score=81.35 Aligned_cols=129 Identities=16% Similarity=0.121 Sum_probs=96.1
Q ss_pred ceEEEEE-eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec----CCceEEEeecCCC-CChhhH
Q 013258 309 GKVYKGR-LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLVYPYMTN-GSVASR 382 (447)
Q Consensus 309 g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~e~~~~-gsL~~~ 382 (447)
.+.||+. ..||..|..|++........ .....-++.++++.|+|+|++.+++.. +..+++||+|.++ ++|.++
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~-nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQST-NKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCc-ccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 5679997 45799999999954332111 123345678899999999999998873 4467899999986 567666
Q ss_pred hhccCC-----------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 383 LRERQS-----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 383 l~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
...... .....++...+.++.|++.||.++|+. |..-+-|.+.+||++.+..++|+
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS 435 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRIS 435 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEe
Confidence 543211 112356678889999999999999998 88889999999999998766654
No 485
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.22 E-value=1e-06 Score=93.26 Aligned_cols=106 Identities=24% Similarity=0.363 Sum_probs=73.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|..++.|..|+||.||..+++. .+.+|+|+-+.. .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~-------lilRn--ilt~a~npfvv------------------ 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN-------LILRN--ILTFAGNPFVV------------------ 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccc-------hhhhc--cccccCCccee------------------
Confidence 578888999999999999998764 677888532221 11111 23333334333
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
||-...+...+. ++- +.+.+++|+|+. +|+|||+||+|.+|+.-|.+|+.||-.
T Consensus 136 ---gDc~tllk~~g~----lPv--------dmvla~Eylh~y---givhrdlkpdnllIT~mGhiKlTDfgL 189 (1205)
T KOG0606|consen 136 ---GDCATLLKNIGP----LPV--------DMVLAVEYLHSY---GIVHRDLKPDNLLITSMGHIKLTDFGL 189 (1205)
T ss_pred ---chhhhhcccCCC----Ccc--------hhhHHhHhhccC---CeecCCCCCCcceeeecccccccchhh
Confidence 565555554322 221 126889999999 999999999999999999999999964
No 486
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.18 E-value=2.4e-06 Score=85.67 Aligned_cols=142 Identities=21% Similarity=0.103 Sum_probs=107.6
Q ss_pred CCCCCCcccc--CCCceEEEEEe--C-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceE
Q 013258 296 GFSNKNILGR--GGFGKVYKGRL--A-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 296 ~~~~~~~lg~--G~~g~Vy~~~~--~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~ 368 (447)
.|.....+|. |.+|.||.+.. + ++..+|+|.-+.... ......-.+|......++ |+|.++.+..+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 3555678999 99999999986 3 578899997432211 122223345666666664 999999889999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHH----HHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeeccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR----GLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTI 443 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~----gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df 443 (447)
+-+|++. .+|.++.+.... .++......+..+..+ ||.++|+. +|+|-|+||.||....+ ...+..||
T Consensus 195 iqtE~~~-~sl~~~~~~~~~---~~p~~~l~~~~~~~~~~~~~al~~~hs~---~~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELCG-ESLQSYCHTPCN---FLPDNLLWNSLRDWLSRDVTALSHLHSN---NIVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeecccc-chhHHhhhcccc---cCCchhhhhHHhhhhhcccccccccCCC---cccccccchhheecccccceeecCCc
Confidence 9999885 688877765432 2555666777777777 99999999 99999999999999999 77777777
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 268 ~ 268 (524)
T KOG0601|consen 268 G 268 (524)
T ss_pred c
Confidence 3
No 487
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.17 E-value=6.9e-06 Score=83.32 Aligned_cols=134 Identities=17% Similarity=0.155 Sum_probs=82.2
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccc------------------------------------cHHHHHHHH
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG------------------------------------GELQFQTEV 343 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------------------------~~~~~~~E~ 343 (447)
.+.||.-+.|+||+|++++|+.||||+-++.-... .+.+|..|+
T Consensus 166 ~~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA 245 (538)
T KOG1235|consen 166 EEPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEA 245 (538)
T ss_pred cchhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHH
Confidence 37899999999999999999999999876532110 111355566
Q ss_pred HHHhcC----CCCC------ccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh
Q 013258 344 KIISMA----VHRN------LLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH 413 (447)
Q Consensus 344 ~~l~~l----~H~n------iv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH 413 (447)
+...++ +|-+ |.+++.. -.....|+||||+|..+.+.-.-...+ ++-.....-+.++..-+-+ +
T Consensus 246 ~Nae~~~~~f~~~~~~~~V~VP~Vy~~--~st~RVLtME~~~G~~i~Dl~~i~~~g---i~~~~i~~~l~~~~~~qIf-~ 319 (538)
T KOG1235|consen 246 KNAERFRENFKDFSLLTYVLVPKVYWD--LSTKRVLTMEYVDGIKINDLDAIDKRG---ISPHDILNKLVEAYLEQIF-K 319 (538)
T ss_pred HhHHHHHHHHHhcccccceeCCeehhh--cCcceEEEEEecCCccCCCHHHHHHcC---CCHHHHHHHHHHHHHHHHH-h
Confidence 554433 3555 3333322 234689999999998776653322221 3333333222222111112 2
Q ss_pred cCCCCCeeecCCCCCceeeCC----CCceeeccc
Q 013258 414 EHCDPKIIHRDVKAANILLDE----DADQSSKTI 443 (447)
Q Consensus 414 ~~~~~~ivHrDlkp~NILl~~----~~~~~i~df 443 (447)
. |++|+|-.|.||+++. ++++.+.||
T Consensus 320 -~---GffHaDPHPGNilv~~~~~~~~~ivllDh 349 (538)
T KOG1235|consen 320 -T---GFFHADPHPGNILVRPNPEGDEEIVLLDH 349 (538)
T ss_pred -c---CCccCCCCCCcEEEecCCCCCccEEEEcc
Confidence 2 7999999999999995 456666665
No 488
>PLN02876 acyl-CoA dehydrogenase
Probab=98.16 E-value=2.2e-05 Score=85.77 Aligned_cols=79 Identities=13% Similarity=0.296 Sum_probs=56.9
Q ss_pred CCccccCCCceEEEEEeCCC---cEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCc--cceeeEEecC---CceEEE
Q 013258 300 KNILGRGGFGKVYKGRLADG---KLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNL--LRLYGFCTTV---TEKLLV 370 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~ni--v~l~~~~~~~---~~~~lv 370 (447)
.+.++.|.+..+|+....++ ..+++|+............+.+|.++++.+. |.++ .+++.+|.+. +..|+|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 36688899999999876553 3677777644332223346889999999985 6665 7777877654 357899
Q ss_pred eecCCCCC
Q 013258 371 YPYMTNGS 378 (447)
Q Consensus 371 ~e~~~~gs 378 (447)
|||+++..
T Consensus 123 ME~v~G~~ 130 (822)
T PLN02876 123 MEYLEGRI 130 (822)
T ss_pred EEecCCcc
Confidence 99998754
No 489
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.16 E-value=9.8e-08 Score=96.79 Aligned_cols=121 Identities=32% Similarity=0.377 Sum_probs=58.0
Q ss_pred cCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCcc-ccCCCCCCeeeCcCcccc
Q 013258 74 LGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLKYLRLNNNSLS 152 (447)
Q Consensus 74 L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~l~~N~l~ 152 (447)
.+.|.+. .+..++.-++.|++|||+.|+++.. ..+..|+.|+.|||+.|+|. .+|.. ...+ .|+.|++++|.++
T Consensus 171 fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc-~L~~L~lrnN~l~ 245 (1096)
T KOG1859|consen 171 FSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLR-HVPQLSMVGC-KLQLLNLRNNALT 245 (1096)
T ss_pred cchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhc-cccccchhhh-hheeeeecccHHH
Confidence 3344443 2334445555556666666665522 14555556666666666655 34432 1122 2556666666554
Q ss_pred ccCchHHhhccccccccccccccccc--CCCCCCCCccccccccccccccC
Q 013258 153 GLIPTSLTTITSLNILDLSNNRLSGP--VPDNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 153 ~~~p~~~~~l~~L~~l~ls~N~l~g~--~p~~~~~~~~~~~~~~~n~~lc~ 201 (447)
.. ..+.++.+|+.||+|+|-+.+- +--.+.+..+..+.++||+.-|.
T Consensus 246 tL--~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~ 294 (1096)
T KOG1859|consen 246 TL--RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCA 294 (1096)
T ss_pred hh--hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccC
Confidence 32 2345555566666666655431 10011233344444555555444
No 490
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=98.13 E-value=1.1e-06 Score=87.83 Aligned_cols=126 Identities=33% Similarity=0.494 Sum_probs=97.0
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|++++|.+. .+|..+..+++|+.|++++|+++ .+|...+.++.|+.|++++|++. .+|..+..+..|++|+++
T Consensus 141 nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~ 217 (394)
T COG4886 141 NLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLS 217 (394)
T ss_pred hcccccccccchh-hhhhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhc
Confidence 6899999999997 55567899999999999999999 57877778999999999999998 788876667779999999
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
+|.+. .++..+.++.++..+.+++|++...+-..+.+..+..+++.+|.
T Consensus 218 ~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~~~~~~~~l~~l~~L~~s~n~ 266 (394)
T COG4886 218 NNSII-ELLSSLSNLKNLSGLELSNNKLEDLPESIGNLSNLETLDLSNNQ 266 (394)
T ss_pred CCcce-ecchhhhhcccccccccCCceeeeccchhccccccceecccccc
Confidence 99543 35667788888888888888876532222233344555555543
No 491
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.08 E-value=1.3e-05 Score=71.11 Aligned_cols=99 Identities=22% Similarity=0.264 Sum_probs=77.4
Q ss_pred HHHHHHHhcCCC-CCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCC
Q 013258 340 QTEVKIISMAVH-RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDP 418 (447)
Q Consensus 340 ~~E~~~l~~l~H-~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~ 418 (447)
..|.-++..+.+ +++++++|+|- .+++.||...+++...-.. ......-+|..|.+||.++++.++++++...-
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~-l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP-LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc-cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357778888876 69999999984 4789999988776532100 00111268999999999999999999985433
Q ss_pred CeeecCCCCCceeeCCCCceeeccc
Q 013258 419 KIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 419 ~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
.+.-.|++++|+-+++++.+|+.|.
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDl 106 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDL 106 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEec
Confidence 6889999999999999999999985
No 492
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=98.05 E-value=6.9e-06 Score=72.01 Aligned_cols=52 Identities=33% Similarity=0.301 Sum_probs=45.3
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceee
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
|+|.++++..+. .++|..+..++.|+++||+|||++ + ||+|||+++++.+++
T Consensus 1 GsL~~~l~~~~~---~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~ 52 (176)
T smart00750 1 VSLADILEVRGR---PLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL 52 (176)
T ss_pred CcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee
Confidence 789999976432 489999999999999999999998 4 999999999987765
No 493
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.03 E-value=4.5e-06 Score=54.93 Aligned_cols=36 Identities=39% Similarity=0.625 Sum_probs=17.6
Q ss_pred CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccc
Q 013258 92 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN 128 (447)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 128 (447)
+|++|++++|+++ .+|+.+++|++|+.|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4555555555555 34444555555555555555544
No 494
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.99 E-value=5.3e-06 Score=54.60 Aligned_cols=38 Identities=39% Similarity=0.594 Sum_probs=27.0
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccc
Q 013258 115 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSG 153 (447)
Q Consensus 115 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~ 153 (447)
++|++|++++|+++ .+|+.+++|++|+.|++++|+++.
T Consensus 1 ~~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~~ 38 (44)
T PF12799_consen 1 KNLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPISD 38 (44)
T ss_dssp TT-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCSB
T ss_pred CcceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCCC
Confidence 46777888888887 567667778888888888887763
No 495
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=97.93 E-value=4.5e-05 Score=69.94 Aligned_cols=77 Identities=16% Similarity=0.213 Sum_probs=54.3
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC--CccceeeEEec---CCceEEEeecCC
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR--NLLRLYGFCTT---VTEKLLVYPYMT 375 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~~~~---~~~~~lv~e~~~ 375 (447)
+.++.|..+.||+....+ +.+++|..... .....+.+|..++..+... .+.+++.+... ....+++|+|++
T Consensus 3 ~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~---~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 3 RPLSGGFSNRVYRVTTDD-GRYVLKFYRPP---DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEESSSSEEEEEEETT-SEEEEEEESSH---HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred ccCCCCCeeeEEEEEECC-cEEEEEEeCCC---CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 568899999999999876 68999987543 2334677888888877533 35566664432 234689999999
Q ss_pred CCChhh
Q 013258 376 NGSVAS 381 (447)
Q Consensus 376 ~gsL~~ 381 (447)
+..+..
T Consensus 79 g~~~~~ 84 (239)
T PF01636_consen 79 GRPLDD 84 (239)
T ss_dssp SEEHHH
T ss_pred cccccc
Confidence 887766
No 496
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.92 E-value=0.00012 Score=66.42 Aligned_cols=151 Identities=19% Similarity=0.262 Sum_probs=93.8
Q ss_pred ccHHHHHHHhcCCCCCCccc---cCCCceEEEEEeCCCcEEEEEEcccccccc------------------cHH-----H
Q 013258 285 FSLRELQVATDGFSNKNILG---RGGFGKVYKGRLADGKLVAVKRLKEERTSG------------------GEL-----Q 338 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg---~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~------------------~~~-----~ 338 (447)
.+.+.+....++..+.+..| +|.-+.||+|.-.++..+|||+.+.....- ... -
T Consensus 35 ~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W 114 (268)
T COG1718 35 RTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAW 114 (268)
T ss_pred HHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHH
Confidence 44555555555555555555 555566999997789999999986432110 000 1
Q ss_pred HHHHHHHHhcCC--CCCccceeeEEecCCceEEEeecCCCC-ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC
Q 013258 339 FQTEVKIISMAV--HRNLLRLYGFCTTVTEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH 415 (447)
Q Consensus 339 ~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~ 415 (447)
...|...|.++. +-.+.+-+++ ..-.|||||+... .-.-.|.+- .+.......+..++++.+.-|-..
T Consensus 115 ~~kEf~NL~R~~eAGVrvP~Pi~~----~~nVLvMEfIg~~g~pAP~LkDv-----~~e~~e~~~~~~~~v~~~~~l~~~ 185 (268)
T COG1718 115 ARKEFRNLKRAYEAGVRVPEPIAF----RNNVLVMEFIGDDGLPAPRLKDV-----PLELEEAEGLYEDVVEYMRRLYKE 185 (268)
T ss_pred HHHHHHHHHHHHHcCCCCCCceee----cCCeEEEEeccCCCCCCCCcccC-----CcCchhHHHHHHHHHHHHHHHHHh
Confidence 234565565553 2333334433 2347999999543 222222221 122225667777788888777762
Q ss_pred CCCCeeecCCCCCceeeCCCCceeeccccccC
Q 013258 416 CDPKIIHRDVKAANILLDEDADQSSKTILRRL 447 (447)
Q Consensus 416 ~~~~ivHrDlkp~NILl~~~~~~~i~df~~~~ 447 (447)
+ ++||+||..=|||+. ++.+.|.|+-+.+
T Consensus 186 a--~LVHgDLSEyNiL~~-~~~p~iID~~QaV 214 (268)
T COG1718 186 A--GLVHGDLSEYNILVH-DGEPYIIDVSQAV 214 (268)
T ss_pred c--CcccccchhhheEEE-CCeEEEEECcccc
Confidence 2 899999999999999 8899999987653
No 497
>PRK10593 hypothetical protein; Provisional
Probab=97.91 E-value=0.00016 Score=69.26 Aligned_cols=76 Identities=14% Similarity=0.102 Sum_probs=55.0
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCC---CCccceeeEEec---CCceEEEeec
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH---RNLLRLYGFCTT---VTEKLLVYPY 373 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H---~niv~l~~~~~~---~~~~~lv~e~ 373 (447)
.+.||.|..+.||+....+++ +.+|..+.. .....+..|.+.++.+.- -.+.+++++|.. .+..++|||+
T Consensus 19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~---~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~ 94 (297)
T PRK10593 19 VECISEQPYAALWALYDSQGN-PMPLMARSF---STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLER 94 (297)
T ss_pred eeecCCccceeEEEEEcCCCC-EEEEEeccc---ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEec
Confidence 467999999999998765554 666764331 122368899999988753 357788887754 3568999999
Q ss_pred CCCCCh
Q 013258 374 MTNGSV 379 (447)
Q Consensus 374 ~~~gsL 379 (447)
++++++
T Consensus 95 i~G~~~ 100 (297)
T PRK10593 95 LRGVSV 100 (297)
T ss_pred cCCEec
Confidence 998754
No 498
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=97.91 E-value=0.00012 Score=67.87 Aligned_cols=76 Identities=9% Similarity=0.047 Sum_probs=52.0
Q ss_pred ccccCCC-ceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeecCCCCCh
Q 013258 302 ILGRGGF-GKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNGSV 379 (447)
Q Consensus 302 ~lg~G~~-g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~gsL 379 (447)
.|..|.. ..||+.... +..+.||+..... ..+..+|++++..+. +--+.+++++....+..++||||++|.++
T Consensus 5 ~~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~----~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l 79 (244)
T cd05150 5 RVTEGQSGATVYRLDGK-NPGLYLKIAPSGP----TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPA 79 (244)
T ss_pred ecCCCCCcCeEEEEcCC-CCcEEEEecCCCc----ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccH
Confidence 3455555 779998764 4678888775432 234678888887774 33455777777666678999999998776
Q ss_pred hhH
Q 013258 380 ASR 382 (447)
Q Consensus 380 ~~~ 382 (447)
.+.
T Consensus 80 ~~~ 82 (244)
T cd05150 80 AAL 82 (244)
T ss_pred hHh
Confidence 543
No 499
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.87 E-value=0.00021 Score=63.80 Aligned_cols=130 Identities=21% Similarity=0.314 Sum_probs=88.9
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEccccc---------------ccccHHHHHHHHHHHhcCC------CCCcccee
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEER---------------TSGGELQFQTEVKIISMAV------HRNLLRLY 358 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~---------------~~~~~~~~~~E~~~l~~l~------H~niv~l~ 358 (447)
...||+|+.-.||. +++.....||+.+... ......+..+|+.....+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46799999988885 4455566788886544 1112345677777665555 88999999
Q ss_pred eEEecCCceEEEeecCCC--C----ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 359 GFCTTVTEKLLVYPYMTN--G----SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 359 ~~~~~~~~~~lv~e~~~~--g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
|+..+.....+|+|.+.+ | +|.+++.+.. ++. .+...+-+-..||-.. +|+.+|++|+||++
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~-----~~~----~~~~~L~~f~~~l~~~---~Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLKEGG-----LTE----ELRQALDEFKRYLLDH---HIVIRDLNPHNIVV 151 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHHcCC-----ccH----HHHHHHHHHHHHHHHc---CCeecCCCcccEEE
Confidence 999999999999998743 2 4667764432 333 2333333445677777 89999999999999
Q ss_pred CCCC----ceeeccc
Q 013258 433 DEDA----DQSSKTI 443 (447)
Q Consensus 433 ~~~~----~~~i~df 443 (447)
.... ...+.|-
T Consensus 152 ~~~~~~~~~lvlIDG 166 (199)
T PF10707_consen 152 QRRDSGEFRLVLIDG 166 (199)
T ss_pred EecCCCceEEEEEeC
Confidence 7544 3445553
No 500
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.86 E-value=6.5e-05 Score=67.39 Aligned_cols=134 Identities=15% Similarity=0.174 Sum_probs=83.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHH---------HHHHHHHHhcCCCCCc---cceeeE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQ---------FQTEVKIISMAVHRNL---LRLYGF 360 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~---------~~~E~~~l~~l~H~ni---v~l~~~ 360 (447)
...+|...+++-......|.+-.. +|+.+.+|..+..... ..+. ..+++..+..++...+ ..++-+
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r-~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~ 106 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRR-PERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLA 106 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhh-HHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceee
Confidence 345677777776666666665555 5788899987654321 1111 2334444444432222 222222
Q ss_pred Ee-----cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC
Q 013258 361 CT-----TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED 435 (447)
Q Consensus 361 ~~-----~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~ 435 (447)
.. -....+++|||++|..|.+... ++. .++..+.+++.-+|.. |++|+|..|.|++++++
T Consensus 107 ~ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~---G~~HGD~hpgNFlv~~~ 171 (229)
T PF06176_consen 107 AEKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKH---GFYHGDPHPGNFLVSNN 171 (229)
T ss_pred eeeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHc---CCccCCCCcCcEEEECC
Confidence 22 1234578999999988765532 221 2455677788999999 99999999999999965
Q ss_pred Cceeecccc
Q 013258 436 ADQSSKTIL 444 (447)
Q Consensus 436 ~~~~i~df~ 444 (447)
+ .++.||-
T Consensus 172 ~-i~iID~~ 179 (229)
T PF06176_consen 172 G-IRIIDTQ 179 (229)
T ss_pred c-EEEEECc
Confidence 5 7888873
Done!