Query 013258
Match_columns 447
No_of_seqs 531 out of 3804
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 07:11:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013258.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013258hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 100.0 3.7E-34 1.3E-38 273.7 12.9 146 296-444 27-190 (308)
2 4asz_A BDNF/NT-3 growth factor 100.0 3.7E-34 1.3E-38 272.5 12.0 146 295-444 13-173 (299)
3 4aoj_A High affinity nerve gro 100.0 1.3E-33 4.4E-38 272.4 12.4 146 295-444 41-203 (329)
4 4b9d_A Serine/threonine-protei 100.0 2.3E-33 7.7E-38 271.2 13.6 145 295-444 24-170 (350)
5 3omv_A RAF proto-oncogene seri 100.0 3.7E-33 1.3E-37 265.8 13.4 142 294-444 35-177 (307)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 2.3E-33 8E-38 266.8 11.1 143 295-444 32-177 (311)
7 4fih_A Serine/threonine-protei 100.0 8.9E-33 3.1E-37 266.7 12.8 141 295-444 74-215 (346)
8 3hmm_A TGF-beta receptor type- 100.0 2.6E-32 8.7E-37 261.1 12.3 141 296-444 4-153 (303)
9 3hyh_A Carbon catabolite-derep 100.0 4.1E-32 1.4E-36 254.6 13.4 142 295-444 13-157 (275)
10 4fie_A Serine/threonine-protei 100.0 4.9E-32 1.7E-36 267.9 13.9 141 295-444 151-292 (423)
11 4g31_A Eukaryotic translation 100.0 3.1E-32 1E-36 259.6 11.5 146 295-444 5-163 (299)
12 3fpq_A Serine/threonine-protei 100.0 6.8E-32 2.3E-36 255.3 12.4 142 298-444 29-177 (290)
13 4g3f_A NF-kappa-beta-inducing 100.0 4.3E-32 1.5E-36 261.1 11.2 137 295-444 58-196 (336)
14 3ubd_A Ribosomal protein S6 ki 100.0 1.2E-32 4.2E-37 261.7 7.2 143 295-444 24-171 (304)
15 4ase_A Vascular endothelial gr 100.0 4.6E-32 1.6E-36 263.7 8.6 157 285-444 54-230 (353)
16 3uim_A Brassinosteroid insensi 100.0 9E-30 3.1E-34 246.1 14.7 175 270-444 5-179 (326)
17 4b99_A Mitogen-activated prote 100.0 1.1E-29 3.8E-34 251.1 12.2 142 295-444 54-203 (398)
18 3v5w_A G-protein coupled recep 100.0 5.4E-29 1.9E-33 257.3 12.9 144 294-444 188-337 (689)
19 4f9c_A Cell division cycle 7-r 100.0 6.8E-29 2.3E-33 242.7 12.2 139 293-444 19-163 (361)
20 3uto_A Twitchin; kinase, muscl 99.9 5.8E-28 2E-32 250.0 12.4 143 295-444 157-302 (573)
21 2qkw_B Protein kinase; three-h 99.9 1.7E-27 6E-32 229.6 13.0 152 289-444 33-184 (321)
22 3zgw_A Maternal embryonic leuc 99.9 5E-27 1.7E-31 228.8 12.5 144 294-444 9-153 (347)
23 4aw2_A Serine/threonine-protei 99.9 2.7E-27 9.4E-32 237.4 10.5 153 286-444 65-220 (437)
24 2qol_A Ephrin receptor; recept 99.9 6.6E-27 2.3E-31 230.5 13.0 145 294-444 44-192 (373)
25 2psq_A Fibroblast growth facto 99.9 9.2E-27 3.1E-31 229.2 13.6 148 294-444 80-248 (370)
26 3fe3_A MAP/microtubule affinit 99.9 9.5E-27 3.3E-31 225.3 13.2 144 294-444 14-159 (328)
27 3kul_A Ephrin type-A receptor 99.9 9.4E-27 3.2E-31 225.1 12.6 144 295-444 49-196 (325)
28 3qd2_B Eukaryotic translation 99.9 1.4E-26 4.7E-31 223.8 13.7 147 294-444 5-209 (332)
29 3v8s_A RHO-associated protein 99.9 5.4E-27 1.9E-31 233.4 9.8 150 287-444 61-213 (410)
30 1o6l_A RAC-beta serine/threoni 99.9 1.6E-26 5.5E-31 224.4 12.7 143 295-444 5-150 (337)
31 2vd5_A DMPK protein; serine/th 99.9 6.5E-27 2.2E-31 233.0 10.1 154 285-444 51-207 (412)
32 3fxz_A Serine/threonine-protei 99.9 4.1E-26 1.4E-30 217.7 15.2 142 294-444 19-161 (297)
33 3cbl_A C-FES, proto-oncogene t 99.9 6.1E-27 2.1E-31 231.1 9.8 145 294-444 113-258 (377)
34 3s95_A LIMK-1, LIM domain kina 99.9 3E-26 1E-30 219.8 14.3 143 295-444 10-153 (310)
35 3tki_A Serine/threonine-protei 99.9 1.2E-26 3.9E-31 224.3 11.5 143 295-444 7-150 (323)
36 1luf_A Muscle-specific tyrosin 99.9 1.2E-26 4E-31 225.6 10.6 152 290-444 42-219 (343)
37 2nru_A Interleukin-1 receptor- 99.9 1E-25 3.4E-30 215.7 16.9 159 281-444 11-178 (307)
38 3txo_A PKC-L, NPKC-ETA, protei 99.9 1.9E-26 6.6E-31 225.3 12.1 146 292-444 20-169 (353)
39 2c30_A Serine/threonine-protei 99.9 6.3E-26 2.2E-30 218.9 15.2 153 283-444 23-186 (321)
40 1fot_A TPK1 delta, CAMP-depend 99.9 3.6E-26 1.2E-30 220.2 13.2 143 295-444 6-151 (318)
41 4hcu_A Tyrosine-protein kinase 99.9 4.4E-26 1.5E-30 214.1 13.1 142 295-444 10-151 (269)
42 3l9p_A Anaplastic lymphoma kin 99.9 3E-26 1E-30 225.4 12.1 147 295-444 71-229 (367)
43 4fr4_A YANK1, serine/threonine 99.9 3.6E-26 1.2E-30 225.5 12.7 143 295-444 15-160 (384)
44 1xjd_A Protein kinase C, theta 99.9 3.2E-26 1.1E-30 223.0 12.1 147 291-444 13-163 (345)
45 4dc2_A Protein kinase C IOTA t 99.9 3.8E-26 1.3E-30 226.2 12.5 144 294-444 51-198 (396)
46 4eqm_A Protein kinase; transfe 99.9 5.7E-26 1.9E-30 216.4 13.0 143 295-444 11-156 (294)
47 2yab_A Death-associated protei 99.9 7.6E-26 2.6E-30 221.7 14.2 144 294-444 11-164 (361)
48 2pmi_A Negative RE, cyclin-dep 99.9 8.4E-26 2.9E-30 217.6 14.0 147 294-444 4-153 (317)
49 1rdq_E PKA C-alpha, CAMP-depen 99.9 6.1E-26 2.1E-30 221.6 13.1 143 295-444 41-186 (350)
50 3gen_A Tyrosine-protein kinase 99.9 7.8E-26 2.7E-30 213.9 13.1 143 294-444 23-165 (283)
51 3sxs_A Cytoplasmic tyrosine-pr 99.9 6.8E-26 2.3E-30 212.6 12.6 143 294-444 7-149 (268)
52 3a8x_A Protein kinase C IOTA t 99.9 7E-26 2.4E-30 220.7 13.0 143 295-444 9-155 (345)
53 3vhe_A Vascular endothelial gr 99.9 1.4E-26 4.9E-31 226.6 8.1 157 285-444 12-238 (359)
54 3niz_A Rhodanese family protei 99.9 7.4E-26 2.5E-30 217.4 13.0 144 294-444 20-164 (311)
55 3a62_A Ribosomal protein S6 ki 99.9 5.1E-26 1.7E-30 220.1 11.8 144 294-444 16-166 (327)
56 3c0i_A Peripheral plasma membr 99.9 4.2E-26 1.4E-30 222.9 11.0 148 294-444 23-178 (351)
57 1ogq_A PGIP-2, polygalacturona 99.9 1.1E-25 3.8E-30 216.4 13.5 174 22-197 2-185 (313)
58 2ivs_A Proto-oncogene tyrosine 99.9 5.4E-26 1.9E-30 218.1 11.3 148 294-444 22-195 (314)
59 3gni_B Strad alpha; kinase fol 99.9 1.2E-25 3.9E-30 222.8 13.7 146 294-444 24-173 (389)
60 1tki_A Titin; serine kinase, m 99.9 1.4E-25 4.8E-30 216.4 13.8 143 294-444 4-149 (321)
61 1ob3_A PFPK5, cell division co 99.9 9.9E-26 3.4E-30 213.9 12.4 143 295-444 2-145 (288)
62 3tt0_A Basic fibroblast growth 99.9 8.3E-26 2.8E-30 223.4 12.2 148 294-444 68-236 (382)
63 2i0e_A Protein kinase C-beta I 99.9 7.9E-26 2.7E-30 220.9 11.8 145 293-444 18-166 (353)
64 3is5_A Calcium-dependent prote 99.9 8.9E-26 3.1E-30 214.0 11.7 147 295-444 22-172 (285)
65 3p86_A Serine/threonine-protei 99.9 6.3E-26 2.2E-30 217.7 10.7 149 291-444 33-184 (309)
66 3uqc_A Probable conserved tran 99.9 1.2E-25 4.1E-30 213.3 12.5 140 295-443 31-173 (286)
67 4euu_A Serine/threonine-protei 99.9 1.4E-25 4.9E-30 216.0 13.2 146 295-444 9-161 (319)
68 1opk_A P150, C-ABL, proto-onco 99.9 1E-25 3.5E-30 230.2 12.7 144 294-444 219-363 (495)
69 2y0a_A Death-associated protei 99.9 1.9E-25 6.3E-30 216.1 13.7 143 295-444 11-163 (326)
70 2zv2_A Calcium/calmodulin-depe 99.9 1.1E-25 3.8E-30 214.6 11.8 142 295-444 13-182 (298)
71 3o0g_A Cell division protein k 99.9 1.9E-25 6.5E-30 212.3 13.3 143 295-444 2-146 (292)
72 3soc_A Activin receptor type-2 99.9 9.1E-26 3.1E-30 217.8 10.7 143 294-444 23-176 (322)
73 1qcf_A Haematopoetic cell kina 99.9 9.5E-26 3.2E-30 228.0 11.3 144 293-444 186-329 (454)
74 3uc3_A Serine/threonine-protei 99.9 2.1E-25 7E-30 218.8 13.3 142 294-444 19-163 (361)
75 3h4j_B AMPK kdaid, SNF1-like p 99.9 1E-25 3.4E-30 218.7 10.8 142 295-444 9-153 (336)
76 4e5w_A Tyrosine-protein kinase 99.9 1.7E-25 5.9E-30 213.4 12.2 144 295-444 21-171 (302)
77 1rjb_A FL cytokine receptor; k 99.9 1.4E-25 4.9E-30 218.2 11.7 151 292-445 42-218 (344)
78 2pvf_A Fibroblast growth facto 99.9 2.2E-25 7.6E-30 216.2 13.0 149 293-444 33-202 (334)
79 1k9a_A Carboxyl-terminal SRC k 99.9 2.2E-25 7.6E-30 225.0 13.4 143 293-444 191-334 (450)
80 2bdw_A Hypothetical protein K1 99.9 2E-25 6.9E-30 218.9 12.8 145 293-444 27-176 (362)
81 2y94_A 5'-AMP-activated protei 99.9 2.1E-25 7.1E-30 226.0 13.2 143 295-444 16-161 (476)
82 3c4z_A Rhodopsin kinase; Ser/T 99.9 2.5E-25 8.7E-30 228.1 13.7 147 295-444 185-334 (543)
83 2r5t_A Serine/threonine-protei 99.9 1.2E-25 4E-30 221.3 10.5 143 295-444 38-184 (373)
84 4ejn_A RAC-alpha serine/threon 99.9 6.5E-26 2.2E-30 228.8 8.8 144 294-444 147-294 (446)
85 1mp8_A Focal adhesion kinase 1 99.9 1.8E-25 6.1E-30 211.3 11.1 144 294-444 14-161 (281)
86 3e7e_A HBUB1, BUB1A, mitotic c 99.9 1.7E-25 5.7E-30 219.8 11.3 145 293-444 63-228 (365)
87 2acx_A G protein-coupled recep 99.9 2.5E-25 8.5E-30 228.9 13.0 146 294-444 183-331 (576)
88 3ork_A Serine/threonine protei 99.9 7.3E-26 2.5E-30 217.3 8.3 144 294-444 11-161 (311)
89 3kmu_A ILK, integrin-linked ki 99.9 1.9E-25 6.6E-30 209.4 10.9 146 295-444 10-158 (271)
90 1p4o_A Insulin-like growth fac 99.9 1E-25 3.4E-30 217.2 9.2 153 289-444 19-183 (322)
91 2yex_A Serine/threonine-protei 99.9 3.3E-25 1.1E-29 208.6 12.5 144 294-444 6-150 (276)
92 2vuw_A Serine/threonine-protei 99.9 1.8E-26 6.2E-31 224.0 3.9 142 294-444 19-227 (336)
93 1t46_A HOMO sapiens V-KIT hard 99.9 1.7E-25 5.8E-30 214.5 10.6 148 294-444 22-190 (313)
94 3poz_A Epidermal growth factor 99.9 1.6E-25 5.5E-30 216.6 10.4 143 295-444 15-162 (327)
95 3ugc_A Tyrosine-protein kinase 99.9 9.9E-26 3.4E-30 214.6 8.6 144 294-444 9-159 (295)
96 2eue_A Carbon catabolite derep 99.9 7.3E-25 2.5E-29 206.4 14.4 142 295-444 13-157 (275)
97 3t9t_A Tyrosine-protein kinase 99.9 3.5E-25 1.2E-29 207.4 12.1 142 295-444 8-149 (267)
98 3soa_A Calcium/calmodulin-depe 99.9 2.9E-25 9.9E-30 223.3 12.3 145 293-444 9-158 (444)
99 1x8b_A WEE1HU, WEE1-like prote 99.9 2.9E-25 9.8E-30 210.0 11.4 148 294-444 10-179 (289)
100 2i1m_A Macrophage colony-stimu 99.9 5.8E-26 2E-30 220.0 6.8 151 291-444 42-209 (333)
101 3p1a_A MYT1 kinase, membrane-a 99.9 3E-25 1E-29 213.1 11.5 144 294-444 56-202 (311)
102 1fmk_A C-SRC, P60-SRC, tyrosin 99.9 2.1E-25 7.2E-30 225.3 10.8 143 294-444 183-325 (452)
103 2ac3_A MAP kinase-interacting 99.9 1.1E-24 3.9E-29 209.3 15.1 142 295-444 12-159 (316)
104 3fdn_A Serine/threonine-protei 99.9 3.5E-25 1.2E-29 209.0 11.3 144 294-444 8-154 (279)
105 3rp9_A Mitogen-activated prote 99.9 4.1E-25 1.4E-29 223.7 12.4 142 295-444 53-201 (458)
106 1mqb_A Ephrin type-A receptor 99.9 4.2E-25 1.4E-29 214.2 11.9 144 295-444 44-192 (333)
107 3q4u_A Activin receptor type-1 99.9 5.2E-25 1.8E-29 209.9 12.4 138 294-444 7-158 (301)
108 4eut_A Serine/threonine-protei 99.9 4.3E-25 1.5E-29 219.3 12.2 147 295-445 9-162 (396)
109 2w4o_A Calcium/calmodulin-depe 99.9 4.1E-25 1.4E-29 215.7 11.7 141 294-444 52-196 (349)
110 3qup_A Tyrosine-protein kinase 99.9 3.8E-25 1.3E-29 213.3 11.4 150 292-444 20-182 (323)
111 1fvr_A Tyrosine-protein kinase 99.9 4.8E-25 1.7E-29 213.1 12.0 147 295-444 25-187 (327)
112 3kex_A Receptor tyrosine-prote 99.9 2.6E-25 8.7E-30 214.9 10.0 143 295-444 13-160 (325)
113 3lxp_A Non-receptor tyrosine-p 99.9 8.3E-25 2.8E-29 210.7 13.5 140 297-444 33-179 (318)
114 4agu_A Cyclin-dependent kinase 99.9 6.6E-25 2.3E-29 210.4 12.6 143 295-444 3-147 (311)
115 1vzo_A Ribosomal protein S6 ki 99.9 2.2E-25 7.6E-30 218.1 9.4 143 295-444 54-204 (355)
116 3dls_A PAS domain-containing s 99.9 3.1E-25 1.1E-29 215.3 10.4 145 293-444 22-175 (335)
117 3cok_A Serine/threonine-protei 99.9 7.8E-25 2.7E-29 206.4 12.6 144 295-444 11-157 (278)
118 4fvq_A Tyrosine-protein kinase 99.9 3.9E-25 1.3E-29 209.6 10.6 144 294-444 7-166 (289)
119 3eqc_A Dual specificity mitoge 99.9 4.4E-25 1.5E-29 216.3 11.3 144 295-444 33-177 (360)
120 3c1x_A Hepatocyte growth facto 99.9 3.9E-25 1.3E-29 217.8 10.9 142 297-444 91-237 (373)
121 2a2a_A Death-associated protei 99.9 7.6E-25 2.6E-29 211.2 12.8 144 294-444 11-164 (321)
122 3mtl_A Cell division protein k 99.9 2.2E-25 7.7E-30 215.2 8.8 143 295-444 2-145 (324)
123 1kob_A Twitchin; kinase, intra 99.9 9.5E-25 3.3E-29 215.8 13.5 144 294-444 50-196 (387)
124 2xir_A Vascular endothelial gr 99.9 2E-25 6.7E-30 214.4 8.2 157 285-444 17-193 (316)
125 3pg1_A Mitogen-activated prote 99.9 9.3E-25 3.2E-29 214.1 13.2 153 285-444 12-179 (362)
126 3gxj_A TGF-beta receptor type- 99.9 3.6E-25 1.2E-29 211.1 9.8 137 295-444 3-153 (303)
127 4f0f_A Serine/threonine-protei 99.9 1.8E-24 6.2E-29 204.9 14.5 142 295-444 19-174 (287)
128 2rku_A Serine/threonine-protei 99.9 8.8E-25 3E-29 207.9 12.4 143 295-444 15-160 (294)
129 2buj_A Serine/threonine-protei 99.9 5.4E-25 1.9E-29 211.6 11.1 147 294-444 28-179 (317)
130 2h8h_A Proto-oncogene tyrosine 99.9 2.8E-25 9.7E-30 229.0 9.7 144 293-444 265-408 (535)
131 1qpc_A LCK kinase; alpha beta 99.9 2.3E-25 7.9E-30 210.2 8.3 143 294-444 12-154 (279)
132 3f3z_A Calcium/calmodulin-depe 99.9 1.2E-24 4.1E-29 205.0 13.0 143 294-444 8-154 (277)
133 3kfa_A Tyrosine-protein kinase 99.9 5.7E-25 2E-29 208.4 10.8 145 293-444 11-156 (288)
134 2owb_A Serine/threonine-protei 99.9 8.7E-25 3E-29 212.1 12.3 143 295-444 41-186 (335)
135 2ozo_A Tyrosine-protein kinase 99.9 6.9E-25 2.4E-29 229.4 12.5 136 302-444 343-481 (613)
136 3f66_A Hepatocyte growth facto 99.9 8.1E-25 2.8E-29 208.4 11.9 144 295-444 25-173 (298)
137 3lb7_A RAF proto-oncogene seri 99.9 1.8E-24 6.1E-29 207.4 14.3 142 294-444 35-177 (307)
138 2izr_A Casein kinase I isoform 99.9 7.6E-25 2.6E-29 212.0 11.8 140 295-444 9-155 (330)
139 3a7i_A MST3 kinase, serine/thr 99.9 1.3E-24 4.6E-29 207.5 13.3 142 295-444 22-164 (303)
140 3bhy_A Death-associated protei 99.9 1.3E-24 4.5E-29 205.3 13.1 143 295-444 5-157 (283)
141 2h6d_A 5'-AMP-activated protei 99.9 1E-24 3.4E-29 205.4 12.2 143 295-444 11-156 (276)
142 2vwi_A Serine/threonine-protei 99.9 7E-25 2.4E-29 209.1 11.2 151 291-444 11-166 (303)
143 3pls_A Macrophage-stimulating 99.9 1.1E-24 3.6E-29 207.5 12.2 142 297-444 23-169 (298)
144 3i6u_A CDS1, serine/threonine- 99.9 1E-24 3.5E-29 218.1 12.6 144 293-444 133-287 (419)
145 1u59_A Tyrosine-protein kinase 99.9 8.9E-25 3E-29 207.2 11.5 142 296-444 10-155 (287)
146 3pfq_A PKC-B, PKC-beta, protei 99.9 1.1E-24 3.6E-29 230.2 13.3 145 293-444 339-487 (674)
147 3kk8_A Calcium/calmodulin depe 99.9 1.3E-24 4.4E-29 205.5 12.5 144 294-444 5-153 (284)
148 2h34_A Serine/threonine-protei 99.9 1.5E-24 5.1E-29 208.0 13.0 144 294-444 33-179 (309)
149 3kn6_A Ribosomal protein S6 ki 99.9 2.3E-24 8E-29 208.3 14.4 134 300-444 16-154 (325)
150 3hko_A Calcium/calmodulin-depe 99.9 5E-25 1.7E-29 214.4 9.6 151 291-444 22-215 (345)
151 1u5q_A Serine/threonine protei 99.9 7.1E-25 2.4E-29 213.9 10.7 143 295-444 54-199 (348)
152 2vgo_A Serine/threonine-protei 99.9 1.3E-24 4.4E-29 205.6 12.1 143 295-444 14-159 (284)
153 2yfx_A Tyrosine-protein kinase 99.9 1.5E-24 5.1E-29 209.6 12.7 148 294-444 29-188 (327)
154 2x4f_A Myosin light chain kina 99.9 1.3E-24 4.4E-29 214.0 12.5 138 300-444 94-234 (373)
155 2w5a_A Serine/threonine-protei 99.9 7.5E-25 2.6E-29 206.6 10.3 147 295-444 6-161 (279)
156 3llt_A Serine/threonine kinase 99.9 5.9E-25 2E-29 215.3 9.9 154 283-444 23-207 (360)
157 2wqm_A Serine/threonine-protei 99.9 1.2E-24 4.2E-29 208.5 11.5 147 295-444 32-181 (310)
158 2pml_X PFPK7, Ser/Thr protein 99.9 1.1E-24 3.9E-29 212.1 11.5 145 294-444 30-197 (348)
159 3n9x_A Phosphotransferase; mal 99.9 1.4E-24 4.8E-29 218.1 12.2 143 294-444 25-174 (432)
160 3q5i_A Protein kinase; CDPK, m 99.9 2.2E-24 7.6E-29 220.9 13.9 144 294-444 35-194 (504)
161 2j7t_A Serine/threonine-protei 99.9 2.4E-24 8.3E-29 205.5 13.2 144 294-444 18-162 (302)
162 2y7j_A Phosphorylase B kinase 99.9 2.9E-24 9.8E-29 211.0 13.9 149 289-444 88-245 (365)
163 3lzb_A Epidermal growth factor 99.9 1.2E-24 4.2E-29 210.3 11.1 143 295-444 15-162 (327)
164 3dtc_A Mitogen-activated prote 99.9 1.8E-24 6.3E-29 203.0 11.8 144 295-444 7-161 (271)
165 4aaa_A Cyclin-dependent kinase 99.9 1.9E-24 6.4E-29 209.3 12.1 143 295-444 25-169 (331)
166 3brb_A Proto-oncogene tyrosine 99.9 9.3E-25 3.2E-29 209.6 9.8 152 290-444 29-192 (313)
167 3g33_A Cell division protein k 99.9 3.8E-24 1.3E-28 205.0 13.9 146 293-444 7-165 (308)
168 3cc6_A Protein tyrosine kinase 99.9 1.4E-24 4.7E-29 205.1 10.8 144 294-444 11-158 (281)
169 1ua2_A CAK, cell division prot 99.9 2E-24 6.8E-29 210.6 11.9 145 293-444 8-157 (346)
170 3gbz_A Kinase, CMGC CDK; ssgci 99.9 1.4E-24 4.8E-29 210.1 10.7 144 293-444 32-182 (329)
171 3oz6_A Mitogen-activated prote 99.9 3.1E-24 1.1E-28 212.5 13.4 143 293-444 7-154 (388)
172 3nyv_A Calmodulin-domain prote 99.9 2.4E-24 8.2E-29 219.6 12.9 144 294-444 25-174 (484)
173 3an0_A Dual specificity mitoge 99.9 2E-24 6.9E-29 209.8 11.6 148 294-444 50-199 (340)
174 3lxl_A Tyrosine-protein kinase 99.9 1.4E-24 4.9E-29 209.8 10.4 143 295-444 23-172 (327)
175 1cm8_A Phosphorylated MAP kina 99.9 1.9E-24 6.6E-29 212.4 11.4 141 295-444 25-173 (367)
176 3lij_A Calcium/calmodulin depe 99.9 2.7E-24 9.1E-29 219.8 12.7 143 295-444 37-184 (494)
177 1xbb_A Tyrosine-protein kinase 99.9 9.8E-25 3.4E-29 207.3 8.6 143 294-444 15-162 (291)
178 2qr7_A Ribosomal protein S6 ki 99.9 2.5E-24 8.4E-29 209.5 11.5 140 293-444 20-165 (342)
179 2a19_B Interferon-induced, dou 99.9 1.8E-24 6.3E-29 204.3 10.2 141 294-444 10-167 (284)
180 2ycf_A Serine/threonine-protei 99.9 2.9E-24 1E-28 207.1 11.7 143 294-444 9-162 (322)
181 2r3i_A Cell division protein k 99.9 4.6E-24 1.6E-28 203.2 12.9 144 295-444 3-148 (299)
182 2eva_A TAK1 kinase - TAB1 chim 99.9 2.7E-24 9.2E-29 206.1 11.3 143 295-444 8-151 (307)
183 1zy4_A Serine/threonine-protei 99.9 2E-24 6.7E-29 205.8 10.3 143 294-444 5-161 (303)
184 3ttj_A Mitogen-activated prote 99.9 2.1E-24 7.4E-29 218.4 11.1 141 294-444 61-209 (464)
185 1phk_A Phosphorylase kinase; g 99.9 3.7E-24 1.3E-28 203.8 12.1 144 294-444 16-169 (298)
186 4fl3_A Tyrosine-protein kinase 99.9 3.1E-24 1.1E-28 225.1 12.6 136 301-444 375-514 (635)
187 2w1i_A JAK2; chromosomal rearr 99.9 3.2E-24 1.1E-28 207.2 11.8 143 295-444 41-190 (326)
188 3mwu_A Calmodulin-domain prote 99.9 3.1E-24 1E-28 218.9 12.2 144 294-444 21-169 (486)
189 3eb0_A Putative uncharacterize 99.9 1.9E-24 6.5E-29 213.7 10.3 145 291-444 3-187 (383)
190 3mi9_A Cell division protein k 99.9 5.8E-24 2E-28 207.6 13.6 143 295-444 17-169 (351)
191 2wtk_C Serine/threonine-protei 99.9 7.9E-24 2.7E-28 202.2 14.2 145 294-444 4-154 (305)
192 3dbq_A Dual specificity protei 99.9 2.5E-24 8.6E-29 209.6 10.9 141 295-444 9-152 (343)
193 3byv_A Rhoptry kinase; malaria 99.9 5.7E-25 1.9E-29 217.0 6.4 146 295-444 73-251 (377)
194 1t4h_A Serine/threonine-protei 99.9 5.6E-24 1.9E-28 201.9 12.9 141 297-444 28-177 (290)
195 3og7_A AKAP9-BRAF fusion prote 99.9 2.7E-24 9.2E-29 204.1 10.6 143 293-444 22-165 (289)
196 3mdy_A Bone morphogenetic prot 99.9 7E-24 2.4E-28 205.4 13.5 144 291-444 33-187 (337)
197 2clq_A Mitogen-activated prote 99.9 1.2E-23 4E-28 200.0 14.8 144 296-444 23-168 (295)
198 1b6c_B TGF-B superfamily recep 99.9 7.1E-24 2.4E-28 205.9 13.4 141 291-444 38-192 (342)
199 1nxk_A MAP kinase-activated pr 99.9 3.3E-24 1.1E-28 213.1 11.2 139 295-444 61-209 (400)
200 2jam_A Calcium/calmodulin-depe 99.9 4E-24 1.4E-28 204.4 11.3 143 294-444 8-154 (304)
201 3fme_A Dual specificity mitoge 99.9 2.9E-24 9.8E-29 203.6 10.1 148 294-444 6-155 (290)
202 3qyz_A Mitogen-activated prote 99.9 4.5E-24 1.5E-28 209.5 11.6 142 294-444 26-173 (364)
203 3com_A Serine/threonine-protei 99.9 8.5E-24 2.9E-28 202.9 13.1 143 293-444 27-170 (314)
204 2b9h_A MAP kinase FUS3, mitoge 99.9 5.2E-24 1.8E-28 207.8 11.8 142 294-444 10-157 (353)
205 3op5_A Serine/threonine-protei 99.9 2.5E-24 8.5E-29 211.3 9.3 144 294-444 34-199 (364)
206 1byg_A CSK, protein (C-termina 99.9 2.6E-24 9.1E-29 202.9 8.7 142 294-444 20-162 (278)
207 3nsz_A CK II alpha, casein kin 99.9 9.5E-24 3.3E-28 204.0 12.8 136 295-444 36-176 (330)
208 2zmd_A Dual specificity protei 99.9 6E-24 2.1E-28 210.5 11.5 141 295-444 56-199 (390)
209 1csn_A Casein kinase-1; phosph 99.9 1.2E-23 4E-28 200.3 13.0 141 294-444 9-156 (298)
210 2x7f_A TRAF2 and NCK-interacti 99.9 1.8E-24 6.1E-29 208.8 7.3 147 291-444 20-174 (326)
211 3g2f_A Bone morphogenetic prot 99.9 6.2E-24 2.1E-28 205.9 10.7 141 294-444 12-165 (336)
212 2fst_X Mitogen-activated prote 99.9 5.7E-24 1.9E-28 209.0 10.3 141 295-444 29-177 (367)
213 3lm5_A Serine/threonine-protei 99.9 8.7E-24 3E-28 204.3 11.5 149 291-444 24-179 (327)
214 2pzi_A Probable serine/threoni 99.9 4.1E-24 1.4E-28 226.7 9.7 140 295-444 80-226 (681)
215 2j0j_A Focal adhesion kinase 1 99.9 8.2E-24 2.8E-28 222.8 11.8 145 293-444 388-536 (656)
216 3m2w_A MAP kinase-activated pr 99.9 1.1E-23 3.8E-28 200.9 11.6 139 295-444 17-165 (299)
217 2wei_A Calmodulin-domain prote 99.9 2.1E-23 7.1E-28 197.7 13.3 145 293-444 20-169 (287)
218 2xrw_A Mitogen-activated prote 99.9 1.3E-23 4.4E-28 206.8 11.7 140 295-444 25-172 (371)
219 1u46_A ACK-1, activated CDC42 99.9 8.5E-24 2.9E-28 200.5 9.4 143 295-444 18-166 (291)
220 3rgz_A Protein brassinosteroid 99.9 2.2E-23 7.5E-28 224.1 13.3 175 18-196 4-210 (768)
221 2i6l_A Mitogen-activated prote 99.9 2.1E-23 7.2E-28 200.3 11.6 140 295-444 11-166 (320)
222 1blx_A Cyclin-dependent kinase 99.9 2E-23 6.8E-28 201.3 11.0 146 293-444 9-165 (326)
223 4exu_A Mitogen-activated prote 99.9 2.3E-23 8E-28 205.0 11.7 140 295-444 42-189 (371)
224 2v62_A Serine/threonine-protei 99.9 7.2E-24 2.5E-28 206.5 7.9 142 295-444 37-198 (345)
225 3e3p_A Protein kinase, putativ 99.9 3.3E-23 1.1E-27 202.7 12.6 151 288-444 16-177 (360)
226 2y4i_B KSR2, HKSR2, kinase sup 99.9 1.2E-23 4.1E-28 202.3 9.1 144 292-444 30-174 (319)
227 1j1b_A Glycogen synthase kinas 99.9 1.4E-23 4.9E-28 209.9 9.8 140 296-444 55-202 (420)
228 3coi_A Mitogen-activated prote 99.9 3E-23 1E-27 202.7 11.5 140 295-444 24-171 (353)
229 3q60_A ROP5B; pseudokinase, tr 99.9 1.2E-23 4.1E-28 207.0 8.7 141 296-444 63-239 (371)
230 3kvw_A DYRK2, dual specificity 99.9 3.2E-23 1.1E-27 207.9 11.8 142 295-444 97-247 (429)
231 2iwi_A Serine/threonine-protei 99.9 7.6E-24 2.6E-28 203.1 6.7 147 291-444 27-185 (312)
232 3ll6_A Cyclin G-associated kin 99.9 2.2E-23 7.4E-28 201.8 9.9 145 294-444 27-183 (337)
233 2jii_A Serine/threonine-protei 99.9 8.1E-24 2.8E-28 206.7 6.2 138 295-444 42-206 (352)
234 4e7w_A Glycogen synthase kinas 99.9 2.4E-23 8.3E-28 206.5 9.4 141 295-444 40-187 (394)
235 3a99_A Proto-oncogene serine/t 99.9 2.2E-23 7.4E-28 201.0 8.6 145 293-444 41-195 (320)
236 3rgf_A Cyclin-dependent kinase 99.9 4.8E-23 1.6E-27 205.1 11.3 142 296-444 21-177 (405)
237 4azs_A Methyltransferase WBDD; 99.9 2.8E-23 9.5E-28 214.9 9.8 132 303-444 242-384 (569)
238 4hgt_A Casein kinase I isoform 99.9 1.2E-22 4.3E-27 192.8 12.9 142 293-444 7-153 (296)
239 3qa8_A MGC80376 protein; kinas 99.9 3.1E-23 1.1E-27 215.7 8.7 147 295-445 14-170 (676)
240 3aln_A Dual specificity mitoge 99.9 8.4E-23 2.9E-27 197.2 10.8 148 294-444 21-171 (327)
241 3uzp_A CKI-delta, CKID, casein 99.9 1.6E-22 5.4E-27 192.2 12.4 141 294-444 8-153 (296)
242 1z57_A Dual specificity protei 99.9 9.6E-23 3.3E-27 197.2 10.8 143 294-444 13-182 (339)
243 3cek_A Dual specificity protei 99.9 7.8E-23 2.7E-27 196.2 10.0 143 293-444 26-171 (313)
244 3fhr_A MAP kinase-activated pr 99.9 1.5E-22 5.2E-27 196.4 12.0 141 294-444 27-176 (336)
245 3sv0_A Casein kinase I-like; t 99.9 3.1E-22 1.1E-26 203.1 14.4 141 294-444 6-151 (483)
246 4ecn_A Leucine-rich repeat pro 99.9 9.9E-23 3.4E-27 219.3 11.1 171 22-197 265-559 (876)
247 1wak_A Serine/threonine-protei 99.9 8.2E-23 2.8E-27 202.3 9.6 136 294-436 36-184 (397)
248 2dyl_A Dual specificity mitoge 99.9 1.8E-22 6.2E-27 193.8 11.0 144 294-444 24-170 (318)
249 2rio_A Serine/threonine-protei 99.9 1.5E-22 5.2E-27 203.3 9.5 140 297-444 17-173 (434)
250 1zar_A RIO2 kinase; serine kin 99.9 4.5E-22 1.5E-26 188.1 10.3 140 287-445 82-238 (282)
251 3p23_A Serine/threonine-protei 99.9 3E-22 1E-26 200.8 9.2 139 295-444 24-168 (432)
252 2vx3_A Dual specificity tyrosi 99.9 8.3E-22 2.8E-26 194.6 11.7 146 293-444 52-206 (382)
253 4eco_A Uncharacterized protein 99.9 2.3E-22 7.8E-27 211.6 8.0 172 24-197 28-316 (636)
254 2eu9_A Dual specificity protei 99.9 5.8E-22 2E-26 193.1 10.1 143 294-444 18-187 (355)
255 3en9_A Glycoprotease, O-sialog 99.8 2.1E-21 7.1E-26 199.8 11.1 128 299-444 340-474 (540)
256 1q8y_A SR protein kinase; tran 99.8 8.7E-22 3E-26 193.4 7.9 143 295-444 19-183 (373)
257 3rgz_A Protein brassinosteroid 99.8 5.3E-21 1.8E-25 205.6 10.7 139 72-211 613-751 (768)
258 3dzo_A Rhoptry kinase domain; 99.8 5E-21 1.7E-25 191.0 5.5 146 296-445 79-257 (413)
259 4fcg_A Uncharacterized protein 99.8 4.5E-21 1.5E-25 185.4 2.1 172 22-197 23-217 (328)
260 1zth_A RIO1 serine protein kin 99.8 1.3E-19 4.5E-24 169.0 8.3 133 297-445 49-215 (258)
261 3e6j_A Variable lymphocyte rec 99.8 1.4E-18 4.6E-23 159.1 12.5 149 52-201 15-174 (229)
262 2v9t_B SLIT homolog 2 protein 99.8 2.2E-18 7.6E-23 156.7 11.2 146 56-201 11-167 (220)
263 1w8a_A SLIT protein; signaling 99.8 6.8E-19 2.3E-23 156.6 6.9 148 56-203 8-166 (192)
264 1ogq_A PGIP-2, polygalacturona 99.8 1.8E-18 6.2E-23 165.9 9.9 138 68-208 175-312 (313)
265 2o6s_A Variable lymphocyte rec 99.7 6E-18 2.1E-22 152.3 12.4 147 55-201 6-163 (208)
266 2v70_A SLIT-2, SLIT homolog 2 99.7 6.1E-18 2.1E-22 153.7 10.8 146 56-201 11-168 (220)
267 4gyi_A RIO2 kinase; protein ki 99.7 6.1E-19 2.1E-23 171.5 3.7 136 296-446 96-262 (397)
268 3oja_A Leucine-rich immune mol 99.7 2.8E-18 9.7E-23 174.6 6.4 143 56-201 109-252 (487)
269 3m19_A Variable lymphocyte rec 99.7 5.1E-17 1.7E-21 150.7 10.5 130 68-197 36-166 (251)
270 2o6r_A Variable lymphocyte rec 99.7 4.1E-17 1.4E-21 142.9 9.2 126 56-181 7-142 (177)
271 3m19_A Variable lymphocyte rec 99.7 2.8E-16 9.6E-21 145.6 11.6 135 67-201 59-194 (251)
272 2o6q_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 146.9 11.0 144 53-196 2-167 (270)
273 3rfs_A Internalin B, repeat mo 99.6 7.5E-16 2.6E-20 144.5 12.0 127 68-196 64-191 (272)
274 2wfh_A SLIT homolog 2 protein 99.6 5.6E-16 1.9E-20 137.7 10.5 108 92-200 32-140 (193)
275 1w8a_A SLIT protein; signaling 99.6 7.4E-16 2.5E-20 136.8 10.4 129 70-201 11-141 (192)
276 2v70_A SLIT-2, SLIT homolog 2 99.6 7E-16 2.4E-20 140.1 9.3 114 67-180 57-170 (220)
277 4g8a_A TOLL-like receptor 4; l 99.6 1E-15 3.4E-20 160.4 10.0 131 67-197 52-184 (635)
278 1p9a_G Platelet glycoprotein I 99.6 2.8E-15 9.4E-20 142.1 11.6 128 67-197 55-183 (290)
279 2wfh_A SLIT homolog 2 protein 99.6 4.2E-15 1.4E-19 132.0 11.5 123 56-179 10-142 (193)
280 2je0_A Acidic leucine-rich nuc 99.6 6.3E-16 2.2E-20 131.3 5.8 112 67-180 17-130 (149)
281 3v47_A TOLL-like receptor 5B a 99.6 2.4E-15 8.2E-20 151.5 10.8 136 67-202 275-411 (455)
282 2xot_A Amphoterin-induced prot 99.6 2E-15 6.8E-20 147.7 9.4 141 56-196 18-173 (361)
283 2ell_A Acidic leucine-rich nuc 99.6 9.5E-16 3.3E-20 132.9 6.3 129 67-197 24-158 (168)
284 2o6q_A Variable lymphocyte rec 99.6 6.1E-15 2.1E-19 138.2 11.7 131 67-197 61-192 (270)
285 3v47_A TOLL-like receptor 5B a 99.6 2.6E-15 9E-20 151.2 9.3 144 54-197 6-165 (455)
286 1ozn_A Reticulon 4 receptor; N 99.6 2.8E-15 9.7E-20 141.5 8.8 131 67-197 80-212 (285)
287 2z81_A CD282 antigen, TOLL-lik 99.6 1.8E-15 6E-20 156.2 7.6 142 55-197 3-159 (549)
288 2v9t_B SLIT homolog 2 protein 99.6 4.8E-15 1.6E-19 134.5 9.5 112 67-178 56-167 (220)
289 4fcg_A Uncharacterized protein 99.6 3.2E-15 1.1E-19 144.2 8.6 130 67-198 150-289 (328)
290 1ozn_A Reticulon 4 receptor; N 99.6 7.6E-15 2.6E-19 138.5 10.5 142 56-197 18-164 (285)
291 3g39_A Variable lymphocyte rec 99.6 7.7E-15 2.6E-19 127.6 9.6 109 70-181 12-120 (170)
292 3rfs_A Internalin B, repeat mo 99.6 1.3E-14 4.4E-19 136.1 11.4 135 67-201 85-220 (272)
293 2z66_A Variable lymphocyte rec 99.6 7.2E-15 2.5E-19 140.1 9.7 131 67-197 101-234 (306)
294 2o6r_A Variable lymphocyte rec 99.5 2.5E-14 8.4E-19 125.1 11.7 129 69-200 9-138 (177)
295 2o6s_A Variable lymphocyte rec 99.5 1.4E-14 4.7E-19 130.2 10.1 115 67-181 52-166 (208)
296 2r9u_A Variable lymphocyte rec 99.5 1.3E-14 4.5E-19 126.6 9.6 109 70-181 15-123 (174)
297 2z80_A TOLL-like receptor 2, v 99.5 5.7E-15 2E-19 143.8 7.9 144 53-197 27-185 (353)
298 4eco_A Uncharacterized protein 99.5 2.5E-15 8.7E-20 157.9 4.9 130 67-197 206-364 (636)
299 3e6j_A Variable lymphocyte rec 99.5 1.9E-14 6.6E-19 131.4 9.5 114 67-181 64-177 (229)
300 3vq2_A TLR4, TOLL-like recepto 99.5 1.2E-14 4.2E-19 151.7 9.3 130 67-196 32-163 (606)
301 2z62_A TOLL-like receptor 4, v 99.5 2E-14 7E-19 134.9 9.5 129 68-196 29-159 (276)
302 1dce_A Protein (RAB geranylger 99.5 2E-14 6.7E-19 148.6 9.9 110 68-182 442-552 (567)
303 3vq2_A TLR4, TOLL-like recepto 99.5 1.2E-14 3.9E-19 151.9 8.1 108 69-176 426-534 (606)
304 2z66_A Variable lymphocyte rec 99.5 2E-14 6.8E-19 137.0 8.6 141 56-197 7-161 (306)
305 3t6q_A CD180 antigen; protein- 99.5 2.4E-14 8.1E-19 149.6 9.8 131 67-197 33-164 (606)
306 3j0a_A TOLL-like receptor 5; m 99.5 1.6E-14 5.5E-19 156.7 8.5 140 56-196 14-158 (844)
307 2id5_A Lingo-1, leucine rich r 99.5 3.8E-14 1.3E-18 143.7 10.6 140 58-197 13-163 (477)
308 1p9a_G Platelet glycoprotein I 99.5 4.1E-14 1.4E-18 134.0 10.0 129 67-198 31-160 (290)
309 4ezg_A Putative uncharacterize 99.5 2.4E-14 8.2E-19 127.5 8.0 124 69-196 46-169 (197)
310 2xot_A Amphoterin-induced prot 99.5 1.3E-14 4.5E-19 141.8 6.7 135 67-201 64-204 (361)
311 3oja_B Anopheles plasmodium-re 99.5 2.9E-14 1E-18 148.8 9.5 129 68-196 52-181 (597)
312 4ezg_A Putative uncharacterize 99.5 3.7E-14 1.3E-18 126.3 8.7 127 67-197 66-192 (197)
313 2z62_A TOLL-like receptor 4, v 99.5 7.6E-14 2.6E-18 131.0 10.5 114 67-180 52-166 (276)
314 3zyi_A Leucine-rich repeat-con 99.5 5E-14 1.7E-18 141.9 9.6 130 67-196 75-206 (452)
315 4g8a_A TOLL-like receptor 4; l 99.5 5.8E-14 2E-18 146.9 10.2 135 67-201 445-582 (635)
316 4ecn_A Leucine-rich repeat pro 99.5 1.7E-14 5.7E-19 155.4 6.2 130 67-198 448-607 (876)
317 4b8c_D Glucose-repressible alc 99.5 2.1E-14 7.3E-19 152.7 6.8 109 69-181 226-334 (727)
318 3j0a_A TOLL-like receptor 5; m 99.5 2.5E-14 8.5E-19 155.2 6.9 130 68-201 427-562 (844)
319 2ifg_A High affinity nerve gro 99.5 7.3E-14 2.5E-18 135.6 9.5 109 56-178 8-118 (347)
320 2ft3_A Biglycan; proteoglycan, 99.5 1.7E-13 5.8E-18 132.2 11.5 139 56-197 33-183 (332)
321 4b8c_D Glucose-repressible alc 99.5 2.9E-14 9.8E-19 151.8 6.5 110 84-197 217-327 (727)
322 3o6n_A APL1; leucine-rich repe 99.5 8.4E-14 2.9E-18 137.4 8.9 131 67-197 45-176 (390)
323 2z63_A TOLL-like receptor 4, v 99.5 1E-13 3.5E-18 143.5 9.9 129 67-196 373-504 (570)
324 3a79_B TLR6, VLRB.59, TOLL-lik 99.5 8.8E-14 3E-18 144.0 9.4 126 67-197 52-180 (562)
325 3o53_A Protein LRIM1, AGAP0063 99.5 1.5E-13 5E-18 131.9 10.3 130 68-200 121-251 (317)
326 1ziw_A TOLL-like receptor 3; i 99.5 1.4E-13 4.7E-18 145.8 11.1 130 67-196 25-155 (680)
327 2xwt_C Thyrotropin receptor; s 99.5 1E-13 3.4E-18 127.3 8.4 129 67-197 31-167 (239)
328 2je0_A Acidic leucine-rich nuc 99.4 1.1E-13 3.9E-18 117.2 7.5 104 67-172 42-149 (149)
329 2ell_A Acidic leucine-rich nuc 99.4 1.7E-13 5.7E-18 118.6 8.6 110 67-178 49-162 (168)
330 3t6q_A CD180 antigen; protein- 99.4 8.8E-14 3E-18 145.2 7.8 115 67-181 400-518 (606)
331 3oja_B Anopheles plasmodium-re 99.4 1.8E-13 6E-18 142.8 10.0 112 67-178 75-186 (597)
332 3zyj_A Leucine-rich repeat-con 99.4 2.4E-13 8.1E-18 136.5 10.5 139 58-196 45-195 (440)
333 1xku_A Decorin; proteoglycan, 99.4 3.1E-13 1.1E-17 130.2 10.9 140 55-197 30-182 (330)
334 1wwl_A Monocyte differentiatio 99.4 5.6E-14 1.9E-18 134.4 5.5 109 67-176 95-214 (312)
335 1a9n_A U2A', U2A'; complex (nu 99.4 1.2E-13 4.1E-18 120.6 6.5 124 67-196 19-150 (176)
336 2z7x_B TOLL-like receptor 1, v 99.4 3.5E-13 1.2E-17 138.1 10.2 129 66-197 323-455 (520)
337 3g39_A Variable lymphocyte rec 99.4 5E-13 1.7E-17 116.0 9.4 101 56-156 9-119 (170)
338 2z63_A TOLL-like receptor 4, v 99.4 2.5E-13 8.5E-18 140.6 8.7 129 68-196 29-159 (570)
339 3o6n_A APL1; leucine-rich repe 99.4 4.4E-13 1.5E-17 132.2 9.8 127 67-196 69-196 (390)
340 2id5_A Lingo-1, leucine rich r 99.4 2.3E-13 7.7E-18 138.0 7.7 130 67-196 56-186 (477)
341 1wwl_A Monocyte differentiatio 99.4 1.3E-13 4.3E-18 132.0 5.1 108 69-177 65-187 (312)
342 3zyj_A Leucine-rich repeat-con 99.4 8.9E-13 3E-17 132.3 10.9 130 67-197 88-218 (440)
343 3cvr_A Invasion plasmid antige 99.4 2E-13 6.9E-18 140.6 6.3 132 46-197 34-171 (571)
344 3zyi_A Leucine-rich repeat-con 99.4 7.9E-13 2.7E-17 133.1 10.5 130 67-197 99-229 (452)
345 2z7x_B TOLL-like receptor 1, v 99.4 3.1E-13 1E-17 138.5 7.6 127 68-197 303-432 (520)
346 3oja_A Leucine-rich immune mol 99.4 2.6E-13 9.1E-18 137.9 7.0 30 336-365 323-352 (487)
347 2z80_A TOLL-like receptor 2, v 99.4 4.2E-13 1.4E-17 130.6 8.2 129 67-196 76-208 (353)
348 2xwt_C Thyrotropin receptor; s 99.4 2.8E-13 9.6E-18 124.3 6.4 129 67-197 55-190 (239)
349 3a79_B TLR6, VLRB.59, TOLL-lik 99.4 7E-13 2.4E-17 137.3 10.1 131 66-198 352-485 (562)
350 2z81_A CD282 antigen, TOLL-lik 99.4 4.8E-13 1.6E-17 137.9 8.0 116 67-182 50-167 (549)
351 1a9n_A U2A', U2A'; complex (nu 99.4 7.7E-13 2.6E-17 115.4 7.5 106 68-177 43-154 (176)
352 2r9u_A Variable lymphocyte rec 99.4 1.4E-12 4.8E-17 113.6 8.9 106 93-201 14-120 (174)
353 1ziw_A TOLL-like receptor 3; i 99.4 4.9E-13 1.7E-17 141.5 7.3 110 68-177 455-574 (680)
354 4glp_A Monocyte differentiatio 99.4 2.2E-13 7.6E-18 130.1 3.8 131 67-198 117-263 (310)
355 1h6t_A Internalin B; cell adhe 99.3 2.2E-12 7.7E-17 122.0 10.1 122 67-197 68-189 (291)
356 1h6t_A Internalin B; cell adhe 99.3 2.4E-12 8.4E-17 121.8 10.2 101 69-177 48-148 (291)
357 4glp_A Monocyte differentiatio 99.3 5E-13 1.7E-17 127.6 5.3 128 67-197 145-283 (310)
358 1xku_A Decorin; proteoglycan, 99.3 3.3E-12 1.1E-16 122.9 10.9 128 67-197 121-251 (330)
359 1xeu_A Internalin C; cellular 99.3 3.7E-12 1.3E-16 118.7 10.8 124 67-200 63-186 (263)
360 1ds9_A Outer arm dynein; leuci 99.3 1.6E-14 5.4E-19 128.8 -5.7 125 68-197 19-151 (198)
361 4fmz_A Internalin; leucine ric 99.3 2.9E-12 1E-16 124.1 9.7 124 67-197 221-344 (347)
362 3tm0_A Aminoglycoside 3'-phosp 99.3 5.7E-12 2E-16 117.2 10.8 142 292-444 11-209 (263)
363 3o53_A Protein LRIM1, AGAP0063 99.3 9.2E-13 3.2E-17 126.2 5.4 119 68-196 59-179 (317)
364 2ft3_A Biglycan; proteoglycan, 99.3 2.9E-12 9.9E-17 123.5 8.8 126 68-196 103-251 (332)
365 1h6u_A Internalin H; cell adhe 99.3 4.1E-12 1.4E-16 121.2 9.6 122 67-197 85-206 (308)
366 1h6u_A Internalin H; cell adhe 99.3 6E-12 2.1E-16 120.1 10.3 122 67-197 63-184 (308)
367 1m9s_A Internalin B; cell inva 99.3 6.3E-12 2.2E-16 130.7 10.1 103 68-178 66-168 (605)
368 1m9s_A Internalin B; cell inva 99.3 7.2E-12 2.4E-16 130.3 9.9 123 67-198 87-209 (605)
369 2ifg_A High affinity nerve gro 99.3 6.6E-12 2.2E-16 121.7 8.7 106 94-201 11-118 (347)
370 1dce_A Protein (RAB geranylger 99.3 1E-11 3.5E-16 128.3 10.0 101 67-170 463-567 (567)
371 1xeu_A Internalin C; cellular 99.3 1E-11 3.6E-16 115.6 8.9 121 67-197 41-161 (263)
372 1o6v_A Internalin A; bacterial 99.2 1.8E-11 6.2E-16 123.6 9.4 122 67-197 243-364 (466)
373 1ds9_A Outer arm dynein; leuci 99.2 1.4E-13 4.6E-18 122.7 -6.3 110 67-181 48-158 (198)
374 1o6v_A Internalin A; bacterial 99.2 3.1E-11 1.1E-15 121.9 9.4 122 67-197 221-342 (466)
375 4fmz_A Internalin; leucine ric 99.2 3E-11 1E-15 116.9 8.6 104 67-176 243-346 (347)
376 3bz5_A Internalin-J, INLJ; leu 99.2 4.5E-11 1.5E-15 120.4 9.7 103 67-180 148-250 (457)
377 3cvr_A Invasion plasmid antige 99.2 2.6E-11 8.8E-16 124.9 7.9 94 67-176 100-193 (571)
378 3bz5_A Internalin-J, INLJ; leu 99.2 5.7E-11 1.9E-15 119.6 10.0 116 68-196 43-158 (457)
379 1nd4_A Aminoglycoside 3'-phosp 99.2 7E-11 2.4E-15 109.3 9.2 126 304-445 29-211 (264)
380 1jl5_A Outer protein YOPM; leu 99.1 1E-10 3.5E-15 117.6 9.7 79 91-177 131-209 (454)
381 2ast_B S-phase kinase-associat 99.1 8.8E-12 3E-16 120.1 1.8 110 67-177 70-183 (336)
382 2ca6_A RAN GTPase-activating p 99.1 1.4E-11 4.7E-16 121.3 2.6 132 67-198 159-315 (386)
383 2ca6_A RAN GTPase-activating p 99.1 6E-12 2.1E-16 123.9 -0.1 131 67-197 122-285 (386)
384 3dxp_A Putative acyl-COA dehyd 99.1 2.1E-10 7.1E-15 111.7 10.8 138 300-444 43-244 (359)
385 2ast_B S-phase kinase-associat 99.1 1E-11 3.5E-16 119.6 1.4 131 67-197 93-233 (336)
386 4ay9_X Follicle-stimulating ho 99.1 7.7E-11 2.6E-15 114.4 6.5 117 56-172 9-137 (350)
387 3goz_A Leucine-rich repeat-con 99.1 7.5E-11 2.6E-15 115.1 5.6 112 67-178 22-153 (362)
388 3goz_A Leucine-rich repeat-con 99.1 5.9E-11 2E-15 115.8 4.8 113 68-180 52-184 (362)
389 1jl5_A Outer protein YOPM; leu 99.0 2.4E-10 8E-15 115.0 6.9 102 68-181 258-377 (454)
390 3g06_A SSPH2 (leucine-rich rep 99.0 3.1E-10 1.1E-14 118.2 7.4 81 91-180 221-301 (622)
391 4ay9_X Follicle-stimulating ho 98.9 8E-10 2.7E-14 107.2 6.0 108 71-181 13-122 (350)
392 3g06_A SSPH2 (leucine-rich rep 98.9 1.5E-09 5E-14 113.1 8.3 74 115-197 221-295 (622)
393 3rw6_A Nuclear RNA export fact 98.9 8.2E-11 2.8E-15 108.9 -2.5 84 96-181 148-238 (267)
394 1z7x_W Ribonuclease inhibitor; 98.8 3.6E-10 1.2E-14 113.6 0.6 131 67-197 256-409 (461)
395 1z7x_W Ribonuclease inhibitor; 98.8 1.5E-10 5.3E-15 116.3 -2.6 131 67-197 227-381 (461)
396 3un9_A NLR family member X1; l 98.8 1.8E-09 6E-14 105.6 3.2 111 67-177 101-225 (372)
397 3rw6_A Nuclear RNA export fact 98.7 6.2E-09 2.1E-13 96.2 4.5 80 88-169 167-257 (267)
398 3un9_A NLR family member X1; l 98.6 3.5E-09 1.2E-13 103.5 0.3 86 91-176 155-252 (372)
399 3d1u_A Putative fructosamine-3 98.6 3.8E-07 1.3E-11 85.7 12.2 75 300-379 20-97 (288)
400 1io0_A Tropomodulin; LRR prote 98.6 1.7E-08 5.7E-13 88.5 2.6 111 66-176 35-164 (185)
401 3r70_A Aminoglycoside phosphot 98.5 2.8E-07 9.6E-12 88.0 10.7 132 296-444 38-233 (320)
402 3sg8_A APH(2'')-ID; antibiotic 98.5 2E-07 6.9E-12 88.3 7.7 132 300-444 25-219 (304)
403 3ogk_B Coronatine-insensitive 98.4 5.1E-08 1.7E-12 101.1 0.7 110 68-177 379-502 (592)
404 4gkh_A Aminoglycoside 3'-phosp 98.4 2E-06 6.9E-11 79.7 11.0 132 301-444 30-219 (272)
405 3ogk_B Coronatine-insensitive 98.3 1.8E-07 6.2E-12 96.9 2.5 104 68-172 139-252 (592)
406 3sb4_A Hypothetical leucine ri 98.3 7.2E-07 2.5E-11 85.4 6.3 89 89-179 224-313 (329)
407 3tdw_A Gentamicin resistance p 98.2 4.1E-06 1.4E-10 79.3 10.6 131 301-444 25-220 (306)
408 3ats_A Putative uncharacterize 98.1 4.2E-06 1.4E-10 80.9 7.7 80 301-380 26-121 (357)
409 3ovc_A Hygromycin-B 4-O-kinase 98.1 8.1E-06 2.8E-10 79.2 9.7 74 300-380 46-122 (362)
410 2p1m_B Transport inhibitor res 98.1 4.8E-07 1.6E-11 93.7 -0.0 130 67-197 372-517 (594)
411 3sb4_A Hypothetical leucine ri 98.0 2.7E-06 9.2E-11 81.4 4.2 101 67-169 226-327 (329)
412 1io0_A Tropomodulin; LRR prote 98.0 1.8E-06 6.1E-11 75.4 2.4 96 82-177 27-137 (185)
413 2ra8_A Uncharacterized protein 98.0 1.8E-06 6.1E-11 83.7 2.5 127 67-196 172-317 (362)
414 2q83_A YTAA protein; 2635576, 98.0 3.2E-05 1.1E-09 74.0 10.7 138 301-444 38-248 (346)
415 2p1m_B Transport inhibitor res 98.0 2.3E-06 8E-11 88.5 2.8 107 67-173 105-221 (594)
416 2olc_A MTR kinase, methylthior 97.9 4.2E-05 1.4E-09 75.1 11.0 76 300-377 35-120 (397)
417 3jr1_A Putative fructosamine-3 97.8 7.6E-05 2.6E-09 70.6 10.7 138 300-443 41-231 (312)
418 3f7w_A Putative fructosamine-3 97.8 0.00014 4.8E-09 67.9 12.2 76 298-378 18-96 (288)
419 2ra8_A Uncharacterized protein 97.7 1.1E-05 3.9E-10 78.1 2.8 126 68-196 140-289 (362)
420 1pgv_A TMD-1, tropomodulin TMD 97.5 6E-05 2.1E-09 65.9 3.7 110 66-175 40-169 (197)
421 2pyw_A Uncharacterized protein 97.5 0.00045 1.5E-08 68.2 10.3 74 300-376 39-122 (420)
422 3e4g_A ATP synthase subunit S, 97.4 4.7E-05 1.6E-09 65.3 2.4 84 67-150 61-150 (176)
423 3e4g_A ATP synthase subunit S, 97.4 3.9E-05 1.3E-09 65.8 1.6 84 91-174 61-150 (176)
424 4fdw_A Leucine rich hypothetic 97.2 0.00033 1.1E-08 68.8 6.0 102 68-173 227-333 (401)
425 3csv_A Aminoglycoside phosphot 97.1 0.0018 6.1E-08 61.6 9.2 76 301-382 24-102 (333)
426 3rfe_A Platelet glycoprotein I 97.1 0.00061 2.1E-08 55.4 5.1 57 94-152 11-68 (130)
427 4fdw_A Leucine rich hypothetic 97.0 0.0022 7.4E-08 62.9 9.7 79 92-173 158-236 (401)
428 3rfe_A Platelet glycoprotein I 97.0 0.0012 4E-08 53.7 6.2 56 71-128 12-68 (130)
429 1zyl_A Hypothetical protein YI 96.8 0.022 7.4E-07 53.7 14.7 75 301-378 32-113 (328)
430 2ppq_A HSK, HK, homoserine kin 96.8 0.0045 1.6E-07 58.3 9.7 156 285-444 7-213 (322)
431 3dxq_A Choline/ethanolamine ki 96.8 0.0028 9.5E-08 59.3 8.1 71 300-379 23-95 (301)
432 1nw1_A Choline kinase (49.2 KD 96.8 0.0027 9.2E-08 62.8 8.1 71 301-378 79-158 (429)
433 3feg_A Choline/ethanolamine ki 96.6 0.0068 2.3E-07 58.7 9.6 138 301-444 56-250 (379)
434 2qg7_A Ethanolamine kinase PV0 96.4 0.017 5.8E-07 57.5 11.1 73 301-379 114-188 (458)
435 1pgv_A TMD-1, tropomodulin TMD 96.4 0.0011 3.8E-08 57.8 2.0 90 84-173 34-136 (197)
436 3c5i_A Choline kinase; choline 96.3 0.0074 2.5E-07 58.2 7.6 72 301-378 39-120 (369)
437 4h09_A Hypothetical leucine ri 95.9 0.016 5.5E-07 55.9 7.6 85 86-172 235-319 (379)
438 4gt6_A Cell surface protein; l 95.7 0.025 8.5E-07 55.0 8.4 82 89-173 286-367 (394)
439 3i1a_A Spectinomycin phosphotr 95.6 0.08 2.7E-06 50.3 11.0 27 418-444 206-232 (339)
440 4gt6_A Cell surface protein; l 95.2 0.026 8.8E-07 54.9 6.4 87 85-176 305-391 (394)
441 4fs7_A Uncharacterized protein 94.9 0.025 8.4E-07 55.0 5.4 82 87-173 272-353 (394)
442 4fs7_A Uncharacterized protein 94.8 0.033 1.1E-06 54.1 5.9 85 86-173 292-376 (394)
443 3f2s_A CK, chetk-alpha, cholin 94.6 0.09 3.1E-06 51.1 8.5 27 418-444 244-276 (401)
444 4h09_A Hypothetical leucine ri 94.5 0.16 5.4E-06 48.8 9.9 82 87-170 259-340 (379)
445 2ks1_B Epidermal growth factor 93.9 0.05 1.7E-06 34.4 3.1 32 231-262 9-40 (44)
446 2l2t_A Receptor tyrosine-prote 93.0 0.05 1.7E-06 34.3 2.1 33 231-263 8-40 (44)
447 3mes_A Choline kinase; malaria 91.9 0.35 1.2E-05 47.4 7.7 73 301-379 76-157 (424)
448 3cxl_A N-chimerin; SH2, RHO-GA 90.7 0.038 1.3E-06 55.1 -0.7 61 300-363 147-215 (463)
449 4ann_A ESSB; membrane protein, 88.9 1.3 4.3E-05 38.8 7.7 81 349-442 42-122 (215)
450 4ano_A ESSB; membrane protein, 87.5 2.3 7.7E-05 37.3 8.5 79 350-442 48-127 (219)
451 3g15_A CK, chetk-alpha, cholin 83.7 0.34 1.2E-05 47.0 1.5 25 420-444 246-276 (401)
452 2k9y_A Ephrin type-A receptor 81.2 0.94 3.2E-05 28.0 2.3 28 233-260 13-40 (41)
453 2jwa_A Receptor tyrosine-prote 80.6 0.73 2.5E-05 29.0 1.6 26 237-262 15-40 (44)
454 2k1k_A Ephrin type-A receptor 65.6 3.3 0.00011 25.1 1.9 11 235-245 12-22 (38)
455 1iij_A ERBB-2 receptor protein 46.0 7.9 0.00027 22.9 1.1 14 247-260 21-34 (35)
456 2l9u_A Receptor tyrosine-prote 36.5 6.8 0.00023 22.8 -0.2 27 235-261 8-34 (40)
457 2klu_A T-cell surface glycopro 34.7 20 0.00068 24.4 1.8 7 256-262 34-40 (70)
458 2lz0_A Uncharacterized protein 24.9 79 0.0027 23.4 4.1 14 110-123 15-28 (100)
459 3ox7_P MH027; urokinase-type p 22.1 21 0.00072 18.0 0.2 9 54-62 6-14 (23)
460 2lz0_A Uncharacterized protein 21.7 1.9E+02 0.0065 21.3 5.7 42 84-126 13-54 (100)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=3.7e-34 Score=273.65 Aligned_cols=146 Identities=25% Similarity=0.405 Sum_probs=127.5
Q ss_pred CCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
+++..+.||+|+||+||+|++. +++.||||+++.........+|.+|+.++++++|||||+++|+|.+++..++
T Consensus 27 ~~~~~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~l 106 (308)
T 4gt4_A 27 AVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSM 106 (308)
T ss_dssp GEEEEEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred HCeEeeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEE
Confidence 3445688999999999999863 4678999999766555556689999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 370 VYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
|||||++|+|.++|+.... ....++|..+..|+.|||+||+|||++ +||||||||+|||||+++.
T Consensus 107 V~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLK~~NILl~~~~~ 183 (308)
T 4gt4_A 107 IFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLN 183 (308)
T ss_dssp EEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGC
T ss_pred EEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCccccceEECCCCC
Confidence 9999999999999975421 123589999999999999999999999 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+||+||-
T Consensus 184 ~Ki~DFG 190 (308)
T 4gt4_A 184 VKISDLG 190 (308)
T ss_dssp EEECCSC
T ss_pred EEECCcc
Confidence 9999995
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=3.7e-34 Score=272.52 Aligned_cols=146 Identities=28% Similarity=0.464 Sum_probs=126.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|.+.+.||+|+||+||+|++. ++..||||+++... .....+|.+|+++|++++|||||+++|+|.+++..+
T Consensus 13 ~~~~l~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 91 (299)
T 4asz_A 13 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-DNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLI 91 (299)
T ss_dssp GGEEEEEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCC-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEeeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCC-hHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEE
Confidence 45667789999999999999863 47789999997542 233457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccC---------CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 369 LVYPYMTNGSVASRLRERQ---------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~---------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
+|||||++|+|.++|+... .....++|.++..|+.|||+||+|||++ +||||||||+|||+|+++.+|
T Consensus 92 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDlKp~NILl~~~~~~K 168 (299)
T 4asz_A 92 MVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRNCLVGENLLVK 168 (299)
T ss_dssp EEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCccCHhhEEECCCCcEE
Confidence 9999999999999998642 1234599999999999999999999999 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 169 i~DFG 173 (299)
T 4asz_A 169 IGDFG 173 (299)
T ss_dssp ECCCS
T ss_pred ECCcc
Confidence 99995
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.3e-33 Score=272.40 Aligned_cols=146 Identities=31% Similarity=0.479 Sum_probs=128.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|...+.||+|+||+||+|+++ +++.||||+++... .....+|.+|+++|++++|||||+++|+|.+.+..+
T Consensus 41 ~d~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~-~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-ESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEEEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCS-HHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHeEEEEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCC-HHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEE
Confidence 34556688999999999999864 47889999997542 333457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCC-----------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 369 LVYPYMTNGSVASRLRERQS-----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~-----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
+|||||++|+|.++++.... ...+++|.++..|+.|||+||+|||++ +||||||||+|||||+++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~---~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTE
T ss_pred EEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcC---CeecccccHhhEEECCCCc
Confidence 99999999999999986432 123589999999999999999999998 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+||+||-
T Consensus 197 ~Ki~DFG 203 (329)
T 4aoj_A 197 VKIGDFG 203 (329)
T ss_dssp EEECCCC
T ss_pred EEEcccc
Confidence 9999995
No 4
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=2.3e-33 Score=271.25 Aligned_cols=145 Identities=21% Similarity=0.316 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+++++.++|||||++++++.+.+..|+|||
T Consensus 24 e~Y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmE 103 (350)
T 4b9d_A 24 EKYVRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMD 103 (350)
T ss_dssp CCEEEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred cceEEeEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEe
Confidence 57888999999999999999964 6999999999654322 234469999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++|+|.+++...+. ..+++..+..|+.||+.||+|||++ +||||||||+||||++++.+||+||-
T Consensus 104 y~~gg~L~~~i~~~~~--~~~~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 170 (350)
T 4b9d_A 104 YCEGGDLFKRINAQKG--VLFQEDQILDWFVQICLALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFG 170 (350)
T ss_dssp CCTTCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TCEETTCCGGGEEECTTCCEEECSTT
T ss_pred CCCCCcHHHHHHHcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCCHHHEEECCCCCEEEcccc
Confidence 9999999999976532 2478889999999999999999999 99999999999999999999999995
No 5
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=265.83 Aligned_cols=142 Identities=30% Similarity=0.420 Sum_probs=124.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.+++...+.||+|+||+||+|++. ..||||+++.... .....+|.+|++++++++|||||+++|++.+ +..++|||
T Consensus 35 ~~~l~l~~~iG~G~fG~Vy~~~~~--~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~-~~~~iVmE 111 (307)
T 3omv_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK-DNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEECCCCSSSEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECS-SSCEEEEE
T ss_pred HHHeEEeeEEeeCCCcEEEEEEEC--CcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEC-CeEEEEEE
Confidence 356677889999999999999975 3699999975432 2234579999999999999999999998865 56899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++|+|.++|+.... .++|..+..|+.|||+||+|||++ +||||||||+|||||+++.+||+||-
T Consensus 112 y~~gGsL~~~l~~~~~---~l~~~~~~~i~~qia~gL~yLH~~---~IiHRDlKp~NILl~~~~~~Ki~DFG 177 (307)
T 3omv_A 112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCSSSEEEETTEEEEECCCS
T ss_pred cCCCCCHHHHHhhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCccCHHHEEECCCCcEEEeecc
Confidence 9999999999976532 489999999999999999999998 99999999999999999999999995
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=2.3e-33 Score=266.79 Aligned_cols=143 Identities=26% Similarity=0.337 Sum_probs=129.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||+||+|+.. +|+.||||+++... .......+.+|+++++.++|||||++++++.+.+..|+||
T Consensus 32 ~dy~i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivm 111 (311)
T 4aw0_A 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111 (311)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cccEEEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 46888999999999999999964 69999999996432 2233457999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||++|+|.++++..+ .+++..+..++.|++.||+|||++ +||||||||+|||+++++.+||+||-
T Consensus 112 Ey~~gG~L~~~i~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDlKPeNILl~~~g~vKl~DFG 177 (311)
T 4aw0_A 112 SYAKNGELLKYIRKIG----SFDETCTRFYTAEIVSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFG 177 (311)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred ecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEEcCCCCEEEEEcC
Confidence 9999999999998754 389999999999999999999999 99999999999999999999999995
No 7
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=99.98 E-value=8.9e-33 Score=266.66 Aligned_cols=141 Identities=25% Similarity=0.353 Sum_probs=127.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.|+..+.||+|+||+||+|+.. +|+.||||+++.... .....+.+|+++|+.++|||||++++++.+.+..|+||||
T Consensus 74 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~-~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 152 (346)
T 4fih_A 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQ-QRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 152 (346)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGC-SSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred HhcEEeEEeecCcCeEEEEEEECCCCCEEEEEEEecCch-hHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeC
Confidence 35777889999999999999965 699999999965432 3344689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++|+|.+++... .+++..+..++.|++.||+|||++ +||||||||+||||++++.+||+||-
T Consensus 153 ~~gg~L~~~l~~~-----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 215 (346)
T 4fih_A 153 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG 215 (346)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEECCCCCEEEecCc
Confidence 9999999999753 289999999999999999999999 99999999999999999999999996
No 8
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.97 E-value=2.6e-32 Score=261.11 Aligned_cols=141 Identities=28% Similarity=0.389 Sum_probs=120.3
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC----ceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----EKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~lv~ 371 (447)
+|...+.||+|+||+||+|++ +|+.||||+++... .....++.|+..+..++|||||+++|+|.+++ ..++||
T Consensus 4 ~i~L~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~--~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~ 80 (303)
T 3hmm_A 4 TIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE--ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVS 80 (303)
T ss_dssp GEEEEEEEEECSSSEEEEEEE-TTEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEE
T ss_pred EEEEEEEEeeCCCeEEEEEEE-CCEEEEEEEECccc--hhhHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEe
Confidence 355668899999999999998 58999999996432 11223455666677899999999999998654 579999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC-----CCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-----CDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-----~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||++|+|.++|+.. .++|..+.+++.|+++||+|||++ +.++||||||||+|||||+++++||+||-
T Consensus 81 Ey~~~gsL~~~l~~~-----~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFG 153 (303)
T 3hmm_A 81 DYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLG 153 (303)
T ss_dssp ECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCT
T ss_pred cCCCCCcHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCC
Confidence 999999999999764 389999999999999999999986 35689999999999999999999999995
No 9
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=99.97 E-value=4.1e-32 Score=254.60 Aligned_cols=142 Identities=24% Similarity=0.408 Sum_probs=123.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||+||+|+.. +|+.||||+++.... ......+.+|+++++.++|||||++++++.+.+..++||
T Consensus 13 g~Y~i~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivm 92 (275)
T 3hyh_A 13 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp -CCEEEEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred eCeEEEEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEE
Confidence 67999999999999999999964 699999999965432 223456999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+ +|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 93 Ey~-~g~L~~~l~~~~----~l~e~~~~~~~~qi~~al~ylH~~---~IiHRDiKP~NILl~~~~~vkl~DFG 157 (275)
T 3hyh_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp ECC-CEEHHHHHHHSC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTCCEEECCSS
T ss_pred eCC-CCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCChHHeEECCCCCEEEeecC
Confidence 999 689999998754 389999999999999999999999 99999999999999999999999995
No 10
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=99.97 E-value=4.9e-32 Score=267.92 Aligned_cols=141 Identities=25% Similarity=0.354 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.|+..+.||+|+||+||+|+.. +|+.||||++.... ......+.+|+.+|+.++|||||++++++.+.+..|+||||
T Consensus 151 ~~y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~-~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy 229 (423)
T 4fie_A 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRK-QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEF 229 (423)
T ss_dssp GTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTT-CSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HhcEeeeEeccCcCcEEEEEEECCCCCEEEEEEEeccc-hhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeC
Confidence 45888899999999999999965 69999999996543 23344689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++|+|.+++... .+++..+..|+.||++||+|||++ +||||||||+||||+.++.+||+||-
T Consensus 230 ~~gG~L~~~i~~~-----~l~e~~~~~~~~qil~aL~ylH~~---~IiHRDiKp~NILl~~~g~vKl~DFG 292 (423)
T 4fie_A 230 LEGGALTDIVTHT-----RMNEEQIAAVCLAVLQALSVLHAQ---GVIHRDIKSDSILLTHDGRVKLSDFG 292 (423)
T ss_dssp CTTEEHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSTTTEEECTTCCEEECCCT
T ss_pred CCCCcHHHHHhcc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEecCc
Confidence 9999999999754 289999999999999999999999 99999999999999999999999996
No 11
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=99.97 E-value=3.1e-32 Score=259.58 Aligned_cols=146 Identities=21% Similarity=0.319 Sum_probs=123.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-------- 365 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-------- 365 (447)
++|+..+.||+|+||+||+|+.. +|+.||||+++..........+.+|+++|+.++|||||++++++.+.+
T Consensus 5 ~dy~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~ 84 (299)
T 4g31_A 5 TDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPS 84 (299)
T ss_dssp HHEEEEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC--------
T ss_pred hhCEEeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCcccccccc
Confidence 45888899999999999999964 689999999965443334457999999999999999999999987544
Q ss_pred ----ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 366 ----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 366 ----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
..++|||||++|+|.+++..... ....++..+..|+.|+++||+|||++ +||||||||+|||++.++.+||+
T Consensus 85 ~~~~~l~ivmE~~~gg~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~al~ylH~~---~IiHRDlKp~NILl~~~~~vKl~ 160 (299)
T 4g31_A 85 SPKVYLYIQMQLCRKENLKDWMNGRCT-IEERERSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVG 160 (299)
T ss_dssp --CEEEEEEEECCCSCCHHHHHHTCCS-GGGSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCcEEEEEEecCCCCcHHHHHHhcCC-CChhHHHHHHHHHHHHHHHHHHHHHC---cCccccCcHHHeEECCCCcEEEc
Confidence 36899999999999999986532 22356677889999999999999999 99999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 161 DFG 163 (299)
T 4g31_A 161 DFG 163 (299)
T ss_dssp CCC
T ss_pred cCc
Confidence 995
No 12
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=99.97 E-value=6.8e-32 Score=255.26 Aligned_cols=142 Identities=25% Similarity=0.390 Sum_probs=121.7
Q ss_pred CCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec----CCceEEEe
Q 013258 298 SNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLVY 371 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv~ 371 (447)
...+.||+|+||+||+|+.. +++.||||.+...... .....|.+|+++++.++|||||++++++.+ .+..++||
T Consensus 29 ~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvm 108 (290)
T 3fpq_A 29 KFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVT 108 (290)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEE
T ss_pred EeeeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEE
Confidence 44567999999999999965 5899999999654322 234469999999999999999999999865 34579999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
|||++|+|.++++... .+++..+..++.||++||+|||++ .++||||||||+||||+. ++.+||+||-
T Consensus 109 Ey~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~ylH~~-~~~IiHRDlKp~NILl~~~~g~vKl~DFG 177 (290)
T 3fpq_A 109 ELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp ECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS-SSCCCCCCCCGGGEEESSTTSCEEECCTT
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC-CCCEEecccChhheeEECCCCCEEEEeCc
Confidence 9999999999998754 389999999999999999999998 234999999999999984 7899999995
No 13
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=99.97 E-value=4.3e-32 Score=261.12 Aligned_cols=137 Identities=24% Similarity=0.289 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.|...+.||+|+||+||+|+.+ +|+.||||+++.... ..+|+.+++.++|||||++++++.+.+..|+||||
T Consensus 58 ~~~~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~------~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy 131 (336)
T 4g3f_A 58 HWMTHQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF------RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMEL 131 (336)
T ss_dssp TEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC------CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred hheEeCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh------HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEec
Confidence 45667788999999999999964 699999999965321 24799999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
|++|+|.++++..+ .+++..+..|+.|++.||+|||++ +||||||||+||||+.++ .+||+||-
T Consensus 132 ~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~~vKl~DFG 196 (336)
T 4g3f_A 132 LEGGSLGQLIKQMG----CLPEDRALYYLGQALEGLEYLHTR---RILHGDVKADNVLLSSDGSRAALCDFG 196 (336)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCCGGGEEECTTSCCEEECCCT
T ss_pred cCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecccCHHHEEEeCCCCEEEEeeCC
Confidence 99999999998754 389999999999999999999999 999999999999999998 59999995
No 14
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=99.97 E-value=1.2e-32 Score=261.69 Aligned_cols=143 Identities=27% Similarity=0.317 Sum_probs=122.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|++.+.||+|+||+||+|+.. +++.||||+++.... .....++.+|++++++++|||||++++++.+++..++
T Consensus 24 ~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~i 103 (304)
T 3ubd_A 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYL 103 (304)
T ss_dssp GGEEEEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEE
T ss_pred cccEEEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEE
Confidence 46888999999999999999852 478999999965432 2223468899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||||++|+|.+++.... .+++..+..++.|++.||+|||++ +||||||||+|||+++++.+||+||-
T Consensus 104 vmEy~~gg~L~~~l~~~~----~l~e~~~~~~~~qi~~aL~ylH~~---~IiHRDlKp~NILl~~~g~vKl~DFG 171 (304)
T 3ubd_A 104 ILDFLRGGDLFTRLSKEV----MFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGHIKLTDFG 171 (304)
T ss_dssp EECCCTTCEEHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTSCEEEESSE
T ss_pred EEEcCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHeEEcCCCCEEecccc
Confidence 999999999999998754 389999999999999999999999 99999999999999999999999995
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=99.97 E-value=4.6e-32 Score=263.72 Aligned_cols=157 Identities=27% Similarity=0.380 Sum_probs=133.7
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccccHHHHHHHHHHHhcCCC-CCccce
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVH-RNLLRL 357 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H-~niv~l 357 (447)
++..+.++..++|++.+.||+|+||+||+|++.. ++.||||.++.........+|.+|+++|.+++| ||||++
T Consensus 54 ~~~~~wEi~~~~~~l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l 133 (353)
T 4ase_A 54 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 133 (353)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCcccEecHHHeEEeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3445556677889999999999999999998532 368999999765544445679999999999965 899999
Q ss_pred eeEEecC-CceEEEeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecC
Q 013258 358 YGFCTTV-TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRD 424 (447)
Q Consensus 358 ~~~~~~~-~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 424 (447)
+|+|.+. +..++|||||++|+|.++|+.... ....++|.++..++.|||+||+|||++ +|||||
T Consensus 134 ~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~---~iiHRD 210 (353)
T 4ase_A 134 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 210 (353)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEEecCCEEEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhC---CeecCc
Confidence 9999764 568999999999999999976421 123589999999999999999999999 999999
Q ss_pred CCCCceeeCCCCceeecccc
Q 013258 425 VKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 425 lkp~NILl~~~~~~~i~df~ 444 (447)
|||+|||+++++.+||+||-
T Consensus 211 LK~~NILl~~~~~vKi~DFG 230 (353)
T 4ase_A 211 LAARNILLSEKNVVKICDFG 230 (353)
T ss_dssp CSGGGEEECGGGCEEECCCG
T ss_pred cCccceeeCCCCCEEECcch
Confidence 99999999999999999995
No 16
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=99.96 E-value=9e-30 Score=246.11 Aligned_cols=175 Identities=81% Similarity=1.241 Sum_probs=149.2
Q ss_pred CCCCccccccCccccccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcC
Q 013258 270 PAEDDSELQLGQLKRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA 349 (447)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l 349 (447)
+...++....+..+.+++.++....++|+..+.||+|+||.||+|+..+++.||||+++..........+.+|+++++.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l 84 (326)
T 3uim_A 5 PAEEDPEVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMA 84 (326)
T ss_dssp ----------CCCEECCTHHHHTTTTSSCSTTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTC
T ss_pred CcccCcccccCccceecHHHHHHHhhccccceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhc
Confidence 34444455566778899999999999999999999999999999998789999999997655444444799999999999
Q ss_pred CCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 350 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 350 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
+||||+++++++...+..++||||+++|+|.+++.........++|..+..++.|++.||+|||+.+.++|+||||||+|
T Consensus 85 ~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~N 164 (326)
T 3uim_A 85 VHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAAN 164 (326)
T ss_dssp CCTTBCCCCEEECCSSCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGG
T ss_pred cCCCccceEEEEecCCceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhh
Confidence 99999999999999999999999999999999998876555669999999999999999999999877899999999999
Q ss_pred eeeCCCCceeecccc
Q 013258 430 ILLDEDADQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~~~~i~df~ 444 (447)
||+++++.+||+||-
T Consensus 165 il~~~~~~~kl~Dfg 179 (326)
T 3uim_A 165 ILLDEEFEAVVGDFG 179 (326)
T ss_dssp EEECTTCCEEECCCS
T ss_pred EEECCCCCEEeccCc
Confidence 999999999999995
No 17
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=99.96 E-value=1.1e-29 Score=251.09 Aligned_cols=142 Identities=23% Similarity=0.401 Sum_probs=124.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec------CCc
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT------VTE 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~ 366 (447)
++|++.+.||+|+||+||+|+.. +|+.||||+++..... .....+.+|+++|+.++|||||++++++.. .+.
T Consensus 54 ~~Y~~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~ 133 (398)
T 4b99_A 54 DEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKS 133 (398)
T ss_dssp SSEEEEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCC
T ss_pred CCeEEEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCE
Confidence 46888899999999999999964 6999999999654322 223468899999999999999999998764 357
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.|+|||||+ |+|.+++...+ .+++..+..++.|++.||+|||++ +||||||||+|||++.++.+||+||.
T Consensus 134 ~~ivmE~~~-g~L~~~i~~~~----~l~~~~~~~~~~qil~al~ylH~~---~iiHRDlKP~NIl~~~~~~~Ki~DFG 203 (398)
T 4b99_A 134 VYVVLDLME-SDLHQIIHSSQ----PLTLEHVRYFLYQLLRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFG 203 (398)
T ss_dssp EEEEEECCS-EEHHHHHTSSS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEeCCC-CCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCcCCCcCccccccCCCCCEEEeecc
Confidence 899999996 78999997653 489999999999999999999999 99999999999999999999999995
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=99.96 E-value=5.4e-29 Score=257.28 Aligned_cols=144 Identities=28% Similarity=0.370 Sum_probs=125.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHH---HHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQ---TEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~---~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|++.++||+|+||+||+|+.. +|+.||||+++.... ......+. .++.+++.++|||||++++++.+.+..
T Consensus 188 lddf~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~l 267 (689)
T 3v5w_A 188 MNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKL 267 (689)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEE
T ss_pred hHHeEEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEE
Confidence 367999999999999999999965 699999999964321 12222233 346677788999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|||||+||+|.++|.... .+++..+..|+.||+.||+|||++ +||||||||+|||||++|.+||+||-
T Consensus 268 ylVmEy~~GGdL~~~l~~~~----~l~E~~a~~y~~qIl~aL~yLH~~---gIiHRDLKPeNILld~~G~vKL~DFG 337 (689)
T 3v5w_A 268 SFILDLMNGGDLHYHLSQHG----VFSEADMRFYAAEIILGLEHMHNR---FVVYRDLKPANILLDEHGHVRISDLG 337 (689)
T ss_dssp EEEECCCCSCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred EEEEecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCchHHeEEeCCCCEEecccc
Confidence 99999999999999998754 389999999999999999999999 99999999999999999999999995
No 19
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=99.96 E-value=6.8e-29 Score=242.72 Aligned_cols=139 Identities=20% Similarity=0.345 Sum_probs=124.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
..+.|++.+.||+|+||+||+|+.+ +++.||||.+... ....++.+|++++..+ +|||||++++++.+.+..
T Consensus 19 l~~~Y~i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~---~~~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~ 95 (361)
T 4f9c_A 19 LSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPT---SHPIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHV 95 (361)
T ss_dssp GGGTCEEEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTT---SCHHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEE
T ss_pred ccCcEEEEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccc---cCHHHHHHHHHHHHHhcCCCCCceEEEEEEECCEE
Confidence 4578999999999999999999752 4678999998543 2345688999999988 699999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~ 444 (447)
++||||+++|+|.+++.. +++.++..++.|++.||+|||++ +||||||||+|||++.+ +.+||+||-
T Consensus 96 ~lvmE~~~g~~L~~~~~~-------l~~~~~~~~~~qll~al~ylH~~---gIiHRDiKPeNiLl~~~~~~~kl~DFG 163 (361)
T 4f9c_A 96 VIAMPYLEHESFLDILNS-------LSFQEVREYMLNLFKALKRIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFG 163 (361)
T ss_dssp EEEEECCCCCCHHHHHTT-------CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEEEeCCCcccHHHHHcC-------CCHHHHHHHHHHHHHHHHHHHHC---CeEeCcCCHHHeEEeCCCCeEEECcCC
Confidence 999999999999999842 78999999999999999999999 99999999999999987 799999995
No 20
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.95 E-value=5.8e-28 Score=250.04 Aligned_cols=143 Identities=20% Similarity=0.332 Sum_probs=127.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|++.+.||+|+||+||+|+.+ +|+.||+|+++... ......+.+|+.+|+.++|||||++++++.+.+..++||||
T Consensus 157 ~~Y~i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~-~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~ 235 (573)
T 3uto_A 157 DHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPH-ESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEF 235 (573)
T ss_dssp GTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred cccEEEEEEeeccCeEEEEEEECCCCCEEEEEEEeccc-hhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEee
Confidence 67889999999999999999964 69999999986532 22344688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC--Cceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED--ADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~--~~~~i~df~ 444 (447)
|++|+|.+++..... .+++..+..++.||++||+|||++ +|+||||||+|||++.+ +.+||+||-
T Consensus 236 ~~gg~L~~~i~~~~~---~l~e~~~~~~~~qi~~al~ylH~~---~iiHRDlKp~Nill~~~~~~~vKl~DFG 302 (573)
T 3uto_A 236 MSGGELFEKVADEHN---KMSEDEAVEYMRQVCKGLCHMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFG 302 (573)
T ss_dssp CCCCBHHHHHTCTTS---CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCS
T ss_pred cCCCcHHHHHHHhCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeeccCChhhccccCCCCCCEEEeecc
Confidence 999999999965432 489999999999999999999999 99999999999999865 799999995
No 21
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=99.94 E-value=1.7e-27 Score=229.64 Aligned_cols=152 Identities=43% Similarity=0.720 Sum_probs=135.8
Q ss_pred HHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 289 ELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 289 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++...+++|+..+.||+|+||.||+|+.++++.||||.+.... ......+.+|+++++.++||||+++++++...+..+
T Consensus 33 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 111 (321)
T 2qkw_B 33 DLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPES-SQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMI 111 (321)
T ss_dssp CCCCCCCCCSCCCCSCBCSSSEEEEEECTTCCEEEEEECCSCC-SSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCE
T ss_pred HHHHHHhccCccceeecCCCeeEEEEEECCCCEEEEEEecccC-hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence 3344668899999999999999999998889999999986543 234457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.+++.........++|..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 112 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 184 (321)
T 2qkw_B 112 LIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFG 184 (321)
T ss_dssp EEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCSTTEEECTTCCEEECCCT
T ss_pred EEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCC---CeecCCCCHHHEEECCCCCEEEeecc
Confidence 99999999999999976544444589999999999999999999999 99999999999999999999999995
No 22
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.94 E-value=5e-27 Score=228.76 Aligned_cols=144 Identities=21% Similarity=0.339 Sum_probs=129.2
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||+||+|+. .+|+.||||++...........+.+|+++++.++||||+++++++...+..++|||
T Consensus 9 ~~~y~i~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E 88 (347)
T 3zgw_A 9 LKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLE 88 (347)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hcCeEEEEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEe
Confidence 46788889999999999999996 46999999998655433344578999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++..... +++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 89 ~~~gg~L~~~l~~~~~----l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~kL~DFG 153 (347)
T 3zgw_A 89 YCPGGELFDYIISQDR----LSEEETRVVFRQIVSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFG 153 (347)
T ss_dssp CCTTCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred CCCCCCHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CeEeCCccHHHEEEcCCCCEEEEecc
Confidence 9999999999976543 89999999999999999999999 99999999999999999999999995
No 23
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=99.94 E-value=2.7e-27 Score=237.36 Aligned_cols=153 Identities=20% Similarity=0.281 Sum_probs=134.0
Q ss_pred cHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013258 286 SLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCT 362 (447)
Q Consensus 286 ~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 362 (447)
.+.+++...++|+..++||+|+||+||+|+.. +++.||||+++.... ......+.+|+.++..++||||+++++++.
T Consensus 65 ~~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~ 144 (437)
T 4aw2_A 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQ 144 (437)
T ss_dssp HHHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEE
T ss_pred hhhcccCChhheEEEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe
Confidence 34556667789999999999999999999976 488999999964321 112234889999999999999999999999
Q ss_pred cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 363 TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 363 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
+.+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +||||||||+|||+|.++.+||+|
T Consensus 145 ~~~~~~lV~Ey~~gg~L~~~l~~~~~---~l~e~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILl~~~g~vkL~D 218 (437)
T 4aw2_A 145 DDNNLYLVMDYYVGGDLLTLLSKFED---RLPEEMARFYLAEMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLAD 218 (437)
T ss_dssp CSSEEEEEECCCTTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECC
T ss_pred eCCEEEEEEecCCCCcHHHHHHHccC---CCCHHHHHHHHHHHHHHHHHHHhC---CeEecccCHHHeeEcCCCCEEEcc
Confidence 99999999999999999999986422 389999999999999999999999 999999999999999999999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 219 FG 220 (437)
T 4aw2_A 219 FG 220 (437)
T ss_dssp CT
T ss_pred hh
Confidence 96
No 24
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=99.94 E-value=6.6e-27 Score=230.46 Aligned_cols=145 Identities=31% Similarity=0.436 Sum_probs=128.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|++.+.||+|+||.||+|+.. ++..||||.++.........+|.+|+.+++.++||||+++++++...+..++
T Consensus 44 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 123 (373)
T 2qol_A 44 ATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMI 123 (373)
T ss_dssp GGGCCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEE
T ss_pred HhhceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEE
Confidence 357888999999999999999864 4678999999765433345579999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.++++... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 124 v~e~~~~~sL~~~l~~~~---~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 192 (373)
T 2qol_A 124 VTEYMENGSLDSFLRKHD---AQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFG 192 (373)
T ss_dssp EEECCTTCBHHHHHHTTT---TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred EEeCCCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEEcCCCCEEECcCc
Confidence 999999999999997643 2489999999999999999999999 99999999999999999999999995
No 25
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=99.94 E-value=9.2e-27 Score=229.22 Aligned_cols=148 Identities=28% Similarity=0.441 Sum_probs=129.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
.++|.+.+.||+|+||.||+|+.. ++..||||.++.........++.+|+++++.+ +||||+++++++...
T Consensus 80 ~~~~~~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 159 (370)
T 2psq_A 80 RDKLTLGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 159 (370)
T ss_dssp GGGEEEEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSS
T ss_pred HHHCEeeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccC
Confidence 356778899999999999999852 35679999997654333445799999999999 899999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccCC------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQS------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||+
T Consensus 160 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll 236 (370)
T 2psq_A 160 GPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVLV 236 (370)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEE
T ss_pred CCEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeccccchhhEEE
Confidence 999999999999999999987532 123478999999999999999999999 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.+||+||-
T Consensus 237 ~~~~~~kl~DFG 248 (370)
T 2psq_A 237 TENNVMKIADFG 248 (370)
T ss_dssp CTTCCEEECCCS
T ss_pred CCCCCEEEcccc
Confidence 999999999995
No 26
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=99.94 E-value=9.5e-27 Score=225.26 Aligned_cols=144 Identities=24% Similarity=0.390 Sum_probs=129.4
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||.||+|+. .+|+.||||++...... ....++.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 93 (328)
T 3fe3_A 14 IGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIM 93 (328)
T ss_dssp ETTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCCEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEE
Confidence 35788889999999999999996 57999999999654322 23446889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... +++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 94 e~~~~~~L~~~l~~~~~----l~~~~~~~~~~qi~~al~~lH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 159 (328)
T 3fe3_A 94 EYASGGEVFDYLVAHGR----MKEKEARSKFRQIVSAVQYCHQK---RIVHRDLKAENLLLDADMNIKIADFG 159 (328)
T ss_dssp CCCTTCBHHHHHHHHCC----CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSTT
T ss_pred ECCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CEeccCCCHHHEEEcCCCCEEEeecc
Confidence 99999999999977543 88999999999999999999999 99999999999999999999999995
No 27
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=99.94 E-value=9.4e-27 Score=225.08 Aligned_cols=144 Identities=29% Similarity=0.407 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|.+.+.||+|+||.||+|+.. .+..||||.++..........+.+|+.+++.++||||+++++++...+..++|
T Consensus 49 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 128 (325)
T 3kul_A 49 SRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIV 128 (325)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEE
T ss_pred hHeEEeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEE
Confidence 45777899999999999999974 34569999997654444455799999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.++++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 129 ~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 196 (325)
T 3kul_A 129 TEYMENGSLDTFLRTHDG---QFTIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSDFG 196 (325)
T ss_dssp EECCTTCBHHHHHHTTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred eeCCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCcceEEECCCCCEEECCCC
Confidence 999999999999976432 489999999999999999999999 99999999999999999999999995
No 28
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=99.94 E-value=1.4e-26 Score=223.84 Aligned_cols=147 Identities=21% Similarity=0.315 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------- 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------- 365 (447)
.++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+|+++++.++||||+++++++.+..
T Consensus 5 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 84 (332)
T 3qd2_B 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEE 84 (332)
T ss_dssp HHHEEEEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHH
T ss_pred hhcCceeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhh
Confidence 356888899999999999999976 699999999975544444567999999999999999999999986543
Q ss_pred --------------------------------------------------ceEEEeecCCCCChhhHhhccCCCCCCCCh
Q 013258 366 --------------------------------------------------EKLLVYPYMTNGSVASRLRERQSSLPPLDW 395 (447)
Q Consensus 366 --------------------------------------------------~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~ 395 (447)
..++||||+++|+|.+++..... ....++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~-~~~~~~ 163 (332)
T 3qd2_B 85 MDEIWLKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCS-LEDREH 163 (332)
T ss_dssp HHC--------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCS-GGGSCH
T ss_pred hhhhhhccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccC-ccchhh
Confidence 27999999999999999987532 233567
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 396 PTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 396 ~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 164 ~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 209 (332)
T 3qd2_B 164 GVCLHIFIQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFG 209 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHHHhC---CeeecCCCcccEEEeCCCCEEEeecC
Confidence 77899999999999999999 99999999999999999999999995
No 29
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=99.94 E-value=5.4e-27 Score=233.41 Aligned_cols=150 Identities=23% Similarity=0.314 Sum_probs=132.0
Q ss_pred HHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013258 287 LRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTT 363 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 363 (447)
+.+++...++|+..+.||+|+||+||+|+.. +++.||+|+++... .......+.+|+.++..++||||+++++++.+
T Consensus 61 ~~~~~~~~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~ 140 (410)
T 3v8s_A 61 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 140 (410)
T ss_dssp HHHHSCCGGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEEC
T ss_pred HHhcccCccccEEEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEE
Confidence 3445556788999999999999999999975 58999999986432 12223358899999999999999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
.+..++||||+++|+|.++++.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||
T Consensus 141 ~~~~~lV~E~~~gg~L~~~l~~~-----~~~e~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DF 212 (410)
T 3v8s_A 141 DRYLYMVMEYMPGGDLVNLMSNY-----DVPEKWARFYTAEVVLALDAIHSM---GFIHRDVKPDNMLLDKSGHLKLADF 212 (410)
T ss_dssp SSEEEEEECCCTTEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCC
T ss_pred CCEEEEEEeCCCCCcHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCCHHHeeECCCCCEEEecc
Confidence 99999999999999999999764 278999999999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 213 G 213 (410)
T 3v8s_A 213 G 213 (410)
T ss_dssp T
T ss_pred c
Confidence 5
No 30
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=99.94 E-value=1.6e-26 Score=224.41 Aligned_cols=143 Identities=24% Similarity=0.330 Sum_probs=128.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+|+.. +|+.||+|+++... .......+.+|+.++..++||||+++++++...+..++||
T Consensus 5 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~ 84 (337)
T 1o6l_A 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVM 84 (337)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEE
Confidence 56888899999999999999965 68999999996542 2234456889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 85 E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 150 (337)
T 1o6l_A 85 EYANGGELFFHLSRER----VFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFG 150 (337)
T ss_dssp ECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCCHHHEEECCCCCEEEeecc
Confidence 9999999999997653 388999999999999999999999 99999999999999999999999995
No 31
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=99.94 E-value=6.5e-27 Score=233.00 Aligned_cols=154 Identities=21% Similarity=0.272 Sum_probs=134.5
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEE
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFC 361 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~ 361 (447)
+.+++.....++|+..+.||+|+||+||+|+.+ +|+.||||+++.... ......+.+|..++..++||||+++++++
T Consensus 51 ~~~~~~~~~~~~f~~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~ 130 (412)
T 2vd5_A 51 VRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF 130 (412)
T ss_dssp HHHHHHSCCGGGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE
T ss_pred hhhhhccCChhhEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE
Confidence 345555666789999999999999999999975 699999999964321 11223488999999999999999999999
Q ss_pred ecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 362 TTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 362 ~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
.+.+..++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+|.++.+||+
T Consensus 131 ~~~~~~~lVmE~~~gg~L~~~l~~~~~---~l~~~~~~~~~~qi~~aL~~LH~~---giiHrDLKp~NILld~~g~vkL~ 204 (412)
T 2vd5_A 131 QDENYLYLVMEYYVGGDLLTLLSKFGE---RIPAEMARFYLAEIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLA 204 (412)
T ss_dssp ECSSEEEEEECCCCSCBHHHHHHHHSS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEEC
T ss_pred eeCCEEEEEEcCCCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeecccCHHHeeecCCCCEEEe
Confidence 999999999999999999999986532 388999999999999999999999 99999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 205 DFG 207 (412)
T 2vd5_A 205 DFG 207 (412)
T ss_dssp CCT
T ss_pred ech
Confidence 995
No 32
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=99.94 E-value=4.1e-26 Score=217.73 Aligned_cols=142 Identities=22% Similarity=0.350 Sum_probs=128.9
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||+||+|+. .+++.||||.+..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 97 (297)
T 3fxz_A 19 KKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQ-PKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVME 97 (297)
T ss_dssp GGTBCCCEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhceeeeeeeccCCCeEEEEEEECCCCcEEEEEEeecccc-cHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEE
Confidence 35799999999999999999995 4689999999865432 334568999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 98 ~~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 161 (297)
T 3fxz_A 98 YLAGGSLTDVVTET-----CMDEGQIAAVCRECLQALEFLHSN---QVIHRDIKSDNILLGMDGSVKLTDFG 161 (297)
T ss_dssp CCTTCBHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred CCCCCCHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEECCCCCEEEeeCC
Confidence 99999999999764 288999999999999999999999 99999999999999999999999995
No 33
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=99.94 E-value=6.1e-27 Score=231.12 Aligned_cols=145 Identities=30% Similarity=0.454 Sum_probs=129.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|...+.||+|+||.||+|+.. +++.||||.++.........+|.+|+++++.++||||+++++++...+..++|||
T Consensus 113 ~~~~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 192 (377)
T 3cbl_A 113 HEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVME 192 (377)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred hHHeEEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEE
Confidence 456777899999999999999976 6899999999754333333468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.++++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 193 ~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nil~~~~~~~kl~DfG 258 (377)
T 3cbl_A 193 LVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESK---CCIHRDLAARNCLVTEKNVLKISDFG 258 (377)
T ss_dssp CCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred cCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CcCCcccCHHHEEEcCCCcEEECcCC
Confidence 9999999999986432 378999999999999999999999 99999999999999999999999995
No 34
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=99.93 E-value=3e-26 Score=219.82 Aligned_cols=143 Identities=25% Similarity=0.440 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||+||+|+.. +++.||+|.+... .......+.+|++++..++||||+++++++.+.+..++||||
T Consensus 10 ~~~~~~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~-~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 88 (310)
T 3s95_A 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRF-DEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEY 88 (310)
T ss_dssp GGEEEEEEEECCSSEEEEEEEETTTCCEEEEEEESCC-CHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred hHeeccceecCCCCEEEEEEEECCCCcEEEEEEeccC-CHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEe
Confidence 46777899999999999999965 5899999988543 223345799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++..... .++|..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 89 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 153 (310)
T 3s95_A 89 IKGGTLRGIIKSMDS---QYPWSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFG 153 (310)
T ss_dssp CTTCBHHHHHHHCCT---TSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEECTTSCEEECCCT
T ss_pred cCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCcCeEEECCCCCEEEeecc
Confidence 999999999987432 389999999999999999999999 99999999999999999999999995
No 35
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=99.93 E-value=1.2e-26 Score=224.26 Aligned_cols=143 Identities=25% Similarity=0.379 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|++.+.||+|+||+||+|+.. +++.||||++...........+.+|+.+++.++||||+++++++...+..++||||
T Consensus 7 ~~y~i~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 86 (323)
T 3tki_A 7 EDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEY 86 (323)
T ss_dssp TCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred hhceeeeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEc
Confidence 57888899999999999999965 68999999986544333345689999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 87 ~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~Dfg 150 (323)
T 3tki_A 87 CSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (323)
T ss_dssp CTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred CCCCcHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccccchHHEEEeCCCCEEEEEee
Confidence 99999999987543 389999999999999999999999 99999999999999999999999995
No 36
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=99.93 E-value=1.2e-26 Score=225.65 Aligned_cols=152 Identities=30% Similarity=0.478 Sum_probs=132.7
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT 363 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 363 (447)
+....++|...+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~ 121 (343)
T 1luf_A 42 LEYPRNNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAV 121 (343)
T ss_dssp TBCCGGGCEEEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECS
T ss_pred eEecHHHCeeeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcc
Confidence 3445678999999999999999999864 3488999999765443345579999999999999999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCC--------------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeec
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSS--------------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHR 423 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~--------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHr 423 (447)
.+..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||++ +|+||
T Consensus 122 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~---~ivH~ 198 (343)
T 1luf_A 122 GKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVHR 198 (343)
T ss_dssp SSSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCS
T ss_pred CCceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhC---CeecC
Confidence 99999999999999999999874311 14589999999999999999999999 99999
Q ss_pred CCCCCceeeCCCCceeecccc
Q 013258 424 DVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 424 Dlkp~NILl~~~~~~~i~df~ 444 (447)
||||+|||+++++.+||+||-
T Consensus 199 Dlkp~NIl~~~~~~~kl~Dfg 219 (343)
T 1luf_A 199 DLATRNCLVGENMVVKIADFG 219 (343)
T ss_dssp CCSGGGEEECGGGCEEECCCS
T ss_pred CCCcceEEECCCCeEEEeecC
Confidence 999999999999999999995
No 37
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=99.93 E-value=1e-25 Score=215.70 Aligned_cols=159 Identities=42% Similarity=0.692 Sum_probs=140.2
Q ss_pred ccccccHHHHHHHhcCCCCC------CccccCCCceEEEEEeCCCcEEEEEEcccccc---cccHHHHHHHHHHHhcCCC
Q 013258 281 QLKRFSLRELQVATDGFSNK------NILGRGGFGKVYKGRLADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVH 351 (447)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~------~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H 351 (447)
....|++.++..++++|... +.||+|+||.||+|+. +++.||||.+..... ......+.+|+.+++.++|
T Consensus 11 ~~~~~~~~~l~~~~~~f~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h 89 (307)
T 2nru_A 11 RFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQH 89 (307)
T ss_dssp CCEECCHHHHHHHTTTTCCSBTTTTCCEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCC
T ss_pred CCCcccHHHHHHHHcccccccccccCCccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCC
Confidence 34568999999999999877 8999999999999997 588999999864321 2234569999999999999
Q ss_pred CCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 352 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 352 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
|||+++++++...+..++||||+++|+|.+++..... ...++|..+..++.|+++||+|||+. +|+||||||+||+
T Consensus 90 ~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil 165 (307)
T 2nru_A 90 ENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDG-TPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANIL 165 (307)
T ss_dssp TTBCCEEEEECSSSSCEEEEECCTTCBHHHHHHTGGG-CCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEE
T ss_pred CCeEEEEEEEecCCceEEEEEecCCCcHHHHHHhccC-CCCCCHHHHHHHHHHHHHHHHHHhcC---CeecCCCCHHHEE
Confidence 9999999999999999999999999999999975422 23589999999999999999999999 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
+++++.+||+||-
T Consensus 166 i~~~~~~kl~Dfg 178 (307)
T 2nru_A 166 LDEAFTAKISDFG 178 (307)
T ss_dssp ECTTCCEEECCCT
T ss_pred EcCCCcEEEeecc
Confidence 9999999999995
No 38
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=99.93 E-value=1.9e-26 Score=225.29 Aligned_cols=146 Identities=29% Similarity=0.419 Sum_probs=128.2
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCce
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~ 367 (447)
...++|+..+.||+|+||+||+|+.. +++.||||+++... .......+.+|.+++..+ +||||+++++++...+..
T Consensus 20 ~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~ 99 (353)
T 3txo_A 20 LGIDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRL 99 (353)
T ss_dssp ---CCEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEE
T ss_pred CchhheEEEEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEE
Confidence 34578999999999999999999965 58999999996532 122344688999999988 799999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... +++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 100 ~lv~E~~~gg~L~~~l~~~~~----~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NILl~~~g~ikL~DFG 169 (353)
T 3txo_A 100 FFVMEFVNGGDLMFHIQKSRR----FDEARARFYAAEIISALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFG 169 (353)
T ss_dssp EEEEECCCSCBHHHHHHHHSS----CCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEeCCCCCcHHHHHHHcCC----CCHHHHHHHHHHHHHHHHHHHHC---CCcccCCCHHHEEECCCCCEEEcccc
Confidence 999999999999999987543 89999999999999999999999 99999999999999999999999995
No 39
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=99.93 E-value=6.3e-26 Score=218.88 Aligned_cols=153 Identities=22% Similarity=0.292 Sum_probs=133.9
Q ss_pred ccccHHHHHHHhcC----------CCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCC
Q 013258 283 KRFSLRELQVATDG----------FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH 351 (447)
Q Consensus 283 ~~~~~~~~~~~~~~----------~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H 351 (447)
..++.+++..+++. |+..+.||+|+||.||+|+.. +|+.||||+++... ......+.+|+.+++.++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h 101 (321)
T 2c30_A 23 GVVTHEQFKAALRMVVDQGDPRLLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRK-QQRRELLFNEVVIMRDYQH 101 (321)
T ss_dssp --CCHHHHHHHHHTTSCSSCHHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT-CCSHHHHHHHHHHHTTCCC
T ss_pred CcCcHHHHHHHHhhccCCCCchhhhhccEEeccCCCeEEEEEEECCCCcEEEEEEEeccc-hhHHHHHHHHHHHHHhCCC
Confidence 34677777776654 555678999999999999976 69999999986543 3345578999999999999
Q ss_pred CCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 352 RNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 352 ~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
|||+++++++...+..++||||+++|+|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||
T Consensus 102 ~niv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIl 173 (321)
T 2c30_A 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQV-----RLNEEQIATVCEAVLQALAYLHAQ---GVIHRDIKSDSIL 173 (321)
T ss_dssp TTBCCEEEEEEETTEEEEEECCCCSCBHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEE
T ss_pred CCcceEEEEEEECCEEEEEEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEE
Confidence 99999999999999999999999999999998643 389999999999999999999999 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
++.++.+||+||-
T Consensus 174 l~~~~~~kl~Dfg 186 (321)
T 2c30_A 174 LTLDGRVKLSDFG 186 (321)
T ss_dssp ECTTCCEEECCCT
T ss_pred ECCCCcEEEeeee
Confidence 9999999999995
No 40
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=99.93 E-value=3.6e-26 Score=220.20 Aligned_cols=143 Identities=29% Similarity=0.422 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||+||+|+.. +|+.||+|+++... .......+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 6 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~ 85 (318)
T 1fot_A 6 QDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIM 85 (318)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEE
T ss_pred HHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEE
Confidence 56888899999999999999965 68999999996542 1223456889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 86 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~Dfg 151 (318)
T 1fot_A 86 DYIEGGELFSLLRKSQ----RFPNPVAKFYAAEVCLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFG 151 (318)
T ss_dssp CCCCSCBHHHHHHHTS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred eCCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChheEEEcCCCCEEEeecC
Confidence 9999999999998653 388999999999999999999999 99999999999999999999999995
No 41
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.93 E-value=4.4e-26 Score=214.07 Aligned_cols=142 Identities=27% Similarity=0.437 Sum_probs=128.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|+..+.||+|+||.||+|+..+++.||+|+++... ....++.+|++++.+++||||+++++++.+.+..++||||+
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 87 (269)
T 4hcu_A 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGA--MSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFM 87 (269)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred hhceeeheecCCCccEEEEEEecCCCeEEEEEecccc--cCHHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeC
Confidence 5677789999999999999998888999999997543 23457999999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||-
T Consensus 88 ~~~~L~~~l~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 151 (269)
T 4hcu_A 88 EHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFG 151 (269)
T ss_dssp TTCBHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECGGGCEEECCTT
T ss_pred CCCcHHHHHHhcCc---ccCHHHHHHHHHHHHHHHHHHHhC---CeecCCcchheEEEcCCCCEEecccc
Confidence 99999999976432 488999999999999999999999 99999999999999999999999995
No 42
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=99.93 E-value=3e-26 Score=225.36 Aligned_cols=147 Identities=31% Similarity=0.411 Sum_probs=128.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|...+.||+|+||+||+|++. +++.||||+++.........++.+|+.+++.++||||+++++++......+
T Consensus 71 ~~~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 150 (367)
T 3l9p_A 71 KNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRF 150 (367)
T ss_dssp GGEEEEEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCE
T ss_pred hHeEEeeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCE
Confidence 56777899999999999999843 467899999976544444557999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCC---CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecc
Q 013258 369 LVYPYMTNGSVASRLRERQS---SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKT 442 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~---~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~d 442 (447)
+||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||++.++ .+||+|
T Consensus 151 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kL~D 227 (367)
T 3l9p_A 151 ILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGD 227 (367)
T ss_dssp EEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred EEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEEecCCCCceEEECC
Confidence 99999999999999987532 223488999999999999999999999 999999999999999655 499999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 228 FG 229 (367)
T 3l9p_A 228 FG 229 (367)
T ss_dssp CH
T ss_pred Cc
Confidence 94
No 43
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=99.93 E-value=3.6e-26 Score=225.50 Aligned_cols=143 Identities=25% Similarity=0.349 Sum_probs=128.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+++.. +++.||+|.++... .......+.+|+.++..++|||||++++++.+.+..++||
T Consensus 15 ~~y~i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~ 94 (384)
T 4fr4_A 15 DHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVV 94 (384)
T ss_dssp GGEEEEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEE
Confidence 56888899999999999999965 58999999986432 2233457889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+.+|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 95 e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 160 (384)
T 4fr4_A 95 DLLLGGDLRYHLQQNV----HFKEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFN 160 (384)
T ss_dssp CCCTTEEHHHHHHTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCcHHHeEECCCCCEEEeccc
Confidence 9999999999997643 389999999999999999999999 99999999999999999999999995
No 44
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=99.93 E-value=3.2e-26 Score=222.96 Aligned_cols=147 Identities=25% Similarity=0.410 Sum_probs=128.7
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCc
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 366 (447)
....++|...+.||+|+||+||+|+.+ +++.||||+++... .......+..|..++..+ +||||+++++++.+.+.
T Consensus 13 ~~~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~ 92 (345)
T 1xjd_A 13 KLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN 92 (345)
T ss_dssp ---CTTEEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSE
T ss_pred CCChHHeEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCE
Confidence 345678999999999999999999975 58999999996542 123344678899998876 99999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||.
T Consensus 93 ~~lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~vkL~DFG 163 (345)
T 1xjd_A 93 LFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFG 163 (345)
T ss_dssp EEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEEEeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCChhhEEECCCCCEEEeECh
Confidence 999999999999999998753 389999999999999999999999 99999999999999999999999995
No 45
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=99.93 E-value=3.8e-26 Score=226.18 Aligned_cols=144 Identities=26% Similarity=0.349 Sum_probs=127.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~l 369 (447)
.++|+..+.||+|+||+||+|+.+ +++.||||+++..... .....+.+|..++..+ +||||+++++++.+.+..++
T Consensus 51 ~~~y~~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~l 130 (396)
T 4dc2_A 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130 (396)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred hhHcEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEE
Confidence 457888999999999999999965 5889999999754322 1223578899998876 89999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|..++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 131 V~E~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---givHrDLKp~NILl~~~g~ikL~DFG 198 (396)
T 4dc2_A 131 VIEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 198 (396)
T ss_dssp EEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEcCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEECCCCCEEEeecc
Confidence 999999999999998754 389999999999999999999999 99999999999999999999999995
No 46
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=99.93 E-value=5.7e-26 Score=216.39 Aligned_cols=143 Identities=22% Similarity=0.296 Sum_probs=128.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||+|.+....... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 90 (294)
T 4eqm_A 11 ERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVM 90 (294)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEE
Confidence 56888899999999999999964 68999999985432222 2346899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 91 e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 156 (294)
T 4eqm_A 91 EYIEGPTLSEYIESHG----PLSVDTAINFTNQILDGIKHAHDM---RIVHRDIKPQNILIDSNKTLKIFDFG 156 (294)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCS
T ss_pred eCCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCCEEEEeCC
Confidence 9999999999998754 389999999999999999999999 99999999999999999999999995
No 47
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=99.93 E-value=7.6e-26 Score=221.67 Aligned_cols=144 Identities=24% Similarity=0.327 Sum_probs=128.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.+.|++.+.||+|+||.||+|+.. +|+.||+|.++...... ....+.+|+.++..++||||+++++++.+.+..
T Consensus 11 ~~~y~~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~ 90 (361)
T 2yab_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDV 90 (361)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEE
T ss_pred hhceEEeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEE
Confidence 457888899999999999999965 58999999996543221 245789999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC----ceeeccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 443 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~~i~df 443 (447)
++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+||
T Consensus 91 ~lv~e~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~~~vkl~DF 163 (361)
T 2yab_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (361)
T ss_dssp EEEEECCCSCBHHHHHTTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEeCCCCCccCEEEEec
Confidence 99999999999999997643 389999999999999999999999 999999999999999887 7999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 164 G 164 (361)
T 2yab_A 164 G 164 (361)
T ss_dssp S
T ss_pred C
Confidence 5
No 48
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=99.93 E-value=8.4e-26 Score=217.56 Aligned_cols=147 Identities=27% Similarity=0.437 Sum_probs=115.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||.||+|+.. +++.||+|.++..........+.+|+++++.++||||+++++++...+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 83 (317)
T 2pmi_A 4 SSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFE 83 (317)
T ss_dssp ---------------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEE
T ss_pred ccceeEeeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEE
Confidence 457888999999999999999864 5899999999755444444578999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccC--CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++ |+|.+++.... .....+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||.
T Consensus 84 ~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 153 (317)
T 2pmi_A 84 FMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFG 153 (317)
T ss_dssp CCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCS
T ss_pred ecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCChHHeEEcCCCCEEECcCc
Confidence 998 69999887642 1123488999999999999999999999 99999999999999999999999995
No 49
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=99.93 E-value=6.1e-26 Score=221.56 Aligned_cols=143 Identities=24% Similarity=0.310 Sum_probs=128.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|+.. +|+.||||+++... .......+.+|+.++..++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 120 (350)
T 1rdq_E 41 DQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVM 120 (350)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHCEEEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEE
Confidence 56788899999999999999965 68999999986432 2233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 121 e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFg 186 (350)
T 1rdq_E 121 EYVAGGEMFSHLRRIG----RFSEPHARFYAAQIVLTFEYLHSL---DLIYRDLKPENLLIDQQGYIQVTDFG 186 (350)
T ss_dssp ECCTTCBHHHHHHHHC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCccceEEECCCCCEEEcccc
Confidence 9999999999998753 388999999999999999999999 99999999999999999999999995
No 50
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=99.93 E-value=7.8e-26 Score=213.87 Aligned_cols=143 Identities=27% Similarity=0.420 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|...++..||||+++... ....++.+|++++..++||||+++++++...+..++||||
T Consensus 23 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 100 (283)
T 3gen_A 23 PKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS--MSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEY 100 (283)
T ss_dssp GGGEEEEEECC---CEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECC
T ss_pred HHHHHhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCC--CCHHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEec
Confidence 45677789999999999999999888899999997543 2345799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+||++++++.+||+||-
T Consensus 101 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 165 (283)
T 3gen_A 101 MANGCLLNYLREMRH---RFQTQQLLEMCKDVCEAMEYLESK---QFLHRDLAARNCLVNDQGVVKVSDFG 165 (283)
T ss_dssp CTTCBHHHHHHCGGG---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTSCEEECSTT
T ss_pred cCCCcHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCccceEEEcCCCCEEEcccc
Confidence 999999999976432 389999999999999999999999 99999999999999999999999995
No 51
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=99.93 E-value=6.8e-26 Score=212.55 Aligned_cols=143 Identities=28% Similarity=0.424 Sum_probs=129.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|+..++..||||.++... ....++.+|++++..++||||+++++++...+..++||||
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (268)
T 3sxs_A 7 REEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGS--MSEDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEY 84 (268)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECBTT--BCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred hhheeeeeeeccCCCceEEEEEecCceeEEEEEeccCC--CcHHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEc
Confidence 45678889999999999999998888899999997543 2345799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.++|+||-
T Consensus 85 ~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg 149 (268)
T 3sxs_A 85 ISNGCLLNYLRSHGK---GLEPSQLLEMCYDVCEGMAFLESH---QFIHRDLAARNCLVDRDLCVKVSDFG 149 (268)
T ss_dssp CTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCSGGGEEECTTCCEEECCTT
T ss_pred cCCCcHHHHHHHcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCcCcceEEECCCCCEEEccCc
Confidence 999999999977532 388999999999999999999999 99999999999999999999999995
No 52
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=99.93 E-value=7e-26 Score=220.73 Aligned_cols=143 Identities=27% Similarity=0.357 Sum_probs=127.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
++|+..+.||+|+||+||+|+.. +++.||+|+++...... ....+.+|..++..+ +||||+++++++...+..++|
T Consensus 9 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv 88 (345)
T 3a8x_A 9 QDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFV 88 (345)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEE
Confidence 46788899999999999999975 58999999997543222 233578899999887 899999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 89 ~e~~~gg~L~~~l~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~g~~kL~DFG 155 (345)
T 3a8x_A 89 IEYVNGGDLMFHMQRQR----KLPEEHARFYSAEISLALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYG 155 (345)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCGG
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEEecc
Confidence 99999999999998653 389999999999999999999999 99999999999999999999999995
No 53
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=99.93 E-value=1.4e-26 Score=226.61 Aligned_cols=157 Identities=28% Similarity=0.396 Sum_probs=133.9
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccce
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRL 357 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l 357 (447)
+...+.....++|++.+.||+|+||.||+|++ .+++.||||+++..........+.+|++++..+ +||||+++
T Consensus 12 ~~~~~~~~~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~ 91 (359)
T 3vhe_A 12 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 91 (359)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCcccccccccceeeceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeee
Confidence 44555666778899999999999999999973 246899999997654444445799999999999 79999999
Q ss_pred eeEEecCCc-eEEEeecCCCCChhhHhhccCCC-----------------------------------------------
Q 013258 358 YGFCTTVTE-KLLVYPYMTNGSVASRLRERQSS----------------------------------------------- 389 (447)
Q Consensus 358 ~~~~~~~~~-~~lv~e~~~~gsL~~~l~~~~~~----------------------------------------------- 389 (447)
++++...+. .++||||+++|+|.++++.....
T Consensus 92 ~~~~~~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (359)
T 3vhe_A 92 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEK 171 (359)
T ss_dssp EEEECSTTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC------------------------------------------
T ss_pred eeeeecCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCcccccccccccccc
Confidence 999987654 89999999999999999875321
Q ss_pred ---------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 390 ---------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 390 ---------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
...+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 172 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg 238 (359)
T 3vhe_A 172 SLSDVEEEEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFG 238 (359)
T ss_dssp ------------CTTTTCBCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCG
T ss_pred ccchhhhcccccchhccccCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChhhEEEcCCCcEEEEecc
Confidence 11288999999999999999999999 99999999999999999999999995
No 54
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=99.93 E-value=7.4e-26 Score=217.37 Aligned_cols=144 Identities=24% Similarity=0.393 Sum_probs=125.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||+||+|+..+++.||+|+++...... ....+.+|+++++.++||||+++++++...+..++|||
T Consensus 20 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 99 (311)
T 3niz_A 20 MEKYQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFE 99 (311)
T ss_dssp SCEEEEEEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEE
T ss_pred HhhhHhhhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEc
Confidence 35688889999999999999998889999999996543322 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|++ |+|.+.+..... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 100 ~~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 164 (311)
T 3niz_A 100 FME-KDLKKVLDENKT---GLQDSQIKIYLYQLLRGVAHCHQH---RILHRDLKPQNLLINSDGALKLADFG 164 (311)
T ss_dssp CCS-EEHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred CCC-CCHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCchHhEEECCCCCEEEccCc
Confidence 998 488888876432 388999999999999999999999 99999999999999999999999995
No 55
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=99.93 E-value=5.1e-26 Score=220.10 Aligned_cols=144 Identities=25% Similarity=0.333 Sum_probs=123.0
Q ss_pred hcCCCCCCccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
.++|+..+.||+|+||.||+++. .+++.||+|+++.... ......+.+|+.+++.++||||+++++++...+.
T Consensus 16 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~ 95 (327)
T 3a62_A 16 PECFELLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGK 95 (327)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSC
T ss_pred HHHeEEEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCE
Confidence 35688889999999999999986 4689999999975431 1223457899999999999999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||.
T Consensus 96 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~Nill~~~~~~kl~Dfg 166 (327)
T 3a62_A 96 LYLILEYLSGGELFMQLEREG----IFMEDTACFYLAEISMALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFG 166 (327)
T ss_dssp EEEEEECCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCTTTEEECTTSCEEECCCS
T ss_pred EEEEEeCCCCCcHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHhC---CEEcccCCHHHeEECCCCcEEEEeCC
Confidence 999999999999999997653 378899999999999999999999 99999999999999999999999995
No 56
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=99.93 E-value=4.2e-26 Score=222.91 Aligned_cols=148 Identities=20% Similarity=0.261 Sum_probs=127.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc----ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER----TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
.+.|++.+.||+|+||.||+|+.. +++.||||+++... .......+.+|+.++..++||||+++++++...+..+
T Consensus 23 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~ 102 (351)
T 3c0i_A 23 EDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLY 102 (351)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEE
T ss_pred ccceEEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 356888899999999999999864 68999999985432 1123457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~df~ 444 (447)
+||||+++|+|.+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++.+++ +||+||-
T Consensus 103 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg 178 (351)
T 3c0i_A 103 MVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFG 178 (351)
T ss_dssp EEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECSSSTTCCEEECCCT
T ss_pred EEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChHHeEEecCCCCCcEEEecCc
Confidence 99999999999988876433333488999999999999999999999 9999999999999987765 9999995
No 57
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.93 E-value=1.1e-25 Score=216.39 Aligned_cols=174 Identities=33% Similarity=0.610 Sum_probs=156.6
Q ss_pred cCchHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCc--cceeEeCCC---CCEEEEEcCCCCccc--cccccccCCCCCC
Q 013258 22 ISANAEVDALYIFKSKLQDPNNSLQSWDNLPGNLCT--WFHITCNPE---GSVTRVDLGNAALSG--ELAPELGQLKNLE 94 (447)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c~--w~gv~c~~~---~~v~~l~L~~~~l~g--~~~~~l~~l~~L~ 94 (447)
.|.+.|..||+.||+++.+|. .+.+|.. +.+||. |.||.|+.. ++|+.|+|++|.+.| .+|+.+.++++|+
T Consensus 2 ~c~~~~~~aL~~~k~~~~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~~~~~l~~L~L~~~~l~~~~~~~~~l~~l~~L~ 79 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDLGNPT-TLSSWLP-TTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPYPIPSSLANLPYLN 79 (313)
T ss_dssp CSCHHHHHHHHHHHHHTTCCG-GGTTCCT-TSCTTTTCSTTEEECCSSSCCCEEEEEEECCCCSSCEECCGGGGGCTTCS
T ss_pred CCCHHHHHHHHHHHHhcCCcc-cccCCCC-CCCCCcCCCcceEeCCCCCCceEEEEECCCCCccCCcccChhHhCCCCCC
Confidence 477889999999999998886 7899975 468998 999999854 799999999999999 9999999999999
Q ss_pred EEECCC-CccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccc
Q 013258 95 LLELYG-NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNN 173 (447)
Q Consensus 95 ~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N 173 (447)
+|+|++ |.+.+.+|..|+++++|++|+|++|++++.+|..+.++++|++|+|++|.+++.+|..+..+++|+.|++++|
T Consensus 80 ~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N 159 (313)
T 1ogq_A 80 FLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGN 159 (313)
T ss_dssp EEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSS
T ss_pred eeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCC
Confidence 999995 9999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCC-CCCC-ccccccccccc
Q 013258 174 RLSGPVPDN-GSFS-QFTPISFENNL 197 (447)
Q Consensus 174 ~l~g~~p~~-~~~~-~~~~~~~~~n~ 197 (447)
.++|.+|.. +.+. .++.+.+.+|.
T Consensus 160 ~l~~~~p~~l~~l~~~L~~L~L~~N~ 185 (313)
T 1ogq_A 160 RISGAIPDSYGSFSKLFTSMTISRNR 185 (313)
T ss_dssp CCEEECCGGGGCCCTTCCEEECCSSE
T ss_pred cccCcCCHHHhhhhhcCcEEECcCCe
Confidence 999988864 2333 55556666654
No 58
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=99.93 E-value=5.4e-26 Score=218.07 Aligned_cols=148 Identities=30% Similarity=0.434 Sum_probs=129.3
Q ss_pred hcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|.+.+.||+|+||.||+|+. .+++.||||.++..........+.+|+++++.++||||+++++++...+..
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~ 101 (314)
T 2ivs_A 22 RKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPL 101 (314)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSC
T ss_pred hhheeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCce
Confidence 45677889999999999999985 235789999997654434445789999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCC--------------------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCC
Q 013258 368 LLVYPYMTNGSVASRLRERQS--------------------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKA 427 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~--------------------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp 427 (447)
++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dikp 178 (314)
T 2ivs_A 102 LLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAA 178 (314)
T ss_dssp EEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHT---TEECCCCSG
T ss_pred EEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHC---CCcccccch
Confidence 999999999999999987532 112378899999999999999999999 999999999
Q ss_pred CceeeCCCCceeecccc
Q 013258 428 ANILLDEDADQSSKTIL 444 (447)
Q Consensus 428 ~NILl~~~~~~~i~df~ 444 (447)
+|||+++++.+||+||-
T Consensus 179 ~NIli~~~~~~kl~Dfg 195 (314)
T 2ivs_A 179 RNILVAEGRKMKISDFG 195 (314)
T ss_dssp GGEEEETTTEEEECCCT
T ss_pred heEEEcCCCCEEEcccc
Confidence 99999999999999995
No 59
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=99.93 E-value=1.2e-25 Score=222.84 Aligned_cols=146 Identities=22% Similarity=0.294 Sum_probs=129.4
Q ss_pred hcCCCCCCccccC--CCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRG--GFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G--~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|++.+.||+| +||.||+|+.. +++.||||+++...... ....+.+|+.+++.++|||||++++++...+..++
T Consensus 24 ~~~y~~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 103 (389)
T 3gni_B 24 GGCYELLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWV 103 (389)
T ss_dssp GGGEEEEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEE
T ss_pred CCcEEEEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEE
Confidence 3567888999999 99999999975 69999999996543322 23468889999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 104 v~e~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~kl~dfg 173 (389)
T 3gni_B 104 VTSFMAYGSAKDLICTHFM--DGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLR 173 (389)
T ss_dssp EEECCTTCBHHHHHHHTCT--TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCGG
T ss_pred EEEccCCCCHHHHHhhhcc--cCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEcccc
Confidence 9999999999999987532 2389999999999999999999999 99999999999999999999999994
No 60
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=99.93 E-value=1.4e-25 Score=216.42 Aligned_cols=143 Identities=21% Similarity=0.312 Sum_probs=127.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|.+.+.||+|+||.||+|+.. +++.||+|.++... .....+.+|+.++..++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~--~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 81 (321)
T 1tki_A 4 YEKYMIAEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKG--TDQVLVKKEISILNIARHRNILHLHESFESMEELVMIFE 81 (321)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCT--HHHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEEC
T ss_pred hhceEeeeEEecCCCeEEEEEEECCCCcEEEEEEEecCc--ccHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEE
Confidence 357888899999999999999965 58899999986432 234468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC--CCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~~i~df~ 444 (447)
|+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++. ++.+||+||-
T Consensus 82 ~~~g~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---givH~Dlkp~NIl~~~~~~~~~kl~Dfg 149 (321)
T 1tki_A 82 FISGLDIFERINTSA---FELNEREIVSYVHQVCEALQFLHSH---NIGHFDIRPENIIYQTRRSSTIKIIEFG 149 (321)
T ss_dssp CCCCCBHHHHHTSSS---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSCCCEEECCCT
T ss_pred eCCCCCHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEccCCCCCEEEEECC
Confidence 999999999997643 2488999999999999999999999 9999999999999997 7899999995
No 61
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=99.93 E-value=9.9e-26 Score=213.94 Aligned_cols=143 Identities=24% Similarity=0.438 Sum_probs=126.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||+|+..+++.||+|+++..... .....+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (288)
T 1ob3_A 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEH 81 (288)
T ss_dssp CSEEEEEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred ccchhhhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEe
Confidence 467788999999999999999878999999998654322 2235688999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++ +|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||.
T Consensus 82 ~~~-~l~~~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 145 (288)
T 1ob3_A 82 LDQ-DLKKLLDVCEG---GLESVTAKSFLLQLLNGIAYCHDR---RVLHRDLKPQNLLINREGELKIADFG 145 (288)
T ss_dssp CSE-EHHHHHHTSTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCTT
T ss_pred cCC-CHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEeECc
Confidence 985 99998876432 388999999999999999999999 99999999999999999999999995
No 62
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=99.93 E-value=8.3e-26 Score=223.38 Aligned_cols=148 Identities=29% Similarity=0.410 Sum_probs=129.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
.++|.+.+.||+|+||.||+|+.. ++..||||+++.........++.+|+++++.+ +||||+++++++...
T Consensus 68 ~~~y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~ 147 (382)
T 3tt0_A 68 RDRLVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 147 (382)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred hhheEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccC
Confidence 356777899999999999999852 23579999997654444445799999999999 999999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccCCC------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+|||+
T Consensus 148 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll 224 (382)
T 3tt0_A 148 GPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAARNVLV 224 (382)
T ss_dssp SSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEE
T ss_pred CceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCcceEEE
Confidence 9999999999999999999875421 23489999999999999999999999 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.+||+||-
T Consensus 225 ~~~~~~kL~DFG 236 (382)
T 3tt0_A 225 TEDNVMKIADFG 236 (382)
T ss_dssp CTTCCEEECSCS
T ss_pred cCCCcEEEcccC
Confidence 999999999995
No 63
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=99.93 E-value=7.9e-26 Score=220.88 Aligned_cols=145 Identities=24% Similarity=0.316 Sum_probs=128.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC-CcEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 368 (447)
..++|+..+.||+|+||+||+|+... ++.||||+++... .......+..|..++..+ +||||+++++++...+..+
T Consensus 18 ~~~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~ 97 (353)
T 2i0e_A 18 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 97 (353)
T ss_dssp -CTTEEEEEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEE
T ss_pred chHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEE
Confidence 45678889999999999999999764 8899999996542 223345688999999887 8999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 98 lv~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~vkL~DFG 166 (353)
T 2i0e_A 98 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 166 (353)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTSCEEECCCT
T ss_pred EEEeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CEEeccCCHHHEEEcCCCcEEEEeCC
Confidence 9999999999999998653 389999999999999999999999 99999999999999999999999995
No 64
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=99.93 E-value=8.9e-26 Score=213.96 Aligned_cols=147 Identities=20% Similarity=0.310 Sum_probs=129.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||+|+.. ++..+|+|.+...........+.+|+++++.++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~ 101 (285)
T 3is5_A 22 DLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMET 101 (285)
T ss_dssp HHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECC
T ss_pred hheeecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEe
Confidence 46788899999999999999964 58999999997665555566899999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
+++|+|.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+||-
T Consensus 102 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dikp~NIl~~~~~~~~~~kl~Dfg 172 (285)
T 3is5_A 102 CEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFG 172 (285)
T ss_dssp CSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEESSSSTTCCEEECCCC
T ss_pred CCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhC---CEEECCCCHHHEEEecCCCCCCEEEEeee
Confidence 999999999865422223489999999999999999999999 99999999999999 456789999995
No 65
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=99.93 E-value=6.3e-26 Score=217.67 Aligned_cols=149 Identities=28% Similarity=0.404 Sum_probs=129.7
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
....++|++.+.||+|+||.||+|+. +++.||||++...... ....++.+|++++++++||||+++++++...+..++
T Consensus 33 ~i~~~~y~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l 111 (309)
T 3p86_A 33 DIPWCDLNIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSI 111 (309)
T ss_dssp BCCGGGEEEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEE
T ss_pred cCChhHceeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEE
Confidence 34456788889999999999999987 5889999998654322 223468999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC--eeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++..... ...+++..+..++.|+++||+|||+. + |+||||||+|||+++++.+||+||-
T Consensus 112 v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~---~~~ivH~Dikp~NIll~~~~~~kL~Dfg 184 (309)
T 3p86_A 112 VTEYLSRGSLYRLLHKSGA-REQLDERRRLSMAYDVAKGMNYLHNR---NPPIVHRNLKSPNLLVDKKYTVKVCDFG 184 (309)
T ss_dssp EEECCTTCBHHHHHHSTTH-HHHSCHHHHHHHHHHHHHHHHHHHTS---SSCCCCTTCCGGGEEECTTCCEEECCCC
T ss_pred EEecCCCCcHHHHHhhcCC-CCCCCHHHHHHHHHHHHHHHHHHHcC---CCCEECCCCChhhEEEeCCCcEEECCCC
Confidence 9999999999999976421 12378999999999999999999998 7 9999999999999999999999995
No 66
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=99.93 E-value=1.2e-25 Score=213.30 Aligned_cols=140 Identities=10% Similarity=-0.024 Sum_probs=123.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||||.++...... ....+.+|+..+..++||||+++++++...+..++||
T Consensus 31 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 110 (286)
T 3uqc_A 31 GRYRLLIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVA 110 (286)
T ss_dssp TTEEEEEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred CcEEEEEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEE
Confidence 56888899999999999999975 48999999997654322 2356899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
||+++++|.++++.. ....++..++.|++.||+|||++ +|+||||||+|||+++++.+||+++
T Consensus 111 e~~~g~~L~~~l~~~------~~~~~~~~i~~ql~~aL~~lH~~---givH~Dikp~NIll~~~g~~kl~~~ 173 (286)
T 3uqc_A 111 EWIRGGSLQEVADTS------PSPVGAIRAMQSLAAAADAAHRA---GVALSIDHPSRVRVSIDGDVVLAYP 173 (286)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEETTSCEEECSC
T ss_pred EecCCCCHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHC---CCccCCCCcccEEEcCCCCEEEEec
Confidence 999999999998542 34557889999999999999999 9999999999999999999999865
No 67
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=99.93 E-value=1.4e-25 Score=216.00 Aligned_cols=146 Identities=23% Similarity=0.316 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--ceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+.. +++.||||+++..........+.+|+++++.++||||+++++++...+ ..++||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (319)
T 4euu_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (319)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CCEEEEEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEE
Confidence 45778899999999999999975 489999999976554445567899999999999999999999988755 679999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee----CCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... ...+++..+..++.|+++||+|||+. +|+||||||+|||+ +.++.+||+||-
T Consensus 89 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg 161 (319)
T 4euu_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFG 161 (319)
T ss_dssp ECCTTCBHHHHHHSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEECTTSCEEEEECCCT
T ss_pred eCCCCCCHHHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEEeccCCCCceEEEccCC
Confidence 99999999999987532 22389999999999999999999999 99999999999999 888889999995
No 68
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=99.93 E-value=1e-25 Score=230.16 Aligned_cols=144 Identities=28% Similarity=0.402 Sum_probs=129.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|...+.||+|+||.||+|++.. +..||||.++... ....+|.+|+.++++++||||++++++|...+..++|||
T Consensus 219 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E 296 (495)
T 1opk_A 219 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITE 296 (495)
T ss_dssp GGGEEEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred HHHceeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCcc--cchHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEE
Confidence 4557778999999999999999764 8899999997543 235679999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.++++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 297 ~~~~g~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 363 (495)
T 1opk_A 297 FMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRNLAARNCLVGENHLVKVADFG 363 (495)
T ss_dssp CCTTCBHHHHHHHSCT--TTSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCEEECCTT
T ss_pred ccCCCCHHHHHHhcCc--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCChhhEEECCCCcEEEeecc
Confidence 9999999999986432 2488999999999999999999999 99999999999999999999999995
No 69
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=99.92 E-value=1.9e-25 Score=216.07 Aligned_cols=143 Identities=26% Similarity=0.322 Sum_probs=127.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
+.|...+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|+.++..++||||+++++++...+..+
T Consensus 11 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~ 90 (326)
T 2y0a_A 11 DYYDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVI 90 (326)
T ss_dssp HHEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred cceEeceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEE
Confidence 45788899999999999999965 5899999998654321 13457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC----ceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~~i~df~ 444 (447)
+||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++ .+||+||-
T Consensus 91 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg 163 (326)
T 2y0a_A 91 LILELVAGGELFDFLAEKE----SLTEEEATEFLKQILNGVYYLHSL---QIAHFDLKPENIMLLDRNVPKPRIKIIDFG 163 (326)
T ss_dssp EEEECCCSCBHHHHHTTSS----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEEcCCCCCHHHHHHhcC----CcCHHHHHHHHHHHHHHHHHHHHC---CeEcCCCCHHHEEEecCCCCCCCEEEEECC
Confidence 9999999999999997543 389999999999999999999999 999999999999999888 79999995
No 70
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=214.64 Aligned_cols=142 Identities=25% Similarity=0.374 Sum_probs=120.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-------------------------ccHHHHHHHHHHHhc
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-------------------------GGELQFQTEVKIISM 348 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------------------------~~~~~~~~E~~~l~~ 348 (447)
++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+++++.
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~ 92 (298)
T 2zv2_A 13 NQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKK 92 (298)
T ss_dssp TTEEEEEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHT
T ss_pred cceEEEeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHh
Confidence 57888899999999999999964 5899999998643211 112468899999999
Q ss_pred CCCCCccceeeEEec--CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCC
Q 013258 349 AVHRNLLRLYGFCTT--VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVK 426 (447)
Q Consensus 349 l~H~niv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlk 426 (447)
++||||+++++++.. .+..++||||+++|+|.+++.. ..+++..+..++.|+++||+|||++ +|+|||||
T Consensus 93 l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlk 164 (298)
T 2zv2_A 93 LDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTL-----KPLSEDQARFYFQDLIKGIEYLHYQ---KIIHRDIK 164 (298)
T ss_dssp CCCTTBCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCS-----SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCC
T ss_pred CCCCCCCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCC
Confidence 999999999999986 5678999999999999886543 2489999999999999999999999 99999999
Q ss_pred CCceeeCCCCceeecccc
Q 013258 427 AANILLDEDADQSSKTIL 444 (447)
Q Consensus 427 p~NILl~~~~~~~i~df~ 444 (447)
|+|||++.++.+||+||-
T Consensus 165 p~Nil~~~~~~~kl~Dfg 182 (298)
T 2zv2_A 165 PSNLLVGEDGHIKIADFG 182 (298)
T ss_dssp GGGEEECTTSCEEECCCT
T ss_pred HHHEEECCCCCEEEecCC
Confidence 999999999999999995
No 71
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=99.92 E-value=1.9e-25 Score=212.35 Aligned_cols=143 Identities=20% Similarity=0.371 Sum_probs=124.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||+||+|+.. +++.||||+++...... ....+.+|+.+++.++||||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 81 (292)
T 3o0g_A 2 QKYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_dssp CSEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred CCceeeeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEe
Confidence 46788899999999999999965 58999999996544332 23568899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++ ++.+.+.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 82 ~~~~-~l~~~~~~~~---~~l~~~~~~~~~~ql~~~l~~lH~~---~ivH~dikp~Nil~~~~~~~kl~Dfg 146 (292)
T 3o0g_A 82 FCDQ-DLKKYFDSCN---GDLDPEIVKSFLFQLLKGLGFCHSR---NVLHRDLKPQNLLINRNGELKLANFG 146 (292)
T ss_dssp CCSE-EHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred cCCC-CHHHHHHhCC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEcCCCCEEEeecc
Confidence 9975 6666665432 2389999999999999999999999 99999999999999999999999995
No 72
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=99.92 E-value=9.1e-26 Score=217.83 Aligned_cols=143 Identities=30% Similarity=0.424 Sum_probs=124.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC----ceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT----EKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~----~~~l 369 (447)
.++|+..+.||+|+||+||+|+.. ++.||||+++... .....+.+|+.++..++||||+++++++.... ..++
T Consensus 23 ~~~y~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~l 99 (322)
T 3soc_A 23 SMPLQLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQD--KQSWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWL 99 (322)
T ss_dssp TEEEEEEEEEECSTTCEEEEEEET-TEEEEEEEECGGG--HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEE
T ss_pred hhhchhhheecccCceEEEEEEEC-CCEEEEEEeecCc--hHHHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEE
Confidence 456888899999999999999975 7899999986432 22345677999999999999999999998754 3699
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC-------CCCCeeecCCCCCceeeCCCCceeecc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-------CDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
||||+++|+|.++++.. .++|..+..++.|+++||+|||+. +.++|+||||||+|||+++++.+||+|
T Consensus 100 v~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~D 174 (322)
T 3soc_A 100 ITAFHEKGSLSDFLKAN-----VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIAD 174 (322)
T ss_dssp EEECCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECC
T ss_pred EEecCCCCCHHHHHHhc-----CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEcc
Confidence 99999999999999764 289999999999999999999986 234899999999999999999999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 175 Fg 176 (322)
T 3soc_A 175 FG 176 (322)
T ss_dssp CT
T ss_pred CC
Confidence 95
No 73
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=99.92 E-value=9.5e-26 Score=228.05 Aligned_cols=144 Identities=23% Similarity=0.364 Sum_probs=127.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..++|+..+.||+|+||+||+|++.++..||||.++... .....|.+|+.+++.++||||+++++++. .+..++|||
T Consensus 186 ~~~~~~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e 262 (454)
T 1qcf_A 186 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS--MSVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITE 262 (454)
T ss_dssp CGGGEEEEEEEECCSSEEEEEEEETTTEEEEEEEECTTS--BCHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEC
T ss_pred chHHeEEEEEcccCCceEEEEEEECCccEEEEEEecCCC--ccHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEe
Confidence 345677789999999999999999888999999997543 34567999999999999999999999986 567899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.++++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 263 ~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DFG 329 (454)
T 1qcf_A 263 FMAKGSLLDFLKSDEG--SKQPLPKLIDFSAQIAEGMAFIEQR---NYIHRDLRAANILVSASLVCKIADFG 329 (454)
T ss_dssp CCTTCBHHHHHHSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCSGGGEEECTTCCEEECSTT
T ss_pred ecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHHEEECCCCcEEEeeCC
Confidence 9999999999975421 1378899999999999999999999 99999999999999999999999995
No 74
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=99.92 E-value=2.1e-25 Score=218.83 Aligned_cols=142 Identities=24% Similarity=0.274 Sum_probs=127.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|+..+.||+|+||.||+++.. +++.||||++..... ....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 96 (361)
T 3uc3_A 19 SDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIME 96 (361)
T ss_dssp TTTEEEEEEESSSTTSSEEEEEETTTCCEEEEEEEESSTT--SCHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred CCcEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEecCcc--ccHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEE
Confidence 356888899999999999999965 689999999965432 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc--eeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+||-
T Consensus 97 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~ql~~~L~~LH~~---~ivH~Dlkp~Nill~~~~~~~~kl~Dfg 163 (361)
T 3uc3_A 97 YASGGELYERICNAG----RFSEDEARFFFQQLLSGVSYCHSM---QICHRDLKLENTLLDGSPAPRLKICDFG 163 (361)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCSCCCCGGGEEECSSSSCCEEECCCC
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCceEEEeecC
Confidence 999999999997654 389999999999999999999999 9999999999999998776 9999995
No 75
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=99.92 E-value=1e-25 Score=218.66 Aligned_cols=142 Identities=25% Similarity=0.424 Sum_probs=126.8
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+. .+++.||||+++... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 9 ~~Y~i~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~ 88 (336)
T 3h4j_B 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVI 88 (336)
T ss_dssp TTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CCEEEEEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEE
Confidence 5688889999999999999996 568999999986432 1223347899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+ +|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 89 E~~-~g~l~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kl~DFG 153 (336)
T 3h4j_B 89 EYA-GGELFDYIVEKK----RMTEDEGRRFFQQIICAIEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFG 153 (336)
T ss_dssp CCC-CEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TCCCCCCSTTTEEECTTCCEEECCSS
T ss_pred ECC-CCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCchhhEEEcCCCCEEEEEec
Confidence 999 789999987654 389999999999999999999999 99999999999999999999999995
No 76
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=99.92 E-value=1.7e-25 Score=213.44 Aligned_cols=144 Identities=26% Similarity=0.434 Sum_probs=124.4
Q ss_pred cCCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--Cce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~ 367 (447)
+.|+..+.||+|+||.||+|++ .+++.||||+++..........+.+|++++..++||||+++++++... ...
T Consensus 21 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 100 (302)
T 4e5w_A 21 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 100 (302)
T ss_dssp GGEEEEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCE
T ss_pred hhhhhhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceE
Confidence 3467779999999999999984 358899999997655445556799999999999999999999999876 668
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 101 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 171 (302)
T 4e5w_A 101 KLIMEFLPSGSLKEYLPKNKN---KINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQVKIGDFG 171 (302)
T ss_dssp EEEEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHhhcC---CcccCCCchheEEEcCCCCEEECccc
Confidence 999999999999999966432 388999999999999999999999 99999999999999999999999995
No 77
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=1.4e-25 Score=218.22 Aligned_cols=151 Identities=26% Similarity=0.406 Sum_probs=127.9
Q ss_pred HHhcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecC
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTV 364 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~ 364 (447)
...++|...+.||+|+||.||+|+. .++..||||.++..........+.+|+.++..+ +||||+++++++...
T Consensus 42 ~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~ 121 (344)
T 1rjb_A 42 FPRENLEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLS 121 (344)
T ss_dssp CCGGGEEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSS
T ss_pred cCHHHceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeC
Confidence 3456788889999999999999985 235689999997554444455799999999999 899999999999999
Q ss_pred CceEEEeecCCCCChhhHhhccCCC-------------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCC
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSS-------------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDV 425 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~-------------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDl 425 (447)
+..++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||
T Consensus 122 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Di 198 (344)
T 1rjb_A 122 GPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFK---SCVHRDL 198 (344)
T ss_dssp SSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHT---TEEETTC
T ss_pred CccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCC
Confidence 9999999999999999999865321 12378999999999999999999999 9999999
Q ss_pred CCCceeeCCCCceeeccccc
Q 013258 426 KAANILLDEDADQSSKTILR 445 (447)
Q Consensus 426 kp~NILl~~~~~~~i~df~~ 445 (447)
||+|||++.++.+||+||--
T Consensus 199 kp~NIll~~~~~~kL~Dfg~ 218 (344)
T 1rjb_A 199 AARNVLVTHGKVVKICDFGL 218 (344)
T ss_dssp SGGGEEEETTTEEEECCCGG
T ss_pred ChhhEEEcCCCcEEeCCCcc
Confidence 99999999999999999953
No 78
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=99.92 E-value=2.2e-25 Score=216.15 Aligned_cols=149 Identities=28% Similarity=0.444 Sum_probs=128.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
..++|...+.||+|+||.||+|+.. ++..||||+++.........++.+|++++..+ +||||+++++++..
T Consensus 33 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~ 112 (334)
T 2pvf_A 33 PRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 112 (334)
T ss_dssp CGGGEEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred CHhHeEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEcc
Confidence 3467888899999999999999863 46789999997654333445789999999999 89999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCC------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCcee
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANIL 431 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NIL 431 (447)
.+..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+. +|+||||||+|||
T Consensus 113 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIl 189 (334)
T 2pvf_A 113 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAARNVL 189 (334)
T ss_dssp SSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEE
T ss_pred CCceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCccceEE
Confidence 99999999999999999999865321 12378999999999999999999999 9999999999999
Q ss_pred eCCCCceeecccc
Q 013258 432 LDEDADQSSKTIL 444 (447)
Q Consensus 432 l~~~~~~~i~df~ 444 (447)
++.++.+||+||-
T Consensus 190 l~~~~~~kL~Dfg 202 (334)
T 2pvf_A 190 VTENNVMKIADFG 202 (334)
T ss_dssp ECTTCCEEECCCT
T ss_pred EcCCCCEEEcccc
Confidence 9999999999995
No 79
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=99.92 E-value=2.2e-25 Score=225.04 Aligned_cols=143 Identities=28% Similarity=0.434 Sum_probs=127.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC-ceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT-EKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~-~~~lv~ 371 (447)
..++|+..+.||+|+||.||+|.+. ++.||||.++... ....|.+|+.++++++||||+++++++...+ ..++||
T Consensus 191 ~~~~~~~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~ 266 (450)
T 1k9a_A 191 NMKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 266 (450)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEET-TEEEEEEEESSCT---TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEE
T ss_pred ChHHeEEEeeecCcCCeeEEEEEec-CCeEEEEEeCCch---HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEE
Confidence 3456778899999999999999985 7899999997543 3457999999999999999999999987665 789999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.++++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 267 e~~~~g~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 334 (450)
T 1k9a_A 267 EYMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFG 334 (450)
T ss_dssp ECCTTCBHHHHHHHHCT--TTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTSCEEECCCT
T ss_pred EecCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEECCCCCEEEeeCC
Confidence 99999999999987532 2368899999999999999999999 99999999999999999999999995
No 80
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=99.92 E-value=2e-25 Score=218.94 Aligned_cols=145 Identities=22% Similarity=0.300 Sum_probs=127.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..++|+..+.||+|+||.||+|... +++.||+|+++..... .....+.+|+.+++.++||||+++++++.+.+..++|
T Consensus 27 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv 106 (362)
T 2bdw_A 27 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 106 (362)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccCeEEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEE
Confidence 3467888999999999999999965 5899999999654322 2234688999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~ 444 (447)
|||+++|+|.+.+.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++ .+||+||-
T Consensus 107 ~e~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~al~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~DfG 176 (362)
T 2bdw_A 107 FDLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 176 (362)
T ss_dssp ECCCCSCBHHHHHTTCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEeecC
Confidence 99999999999987643 388999999999999999999999 999999999999998764 59999995
No 81
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=99.92 E-value=2.1e-25 Score=225.97 Aligned_cols=143 Identities=25% Similarity=0.434 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+.. +|+.||||+++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 16 ~~Y~l~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~ 95 (476)
T 2y94_A 16 GHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVM 95 (476)
T ss_dssp TTEEEEEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cCEEEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEE
Confidence 56788899999999999999965 699999999964321 223456899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 96 E~~~gg~L~~~l~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---givHrDLkp~NIll~~~~~vkL~DFG 161 (476)
T 2y94_A 96 EYVSGGELFDYICKNG----RLDEKESRRLFQQILSGVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 161 (476)
T ss_dssp ECCSSEEHHHHTTSSS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEECTTCCEEECCCS
T ss_pred eCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcccccHHHEEEecCCCeEEEecc
Confidence 9999999999997543 389999999999999999999999 99999999999999999999999995
No 82
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=99.92 E-value=2.5e-25 Score=228.15 Aligned_cols=147 Identities=31% Similarity=0.430 Sum_probs=130.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|...+.||+|+||+||+|+.. +|+.||+|+++.... ......+.+|++++..++||||+++++++...+..++||
T Consensus 185 ~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVm 264 (543)
T 3c4z_A 185 DWFLDFRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVM 264 (543)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEE
Confidence 56888899999999999999975 699999999965431 233456889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.........+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 265 E~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~---gIvHrDLKP~NILl~~~g~vkL~DFG 334 (543)
T 3c4z_A 265 TIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLG 334 (543)
T ss_dssp CCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred EeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHc---CCcccCCChHHEEEeCCCCEEEeecc
Confidence 99999999999987543344689999999999999999999999 99999999999999999999999995
No 83
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=99.92 E-value=1.2e-25 Score=221.26 Aligned_cols=143 Identities=27% Similarity=0.348 Sum_probs=118.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHH-HhcCCCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
++|+..+.||+|+||+||+|+.. +++.||||+++..... .....+.+|..+ ++.++||||+++++++.+.+..++|
T Consensus 38 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv 117 (373)
T 2r5t_A 38 SDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFV 117 (373)
T ss_dssp GGEEEEEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEE
T ss_pred hheEEEEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEE
Confidence 46778899999999999999975 5889999999654322 223346677776 5778999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 118 ~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---givHrDlkp~NIll~~~g~ikL~DFG 184 (373)
T 2r5t_A 118 LDYINGGELFYHLQRER----CFLEPRARFYAAEIASALGYLHSL---NIVYRDLKPENILLDSQGHIVLTDFG 184 (373)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred EeCCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEECCCCCEEEeeCc
Confidence 99999999999998753 378899999999999999999999 99999999999999999999999995
No 84
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=99.92 E-value=6.5e-26 Score=228.76 Aligned_cols=144 Identities=24% Similarity=0.316 Sum_probs=120.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|+..+.||+|+||.||+|+.. +++.||||+++... .......+.+|+.+++.++||||+++++++...+..++|
T Consensus 147 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv 226 (446)
T 4ejn_A 147 MNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFV 226 (446)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEE
T ss_pred hHHcEEeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEE
Confidence 356888899999999999999964 68999999996542 222334678999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|+++||+|||+ . +|+||||||+|||++.++.+||+||-
T Consensus 227 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~---giiHrDlkp~NIll~~~~~~kl~DFG 294 (446)
T 4ejn_A 227 MEYANGGELFFHLSRER----VFSEDRARFYGAEIVSALDYLHSEK---NVVYRDLKLENLMLDKDGHIKITDFG 294 (446)
T ss_dssp ECCCSSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHHT---CCCCCCCCGGGEEECSSSCEEECCCC
T ss_pred EeeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHhhcC---CEEECCCCHHHEEECCCCCEEEccCC
Confidence 99999999999997654 38999999999999999999998 7 89999999999999999999999995
No 85
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=99.92 E-value=1.8e-25 Score=211.34 Aligned_cols=144 Identities=23% Similarity=0.315 Sum_probs=124.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|++.+.||+|+||.||+|+... +..||+|.++..........+.+|+.+++.++||||+++++++. .+..++
T Consensus 14 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~l 92 (281)
T 1mp8_A 14 RERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWI 92 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEC-SSSCEE
T ss_pred hHHeEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEEc-cCccEE
Confidence 4567788999999999999998642 45799999875443334457999999999999999999999974 567899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 93 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 161 (281)
T 1mp8_A 93 IMELCTLGELRSFLQVRKY---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 161 (281)
T ss_dssp EEECCTTEEHHHHHHHTTT---TSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECC--
T ss_pred EEecCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeecccccHHHEEECCCCCEEECccc
Confidence 9999999999999986532 488999999999999999999999 99999999999999999999999995
No 86
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=99.92 E-value=1.7e-25 Score=219.79 Aligned_cols=145 Identities=16% Similarity=0.236 Sum_probs=125.3
Q ss_pred HhcCCCCCCccccCCCceEEEEE------eCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEec
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGR------LADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTT 363 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~------~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~ 363 (447)
..++|.+.+.||+|+||+||+|. ..+++.||||+++.. ...++.+|++++..++ |+||+++++++..
T Consensus 63 ~~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~ 138 (365)
T 3e7e_A 63 GSKLVYVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPA----NPWEFYIGTQLMERLKPSMQHMFMKFYSAHLF 138 (365)
T ss_dssp SSSEEEEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSC----CHHHHHHHHHHHHHSCGGGGGGBCCEEEEEEC
T ss_pred CCEEEEEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCC----ChhHHHHHHHHHHHhhhhhhhhhhhhheeeec
Confidence 34668888999999999999994 346889999998643 3446788888888877 9999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCC-CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC--------
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQS-SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-------- 434 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~-~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-------- 434 (447)
.+..++||||+++|+|.+++..... ....++|..+..|+.|+++||+|||++ +||||||||+|||++.
T Consensus 139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~---~ivHrDiKp~NIll~~~~~~~~~~ 215 (365)
T 3e7e_A 139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDC---EIIHGDIKPDNFILGNGFLEQDDE 215 (365)
T ss_dssp SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECGGGTCC---
T ss_pred CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeecCCCCHHHEEecccccCcccc
Confidence 9999999999999999999975321 223589999999999999999999999 9999999999999998
Q ss_pred ---CCceeecccc
Q 013258 435 ---DADQSSKTIL 444 (447)
Q Consensus 435 ---~~~~~i~df~ 444 (447)
++.+||+||-
T Consensus 216 ~~~~~~~kl~DFG 228 (365)
T 3e7e_A 216 DDLSAGLALIDLG 228 (365)
T ss_dssp ---CTTEEECCCT
T ss_pred ccccCCEEEeeCc
Confidence 8999999996
No 87
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=99.92 E-value=2.5e-25 Score=228.93 Aligned_cols=146 Identities=27% Similarity=0.363 Sum_probs=129.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|...+.||+|+||+||+|+.. +|+.||||+++... .......+.+|+.++..++||||+++++++.+.+..++|
T Consensus 183 ~~~f~~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lV 262 (576)
T 2acx_A 183 KNTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV 262 (576)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEE
T ss_pred ccceEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEE
Confidence 456888899999999999999965 69999999986432 223345688999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++..... ..+++..+..++.||+.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 263 mEy~~gg~L~~~l~~~~~--~~l~e~~~~~i~~qIl~aL~yLH~~---gIvHrDLKPeNILld~~g~vKL~DFG 331 (576)
T 2acx_A 263 LTLMNGGDLKFHIYHMGQ--AGFPEARAVFYAAEICCGLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLG 331 (576)
T ss_dssp ECCCCSCBHHHHHHSSSS--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCT
T ss_pred EEcCCCCcHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CEeccCCchheEEEeCCCCeEEEecc
Confidence 999999999999976432 2489999999999999999999999 99999999999999999999999995
No 88
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=99.92 E-value=7.3e-26 Score=217.34 Aligned_cols=144 Identities=24% Similarity=0.350 Sum_probs=126.2
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc--cHHHHHHHHHHHhcCCCCCccceeeEEecCCc----
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG--GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE---- 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~--~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~---- 366 (447)
.++|++.+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.++..++||||+++++++.....
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~ 90 (311)
T 3ork_A 11 SDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPL 90 (311)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEE
T ss_pred cCcEEEEEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcc
Confidence 35688889999999999999996 568999999997543222 23468899999999999999999999876544
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.++++... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 91 ~~lv~e~~~g~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 161 (311)
T 3ork_A 91 PYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFG 161 (311)
T ss_dssp EEEEEECCCEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEETTSCEEECCCS
T ss_pred cEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCcCCCCHHHEEEcCCCCEEEeecc
Confidence 399999999999999998654 389999999999999999999999 99999999999999999999999995
No 89
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=99.92 E-value=1.9e-25 Score=209.41 Aligned_cols=146 Identities=26% Similarity=0.382 Sum_probs=126.0
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|+.. ++.||||+++..... .....+.+|+.+++.++||||+++++++... +..++||
T Consensus 10 ~~y~~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 88 (271)
T 3kmu_A 10 KQLNFLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLIT 88 (271)
T ss_dssp GGCEEEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEE
T ss_pred HHhHHHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeee
Confidence 56778899999999999999985 889999999754322 2334699999999999999999999999887 7789999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... ..+++..+..++.|+++||+|||+. .++|+||||||+|||+++++.++++||-
T Consensus 89 e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~-~~~i~H~dikp~Nil~~~~~~~~l~~~~ 158 (271)
T 3kmu_A 89 HWMPYGSLYNVLHEGTN--FVVDQSQAVKFALDMARGMAFLHTL-EPLIPRHALNSRSVMIDEDMTARISMAD 158 (271)
T ss_dssp ECCTTCBHHHHHHSCSS--CCCCHHHHHHHHHHHHHHHHHHTTS-SSCCTTCCCSGGGEEECTTSCEEEEGGG
T ss_pred cccCCCcHHHHHhhccc--CCCCHHHHHHHHHHHHHHHHHHhcC-CCceecCCCccceEEEcCCcceeEEecc
Confidence 99999999999986532 2489999999999999999999998 1229999999999999999999988663
No 90
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=99.92 E-value=1e-25 Score=217.19 Aligned_cols=153 Identities=27% Similarity=0.426 Sum_probs=131.9
Q ss_pred HHHHHhcCCCCCCccccCCCceEEEEEeC------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe
Q 013258 289 ELQVATDGFSNKNILGRGGFGKVYKGRLA------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT 362 (447)
Q Consensus 289 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~ 362 (447)
+.+...++|...+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++.
T Consensus 19 ~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 98 (322)
T 1p4o_A 19 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVS 98 (322)
T ss_dssp TTBCCGGGEEEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEEC
T ss_pred hhcchhhheeeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEc
Confidence 33445677888999999999999999753 367899999975543334456899999999999999999999999
Q ss_pred cCCceEEEeecCCCCChhhHhhccC------CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 363 TVTEKLLVYPYMTNGSVASRLRERQ------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 363 ~~~~~~lv~e~~~~gsL~~~l~~~~------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
..+..++||||+++|+|.+++.... .....+++..+..++.|++.||+|||++ +|+||||||+|||+++++
T Consensus 99 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~NIli~~~~ 175 (322)
T 1p4o_A 99 QGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDF 175 (322)
T ss_dssp SSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCSGGGEEECTTC
T ss_pred cCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHC---CCccCCCccceEEEcCCC
Confidence 9999999999999999999997632 1123468999999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+||+||-
T Consensus 176 ~~kl~Dfg 183 (322)
T 1p4o_A 176 TVKIGDFG 183 (322)
T ss_dssp CEEECCTT
T ss_pred eEEECcCc
Confidence 99999995
No 91
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=99.92 E-value=3.3e-25 Score=208.64 Aligned_cols=144 Identities=25% Similarity=0.376 Sum_probs=129.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|+.. +++.||||.++..........+.+|+.+++.++||||+++++++...+..++|||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 85 (276)
T 2yex_A 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLE 85 (276)
T ss_dssp HHHEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ecceEEEEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEE
Confidence 356888899999999999999975 6899999998655444445679999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+|++||-
T Consensus 86 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 150 (276)
T 2yex_A 86 YCSGGELFDRIEPDI----GMPEPDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFG 150 (276)
T ss_dssp CCTTEEGGGGSBTTT----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCcHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCChHHEEEccCCCEEEeeCC
Confidence 999999999986542 388999999999999999999999 99999999999999999999999995
No 92
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=99.92 E-value=1.8e-26 Score=224.00 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=117.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccc-------cccHHHHHHHHHHHhcCC---------CCCccce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-------SGGELQFQTEVKIISMAV---------HRNLLRL 357 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~---------H~niv~l 357 (447)
.++|+..+.||+|+||+||+|+. +|+.||||+++.... ......+.+|+.+++.++ |||||++
T Consensus 19 ~~~y~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l 97 (336)
T 2vuw_A 19 TEKLQRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGL 97 (336)
T ss_dssp HHHHHTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCE
T ss_pred cccchheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhh
Confidence 35678889999999999999998 689999999975432 222357889999998886 6666666
Q ss_pred eeEE-----------------ec-------------CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHH
Q 013258 358 YGFC-----------------TT-------------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSAR 407 (447)
Q Consensus 358 ~~~~-----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~ 407 (447)
.+.+ .+ .+..++||||+++|++.+.+... .+++..+..++.|++.
T Consensus 98 ~~~~~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~-----~~~~~~~~~i~~qi~~ 172 (336)
T 2vuw_A 98 NSVHCVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK-----LSSLATAKSILHQLTA 172 (336)
T ss_dssp EEEEEEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT-----CCCHHHHHHHHHHHHH
T ss_pred cceeEecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc-----CCCHHHHHHHHHHHHH
Confidence 6543 32 67899999999999877776432 3789999999999999
Q ss_pred HHhhhh-cCCCCCeeecCCCCCceeeCCCC--------------------ceeecccc
Q 013258 408 GLSYLH-EHCDPKIIHRDVKAANILLDEDA--------------------DQSSKTIL 444 (447)
Q Consensus 408 gL~yLH-~~~~~~ivHrDlkp~NILl~~~~--------------------~~~i~df~ 444 (447)
||+||| +. +|+||||||+|||++.++ .+||+||-
T Consensus 173 aL~~lH~~~---~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG 227 (336)
T 2vuw_A 173 SLAVAEASL---RFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYT 227 (336)
T ss_dssp HHHHHHHHH---CCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCT
T ss_pred HHHHHHHhC---CEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeecc
Confidence 999999 88 999999999999999987 89999995
No 93
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=99.92 E-value=1.7e-25 Score=214.54 Aligned_cols=148 Identities=29% Similarity=0.391 Sum_probs=129.6
Q ss_pred hcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 366 (447)
.++|...+.||+|+||.||+|+. .+++.||||.++..........+.+|+.++..+ +||||+++++++...+.
T Consensus 22 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 101 (313)
T 1t46_A 22 RNRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGP 101 (313)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSS
T ss_pred hhhhhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCC
Confidence 45678889999999999999984 246799999997554333445799999999999 99999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCC--------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee
Q 013258 367 KLLVYPYMTNGSVASRLRERQSS--------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL 432 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~--------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl 432 (447)
.++||||+++|+|.+++...... ...+++..+..++.|+++||+|||++ +|+||||||+|||+
T Consensus 102 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~ 178 (313)
T 1t46_A 102 TLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRDLAARNILL 178 (313)
T ss_dssp CEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEE
T ss_pred cEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCccceEEE
Confidence 99999999999999999875321 12488999999999999999999999 99999999999999
Q ss_pred CCCCceeecccc
Q 013258 433 DEDADQSSKTIL 444 (447)
Q Consensus 433 ~~~~~~~i~df~ 444 (447)
++++.+||+||-
T Consensus 179 ~~~~~~kl~Dfg 190 (313)
T 1t46_A 179 THGRITKICDFG 190 (313)
T ss_dssp ETTTEEEECCCG
T ss_pred cCCCCEEEcccc
Confidence 999999999995
No 94
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=99.92 E-value=1.6e-25 Score=216.56 Aligned_cols=143 Identities=27% Similarity=0.473 Sum_probs=120.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||+||+|++. +++ .||+|.++.........++.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~-~~~ 93 (327)
T 3poz_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESSS-EEE
T ss_pred HHcccceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCC-eEE
Confidence 46778899999999999999854 344 468888865544455668999999999999999999999998754 789
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 94 v~e~~~~g~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~Dikp~NIll~~~~~~kl~Dfg 162 (327)
T 3poz_A 94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162 (327)
T ss_dssp EEECCTTCBHHHHHHHSTT---SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTT
T ss_pred EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCChheEEECCCCCEEEccCc
Confidence 9999999999999987543 489999999999999999999999 99999999999999999999999995
No 95
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=99.92 E-value=9.9e-26 Score=214.55 Aligned_cols=144 Identities=25% Similarity=0.435 Sum_probs=125.5
Q ss_pred hcCCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~ 366 (447)
.++|++.+.||+|+||.||+|++ .+++.||||+++... ......+.+|++++..++||||+++++++.. ...
T Consensus 9 ~~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 87 (295)
T 3ugc_A 9 ERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRN 87 (295)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTS
T ss_pred HHHhhhhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCC-HHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCc
Confidence 35677889999999999999984 258899999986432 2234578999999999999999999999865 355
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 88 ~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 159 (295)
T 3ugc_A 88 LKLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 159 (295)
T ss_dssp CEEEEECCTTCBHHHHHHHCGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred eEEEEEeCCCCCHHHHHHhccc---ccCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHhhEEEcCCCeEEEccCc
Confidence 8999999999999999987532 388999999999999999999999 99999999999999999999999995
No 96
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=99.92 E-value=7.3e-25 Score=206.38 Aligned_cols=142 Identities=23% Similarity=0.393 Sum_probs=116.7
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+. .+++.||+|+++.... ......+.+|+.+++.++||||+++++++...+..++||
T Consensus 13 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 92 (275)
T 2eue_A 13 GNYQIVKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVI 92 (275)
T ss_dssp CCBCCCC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred cceEEEEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEe
Confidence 5789999999999999999985 4689999999865432 223457899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+ +++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 93 e~~-~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 157 (275)
T 2eue_A 93 EYA-GNELFDYIVQRD----KMSEQEARRFFQQIISAVEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFG 157 (275)
T ss_dssp ECC-CEEHHHHHHTSS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCSS
T ss_pred hhc-CCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeeccCChHhEEECCCCCEEEeecc
Confidence 999 678888887643 389999999999999999999999 99999999999999999999999995
No 97
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=99.92 E-value=3.5e-25 Score=207.37 Aligned_cols=142 Identities=27% Similarity=0.427 Sum_probs=128.8
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|+..+.||+|+||.||+|+..+++.||+|.++.... ...++.+|++++..++||||+++++++...+..++||||+
T Consensus 8 ~~y~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 85 (267)
T 3t9t_A 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAM--SEEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFM 85 (267)
T ss_dssp GGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTB--CHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCC
T ss_pred hheeeeeEecCCCceeEEEEEecCCCeEEEEEccccCC--CHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCC
Confidence 56777899999999999999988888999999975432 3457999999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++++|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+||-
T Consensus 86 ~~~~L~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 149 (267)
T 3t9t_A 86 EHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEA---CVIHRDLAARNCLVGENQVIKVSDFG 149 (267)
T ss_dssp TTCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECGGGCEEECCTT
T ss_pred CCCcHHHHHhhCcc---cCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEECCCCCEEEcccc
Confidence 99999999986532 478999999999999999999999 99999999999999999999999995
No 98
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=99.92 E-value=2.9e-25 Score=223.32 Aligned_cols=145 Identities=19% Similarity=0.265 Sum_probs=126.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..++|+..+.||+|+||.||+|... +|+.||+|.+...... .....+.+|+++++.++||||+++++++.+.+..++|
T Consensus 9 ~~~~Y~i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv 88 (444)
T 3soa_A 9 FTEEYQLFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLI 88 (444)
T ss_dssp HHHHEEEEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEE
T ss_pred ccCCeEEEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEE
Confidence 3567888999999999999999864 6899999998654322 2234689999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC---CCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD---EDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~~i~df~ 444 (447)
|||+++|+|.+.+.... .+++..+..++.|+++||+|||++ +|+||||||+|||++ +++.+||+||-
T Consensus 89 ~E~~~gg~L~~~i~~~~----~~~e~~~~~i~~qil~aL~~lH~~---givHrDlKp~NIll~~~~~~~~vkL~DFG 158 (444)
T 3soa_A 89 FDLVTGGELFEDIVARE----YYSEADASHCIQQILEAVLHCHQM---GVVHRNLKPENLLLASKLKGAAVKLADFG 158 (444)
T ss_dssp ECCCBCCBHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSSTTEEESBSSTTCCEEECCCS
T ss_pred EEeCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEeccCCCCcEEEccCc
Confidence 99999999999998753 389999999999999999999999 999999999999999 46789999995
No 99
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=99.92 E-value=2.9e-25 Score=209.99 Aligned_cols=148 Identities=26% Similarity=0.375 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|+..+.||+|+||.||+|+.. +++.||||.++.... .....++.+|+..+..+ +||||+++++++.+.+..++|
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv 89 (289)
T 1x8b_A 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQ 89 (289)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEE
T ss_pred cchhhhhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEE
Confidence 456888899999999999999975 699999999865432 22345688999999998 999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC--------------
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-------------- 436 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-------------- 436 (447)
|||+++|+|.+++.........+++..+..++.|+++||+|||++ +|+||||||+|||++.++
T Consensus 90 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~ 166 (289)
T 1x8b_A 90 NEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSM---SLVHMDIKPSNIFISRTSIPNAASEEGDEDDW 166 (289)
T ss_dssp EECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEC-----------------
T ss_pred EEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeecCCCHHHEEEcCCCCCcccccccccccc
Confidence 999999999999986532223489999999999999999999999 999999999999999544
Q ss_pred -----ceeecccc
Q 013258 437 -----DQSSKTIL 444 (447)
Q Consensus 437 -----~~~i~df~ 444 (447)
.+|++||-
T Consensus 167 ~~~~~~~kl~Dfg 179 (289)
T 1x8b_A 167 ASNKVMFKIGDLG 179 (289)
T ss_dssp ---CCCEEECCCT
T ss_pred cCCceEEEEcccc
Confidence 78999985
No 100
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=99.92 E-value=5.8e-26 Score=219.97 Aligned_cols=151 Identities=27% Similarity=0.379 Sum_probs=130.0
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeCC-C-----cEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLAD-G-----KLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT 363 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~-----~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~ 363 (447)
+...++|...+.||+|+||.||+|.... + ..||+|.++..........+.+|+.++..+ +||||+++++++..
T Consensus 42 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~ 121 (333)
T 2i1m_A 42 EFPRNNLQFGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTH 121 (333)
T ss_dssp BCCTTSEEEEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECS
T ss_pred cCCHHHceeeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEec
Confidence 3445778889999999999999998642 3 479999997654333455799999999999 89999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCC----------CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQS----------SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 433 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~----------~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~ 433 (447)
.+..++||||+++|+|.+++..... ....+++..+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 122 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~ 198 (333)
T 2i1m_A 122 GGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLLT 198 (333)
T ss_dssp SSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGCEEE
T ss_pred CCceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcC---CcccCCcccceEEEC
Confidence 9999999999999999999975321 122478999999999999999999999 999999999999999
Q ss_pred CCCceeecccc
Q 013258 434 EDADQSSKTIL 444 (447)
Q Consensus 434 ~~~~~~i~df~ 444 (447)
+++.+||+||-
T Consensus 199 ~~~~~kl~Dfg 209 (333)
T 2i1m_A 199 NGHVAKIGDFG 209 (333)
T ss_dssp GGGEEEBCCCG
T ss_pred CCCeEEECccc
Confidence 99999999995
No 101
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=99.92 E-value=3e-25 Score=213.14 Aligned_cols=144 Identities=24% Similarity=0.211 Sum_probs=122.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|+..+.||+|+||+||+|+.. +++.||||++...... ....++..|+..+..+ +||||+++++++.+.+..++|
T Consensus 56 ~~~y~~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv 135 (311)
T 3p1a_A 56 QQSFQRLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQ 135 (311)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEE
T ss_pred hhheeeeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEE
Confidence 356888899999999999999976 6999999988543222 2233455666655555 899999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+ +++|.+++..... .++|..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 136 ~e~~-~~~L~~~~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kl~DFG 202 (311)
T 3p1a_A 136 TELC-GPSLQQHCEAWGA---SLPEAQVWGYLRDTLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFG 202 (311)
T ss_dssp EECC-CCBHHHHHHHHCS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECGGGCEEECCCT
T ss_pred Eecc-CCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCCCCHHHEEECCCCCEEEccce
Confidence 9999 6799998877542 489999999999999999999999 99999999999999999999999995
No 102
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=99.92 E-value=2.1e-25 Score=225.35 Aligned_cols=143 Identities=27% Similarity=0.423 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|.+.++..||||.++... ....+|.+|+++++.++||||+++++++.. +..++||||
T Consensus 183 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~ 259 (452)
T 1fmk_A 183 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEY 259 (452)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEETTTEEEEEEECCTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECC
T ss_pred hhHceeeeeecCCCCeEEEEEEECCCceEEEEEeccCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehh
Confidence 45577778999999999999999878889999997543 234579999999999999999999999876 678999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.++++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 260 ~~~gsL~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~Nill~~~~~~kl~DfG 325 (452)
T 1fmk_A 260 MSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 325 (452)
T ss_dssp CTTCBHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred hcCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChhhEEECCCCCEEECCCc
Confidence 999999999975321 2388999999999999999999999 99999999999999999999999995
No 103
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=99.92 E-value=1.1e-24 Score=209.25 Aligned_cols=142 Identities=25% Similarity=0.340 Sum_probs=125.1
Q ss_pred cCCCCC-CccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNK-NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+.|.+. +.||+|+||.||+|+. .+++.||||+++... ......+.+|++++.++ +||||+++++++...+..++||
T Consensus 12 ~~y~i~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~ 90 (316)
T 2ac3_A 12 DVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQP-GHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVF 90 (316)
T ss_dssp TSCEECCCCCCCCSSEEEEEEECSSSCCEEEEEEEECCS-SCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred eeEEecCceecCCceEEEEEEEEcCCCcEEEEEEEeeCc-chhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEE
Confidence 456663 7899999999999995 468999999996543 33455789999999884 7999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+||-
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg 159 (316)
T 2ac3_A 91 EKMRGGSILSHIHKRR----HFNELEASVVVQDVASALDFLHNK---GIAHRDLKPENILCEHPNQVSPVKICDFD 159 (316)
T ss_dssp ECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESCSSSSCSEEECCTT
T ss_pred EcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhC---CceeCCCCHHHEEEccCCCcCceEEEEcc
Confidence 9999999999998753 388999999999999999999999 9999999999999998876 9999994
No 104
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=99.92 E-value=3.5e-25 Score=209.04 Aligned_cols=144 Identities=32% Similarity=0.474 Sum_probs=128.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|++.+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 87 (279)
T 3fdn_A 8 LEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLI 87 (279)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cccEEEeeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEE
Confidence 456888899999999999999865 578999999854321 22345689999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.++|+||-
T Consensus 88 ~e~~~~~~l~~~l~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~i~H~dlkp~Nili~~~~~~~l~Dfg 154 (279)
T 3fdn_A 88 LEYAPLGTVYRELQKLS----KFDEQRTATYITELANALSYCHSK---RVIHRDIKPENLLLGSAGELKIADFG 154 (279)
T ss_dssp ECCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TCEECCCCGGGEEECTTSCEEECSCC
T ss_pred EecCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEecccCChHhEEEcCCCCEEEEecc
Confidence 99999999999998753 388999999999999999999999 99999999999999999999999995
No 105
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=99.92 E-value=4.1e-25 Score=223.68 Aligned_cols=142 Identities=20% Similarity=0.321 Sum_probs=115.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec-----CCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT-----VTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-----~~~~ 367 (447)
++|++.+.||+|+||+||+|+.. +++.||||++...... ....++.+|++++..++|||||++++++.. ....
T Consensus 53 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~ 132 (458)
T 3rp9_A 53 DRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDEL 132 (458)
T ss_dssp TTEEECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCE
T ss_pred CCeEEeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceE
Confidence 57888999999999999999865 6899999998643222 223468999999999999999999999844 3568
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+ +|+|.+++.... .+++..+..++.|+++||+|||+. +||||||||+|||++.++.+||+||-
T Consensus 133 ~lv~e~~-~~~L~~~~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~---~iiHrDlKp~NILl~~~~~~kl~DFG 201 (458)
T 3rp9_A 133 YVVLEIA-DSDFKKLFRTPV----YLTELHIKTLLYNLLVGVKYVHSA---GILHRDLKPANCLVNQDCSVKVCDFG 201 (458)
T ss_dssp EEEECCC-SEEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEecc-ccchhhhcccCC----CCCHHHHHHHHHHHHHHHHHHHhC---CcCCCCCChhhEEECCCCCEeecccc
Confidence 9999998 579999987643 389999999999999999999999 99999999999999999999999995
No 106
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=4.2e-25 Score=214.19 Aligned_cols=144 Identities=29% Similarity=0.466 Sum_probs=126.4
Q ss_pred cCCCCCCccccCCCceEEEEEeCC-----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD-----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|...+.||+|+||.||+|+... +..||||.++..........+.+|+.++..++||||+++++++...+..++
T Consensus 44 ~~~~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 123 (333)
T 1mqb_A 44 SCVTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMI 123 (333)
T ss_dssp TTEEEEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEE
T ss_pred HHhhcccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEE
Confidence 345667899999999999998542 246999999765433344578999999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 124 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 192 (333)
T 1mqb_A 124 ITEYMENGALDKFLREKDG---EFSVLQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFG 192 (333)
T ss_dssp EEECCTTEEHHHHHHHTTT---CSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCCC
T ss_pred EEeCCCCCcHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCChheEEECCCCcEEECCCC
Confidence 9999999999999976432 489999999999999999999999 99999999999999999999999995
No 107
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=99.92 E-value=5.2e-25 Score=209.94 Aligned_cols=138 Identities=28% Similarity=0.409 Sum_probs=119.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEec----CCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTT----VTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~----~~~~ 367 (447)
.++|+..+.||+|+||+||+|+. +++.||||+++.. ....+.+|.+++.. ++||||+++++++.. ....
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~ 81 (301)
T 3q4u_A 7 ARDITLLECVGKGRYGEVWRGSW-QGENVAVKIFSSR----DEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81 (301)
T ss_dssp GGGCEEEEEEEECSSEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEE
T ss_pred cCcEEEEEeeccCCCcEEEEEEE-CCEEEEEEEeccc----cchhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCcee
Confidence 45788899999999999999998 6899999998543 23455666666655 899999999998654 3457
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh--------cCCCCCeeecCCCCCceeeCCCCcee
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
++||||+++|+|.++++.. .+++..+..++.|+++||+||| +. +|+||||||+|||++.++.+|
T Consensus 82 ~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nill~~~~~~k 153 (301)
T 3q4u_A 82 WLITHYHEMGSLYDYLQLT-----TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKP---AIAHRDLKSKNILVKKNGQCC 153 (301)
T ss_dssp EEEECCCTTCBHHHHHTTC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBC---EEECSCCCGGGEEECTTSCEE
T ss_pred EEehhhccCCCHHHHHhhc-----ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCC---CeecCCCChHhEEEcCCCCEE
Confidence 9999999999999999643 3899999999999999999999 66 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 154 l~Dfg 158 (301)
T 3q4u_A 154 IADLG 158 (301)
T ss_dssp ECCCT
T ss_pred EeeCC
Confidence 99995
No 108
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=99.92 E-value=4.3e-25 Score=219.27 Aligned_cols=147 Identities=22% Similarity=0.313 Sum_probs=128.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--ceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~~lv~ 371 (447)
++|.+.+.||+|+||+||+|+.. +++.||||+++..........+.+|+++++.++||||+++++++...+ ..++||
T Consensus 9 ~~y~i~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~ 88 (396)
T 4eut_A 9 HLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIM 88 (396)
T ss_dssp EEEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEE
T ss_pred CceEEEEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEE
Confidence 45778899999999999999975 489999999976554445567889999999999999999999988755 679999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee----CCCCceeeccccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSSKTILR 445 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~~i~df~~ 445 (447)
||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+|||+ +.++.+||+||--
T Consensus 89 e~~~~g~L~~~l~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~ 162 (396)
T 4eut_A 89 EFCPCGSLYTVLEEPSN-AYGLPESEFLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGA 162 (396)
T ss_dssp CCCTTEEHHHHTTSGGG-TTCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEECTTSCEEEEECCGGG
T ss_pred ecCCCCCHHHHHHhhhc-ccCCCHHHHHHHHHHHHHHHHHHHHC---CEEECCcCHHHEEEeecCCCceeEEEecCCC
Confidence 99999999999976432 22389999999999999999999999 99999999999999 7788899999953
No 109
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=99.92 E-value=4.1e-25 Score=215.73 Aligned_cols=141 Identities=28% Similarity=0.359 Sum_probs=120.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+|++++..++||||+++++++...+..++|||
T Consensus 52 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 128 (349)
T 2w4o_A 52 SDFFEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTV---DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLE 128 (349)
T ss_dssp GGTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEC-------------CHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred cCcEEEeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch---hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEE
Confidence 456888899999999999999975 58899999986542 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++. ++.+||+||-
T Consensus 129 ~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~NIll~~~~~~~~~kl~Dfg 196 (349)
T 2w4o_A 129 LVTGGELFDRIVEKG----YYSERDAADAVKQILEAVAYLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFG 196 (349)
T ss_dssp CCCSCBHHHHHTTCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEESSSSTTCCEEECCCC
T ss_pred eCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEecCCCcccEEEecCCCCCCEEEccCc
Confidence 999999999997643 388999999999999999999999 9999999999999976 8899999995
No 110
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=99.92 E-value=3.8e-25 Score=213.29 Aligned_cols=150 Identities=27% Similarity=0.395 Sum_probs=120.2
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeCC-Cc---EEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLAD-GK---LVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~-~~---~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
...++|+..+.||+|+||.||+|+... +. .||||.++.... .....++.+|+++++.++||||+++++++.....
T Consensus 20 i~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~ 99 (323)
T 3qup_A 20 IPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRA 99 (323)
T ss_dssp CC---CEEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC--
T ss_pred cChhHeEEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeecccc
Confidence 345678889999999999999998653 32 799999975432 2334579999999999999999999999987665
Q ss_pred e------EEEeecCCCCChhhHhhccCC--CCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 367 K------LLVYPYMTNGSVASRLRERQS--SLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 367 ~------~lv~e~~~~gsL~~~l~~~~~--~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
. ++||||+++|+|.+++..... ....+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+
T Consensus 100 ~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~ivH~Dikp~NIli~~~~~~ 176 (323)
T 3qup_A 100 KGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTV 176 (323)
T ss_dssp -----CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCE
T ss_pred ccCCCccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcC---CcccCCCCcceEEEcCCCCE
Confidence 5 999999999999999975421 122488999999999999999999999 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
||+||-
T Consensus 177 kl~Dfg 182 (323)
T 3qup_A 177 CVADFG 182 (323)
T ss_dssp EECCCC
T ss_pred EEeecc
Confidence 999995
No 111
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=99.92 E-value=4.8e-25 Score=213.07 Aligned_cols=147 Identities=29% Similarity=0.489 Sum_probs=125.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcE--EEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKL--VAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~--vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
++|+..+.||+|+||.||+|+.. ++.. +|+|.++..........+.+|++++.++ +||||+++++++...+..++|
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 104 (327)
T 1fvr_A 25 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 104 (327)
T ss_dssp GGCEEEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEE
T ss_pred HHccceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEE
Confidence 56778899999999999999854 4654 4999987544444455799999999999 899999999999999999999
Q ss_pred eecCCCCChhhHhhccC------------CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCce
Q 013258 371 YPYMTNGSVASRLRERQ------------SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQ 438 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~------------~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~ 438 (447)
|||+++|+|.+++.... .....+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~ 181 (327)
T 1fvr_A 105 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQK---QFIHRDLAARNILVGENYVA 181 (327)
T ss_dssp ECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECGGGCE
T ss_pred EecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCccceEEEcCCCeE
Confidence 99999999999998653 1223589999999999999999999999 99999999999999999999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
||+||-
T Consensus 182 kL~Dfg 187 (327)
T 1fvr_A 182 KIADFG 187 (327)
T ss_dssp EECCTT
T ss_pred EEcccC
Confidence 999995
No 112
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=99.92 E-value=2.6e-25 Score=214.92 Aligned_cols=143 Identities=25% Similarity=0.421 Sum_probs=122.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcE----EEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKL----VAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~----vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||+||+|+.. +++. ||+|.+...........+.+|+.+++.++||||+++++++. .+..++
T Consensus 13 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~ 91 (325)
T 3kex_A 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQL 91 (325)
T ss_dssp TTEEEEEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEE
T ss_pred hHceeeeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEE
Confidence 46777899999999999999864 4443 78888754433333446789999999999999999999886 466899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 92 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 160 (325)
T 3kex_A 92 VTQYLPLGSLLDHVRQHRG---ALGPQLLLNWGVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFG 160 (325)
T ss_dssp EEECCTTCBSHHHHHSSGG---GSCTTHHHHHHHHHHHHHHHHHHT---TCCCSCCSSTTEEESSSSCEEECSCS
T ss_pred EEEeCCCCCHHHHHHHccc---cCCHHHHHHHHHHHHHHHHHHHhC---CCCCCccchheEEECCCCeEEECCCC
Confidence 9999999999999976422 388999999999999999999999 99999999999999999999999995
No 113
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=99.92 E-value=8.3e-25 Score=210.67 Aligned_cols=140 Identities=29% Similarity=0.431 Sum_probs=124.3
Q ss_pred CCCCCccccCCCceEEEEEeC-----CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC--CceEE
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-----DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV--TEKLL 369 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~--~~~~l 369 (447)
|+..+.||+|+||.||++.+. +++.||||+++..........+.+|+++++.++||||+++++++... ...++
T Consensus 33 ~~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~l 112 (318)
T 3lxp_A 33 LKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQL 112 (318)
T ss_dssp EEEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEE
T ss_pred HhhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEE
Confidence 377899999999999988642 57899999997654334455799999999999999999999999874 56899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++.... +++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 113 v~e~~~~~~L~~~l~~~~-----~~~~~~~~i~~~l~~~l~~LH~~---~ivH~Dikp~Nil~~~~~~~kl~Dfg 179 (318)
T 3lxp_A 113 VMEYVPLGSLRDYLPRHS-----IGLAQLLLFAQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVKIGDFG 179 (318)
T ss_dssp EECCCTTCBHHHHGGGSC-----CCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCGG
T ss_pred EEecccCCcHHHHHhhCC-----CCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEEcCCCCEEECCcc
Confidence 999999999999997642 88999999999999999999999 99999999999999999999999995
No 114
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=99.92 E-value=6.6e-25 Score=210.37 Aligned_cols=143 Identities=23% Similarity=0.347 Sum_probs=127.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+|+.. +++.||||++....... ....+.+|++++..++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (311)
T 4agu_A 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFE 82 (311)
T ss_dssp CCEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred ccceEeeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEE
Confidence 56888899999999999999975 58999999986543222 23468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 83 ~~~~~~l~~~~~~~~----~~~~~~~~~i~~~l~~~l~~lH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 147 (311)
T 4agu_A 83 YCDHTVLHELDRYQR----GVPEHLVKSITWQTLQAVNFCHKH---NCIHRDVKPENILITKHSVIKLCDFG 147 (311)
T ss_dssp CCSEEHHHHHHHTSS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred eCCCchHHHHHhhhc----CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCCChhhEEEcCCCCEEEeeCC
Confidence 999999998886543 388999999999999999999999 99999999999999999999999995
No 115
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=2.2e-25 Score=218.11 Aligned_cols=143 Identities=27% Similarity=0.331 Sum_probs=126.7
Q ss_pred cCCCCCCccccCCCceEEEEEe----CCCcEEEEEEcccccc---cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCc
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL----ADGKLVAVKRLKEERT---SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~----~~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~ 366 (447)
++|++.+.||+|+||.||+|+. .+++.||||+++.... ......+.+|++++..+ +||||+++++++...+.
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 133 (355)
T 1vzo_A 54 ENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETK 133 (355)
T ss_dssp GGEEEEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTE
T ss_pred cceEEEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCce
Confidence 5688889999999999999986 3689999999865421 12234577899999999 69999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 134 ~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DfG 204 (355)
T 1vzo_A 134 LHLILDYINGGELFTHLSQRE----RFTEHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHVVLTDFG 204 (355)
T ss_dssp EEEEECCCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEESCSS
T ss_pred EEEEeecCCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEECCCCcEEEeeCC
Confidence 999999999999999998753 388999999999999999999999 99999999999999999999999995
No 116
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=99.92 E-value=3.1e-25 Score=215.29 Aligned_cols=145 Identities=26% Similarity=0.302 Sum_probs=127.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTV 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 364 (447)
..++|+..+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~ 101 (335)
T 3dls_A 22 YSQKYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQ 101 (335)
T ss_dssp HHHHEEEEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECS
T ss_pred cccceEEEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeC
Confidence 346789999999999999999985 468999999986543211 223578899999999999999999999999
Q ss_pred CceEEEeecCCCC-ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 365 TEKLLVYPYMTNG-SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 365 ~~~~lv~e~~~~g-sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
+..++||||+.+| +|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||
T Consensus 102 ~~~~lv~e~~~~g~~l~~~~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~Df 174 (335)
T 3dls_A 102 GFFQLVMEKHGSGLDLFAFIDRHP----RLDEPLASYIFRQLVSAVGYLRLK---DIIHRDIKDENIVIAEDFTIKLIDF 174 (335)
T ss_dssp SEEEEEEECCTTSCBHHHHHHTCC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCC
T ss_pred CEEEEEEEeCCCCccHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEEeccCHHHEEEcCCCcEEEeec
Confidence 9999999999777 9999987653 389999999999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 175 g 175 (335)
T 3dls_A 175 G 175 (335)
T ss_dssp T
T ss_pred c
Confidence 5
No 117
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=99.92 E-value=7.8e-25 Score=206.43 Aligned_cols=144 Identities=28% Similarity=0.464 Sum_probs=128.2
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+. .+++.||||.+..... ......+.+|+.++..++||||+++++++...+..++||
T Consensus 11 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (278)
T 3cok_A 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVL 90 (278)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccceeeeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEE
Confidence 5688889999999999999996 4689999999864321 222457899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 91 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nili~~~~~~kl~dfg 157 (278)
T 3cok_A 91 EMCHNGEMNRYLKNRV---KPFSENEARHFMHQIITGMLYLHSH---GILHRDLTLSNLLLTRNMNIKIADFG 157 (278)
T ss_dssp ECCTTEEHHHHHHTCS---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSSCCGGGEEECTTCCEEECCCT
T ss_pred ecCCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHEEEcCCCCEEEEeec
Confidence 9999999999997643 2489999999999999999999999 99999999999999999999999995
No 118
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=99.92 E-value=3.9e-25 Score=209.64 Aligned_cols=144 Identities=26% Similarity=0.397 Sum_probs=126.3
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC-C-------cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD-G-------KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~-~-------~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
.++|...+.||+|+||.||+|+... + ..||+|.++... ......+.+|+.+++.++||||+++++++...+
T Consensus 7 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~ 85 (289)
T 4fvq_A 7 NEDLIFNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAH-RNYSESFFEAASMMSKLSHKHLVLNYGVCVCGD 85 (289)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGG-GGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTT
T ss_pred hhHeeeeeeeccCCCceEEEEEEecccccccccchhhhhhhccccc-HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCC
Confidence 3567778999999999999998543 3 479999986543 234457999999999999999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc--------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-------- 437 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-------- 437 (447)
..++||||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.
T Consensus 86 ~~~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 159 (289)
T 4fvq_A 86 ENILVQEFVKFGSLDTYLKKNKN---CINILWKLEVAKQLAAAMHFLEEN---TLIHGNVCAKNILLIREEDRKTGNPPF 159 (289)
T ss_dssp CCEEEEECCTTCBHHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEEECCBGGGTBCCE
T ss_pred CCEEEEECCCCCCHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHhhC---CeECCCcCcceEEEecCCcccccccce
Confidence 99999999999999999986532 378999999999999999999999 9999999999999999987
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+|++||-
T Consensus 160 ~kl~Dfg 166 (289)
T 4fvq_A 160 IKLSDPG 166 (289)
T ss_dssp EEECCCC
T ss_pred eeeccCc
Confidence 9999985
No 119
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=99.92 E-value=4.4e-25 Score=216.29 Aligned_cols=144 Identities=26% Similarity=0.349 Sum_probs=129.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|+..+.||+|+||.||+|+.. +++.||+|+++..........+.+|+.++..++||||+++++++...+..++||||
T Consensus 33 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 112 (360)
T 3eqc_A 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 112 (360)
T ss_dssp GGEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECC
T ss_pred ccceeeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEEC
Confidence 56888899999999999999965 68999999997654333445789999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++|+|.+++.... .+++..+..++.|++.||+|||+.+ +|+||||||+|||++.++.+||+||-
T Consensus 113 ~~~~~L~~~l~~~~----~~~~~~~~~i~~~i~~~l~~lh~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 177 (360)
T 3eqc_A 113 MDGGSLDQVLKKAG----RIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFG 177 (360)
T ss_dssp CTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHHH--CCCCSCCSGGGEEECTTCCEEECCCC
T ss_pred CCCCCHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHhC--CEEcCCccHHHEEECCCCCEEEEECC
Confidence 99999999998754 2889999999999999999999831 79999999999999999999999995
No 120
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=99.92 E-value=3.9e-25 Score=217.75 Aligned_cols=142 Identities=33% Similarity=0.491 Sum_probs=122.0
Q ss_pred CCCCCccccCCCceEEEEEeC--CC--cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCceEEEe
Q 013258 297 FSNKNILGRGGFGKVYKGRLA--DG--KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLLVY 371 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~lv~ 371 (447)
|...+.||+|+||+||+|+.. ++ ..||||.++.........++.+|+.+++.++||||+++++++.. .+..++||
T Consensus 91 ~~~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~ 170 (373)
T 3c1x_A 91 VHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVL 170 (373)
T ss_dssp EEEEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEE
T ss_pred eecCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEE
Confidence 455688999999999999853 22 46899998754444445679999999999999999999998765 45789999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.++++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 171 e~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~~~kL~DFG 237 (373)
T 3c1x_A 171 PYMKHGDLRNFIRNETH---NPTVKDLIGFGLQVAKGMKFLASK---KFVHRDLAARNCMLDEKFTVKVADFG 237 (373)
T ss_dssp ECCTTCBHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECCC-
T ss_pred ECCCCCCHHHHHhhccc---CCCHHHHHHHHHHHHHHHHHHHHC---CEecCccchheEEECCCCCEEEeecc
Confidence 99999999999976432 378899999999999999999999 99999999999999999999999995
No 121
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=99.92 E-value=7.6e-25 Score=211.17 Aligned_cols=144 Identities=24% Similarity=0.333 Sum_probs=128.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-----cHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|++.+.||+|+||.||+|+.. +|+.||||.++...... ...++.+|+.++..++||||+++++++...+..
T Consensus 11 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 90 (321)
T 2a2a_A 11 EDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDV 90 (321)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEE
T ss_pred hccEEEeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence 356888899999999999999965 58999999986543221 245799999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC----ceeeccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTI 443 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~~i~df 443 (447)
++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++++++ .+||+||
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivH~dikp~NIl~~~~~~~~~~~kl~Df 163 (321)
T 2a2a_A 91 VLILELVSGGELFDFLAQKE----SLSEEEATSFIKQILDGVNYLHTK---KIAHFDLKPENIMLLDKNIPIPHIKLIDF 163 (321)
T ss_dssp EEEECCCCSCBHHHHHHTCS----CEEHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESCTTSSSCCEEECCC
T ss_pred EEEEEcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCChHHEEEecCCCCcCCEEEccC
Confidence 99999999999999997643 388999999999999999999999 999999999999999988 7999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 164 g 164 (321)
T 2a2a_A 164 G 164 (321)
T ss_dssp T
T ss_pred c
Confidence 5
No 122
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=99.92 E-value=2.2e-25 Score=215.25 Aligned_cols=143 Identities=26% Similarity=0.440 Sum_probs=123.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
++|...+.||+|+||.||+|+.. +++.||||+++..........+.+|+++++.++||||+++++++...+..++||||
T Consensus 2 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 81 (324)
T 3mtl_A 2 ETYIKLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 81 (324)
T ss_dssp CSEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEEC
T ss_pred CceEEEEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecc
Confidence 46788899999999999999975 68999999996544332223466899999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++ |+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 82 ~~-~~l~~~~~~~~~---~~~~~~~~~~~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 145 (324)
T 3mtl_A 82 LD-KDLKQYLDDCGN---IINMHNVKLFLFQLLRGLAYCHRQ---KVLHRDLKPQNLLINERGELKLADFG 145 (324)
T ss_dssp CS-EEHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEEESSCCGGGEEECTTCCEEECSSS
T ss_pred cc-cCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCcCHHHEEECCCCCEEEccCc
Confidence 97 599998876532 488999999999999999999999 99999999999999999999999995
No 123
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=99.91 E-value=9.5e-25 Score=215.83 Aligned_cols=144 Identities=20% Similarity=0.308 Sum_probs=126.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|... +++.||+|.+.... ......+.+|+.++..++||||+++++++......++|||
T Consensus 50 ~~~y~i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~-~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E 128 (387)
T 1kob_A 50 YDYYDILEELGSGAFGVVHRCVEKATGRVFVAKFINTPY-PLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILE 128 (387)
T ss_dssp GGTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS-HHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEE
T ss_pred ccceEEEEEEecCCCEEEEEEEECCCCCEEEEEEecccc-hhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEE
Confidence 357888899999999999999965 68999999986432 2233468999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC--CCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--DADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--~~~~~i~df~ 444 (447)
|+++|+|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+||-
T Consensus 129 ~~~gg~L~~~l~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~---givHrDlkp~NIll~~~~~~~vkL~DFG 196 (387)
T 1kob_A 129 FLSGGELFDRIAAED---YKMSEAEVINYMRQACEGLKHMHEH---SIVHLDIKPENIMCETKKASSVKIIDFG 196 (387)
T ss_dssp CCCCCBHHHHTTCTT---CCBCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSTTCCCEEECCCT
T ss_pred cCCCCcHHHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeecccchHHeEEecCCCCceEEEecc
Confidence 999999999987543 2489999999999999999999999 9999999999999985 4679999995
No 124
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=99.91 E-value=2e-25 Score=214.38 Aligned_cols=157 Identities=28% Similarity=0.397 Sum_probs=133.1
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccce
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRL 357 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l 357 (447)
+...+.....++|.+.+.||+|+||.||+|+. .+++.||||+++..........+.+|+.++..+ +||||+++
T Consensus 17 ~~~~~~~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~ 96 (316)
T 2xir_A 17 YDASKWEFPRDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNL 96 (316)
T ss_dssp CCHHHHBCCGGGEEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCE
T ss_pred ccccceecchhheeeeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeE
Confidence 44455556678899999999999999999974 246899999997654433445789999999999 79999999
Q ss_pred eeEEecCC-ceEEEeecCCCCChhhHhhccCCC------------CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecC
Q 013258 358 YGFCTTVT-EKLLVYPYMTNGSVASRLRERQSS------------LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRD 424 (447)
Q Consensus 358 ~~~~~~~~-~~~lv~e~~~~gsL~~~l~~~~~~------------~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrD 424 (447)
++++...+ ..++||||+++|+|.+++...... ...+++..+..++.|+++||+|||+. +|+|||
T Consensus 97 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~---~i~H~d 173 (316)
T 2xir_A 97 LGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRD 173 (316)
T ss_dssp EEEECCTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHT---TCCCSC
T ss_pred EEEEecCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhC---Cccccc
Confidence 99988755 489999999999999999875421 12278899999999999999999999 999999
Q ss_pred CCCCceeeCCCCceeecccc
Q 013258 425 VKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 425 lkp~NILl~~~~~~~i~df~ 444 (447)
|||+||++++++.+||+||-
T Consensus 174 ikp~Nil~~~~~~~kl~Dfg 193 (316)
T 2xir_A 174 LAARNILLSEKNVVKICDFG 193 (316)
T ss_dssp CSGGGEEECGGGCEEECCCG
T ss_pred CccceEEECCCCCEEECCCc
Confidence 99999999999999999995
No 125
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=99.91 E-value=9.3e-25 Score=214.06 Aligned_cols=153 Identities=22% Similarity=0.333 Sum_probs=132.4
Q ss_pred ccHHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc----------HHHHHHHHHHHhcCCCCCc
Q 013258 285 FSLRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG----------ELQFQTEVKIISMAVHRNL 354 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------~~~~~~E~~~l~~l~H~ni 354 (447)
....++....++|...+.||+|+||.||+|...+|+.||||++........ ...+.+|++++..++||||
T Consensus 12 ~~~~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i 91 (362)
T 3pg1_A 12 DLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNI 91 (362)
T ss_dssp HHHHHHHHTTCSCEEEEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTB
T ss_pred HHHHHHHHhccceEEeEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCc
Confidence 346677888899999999999999999999988899999999865432211 2568999999999999999
Q ss_pred cceeeEEec-----CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 355 LRLYGFCTT-----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 355 v~l~~~~~~-----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
+++++++.. ....++||||+. |+|.+.+.... ..+++..+..++.|++.||+|||+. +|+||||||+|
T Consensus 92 v~~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~N 164 (362)
T 3pg1_A 92 LGLRDIFVHFEEPAMHKLYLVTELMR-TDLAQVIHDQR---IVISPQHIQYFMYHILLGLHVLHEA---GVVHRDLHPGN 164 (362)
T ss_dssp CCCSEEEEECCTTTCCEEEEEEECCS-EEHHHHHHCTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGG
T ss_pred cceeeeEEeccCCCcceEEEEEccCC-CCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHC---cCEecCCChHH
Confidence 999999854 335799999998 68888887543 2489999999999999999999999 99999999999
Q ss_pred eeeCCCCceeecccc
Q 013258 430 ILLDEDADQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~~~~i~df~ 444 (447)
||++.++.+||+||-
T Consensus 165 Il~~~~~~~kl~Dfg 179 (362)
T 3pg1_A 165 ILLADNNDITICDFN 179 (362)
T ss_dssp EEECTTCCEEECCTT
T ss_pred EEEcCCCCEEEEecC
Confidence 999999999999995
No 126
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=99.91 E-value=3.6e-25 Score=211.14 Aligned_cols=137 Identities=28% Similarity=0.411 Sum_probs=113.7
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecCC----ceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTVT----EKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~----~~~ 368 (447)
++|.+.+.||+|+||.||+|+.. ++.||||+++.. ....+.+|.+++.. ++||||+++++++.... ..+
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~ 77 (303)
T 3gxj_A 3 RTIVLQESIGKGRFGEVWRGKWR-GEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLW 77 (303)
T ss_dssp GGCCCCEEEEECSSSEEEEC-CT-TSCEEEEECC-T----THHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEE
T ss_pred ceeeehhhccCCCCeEEEEEEEc-CcceEEEEeccc----chhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeE
Confidence 57889999999999999999874 889999998542 33467788888877 79999999999998766 789
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh--------cCCCCCeeecCCCCCceeeCCCCceee
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
+||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||++.++.+||
T Consensus 78 lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~Nil~~~~~~~kl 149 (303)
T 3gxj_A 78 LVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNGTCCI 149 (303)
T ss_dssp EEEECCTTCCHHHHHHHC-----CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC----CCCSCCCGGGC-CCTTCCC-B
T ss_pred EEEeccCCCCHHHHHhcc-----CcchHHHHHHHHHHHHHHHHHHHHHhhhccCC---CEeeCcCCHHHeEECCCCCEEE
Confidence 999999999999999764 2788899999999999999999 66 9999999999999999999999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||-
T Consensus 150 ~DFg 153 (303)
T 3gxj_A 150 ADLG 153 (303)
T ss_dssp CCCC
T ss_pred eecC
Confidence 9995
No 127
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=99.91 E-value=1.8e-24 Score=204.91 Aligned_cols=142 Identities=31% Similarity=0.592 Sum_probs=123.0
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccH------HHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGE------LQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~------~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
++|+..+.||+|+||.||+|+.. +++.||||.+......... ..+.+|+.++..++||||+++++++.+..
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-- 96 (287)
T 4f0f_A 19 NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP-- 96 (287)
T ss_dssp TTEEEEEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--
T ss_pred ccceehhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--
Confidence 56777899999999999999964 6899999998654322221 56899999999999999999999987654
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC--eeecCCCCCceeeCCCCc-----eee
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDAD-----QSS 440 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~-----~~i 440 (447)
++||||+++|+|.+.+..... .+++..+..++.|++.||+|||++ + |+||||||+|||++.++. +||
T Consensus 97 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~lH~~---~~~ivH~dikp~Nil~~~~~~~~~~~~kl 170 (287)
T 4f0f_A 97 RMVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDIALGIEYMQNQ---NPPIVHRDLRSPNIFLQSLDENAPVCAKV 170 (287)
T ss_dssp EEEEECCTTCBHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCSCCSGGGEEESCCCTTCSCCEEE
T ss_pred eEEEEecCCCCHHHHHhcccC---CccHHHHHHHHHHHHHHHHHHHhC---CCCeecCCCCcceEEEeccCCCCceeEEe
Confidence 799999999999998876432 489999999999999999999998 7 999999999999998887 999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||-
T Consensus 171 ~Dfg 174 (287)
T 4f0f_A 171 ADFG 174 (287)
T ss_dssp CCCT
T ss_pred CCCC
Confidence 9995
No 128
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=99.91 E-value=8.8e-25 Score=207.86 Aligned_cols=143 Identities=22% Similarity=0.332 Sum_probs=127.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|...+.||+|+||.||+++.. +++.||+|.+...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 15 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 94 (294)
T 2rku_A 15 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 94 (294)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred cceEEEEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEE
Confidence 45777899999999999999975 5889999998654322 23446889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+||-
T Consensus 95 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 160 (294)
T 2rku_A 95 ELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 160 (294)
T ss_dssp ECCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEcCCCCEEEEecc
Confidence 9999999999987653 388999999999999999999999 99999999999999999999999995
No 129
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=99.91 E-value=5.4e-25 Score=211.57 Aligned_cols=147 Identities=26% Similarity=0.371 Sum_probs=126.1
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe----cCCceE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT----TVTEKL 368 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----~~~~~~ 368 (447)
.++|+..+.||+|+||.||+++. .+++.||||++.... ......+.+|+++++.++||||+++++++. .....+
T Consensus 28 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 106 (317)
T 2buj_A 28 NKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHE-QQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAW 106 (317)
T ss_dssp TEEEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEE
T ss_pred CeEEEEEEEecCCCCeEEEEEEecCCCcEEEEEEEecCC-HHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeE
Confidence 45788889999999999999996 568999999985432 233456899999999999999999999987 334689
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.+++.........+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 107 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~dfg 179 (317)
T 2buj_A 107 LLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---GYAHRDLKPTNILLGDEGQPVLMDLG 179 (317)
T ss_dssp EEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTSCEEECCCS
T ss_pred EEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEcCCCCEEEEecC
Confidence 99999999999999987433334589999999999999999999999 99999999999999999999999996
No 130
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=99.91 E-value=2.8e-25 Score=228.96 Aligned_cols=144 Identities=27% Similarity=0.420 Sum_probs=127.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
..++|++.+.||+|+||.||+|++.++..||||+++... ....+|.+|+++|+.++||||+++++++.. +..++|||
T Consensus 265 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e 341 (535)
T 2h8h_A 265 PRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT--MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTE 341 (535)
T ss_dssp CGGGEEEEEEEEECSSEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEEC
T ss_pred chhhhhhheecccCCCeEEEEEEECCCceEEEEEeCCCC--CCHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeee
Confidence 445677889999999999999999888889999997543 234579999999999999999999999876 67899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.++++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 342 ~~~~gsL~~~l~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 408 (535)
T 2h8h_A 342 YMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFG 408 (535)
T ss_dssp CCTTEEHHHHHSHHHH--TTCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECGGGCEEECCTT
T ss_pred hhcCCcHHHHHhhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCCCHhhEEEcCCCcEEEcccc
Confidence 9999999999975321 2388999999999999999999999 99999999999999999999999995
No 131
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=99.91 E-value=2.3e-25 Score=210.17 Aligned_cols=143 Identities=29% Similarity=0.421 Sum_probs=126.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.++|+..+.||+|+||.||+|+..+++.||||.++... .....+.+|+++++.++||||+++++++. .+..++||||
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~ 88 (279)
T 1qpc_A 12 RETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGS--MSPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEY 88 (279)
T ss_dssp GGGEEEEEEEEEETTEEEEEEEETTTEEEEEEEECTTS--SCHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEEC
T ss_pred HHhhhheeeecCCCCeEEEEEEEcCCcEEEEEEecCCc--ccHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEec
Confidence 45677889999999999999998888899999986543 23457999999999999999999999876 4568999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+||-
T Consensus 89 ~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 154 (279)
T 1qpc_A 89 MENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIHRDLRAANILVSDTLSCKIADFG 154 (279)
T ss_dssp CTTCBHHHHTTSHHH--HTCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTSCEEECCCT
T ss_pred CCCCCHHHHHhcCCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHhhEEEcCCCCEEECCCc
Confidence 999999999975321 1388999999999999999999999 99999999999999999999999995
No 132
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=99.91 E-value=1.2e-24 Score=205.03 Aligned_cols=143 Identities=22% Similarity=0.326 Sum_probs=128.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|+.. ++..||+|.+..... .....+.+|+++++.++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (277)
T 3f3z_A 8 NQYYTLENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFV-EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVME 86 (277)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGC-SCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hhhEEeeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhcc-chHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEe
Confidence 356888899999999999999965 478999999865432 345579999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
|+++++|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.++|+||-
T Consensus 87 ~~~~~~L~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg 154 (277)
T 3f3z_A 87 LCTGGELFERVVHKR----VFRESDAARIMKDVLSAVAYCHKL---NVAHRDLKPENFLFLTDSPDSPLKLIDFG 154 (277)
T ss_dssp CCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred ccCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEecCCCCCcEEEEecc
Confidence 999999999987654 388999999999999999999999 99999999999999 788999999995
No 133
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=99.91 E-value=5.7e-25 Score=208.36 Aligned_cols=145 Identities=28% Similarity=0.397 Sum_probs=129.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
..++|+..+.||+|+||.||+|+.. ++..||+|.++... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 11 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 88 (288)
T 3kfa_A 11 ERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT--MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIT 88 (288)
T ss_dssp CGGGEEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCS--THHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEE
T ss_pred cccceeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCH--HHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEE
Confidence 3456788899999999999999975 48899999986532 33457999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 89 e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~l~Dfg 156 (288)
T 3kfa_A 89 EFMTYGNLLDYLRECNR--QEVSAVVLLYMATQISSAMEYLEKK---NFIHRDLAARNCLVGENHLVKVADFG 156 (288)
T ss_dssp ECCTTEEHHHHHHHCCT--TTSCHHHHHHHHHHHHHHHHHHHHH---TCCCSCCSGGGEEECGGGCEEECCCC
T ss_pred EcCCCCcHHHHHHhccc--CCccHhHHHHHHHHHHHHHHHHHHC---CccCCCCCcceEEEcCCCCEEEccCc
Confidence 99999999999987432 3488999999999999999999999 99999999999999999999999995
No 134
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=99.91 E-value=8.7e-25 Score=212.14 Aligned_cols=143 Identities=22% Similarity=0.332 Sum_probs=127.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|...+.||+|+||.||+++.. +++.||+|++...... .....+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 41 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 120 (335)
T 2owb_A 41 RRYVRGRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVL 120 (335)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEE
Confidence 45777899999999999999975 4889999998654322 23446889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 121 e~~~~~~L~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 186 (335)
T 2owb_A 121 ELCRRRSLLELHKRRK----ALTEPEARYYLRQIVLGCQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFG 186 (335)
T ss_dssp CCCTTCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCEecCCCchhEEEcCCCCEEEeecc
Confidence 9999999999987653 389999999999999999999999 99999999999999999999999995
No 135
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=99.91 E-value=6.9e-25 Score=229.42 Aligned_cols=136 Identities=24% Similarity=0.353 Sum_probs=121.8
Q ss_pred ccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 302 ILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 302 ~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
.||+|+||.||+|.+. ++..||||+++.........+|.+|+++++.++|||||++++++.. +..++||||+++|+
T Consensus 343 ~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g~ 421 (613)
T 2ozo_A 343 ELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGGP 421 (613)
T ss_dssp EEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTCB
T ss_pred EEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCCc
Confidence 6999999999999863 4667999999766544456689999999999999999999999876 56899999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 422 L~~~l~~~~---~~l~~~~~~~i~~qi~~~L~~LH~~---~iiHrDlkp~NILl~~~~~vkL~DFG 481 (613)
T 2ozo_A 422 LHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRNLAARNVLLVNRHYAKISDFG 481 (613)
T ss_dssp HHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCS
T ss_pred HHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CEEcCcCCHHHEEEcCCCcEEEeecc
Confidence 999997543 2489999999999999999999999 99999999999999999999999995
No 136
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=99.91 E-value=8.1e-25 Score=208.45 Aligned_cols=144 Identities=33% Similarity=0.451 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec-CCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT-VTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~-~~~~~l 369 (447)
..|+..+.||+|+||.||+|+..+ ...+|+|.++..........+.+|+.++++++||||+++++++.. .+..++
T Consensus 25 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 104 (298)
T 3f66_A 25 LIVHFNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLV 104 (298)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEE
T ss_pred eehhhcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEE
Confidence 356777999999999999998642 236899998764443444578999999999999999999998654 567899
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 105 v~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~ql~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 173 (298)
T 3f66_A 105 VLPYMKHGDLRNFIRNET---HNPTVKDLIGFGLQVAKGMKYLASK---KFVHRDLAARNCMLDEKFTVKVADFG 173 (298)
T ss_dssp EEECCTTCBHHHHHHCTT---CCCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECSCG
T ss_pred EEeCCCCCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCchheEEECCCCCEEECccc
Confidence 999999999999997643 2478999999999999999999999 99999999999999999999999995
No 137
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=99.91 E-value=1.8e-24 Score=207.35 Aligned_cols=142 Identities=30% Similarity=0.418 Sum_probs=123.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|...+.||+|+||.||+|+.. ..+|+|+++..... .....+.+|+++++.++||||+++++++. .+..++|||
T Consensus 35 ~~~~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e 111 (307)
T 3lb7_A 35 ASEVMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQ 111 (307)
T ss_dssp TTSCCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred ccceEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEe
Confidence 467888899999999999999864 46899998754322 22346899999999999999999999865 456899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 112 ~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~DFg 177 (307)
T 3lb7_A 112 WCEGSSLYKHLHVQET---KFQMFQLIDIARQTAQGMDYLHAK---NIIHRDMKSNNIFLHEGLTVKIGDFG 177 (307)
T ss_dssp CCSSCBHHHHHHTSCC---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCSSSEEECTTSCEEECCCC
T ss_pred cCCCCcHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeeCCCChhhEEEcCCCCEEEccCC
Confidence 9999999999975432 489999999999999999999999 99999999999999999999999995
No 138
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=99.91 E-value=7.6e-25 Score=212.03 Aligned_cols=140 Identities=19% Similarity=0.256 Sum_probs=124.6
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|++.+.||+|+||+||+|+. .+++.||||.++.... ...+.+|+++++.+ +||||+++++++...+..++|||
T Consensus 9 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e 85 (330)
T 2izr_A 9 PNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR---APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLE 85 (330)
T ss_dssp TTEEEEEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS---SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEE
T ss_pred CCeEEEEEeeccCCceEEEEEECCCCcEEEEEEeccccc---hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEE
Confidence 5688889999999999999995 5689999999864422 23588999999999 99999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc-----eeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-----QSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~~i~df~ 444 (447)
|+ +++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++. +||+||-
T Consensus 86 ~~-~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg 155 (330)
T 2izr_A 86 LL-GPSLEDLFDLCD---RTFSLKTVLMIAIQLISRMEYVHSK---NLIYRDVKPENFLIGRPGNKTQQVIHIIDFA 155 (330)
T ss_dssp CC-CCBHHHHHHHTT---TCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTCTTSEEECCCT
T ss_pred eC-CCCHHHHHHHcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CeeccCCCHHHeeeccCCCCCCceEEEEEcc
Confidence 99 999999998642 2489999999999999999999999 9999999999999999987 9999995
No 139
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=99.91 E-value=1.3e-24 Score=207.51 Aligned_cols=142 Identities=31% Similarity=0.462 Sum_probs=128.7
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
+.|+..+.||+|+||.||+|+.. +++.||||+++..........+.+|+.++..++||||+++++++...+..++||||
T Consensus 22 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 101 (303)
T 3a7i_A 22 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 101 (303)
T ss_dssp GTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred HHHHHhhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEe
Confidence 45777899999999999999864 68999999997654444556799999999999999999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+++++|.+++... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||.
T Consensus 102 ~~~~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg 164 (303)
T 3a7i_A 102 LGGGSALDLLEPG-----PLDETQIATILREILKGLDYLHSE---KKIHRDIKAANVLLSEHGEVKLADFG 164 (303)
T ss_dssp CTTEEHHHHHTTS-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred CCCCcHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChheEEECCCCCEEEeecc
Confidence 9999999998642 389999999999999999999999 99999999999999999999999995
No 140
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=99.91 E-value=1.3e-24 Score=205.33 Aligned_cols=143 Identities=27% Similarity=0.349 Sum_probs=127.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-----ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-----GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-----~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|...+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|+.++..++||||+++++++...+..+
T Consensus 5 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T 3bhy_A 5 DHYEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVV 84 (283)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEE
T ss_pred hhhhhHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEE
Confidence 46788899999999999999975 5899999998654321 12457999999999999999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC----ceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA----DQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~----~~~i~df~ 444 (447)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||++++++ .+||+||-
T Consensus 85 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg 157 (283)
T 3bhy_A 85 LILELVSGGELFDFLAEKE----SLTEDEATQFLKQILDGVHYLHSK---RIAHFDLKPENIMLLDKNVPNPRIKLIDFG 157 (283)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSSSSCCEEECCCT
T ss_pred EEEeecCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChHHEEEecCCCCCCceEEEecc
Confidence 9999999999999997653 389999999999999999999999 999999999999999887 79999995
No 141
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=99.91 E-value=1e-24 Score=205.38 Aligned_cols=143 Identities=24% Similarity=0.405 Sum_probs=128.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|.+.+.||+|+||.||+|+.. +++.||||.++... .......+.+|+.+++.++||||+++++++...+..++||
T Consensus 11 ~~y~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 90 (276)
T 2h6d_A 11 GHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVM 90 (276)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred ccEEEEeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEE
Confidence 56888899999999999999975 68999999986432 2233457899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+|++||-
T Consensus 91 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~l~dfg 156 (276)
T 2h6d_A 91 EYVSGGELFDYICKHG----RVEEMEARRLFQQILSAVDYCHRH---MVVHRDLKPENVLLDAHMNAKIADFG 156 (276)
T ss_dssp ECCCSCBHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---CSSCCCCCGGGEEECTTSCEEECCCC
T ss_pred eccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCChhhEEECCCCCEEEeecc
Confidence 9999999999997653 388999999999999999999999 99999999999999999999999985
No 142
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=99.91 E-value=7e-25 Score=209.13 Aligned_cols=151 Identities=28% Similarity=0.376 Sum_probs=115.4
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
....++|.+.+.||+|+||.||+|+.. +++.||||.+..........++.+|+.++..++||||+++++++...+..++
T Consensus 11 ~i~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 90 (303)
T 2vwi_A 11 SINRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWL 90 (303)
T ss_dssp --CCCCCEEEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEE
T ss_pred ccchhhhhhhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEE
Confidence 344578899999999999999999854 6899999998655433444578899999999999999999999999999999
Q ss_pred EeecCCCCChhhHhhcc----CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRER----QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~----~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++|+|.+++... ......+++..+..++.|++.||+|||+. +|+||||||+||++++++.+||+||.
T Consensus 91 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 166 (303)
T 2vwi_A 91 VMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN---GQIHRDVKAGNILLGEDGSVQIADFG 166 (303)
T ss_dssp EEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECCCH
T ss_pred EehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhC---CCCCCCCChhhEEEcCCCCEEEEecc
Confidence 99999999999998742 11123489999999999999999999999 99999999999999999999999994
No 143
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.1e-24 Score=207.47 Aligned_cols=142 Identities=27% Similarity=0.389 Sum_probs=122.8
Q ss_pred CCCCCccccCCCceEEEEEeC-CC---cEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce-EEEe
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DG---KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK-LLVY 371 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~---~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~-~lv~ 371 (447)
|...+.||+|+||.||+|+.. ++ ..||+|.++..........+.+|+.+++.++||||+++++++...+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 444588999999999999853 23 379999987544333445789999999999999999999999876665 9999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+.+|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 103 e~~~~~~L~~~~~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 169 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQ---RNPTVKDLISFGLQVARGMEYLAEQ---KFVHRDLAARNCMLDESFTVKVADFG 169 (298)
T ss_dssp CCCTTCBHHHHHHCTT---CCCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTCCEEECCTT
T ss_pred ecccCCCHHHHHhccc---cCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCcEEeCcCC
Confidence 9999999999997643 2478999999999999999999999 99999999999999999999999995
No 144
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=99.91 E-value=1e-24 Score=218.14 Aligned_cols=144 Identities=24% Similarity=0.336 Sum_probs=122.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-------ccHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-------GGELQFQTEVKIISMAVHRNLLRLYGFCTTV 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-------~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 364 (447)
..++|...+.||+|+||+||+|... +++.||||++...... .....+.+|+.++++++||||+++++++..
T Consensus 133 ~~~~y~~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~~- 211 (419)
T 3i6u_A 133 LRDEYIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDA- 211 (419)
T ss_dssp HHTTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEES-
T ss_pred hhccEEEEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEec-
Confidence 4578999999999999999999864 5899999998643211 112248899999999999999999999754
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeec
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSK 441 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~ 441 (447)
+..++||||+++|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++ .+||+
T Consensus 212 ~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivHrDlkp~NIll~~~~~~~~~kl~ 284 (419)
T 3i6u_A 212 EDYYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKIT 284 (419)
T ss_dssp SEEEEEEECCTTCBGGGGTSSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSSSCCEEEC
T ss_pred CceEEEEEcCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCCCcceEEEe
Confidence 55899999999999999887543 389999999999999999999999 999999999999997654 49999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 285 DFG 287 (419)
T 3i6u_A 285 DFG 287 (419)
T ss_dssp CSS
T ss_pred ecc
Confidence 995
No 145
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=8.9e-25 Score=207.17 Aligned_cols=142 Identities=23% Similarity=0.341 Sum_probs=123.5
Q ss_pred CCCCCC-ccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 296 GFSNKN-ILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~-~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+|.+.+ .||+|+||.||+|... ++..||||.++.........++.+|++++..++||||+++++++ ..+..++||
T Consensus 10 ~~~i~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~ 88 (287)
T 1u59_A 10 NLLIADIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVM 88 (287)
T ss_dssp GEEEEEEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEE
T ss_pred HhhhhhccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEE
Confidence 444444 8999999999999853 57889999997654334455799999999999999999999998 556789999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+||++++++.+||+||-
T Consensus 89 e~~~~~~L~~~l~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~Dfg 155 (287)
T 1u59_A 89 EMAGGGPLHKFLVGKR---EEIPVSNVAELLHQVSMGMKYLEEK---NFVHRDLAARNVLLVNRHYAKISDFG 155 (287)
T ss_dssp ECCTTEEHHHHHTTCT---TTSCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEEETTEEEECCCT
T ss_pred EeCCCCCHHHHHHhCC---ccCCHHHHHHHHHHHHHHHHHHHHC---CEeeCCCchheEEEcCCCCEEECccc
Confidence 9999999999997542 2489999999999999999999999 99999999999999999999999995
No 146
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.91 E-value=1.1e-24 Score=230.24 Aligned_cols=145 Identities=24% Similarity=0.316 Sum_probs=128.5
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~ 368 (447)
..++|+..+.||+|+||+||+|+.. +++.||||+++... .......+..|..++..+ +||||+++++++.+.+..+
T Consensus 339 ~~~~f~~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~ 418 (674)
T 3pfq_A 339 KLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLY 418 (674)
T ss_dssp -CTTEEEEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEE
T ss_pred cccceEEEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEE
Confidence 4567889999999999999999965 58899999996532 223344688899999887 7999999999999999999
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.++++... .+++..+..++.|++.||+|||++ +||||||||+|||+|+++.+||+||-
T Consensus 419 lV~E~~~gg~L~~~l~~~~----~~~~~~~~~~~~qi~~aL~~LH~~---gIiHrDLKp~NILl~~~g~ikL~DFG 487 (674)
T 3pfq_A 419 FVMEYVNGGDLMYHIQQVG----RFKEPHAVFYAAEIAIGLFFLQSK---GIIYRDLKLDNVMLDSEGHIKIADFG 487 (674)
T ss_dssp EEEECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---SEECCCCCSTTEEECSSSCEEECCCT
T ss_pred EEEeCcCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeEeccCChhhEEEcCCCcEEEeecc
Confidence 9999999999999998754 389999999999999999999999 99999999999999999999999995
No 147
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=99.91 E-value=1.3e-24 Score=205.50 Aligned_cols=144 Identities=22% Similarity=0.310 Sum_probs=127.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|++.+.||+|+||.||+|... +++.||+|++...... .....+.+|+.+++.++||||+++++++...+..++||
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 84 (284)
T 3kk8_A 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 84 (284)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhhhhhhhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEE
Confidence 467888899999999999999965 5899999998654322 22346889999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~df~ 444 (447)
||+++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||-
T Consensus 85 e~~~~~~l~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kl~Dfg 153 (284)
T 3kk8_A 85 DLVTGGELFEDIVARE----FYSEADASHCIQQILESIAYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFG 153 (284)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcCcCCCCHHHEEEecCCCCCcEEEeece
Confidence 9999999999887653 388999999999999999999999 9999999999999987765 9999995
No 148
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=99.91 E-value=1.5e-24 Score=208.04 Aligned_cols=144 Identities=23% Similarity=0.305 Sum_probs=129.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccccc--HHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGG--ELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~--~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|.+.+.||+|+||.||+|+.. +++.||+|+++....... ...+.+|+.++..++||||+++++++...+..++|
T Consensus 33 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv 112 (309)
T 2h34_A 33 FGPYRLRRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVD 112 (309)
T ss_dssp -CCEEEEEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEE
T ss_pred eccEEEEEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEE
Confidence 367888999999999999999965 689999999975433222 34689999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 113 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~NIl~~~~~~~kl~Dfg 179 (309)
T 2h34_A 113 MRLINGVDLAAMLRRQG----PLAPPRAVAIVRQIGSALDAAHAA---GATHRDVKPENILVSADDFAYLVDFG 179 (309)
T ss_dssp EECCCCEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECSCC
T ss_pred EEecCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---cCCcCCCChHHEEEcCCCCEEEecCc
Confidence 99999999999998753 388999999999999999999999 99999999999999999999999995
No 149
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=99.91 E-value=2.3e-24 Score=208.25 Aligned_cols=134 Identities=20% Similarity=0.324 Sum_probs=119.6
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeecCCCC
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
.+.||+|+||.||+|+.. +++.||||++... ....+.+|+.++..+. ||||+++++++.+....++||||+++|
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~ 91 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR----MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGG 91 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG----GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh----hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCC
Confidence 478999999999999975 5899999998543 3446889999999997 999999999999999999999999999
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecccc
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTIL 444 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~ 444 (447)
+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++ .+||+||-
T Consensus 92 ~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg 154 (325)
T 3kn6_A 92 ELFERIKKKK----HFSETEASYIMRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFG 154 (325)
T ss_dssp BHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEC----CEEEECCCT
T ss_pred cHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCHHHEEEecCCCcccEEEeccc
Confidence 9999998753 389999999999999999999999 999999999999998766 79999995
No 150
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=5e-25 Score=214.39 Aligned_cols=151 Identities=21% Similarity=0.248 Sum_probs=126.1
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc----ccccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER----TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
....++|+..+.||+|+||.||+|+.. +++.||+|+++... .......+.+|+++++.++||||+++++++.+.+
T Consensus 22 ~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 101 (345)
T 3hko_A 22 LELQKKYHLKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQ 101 (345)
T ss_dssp HHHHHHEEEEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSS
T ss_pred hhhhhheeecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCC
Confidence 344567899999999999999999964 58899999986432 2233457999999999999999999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCC------------------------------------CCCCChHHHHHHHHHHHHHH
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSS------------------------------------LPPLDWPTRKKIALGSARGL 409 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~------------------------------------~~~l~~~~~~~i~~~ia~gL 409 (447)
..++||||+++|+|.+++...... ...+++..+..++.|+++||
T Consensus 102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l 181 (345)
T 3hko_A 102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL 181 (345)
T ss_dssp EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence 999999999999999998631100 11134667788999999999
Q ss_pred hhhhcCCCCCeeecCCCCCceeeCCCC--ceeecccc
Q 013258 410 SYLHEHCDPKIIHRDVKAANILLDEDA--DQSSKTIL 444 (447)
Q Consensus 410 ~yLH~~~~~~ivHrDlkp~NILl~~~~--~~~i~df~ 444 (447)
+|||+. +|+||||||+|||++.++ .+||+||-
T Consensus 182 ~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~Dfg 215 (345)
T 3hko_A 182 HYLHNQ---GICHRDIKPENFLFSTNKSFEIKLVDFG 215 (345)
T ss_dssp HHHHHT---TEECCCCCGGGEEESCSSSCCEEECCCT
T ss_pred HHHHHC---CccccCCChhhEEEecCCCceEEEeecc
Confidence 999999 999999999999998877 89999995
No 151
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=99.91 E-value=7.1e-25 Score=213.87 Aligned_cols=143 Identities=31% Similarity=0.438 Sum_probs=124.8
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
+.|+..+.||+|+||.||+|+. .+++.||||+++..... ....++.+|+++++.++||||+++++++...+..++||
T Consensus 54 ~~y~~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 133 (348)
T 1u5q_A 54 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 133 (348)
T ss_dssp HHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEE
T ss_pred hheeeeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEE
Confidence 3477788999999999999996 56899999998643222 12346899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+. |+|.+.+..... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 134 e~~~-g~l~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~kL~DfG 199 (348)
T 1u5q_A 134 EYCL-GSASDLLEVHKK---PLQEVEIAAVTHGALQGLAYLHSH---NMIHRDVKAGNILLSEPGLVKLGDFG 199 (348)
T ss_dssp ECCS-EEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTEEEECCCT
T ss_pred ecCC-CCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEECCCCCEEEeecc
Confidence 9997 688888865432 489999999999999999999999 99999999999999999999999995
No 152
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=99.91 E-value=1.3e-24 Score=205.64 Aligned_cols=143 Identities=29% Similarity=0.452 Sum_probs=127.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc--ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER--TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+.. +++.||||.+.... .......+.+|+++++.++||||+++++++...+..++||
T Consensus 14 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 93 (284)
T 2vgo_A 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLML 93 (284)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hhceeeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEE
Confidence 56888899999999999999965 57899999985432 1223457899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 94 e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~Dfg 159 (284)
T 2vgo_A 94 EFAPRGELYKELQKHG----RFDEQRSATFMEELADALHYCHER---KVIHRDIKPENLLMGYKGELKIADFG 159 (284)
T ss_dssp CCCTTEEHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred EeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCHHHEEEcCCCCEEEeccc
Confidence 9999999999998753 388999999999999999999999 99999999999999999999999995
No 153
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=99.91 E-value=1.5e-24 Score=209.63 Aligned_cols=148 Identities=31% Similarity=0.402 Sum_probs=125.4
Q ss_pred hcCCCCCCccccCCCceEEEEEe------CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL------ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~------~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
.++|...+.||+|+||.||+|+. .+++.||||.++.........++.+|+.+++.++||||+++++++...+..
T Consensus 29 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 108 (327)
T 2yfx_A 29 RKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPR 108 (327)
T ss_dssp GGGCEEEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred hhheEEEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCc
Confidence 46788889999999999999984 246789999997544444455799999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCC---CCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC---Cceeec
Q 013258 368 LLVYPYMTNGSVASRLRERQSS---LPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSK 441 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~~i~ 441 (447)
++||||+++|+|.+++...... ...+++..+..++.|++.||+|||+. +|+||||||+|||++.+ ..+||+
T Consensus 109 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~---~i~H~dlkp~NIli~~~~~~~~~kl~ 185 (327)
T 2yfx_A 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLLTCPGPGRVAKIG 185 (327)
T ss_dssp EEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEEC
T ss_pred EEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhC---CeecCcCCHhHEEEecCCCcceEEEC
Confidence 9999999999999999875321 13488999999999999999999999 99999999999999954 459999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 186 Dfg 188 (327)
T 2yfx_A 186 DFG 188 (327)
T ss_dssp CCH
T ss_pred ccc
Confidence 985
No 154
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=99.91 E-value=1.3e-24 Score=214.02 Aligned_cols=138 Identities=24% Similarity=0.347 Sum_probs=117.2
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCCCC
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
.+.||+|+||.||+|+.. +|+.||+|+++.... .....+.+|++++..++||||+++++++...+..++||||+++|+
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~-~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~ 172 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGM-KDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGE 172 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSH-HHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEccccc-ccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCc
Confidence 467999999999999864 689999999865432 234579999999999999999999999999999999999999999
Q ss_pred hhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee--CCCCceeecccc
Q 013258 379 VASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL--DEDADQSSKTIL 444 (447)
Q Consensus 379 L~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl--~~~~~~~i~df~ 444 (447)
|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+|||+ ++++.+||+||-
T Consensus 173 L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~~~~~kl~DFG 234 (373)
T 2x4f_A 173 LFDRIIDESY---NLTELDTILFMKQICEGIRHMHQM---YILHLDLKPENILCVNRDAKQIKIIDFG 234 (373)
T ss_dssp EHHHHHHTGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEEETTTTEEEECCCS
T ss_pred HHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHHC---CcccccCCHHHEEEecCCCCcEEEEeCC
Confidence 9998875432 388999999999999999999999 99999999999999 667899999995
No 155
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=99.91 E-value=7.5e-25 Score=206.57 Aligned_cols=147 Identities=24% Similarity=0.342 Sum_probs=126.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~~lv 370 (447)
++|+..+.||+|+||.||+|+.. +++.||+|.++..... .....+.+|+.+++.++||||+++++++. .....++|
T Consensus 6 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 85 (279)
T 2w5a_A 6 EDYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIV 85 (279)
T ss_dssp GGEEEEEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEE
T ss_pred hheeeehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEE
Confidence 56788899999999999999965 6899999998654322 23446899999999999999999999874 35678999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC-----eeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK-----IIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~-----ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++|+|.+++.........+++..+..++.|++.||+|||+. + |+||||||+||++++++.+||+||-
T Consensus 86 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~---~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg 161 (279)
T 2w5a_A 86 MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRR---SDGGHTVLHRDLKPANVFLDGKQNVKLGDFG 161 (279)
T ss_dssp EECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHH---C------CCCCCSGGGEEECSSSCEEECCCC
T ss_pred EeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcc---cCCCCeeEEeccchhhEEEcCCCCEEEecCc
Confidence 999999999999986543334589999999999999999999998 6 9999999999999999999999995
No 156
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=99.91 E-value=5.9e-25 Score=215.28 Aligned_cols=154 Identities=19% Similarity=0.260 Sum_probs=132.2
Q ss_pred ccccHHHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-----CCCccc
Q 013258 283 KRFSLRELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----HRNLLR 356 (447)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~ 356 (447)
..+++++.....++|.+.+.||+|+||.||+|+.. +++.||||+++... .....+..|+.++..++ ||||++
T Consensus 23 ~~~~~~~g~~~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~h~~iv~ 100 (360)
T 3llt_A 23 VHFSWKKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK--KYTRSAKIEADILKKIQNDDINNNNIVK 100 (360)
T ss_dssp GSCCCCTTCEETTTEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSCH--HHHHHHHHHHHHHHHTCCCSTTGGGBCC
T ss_pred eeeeeecceEecCEEEEEEEEcccCCeEEEEEEECCCCeEEEEEEeccch--hhhhhhHHHHHHHHHhcccCCCCCCeec
Confidence 34555555566788999999999999999999964 68999999986422 22345788999999886 999999
Q ss_pred eeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC--
Q 013258 357 LYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-- 434 (447)
Q Consensus 357 l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-- 434 (447)
+++++...+..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++
T Consensus 101 ~~~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~NIll~~~~ 174 (360)
T 3llt_A 101 YHGKFMYYDHMCLIFEPL-GPSLYEIITRNNY--NGFHIEDIKLYCIEILKALNYLRKM---SLTHTDLKPENILLDDPY 174 (360)
T ss_dssp EEEEEEETTEEEEEECCC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCTT
T ss_pred ccceeeECCeeEEEEcCC-CCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCcccEEEcccc
Confidence 999999999999999999 9999999987542 2488999999999999999999999 9999999999999986
Q ss_pred -----------------------CCceeecccc
Q 013258 435 -----------------------DADQSSKTIL 444 (447)
Q Consensus 435 -----------------------~~~~~i~df~ 444 (447)
++.+||+||-
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DFG 207 (360)
T 3llt_A 175 FEKSLITVRRVTDGKKIQIYRTKSTGIKLIDFG 207 (360)
T ss_dssp CCEEEEEEECTTTCCEEEEEEESCCCEEECCCT
T ss_pred ccccccchhcccccccccccccCCCCEEEEecc
Confidence 7899999995
No 157
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=99.91 E-value=1.2e-24 Score=208.50 Aligned_cols=147 Identities=20% Similarity=0.308 Sum_probs=126.3
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|+. .+++.||||+++.... .....++.+|+.+++.++||||+++++++...+..++||
T Consensus 32 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 111 (310)
T 2wqm_A 32 ANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 111 (310)
T ss_dssp GGEEEEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred cceEEEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEE
Confidence 4577889999999999999996 4689999999865322 222346899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.........+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 112 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIl~~~~~~~kl~Dfg 181 (310)
T 2wqm_A 112 ELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSR---RVMHRDIKPANVFITATGVVKLGDLG 181 (310)
T ss_dssp ECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCC-
T ss_pred ecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhC---CeeCCCCcHHHEEEcCCCCEEEEecc
Confidence 99999999999976332233588999999999999999999999 99999999999999999999999995
No 158
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=99.91 E-value=1.1e-24 Score=212.09 Aligned_cols=145 Identities=26% Similarity=0.341 Sum_probs=128.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccccc----------------HHHHHHHHHHHhcCCCCCccce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGG----------------ELQFQTEVKIISMAVHRNLLRL 357 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------~~~~~~E~~~l~~l~H~niv~l 357 (447)
.++|.+.+.||+|+||.||+|+. +++.||||.+........ ...+.+|+.++..++||||+++
T Consensus 30 ~~~y~~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~ 108 (348)
T 2pml_X 30 INDYRIIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTC 108 (348)
T ss_dssp ETTEEEEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCC
T ss_pred cCceEEEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceE
Confidence 35788889999999999999999 899999999864432211 1679999999999999999999
Q ss_pred eeEEecCCceEEEeecCCCCChhhH------hhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCce
Q 013258 358 YGFCTTVTEKLLVYPYMTNGSVASR------LRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANI 430 (447)
Q Consensus 358 ~~~~~~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NI 430 (447)
++++...+..++||||+++|+|.++ +... ....+++..+..++.|++.||+|||+ . +|+||||||+||
T Consensus 109 ~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~--~~~~~~~~~~~~i~~qi~~~l~~lH~~~---~i~H~dl~p~Ni 183 (348)
T 2pml_X 109 EGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKN--YTCFIPIQVIKCIIKSVLNSFSYIHNEK---NICHRDVKPSNI 183 (348)
T ss_dssp SEEEESSSEEEEEEECCTTCBSSEESSSEESSCSS--SCCCCCHHHHHHHHHHHHHHHHHHHHTS---CEECCCCCGGGE
T ss_pred EEEEeeCCeEEEEEeccCCCcHHHHHHHhhhhhhc--cccCCCHHHHHHHHHHHHHHHHHHhccC---CEeecCCChHhE
Confidence 9999999999999999999999998 5432 12458999999999999999999998 8 999999999999
Q ss_pred eeCCCCceeecccc
Q 013258 431 LLDEDADQSSKTIL 444 (447)
Q Consensus 431 Ll~~~~~~~i~df~ 444 (447)
+++.++.+||+||-
T Consensus 184 l~~~~~~~kl~dfg 197 (348)
T 2pml_X 184 LMDKNGRVKLSDFG 197 (348)
T ss_dssp EECTTSCEEECCCT
T ss_pred EEcCCCcEEEeccc
Confidence 99999999999995
No 159
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=99.91 E-value=1.4e-24 Score=218.08 Aligned_cols=143 Identities=25% Similarity=0.336 Sum_probs=125.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~ 366 (447)
.++|.+.+.||+|+||.||+|+.. +++.||||+++..... ....++.+|+++++.++||||+++++++... ..
T Consensus 25 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~ 104 (432)
T 3n9x_A 25 PDNYIIKHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDE 104 (432)
T ss_dssp CTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCC
T ss_pred cCCEEEEEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCe
Confidence 357888999999999999999964 5889999999653222 2335689999999999999999999998765 56
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+. |+|.+++.... .+++..+..++.|+++||.|||+. +|+||||||+|||++.++.+||+||-
T Consensus 105 ~~lv~e~~~-~~L~~~~~~~~----~l~~~~~~~i~~qil~aL~~LH~~---givHrDlkp~NILl~~~~~~kL~DFG 174 (432)
T 3n9x_A 105 LYIVLEIAD-SDLKKLFKTPI----FLTEEHIKTILYNLLLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFG 174 (432)
T ss_dssp EEEEEECCS-EEHHHHHHSSC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecCC-cCHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CCCCCCCCHHHeEECCCCCEEEccCC
Confidence 899999986 59999997643 389999999999999999999999 99999999999999999999999995
No 160
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=99.91 E-value=2.2e-24 Score=220.89 Aligned_cols=144 Identities=22% Similarity=0.361 Sum_probs=124.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc------------ccHHHHHHHHHHHhcCCCCCccceeeE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS------------GGELQFQTEVKIISMAVHRNLLRLYGF 360 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~------------~~~~~~~~E~~~l~~l~H~niv~l~~~ 360 (447)
.++|.+.+.||+|+||+||+|+.. +++.||||+++..... .....+.+|+.+++.++||||++++++
T Consensus 35 ~~~Y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~ 114 (504)
T 3q5i_A 35 GESYFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDV 114 (504)
T ss_dssp GGTEEEEEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEE
T ss_pred ccceEEEeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEE
Confidence 467888899999999999999965 5889999998654321 224568999999999999999999999
Q ss_pred EecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---c
Q 013258 361 CTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---D 437 (447)
Q Consensus 361 ~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~ 437 (447)
+......++||||+++|+|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++ .
T Consensus 115 ~~~~~~~~lv~e~~~gg~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~ 187 (504)
T 3q5i_A 115 FEDKKYFYLVTEFYEGGELFEQIINRH----KFDECDAANIMKQILSGICYLHKH---NIVHRDIKPENILLENKNSLLN 187 (504)
T ss_dssp EECSSEEEEEEECCTTCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESSTTCCSS
T ss_pred EEcCCEEEEEEecCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeCCCcHHHEEEecCCCCcc
Confidence 999999999999999999999997653 389999999999999999999999 999999999999999876 6
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+||+||-
T Consensus 188 ~kl~Dfg 194 (504)
T 3q5i_A 188 IKIVDFG 194 (504)
T ss_dssp EEECCCT
T ss_pred EEEEECC
Confidence 8999995
No 161
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=99.91 E-value=2.4e-24 Score=205.46 Aligned_cols=144 Identities=25% Similarity=0.401 Sum_probs=126.5
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|++.+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++..++||||+++++++...+..++|||
T Consensus 18 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 96 (302)
T 2j7t_A 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKS-EEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIE 96 (302)
T ss_dssp GGTEEEEEEEECSTTCCEEEEEETTTCCEEEEEEEC-----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEE
T ss_pred ccceeecceeccCCCeEEEEEEEcCCCcEEEEEEecCCC-HHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEE
Confidence 356888899999999999999975 58999999986543 3345579999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||-
T Consensus 97 ~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 162 (302)
T 2j7t_A 97 FCPGGAVDAIMLELDR---GLTEPQIQVVCRQMLEALNFLHSK---RIIHRDLKAGNVLMTLEGDIRLADFG 162 (302)
T ss_dssp CCTTEEHHHHHHHHTS---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTSCEEECCCH
T ss_pred eCCCCcHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHhcC---CcccCCCCHHHEEECCCCCEEEEECC
Confidence 9999999999876432 388999999999999999999999 99999999999999999999999995
No 162
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=99.91 E-value=2.9e-24 Score=211.00 Aligned_cols=149 Identities=23% Similarity=0.304 Sum_probs=130.7
Q ss_pred HHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-------cHHHHHHHHHHHhcC-CCCCccceee
Q 013258 289 ELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-------GELQFQTEVKIISMA-VHRNLLRLYG 359 (447)
Q Consensus 289 ~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l-~H~niv~l~~ 359 (447)
......++|++.+.||+|+||.||+|+.. +|+.||||+++...... ....+.+|+.++..+ +||||+++++
T Consensus 88 ~~~~~~~~y~~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~ 167 (365)
T 2y7j_A 88 AAKEFYQKYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLID 167 (365)
T ss_dssp HHHHHHHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEE
T ss_pred hhhhhhhhcccceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEE
Confidence 33445677999999999999999999975 69999999986543211 123578999999999 7999999999
Q ss_pred EEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 360 FCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 360 ~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
++......++||||+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||+++++.+|
T Consensus 168 ~~~~~~~~~lv~e~~~g~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---gi~H~Dlkp~NIl~~~~~~ik 240 (365)
T 2y7j_A 168 SYESSSFMFLVFDLMRKGELFDYLTEKV----ALSEKETRSIMRSLLEAVSFLHAN---NIVHRDLKPENILLDDNMQIR 240 (365)
T ss_dssp EEEBSSEEEEEECCCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEE
T ss_pred EEeeCCEEEEEEEeCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEECCCCCEE
Confidence 9999999999999999999999998653 389999999999999999999999 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
++||-
T Consensus 241 l~DfG 245 (365)
T 2y7j_A 241 LSDFG 245 (365)
T ss_dssp ECCCT
T ss_pred EEecC
Confidence 99995
No 163
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=99.91 E-value=1.2e-24 Score=210.35 Aligned_cols=143 Identities=27% Similarity=0.473 Sum_probs=125.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCc----EEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGK----LVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~----~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
++|+..+.||+|+||.||+|+.. +++ .||+|.++..........+.+|+.+++.++||||+++++++.... .++
T Consensus 15 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~-~~~ 93 (327)
T 3lzb_A 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTST-VQL 93 (327)
T ss_dssp TTEEEEEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESSS-EEE
T ss_pred hHceEEEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecCC-ceE
Confidence 56888899999999999999864 444 357887765544555668999999999999999999999998754 889
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||+++|+|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 94 v~~~~~~g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kL~DfG 162 (327)
T 3lzb_A 94 ITQLMPFGCLLDYVREHKD---NIGSQYLLNWCVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFG 162 (327)
T ss_dssp EECCCSSCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEETTEEEECCTT
T ss_pred EEEecCCCcHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHhhC---CCcCCCCCHHHEEEcCCCCEEEccCc
Confidence 9999999999999987533 388999999999999999999999 99999999999999999999999995
No 164
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=99.91 E-value=1.8e-24 Score=202.99 Aligned_cols=144 Identities=29% Similarity=0.442 Sum_probs=120.5
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc---ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS---GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|+..+.||+|+||.||+|+.. ++.||||+++..... .....+.+|+++++.++||||+++++++...+..++||
T Consensus 7 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (271)
T 3dtc_A 7 AELTLEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVM 85 (271)
T ss_dssp TSEEEEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEE
T ss_pred hheeeeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEE
Confidence 56778899999999999999974 889999998654322 22356899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC--------CCceeeccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE--------DADQSSKTI 443 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~--------~~~~~i~df 443 (447)
||+++++|.+++... .+++..+..++.|+++||+|||++...+|+||||||+|||+++ ++.+|++||
T Consensus 86 e~~~~~~L~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Df 160 (271)
T 3dtc_A 86 EFARGGPLNRVLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDF 160 (271)
T ss_dssp ECCTTEEHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCC
T ss_pred EcCCCCCHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccC
Confidence 999999999998643 3889999999999999999999982223999999999999996 677999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 161 g 161 (271)
T 3dtc_A 161 G 161 (271)
T ss_dssp C
T ss_pred C
Confidence 5
No 165
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=99.91 E-value=1.9e-24 Score=209.33 Aligned_cols=143 Identities=25% Similarity=0.422 Sum_probs=126.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+|+.. +++.||||++....... ....+.+|+.++..++||||+++++++...+..++|||
T Consensus 25 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 104 (331)
T 4aaa_A 25 EKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFE 104 (331)
T ss_dssp GGEEEEEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred hhheeeeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEe
Confidence 46777899999999999999975 48999999985443222 23457899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 105 ~~~~~~l~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~---~ivH~dlkp~Nil~~~~~~~kl~Dfg 169 (331)
T 4aaa_A 105 FVDHTILDDLELFPN----GLDYQVVQKYLFQIINGIGFCHSH---NIIHRDIKPENILVSQSGVVKLCDFG 169 (331)
T ss_dssp CCSEEHHHHHHHSTT----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred cCCcchHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHHC---CEEccCcChheEEEcCCCcEEEEeCC
Confidence 999999888766543 389999999999999999999999 99999999999999999999999995
No 166
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=99.91 E-value=9.3e-25 Score=209.62 Aligned_cols=152 Identities=26% Similarity=0.430 Sum_probs=123.5
Q ss_pred HHHHhcCCCCCCccccCCCceEEEEEeC----CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC
Q 013258 290 LQVATDGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV 364 (447)
Q Consensus 290 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~ 364 (447)
+....++|...+.||+|+||.||+|+.. +++.||||.++..... .....+.+|+.+++.++||||+++++++...
T Consensus 29 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~ 108 (313)
T 3brb_A 29 VVIDRNLLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEM 108 (313)
T ss_dssp TBCCGGGEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-
T ss_pred cccCHHHeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec
Confidence 3445567888899999999999999753 3458999999754322 2234689999999999999999999999875
Q ss_pred Cc-----eEEEeecCCCCChhhHhhccC--CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc
Q 013258 365 TE-----KLLVYPYMTNGSVASRLRERQ--SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD 437 (447)
Q Consensus 365 ~~-----~~lv~e~~~~gsL~~~l~~~~--~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~ 437 (447)
+. .++||||+++|+|.+++.... .....+++..+..++.|+++||.|||++ +|+||||||+||++++++.
T Consensus 109 ~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~ 185 (313)
T 3brb_A 109 SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNR---NFLHRDLAARNCMLRDDMT 185 (313)
T ss_dssp ------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCSGGGEEECTTSC
T ss_pred cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCcceEEEcCCCc
Confidence 53 499999999999999985432 2234589999999999999999999999 9999999999999999999
Q ss_pred eeecccc
Q 013258 438 QSSKTIL 444 (447)
Q Consensus 438 ~~i~df~ 444 (447)
+||+||-
T Consensus 186 ~kl~Dfg 192 (313)
T 3brb_A 186 VCVADFG 192 (313)
T ss_dssp EEECSCS
T ss_pred EEEeecC
Confidence 9999995
No 167
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=99.91 E-value=3.8e-24 Score=204.96 Aligned_cols=146 Identities=29% Similarity=0.440 Sum_probs=121.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc----cccHHHHHHHHHHHhcCC---CCCccceeeEEecC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT----SGGELQFQTEVKIISMAV---HRNLLRLYGFCTTV 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~ 364 (447)
..++|++.+.||+|+||+||+|+. .+++.||||+++.... ......+.+|+++++.++ ||||+++++++...
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~ 86 (308)
T 3g33_A 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS 86 (308)
T ss_dssp ---CCEEEEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC
T ss_pred cccceEEEEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc
Confidence 457899999999999999999995 4689999999864321 112345778888777665 99999999999875
Q ss_pred C-----ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 365 T-----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 365 ~-----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
. ..++||||+. |+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+|
T Consensus 87 ~~~~~~~~~lv~e~~~-~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~k 160 (308)
T 3g33_A 87 RTDREIKVTLVFEHVD-QDLRTYLDKAPP--PGLPAETIKDLMRQFLRGLDFLHAN---CIVHRDLKPENILVTSGGTVK 160 (308)
T ss_dssp CSSSEEEEEEEEECCC-CBHHHHHHTCCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCTTTEEECTTSCEE
T ss_pred CCCCceeEEEEehhhh-cCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEcCCCCEE
Confidence 5 4799999997 699999986533 2389999999999999999999999 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 161 l~Dfg 165 (308)
T 3g33_A 161 LADFG 165 (308)
T ss_dssp ECSCS
T ss_pred EeeCc
Confidence 99995
No 168
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=99.91 E-value=1.4e-24 Score=205.12 Aligned_cols=144 Identities=24% Similarity=0.346 Sum_probs=125.1
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~l 369 (447)
.++|...+.||+|+||.||+|+..+ +..||||.++..........+.+|+.+++.++||||+++++++.. +..++
T Consensus 11 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~ 89 (281)
T 3cc6_A 11 REDVVLNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWI 89 (281)
T ss_dssp GGGEEEEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEE
T ss_pred ccceEEEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEE
Confidence 4567788999999999999998532 346999999765433445679999999999999999999999765 45789
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||+++++|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+||-
T Consensus 90 v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~kl~Dfg 158 (281)
T 3cc6_A 90 IMELYPYGELGHYLERNKN---SLKVLTLVLYSLQICKAMAYLESI---NCVHRDIAVRNILVASPECVKLGDFG 158 (281)
T ss_dssp EEECCTTCBHHHHHHHHTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEEEETTEEEECCCC
T ss_pred EEecCCCCCHHHHHHhccc---cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCccceEEECCCCcEEeCccC
Confidence 9999999999999976532 388999999999999999999999 99999999999999999999999995
No 169
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=2e-24 Score=210.57 Aligned_cols=145 Identities=28% Similarity=0.419 Sum_probs=121.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc----cHHHHHHHHHHHhcCCCCCccceeeEEecCCce
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG----GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~----~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~ 367 (447)
..++|+..+.||+|+||.||+|+.. +|+.||||.++...... ....+.+|+.++..++||||+++++++...+..
T Consensus 8 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 87 (346)
T 1ua2_A 8 RAKRYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNI 87 (346)
T ss_dssp -----CEEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCC
T ss_pred HhcccEEEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCce
Confidence 4567999999999999999999964 58999999996432211 123688999999999999999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++ +|.+++.... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 88 ~lv~e~~~~-~l~~~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (346)
T 1ua2_A 88 SLVFDFMET-DLEVIIKDNS---LVLTPSHIKAYMLMTLQGLEYLHQH---WILHRDLKPNNLLLDENGVLKLADFG 157 (346)
T ss_dssp EEEEECCSE-EHHHHHTTCC---SSCCSSHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECCCG
T ss_pred EEEEEcCCC-CHHHHHHhcC---cCCCHHHHHHHHHHHHHHHHHHHHC---CEECCCCCHHHEEEcCCCCEEEEecc
Confidence 999999986 8888887543 2488899999999999999999999 99999999999999999999999995
No 170
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=99.91 E-value=1.4e-24 Score=210.14 Aligned_cols=144 Identities=22% Similarity=0.351 Sum_probs=122.4
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..++|+..+.||+|+||+||+|+.. +++.||||+++...... ....+.+|+.+++.++||||+++++++...+..++|
T Consensus 32 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv 111 (329)
T 3gbz_A 32 SIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLI 111 (329)
T ss_dssp CGGGEEEEEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEE
T ss_pred chhhEEEEEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEE
Confidence 4467888999999999999999854 68999999996543222 234578999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-----CCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-----EDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-----~~~~~~i~df~ 444 (447)
|||++ |+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++ +++.+||+||-
T Consensus 112 ~e~~~-~~L~~~~~~~~----~~~~~~~~~i~~ql~~~l~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg 182 (329)
T 3gbz_A 112 FEYAE-NDLKKYMDKNP----DVSMRVIKSFLYQLINGVNFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFG 182 (329)
T ss_dssp EECCS-EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred EecCC-CCHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence 99998 59999997654 388999999999999999999999 999999999999994 45569999995
No 171
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=99.91 E-value=3.1e-24 Score=212.47 Aligned_cols=143 Identities=24% Similarity=0.390 Sum_probs=116.7
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCC-CCCccceeeEEecCC--ce
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVT--EK 367 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~--~~ 367 (447)
..++|+..+.||+|+||.||+|... +++.||||++..... ......+.+|+.++..+. ||||+++++++...+ ..
T Consensus 7 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~ 86 (388)
T 3oz6_A 7 VLRKYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDV 86 (388)
T ss_dssp HHTTEEEEEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCE
T ss_pred ccCceEEEEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEE
Confidence 4578999999999999999999864 689999999854322 223346889999999997 999999999997544 68
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||++ |+|.++++.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 87 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~---~ivHrDlkp~NIll~~~~~~kl~DFG 154 (388)
T 3oz6_A 87 YLVFDYME-TDLHAVIRAN-----ILEPVHKQYVVYQLIKVIKYLHSG---GLLHRDMKPSNILLNAECHVKVADFG 154 (388)
T ss_dssp EEEEECCS-EEHHHHHHHT-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEecccC-cCHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHhC---CEEeCCCCHHHeEEcCCCCEEecCCc
Confidence 99999997 6899998763 388999999999999999999999 99999999999999999999999995
No 172
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=99.91 E-value=2.4e-24 Score=219.57 Aligned_cols=144 Identities=26% Similarity=0.438 Sum_probs=128.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.++|+..+.||+|+||.||+|+.. +++.||||++..... ......+.+|+.+++.++||||+++++++...+..++|
T Consensus 25 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv 104 (484)
T 3nyv_A 25 SDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLV 104 (484)
T ss_dssp HHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred cCceEEeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEE
Confidence 356888899999999999999965 689999999854432 23455799999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
|||+.+|+|.+.+.... .+++..+..++.|++.||+|||++ +|+||||||+|||+ +.++.+||+||-
T Consensus 105 ~e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 174 (484)
T 3nyv_A 105 GEVYTGGELFDEIISRK----RFSEVDAARIIRQVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFG 174 (484)
T ss_dssp ECCCCSCBHHHHHHTCS----CCBHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESSSSTTCCEEECCTT
T ss_pred EecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHHHEEEecCCCCCcEEEEeee
Confidence 99999999999987653 389999999999999999999999 99999999999999 567899999995
No 173
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=99.91 E-value=2e-24 Score=209.80 Aligned_cols=148 Identities=23% Similarity=0.305 Sum_probs=124.4
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHH-HhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKI-ISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~-l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||.||+|+. .+|+.||||+++.........++..|... ++.++||||+++++++...+..++||
T Consensus 50 ~~~~~~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 129 (340)
T 3an0_A 50 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 129 (340)
T ss_dssp SSCEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEE
T ss_pred hhheeEeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEH
Confidence 45677788999999999999996 46899999999765443344456666665 78889999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++ +|.+++.........+++..+..++.|++.||+|||++. +|+||||||+|||++.++.+||+||-
T Consensus 130 e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~--~ivH~Dlkp~NIl~~~~~~~kl~Dfg 199 (340)
T 3an0_A 130 ELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 199 (340)
T ss_dssp CCCSE-EHHHHHHHHHHTSCCCCHHHHHHHHHHHHHHHHHHHHHT--CCCCCSCCSTTEEECSTTCEEECCCS
T ss_pred HHhhC-cHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeeCC
Confidence 99975 999888753222335899999999999999999999732 89999999999999999999999995
No 174
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=99.91 E-value=1.4e-24 Score=209.76 Aligned_cols=143 Identities=26% Similarity=0.394 Sum_probs=125.2
Q ss_pred cCCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 367 (447)
++|+..+.||+|+||.||+|++ .+++.||||+++... ......+.+|+++++.++||||+++++++. .....
T Consensus 23 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 101 (327)
T 3lxl_A 23 RHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSG-PDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSL 101 (327)
T ss_dssp GGEEEEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCC-HHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEE
T ss_pred hhhhhhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCC-HHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceE
Confidence 5677889999999999999984 358899999986542 223446899999999999999999999886 45568
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 102 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 172 (327)
T 3lxl_A 102 RLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGSR---RCVHRDLAARNILVESEAHVKIADFG 172 (327)
T ss_dssp EEEEECCTTCBHHHHHHHHGG---GCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCGG
T ss_pred EEEEeecCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCChhhEEECCCCCEEEcccc
Confidence 999999999999999986432 389999999999999999999999 99999999999999999999999995
No 175
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=99.91 E-value=1.9e-24 Score=212.40 Aligned_cols=141 Identities=23% Similarity=0.352 Sum_probs=117.2
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------c
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------E 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 366 (447)
++|+..+.||+|+||.||+|+.. +|+.||||++...... ....++.+|+++++.++||||+++++++.... .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~ 104 (367)
T 1cm8_A 25 AVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTD 104 (367)
T ss_dssp SSEEEEEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCC
T ss_pred ceEEEeEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCce
Confidence 56788899999999999999964 6999999998543222 22346889999999999999999999997653 4
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 105 ~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~kl~Dfg 173 (367)
T 1cm8_A 105 FYLVMPFM-GTDLGKLMKHE-----KLGEDRIQFLVYQMLKGLRYIHAA---GIIHRDLKPGNLAVNEDCELKILDFG 173 (367)
T ss_dssp CEEEEECC-SEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEEecC-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCHHHEEEcCCCCEEEEeee
Confidence 59999999 88999998763 388999999999999999999999 99999999999999999999999995
No 176
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=99.91 E-value=2.7e-24 Score=219.78 Aligned_cols=143 Identities=24% Similarity=0.385 Sum_probs=122.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
+.|+..+.||+|+||+||+|+.. ++..||||+++.... ......+.+|+.+++.++||||+++++++......++|||
T Consensus 37 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e 116 (494)
T 3lij_A 37 EMYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVME 116 (494)
T ss_dssp HHEEEEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred cCeEEeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEe
Confidence 45888899999999999999965 689999999865432 2234578999999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC---Cceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~~i~df~ 444 (447)
|+++|+|.+.+.... .+++..+..++.|+++||+|||+. +|+||||||+|||++.+ +.+||+||-
T Consensus 117 ~~~~g~L~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG 184 (494)
T 3lij_A 117 CYKGGELFDEIIHRM----KFNEVDAAVIIKQVLSGVTYLHKH---NIVHRDLKPENLLLESKEKDALIKIVDFG 184 (494)
T ss_dssp CCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred cCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceeccCChhhEEEeCCCCCCcEEEEECC
Confidence 999999999887653 388999999999999999999999 99999999999999874 459999995
No 177
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=99.91 E-value=9.8e-25 Score=207.31 Aligned_cols=143 Identities=24% Similarity=0.339 Sum_probs=122.1
Q ss_pred hcCCCCCC-ccccCCCceEEEEEe---CCCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 294 TDGFSNKN-ILGRGGFGKVYKGRL---ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 294 ~~~~~~~~-~lg~G~~g~Vy~~~~---~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
.++|.+.+ .||+|+||.||+|.+ .+++.||||+++...... ...++.+|+++++.++||||+++++++ ..+..+
T Consensus 15 ~~~y~~~~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~ 93 (291)
T 1xbb_A 15 RKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWM 93 (291)
T ss_dssp GGGEEEEEEEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEE
T ss_pred chhhhhccCccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcE
Confidence 34566666 899999999999964 246889999997543222 245799999999999999999999998 567789
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++.++.+||+||-
T Consensus 94 lv~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dikp~Nil~~~~~~~kl~Dfg 162 (291)
T 1xbb_A 94 LVMEMAELGPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 162 (291)
T ss_dssp EEEECCTTEEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETTEEEECCCT
T ss_pred EEEEeCCCCCHHHHHHhCc----CCCHHHHHHHHHHHHHHHHHHHhC---CeEcCCCCcceEEEeCCCcEEEccCC
Confidence 9999999999999998753 388999999999999999999999 99999999999999999999999995
No 178
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=99.91 E-value=2.5e-24 Score=209.51 Aligned_cols=140 Identities=19% Similarity=0.289 Sum_probs=121.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv 370 (447)
..++|+..+.||+|+||+||+|+.. +++.||||+++.... ...+|++++.++ +||||+++++++.+.+..++|
T Consensus 20 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~-----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv 94 (342)
T 2qr7_A 20 FTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR-----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVV 94 (342)
T ss_dssp HHHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC-----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEE
T ss_pred ccccEEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC-----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEE
Confidence 3467888999999999999999965 589999999965422 245688888777 799999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-C---ceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-A---DQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~---~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||+.++ + .+||+||-
T Consensus 95 ~E~~~gg~L~~~i~~~~----~~~~~~~~~~~~qi~~al~~lH~~---givHrDlkp~NIl~~~~~~~~~~~kl~Dfg 165 (342)
T 2qr7_A 95 TELMKGGELLDKILRQK----FFSEREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFG 165 (342)
T ss_dssp ECCCCSCBHHHHHHTCT----TCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESSSSCSGGGEEECCCT
T ss_pred EeCCCCCcHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeccCCHHHEEEecCCCCcCeEEEEECC
Confidence 99999999999997653 389999999999999999999999 99999999999998543 3 49999995
No 179
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=99.91 E-value=1.8e-24 Score=204.25 Aligned_cols=141 Identities=25% Similarity=0.433 Sum_probs=124.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec---------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--------- 363 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 363 (447)
.++|+..+.||+|+||.||+|+.. +++.||+|.++... ..+.+|++++..++||||+++++++..
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 84 (284)
T 2a19_B 10 GMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSS 84 (284)
T ss_dssp HHHEEEEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS-----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC-----
T ss_pred ccccceeeeeccCCceEEEEEEEcCCCeEEEEEEecccc-----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccc
Confidence 456888899999999999999975 68999999986432 257789999999999999999998854
Q ss_pred -------CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 364 -------VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 364 -------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
....++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||+++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~ 159 (284)
T 2a19_B 85 KNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRG--EKLDKVLALELFEQITKGVDYIHSK---KLINRDLKPSNIFLVDTK 159 (284)
T ss_dssp ----CCEEEEEEEEECCCCSCBHHHHHHHGGG--SCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEEETT
T ss_pred ccccccCcceEEEEEeccCCCCHHHHHhhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeeeccCCHHHEEEcCCC
Confidence 3457999999999999999976422 2488999999999999999999999 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+||+||-
T Consensus 160 ~~kl~Dfg 167 (284)
T 2a19_B 160 QVKIGDFG 167 (284)
T ss_dssp EEEECCCT
T ss_pred CEEECcch
Confidence 99999995
No 180
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=99.90 E-value=2.9e-24 Score=207.12 Aligned_cols=143 Identities=24% Similarity=0.347 Sum_probs=121.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-------cccHHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-------SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-------~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
.++|.+.+.||+|+||.||+|+.. +++.||||.++.... ......+.+|+++++.++||||+++++++...+
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~ 88 (322)
T 2ycf_A 9 RDEYIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED 88 (322)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS
T ss_pred hhceeEeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc
Confidence 457888999999999999999965 588999999864321 111234889999999999999999999987654
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKT 442 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~d 442 (447)
.++||||+++|+|.+++.... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++. +||+|
T Consensus 89 -~~lv~e~~~~~~L~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~D 160 (322)
T 2ycf_A 89 -YYIVLELMEGGELFDKVVGNK----RLKEATCKLYFYQMLLAVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITD 160 (322)
T ss_dssp -EEEEEECCTTEETHHHHSTTC----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSSSCCEEECC
T ss_pred -eEEEEecCCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCCHHHEEEecCCCCCeEEEcc
Confidence 899999999999999987543 388999999999999999999999 9999999999999998765 99999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 161 fg 162 (322)
T 2ycf_A 161 FG 162 (322)
T ss_dssp CT
T ss_pred Cc
Confidence 95
No 181
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=99.90 E-value=4.6e-24 Score=203.23 Aligned_cols=144 Identities=22% Similarity=0.443 Sum_probs=124.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
++|+..+.||+|+||.||+|+.. +++.||||.++..... .....+.+|+.+++.++||||+++++++...+..++|||
T Consensus 3 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 82 (299)
T 2r3i_A 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFE 82 (299)
T ss_dssp TTEEEEEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred chhhhhhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEE
Confidence 56788899999999999999975 6899999998654322 223568899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+. |+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+||-
T Consensus 83 ~~~-~~L~~~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nili~~~~~~kl~dfg 148 (299)
T 2r3i_A 83 FLH-QDLKKFMDASAL--TGIPLPLIKSYLFQLLQGLAFCHSH---RVLHRDLKPQNLLINTEGAIKLADFG 148 (299)
T ss_dssp CCS-EEHHHHHHHTTT--TCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECSTT
T ss_pred ccc-CCHHHHHHhhhc--cCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHeEEcCCCCEEECcch
Confidence 997 699999876532 2378899999999999999999999 99999999999999999999999995
No 182
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=99.90 E-value=2.7e-24 Score=206.06 Aligned_cols=143 Identities=29% Similarity=0.470 Sum_probs=121.9
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
++|++.+.||+|+||.||+|+.. ++.||||.+... .....+.+|++++++++||||+++++++. +..++||||+
T Consensus 8 ~~~~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~---~~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~ 81 (307)
T 2eva_A 8 KEIEVEEVVGRGAFGVVCKAKWR-AKDVAIKQIESE---SERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYA 81 (307)
T ss_dssp GGEEEEEEEECCSSSEEEEEEET-TEEEEEEECSST---THHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECC
T ss_pred hHeeeeeEeecCCCceEEEEEEC-CeeEEEEEecCh---hHHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcC
Confidence 45777899999999999999985 788999998643 23457999999999999999999999877 4589999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc-eeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-QSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-~~i~df~ 444 (447)
++|+|.+++.... ....+++..+..++.|+++||+|||+.+..+|+||||||+|||+++++. +||+||-
T Consensus 82 ~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg 151 (307)
T 2eva_A 82 EGGSLYNVLHGAE-PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151 (307)
T ss_dssp TTCBHHHHHHCSS-SEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCC
T ss_pred CCCCHHHHHhccC-CCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccc
Confidence 9999999998643 2224678899999999999999999932228999999999999998886 7999995
No 183
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=99.90 E-value=2e-24 Score=205.77 Aligned_cols=143 Identities=24% Similarity=0.403 Sum_probs=124.9
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec---------
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--------- 363 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--------- 363 (447)
.++|+..+.||+|+||.||+|+.. +++.||||.++.. ......+.+|+.+++.++||||+++++++..
T Consensus 5 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~--~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~ 82 (303)
T 1zy4_A 5 ASDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT--EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMT 82 (303)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE--HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC---
T ss_pred cccchhhheeccCCcEEEEEEEEcCCCeEEEEEEEecc--HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhc
Confidence 456888899999999999999964 6899999998543 2234568999999999999999999998865
Q ss_pred ----CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCcee
Q 013258 364 ----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 364 ----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
.+..++||||+++|+|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+|
T Consensus 83 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dlkp~Nil~~~~~~~k 156 (303)
T 1zy4_A 83 AVKKKSTLFIQMEYCENGTLYDLIHSEN---LNQQRDEYWRLFRQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVK 156 (303)
T ss_dssp ---CEEEEEEEEECCCSCBHHHHHHHSC---GGGCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEE
T ss_pred ccccCCceEEEEecCCCCCHHHhhhccc---cccchHHHHHHHHHHHHHHHHHHhC---CeecccCCHHhEEEcCCCCEE
Confidence 346799999999999999998643 2367889999999999999999999 999999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
++||-
T Consensus 157 l~dfg 161 (303)
T 1zy4_A 157 IGDFG 161 (303)
T ss_dssp ECCCC
T ss_pred EeeCc
Confidence 99995
No 184
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=99.90 E-value=2.1e-24 Score=218.45 Aligned_cols=141 Identities=23% Similarity=0.292 Sum_probs=121.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecC------C
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------T 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~ 365 (447)
.++|+..+.||+|+||+||+|+.. +++.||||++.... ......++.+|+.+++.++||||+++++++... .
T Consensus 61 ~~~y~~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~ 140 (464)
T 3ttj_A 61 LKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQ 140 (464)
T ss_dssp ETTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCC
T ss_pred cCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCC
Confidence 367888999999999999999864 58999999996442 222344688999999999999999999999654 3
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++||||+++ ++.+.+.. .+++..+..++.|+++||+|||+. +|+||||||+|||++.++.+||+||.
T Consensus 141 ~~~lv~E~~~~-~l~~~~~~------~l~~~~~~~~~~qil~aL~~lH~~---~iiHrDlkp~NIll~~~~~~kl~DFG 209 (464)
T 3ttj_A 141 DVYLVMELMDA-NLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 209 (464)
T ss_dssp EEEEEEECCSE-EHHHHHTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEeCCCC-CHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCChHhEEEeCCCCEEEEEEE
Confidence 56999999976 56666643 278999999999999999999999 99999999999999999999999995
No 185
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=99.90 E-value=3.7e-24 Score=203.77 Aligned_cols=144 Identities=28% Similarity=0.313 Sum_probs=127.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--------ccHHHHHHHHHHHhcCC-CCCccceeeEEec
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--------GGELQFQTEVKIISMAV-HRNLLRLYGFCTT 363 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--------~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~ 363 (447)
.++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|++++.++. ||||+++++++..
T Consensus 16 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 95 (298)
T 1phk_A 16 YENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYET 95 (298)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEC
T ss_pred hhccceeeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeecc
Confidence 467888899999999999999975 5899999998643211 11235789999999995 9999999999999
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
.+..++||||+++++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+||
T Consensus 96 ~~~~~lv~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~df 168 (298)
T 1phk_A 96 NTFFFLVFDLMKKGELFDYLTEKV----TLSEKETRKIMRALLEVICALHKL---NIVHRDLKPENILLDDDMNIKLTDF 168 (298)
T ss_dssp SSEEEEEEECCTTCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCC
T ss_pred CCeEEEEEeccCCCcHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCcceEEEcCCCcEEEecc
Confidence 999999999999999999998753 388999999999999999999999 9999999999999999999999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 169 g 169 (298)
T 1phk_A 169 G 169 (298)
T ss_dssp T
T ss_pred c
Confidence 5
No 186
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=99.90 E-value=3.1e-24 Score=225.11 Aligned_cols=136 Identities=26% Similarity=0.366 Sum_probs=120.0
Q ss_pred CccccCCCceEEEEEeC---CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
+.||+|+||+||+|.+. +++.||||+++..... ....++.+|++++..++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 47999999999999652 4678999999765432 234579999999999999999999999864 568999999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+|.+++.... .+++..+..|+.||+.||+|||++ +||||||||+|||+++++.+||+||-
T Consensus 454 g~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~yLH~~---~iiHrDLkp~NILl~~~~~~kL~DFG 514 (635)
T 4fl3_A 454 GPLNKYLQQNR----HVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFG 514 (635)
T ss_dssp EEHHHHHHHCT----TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCTT
T ss_pred CCHHHHHhhCC----CCCHHHHHHHHHHHHHHHHHHHHC---CEeCCCCChHhEEEeCCCCEEEEEcC
Confidence 99999997653 389999999999999999999999 99999999999999999999999995
No 187
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=207.22 Aligned_cols=143 Identities=25% Similarity=0.441 Sum_probs=124.7
Q ss_pred cCCCCCCccccCCCceEEEEEe-----CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCC--ce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-----ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVT--EK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-----~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~--~~ 367 (447)
++|+..+.||+|+||.||+|++ .+++.||||+++... ......+.+|+++++.++||||+++++++...+ ..
T Consensus 41 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 119 (326)
T 2w1i_A 41 RHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHST-EEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNL 119 (326)
T ss_dssp GGEEEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCC-SHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CC
T ss_pred HHceeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCC-HHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCce
Confidence 4577789999999999999984 358899999986532 233457999999999999999999999987644 68
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 120 ~lv~e~~~~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dikp~NIli~~~~~~kL~Dfg 190 (326)
T 2w1i_A 120 KLIMEYLPYGSLRDYLQKHKE---RIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKIGDFG 190 (326)
T ss_dssp EEEECCCTTCBHHHHHHHSTT---SSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred EEEEECCCCCCHHHHHHhccc---CCCHHHHHHHHHHHHHHHHHHHhC---CEeccCCCcceEEEcCCCcEEEecCc
Confidence 999999999999999987532 388999999999999999999999 99999999999999999999999995
No 188
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=99.90 E-value=3.1e-24 Score=218.91 Aligned_cols=144 Identities=24% Similarity=0.408 Sum_probs=127.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccc-ccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEER-TSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|++.+.||+|+||+||+|+.. +++.||||+++... .......+.+|+++++.++||||+++++++......++||
T Consensus 21 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~ 100 (486)
T 3mwu_A 21 AERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVG 100 (486)
T ss_dssp HHHEEEEEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEE
T ss_pred hcceEEeEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEE
Confidence 356888999999999999999965 68999999986433 2334557999999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC---CCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD---EDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~---~~~~~~i~df~ 444 (447)
||+++|+|.+.+.... .+++..+..++.|++.||.|||++ +|+||||||+|||++ .++.+||+||-
T Consensus 101 e~~~~~~L~~~~~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg 169 (486)
T 3mwu_A 101 ELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (486)
T ss_dssp CCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEESSSSTTCCEEECSCS
T ss_pred EcCCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeEeccCchHHEEEecCCCCCCEEEEECC
Confidence 9999999999987654 389999999999999999999999 999999999999995 45679999995
No 189
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=99.90 E-value=1.9e-24 Score=213.69 Aligned_cols=145 Identities=21% Similarity=0.294 Sum_probs=119.5
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV----- 364 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----- 364 (447)
....++|+..+.||+|+||+||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 3 ~~~~~~y~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~-----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~ 77 (383)
T 3eb0_A 3 ETSSKKYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR-----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEP 77 (383)
T ss_dssp ---CTTEEEEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT-----SCCHHHHHHTTCCCTTBCCEEEEEEEC-----
T ss_pred ccccceEEEEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc-----hHHHHHHHHHHcCCCCccchhheeeecCcccc
Confidence 34567889999999999999999986 4699999999864322 234799999999999999999998543
Q ss_pred ---------------------------------CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhh
Q 013258 365 ---------------------------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSY 411 (447)
Q Consensus 365 ---------------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~y 411 (447)
...++||||++ |+|.+.+.........+++..+..++.|+++||+|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~ 156 (383)
T 3eb0_A 78 KPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGF 156 (383)
T ss_dssp --------------------------------CCEEEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH
Confidence 33789999998 58888876532233458999999999999999999
Q ss_pred hhcCCCCCeeecCCCCCceeeC-CCCceeecccc
Q 013258 412 LHEHCDPKIIHRDVKAANILLD-EDADQSSKTIL 444 (447)
Q Consensus 412 LH~~~~~~ivHrDlkp~NILl~-~~~~~~i~df~ 444 (447)
||+. +|+||||||+|||++ +++.+||+||-
T Consensus 157 LH~~---gi~H~Dikp~Nil~~~~~~~~kl~Dfg 187 (383)
T 3eb0_A 157 IHSL---GICHRDIKPQNLLVNSKDNTLKLCDFG 187 (383)
T ss_dssp HHTT---TEECSCCCGGGEEEETTTTEEEECCCT
T ss_pred HHHC---cCccCccCHHHEEEcCCCCcEEEEECC
Confidence 9999 999999999999998 68899999995
No 190
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=99.90 E-value=5.8e-24 Score=207.56 Aligned_cols=143 Identities=29% Similarity=0.469 Sum_probs=123.6
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecC--------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTV-------- 364 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-------- 364 (447)
++|+..+.||+|+||.||+|+. .+|+.||||++...... .....+.+|++++..++||||+++++++...
T Consensus 17 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 96 (351)
T 3mi9_A 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCK 96 (351)
T ss_dssp GGEEEEEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------
T ss_pred cceeEEEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCC
Confidence 4678889999999999999997 46899999998654322 2244688999999999999999999998763
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+..++||||+++ +|.+.+..... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 97 ~~~~lv~e~~~~-~l~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 169 (351)
T 3mi9_A 97 GSIYLVFDFCEH-DLAGLLSNVLV---KFTLSEIKRVMQMLLNGLYYIHRN---KILHRDMKAANVLITRDGVLKLADFG 169 (351)
T ss_dssp CEEEEEEECCSE-EHHHHHHCTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTSCEEECCCT
T ss_pred ceEEEEEeccCC-CHHHHHhhccC---CCCHHHHHHHHHHHHHHHHHHHHC---CeeCCCCCHHHEEEcCCCCEEEccch
Confidence 468999999975 78777765432 389999999999999999999999 99999999999999999999999995
No 191
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=99.90 E-value=7.9e-24 Score=202.19 Aligned_cols=145 Identities=23% Similarity=0.333 Sum_probs=123.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc---cccHHHHHHHHHHHhcCCCCCccceeeEEe--cCCce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT---SGGELQFQTEVKIISMAVHRNLLRLYGFCT--TVTEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~~E~~~l~~l~H~niv~l~~~~~--~~~~~ 367 (447)
.++|.+.+.||+|+||.||+|... +++.||+|+++.... ......+.+|+.+++.++||||+++++++. +....
T Consensus 4 ~~~y~i~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (305)
T 2wtk_C 4 IGKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKM 83 (305)
T ss_dssp -CCBCCCCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CE
T ss_pred ccceeEeeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeE
Confidence 367999999999999999999964 589999999965421 233457999999999999999999999984 45678
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||++++ |.+.+..... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+|++||-
T Consensus 84 ~lv~e~~~~~-l~~~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~---~i~H~dlkp~NIl~~~~~~~kl~dfg 154 (305)
T 2wtk_C 84 YMVMEYCVCG-MQEMLDSVPE--KRFPVCQAHGYFCQLIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALG 154 (305)
T ss_dssp EEEEECCSEE-HHHHHHHSTT--CSCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECTTCCEEECCCT
T ss_pred EEEehhccCC-HHHHHHhCcc--cccCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCcccEEEcCCCcEEeeccc
Confidence 9999999876 7777765432 3488999999999999999999999 99999999999999999999999995
No 192
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=99.90 E-value=2.5e-24 Score=209.57 Aligned_cols=141 Identities=22% Similarity=0.279 Sum_probs=124.2
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCC--CCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVH--RNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~ 371 (447)
+.|++.+.||+|+||.||++...+++.||||+++..... .....+.+|+.++..++| |||+++++++...+..++||
T Consensus 9 ~~y~i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 88 (343)
T 3dbq_A 9 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 88 (343)
T ss_dssp CEEEEEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CEEEEEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEE
Confidence 457888999999999999999888999999998654322 223468999999999987 99999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
| +.+|+|.+++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++ ++.+||+||-
T Consensus 89 e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~al~~lH~~---~iiHrDikp~NIll~-~~~~kl~DFG 152 (343)
T 3dbq_A 89 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 152 (343)
T ss_dssp C-CCSEEHHHHHHHSC----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEE-TTEEEECCCS
T ss_pred e-CCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCcceEEEE-CCcEEEeecc
Confidence 9 56889999998753 388999999999999999999999 999999999999997 6789999995
No 193
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=99.90 E-value=5.7e-25 Score=216.97 Aligned_cols=146 Identities=16% Similarity=0.183 Sum_probs=118.2
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccc--ccccHHHHHHHH---HHHhcCCCCCcccee-------eEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEER--TSGGELQFQTEV---KIISMAVHRNLLRLY-------GFC 361 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~~E~---~~l~~l~H~niv~l~-------~~~ 361 (447)
++|...+.||+|+||+||+|+. .+|+.||||+++... .......+.+|+ +.++.++|||||+++ +++
T Consensus 73 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~ 152 (377)
T 3byv_A 73 RTLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLV 152 (377)
T ss_dssp EEEEEEEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEE
T ss_pred ceEEEcceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhh
Confidence 5677789999999999999995 569999999996432 222345789999 555666899999998 655
Q ss_pred ecCC-----------------ceEEEeecCCCCChhhHhhccCCC---CCCCChHHHHHHHHHHHHHHhhhhcCCCCCee
Q 013258 362 TTVT-----------------EKLLVYPYMTNGSVASRLRERQSS---LPPLDWPTRKKIALGSARGLSYLHEHCDPKII 421 (447)
Q Consensus 362 ~~~~-----------------~~~lv~e~~~~gsL~~~l~~~~~~---~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~iv 421 (447)
...+ ..++||||+ +|+|.+++.....- ...++|..+..|+.|+++||+|||++ +|+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iv 228 (377)
T 3byv_A 153 KDPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLV 228 (377)
T ss_dssp ECTTSCSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHT---TEE
T ss_pred hccCCccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhC---Cee
Confidence 5443 278999999 68999999864210 11234578889999999999999999 999
Q ss_pred ecCCCCCceeeCCCCceeecccc
Q 013258 422 HRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 422 HrDlkp~NILl~~~~~~~i~df~ 444 (447)
||||||+|||++.++.+||+||-
T Consensus 229 HrDikp~NIll~~~~~~kL~DFG 251 (377)
T 3byv_A 229 HTYLRPVDIVLDQRGGVFLTGFE 251 (377)
T ss_dssp CSCCCGGGEEECTTCCEEECCGG
T ss_pred cCCCCHHHEEEcCCCCEEEEech
Confidence 99999999999999999999995
No 194
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=99.90 E-value=5.6e-24 Score=201.91 Aligned_cols=141 Identities=25% Similarity=0.382 Sum_probs=122.3
Q ss_pred CCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec----CCceEEE
Q 013258 297 FSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEKLLV 370 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~~lv 370 (447)
|...+.||+|+||.||+|... ++..||+|.++..... .....+.+|+.+++.++||||+++++++.. ....++|
T Consensus 28 ~~~~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv 107 (290)
T 1t4h_A 28 LKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLV 107 (290)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEE
T ss_pred EEeeeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEE
Confidence 566678999999999999864 5889999998654322 234468999999999999999999998865 3458999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC--eeecCCCCCceeeC-CCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLD-EDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILl~-~~~~~~i~df~ 444 (447)
|||+++|+|.+++.... .+++..+..++.|++.||+|||+. + |+||||||+|||++ +++.+||+||-
T Consensus 108 ~e~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~~~i~H~dikp~Nil~~~~~~~~kl~Dfg 177 (290)
T 1t4h_A 108 TELMTSGTLKTYLKRFK----VMKIKVLRSWCRQILKGLQFLHTR---TPPIIHRDLKCDNIFITGPTGSVKIGDLG 177 (290)
T ss_dssp EECCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHTS---SSCCCCSCCCGGGEEESSTTSCEEECCTT
T ss_pred EEecCCCCHHHHHHHcc----CCCHHHHHHHHHHHHHHHHHHHcC---CCCEEECCCCHHHEEEECCCCCEEEeeCC
Confidence 99999999999998753 388999999999999999999998 6 99999999999998 78999999995
No 195
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=99.90 E-value=2.7e-24 Score=204.11 Aligned_cols=143 Identities=30% Similarity=0.457 Sum_probs=122.4
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
..++|++.+.||+|+||.||+|+.. ..||||+++..... .....+.+|+++++.++||||+++++++ .....++||
T Consensus 22 ~~~~y~~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~ 98 (289)
T 3og7_A 22 PDGQITVGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVT 98 (289)
T ss_dssp CTTSCEEEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEE
T ss_pred CccceeeeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEE
Confidence 3457888899999999999999864 35999998654322 2234689999999999999999999965 456689999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++++|.+++.... ..+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 99 e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~~L~~lH~~---~i~H~Dlkp~Nil~~~~~~~kl~Dfg 165 (289)
T 3og7_A 99 QWCEGSSLYHHLHASE---TKFEMKKLIDIARQTARGMDYLHAK---SIIHRDLKSNNIFLHEDNTVKIGDFG 165 (289)
T ss_dssp ECCCEEEHHHHHTTC------CCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEEETTTEEEECCCC
T ss_pred EecCCCcHHHHHhhcc---CCCCHHHHHHHHHHHHHHHHHHHhC---CcccccCccceEEECCCCCEEEccce
Confidence 9999999999996543 2488999999999999999999999 99999999999999999999999995
No 196
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=99.90 E-value=7e-24 Score=205.40 Aligned_cols=144 Identities=28% Similarity=0.413 Sum_probs=122.6
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecC----
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTV---- 364 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~---- 364 (447)
....++|++.+.||+|+||.||+|+.. ++.||||++... ....+.+|.+++.. ++||||+++++++...
T Consensus 33 ~~~~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~----~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~ 107 (337)
T 3mdy_A 33 RTIAKQIQMVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTT----EEASWFRETEIYQTVLMRHENILGFIAADIKGTGSW 107 (337)
T ss_dssp TTHHHHCEEEEEEEEETTEEEEEEEET-TEEEEEEEEEGG----GHHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGG
T ss_pred cccccceEEEeEeecCCCeEEEEEEEC-CceEEEEEEecc----ccchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCC
Confidence 334567999999999999999999985 899999998543 22345556666554 4899999999999876
Q ss_pred CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC-----CCCeeecCCCCCceeeCCCCcee
Q 013258 365 TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC-----DPKIIHRDVKAANILLDEDADQS 439 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~-----~~~ivHrDlkp~NILl~~~~~~~ 439 (447)
...++||||+++|+|.++++.. .+++..+..++.|++.||+|||+.+ .++|+||||||+|||++.++.+|
T Consensus 108 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~k 182 (337)
T 3mdy_A 108 TQLYLITDYHENGSLYDYLKST-----TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCC 182 (337)
T ss_dssp CEEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEE
T ss_pred CceEEEEeccCCCcHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEE
Confidence 6789999999999999999764 3899999999999999999999762 44899999999999999999999
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 183 l~Dfg 187 (337)
T 3mdy_A 183 IADLG 187 (337)
T ss_dssp ECCCT
T ss_pred EEeCC
Confidence 99996
No 197
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=99.90 E-value=1.2e-23 Score=199.96 Aligned_cols=144 Identities=23% Similarity=0.347 Sum_probs=124.3
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEeecC
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e~~ 374 (447)
+|.....||+|+||.||+|+. .+++.||||.++... ......+.+|+.+++.++||||+++++++...+..++||||+
T Consensus 23 ~~~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 101 (295)
T 2clq_A 23 ENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERD-SRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQV 101 (295)
T ss_dssp TTSSBCEEEECSSSEEEEEEETTTCCEEEEEEEECCC-C---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred CCCCcEEEeecCcEEEEEEEECCCCeEEEEEEccCCc-hHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeC
Confidence 455557899999999999996 468899999986543 233457899999999999999999999999999999999999
Q ss_pred CCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-CCceeecccc
Q 013258 375 TNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE-DADQSSKTIL 444 (447)
Q Consensus 375 ~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~-~~~~~i~df~ 444 (447)
++++|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++. ++.+||+||-
T Consensus 102 ~~~~L~~~l~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~~kl~Dfg 168 (295)
T 2clq_A 102 PGGSLSALLRSKWG-PLKDNEQTIGFYTKQILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFG 168 (295)
T ss_dssp SEEEHHHHHHHTTC-CCTTCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTCCEEECCTT
T ss_pred CCCCHHHHHHhhcc-CCCccHHHHHHHHHHHHHHHHHHHhC---CEEccCCChhhEEEECCCCCEEEeecc
Confidence 99999999986532 23467888999999999999999999 9999999999999998 8999999995
No 198
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=99.90 E-value=7.1e-24 Score=205.88 Aligned_cols=141 Identities=28% Similarity=0.403 Sum_probs=125.2
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhc--CCCCCccceeeEEecCC---
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISM--AVHRNLLRLYGFCTTVT--- 365 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~--l~H~niv~l~~~~~~~~--- 365 (447)
....++|...+.||+|+||.||+|+. +++.||||+++.. ....+.+|++++.. ++||||+++++++....
T Consensus 38 ~~~~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~----~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~ 112 (342)
T 1b6c_B 38 RTIARTIVLQESIGKGRFGEVWRGKW-RGEEVAVKIFSSR----EERSWFREAEIYQTVMLRHENILGFIAADNKDNGTW 112 (342)
T ss_dssp HHHHHHCEEEEEEEEETTEEEEEEEE-TTEEEEEEEECGG----GHHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSC
T ss_pred ccccccEEEEeeecCCCCcEEEEEEE-cCccEEEEEeCch----hHHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCcc
Confidence 44557899999999999999999998 5899999998543 23467888888876 79999999999998776
Q ss_pred -ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh--------cCCCCCeeecCCCCCceeeCCCC
Q 013258 366 -EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--------EHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 366 -~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--------~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
..++||||+++|+|.+++... .+++..+..++.|++.||+||| +. +|+||||||+|||+++++
T Consensus 113 ~~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~---~ivH~Dlkp~NIll~~~~ 184 (342)
T 1b6c_B 113 TQLWLVSDYHEHGSLFDYLNRY-----TVTVEGMIKLALSTASGLAHLHMEIVGTQGKP---AIAHRDLKSKNILVKKNG 184 (342)
T ss_dssp CCEEEEECCCTTCBHHHHHHHC-----CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBC---EEECSCCSGGGEEECTTS
T ss_pred ceeEEEEeecCCCcHHHHHhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhcccC---CeeeCCCCHHHEEECCCC
Confidence 789999999999999999764 3899999999999999999999 66 999999999999999999
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+||+||-
T Consensus 185 ~~kL~Dfg 192 (342)
T 1b6c_B 185 TCCIADLG 192 (342)
T ss_dssp CEEECCCT
T ss_pred CEEEEECC
Confidence 99999995
No 199
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=99.90 E-value=3.3e-24 Score=213.09 Aligned_cols=139 Identities=23% Similarity=0.303 Sum_probs=117.9
Q ss_pred cCCCCC-CccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHH-hcCCCCCccceeeEEec----CCce
Q 013258 295 DGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLLRLYGFCTT----VTEK 367 (447)
Q Consensus 295 ~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 367 (447)
++|... +.||+|+||+||+|+.. +++.||||+++.. ..+.+|+.++ ...+||||+++++++.. ....
T Consensus 61 ~~y~~~~~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~------~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~ 134 (400)
T 1nxk_A 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDC------PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 134 (400)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECS------HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred ccceeccceeeeccCeEEEEEEECCCCCEEEEEEeCcc------hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEE
Confidence 345554 68999999999999965 5899999998532 3577888887 45589999999998865 5568
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+||-
T Consensus 135 ~lv~E~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~~~kl~DFG 209 (400)
T 1nxk_A 135 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 209 (400)
T ss_dssp EEEEECCCSEEHHHHHHCC-----CCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEEeCCCCcHHHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCcCcceEEEecCCCCccEEEEecc
Confidence 999999999999999986432 3489999999999999999999999 9999999999999998 7889999995
No 200
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=99.90 E-value=4e-24 Score=204.37 Aligned_cols=143 Identities=24% Similarity=0.392 Sum_probs=125.5
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~e 372 (447)
.++|...+.||+|+||.||+|+.. +|+.||+|.++.... .....+.+|+.++..++||||+++++++...+..++|||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 86 (304)
T 2jam_A 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPA-FRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQ 86 (304)
T ss_dssp HHHEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECC-------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred hccceeeeeccCCCCceEEEEEECCCCCEEEEEEEecccc-cchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEE
Confidence 356888899999999999999965 689999999965432 233468899999999999999999999999999999999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
|+++|+|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+||++ ++++.+|++||-
T Consensus 87 ~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dikp~NIl~~~~~~~~~~kl~Dfg 154 (304)
T 2jam_A 87 LVSGGELFDRILERG----VYTEKDASLVIQQVLSAVKYLHEN---GIVHRDLKPENLLYLTPEENSKIMITDFG 154 (304)
T ss_dssp CCCSCBHHHHHHHHS----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCSCCGGGCEESSSSTTCCEEBCSCS
T ss_pred cCCCccHHHHHHHcC----CCCHHHHHHHHHHHHHHHHHHHHC---CccccCCCHHHEEEecCCCCCCEEEccCC
Confidence 999999999987653 388999999999999999999999 99999999999999 788899999995
No 201
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=99.90 E-value=2.9e-24 Score=203.65 Aligned_cols=148 Identities=22% Similarity=0.262 Sum_probs=121.7
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHH-HHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||.||+|+. .+++.||||+++.........+ +.++...++.++||||+++++++...+..++||
T Consensus 6 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~ 85 (290)
T 3fme_A 6 ADDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICM 85 (290)
T ss_dssp GGGEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEE
T ss_pred HHhhhhHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEE
Confidence 46788889999999999999996 4689999999975533323333 445555688899999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++ |+|.+++.........+++..+..++.|++.||+|||+++ +|+||||||+||+++.++.+||+||-
T Consensus 86 e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~--~i~H~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T 3fme_A 86 ELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFG 155 (290)
T ss_dssp ECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHS--CCCCCCCSGGGCEECTTCCEEBCCC-
T ss_pred ehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhhcC--CeecCCCCHHHEEECCCCCEEEeecC
Confidence 9997 5888887653223345899999999999999999999842 79999999999999999999999995
No 202
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=99.90 E-value=4.5e-24 Score=209.53 Aligned_cols=142 Identities=21% Similarity=0.297 Sum_probs=124.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 367 (447)
.++|+..+.||+|+||.||+|+.. +++.||||+++..........+.+|++++..++||||+++++++... ...
T Consensus 26 ~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 105 (364)
T 3qyz_A 26 GPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDV 105 (364)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCE
T ss_pred cccEEEEEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceE
Confidence 357888899999999999999964 68899999997543333345789999999999999999999998764 368
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 106 ~iv~e~~~-~~L~~~l~~~-----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIl~~~~~~~kl~Dfg 173 (364)
T 3qyz_A 106 YIVQDLME-TDLYKLLKTQ-----HLSNDHICYFLYQILRGLKYIHSA---NVLHRDLKPSNLLLNTTCDLKICDFG 173 (364)
T ss_dssp EEEEECCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEcccC-cCHHHHHHhC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCChHhEEECCCCCEEEEeCc
Confidence 99999997 5999998763 288999999999999999999999 99999999999999999999999995
No 203
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=99.90 E-value=8.5e-24 Score=202.91 Aligned_cols=143 Identities=29% Similarity=0.450 Sum_probs=123.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
..++|+..+.||+|+||.||+|+.. +|+.||||.++... ....+.+|+.++..++||||+++++++...+..++||
T Consensus 27 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 103 (314)
T 3com_A 27 PEEVFDVLEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES---DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVM 103 (314)
T ss_dssp ---CEEEEEECC----CEEEEEEETTTCCEEEEEEEETTS---CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEE
T ss_pred chhhhhhheeeccCCCeEEEEEEECCCCCEEEEEecCchH---HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEe
Confidence 3467888999999999999999975 58999999986532 3457899999999999999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++..... .+++..+..++.|++.||.|||+. +|+||||||+||+++.++.+||+||.
T Consensus 104 e~~~~~~L~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~---~i~H~dl~p~Nil~~~~~~~kl~dfg 170 (314)
T 3com_A 104 EYCGAGSVSDIIRLRNK---TLTEDEIATILQSTLKGLEYLHFM---RKIHRDIKAGNILLNTEGHAKLADFG 170 (314)
T ss_dssp ECCTTEEHHHHHHHHTC---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECTTCCEEECCCT
T ss_pred ecCCCCCHHHHHHhcCC---CCCHHHHHHHHHHHHHHHHHHHhC---CCcCCCcCHHHEEECCCCCEEEeecc
Confidence 99999999999974322 388999999999999999999999 99999999999999999999999995
No 204
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=99.90 E-value=5.2e-24 Score=207.83 Aligned_cols=142 Identities=22% Similarity=0.364 Sum_probs=124.6
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-----Cce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-----TEK 367 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-----~~~ 367 (447)
.++|+..+.||+|+||.||+|+.. +|+.||||.++.........++.+|+++++.++||||+++++++... ...
T Consensus 10 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 89 (353)
T 2b9h_A 10 SSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEV 89 (353)
T ss_dssp CTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCE
T ss_pred ccceEEeeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceE
Confidence 357888899999999999999965 68999999996543333345688999999999999999999987654 678
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+. |+|.+++... .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 90 ~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~L~~LH~~---~ivH~Dlkp~Nil~~~~~~~kl~Dfg 157 (353)
T 2b9h_A 90 YIIQELMQ-TDLHRVISTQ-----MLSDDHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFG 157 (353)
T ss_dssp EEEECCCS-EEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECTTCCEEECCCT
T ss_pred EEEEeccC-ccHHHHHhhc-----CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEcCCCcEEEEecc
Confidence 99999997 6999998763 388999999999999999999999 99999999999999999999999995
No 205
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=99.90 E-value=2.5e-24 Score=211.32 Aligned_cols=144 Identities=16% Similarity=0.211 Sum_probs=118.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCC------CcEEEEEEcccccccc----------cHHHHHHHHHHHhcCCCCCccce
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLAD------GKLVAVKRLKEERTSG----------GELQFQTEVKIISMAVHRNLLRL 357 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~------~~~vavK~~~~~~~~~----------~~~~~~~E~~~l~~l~H~niv~l 357 (447)
.++|.+.+.||+|+||.||+|++.+ ++.||||++....... ....+..|+..+..++||||+++
T Consensus 34 ~~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~ 113 (364)
T 3op5_A 34 AAAWKVGLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKY 113 (364)
T ss_dssp CCEEEEEEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCE
T ss_pred CCeEEEEEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeE
Confidence 4578888999999999999998754 4789999985432110 01124456667788899999999
Q ss_pred eeEEecC----CceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC
Q 013258 358 YGFCTTV----TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD 433 (447)
Q Consensus 358 ~~~~~~~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~ 433 (447)
++++... ...++||||+ +++|.+++.... ..+++..+..++.|++.||+|||++ +|+||||||+|||++
T Consensus 114 ~~~~~~~~~~~~~~~lv~e~~-g~~L~~~~~~~~---~~l~~~~~~~i~~qi~~~l~~lH~~---~iiHrDlkp~Nill~ 186 (364)
T 3op5_A 114 WGSGLHDKNGKSYRFMIMDRF-GSDLQKIYEANA---KRFSRKTVLQLSLRILDILEYIHEH---EYVHGDIKASNLLLN 186 (364)
T ss_dssp EEEEEEEETTEEEEEEEEECE-EEEHHHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEEE
T ss_pred EeeeeeccCCcceEEEEEeCC-CCCHHHHHHhcc---CCCCHHHHHHHHHHHHHHHHHHHHC---CeEEecCCHHHEEEe
Confidence 9998764 4479999999 999999998743 2489999999999999999999999 999999999999999
Q ss_pred --CCCceeecccc
Q 013258 434 --EDADQSSKTIL 444 (447)
Q Consensus 434 --~~~~~~i~df~ 444 (447)
.++.+||+||-
T Consensus 187 ~~~~~~~kl~DFG 199 (364)
T 3op5_A 187 YKNPDQVYLVDYG 199 (364)
T ss_dssp SSCTTCEEECCCT
T ss_pred cCCCCeEEEEECC
Confidence 88999999995
No 206
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=99.90 E-value=2.6e-24 Score=202.86 Aligned_cols=142 Identities=28% Similarity=0.435 Sum_probs=123.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC-CceEEEee
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV-TEKLLVYP 372 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~-~~~~lv~e 372 (447)
.++|+..+.||+|+||.||+|+.. |+.||||.++... ....+.+|++++..++||||+++++++.+. +..++|||
T Consensus 20 ~~~y~~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e 95 (278)
T 1byg_A 20 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA---TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTE 95 (278)
T ss_dssp GGGEEEEEEEEECSSCEEEEEEET-TEEEEEEECCCCC-----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEEC
T ss_pred hhhceEEeEEecCCCceEEEEEEc-CCEEEEEEecchh---HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEe
Confidence 356788899999999999999874 8899999986532 345789999999999999999999987654 47899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+++|+|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+||++++++.+||+||-
T Consensus 96 ~~~~~~L~~~l~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~l~Dfg 162 (278)
T 1byg_A 96 YMAKGSLVDYLRSRGR--SVLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFG 162 (278)
T ss_dssp CCTTEEHHHHHHHHHH--HHCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEECTTSCEEECCCC
T ss_pred cCCCCCHHHHHHhccc--ccCCHHHHHHHHHHHHHHHHHHHhC---CccccCCCcceEEEeCCCcEEEeecc
Confidence 9999999999976421 1268889999999999999999999 99999999999999999999999995
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=99.90 E-value=9.5e-24 Score=204.03 Aligned_cols=136 Identities=23% Similarity=0.311 Sum_probs=121.9
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEec--CCceEEE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTT--VTEKLLV 370 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~--~~~~~lv 370 (447)
++|++.+.||+|+||.||+|+. .+++.||||+++.. ....+.+|+.++..++ ||||+++++++.. ....++|
T Consensus 36 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~----~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv 111 (330)
T 3nsz_A 36 DDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPV----KKKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALV 111 (330)
T ss_dssp GGEEEEEEEEECSSEEEEEEEETTTCCEEEEEEECSC----CHHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEE
T ss_pred CceEEEEEecccCCeEEEEEEECCCCcEEEEEEeccc----chHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEE
Confidence 5678889999999999999985 46899999998642 3457899999999997 9999999999987 5678999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC-ceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA-DQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~-~~~i~df~ 444 (447)
|||+.+++|.+++.. +++..+..++.|++.||+|||++ +|+||||||+|||++.++ .+||+||-
T Consensus 112 ~e~~~~~~l~~~~~~-------~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dikp~Nil~~~~~~~~kl~Dfg 176 (330)
T 3nsz_A 112 FEHVNNTDFKQLYQT-------LTDYDIRFYMYEILKALDYCHSM---GIMHRDVKPHNVMIDHEHRKLRLIDWG 176 (330)
T ss_dssp EECCCCCCHHHHGGG-------CCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECCCT
T ss_pred EeccCchhHHHHHHh-------CCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHEEEcCCCCEEEEEeCC
Confidence 999999999998853 78889999999999999999999 999999999999999777 89999995
No 208
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=99.90 E-value=6e-24 Score=210.55 Aligned_cols=141 Identities=22% Similarity=0.275 Sum_probs=123.7
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCC--CCCccceeeEEecCCceEEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV--HRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~lv~ 371 (447)
++|++.+.||+|+||.||+|...+++.||||+++..... .....+.+|+.++..++ ||||+++++++...+..++||
T Consensus 56 ~~y~~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~ 135 (390)
T 2zmd_A 56 RIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVM 135 (390)
T ss_dssp EEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred CceEEEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEE
Confidence 458888999999999999999878999999998654322 23356899999999996 599999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
| +.+++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++ ++.+||+||-
T Consensus 136 E-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~lH~~---~ivHrDlkp~NIll~-~~~~kl~DFG 199 (390)
T 2zmd_A 136 E-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIV-DGMLKLIDFG 199 (390)
T ss_dssp E-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHTT---TCCCCCCCGGGEEES-SSCEEECCCS
T ss_pred e-cCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCCHHHEEEE-CCeEEEEecC
Confidence 9 56889999998753 378899999999999999999999 999999999999996 5889999995
No 209
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=99.90 E-value=1.2e-23 Score=200.25 Aligned_cols=141 Identities=18% Similarity=0.218 Sum_probs=124.8
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|++.+.||+|+||.||+|+. .+++.||||+++... ....+.+|+..+..+ +|+|++++++++......++||
T Consensus 9 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~ 85 (298)
T 1csn_A 9 GVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRS---DAPQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVI 85 (298)
T ss_dssp TTTEEEEEEEEECSSCEEEEEEETTTTEEEEEEEEECCT---TSCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEE
T ss_pred ccceEEEEEEeecCCEEEEEEEECCCCcEEEEEEeccCC---ccHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEE
Confidence 35688889999999999999995 568999999985432 223578899999999 7999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc-----eeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD-----QSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~-----~~i~df~ 444 (447)
||+ +++|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++. +||+||-
T Consensus 86 e~~-~~~L~~~l~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg 156 (298)
T 1csn_A 86 DLL-GPSLEDLLDLCGR---KFSVKTVAMAAKQMLARVQSIHEK---SLVYRDIKPDNFLIGRPNSKNANMIYVVDFG 156 (298)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred Eec-CCCHHHHHHHhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence 999 9999999986532 389999999999999999999999 9999999999999988876 9999995
No 210
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=99.90 E-value=1.8e-24 Score=208.78 Aligned_cols=147 Identities=31% Similarity=0.468 Sum_probs=128.4
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEec-----
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTT----- 363 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~----- 363 (447)
....++|++.+.||+|+||.||+|+. .+++.||||++.... .....+.+|+.++..+ +||||+++++++..
T Consensus 20 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~ 97 (326)
T 2x7f_A 20 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTG--DEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPG 97 (326)
T ss_dssp CCCTTTEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEECCS--STTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--C
T ss_pred cCCCCcEEEEEEeccCCCEEEEEEEECCCCCeEEEEEEecCc--ccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCcc
Confidence 34567788899999999999999996 468999999986432 2345789999999998 89999999999976
Q ss_pred -CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecc
Q 013258 364 -VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKT 442 (447)
Q Consensus 364 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~d 442 (447)
.+..++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+|
T Consensus 98 ~~~~~~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~kl~D 172 (326)
T 2x7f_A 98 MDDQLWLVMEFCGAGSVTDLIKNTKG--NTLKEEWIAYICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVD 172 (326)
T ss_dssp CCCEEEEEEECCTTEEHHHHHHHSGG--GCCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCSGGGEEECTTCCEEECC
T ss_pred ccceEEEEEEcCCCCcHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCcHHHEEEcCCCCEEEee
Confidence 4578999999999999999986422 2488899999999999999999999 999999999999999999999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 173 fg 174 (326)
T 2x7f_A 173 FG 174 (326)
T ss_dssp CT
T ss_pred Cc
Confidence 95
No 211
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=99.90 E-value=6.2e-24 Score=205.88 Aligned_cols=141 Identities=33% Similarity=0.513 Sum_probs=116.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHH--HhcCCCCCccceeeEEec-----CCc
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKI--ISMAVHRNLLRLYGFCTT-----VTE 366 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~--l~~l~H~niv~l~~~~~~-----~~~ 366 (447)
.++|+..+.||+|+||.||+|+. +++.||||+++... ...+..|.++ +..++||||+++++++.. ...
T Consensus 12 ~~~y~~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~----~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 86 (336)
T 3g2f_A 12 LDNLKLLELIGRGRYGAVYKGSL-DERPVAVKVFSFAN----RQNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRME 86 (336)
T ss_dssp TTSEEEEEEEEECSSEEEEEEEE-TTEEEEEEEEEGGG----HHHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEE
T ss_pred hHHhheeeecccCCCeEEEEEEE-CCeEEEEEEeeccc----hhhHHHHHHHHHHHhccCcchhhheecccccccCCCce
Confidence 35788889999999999999987 68999999985432 2334444444 456899999999986542 235
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC------CCCeeecCCCCCceeeCCCCceee
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC------DPKIIHRDVKAANILLDEDADQSS 440 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------~~~ivHrDlkp~NILl~~~~~~~i 440 (447)
.++||||+++|+|.+++.... .++..+..++.|+++||+|||+.+ .++|+||||||+|||++.++.+||
T Consensus 87 ~~lv~e~~~~g~L~~~l~~~~-----~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL 161 (336)
T 3g2f_A 87 YLLVMEYYPNGSLXKYLSLHT-----SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVI 161 (336)
T ss_dssp EEEEECCCTTCBHHHHHHHCC-----BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEE
T ss_pred EEEEEecCCCCcHHHHHhhcc-----cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEE
Confidence 689999999999999997643 588999999999999999999863 348999999999999999999999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||-
T Consensus 162 ~DFG 165 (336)
T 3g2f_A 162 SDFG 165 (336)
T ss_dssp CCCT
T ss_pred eecc
Confidence 9995
No 212
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=99.90 E-value=5.7e-24 Score=208.98 Aligned_cols=141 Identities=24% Similarity=0.344 Sum_probs=113.9
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecC------Cc
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTV------TE 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~------~~ 366 (447)
++|+..+.||+|+||.||+|.. .+|+.||||++..... ......+.+|+++++.++||||+++++++... ..
T Consensus 29 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~ 108 (367)
T 2fst_X 29 ERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFND 108 (367)
T ss_dssp TTEEEEEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred CceEEeeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCe
Confidence 6788889999999999999985 4689999999865322 22344688999999999999999999998654 56
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++|+||+ +++|.+++... .+++..+..++.|+++||+|||+. +|+||||||+|||+++++.+||+||-
T Consensus 109 ~~lv~e~~-~~~L~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~---givH~Dlkp~NIll~~~~~~kL~DFG 177 (367)
T 2fst_X 109 VYLVTHLM-GADLNNIVKCQ-----KLTDDHVQFLIYQILRGLKYIHSA---DIIHRDLKPSNLAVNEDCELKILDFG 177 (367)
T ss_dssp CEEEEECC-CEECC-----C-----CCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEECC--
T ss_pred EEEEeccc-CCCHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHC---CeeeCCCCHhhEEECCCCCEEEeecc
Confidence 79999999 78999888652 389999999999999999999999 99999999999999999999999995
No 213
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=99.90 E-value=8.7e-24 Score=204.35 Aligned_cols=149 Identities=22% Similarity=0.281 Sum_probs=128.0
Q ss_pred HHHhcCCCCC-CccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCC-CCCccceeeEEecCCc
Q 013258 291 QVATDGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTE 366 (447)
Q Consensus 291 ~~~~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~ 366 (447)
+...+.|.+. +.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.++..++ ||||+++++++...+.
T Consensus 24 ~~~~~~y~~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~ 103 (327)
T 3lm5_A 24 ENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSE 103 (327)
T ss_dssp HHHHHHEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSE
T ss_pred HhhhhEEeeccceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCe
Confidence 3445566666 88999999999999965 5899999998654332 23457899999999985 6999999999999999
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeeccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTI 443 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df 443 (447)
.++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++. ++.+||+||
T Consensus 104 ~~lv~e~~~~~~L~~~~~~~~~--~~~~~~~~~~i~~ql~~~L~~LH~~---givH~Dikp~NIl~~~~~~~~~~kL~Df 178 (327)
T 3lm5_A 104 IILILEYAAGGEIFSLCLPELA--EMVSENDVIRLIKQILEGVYYLHQN---NIVHLDLKPQNILLSSIYPLGDIKIVDF 178 (327)
T ss_dssp EEEEEECCTTEEGGGGGSSCC---CCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEESCBTTBCCEEECCG
T ss_pred EEEEEEecCCCcHHHHHHHhcc--cCCCHHHHHHHHHHHHHHHHHHHHC---CeecCcCChHHEEEecCCCCCcEEEeeC
Confidence 9999999999999999865422 3489999999999999999999999 9999999999999998 789999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 179 g 179 (327)
T 3lm5_A 179 G 179 (327)
T ss_dssp G
T ss_pred c
Confidence 5
No 214
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=99.90 E-value=4.1e-24 Score=226.71 Aligned_cols=140 Identities=21% Similarity=0.337 Sum_probs=120.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC--CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc-----e
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA--DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE-----K 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~-----~ 367 (447)
++|++.+.||+|+||.||+|+.. +++.||||.+...........+.+|++++..++||||+++++++...+. .
T Consensus 80 ~~y~i~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~ 159 (681)
T 2pzi_A 80 GQYEVKGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVG 159 (681)
T ss_dssp TTEEEEEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEE
T ss_pred CceEEEEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCcee
Confidence 57888899999999999999975 5899999998654333334568999999999999999999999987665 6
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+++++|.+++.. .++|..+..++.|+++||+|||++ +||||||||+|||++++ .+||+||-
T Consensus 160 ~lv~E~~~g~~L~~~~~~------~l~~~~~~~~~~qi~~aL~~lH~~---giiHrDlkp~NIll~~~-~~kl~DFG 226 (681)
T 2pzi_A 160 YIVMEYVGGQSLKRSKGQ------KLPVAEAIAYLLEILPALSYLHSI---GLVYNDLKPENIMLTEE-QLKLIDLG 226 (681)
T ss_dssp EEEEECCCCEECC----C------CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEECSS-CEEECCCT
T ss_pred EEEEEeCCCCcHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHC---CCeecccChHHeEEeCC-cEEEEecc
Confidence 999999999999887654 389999999999999999999999 99999999999999986 89999995
No 215
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=99.90 E-value=8.2e-24 Score=222.76 Aligned_cols=145 Identities=23% Similarity=0.312 Sum_probs=126.1
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCC----CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLAD----GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
..++|+..+.||+|+||.||+|++.. +..||||.++..........+.+|+.+++.++||||+++++++. .+..+
T Consensus 388 ~~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~ 466 (656)
T 2j0j_A 388 QRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVW 466 (656)
T ss_dssp CGGGEEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCE
T ss_pred ccccEEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceE
Confidence 34667888999999999999998642 46799999875443333457999999999999999999999985 46689
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+||||+++|+|.++++.... .+++..+..++.|+++||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 467 lv~E~~~~g~L~~~l~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~---givHrDikp~NILl~~~~~vkL~DFG 536 (656)
T 2j0j_A 467 IIMELCTLGELRSFLQVRKF---SLDLASLILYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFG 536 (656)
T ss_dssp EEEECCTTCBHHHHHHHTTT---TCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCSGGGEEEEETTEEEECCCC
T ss_pred EEEEcCCCCcHHHHHHhccC---CCCHHHHHHHHHHHHHHHHHHHhC---CccccccchHhEEEeCCCCEEEEecC
Confidence 99999999999999986532 388999999999999999999999 99999999999999999999999995
No 216
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=99.90 E-value=1.1e-23 Score=200.91 Aligned_cols=139 Identities=23% Similarity=0.303 Sum_probs=120.4
Q ss_pred cCCCCC-CccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHH-hcCCCCCccceeeEEec----CCce
Q 013258 295 DGFSNK-NILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKII-SMAVHRNLLRLYGFCTT----VTEK 367 (447)
Q Consensus 295 ~~~~~~-~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l-~~l~H~niv~l~~~~~~----~~~~ 367 (447)
++|... +.||+|+||.||+|+. .+++.||+|+++. ...+.+|+.++ +..+||||+++++++.. ....
T Consensus 17 ~~y~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~------~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 90 (299)
T 3m2w_A 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQD------CPKARREVELHWRASQCPHIVRIVDVYENLYAGRKCL 90 (299)
T ss_dssp GTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEC------SHHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cchhhcCcccccCCCeEEEEEEEcCCCcEEEEEEecc------cHHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceE
Confidence 455555 7799999999999996 4689999999853 23577888887 66699999999999876 6678
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC---CCceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE---DADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~---~~~~~i~df~ 444 (447)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+|||++. ++.+||+||-
T Consensus 91 ~lv~e~~~~~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg 165 (299)
T 3m2w_A 91 LIVMECLDGGELFSRIQDRGD--QAFTEREASEIMKSIGEAIQYLHSI---NIAHRDVKPENLLYTSKRPNAILKLTDFG 165 (299)
T ss_dssp EEEECCCCSCBHHHHHHHCTT--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEESSSSTTCCEEECCCT
T ss_pred EEEEeecCCCcHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHhC---CcccCCCCHHHEEEecCCCCCcEEEeccc
Confidence 999999999999999987532 2489999999999999999999999 9999999999999998 7889999995
No 217
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=99.90 E-value=2.1e-23 Score=197.72 Aligned_cols=145 Identities=23% Similarity=0.388 Sum_probs=128.3
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
..++|++.+.||+|+||.||+|+.. +++.||||+++.... ......+.+|+++++.++||||+++++++...+..++|
T Consensus 20 ~~~~y~i~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 99 (287)
T 2wei_A 20 FAERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIV 99 (287)
T ss_dssp HHHHEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEE
T ss_pred HhhcceeeEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEE
Confidence 3467899999999999999999975 689999999865432 33455799999999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC---ceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA---DQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~---~~~i~df~ 444 (447)
+||+++++|.+.+.... .+++..+..++.|++.||+|||+. +|+||||||+||+++.++ .+|++||-
T Consensus 100 ~e~~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~~l~~LH~~---~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg 169 (287)
T 2wei_A 100 GELYTGGELFDEIIKRK----RFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDIKIIDFG 169 (287)
T ss_dssp ECCCCSCBHHHHHHHHS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEESCSSTTCCEEECSTT
T ss_pred EEccCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeccCCChhhEEEecCCCcccEEEeccC
Confidence 99999999999887653 388999999999999999999999 999999999999997644 69999995
No 218
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=99.89 E-value=1.3e-23 Score=206.82 Aligned_cols=140 Identities=22% Similarity=0.293 Sum_probs=121.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEecCC------c
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTTVT------E 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~------~ 366 (447)
++|+..+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+.+++.++||||+++++++...+ .
T Consensus 25 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~ 104 (371)
T 2xrw_A 25 KRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQD 104 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCE
T ss_pred hheeEeeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccc
Confidence 57888899999999999999864 5899999998643222 22346889999999999999999999997654 6
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+. |+|.+.+.. .+++..+..++.|++.||+|||++ +|+||||||+|||++.++.+||+||-
T Consensus 105 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~lH~~---~ivH~Dlkp~NIl~~~~~~~kl~Dfg 172 (371)
T 2xrw_A 105 VYIVMELMD-ANLCQVIQM------ELDHERMSYLLYQMLCGIKHLHSA---GIIHRDLKPSNIVVKSDCTLKILDFG 172 (371)
T ss_dssp EEEEEECCS-EEHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTSCEEECCCC
T ss_pred eEEEEEcCC-CCHHHHHhh------ccCHHHHHHHHHHHHHHHHHHHHC---CeecccCCHHHEEEcCCCCEEEEEee
Confidence 799999997 478888753 278999999999999999999999 99999999999999999999999995
No 219
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=99.89 E-value=8.5e-24 Score=200.49 Aligned_cols=143 Identities=34% Similarity=0.434 Sum_probs=116.4
Q ss_pred cCCCCCCccccCCCceEEEEEeC--CCc--EEEEEEcccccc--cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA--DGK--LVAVKRLKEERT--SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~--~~~--~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~ 368 (447)
++|+..+.||+|+||.||+|++. +++ .||||+++.... ......+.+|++++..++||||+++++++...+ .+
T Consensus 18 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~ 96 (291)
T 1u46_A 18 KDLRLLEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MK 96 (291)
T ss_dssp GGEEEEEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CE
T ss_pred hHeeeeeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ce
Confidence 56788899999999999999853 333 689999865432 223457899999999999999999999988754 89
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+|+||+++|+|.+++..... .+++..+..++.|+++||+|||++ +|+||||||+||+++.++.+||+||-
T Consensus 97 ~v~e~~~~~~L~~~l~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~---~i~H~dikp~Nili~~~~~~kl~Dfg 166 (291)
T 1u46_A 97 MVTELAPLGSLLDRLRKHQG---HFLLGTLSRYAVQVAEGMGYLESK---RFIHRDLAARNLLLATRDLVKIGDFG 166 (291)
T ss_dssp EEEECCTTCBHHHHHHHHGG---GSCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEEEETTEEEECCCT
T ss_pred eeEecccCCCHHHHHHhccC---CcCHHHHHHHHHHHHHHHHHHHhC---CcccCCCchheEEEcCCCCEEEcccc
Confidence 99999999999999986432 388999999999999999999999 99999999999999999999999995
No 220
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.89 E-value=2.2e-23 Score=224.12 Aligned_cols=175 Identities=30% Similarity=0.385 Sum_probs=138.9
Q ss_pred HhcccCchHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCccceeEeCCCCCEEEEEcCCCCcccc---cc----------
Q 013258 18 ALPMISANAEVDALYIFKSKLQDPNNSLQSWDNLPGNLCTWFHITCNPEGSVTRVDLGNAALSGE---LA---------- 84 (447)
Q Consensus 18 ~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~~~~c~w~gv~c~~~~~v~~l~L~~~~l~g~---~~---------- 84 (447)
+++..+.+.|++||+.||+++.||. .+.+|+. +.+||.|.||+|+ .++|+.|||+++.+.|. +|
T Consensus 4 ~~~~~~~~~~~~all~~k~~~~~~~-~l~~W~~-~~~~C~w~gv~C~-~~~v~~L~L~~~~l~g~~~~l~~~l~~L~~L~ 80 (768)
T 3rgz_A 4 ASPSQSLYREIHQLISFKDVLPDKN-LLPDWSS-NKNPCTFDGVTCR-DDKVTSIDLSSKPLNVGFSAVSSSLLSLTGLE 80 (768)
T ss_dssp ----CCHHHHHHHHHHHHTTCSCTT-SSTTCCT-TSCGGGSTTEEEE-TTEEEEEECTTSCCCEEHHHHHHHTTTCTTCC
T ss_pred CccccCCHHHHHHHHHHHhhCCCcc-cccCCCC-CCCCcCCcceEEC-CCcEEEEECCCCCcCCccCccChhHhccCccc
Confidence 4455667889999999999999998 8999973 5789999999999 78999999999999987 55
Q ss_pred -------------ccccCCCCCCEEECCCCccCCCCCh--hhcCCCCCcEEEccCCcccccCCccc-cCCCCCCeeeCcC
Q 013258 85 -------------PELGQLKNLELLELYGNNLSGHIPS--ALGNLIKLKSLDLYSNLFNGTIPDTL-ANLKQLKYLRLNN 148 (447)
Q Consensus 85 -------------~~l~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~ls~N~l~g~~p~~~-~~l~~L~~L~l~~ 148 (447)
+.++.+++|++|+|++|.++|.+|. .++++++|++|+|++|.+.+.+|..+ .++++|++|+|++
T Consensus 81 ~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~Ls~ 160 (768)
T 3rgz_A 81 SLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEVLDLSA 160 (768)
T ss_dssp EEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSEEECCS
T ss_pred ccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCEEECCC
Confidence 4677788899999999999988888 88999999999999999988888776 7888888888888
Q ss_pred ccccccCchH---HhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 149 NSLSGLIPTS---LTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 149 N~l~~~~p~~---~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
|++++..|.. +..+++|+.|++++|.+++.+|. ..+..++.+++.+|
T Consensus 161 n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-~~l~~L~~L~Ls~n 210 (768)
T 3rgz_A 161 NSISGANVVGWVLSDGCGELKHLAISGNKISGDVDV-SRCVNLEFLDVSSN 210 (768)
T ss_dssp SCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBC-TTCTTCCEEECCSS
T ss_pred CccCCcCChhhhhhccCCCCCEEECCCCcccccCCc-ccCCcCCEEECcCC
Confidence 8888887776 56666677777777766665554 33444444444444
No 221
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=99.89 E-value=2.1e-23 Score=200.33 Aligned_cols=140 Identities=26% Similarity=0.377 Sum_probs=115.9
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEe-----------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCT----------- 362 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~----------- 362 (447)
++|...+.||+|+||.||+|+.. +++.||||.+.... .....++.+|+++++.++||||+++++++.
T Consensus 11 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 89 (320)
T 2i6l_A 11 SRYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTD-PQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVG 89 (320)
T ss_dssp TTEEEEEECC-----CEEEEEETTTTEEEEEEEEECCS-HHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC---
T ss_pred CceeEEEEeccCCCeEEEEEEECCCCeEEEEEEEecCC-hHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccc
Confidence 56888899999999999999976 48999999986432 223456899999999999999999999874
Q ss_pred ---cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-CCCce
Q 013258 363 ---TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQ 438 (447)
Q Consensus 363 ---~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ 438 (447)
.....++||||++ |+|.+++... .+++..+..++.|+++||+|||++ +|+||||||+|||++ +++.+
T Consensus 90 ~~~~~~~~~lv~e~~~-~~L~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 160 (320)
T 2i6l_A 90 SLTELNSVYIVQEYME-TDLANVLEQG-----PLLEEHARLFMYQLLRGLKYIHSA---NVLHRDLKPANLFINTEDLVL 160 (320)
T ss_dssp -CCSCSEEEEEEECCS-EEHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHT---TCBCCCCSGGGEEEETTTTEE
T ss_pred cccccCceeEEeeccC-CCHHHHhhcC-----CccHHHHHHHHHHHHHHHHHHHhC---CEecCCCCHHHEEEcCCCCeE
Confidence 3467899999998 6999998642 388999999999999999999999 999999999999997 56799
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
||+||-
T Consensus 161 kl~Dfg 166 (320)
T 2i6l_A 161 KIGDFG 166 (320)
T ss_dssp EECCCT
T ss_pred EEccCc
Confidence 999995
No 222
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=99.89 E-value=2e-23 Score=201.34 Aligned_cols=146 Identities=29% Similarity=0.490 Sum_probs=123.0
Q ss_pred HhcCCCCCCccccCCCceEEEEEe--CCCcEEEEEEcccccccc-cHHHHHHHHHHHhcC---CCCCccceeeEEe----
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL--ADGKLVAVKRLKEERTSG-GELQFQTEVKIISMA---VHRNLLRLYGFCT---- 362 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~--~~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l---~H~niv~l~~~~~---- 362 (447)
..++|++.+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.+++.+ +||||+++++++.
T Consensus 9 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~ 88 (326)
T 1blx_A 9 ADQQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRT 88 (326)
T ss_dssp GGGTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEEC
T ss_pred chhceeeeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeeccc
Confidence 346788899999999999999997 358899999986543221 223567788777666 8999999999987
Q ss_pred -cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeec
Q 013258 363 -TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 363 -~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~ 441 (447)
.....++||||+. |+|.+++..... ..+++..+..++.|++.||+|||+. +|+||||||+||+++.++.+||+
T Consensus 89 ~~~~~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---gi~H~dlkp~Nili~~~~~~kl~ 162 (326)
T 1blx_A 89 DRETKLTLVFEHVD-QDLTTYLDKVPE--PGVPTETIKDMMFQLLRGLDFLHSH---RVVHRDLKPQNILVTSSGQIKLA 162 (326)
T ss_dssp SSEEEEEEEEECCS-CBHHHHHHHSCT--TCSCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECTTCCEEEC
T ss_pred CCCceEEEEEecCC-CCHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHC---CceeccCCHHHeEEcCCCCEEEe
Confidence 4567899999998 699999987532 2488999999999999999999999 99999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 163 Dfg 165 (326)
T 1blx_A 163 DFG 165 (326)
T ss_dssp SCC
T ss_pred cCc
Confidence 995
No 223
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=99.89 E-value=2.3e-23 Score=204.96 Aligned_cols=140 Identities=21% Similarity=0.354 Sum_probs=122.1
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCce-----
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEK----- 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~----- 367 (447)
++|...+.||+|+||.||+|+.. +|+.||||+++...... ....+.+|+.+++.++||||+++++++...+..
T Consensus 42 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 121 (371)
T 4exu_A 42 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 121 (371)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCC
T ss_pred ccEEEEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCccccee
Confidence 56778899999999999999864 68999999996543222 234688999999999999999999999876654
Q ss_pred -EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 368 -LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 368 -~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
++||||+. ++|.+.+.. .+++..+..++.|++.||+|||+. +|+||||||+|||++.++.+||+||-
T Consensus 122 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dikp~NIll~~~~~~kL~Dfg 189 (371)
T 4exu_A 122 FYLVMPFMQ-TDLQKIMGM------EFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 189 (371)
T ss_dssp CEEEEECCC-EEHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSCCCGGGEEECTTCCEEECSTT
T ss_pred EEEEEcccc-ccHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHC---CCcCCCcCHHHeEECCCCCEEEEecC
Confidence 99999997 688887743 288999999999999999999999 99999999999999999999999995
No 224
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=99.89 E-value=7.2e-24 Score=206.49 Aligned_cols=142 Identities=18% Similarity=0.184 Sum_probs=116.5
Q ss_pred cCCCCCCccccCCCceEEEEEeC----CCcEEEEEEccccccc----------ccHHHHHHHHHHHhcCCCCCccceeeE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA----DGKLVAVKRLKEERTS----------GGELQFQTEVKIISMAVHRNLLRLYGF 360 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~----------~~~~~~~~E~~~l~~l~H~niv~l~~~ 360 (447)
++|.+.+.||+|+||.||+|+.. ++..+|||.+...... .....+.+|+..+..++||||++++++
T Consensus 37 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~ 116 (345)
T 2v62_A 37 NQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGS 116 (345)
T ss_dssp CEEEEEEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEE
T ss_pred ceEEEEeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeecc
Confidence 46778899999999999999975 5778999998643211 012246788899999999999999999
Q ss_pred Eec----CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 361 CTT----VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 361 ~~~----~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
+.. ....++||||+ +++|.+++.... .+++..+..++.|++.||+|||+. +|+||||||+|||++.++
T Consensus 117 ~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~Dlkp~NIll~~~~ 188 (345)
T 2v62_A 117 GLTEFKGRSYRFMVMERL-GIDLQKISGQNG----TFKKSTVLQLGIRMLDVLEYIHEN---EYVHGDIKAANLLLGYKN 188 (345)
T ss_dssp EEEESSSCEEEEEEEECE-EEEHHHHCBGGG----BCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEESSS
T ss_pred cccccCCCcEEEEEEecc-CCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhC---CeeCCCcCHHHEEEccCC
Confidence 987 67889999999 999999997654 489999999999999999999999 999999999999999888
Q ss_pred --ceeecccc
Q 013258 437 --DQSSKTIL 444 (447)
Q Consensus 437 --~~~i~df~ 444 (447)
.+||+||-
T Consensus 189 ~~~~kL~Dfg 198 (345)
T 2v62_A 189 PDQVYLADYG 198 (345)
T ss_dssp TTSEEECCCT
T ss_pred CCcEEEEeCC
Confidence 99999995
No 225
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=99.89 E-value=3.3e-23 Score=202.74 Aligned_cols=151 Identities=21% Similarity=0.275 Sum_probs=113.5
Q ss_pred HHHHHHhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc
Q 013258 288 RELQVATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE 366 (447)
Q Consensus 288 ~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~ 366 (447)
.+.....++|++.+.||+|+||.||+|+.. +++.||||++.... .....+.+|++.+..++||||+++++++.....
T Consensus 16 ~~~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~ 93 (360)
T 3e3p_A 16 ERSRKEMDRFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDP--RFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE 93 (360)
T ss_dssp HHHHHHHTTEEEC----------CEEEEETTTCCEEEEEEEECCT--TCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS
T ss_pred hhchhhccceEEEEEEecCCCeEEEEEEECCCCCEEEEEEEecCc--cccHHHHHHHHHHHhcCCCCcccHHHhhhcccc
Confidence 344566789999999999999999999974 68999999885432 223357788888899999999999999865433
Q ss_pred -------eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh--cCCCCCeeecCCCCCceeeCC-CC
Q 013258 367 -------KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH--EHCDPKIIHRDVKAANILLDE-DA 436 (447)
Q Consensus 367 -------~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH--~~~~~~ivHrDlkp~NILl~~-~~ 436 (447)
.++||||+++ +|...+.........+++..+..++.|++.||.||| +. +|+||||||+|||++. ++
T Consensus 94 ~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~---~ivH~Dlkp~NIll~~~~~ 169 (360)
T 3e3p_A 94 RDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLPSV---NVCHRDIKPHNVLVNEADG 169 (360)
T ss_dssp SCTTCEEEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTSTTT---CCBCSCCCGGGEEEETTTT
T ss_pred ccccceeEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCCCC---CeecCcCCHHHEEEeCCCC
Confidence 7899999986 555555432223335888999999999999999999 77 9999999999999997 89
Q ss_pred ceeecccc
Q 013258 437 DQSSKTIL 444 (447)
Q Consensus 437 ~~~i~df~ 444 (447)
.+||+||-
T Consensus 170 ~~kl~Dfg 177 (360)
T 3e3p_A 170 TLKLCDFG 177 (360)
T ss_dssp EEEECCCT
T ss_pred cEEEeeCC
Confidence 99999995
No 226
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=99.89 E-value=1.2e-23 Score=202.27 Aligned_cols=144 Identities=24% Similarity=0.443 Sum_probs=124.0
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccc-cccHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEE
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERT-SGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv 370 (447)
...++|+..+.||+|+||.||+|+..+ .+|+|.++.... ......+.+|+.++..++||||+++++++...+..++|
T Consensus 30 i~~~~~~~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv 107 (319)
T 2y4i_B 30 IPFEQLEIGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAII 107 (319)
T ss_dssp SCCSCEECCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEE
T ss_pred CCHHHeEEeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEE
Confidence 345678889999999999999999753 499999865432 22234578899999999999999999999999999999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|||+++++|.+++.... ..+++..+..++.|+++||+|||++ +|+||||||+|||++ ++.+||+||-
T Consensus 108 ~e~~~~~~L~~~l~~~~---~~~~~~~~~~i~~qi~~al~~lH~~---~i~H~dlkp~NIl~~-~~~~~l~Dfg 174 (319)
T 2y4i_B 108 TSLCKGRTLYSVVRDAK---IVLDVNKTRQIAQEIVKGMGYLHAK---GILHKDLKSKNVFYD-NGKVVITDFG 174 (319)
T ss_dssp CBCCCSEEHHHHTTSSC---CCCCSHHHHHHHHHHHHHHHHHHHT---TCCCCCCCSTTEEEC---CCEECCCS
T ss_pred eecccCCcHHHHHHhcC---CCCCHHHHHHHHHHHHHHHHHHHhC---CccccCCChhhEEEe-CCCEEEeecC
Confidence 99999999999997643 2488999999999999999999999 999999999999998 6799999996
No 227
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=99.89 E-value=1.4e-23 Score=209.87 Aligned_cols=140 Identities=29% Similarity=0.427 Sum_probs=114.8
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecC----C--ceE
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTV----T--EKL 368 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~----~--~~~ 368 (447)
+|+..+.||+|+||.||+|+.. +++.||||++.... ..+.+|+++++.++|||||++++++... + ..+
T Consensus 55 ~y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~-----~~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~ 129 (420)
T 1j1b_A 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDK-----RFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLN 129 (420)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCT-----TSCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEE
T ss_pred eEEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccc-----hhHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEE
Confidence 4677789999999999999975 58999999985432 1234799999999999999999988542 2 367
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-Cceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-ADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-~~~~i~df~ 444 (447)
+||||+++ ++.+.+.........+++..+..++.|+++||+|||++ +|+||||||+|||++.+ +.+||+||-
T Consensus 130 lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~NILl~~~~~~~kl~DFG 202 (420)
T 1j1b_A 130 LVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFG 202 (420)
T ss_dssp EEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred eehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHC---CccccCCChhhEEEeCCCCeEEeccch
Confidence 99999985 67666654222223589999999999999999999999 99999999999999965 568999995
No 228
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=99.89 E-value=3e-23 Score=202.68 Aligned_cols=140 Identities=21% Similarity=0.349 Sum_probs=121.3
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccc-cHHHHHHHHHHHhcCCCCCccceeeEEecCCc------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSG-GELQFQTEVKIISMAVHRNLLRLYGFCTTVTE------ 366 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------ 366 (447)
++|...+.||+|+||.||+|+.. +|+.||||.+....... ....+.+|+.+++.++||||+++++++.....
T Consensus 24 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 103 (353)
T 3coi_A 24 KTYVSPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYD 103 (353)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCC
T ss_pred ceEEEeeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccccccccee
Confidence 46777899999999999999964 68999999986543222 23468899999999999999999999987654
Q ss_pred eEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 367 KLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 367 ~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.++||||+. |+|.+++.. .+++..+..++.|++.||+|||++ +|+||||||+|||+++++.+||+||-
T Consensus 104 ~~lv~e~~~-~~l~~~~~~------~~~~~~~~~i~~qi~~al~~LH~~---~ivH~dlkp~NIl~~~~~~~kl~Dfg 171 (353)
T 3coi_A 104 FYLVMPFMQ-TDLQKIMGL------KFSEEKIQYLVYQMLKGLKYIHSA---GVVHRDLKPGNLAVNEDCELKILDFG 171 (353)
T ss_dssp CEEEEECCS-EEGGGTTTS------CCCHHHHHHHHHHHHHHHHHHHHT---TCCCSSCCGGGEEECTTCCEEECSTT
T ss_pred EEEEecccc-CCHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEeECCCCcEEEeecc
Confidence 499999997 688877643 288999999999999999999999 99999999999999999999999995
No 229
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=99.89 E-value=1.2e-23 Score=207.01 Aligned_cols=141 Identities=11% Similarity=0.009 Sum_probs=105.1
Q ss_pred CCCCCCccccCCCceEEEEEeC-CCcEEEEEEccccccc--ccHHHHHHHHH---HHhcCCCCCcccee-------eEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTS--GGELQFQTEVK---IISMAVHRNLLRLY-------GFCT 362 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~~E~~---~l~~l~H~niv~l~-------~~~~ 362 (447)
+|...+.||+|+||.||+|+.. +++.||||+++..... .....+.+|+. .+.. +||||++++ +++.
T Consensus 63 ~y~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~-~hp~iv~~~~~~~~p~d~~~ 141 (371)
T 3q60_A 63 KLKLVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLG-ESPEEARDRRRLLLPSDAVA 141 (371)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC-----------CBCCCCEEEE
T ss_pred eeeeeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcc-cChhhhhhceeEEeeehhee
Confidence 4777899999999999999965 6899999999764321 22335777854 5555 799988754 4443
Q ss_pred cC-----------------CceEEEeecCCCCChhhHhhccCCCCCCCChHHH------HHHHHHHHHHHhhhhcCCCCC
Q 013258 363 TV-----------------TEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTR------KKIALGSARGLSYLHEHCDPK 419 (447)
Q Consensus 363 ~~-----------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~------~~i~~~ia~gL~yLH~~~~~~ 419 (447)
.. ...++||||++ |+|.+++..... .+.+..+ ..++.|+++||+|||++ +
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~---~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~---~ 214 (371)
T 3q60_A 142 VQSQPPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF---VYVFRGDEGILALHILTAQLIRLAANLQSK---G 214 (371)
T ss_dssp ETTSCSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH---SCCCCHHHHHHHHHHHHHHHHHHHHHHHHT---T
T ss_pred cCCCCCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc---ccchhhhhhhhhHHHHHHHHHHHHHHHHHC---C
Confidence 32 33799999999 899999987422 2455666 78889999999999999 9
Q ss_pred eeecCCCCCceeeCCCCceeecccc
Q 013258 420 IIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 420 ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
|+||||||+|||++.++.+||+||-
T Consensus 215 ivHrDikp~NIll~~~~~~kL~DFG 239 (371)
T 3q60_A 215 LVHGHFTPDNLFIMPDGRLMLGDVS 239 (371)
T ss_dssp EEETTCSGGGEEECTTSCEEECCGG
T ss_pred CccCcCCHHHEEECCCCCEEEEecc
Confidence 9999999999999999999999995
No 230
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=99.89 E-value=3.2e-23 Score=207.90 Aligned_cols=142 Identities=21% Similarity=0.298 Sum_probs=122.8
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcC------CCCCccceeeEEecCCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMA------VHRNLLRLYGFCTTVTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l------~H~niv~l~~~~~~~~~~ 367 (447)
.+|++.+.||+|+||+||+|+.. +++.||||+++... ....++.+|++++..+ +|+||+++++++...+..
T Consensus 97 ~ry~~~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~ 174 (429)
T 3kvw_A 97 YRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK--RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHI 174 (429)
T ss_dssp TTEEEEEEEEESSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEE
T ss_pred CcEEEEEEcccCccEEEEEEEECCCCcEEEEEEECCcc--chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeE
Confidence 46888899999999999999865 58999999996532 2234677888888766 577999999999999999
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc--eeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD--QSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~--~~i~df~ 444 (447)
++||||+. ++|.+++..... ..+++..+..++.|+++||+|||+. +|+||||||+|||++.++. +||+||-
T Consensus 175 ~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NILl~~~~~~~vkL~DFG 247 (429)
T 3kvw_A 175 CMTFELLS-MNLYELIKKNKF--QGFSLPLVRKFAHSILQCLDALHKN---RIIHCDLKPENILLKQQGRSGIKVIDFG 247 (429)
T ss_dssp EEEECCCC-CBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHH---TEECSCCSGGGEEESSTTSCCEEECCCT
T ss_pred EEEEeccC-CCHHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeEEccCCCcceEEeecc
Confidence 99999996 699999887543 2489999999999999999999999 9999999999999999987 9999995
No 231
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=99.89 E-value=7.6e-24 Score=203.14 Aligned_cols=147 Identities=23% Similarity=0.355 Sum_probs=118.8
Q ss_pred HHHhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-----cHHHHHHHHHHHhcC----CCCCccceeeE
Q 013258 291 QVATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMA----VHRNLLRLYGF 360 (447)
Q Consensus 291 ~~~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l----~H~niv~l~~~ 360 (447)
....++|++.+.||+|+||.||+|+. .+++.||||+++...... ....+.+|+.++.++ +||||++++++
T Consensus 27 ~~~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~ 106 (312)
T 2iwi_A 27 EAFEAEYRLGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDW 106 (312)
T ss_dssp ------CEEEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEE
T ss_pred hhhhhceEEeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEE
Confidence 34457799999999999999999986 468999999996543211 122466789988888 89999999999
Q ss_pred EecCCceEEEeec-CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-CCCce
Q 013258 361 CTTVTEKLLVYPY-MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQ 438 (447)
Q Consensus 361 ~~~~~~~~lv~e~-~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~ 438 (447)
+...+..++|+|| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+||+++ +++.+
T Consensus 107 ~~~~~~~~~v~e~~~~~~~L~~~l~~~~----~~~~~~~~~~~~qi~~~l~~lH~~---~i~H~dlkp~Nil~~~~~~~~ 179 (312)
T 2iwi_A 107 FETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAAIQHCHSR---GVVHRDIKDENILIDLRRGCA 179 (312)
T ss_dssp C-----CEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHH---TEECCCCSGGGEEEETTTTEE
T ss_pred EecCCeEEEEEEecCCCCCHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CeeecCCChhhEEEeCCCCeE
Confidence 9999999999999 78999999998754 389999999999999999999999 999999999999999 88999
Q ss_pred eecccc
Q 013258 439 SSKTIL 444 (447)
Q Consensus 439 ~i~df~ 444 (447)
||+||-
T Consensus 180 kl~dfg 185 (312)
T 2iwi_A 180 KLIDFG 185 (312)
T ss_dssp EECCCS
T ss_pred EEEEcc
Confidence 999995
No 232
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=99.89 E-value=2.2e-23 Score=201.76 Aligned_cols=145 Identities=26% Similarity=0.363 Sum_probs=122.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEe--------c
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCT--------T 363 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~--------~ 363 (447)
..+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++..+. ||||+++++++. .
T Consensus 27 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~ 105 (337)
T 3ll6_A 27 ELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNE-EEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTG 105 (337)
T ss_dssp TEEEEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESS-HHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTS
T ss_pred CceEEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCc-hHHHHHHHHHHHHHHHhccCCChhhccccccccccccccC
Confidence 346788899999999999999964 68999999985432 223446899999999996 999999999984 2
Q ss_pred CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCC--eeecCCCCCceeeCCCCceeec
Q 013258 364 VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPK--IIHRDVKAANILLDEDADQSSK 441 (447)
Q Consensus 364 ~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~--ivHrDlkp~NILl~~~~~~~i~ 441 (447)
....++||||+. |+|.+++..... ...+++..+..++.|++.||+|||+. + |+||||||+|||++.++.+||+
T Consensus 106 ~~~~~lv~e~~~-g~L~~~l~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~---~~~ivH~Dikp~NIl~~~~~~~kl~ 180 (337)
T 3ll6_A 106 QAEFLLLTELCK-GQLVEFLKKMES-RGPLSCDTVLKIFYQTCRAVQHMHRQ---KPPIIHRDLKVENLLLSNQGTIKLC 180 (337)
T ss_dssp SEEEEEEEECCS-EEHHHHHHHHHT-TCSCCHHHHHHHHHHHHHHHHHHHTS---SSCCBCCCCCGGGCEECTTSCEEBC
T ss_pred CceEEEEEEecC-CCHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhC---CCCEEEccCCcccEEECCCCCEEEe
Confidence 344789999996 799998875321 22489999999999999999999998 6 9999999999999999999999
Q ss_pred ccc
Q 013258 442 TIL 444 (447)
Q Consensus 442 df~ 444 (447)
||-
T Consensus 181 Dfg 183 (337)
T 3ll6_A 181 DFG 183 (337)
T ss_dssp CCT
T ss_pred cCc
Confidence 995
No 233
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=99.88 E-value=8.1e-24 Score=206.69 Aligned_cols=138 Identities=20% Similarity=0.232 Sum_probs=119.5
Q ss_pred cCCCCCCccccCCCceEEEEEeCC---------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccc---------
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLAD---------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLR--------- 356 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~--------- 356 (447)
++|.+.+.||+|+||.||+|+... ++.||||.++.. ..+.+|++++..++||||++
T Consensus 42 ~~y~~~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~------~~~~~E~~~l~~l~h~niv~~~~~~~~~~ 115 (352)
T 2jii_A 42 RQWKLKSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD------GRLFNEQNFFQRAAKPLQVNKWKKLYSTP 115 (352)
T ss_dssp CEEEEEEEEEEETTEEEEEEEECC-----------CEEEEEEETT------STHHHHHHHHHHHCCHHHHHHHHHHTTCT
T ss_pred CeEEEEEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc------chHHHHHHHHHHhcccchhhhhhhhccCC
Confidence 568888999999999999999653 789999998543 25889999999999999988
Q ss_pred ------eeeEEec-CCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 357 ------LYGFCTT-VTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 357 ------l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
+++++.. ....++||||+ +++|.+++.... ...+++..+..++.|++.||+|||++ +|+||||||+|
T Consensus 116 ~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dikp~N 189 (352)
T 2jii_A 116 LLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSP--KHVLSERSVLQVACRLLDALEFLHEN---EYVHGNVTAEN 189 (352)
T ss_dssp TCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSG--GGCCCHHHHHHHHHHHHHHHHHHHHT---TCBCSCCCGGG
T ss_pred ccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCC--cCCCCHHHHHHHHHHHHHHHHHHHhC---CccCCCCCHHH
Confidence 5677765 67889999999 999999998642 12489999999999999999999999 99999999999
Q ss_pred eeeCCCC--ceeecccc
Q 013258 430 ILLDEDA--DQSSKTIL 444 (447)
Q Consensus 430 ILl~~~~--~~~i~df~ 444 (447)
||++.++ .+||+||-
T Consensus 190 Il~~~~~~~~~kl~Dfg 206 (352)
T 2jii_A 190 IFVDPEDQSQVTLAGYG 206 (352)
T ss_dssp EEEETTEEEEEEECCGG
T ss_pred EEEcCCCCceEEEecCc
Confidence 9999998 89999995
No 234
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=99.88 E-value=2.4e-23 Score=206.49 Aligned_cols=141 Identities=25% Similarity=0.379 Sum_probs=115.1
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEecCCc------eE
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTTVTE------KL 368 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~------~~ 368 (447)
.+|...+.||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++..... .+
T Consensus 40 ~~Y~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~-----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~ 114 (394)
T 4e7w_A 40 IAYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR-----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLN 114 (394)
T ss_dssp EEEEEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT-----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEE
T ss_pred ceEEEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc-----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEE
Confidence 35777899999999999999987777799998854321 12479999999999999999999865432 78
Q ss_pred EEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-CCCceeecccc
Q 013258 369 LVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQSSKTIL 444 (447)
Q Consensus 369 lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~~i~df~ 444 (447)
+||||++++ +.+.+.........+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+||-
T Consensus 115 lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~---~ivHrDlkp~Nill~~~~~~~kL~DFG 187 (394)
T 4e7w_A 115 LVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFG 187 (394)
T ss_dssp EEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEEETTTTEEEECCCT
T ss_pred EEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHC---CccCCCCCHHHEEEcCCCCcEEEeeCC
Confidence 999999864 4444332211223488999999999999999999999 999999999999999 79999999995
No 235
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=99.88 E-value=2.2e-23 Score=200.95 Aligned_cols=145 Identities=22% Similarity=0.345 Sum_probs=125.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccc-----cHHHHHHHHHHHhcCC--CCCccceeeEEecC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSG-----GELQFQTEVKIISMAV--HRNLLRLYGFCTTV 364 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~-----~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~ 364 (447)
..++|++.+.||+|+||.||+|+. .+++.||||.++...... ....+.+|+.++..++ |+||+++++++...
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~ 120 (320)
T 3a99_A 41 LESQYQVGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERP 120 (320)
T ss_dssp CTTTEEEEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECS
T ss_pred ccCceEEEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecC
Confidence 446788889999999999999985 468999999996543221 1234778999999996 59999999999999
Q ss_pred CceEEEeecCCC-CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-CCCceeecc
Q 013258 365 TEKLLVYPYMTN-GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD-EDADQSSKT 442 (447)
Q Consensus 365 ~~~~lv~e~~~~-gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~-~~~~~~i~d 442 (447)
+..++|+||+.+ ++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||++ +++.+||+|
T Consensus 121 ~~~~lv~e~~~~~~~L~~~l~~~~----~l~~~~~~~i~~qi~~~L~~LH~~---~ivH~Dlkp~NIll~~~~~~~kL~D 193 (320)
T 3a99_A 121 DSFVLILERPEPVQDLFDFITERG----ALQEELARSFFWQVLEAVRHCHNC---GVLHRDIKDENILIDLNRGELKLID 193 (320)
T ss_dssp SEEEEEEECCSSEEEHHHHHHHHC----SCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEETTTTEEEECC
T ss_pred CcEEEEEEcCCCCccHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHC---CcEeCCCCHHHEEEeCCCCCEEEee
Confidence 999999999986 89999998753 388999999999999999999999 999999999999999 788999999
Q ss_pred cc
Q 013258 443 IL 444 (447)
Q Consensus 443 f~ 444 (447)
|-
T Consensus 194 fg 195 (320)
T 3a99_A 194 FG 195 (320)
T ss_dssp CT
T ss_pred Cc
Confidence 95
No 236
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=99.88 E-value=4.8e-23 Score=205.14 Aligned_cols=142 Identities=23% Similarity=0.332 Sum_probs=112.6
Q ss_pred CCCC-CCccccCCCceEEEEEeC---CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec--CCceEE
Q 013258 296 GFSN-KNILGRGGFGKVYKGRLA---DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT--VTEKLL 369 (447)
Q Consensus 296 ~~~~-~~~lg~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~--~~~~~l 369 (447)
.|.+ .++||+|+||+||+|+.. +++.||||+++... ....+.+|+.+++.++||||+++++++.. ....++
T Consensus 21 ~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~---~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~l 97 (405)
T 3rgf_A 21 LFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWL 97 (405)
T ss_dssp HEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSS---CCHHHHHHHHHHHHCCCTTBCCCCEEEEETTTTEEEE
T ss_pred hhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCC---CCHHHHHHHHHHHhcCCCCeeeEeeEEecCCCCeEEE
Confidence 3544 468999999999999965 47899999996432 23468899999999999999999999954 667899
Q ss_pred EeecCCCCChhhHhhccC-----CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee----CCCCceee
Q 013258 370 VYPYMTNGSVASRLRERQ-----SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL----DEDADQSS 440 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~-----~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl----~~~~~~~i 440 (447)
||||+. |+|.+++.... .....+++..+..++.|++.||+|||+. +|+||||||+|||+ ++++.+||
T Consensus 98 v~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~---~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 98 LFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHAN---WVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhC---CEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 999997 58888776421 1122488999999999999999999999 99999999999999 77889999
Q ss_pred cccc
Q 013258 441 KTIL 444 (447)
Q Consensus 441 ~df~ 444 (447)
+||-
T Consensus 174 ~Dfg 177 (405)
T 3rgf_A 174 ADMG 177 (405)
T ss_dssp CCTT
T ss_pred EECC
Confidence 9996
No 237
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.88 E-value=2.8e-23 Score=214.94 Aligned_cols=132 Identities=15% Similarity=0.133 Sum_probs=104.1
Q ss_pred cccCCCceEEEEE-eCCCcEEEEEEcccccc---------cccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEe
Q 013258 303 LGRGGFGKVYKGR-LADGKLVAVKRLKEERT---------SGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 303 lg~G~~g~Vy~~~-~~~~~~vavK~~~~~~~---------~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.+.|+.|.++.++ .-.|+.+|||++..... .....+|.+|+++|+++ .|+||+++++++.+....||||
T Consensus 242 ~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLVM 321 (569)
T 4azs_A 242 PYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVM 321 (569)
T ss_dssp -C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEEE
T ss_pred cccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEEE
Confidence 4556666655544 22488899999864321 11234699999999999 7999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||++||+|.+.|.... +++. ..|+.||+.||+|+|++ +||||||||+|||+++++.+||+||-
T Consensus 322 Eyv~G~~L~d~i~~~~----~l~~---~~I~~QIl~AL~ylH~~---GIIHRDIKPeNILL~~dg~vKL~DFG 384 (569)
T 4azs_A 322 EKLPGRLLSDMLAAGE----EIDR---EKILGSLLRSLAALEKQ---GFWHDDVRPWNVMVDARQHARLIDFG 384 (569)
T ss_dssp ECCCSEEHHHHHHTTC----CCCH---HHHHHHHHHHHHHHHHT---TCEESCCCGGGEEECTTSCEEECCCT
T ss_pred ecCCCCcHHHHHHhCC----CCCH---HHHHHHHHHHHHHHHHC---CceeccCchHhEEECCCCCEEEeecc
Confidence 9999999999998653 2543 35899999999999999 99999999999999999999999995
No 238
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=99.88 E-value=1.2e-22 Score=192.82 Aligned_cols=142 Identities=22% Similarity=0.269 Sum_probs=118.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEE-ecCCceEEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC-TTVTEKLLV 370 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv 370 (447)
..++|+..+.||+|+||.||+|+. .+++.||||++..... ..++.+|+.++..++|++++..++++ ...+..++|
T Consensus 7 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv 83 (296)
T 4hgt_A 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK---HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMV 83 (296)
T ss_dssp ----CEEEEEEEECSSSEEEEEEETTTTEEEEEEEEEC------CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEE
T ss_pred cCCceEEeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc---chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEE
Confidence 346799999999999999999996 5689999998754322 22578999999999998887777665 567778999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
|||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+||-
T Consensus 84 ~e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~---~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg 153 (296)
T 4hgt_A 84 MELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp EECC-CCBHHHHHHHTTS---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEECCGGGTTCEEECCCT
T ss_pred EEcc-CCCHHHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CeecCCCCHHHeeeeccCCCCeEEEecCc
Confidence 9999 9999999975432 389999999999999999999999 99999999999999 788999999995
No 239
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=99.88 E-value=3.1e-23 Score=215.74 Aligned_cols=147 Identities=25% Similarity=0.349 Sum_probs=125.6
Q ss_pred cCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec------CCce
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT------VTEK 367 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~------~~~~ 367 (447)
++|.+.+.||+|+||.||+|... +|+.||||+++..........+.+|++++..++||||+++++++.. .+..
T Consensus 14 grY~i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~ 93 (676)
T 3qa8_A 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLP 93 (676)
T ss_dssp ---CCCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSC
T ss_pred CCeEEEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeE
Confidence 67999999999999999999864 5899999998765444445579999999999999999999998765 6678
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCc---eeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDAD---QSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~---~~i~df~ 444 (447)
++||||+++|+|.+++..... ...+++..+..++.|++.||+|||+. +|+||||||+||+++.++. +||+||-
T Consensus 94 ~LVmEy~~ggsL~~~L~~~~~-~~~lse~~i~~I~~QLl~aL~yLHs~---gIVHrDLKP~NILl~~~g~~~~vKL~DFG 169 (676)
T 3qa8_A 94 LLAMEYCEGGDLRKYLNQFEN-CCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLG 169 (676)
T ss_dssp CCEEECCSSCBHHHHHHSSSC-TTCCCSSHHHHHHHHHHHHHHHHHHT---TBCCCCCCSTTEEEECCSSSCEEEECSCC
T ss_pred EEEEEeCCCCCHHHHHHhccc-CCCCCHHHHHHHHHHHHHHHHHHHHC---CCccCCCCHHHeEeecCCCceeEEEcccc
Confidence 999999999999999987532 23488999999999999999999999 9999999999999998775 8999995
Q ss_pred c
Q 013258 445 R 445 (447)
Q Consensus 445 ~ 445 (447)
-
T Consensus 170 ~ 170 (676)
T 3qa8_A 170 Y 170 (676)
T ss_dssp C
T ss_pred c
Confidence 3
No 240
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=99.88 E-value=8.4e-23 Score=197.23 Aligned_cols=148 Identities=23% Similarity=0.324 Sum_probs=122.0
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHH-HHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVK-IISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~-~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|...+.||+|+||.||+|... +++.||||+++.........++..|+. +++.++||||+++++++...+..++||
T Consensus 21 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~ 100 (327)
T 3aln_A 21 AEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICM 100 (327)
T ss_dssp SCSEEC-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEE
T ss_pred HHHhhehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEE
Confidence 357888899999999999999974 689999999975433333345666665 778889999999999999999999999
Q ss_pred ecCCCCChhhHhhccC-CCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQ-SSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~-~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++ +|.+++.... .....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+||.
T Consensus 101 e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~ivH~dlkp~NIll~~~~~~kl~Dfg 171 (327)
T 3aln_A 101 ELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKEN--LKIIHRDIKPSNILLDRSGNIKLCDFG 171 (327)
T ss_dssp CCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHH--HSCCCSCCCGGGEEEETTTEEEECCCS
T ss_pred eecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhcc--CCEeECCCCHHHEEEcCCCCEEEccCC
Confidence 99985 8877776311 1123488999999999999999999984 279999999999999999999999995
No 241
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=99.88 E-value=1.6e-22 Score=192.21 Aligned_cols=141 Identities=22% Similarity=0.268 Sum_probs=121.3
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEE-ecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFC-TTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~-~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||.||+|+. .+++.||||++.... ...++.+|+.++..++|++++..+.++ ...+..++||
T Consensus 8 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (296)
T 3uzp_A 8 GNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKT---KHPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVM 84 (296)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEESCS---SCCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEE
T ss_pred ccEEEEEEEEccCCCeEEEEEEEcCCCcEEEEEEecCCc---chhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEE
Confidence 35788889999999999999996 568999999985432 223689999999999998877766665 5567789999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
||+ +++|.+++..... .+++..+..++.|++.||+|||++ +|+||||||+|||+ ++++.+||+||-
T Consensus 85 e~~-~~~L~~~~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~---~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg 153 (296)
T 3uzp_A 85 ELL-GPSLEDLFNFCSR---KFSLKTVLLLADQMISRIEYIHSK---NFIHRDVKPDNFLMGLGKKGNLVYIIDFG 153 (296)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECSCCCGGGEEECCGGGTTCEEECCCT
T ss_pred Eec-CCCHHHHHHhhcc---CCCHHHHHHHHHHHHHHHHHHHhC---CeeeCCCCHHHeEEecCCCCCeEEEeeCC
Confidence 999 9999999975432 489999999999999999999999 99999999999999 488899999995
No 242
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=99.88 E-value=9.6e-23 Score=197.25 Aligned_cols=143 Identities=21% Similarity=0.313 Sum_probs=123.1
Q ss_pred hcCCCCCCccccCCCceEEEEEe-C-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC------ccceeeEEecCC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-A-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN------LLRLYGFCTTVT 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 365 (447)
.++|++.+.||+|+||.||+|.. . +++.||||+++... .....+.+|++++..++|++ ++++++++...+
T Consensus 13 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~ 90 (339)
T 1z57_A 13 SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD--RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHG 90 (339)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETT
T ss_pred cCceEEEEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC--chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCC
Confidence 35788889999999999999986 3 58899999986432 22346889999998887654 999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC-----------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE----------- 434 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~----------- 434 (447)
..++||||+ +++|.+++..... ..+++..+..++.|+++||+|||++ +|+||||||+|||++.
T Consensus 91 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~---~ivH~Dlkp~Nil~~~~~~~~~~~~~~ 164 (339)
T 1z57_A 91 HICIVFELL-GLSTYDFIKENGF--LPFRLDHIRKMAYQICKSVNFLHSN---KLTHTDLKPENILFVQSDYTEAYNPKI 164 (339)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEESCCCEEEEEC---
T ss_pred cEEEEEcCC-CCCHHHHHHhcCC--CCCcHHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeccccccccCCcc
Confidence 999999999 8999999987532 2478999999999999999999999 9999999999999998
Q ss_pred --------CCceeecccc
Q 013258 435 --------DADQSSKTIL 444 (447)
Q Consensus 435 --------~~~~~i~df~ 444 (447)
++.+||+||-
T Consensus 165 ~~~~~~~~~~~~kl~Dfg 182 (339)
T 1z57_A 165 KRDERTLINPDIKVVDFG 182 (339)
T ss_dssp -CEEEEESCCCEEECCCS
T ss_pred ccccccccCCCceEeeCc
Confidence 6679999995
No 243
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=99.88 E-value=7.8e-23 Score=196.25 Aligned_cols=143 Identities=21% Similarity=0.263 Sum_probs=124.9
Q ss_pred HhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-ccHHHHHHHHHHHhcCC--CCCccceeeEEecCCceEE
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-GGELQFQTEVKIISMAV--HRNLLRLYGFCTTVTEKLL 369 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~~~~~l 369 (447)
..++|++.+.||+|+||.||+++..+++.||||.+...... .....+.+|++++..++ ||||+++++++...+..++
T Consensus 26 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~l 105 (313)
T 3cek_A 26 KGRIYSILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYM 105 (313)
T ss_dssp TTEEEEEEEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEE
T ss_pred ccceEEEEEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEE
Confidence 34568888999999999999999888999999998654322 23346899999999997 5999999999999999999
Q ss_pred EeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 370 VYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 370 v~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||| +.+++|.+++.... .+++..+..++.|+++||+|||+. +|+||||||+|||+++ +.+||+||-
T Consensus 106 v~e-~~~~~L~~~l~~~~----~~~~~~~~~i~~qi~~aL~~LH~~---~ivH~dlkp~NIl~~~-~~~kL~Dfg 171 (313)
T 3cek_A 106 VME-CGNIDLNSWLKKKK----SIDPWERKSYWKNMLEAVHTIHQH---GIVHSDLKPANFLIVD-GMLKLIDFG 171 (313)
T ss_dssp EEC-CCSEEHHHHHHHCS----SCCHHHHHHHHHHHHHHHHHHHHT---TCCCCCCCGGGEEEET-TEEEECCCS
T ss_pred EEe-cCCCcHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHC---CceecCCCcccEEEEC-CeEEEeecc
Confidence 999 56889999998653 388999999999999999999999 9999999999999964 889999994
No 244
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=99.88 E-value=1.5e-22 Score=196.41 Aligned_cols=141 Identities=23% Similarity=0.281 Sum_probs=115.3
Q ss_pred hcCCCCC-CccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCccceeeEEec----CCce
Q 013258 294 TDGFSNK-NILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNLLRLYGFCTT----VTEK 367 (447)
Q Consensus 294 ~~~~~~~-~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~niv~l~~~~~~----~~~~ 367 (447)
.++|.+. ++||+|+||.||+|+.. +++.||||++... .....+....+..++||||+++++++.. ....
T Consensus 27 ~~~y~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~ 101 (336)
T 3fhr_A 27 TDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDS-----PKARQEVDHHWQASGGPHIVCILDVYENMHHGKRCL 101 (336)
T ss_dssp GGTEEEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEE
T ss_pred cceeEecceeeeeCCCeEEEEEEECCCCCEEEEEEecCc-----HHHHHHHHHHHHhcCCCChHHHHHHHhhccCCCceE
Confidence 4567774 46999999999999975 6899999998542 1122233334567799999999999876 4457
Q ss_pred EEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC---Cceeecccc
Q 013258 368 LLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED---ADQSSKTIL 444 (447)
Q Consensus 368 ~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~---~~~~i~df~ 444 (447)
++||||+++|+|.+++..... ..+++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+||+||-
T Consensus 102 ~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~ql~~~l~~LH~~---~ivH~dlkp~NIll~~~~~~~~~kl~Dfg 176 (336)
T 3fhr_A 102 LIIMECMEGGELFSRIQERGD--QAFTEREAAEIMRDIGTAIQFLHSH---NIAHRDVKPENLLYTSKEKDAVLKLTDFG 176 (336)
T ss_dssp EEEEECCTTEEHHHHHHTC-C--CCCBHHHHHHHHHHHHHHHHHHHHT---TEECSCCSGGGEEESCSSTTCCEEECCCT
T ss_pred EEEEeccCCCCHHHHHHhcCC--CCCCHHHHHHHHHHHHHHHHHHHhC---CeecCCCCHHHEEEEecCCCceEEEeccc
Confidence 999999999999999986532 3489999999999999999999999 99999999999999874 459999995
No 245
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=99.87 E-value=3.1e-22 Score=203.08 Aligned_cols=141 Identities=20% Similarity=0.239 Sum_probs=120.8
Q ss_pred hcCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC-CccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR-NLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~-niv~l~~~~~~~~~~~lv~ 371 (447)
.++|.+.+.||+|+||.||+|+. .+++.||||+++.... ..++.+|++++..++|+ ++..+..++...+..++||
T Consensus 6 ~~~y~i~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~---~~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvm 82 (483)
T 3sv0_A 6 GNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTK---HPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVM 82 (483)
T ss_dssp TTTEECCCCCEECSSCEEEEEEETTTCCEEEEEEEETTCS---SCCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEE
T ss_pred CCcEEEEEEEeeCCCEEEEEEEECCCCcEEEEEEeccccc---cHHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEE
Confidence 35788999999999999999996 4689999998754432 23588999999999874 5556666667788899999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee---CCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL---DEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl---~~~~~~~i~df~ 444 (447)
||+ +++|.+++..... .+++..+..|+.|++.||+|||++ +||||||||+|||+ ++++.+||+||-
T Consensus 83 e~~-g~sL~~ll~~~~~---~l~~~~~~~i~~qi~~aL~yLH~~---gIvHrDIKP~NILl~~~~~~~~vkL~DFG 151 (483)
T 3sv0_A 83 DLL-GPSLEDLFNFCSR---KLSLKTVLMLADQMINRVEFVHSK---SFLHRDIKPDNFLMGLGRRANQVYIIDFG 151 (483)
T ss_dssp ECC-CCBHHHHHHHTTT---CCCHHHHHHHHHHHHHHHHHHHHT---TEECCCCCGGGEEECCGGGTTCEEECCCT
T ss_pred ECC-CCCHHHHHHhhcC---CCCHHHHHHHHHHHHHHHHHHHHC---CEeecccCcceEEEecCCCCCeEEEEeCC
Confidence 999 9999999986432 389999999999999999999999 99999999999999 688999999995
No 246
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.87 E-value=9.9e-23 Score=219.35 Aligned_cols=171 Identities=21% Similarity=0.303 Sum_probs=145.9
Q ss_pred cCchHHHHHHHHHHHHCCCCCCCCCCCCCCC----CCC--Ccc------------ceeEeCCCCCEEEEEcCCCCccccc
Q 013258 22 ISANAEVDALYIFKSKLQDPNNSLQSWDNLP----GNL--CTW------------FHITCNPEGSVTRVDLGNAALSGEL 83 (447)
Q Consensus 22 ~~~~~~~~~l~~~~~~~~~~~~~l~~w~~~~----~~~--c~w------------~gv~c~~~~~v~~l~L~~~~l~g~~ 83 (447)
.....|+.||+.||.++.+| +|+... .+| |.| .||.|+..++|+.|+|+++++.|.+
T Consensus 265 ~~~~~d~~ALl~~k~~l~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~~~~V~~L~Ls~~~L~G~i 339 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEALDGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDNNGRVTGLSLAGFGAKGRV 339 (876)
T ss_dssp CHHHHHHHHHHHHHHHTTGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECTTSCEEEEECTTTCCEEEE
T ss_pred ccchHHHHHHHHHHHHcCCC-----CCCcCCCcccccCCccccccccccccccCcCceEecCCCCEEEEECccCCCCCcC
Confidence 34567999999999999887 787543 356 999 9999998899999999999999999
Q ss_pred cccccCCCCCCEEEC-CCCccCCC--------------------------------------------------------
Q 013258 84 APELGQLKNLELLEL-YGNNLSGH-------------------------------------------------------- 106 (447)
Q Consensus 84 ~~~l~~l~~L~~L~L-~~N~l~~~-------------------------------------------------------- 106 (447)
|++|++|++|++|+| ++|.++|.
T Consensus 340 p~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~~~~~i~~ 419 (876)
T 4ecn_A 340 PDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNPEMKPIKK 419 (876)
T ss_dssp CGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCTTSCCCCC
T ss_pred chHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCcccccccc
Confidence 999999999999999 77765444
Q ss_pred --------------------CChhhcCCCCCcEEEccCCcccc-----------------cCCcccc--CCCCCCeeeCc
Q 013258 107 --------------------IPSALGNLIKLKSLDLYSNLFNG-----------------TIPDTLA--NLKQLKYLRLN 147 (447)
Q Consensus 107 --------------------~p~~~~~l~~L~~L~ls~N~l~g-----------------~~p~~~~--~l~~L~~L~l~ 147 (447)
+|..|+++++|+.|+|++|+++| .+|+.++ ++++|++|+|+
T Consensus 420 ~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls 499 (876)
T 4ecn_A 420 DSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELY 499 (876)
T ss_dssp CCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEE
T ss_pred ccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECc
Confidence 88999999999999999999998 4999988 99999999999
Q ss_pred CccccccCchHHhhccccccccccccc-ccc-cCCCC--------CCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNR-LSG-PVPDN--------GSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~-l~g-~~p~~--------~~~~~~~~~~~~~n~ 197 (447)
+|++.+.+|..++++++|+.|++++|+ ++| .+|.. ..+..+..+.+.+|.
T Consensus 500 ~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~ 559 (876)
T 4ecn_A 500 NCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNN 559 (876)
T ss_dssp SCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSC
T ss_pred CCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCc
Confidence 999999999999999999999999998 888 66642 122355555555554
No 247
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=99.87 E-value=8.2e-23 Score=202.34 Aligned_cols=136 Identities=25% Similarity=0.357 Sum_probs=113.2
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC--------CCCccceeeEEe--
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV--------HRNLLRLYGFCT-- 362 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~--------H~niv~l~~~~~-- 362 (447)
.++|.+.+.||+|+||+||+|+.. +++.||||+++... .....+.+|++++..++ |+||+++++++.
T Consensus 36 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~ 113 (397)
T 1wak_A 36 NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE--HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKIS 113 (397)
T ss_dssp TTTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEE
T ss_pred CCeEEEEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC--cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeec
Confidence 367888999999999999999854 58899999996432 23446889999999885 788999999987
Q ss_pred --cCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCC
Q 013258 363 --TVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDA 436 (447)
Q Consensus 363 --~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~ 436 (447)
.....++||||+ ++++.+.+..... ..+++..+..++.|+++||+|||+++ +|+||||||+|||++.++
T Consensus 114 ~~~~~~~~lv~e~~-~~~l~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--givHrDikp~NIll~~~~ 184 (397)
T 1wak_A 114 GVNGTHICMVFEVL-GHHLLKWIIKSNY--QGLPLPCVKKIIQQVLQGLDYLHTKC--RIIHTDIKPENILLSVNE 184 (397)
T ss_dssp ETTEEEEEEEECCC-CCBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECCCCSGGGEEECCCH
T ss_pred CCCCceEEEEEecc-CccHHHHHHhccc--CCCCHHHHHHHHHHHHHHHHHHHHhC--CEecCCCCHHHeeEeccc
Confidence 556789999999 6677777665422 24899999999999999999999853 799999999999999875
No 248
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=99.87 E-value=1.8e-22 Score=193.78 Aligned_cols=144 Identities=24% Similarity=0.368 Sum_probs=112.7
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHH-HHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQ-FQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~-~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
.++|+..+.||+|+||.||+|+.. +|+.||||.++.........+ +.++..++..++||||+++++++...+..++||
T Consensus 24 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~ 103 (318)
T 2dyl_A 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAM 103 (318)
T ss_dssp GGGEEEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEE
T ss_pred hccccccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEE
Confidence 356777899999999999999975 689999999965433222223 445556788889999999999999999999999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhc-CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+ ++.+..+..... ..+++..+..++.|+++||+|||+ . +|+||||||+||+++.++.+||+||-
T Consensus 104 e~~-~~~~~~l~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~---~i~H~dlkp~Nil~~~~~~~kl~dfg 170 (318)
T 2dyl_A 104 ELM-GTCAEKLKKRMQ---GPIPERILGKMTVAIVKALYYLKEKH---GVIHRDVKPSNILLDERGQIKLCDFG 170 (318)
T ss_dssp CCC-SEEHHHHHHHHT---SCCCHHHHHHHHHHHHHHHHHHHHHH---CCCCCCCCGGGEEECTTSCEEECCCT
T ss_pred ecc-CCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhhC---CEEeCCCCHHHEEECCCCCEEEEECC
Confidence 999 445555544322 238899999999999999999998 5 89999999999999999999999995
No 249
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=99.87 E-value=1.5e-22 Score=203.31 Aligned_cols=140 Identities=25% Similarity=0.220 Sum_probs=112.8
Q ss_pred CCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeecCC
Q 013258 297 FSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPYMT 375 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~~~ 375 (447)
|...+.||+|+||+||.+...+|+.||||++... ....+.+|++++..+ +||||+++++++.+.+..++||||+.
T Consensus 17 ~~~~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~----~~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~ 92 (434)
T 2rio_A 17 VVSEKILGYGSSGTVVFQGSFQGRPVAVKRMLID----FCDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN 92 (434)
T ss_dssp EEEEEEEEECSTTCEEEEEESSSSEEEEEEEEGG----GHHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS
T ss_pred eeccCeEeeCCCeEEEEEEEECCeEEEEEEEcHH----HHHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC
Confidence 3445789999999998766667999999998543 234578999999876 89999999999999999999999995
Q ss_pred CCChhhHhhccCCCCCC---CChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-------------Ccee
Q 013258 376 NGSVASRLRERQSSLPP---LDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-------------ADQS 439 (447)
Q Consensus 376 ~gsL~~~l~~~~~~~~~---l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-------------~~~~ 439 (447)
|+|.+++......... .++..+..++.|++.||+|||++ +|+||||||+|||++.+ +.+|
T Consensus 93 -gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~k 168 (434)
T 2rio_A 93 -LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSL---KIIHRDLKPQNILVSTSSRFTADQQTGAENLRIL 168 (434)
T ss_dssp -EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHT---TEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEE
T ss_pred -CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHC---CccccCCChHhEEEecCcccccccccCCCceEEE
Confidence 6999999865322111 13345678999999999999999 99999999999999754 4899
Q ss_pred ecccc
Q 013258 440 SKTIL 444 (447)
Q Consensus 440 i~df~ 444 (447)
|+||-
T Consensus 169 L~DFG 173 (434)
T 2rio_A 169 ISDFG 173 (434)
T ss_dssp ECCCT
T ss_pred Ecccc
Confidence 99995
No 250
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.86 E-value=4.5e-22 Score=188.06 Aligned_cols=140 Identities=13% Similarity=0.069 Sum_probs=111.2
Q ss_pred HHHHHHHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccc-----------------cHHHHHHHHHHHhcC
Q 013258 287 LRELQVATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-----------------GELQFQTEVKIISMA 349 (447)
Q Consensus 287 ~~~~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-----------------~~~~~~~E~~~l~~l 349 (447)
+..+......|...+.||+|+||.||+|+..+|+.||||.++...... ....+.+|+++++.+
T Consensus 82 l~~~~~~~~~~~~~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l 161 (282)
T 1zar_A 82 LHRLVRSGKVDAIGKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKL 161 (282)
T ss_dssp HHHHHHTTSCSEEEEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCeEEEecCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhc
Confidence 334444455677779999999999999999779999999996432111 234689999999999
Q ss_pred CCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCc
Q 013258 350 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAAN 429 (447)
Q Consensus 350 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~N 429 (447)
+ | +++.+++.. +..++||||+++|+|.+ +.. .....++.|+++||+|||+. +|+||||||+|
T Consensus 162 ~--~-~~v~~~~~~-~~~~lvmE~~~g~~L~~-l~~----------~~~~~i~~qi~~~l~~lH~~---giiHrDlkp~N 223 (282)
T 1zar_A 162 Q--G-LAVPKVYAW-EGNAVLMELIDAKELYR-VRV----------ENPDEVLDMILEEVAKFYHR---GIVHGDLSQYN 223 (282)
T ss_dssp T--T-SSSCCEEEE-ETTEEEEECCCCEEGGG-CCC----------SCHHHHHHHHHHHHHHHHHT---TEECSCCSTTS
T ss_pred c--C-CCcCeEEec-cceEEEEEecCCCcHHH-cch----------hhHHHHHHHHHHHHHHHHHC---CCEeCCCCHHH
Confidence 8 5 667775544 55699999999999988 421 12457999999999999999 99999999999
Q ss_pred eeeCCCCceeeccccc
Q 013258 430 ILLDEDADQSSKTILR 445 (447)
Q Consensus 430 ILl~~~~~~~i~df~~ 445 (447)
||++ ++.+||+||-.
T Consensus 224 ILl~-~~~vkl~DFG~ 238 (282)
T 1zar_A 224 VLVS-EEGIWIIDFPQ 238 (282)
T ss_dssp EEEE-TTEEEECCCTT
T ss_pred EEEE-CCcEEEEECCC
Confidence 9999 99999999963
No 251
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=99.86 E-value=3e-22 Score=200.82 Aligned_cols=139 Identities=22% Similarity=0.272 Sum_probs=115.2
Q ss_pred cCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcC-CCCCccceeeEEecCCceEEEeec
Q 013258 295 DGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMA-VHRNLLRLYGFCTTVTEKLLVYPY 373 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l-~H~niv~l~~~~~~~~~~~lv~e~ 373 (447)
.+|...++||+|+||+||.....+++.||||++..... ..+.+|++++..+ +|||||++++++.+....++||||
T Consensus 24 ~~y~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~----~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~ 99 (432)
T 3p23_A 24 ISFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF----SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIEL 99 (432)
T ss_dssp EEEEEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE----EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEEC
T ss_pred EEEecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH----HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEEC
Confidence 45777899999999996655555789999999864322 1356899999998 799999999999999999999999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCC-----Cceeecccc
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDED-----ADQSSKTIL 444 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~-----~~~~i~df~ 444 (447)
+. |+|.+++..... ...+..+..++.|+++||+|||+. +|+||||||+|||++.+ ..+||+||-
T Consensus 100 ~~-g~L~~~l~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~---~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG 168 (432)
T 3p23_A 100 CA-ATLQEYVEQKDF---AHLGLEPITLLQQTTSGLAHLHSL---NIVHRDLKPHNILISMPNAHGKIKAMISDFG 168 (432)
T ss_dssp CS-EEHHHHHHSSSC---CCCSSCHHHHHHHHHHHHHHHHHT---TCCCCCCSTTSEEECCCBTTTBCCEEECCTT
T ss_pred CC-CCHHHHHHhcCC---CccchhHHHHHHHHHHHHHHHHHC---cCEeCCCCHHHEEEecCCCCCceeEEEeccc
Confidence 96 699999986543 244556789999999999999999 99999999999999532 357799995
No 252
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=99.86 E-value=8.3e-22 Score=194.63 Aligned_cols=146 Identities=23% Similarity=0.298 Sum_probs=121.6
Q ss_pred HhcCCCCCCccccCCCceEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CC-----CccceeeEEecCC
Q 013258 293 ATDGFSNKNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HR-----NLLRLYGFCTTVT 365 (447)
Q Consensus 293 ~~~~~~~~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~-----niv~l~~~~~~~~ 365 (447)
..++|++.+.||+|+||+||+|+.. +++.||||+++... ....++.+|+.++..++ |+ +|+++++++...+
T Consensus 52 ~~~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~ 129 (382)
T 2vx3_A 52 WMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK--AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRN 129 (382)
T ss_dssp ETTTEEEEEEEEEETTEEEEEEEETTTTEEEEEEEECSSH--HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETT
T ss_pred eeeeEEEEEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH--HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCC
Confidence 3467888999999999999999965 58899999996432 22346778888888775 54 4999999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC--CCCceeeccc
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD--EDADQSSKTI 443 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~--~~~~~~i~df 443 (447)
..++||||+. |+|.+++..... ..+++..+..++.|++.||+|||++ ..+|+||||||+|||++ .++.+||+||
T Consensus 130 ~~~lv~e~~~-~~L~~~l~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~-~~~ivHrDlkp~NIll~~~~~~~~kL~DF 205 (382)
T 2vx3_A 130 HLCLVFEMLS-YNLYDLLRNTNF--RGVSLNLTRKFAQQMCTALLFLATP-ELSIIHCDLKPENILLCNPKRSAIKIVDF 205 (382)
T ss_dssp EEEEEEECCC-CBHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHTST-TTCEECCCCSGGGEEESSTTSCCEEECCC
T ss_pred ceEEEEecCC-CCHHHHHhhcCc--CCCCHHHHHHHHHHHHHHHHHhccC-CCCEEcCCCCcccEEEecCCCCcEEEEec
Confidence 9999999996 599999987532 2388999999999999999999953 23899999999999995 4778999999
Q ss_pred c
Q 013258 444 L 444 (447)
Q Consensus 444 ~ 444 (447)
-
T Consensus 206 G 206 (382)
T 2vx3_A 206 G 206 (382)
T ss_dssp T
T ss_pred c
Confidence 5
No 253
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=2.3e-22 Score=211.64 Aligned_cols=172 Identities=25% Similarity=0.345 Sum_probs=146.0
Q ss_pred chHHHHHHHHHHHHCCCCCCC--------CCCCCCCCCCCCcc---ceeEeCCCCCEEEEEcCCCCccccccccccCCCC
Q 013258 24 ANAEVDALYIFKSKLQDPNNS--------LQSWDNLPGNLCTW---FHITCNPEGSVTRVDLGNAALSGELAPELGQLKN 92 (447)
Q Consensus 24 ~~~~~~~l~~~~~~~~~~~~~--------l~~w~~~~~~~c~w---~gv~c~~~~~v~~l~L~~~~l~g~~~~~l~~l~~ 92 (447)
...|+.||..++.++.++.-. ..+|+. +.++|.| .||+|+..++|+.|+|+++++.|.+|+++++|++
T Consensus 28 ~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~~~~V~~L~L~~~~l~g~lp~~l~~L~~ 106 (636)
T 4eco_A 28 YIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNSNGRVTGLSLEGFGASGRVPDAIGQLTE 106 (636)
T ss_dssp HHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECTTCCEEEEECTTSCCEEEECGGGGGCTT
T ss_pred HHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcCCCCEEEEEecCcccCCcCChHHhcCcc
Confidence 346899999999998765322 337975 4789999 9999997799999999999999999999999999
Q ss_pred CCEEECCCCc----------------------------------------------------------------------
Q 013258 93 LELLELYGNN---------------------------------------------------------------------- 102 (447)
Q Consensus 93 L~~L~L~~N~---------------------------------------------------------------------- 102 (447)
|++|+|++|.
T Consensus 107 L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~l~~l 186 (636)
T 4eco_A 107 LEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSSRITLKDT 186 (636)
T ss_dssp CCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCCCCCCCTT
T ss_pred ceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCccccccccccccchhhh
Confidence 9999999984
Q ss_pred --------cCCCCChhhcCCCCCcEEEccCCccccc-----------------CCcccc--CCCCCCeeeCcCccccccC
Q 013258 103 --------LSGHIPSALGNLIKLKSLDLYSNLFNGT-----------------IPDTLA--NLKQLKYLRLNNNSLSGLI 155 (447)
Q Consensus 103 --------l~~~~p~~~~~l~~L~~L~ls~N~l~g~-----------------~p~~~~--~l~~L~~L~l~~N~l~~~~ 155 (447)
++| +|..++++++|++|+|++|+++|. +|+.++ ++++|++|+|++|++.|.+
T Consensus 187 ~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~ 265 (636)
T 4eco_A 187 QIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKL 265 (636)
T ss_dssp TTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSC
T ss_pred hhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccC
Confidence 345 899999999999999999999986 999999 9999999999999999999
Q ss_pred chHHhhccccccccccccc-ccc-cCCCC-CCC------Cccccccccccc
Q 013258 156 PTSLTTITSLNILDLSNNR-LSG-PVPDN-GSF------SQFTPISFENNL 197 (447)
Q Consensus 156 p~~~~~l~~L~~l~ls~N~-l~g-~~p~~-~~~------~~~~~~~~~~n~ 197 (447)
|..++++++|+.|++++|. ++| .+|.. +.+ ..++.+.+.+|.
T Consensus 266 p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~ 316 (636)
T 4eco_A 266 PTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNN 316 (636)
T ss_dssp CTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSC
T ss_pred hHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCc
Confidence 9999999999999999998 988 67643 112 455556665554
No 254
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=99.86 E-value=5.8e-22 Score=193.08 Aligned_cols=143 Identities=19% Similarity=0.299 Sum_probs=121.4
Q ss_pred hcCCCCCCccccCCCceEEEEEeC-CC-cEEEEEEcccccccccHHHHHHHHHHHhcCCCCC------ccceeeEEecCC
Q 013258 294 TDGFSNKNILGRGGFGKVYKGRLA-DG-KLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN------LLRLYGFCTTVT 365 (447)
Q Consensus 294 ~~~~~~~~~lg~G~~g~Vy~~~~~-~~-~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n------iv~l~~~~~~~~ 365 (447)
.++|++.+.||+|+||+||+|+.. ++ +.||||+++... .....+.+|+.++..++|++ ++.+.+++...+
T Consensus 18 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~--~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~ 95 (355)
T 2eu9_A 18 QERYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG--KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHG 95 (355)
T ss_dssp TTTEEEEEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETT
T ss_pred cccEEEEEEeeccCCeEEEEEEecCCCceEEEEEEEcccc--cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCC
Confidence 357888899999999999999864 34 789999996432 23446888999999887766 899999999999
Q ss_pred ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceee-------------
Q 013258 366 EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILL------------- 432 (447)
Q Consensus 366 ~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl------------- 432 (447)
..++||||+ ++++.+.+..... ..+++..+..++.|++.||+|||++ +|+||||||+|||+
T Consensus 96 ~~~lv~e~~-~~~l~~~l~~~~~--~~~~~~~~~~i~~qi~~~L~~lH~~---~ivH~Dlkp~NIll~~~~~~~~~~~~~ 169 (355)
T 2eu9_A 96 HMCIAFELL-GKNTFEFLKENNF--QPYPLPHVRHMAYQLCHALRFLHEN---QLTHTDLKPENILFVNSEFETLYNEHK 169 (355)
T ss_dssp EEEEEEECC-CCBHHHHHHHTTT--CCCCHHHHHHHHHHHHHHHHHHHTT---TEECCCCCGGGEEESCCCEEEEECCC-
T ss_pred eEEEEEecc-CCChHHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHC---CcccCCCCHHHEEEecccccccccccc
Confidence 999999999 6778777766432 2488999999999999999999999 99999999999999
Q ss_pred ------CCCCceeecccc
Q 013258 433 ------DEDADQSSKTIL 444 (447)
Q Consensus 433 ------~~~~~~~i~df~ 444 (447)
+.++.+||+||-
T Consensus 170 ~~~~~~~~~~~~kl~Dfg 187 (355)
T 2eu9_A 170 SCEEKSVKNTSIRVADFG 187 (355)
T ss_dssp CCCEEEESCCCEEECCCT
T ss_pred cccccccCCCcEEEeecC
Confidence 567899999995
No 255
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.85 E-value=2.1e-21 Score=199.77 Aligned_cols=128 Identities=15% Similarity=0.239 Sum_probs=102.3
Q ss_pred CCCccccCCCceEEEEEeCCCcEEEEEEcccccccc-------cHHHHHHHHHHHhcCCCCCccceeeEEecCCceEEEe
Q 013258 299 NKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSG-------GELQFQTEVKIISMAVHRNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 299 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~-------~~~~~~~E~~~l~~l~H~niv~l~~~~~~~~~~~lv~ 371 (447)
..+.||+|+||+||+|.. .++.+++|......... ...++.+|++++++++||||+++..++...+..++||
T Consensus 340 ~~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVm 418 (540)
T 3en9_A 340 PEHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMM 418 (540)
T ss_dssp --------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEE
T ss_pred CCCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEE
Confidence 357899999999999965 47888999864322111 1234899999999999999997777777788889999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
||+++|+|.+++.. +..++.|+++||+|||++ +|+||||||+|||+++ .+||+||-
T Consensus 419 E~~~ggsL~~~l~~------------~~~i~~qi~~aL~~LH~~---gIiHrDiKp~NILl~~--~~kL~DFG 474 (540)
T 3en9_A 419 SYINGKLAKDVIED------------NLDIAYKIGEIVGKLHKN---DVIHNDLTTSNFIFDK--DLYIIDFG 474 (540)
T ss_dssp ECCCSEEHHHHSTT------------CTHHHHHHHHHHHHHHHT---TEECTTCCTTSEEESS--SEEECCCT
T ss_pred ECCCCCCHHHHHHH------------HHHHHHHHHHHHHHHHHC---cCccCCCCHHHEEECC--eEEEEECc
Confidence 99999999999865 357999999999999999 9999999999999999 99999995
No 256
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=99.85 E-value=8.7e-22 Score=193.45 Aligned_cols=143 Identities=19% Similarity=0.320 Sum_probs=120.2
Q ss_pred cCCCCCCccccCCCceEEEEEe-CCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-----------CCCccceeeEEe
Q 013258 295 DGFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----------HRNLLRLYGFCT 362 (447)
Q Consensus 295 ~~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----------H~niv~l~~~~~ 362 (447)
++|.+.+.||+|+||+||+|+. .+++.||||+++... .....+.+|+.++.+++ ||||+++++++.
T Consensus 19 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~--~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~ 96 (373)
T 1q8y_A 19 ARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK--VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFN 96 (373)
T ss_dssp TTEEEEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH--HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEE
T ss_pred CeEEEEEeeeecCCeEEEEEEecCCCcEEEEEEecCCc--cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhh
Confidence 5688889999999999999996 468999999986432 22346888999998876 899999999987
Q ss_pred cCC----ceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeC-----
Q 013258 363 TVT----EKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLD----- 433 (447)
Q Consensus 363 ~~~----~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~----- 433 (447)
..+ ..++||||+ +++|.+++..... ..+++..+..++.|++.||+|||+++ +|+||||||+|||++
T Consensus 97 ~~~~~~~~~~lv~e~~-~~~L~~~~~~~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~--~ivH~Dikp~NIll~~~~~~ 171 (373)
T 1q8y_A 97 HKGPNGVHVVMVFEVL-GENLLALIKKYEH--RGIPLIYVKQISKQLLLGLDYMHRRC--GIIHTDIKPENVLMEIVDSP 171 (373)
T ss_dssp EEETTEEEEEEEECCC-CEEHHHHHHHTTT--SCCCHHHHHHHHHHHHHHHHHHHHTT--CEECSCCSGGGEEEEEEETT
T ss_pred ccCCCCceEEEEEecC-CCCHHHHHHHhhc--cCCcHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChHHeEEeccCCC
Confidence 644 689999999 8999999987432 23889999999999999999999853 799999999999994
Q ss_pred -CCCceeecccc
Q 013258 434 -EDADQSSKTIL 444 (447)
Q Consensus 434 -~~~~~~i~df~ 444 (447)
.++.+||+||-
T Consensus 172 ~~~~~~kl~Dfg 183 (373)
T 1q8y_A 172 ENLIQIKIADLG 183 (373)
T ss_dssp TTEEEEEECCCT
T ss_pred cCcceEEEcccc
Confidence 44589999995
No 257
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.83 E-value=5.3e-21 Score=205.62 Aligned_cols=139 Identities=37% Similarity=0.641 Sum_probs=132.1
Q ss_pred EEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccc
Q 013258 72 VDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSL 151 (447)
Q Consensus 72 l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l 151 (447)
+++..+.+.|.+|+.+..+++|+.|+|++|+++|.+|..++++++|+.|+|++|+++|.+|+.++++++|+.|||++|++
T Consensus 613 ~~l~~~~~~g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l 692 (768)
T 3rgz_A 613 CNITSRVYGGHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKL 692 (768)
T ss_dssp SCTTSCEEEEECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCC
T ss_pred cccccceecccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcc
Confidence 45667889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccCCCCCCCCCCC
Q 013258 152 SGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPNTKKPCSGS 211 (447)
Q Consensus 152 ~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~C~~~ 211 (447)
+|.+|..+..+++|+.||+|+|+++|.+|..+.+..+...+|.||+++||.+.. +|...
T Consensus 693 ~g~ip~~l~~l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~~ 751 (768)
T 3rgz_A 693 DGRIPQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDPS 751 (768)
T ss_dssp EECCCGGGGGCCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCSC
T ss_pred cCcCChHHhCCCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCCC
Confidence 999999999999999999999999999999999999999999999999998765 78543
No 258
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=99.82 E-value=5e-21 Score=191.00 Aligned_cols=146 Identities=16% Similarity=0.172 Sum_probs=108.2
Q ss_pred CCCCCCccccCCCceEEEEEe-CCCcEEEEEEccccccc--ccHHHHHHHHHHHhcCCC-CCcccee---------eE--
Q 013258 296 GFSNKNILGRGGFGKVYKGRL-ADGKLVAVKRLKEERTS--GGELQFQTEVKIISMAVH-RNLLRLY---------GF-- 360 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~--~~~~~~~~E~~~l~~l~H-~niv~l~---------~~-- 360 (447)
.|...+.||+|+||+||+|+. .+|+.||||+++..... .....+.+|+.++..++| +|..... ..
T Consensus 79 ~~~~~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 158 (413)
T 3dzo_A 79 TLVRGTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVK 158 (413)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEE
T ss_pred eEEEecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcc
Confidence 355568899999999999995 46999999998733222 224579999999999987 3221111 11
Q ss_pred ----------Eec-----CCceEEEeecCCCCChhhHhhcc---CCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeee
Q 013258 361 ----------CTT-----VTEKLLVYPYMTNGSVASRLRER---QSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIH 422 (447)
Q Consensus 361 ----------~~~-----~~~~~lv~e~~~~gsL~~~l~~~---~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivH 422 (447)
+.. ....+++|+++ +++|.+++... ......++|..+..++.|+++||+|||++ +|+|
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~---~iiH 234 (413)
T 3dzo_A 159 DPQKKKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHY---GLVH 234 (413)
T ss_dssp CCC---------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHT---TEEC
T ss_pred cCCCCccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhC---Cccc
Confidence 111 22356677755 68999888521 11223478889999999999999999999 9999
Q ss_pred cCCCCCceeeCCCCceeeccccc
Q 013258 423 RDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 423 rDlkp~NILl~~~~~~~i~df~~ 445 (447)
|||||+|||++.++.+||+||--
T Consensus 235 rDiKp~NILl~~~~~~kL~DFG~ 257 (413)
T 3dzo_A 235 TYLRPVDIVLDQRGGVFLTGFEH 257 (413)
T ss_dssp SCCCGGGEEECTTCCEEECCGGG
T ss_pred CCcccceEEEecCCeEEEEeccc
Confidence 99999999999999999999953
No 259
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.80 E-value=4.5e-21 Score=185.39 Aligned_cols=172 Identities=16% Similarity=0.285 Sum_probs=144.7
Q ss_pred cCchHHHHHHHHHHHHC-CCCCCCCCCCC---CCCCCCCccceeEeC---------CCCCEEEEEcCCCCcccccccccc
Q 013258 22 ISANAEVDALYIFKSKL-QDPNNSLQSWD---NLPGNLCTWFHITCN---------PEGSVTRVDLGNAALSGELAPELG 88 (447)
Q Consensus 22 ~~~~~~~~~l~~~~~~~-~~~~~~l~~w~---~~~~~~c~w~gv~c~---------~~~~v~~l~L~~~~l~g~~~~~l~ 88 (447)
.+..++..||+.||..+ .++.+.+.+|. ....++|.|.|+.|. ...+|+.|+|++|.+. .+|+.++
T Consensus 23 ~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~l~ 101 (328)
T 4fcg_A 23 TALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQAF 101 (328)
T ss_dssp CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSCGG
T ss_pred ccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChhhh
Confidence 35567899999999988 57877888994 345789999999995 2368999999999998 7898999
Q ss_pred CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhh-------
Q 013258 89 QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTT------- 161 (447)
Q Consensus 89 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~------- 161 (447)
++++|++|+|++|.++ .+|..++++++|++|+|++|+++ .+|..++++++|++|+|++|++.+.+|..+..
T Consensus 102 ~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~ 179 (328)
T 4fcg_A 102 RLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASGEH 179 (328)
T ss_dssp GGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CCCE
T ss_pred hCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchhhh
Confidence 9999999999999999 89999999999999999999998 78999999999999999999888888887765
Q ss_pred --cccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 162 --ITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 162 --l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
+++|+.|++++|.++ .+|. .+.+..+..+.+.+|.
T Consensus 180 ~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~ 217 (328)
T 4fcg_A 180 QGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSP 217 (328)
T ss_dssp EESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSC
T ss_pred ccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCC
Confidence 888999999999988 5554 3345566666666664
No 260
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.79 E-value=1.3e-19 Score=168.98 Aligned_cols=133 Identities=17% Similarity=0.182 Sum_probs=102.0
Q ss_pred CCCCCccccCCCceEEEEEe-CCCcE--EEEEEcccccccc-----------------------cHHHHHHHHHHHhcCC
Q 013258 297 FSNKNILGRGGFGKVYKGRL-ADGKL--VAVKRLKEERTSG-----------------------GELQFQTEVKIISMAV 350 (447)
Q Consensus 297 ~~~~~~lg~G~~g~Vy~~~~-~~~~~--vavK~~~~~~~~~-----------------------~~~~~~~E~~~l~~l~ 350 (447)
|++.+.||+|+||.||+|.. .+|+. ||||+++...... ....+.+|+..+..++
T Consensus 49 ~~i~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~ 128 (258)
T 1zth_A 49 TAMGGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAK 128 (258)
T ss_dssp EEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHH
T ss_pred hhhCCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHH
Confidence 55678999999999999997 67888 9999875431110 0125789999999999
Q ss_pred CCCc--cceeeEEecCCceEEEeecCCC-C----ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhh-cCCCCCeee
Q 013258 351 HRNL--LRLYGFCTTVTEKLLVYPYMTN-G----SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLH-EHCDPKIIH 422 (447)
Q Consensus 351 H~ni--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH-~~~~~~ivH 422 (447)
|+++ ..++++ +..++||||+.+ | +|.+.... .++..+..++.|++.||.||| +. +|+|
T Consensus 129 ~~~i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~-------~~~~~~~~i~~qi~~~l~~lH~~~---givH 194 (258)
T 1zth_A 129 EAGVSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE-------LKELDVEGIFNDVVENVKRLYQEA---ELVH 194 (258)
T ss_dssp HTTCCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG-------GGGSCHHHHHHHHHHHHHHHHHTS---CEEC
T ss_pred hCCCCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc-------cChHHHHHHHHHHHHHHHHHHHHC---CEEe
Confidence 8865 333332 357899999942 4 55555432 234567889999999999999 88 9999
Q ss_pred cCCCCCceeeCCCCceeeccccc
Q 013258 423 RDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 423 rDlkp~NILl~~~~~~~i~df~~ 445 (447)
|||||+|||+++ .++|+||-.
T Consensus 195 rDlkp~NILl~~--~~~liDFG~ 215 (258)
T 1zth_A 195 ADLSEYNIMYID--KVYFIDMGQ 215 (258)
T ss_dssp SSCSTTSEEESS--SEEECCCTT
T ss_pred CCCCHHHEEEcC--cEEEEECcc
Confidence 999999999998 999999963
No 261
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.77 E-value=1.4e-18 Score=159.12 Aligned_cols=149 Identities=22% Similarity=0.234 Sum_probs=129.8
Q ss_pred CCCCCccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEE
Q 013258 52 PGNLCTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLD 121 (447)
Q Consensus 52 ~~~~c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 121 (447)
....|+|.+|.|... .+++.|+|++|.+++..|..+..+++|+.|+|++|.+++..+..|..+++|+.|+
T Consensus 15 ~~~~Cs~~~v~c~~~~l~~ip~~~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~ 94 (229)
T 3e6j_A 15 SQCSCSGTTVDCRSKRHASVPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLD 94 (229)
T ss_dssp TTCEEETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred CCCEEeCCEeEccCCCcCccCCCCCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEE
Confidence 368899999999732 3689999999999998899999999999999999999876667789999999999
Q ss_pred ccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCcccccccccccccc
Q 013258 122 LYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLC 200 (447)
Q Consensus 122 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~lc 200 (447)
|++|++++..+..+..+++|++|+|++|+++ .+|..+..+++|+.|++++|++++..+. ...+..+..+.+.+|+..|
T Consensus 95 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c 173 (229)
T 3e6j_A 95 LGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPWDC 173 (229)
T ss_dssp CCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCBCT
T ss_pred CCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCccC
Confidence 9999999776677899999999999999998 6889999999999999999999976654 2346677778888887665
Q ss_pred C
Q 013258 201 G 201 (447)
Q Consensus 201 ~ 201 (447)
.
T Consensus 174 ~ 174 (229)
T 3e6j_A 174 E 174 (229)
T ss_dssp T
T ss_pred C
Confidence 4
No 262
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.76 E-value=2.2e-18 Score=156.69 Aligned_cols=146 Identities=23% Similarity=0.351 Sum_probs=128.8
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN 125 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 125 (447)
|.|..|.|... ..++.|+|++|.+.+..+..+..+++|+.|+|++|.+++..|..|.++++|++|+|++|
T Consensus 11 C~~~~v~c~~~~l~~iP~~l~~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 11 CSNNIVDCRGKGLTEIPTNLPETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp EETTEEECTTSCCSSCCSSCCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred ECCCEEEcCCCCcCcCCCccCcCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 57899999632 36899999999999887778999999999999999999988999999999999999999
Q ss_pred cccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccccccC
Q 013258 126 LFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 126 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~lc~ 201 (447)
+++...+..|..+++|++|+|++|++++..|..|..+++|+.|++++|++++..+. ...+..+..+.+.+|+..|.
T Consensus 91 ~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 91 KITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSLYDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred cCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEECCCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99965555678999999999999999999999999999999999999999987765 34466777888889987763
No 263
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.75 E-value=6.8e-19 Score=156.57 Aligned_cols=148 Identities=25% Similarity=0.319 Sum_probs=121.3
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccc-cccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAP-ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
|.|..+.|... ..++.|+|++|.+++..+. .+..+++|++|+|++|.+++..|..|.++++|+.|+|++
T Consensus 8 C~~~~l~~s~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 8 CEGTTVDCTGRGLKEIPRDIPLHTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEcCCCCcCcCccCCCCCCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57888888632 2689999999999877665 489999999999999999998899999999999999999
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccCCC
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPN 203 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~ 203 (447)
|++++..|..+.++++|++|+|++|++++.+|..+..+++|+.|++++|.+++..+.......+....+.++...|+.|
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~~~~~l~~~~~~~~~~~C~~P 166 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAWFAEWLRKKSLNGGAARCGAP 166 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHHHHHHHHHHCCSGGGCBBCSS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchHHHHHHHHcCCCCCCCCCCCC
Confidence 9999888888999999999999999999999999999999999999999999876532111112222344455556543
No 264
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.75 E-value=1.8e-18 Score=165.94 Aligned_cols=138 Identities=28% Similarity=0.487 Sum_probs=108.7
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.|+|++|.++|.+|..+..+. |+.|+|++|.+++.+|..+..+++|+.|+|++|.+++.+|. +..+++|++|+|+
T Consensus 175 ~L~~L~L~~N~l~~~~~~~~~~l~-L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~-~~~l~~L~~L~Ls 252 (313)
T 1ogq_A 175 LFTSMTISRNRLTGKIPPTFANLN-LAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGK-VGLSKNLNGLDLR 252 (313)
T ss_dssp TCCEEECCSSEEEEECCGGGGGCC-CSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGG-CCCCTTCCEEECC
T ss_pred cCcEEECcCCeeeccCChHHhCCc-ccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCc-ccccCCCCEEECc
Confidence 455566666666666666565555 66666666666666666677777777777777777765554 7778899999999
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccCCCCCCCC
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCGPNTKKPC 208 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~C 208 (447)
+|++++.+|..+..+++|+.|++++|+++|.+|..+.+..+..+.+.+|+.+||.+.. .|
T Consensus 253 ~N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 253 NNRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp SSCCEECCCGGGGGCTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred CCcccCcCChHHhcCcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 9999999999999999999999999999999999888899999999999999997543 45
No 265
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.75 E-value=6e-18 Score=152.26 Aligned_cols=147 Identities=25% Similarity=0.304 Sum_probs=126.6
Q ss_pred CCccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 55 LCTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 55 ~c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
.|.|.+|.|... .+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|.++++|++|++++
T Consensus 6 ~C~~~~v~c~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~ 85 (208)
T 2o6s_A 6 SCSGTTVECYSQGRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLST 85 (208)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred EECCCEEEecCCCccCCCCCCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCC
Confidence 468999999742 2589999999999977667789999999999999999977677789999999999999
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccccccC
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~ 201 (447)
|++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|.+++..+.. ..+..+..+.+.+|+..|.
T Consensus 86 n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 163 (208)
T 2o6s_A 86 NQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 163 (208)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCC
T ss_pred CcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecC
Confidence 9999766667899999999999999999888878899999999999999999766643 4567788888888876554
No 266
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.74 E-value=6.1e-18 Score=153.75 Aligned_cols=146 Identities=18% Similarity=0.285 Sum_probs=127.5
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccc-cccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAP-ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~-~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
|.|..+.|... ..++.|+|++|.+++..+. .+..+++|++|+|++|.+++..|..|.++++|+.|+|++
T Consensus 11 C~~~~l~~s~n~l~~iP~~~~~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 90 (220)
T 2v70_A 11 CEGTTVDCSNQKLNKIPEHIPQYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTS 90 (220)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEeEeCCCCcccCccCCCCCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCC
Confidence 57888888632 2578999999999988664 478999999999999999988888999999999999999
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccccccC
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~ 201 (447)
|++++..|..|.++++|++|+|++|++++..|..+..+++|+.|++++|++++..|.. ..+..+..+.+.+|+..|.
T Consensus 91 N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 168 (220)
T 2v70_A 91 NRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFNCN 168 (220)
T ss_dssp SCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEECS
T ss_pred CccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCcCC
Confidence 9999887888999999999999999999999999999999999999999999987754 3466777788888877663
No 267
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.73 E-value=6.1e-19 Score=171.52 Aligned_cols=136 Identities=15% Similarity=0.111 Sum_probs=96.0
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEccccccc-------------ccHHHH--------HHHHHHHhcCCCCCc
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTS-------------GGELQF--------QTEVKIISMAVHRNL 354 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-------------~~~~~~--------~~E~~~l~~l~H~ni 354 (447)
-|++.+.||+|+||.||+|...+|+.||||+++..... ...... .+|...|.++.+.++
T Consensus 96 iY~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv 175 (397)
T 4gyi_A 96 VYSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGF 175 (397)
T ss_dssp CSEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 37888999999999999999888999999987643211 011122 234555555544333
Q ss_pred cceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCCceeeCC
Q 013258 355 LRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAANILLDE 434 (447)
Q Consensus 355 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~NILl~~ 434 (447)
....-+.. ...++||||++++.|.++.. ......++.|++.+|.|||.. +||||||||.|||+++
T Consensus 176 ~vp~p~~~--~~~~LVME~i~G~~L~~l~~----------~~~~~~l~~qll~~l~~lH~~---gIVHrDLKp~NILl~~ 240 (397)
T 4gyi_A 176 PVPEPIAQ--SRHTIVMSLVDALPMRQVSS----------VPDPASLYADLIALILRLAKH---GLIHGDFNEFNILIRE 240 (397)
T ss_dssp SCCCEEEE--ETTEEEEECCSCEEGGGCCC----------CSCHHHHHHHHHHHHHHHHHT---TEECSCCSTTSEEEEE
T ss_pred CCCeeeec--cCceEEEEecCCccHhhhcc----------cHHHHHHHHHHHHHHHHHHHC---CCcCCCCCHHHEEEeC
Confidence 21111111 22479999999888765432 123456889999999999998 9999999999999998
Q ss_pred CCc----------eeecccccc
Q 013258 435 DAD----------QSSKTILRR 446 (447)
Q Consensus 435 ~~~----------~~i~df~~~ 446 (447)
+++ +.|.||=+.
T Consensus 241 dgd~~d~~~~~~~~~iID~~Q~ 262 (397)
T 4gyi_A 241 EKDAEDPSSITLTPIIIXFPQM 262 (397)
T ss_dssp EECSSCTTSEEEEEEECCCTTC
T ss_pred CCCcccccccccceEEEEeCCc
Confidence 874 789998653
No 268
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.72 E-value=2.8e-18 Score=174.60 Aligned_cols=143 Identities=18% Similarity=0.194 Sum_probs=100.0
Q ss_pred CccceeEeCCCCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhc-CCCCCcEEEccCCcccccCCcc
Q 013258 56 CTWFHITCNPEGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIPDT 134 (447)
Q Consensus 56 c~w~gv~c~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~ 134 (447)
|.+.++.|....+++.|+|++|.+++..|..++.+++|+.|+|++|.+++.+|..+. .+++|+.|+|++|.+++. |.
T Consensus 109 N~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~- 186 (487)
T 3oja_A 109 NNISRVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG- 186 (487)
T ss_dssp SCCCCEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-
T ss_pred CcCCCCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cc-
Confidence 445555665445677777888877777777777778888888888888777777765 677888888888887754 32
Q ss_pred ccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccC
Q 013258 135 LANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 135 ~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~ 201 (447)
+..+++|+.|+|++|.+++.+| .+..+++|+.|++++|.+++.++....+..+..+++.+|+..|+
T Consensus 187 ~~~l~~L~~L~Ls~N~l~~~~~-~~~~l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 187 QVVFAKLKTLDLSSNKLAFMGP-EFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp CCCCTTCCEEECCSSCCCEECG-GGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred cccCCCCCEEECCCCCCCCCCH-hHcCCCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 3357778888888888876444 47777778888888888876444444556666667777765553
No 269
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.69 E-value=5.1e-17 Score=150.69 Aligned_cols=130 Identities=23% Similarity=0.288 Sum_probs=109.0
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..+..+++|++|+|+
T Consensus 36 ~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 115 (251)
T 3m19_A 36 DTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLG 115 (251)
T ss_dssp TCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcC
Confidence 57889999999988888888899999999999999998888888899999999999999987666778889999999999
Q ss_pred CccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
+|++++..+..+..+++|+.|++++|.+++..+. ...+..+..+++.+|.
T Consensus 116 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~ 166 (251)
T 3m19_A 116 GNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQ 166 (251)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCc
Confidence 9999877777788888999999999999876663 3455667777777764
No 270
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.69 E-value=4.1e-17 Score=142.92 Aligned_cols=126 Identities=27% Similarity=0.332 Sum_probs=109.1
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN 125 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 125 (447)
|+|.++.|... ..++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+..+++|+.|++++|
T Consensus 7 C~~~~l~~~~~~l~~~p~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N 86 (177)
T 2o6r_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHEN 86 (177)
T ss_dssp EETTEEECCSSCCSSCCTTCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEecCCCCccCCCCCCCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCCC
Confidence 67999999632 36899999999999766667889999999999999999776777899999999999999
Q ss_pred cccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC
Q 013258 126 LFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 126 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++++..+..+..+++|++|++++|++++..+..+..+++|+.|++++|++++..|.
T Consensus 87 ~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 142 (177)
T 2o6r_A 87 KLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 142 (177)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHHH
T ss_pred CccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCcc
Confidence 99977667788999999999999999977776778899999999999999987664
No 271
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.66 E-value=2.8e-16 Score=145.65 Aligned_cols=135 Identities=25% Similarity=0.301 Sum_probs=120.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|..+++|+.|+|++|++++..+..+..+++|++|+|
T Consensus 59 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 138 (251)
T 3m19_A 59 TKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRL 138 (251)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEEC
Confidence 57999999999999988888999999999999999999887888999999999999999999766667899999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccccccC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~~lc~ 201 (447)
++|++++..|..+..+++|+.|++++|++++..|. ...+..+..+.+.+|+..|.
T Consensus 139 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 139 NTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCTT
T ss_pred cCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCceeCC
Confidence 99999988777899999999999999999987764 34567778888888877664
No 272
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.65 E-value=3.2e-16 Score=146.88 Aligned_cols=144 Identities=24% Similarity=0.309 Sum_probs=75.3
Q ss_pred CCCCccceeEeCCCCC---------------------EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhh
Q 013258 53 GNLCTWFHITCNPEGS---------------------VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSAL 111 (447)
Q Consensus 53 ~~~c~w~gv~c~~~~~---------------------v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~ 111 (447)
.+.|.|.|+.|..... ++.|+|++|.+.+..+..+..+++|++|+|++|.++...+..|
T Consensus 2 ~~~C~~~~~~C~c~~~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~ 81 (270)
T 2o6q_A 2 EALCKKDGGVCSCNNNKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIF 81 (270)
T ss_dssp CCCBGGGTCSBEEETTTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTT
T ss_pred CccCCCCCCCCEeCCCCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhh
Confidence 4678888877753333 4455555555554444445555555555555555554333334
Q ss_pred cCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCcccc
Q 013258 112 GNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTP 190 (447)
Q Consensus 112 ~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~ 190 (447)
.++++|++|++++|++++..+..+.++++|++|++++|++++..|..+..+++|+.|++++|.+++..+.. ..+..+..
T Consensus 82 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~ 161 (270)
T 2o6q_A 82 KELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKE 161 (270)
T ss_dssp SSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCE
T ss_pred cCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccce
Confidence 55555555555555555433344455555555555555555555555555555555555555555433321 22334444
Q ss_pred cccccc
Q 013258 191 ISFENN 196 (447)
Q Consensus 191 ~~~~~n 196 (447)
+.+.+|
T Consensus 162 L~L~~n 167 (270)
T 2o6q_A 162 LRLYNN 167 (270)
T ss_dssp EECCSS
T ss_pred eEecCC
Confidence 444443
No 273
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.64 E-value=7.5e-16 Score=144.54 Aligned_cols=127 Identities=29% Similarity=0.375 Sum_probs=64.9
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..|..+.++++|++|++++|++++..|..++.+++|++|+++
T Consensus 64 ~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 141 (272)
T 3rfs_A 64 NVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLA 141 (272)
T ss_dssp TCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECC
Confidence 455555555555541 245555555555555555554444445555555555555555554444445555555555555
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 196 (447)
+|++++..|..+..+++|+.|++++|++++..|.. ..+..+..+.+.+|
T Consensus 142 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N 191 (272)
T 3rfs_A 142 HNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQN 191 (272)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCC
Confidence 55555444444455555555555555555444332 23344444444444
No 274
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=5.6e-16 Score=137.74 Aligned_cols=108 Identities=26% Similarity=0.372 Sum_probs=51.5
Q ss_pred CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccc
Q 013258 92 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 171 (447)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls 171 (447)
+|+.|+|++|.++ .+|..|.++++|+.|+|++|++++..|..|.++++|++|+|++|++++..|..|..+++|+.|+++
T Consensus 32 ~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~l~~i~~~~f~~l~~L~~L~L~ 110 (193)
T 2wfh_A 32 DVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNRLRCIPPRTFDGLKSLRLLSLH 110 (193)
T ss_dssp TCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECC
T ss_pred CCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCccCEeCHHHhCCCCCCCEEECC
Confidence 4555555555554 344445555555555555555554444445555555555555555554444445555555555555
Q ss_pred cccccccCCC-CCCCCcccccccccccccc
Q 013258 172 NNRLSGPVPD-NGSFSQFTPISFENNLNLC 200 (447)
Q Consensus 172 ~N~l~g~~p~-~~~~~~~~~~~~~~n~~lc 200 (447)
+|.+++..+. ...+..+..+.+.+|+..|
T Consensus 111 ~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 111 GNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 5555443332 1223344444444444443
No 275
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.63 E-value=7.4e-16 Score=136.85 Aligned_cols=129 Identities=22% Similarity=0.362 Sum_probs=113.3
Q ss_pred EEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCCh-hhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 70 TRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPS-ALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 70 ~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
+.|++++++++ .+|..+.. +|+.|+|++|.+++..+. .+.++++|+.|+|++|++++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 57999999994 68877655 999999999999976664 489999999999999999998899999999999999999
Q ss_pred ccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccccccC
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~ 201 (447)
|++++..|..+..+++|+.|++++|++++.+|.. ..+..+..+.+.+|+..|.
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~ 141 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCN 141 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCS
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCc
Confidence 9999999988999999999999999999988764 3466777788888876553
No 276
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.62 E-value=7e-16 Score=140.08 Aligned_cols=114 Identities=20% Similarity=0.267 Sum_probs=107.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..+..+++|++|+|
T Consensus 57 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 136 (220)
T 2v70_A 57 PQLRKINFSNNKITDIEEGAFEGASGVNEILLTSNRLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSL 136 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEEC
T ss_pred CCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCCccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEEC
Confidence 47999999999999888889999999999999999999888888999999999999999999888999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 180 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 180 (447)
++|++++..|..+..+++|+.|++++|.+++..+
T Consensus 137 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 137 YDNQITTVAPGAFDTLHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp TTSCCCCBCTTTTTTCTTCCEEECCSCCEECSGG
T ss_pred CCCcCCEECHHHhcCCCCCCEEEecCcCCcCCCc
Confidence 9999999989999999999999999999997654
No 277
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.61 E-value=1e-15 Score=160.35 Aligned_cols=131 Identities=18% Similarity=0.213 Sum_probs=113.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|||++|.+++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|++++..|..|.++++|++|+|
T Consensus 52 ~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~L 131 (635)
T 4g8a_A 52 FSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVA 131 (635)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEEC
T ss_pred cCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEEC
Confidence 36899999999999877888999999999999999999877888999999999999999999766678999999999999
Q ss_pred cCccccccCchHHhhccccccccccccccccc-CCCC-CCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGP-VPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~-~p~~-~~~~~~~~~~~~~n~ 197 (447)
++|++++..+..|+++++|+.|++++|.+++. +|.. +.+..++.+.+.+|.
T Consensus 132 s~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 132 VETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp TTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred CCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 99999988777899999999999999999763 4443 334556666666653
No 278
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.60 E-value=2.8e-15 Score=142.07 Aligned_cols=128 Identities=27% Similarity=0.323 Sum_probs=77.2
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+ . ..+++|++|+|++|.++ .+|..+..+++|+.|++++|++++..|..|.++++|++|+|
T Consensus 55 ~~L~~L~L~~n~l~~~~~-~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L 131 (290)
T 1p9a_G 55 TRLTQLNLDRAELTKLQV-D-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYL 131 (290)
T ss_dssp TTCCEEECTTSCCCEEEC-C-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCcccC-C-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEEC
Confidence 456667777776665322 2 56666666666666666 45666666666666666666666554555666666666666
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
++|++++..+..+..+++|+.|++++|++++..+.. ..+..+..+.+.+|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~ 183 (290)
T 1p9a_G 132 KGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENS 183 (290)
T ss_dssp TTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCc
Confidence 666666655555666666666666666666443332 224455555555553
No 279
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.60 E-value=4.2e-15 Score=132.05 Aligned_cols=123 Identities=25% Similarity=0.362 Sum_probs=110.4
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN 125 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 125 (447)
|.|..+.|... ..++.|+|++|.++ .+|..+..+++|+.|+|++|.+++..|..|.++++|+.|+|++|
T Consensus 10 C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N 88 (193)
T 2wfh_A 10 CLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYN 88 (193)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred eCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCC
Confidence 45777777531 36899999999998 78889999999999999999999888889999999999999999
Q ss_pred cccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccC
Q 013258 126 LFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPV 179 (447)
Q Consensus 126 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~ 179 (447)
++++..|..|..+++|++|+|++|++++..+..+..+++|+.|++++|.+....
T Consensus 89 ~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C~c 142 (193)
T 2wfh_A 89 RLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYCDC 142 (193)
T ss_dssp CCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEECSG
T ss_pred ccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeecCC
Confidence 999888888999999999999999999877778999999999999999998643
No 280
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.60 E-value=6.3e-16 Score=131.26 Aligned_cols=112 Identities=26% Similarity=0.321 Sum_probs=101.5
Q ss_pred CCEEEEEcCCCCcc-ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.++ +.+|..+..+++|+.|++++|.+++. ..++++++|++|++++|.+++.+|..+..+++|++|+
T Consensus 17 ~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ 94 (149)
T 2je0_A 17 SDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLN 94 (149)
T ss_dssp GGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEE
T ss_pred ccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEE
Confidence 46899999999998 88999899999999999999999975 7789999999999999999987898888899999999
Q ss_pred CcCcccccc-CchHHhhcccccccccccccccccCC
Q 013258 146 LNNNSLSGL-IPTSLTTITSLNILDLSNNRLSGPVP 180 (447)
Q Consensus 146 l~~N~l~~~-~p~~~~~l~~L~~l~ls~N~l~g~~p 180 (447)
+++|++++. .|..+..+++|+.|++++|.+++..+
T Consensus 95 ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 130 (149)
T 2je0_A 95 LSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLND 130 (149)
T ss_dssp CTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTT
T ss_pred CCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHH
Confidence 999999874 45789999999999999999997654
No 281
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.59 E-value=2.4e-15 Score=151.48 Aligned_cols=136 Identities=23% Similarity=0.278 Sum_probs=122.6
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.+.+.+|..+..+++|++|+|++|.+++..|..|.++++|+.|+|++|.+++..|..+.++++|++|+|
T Consensus 275 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L 354 (455)
T 3v47_A 275 SGVKTCDLSKSKIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDL 354 (455)
T ss_dssp SCCCEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEEC
T ss_pred cCceEEEecCccccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEEC
Confidence 46899999999999999999999999999999999999888989999999999999999999888899999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccccccCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCGP 202 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~~ 202 (447)
++|++++..|..+..+++|+.|++++|++++..+.. ..+..+..+.+.+|+..|..
T Consensus 355 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~ 411 (455)
T 3v47_A 355 SYNHIRALGDQSFLGLPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSC 411 (455)
T ss_dssp CSSCCCEECTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCT
T ss_pred CCCcccccChhhccccccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCC
Confidence 999999988999999999999999999999866544 45678888888899876653
No 282
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.59 E-value=2e-15 Score=147.66 Aligned_cols=141 Identities=24% Similarity=0.250 Sum_probs=111.0
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCcccccccccc-CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
|.|.-+.|... ..++.|+|++|.+++..+..+. .+++|+.|+|++|+|++..|..|.++++|+.|+|++
T Consensus 18 C~~~~l~c~~~~l~~iP~~~~~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 18 CASNILSCSKQQLPNVPQSLPSYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp EETTEEECCSSCCSSCCSSCCTTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred ECCCEEEeCCCCcCccCccCCCCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 56777777531 2478899999999887777776 899999999999999987777899999999999999
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC----CCCCcccccccccc
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN----GSFSQFTPISFENN 196 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~----~~~~~~~~~~~~~n 196 (447)
|++++..+..|.++++|++|+|++|++++..|..|..+++|+.|++++|.+++..+.. ..+..+..+++.+|
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N 173 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSN 173 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSS
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCC
Confidence 9998776777888999999999999998888888888999999999999988644332 22444444444444
No 283
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.59 E-value=9.5e-16 Score=132.91 Aligned_cols=129 Identities=26% Similarity=0.267 Sum_probs=108.6
Q ss_pred CCEEEEEcCCCCcc-ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
..++.|+|++|.++ +.+|..+..+++|+.|+|++|.+++. ..+..+++|++|++++|++++.+|..+..+++|++|+
T Consensus 24 ~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 101 (168)
T 2ell_A 24 AAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLN 101 (168)
T ss_dssp TSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEE
T ss_pred ccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEe
Confidence 46899999999998 78888889999999999999999865 7788999999999999999987888888899999999
Q ss_pred CcCccccccC-chHHhhcccccccccccccccccCC----CCCCCCccccccccccc
Q 013258 146 LNNNSLSGLI-PTSLTTITSLNILDLSNNRLSGPVP----DNGSFSQFTPISFENNL 197 (447)
Q Consensus 146 l~~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~g~~p----~~~~~~~~~~~~~~~n~ 197 (447)
|++|++++.. +..+..+++|+.|++++|.+++..+ ....+..+..+++.+|.
T Consensus 102 Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~ 158 (168)
T 2ell_A 102 LSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDRE 158 (168)
T ss_dssp CBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETT
T ss_pred ccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCC
Confidence 9999998743 2788889999999999999997665 33445666666666654
No 284
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.58 E-value=6.1e-15 Score=138.15 Aligned_cols=131 Identities=27% Similarity=0.333 Sum_probs=95.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+.++++|+.|++++|++++..|..+..+++|++|+|
T Consensus 61 ~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 140 (270)
T 2o6q_A 61 TKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSL 140 (270)
T ss_dssp TTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEEC
Confidence 46788888888887544444577888888888888888666666777888888888888887666666777888888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
++|.+++..+..+..+++|+.|++++|.+++..+.. ..+..+..+.+.+|.
T Consensus 141 s~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~ 192 (270)
T 2o6q_A 141 GYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQ 192 (270)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred CCCcCCccCHhHccCCcccceeEecCCcCcEeChhHhccCCCcCEEECCCCc
Confidence 888887766666777788888888888877655532 334556666666664
No 285
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.58 E-value=2.6e-15 Score=151.17 Aligned_cols=144 Identities=22% Similarity=0.299 Sum_probs=122.2
Q ss_pred CCCccce--eEeCCC---------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCC-ChhhcCCCCCcEEE
Q 013258 54 NLCTWFH--ITCNPE---------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHI-PSALGNLIKLKSLD 121 (447)
Q Consensus 54 ~~c~w~g--v~c~~~---------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ 121 (447)
..|.|.+ +.|... .+++.|+|++|.+.+..|..+.++++|++|+|++|.+.+.+ |..|.++++|++|+
T Consensus 6 ~~c~~~~~~~~c~~~~l~~lp~l~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~ 85 (455)
T 3v47_A 6 SECSVIGYNAICINRGLHQVPELPAHVNYVDLSLNSIAELNETSFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILK 85 (455)
T ss_dssp -CCEEETTEEECCSSCCSSCCCCCTTCCEEECCSSCCCEECTTTTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEE
T ss_pred ceeEEEccccCcCCCCcccCCCCCCccCEEEecCCccCcCChhHhccCccccEEECcCCcccceECcccccccccCCEEe
Confidence 4565555 677532 46899999999999988999999999999999999998666 56789999999999
Q ss_pred ccCCcccccCCccccCCCCCCeeeCcCccccccCchH--HhhcccccccccccccccccCCCC--CCCCccccccccccc
Q 013258 122 LYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTS--LTTITSLNILDLSNNRLSGPVPDN--GSFSQFTPISFENNL 197 (447)
Q Consensus 122 ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n~ 197 (447)
|++|++++..|..++++++|++|+|++|++++.+|.. +..+++|+.|++++|.+++..|.. ..+..+..+++.+|.
T Consensus 86 Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~ 165 (455)
T 3v47_A 86 LDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPLTSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNK 165 (455)
T ss_dssp CTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTCTTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCC
T ss_pred CCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCcccCCEEECCCCccCccCcccccCCCCcccEEeCCCCc
Confidence 9999999888999999999999999999999866665 889999999999999999887763 456677777777764
No 286
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.58 E-value=2.8e-15 Score=141.47 Aligned_cols=131 Identities=24% Similarity=0.268 Sum_probs=104.0
Q ss_pred CCEEEEEcCCCC-ccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAA-LSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~-l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|. +.+..|..+..+++|++|++++|.+++..|..+.++++|++|++++|++++..+..++.+++|++|+
T Consensus 80 ~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 159 (285)
T 1ozn_A 80 ALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLF 159 (285)
T ss_dssp TTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEE
Confidence 468888898887 6665577788888889999988888887788888888888888888888866666688888888888
Q ss_pred CcCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
|++|++++..+..+..+++|+.|++++|.+++..|.. ..+..+..+++.+|.
T Consensus 160 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 212 (285)
T 1ozn_A 160 LHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANN 212 (285)
T ss_dssp CCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSC
T ss_pred CCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeCCCCc
Confidence 8888888776667888888888888888888876643 335566666666664
No 287
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.57 E-value=1.8e-15 Score=156.20 Aligned_cols=142 Identities=19% Similarity=0.243 Sum_probs=114.7
Q ss_pred CCccceeEeCCC------------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEc
Q 013258 55 LCTWFHITCNPE------------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDL 122 (447)
Q Consensus 55 ~c~w~gv~c~~~------------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 122 (447)
.|.|.|+ |+.. .+++.|+|++|.+++..|..+.++++|++|+|++|++++..|..|+++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 4788887 7521 36899999999999888888999999999999999999888888999999999999
Q ss_pred cCCcccccCCccccCCCCCCeeeCcCccccc-cCchHHhhcccccccccccccccccCCC--CCCCCccccccccccc
Q 013258 123 YSNLFNGTIPDTLANLKQLKYLRLNNNSLSG-LIPTSLTTITSLNILDLSNNRLSGPVPD--NGSFSQFTPISFENNL 197 (447)
Q Consensus 123 s~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~ls~N~l~g~~p~--~~~~~~~~~~~~~~n~ 197 (447)
++|++++..|..++++++|++|++++|++++ .+|..++.+++|+.|++++|.+.+.+|. ...+..+..+.+.+|.
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~ 159 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALS 159 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCc
Confidence 9999997777779999999999999999986 3567788888899999999886555553 2345555555555553
No 288
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.57 E-value=4.8e-15 Score=134.53 Aligned_cols=112 Identities=25% Similarity=0.372 Sum_probs=104.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..|..+..+++|++|+|++|.++...+..|.++++|+.|+|++|++++..|..|..+++|++|+|
T Consensus 56 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L 135 (220)
T 2v9t_B 56 KKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELPKSLFEGLFSLQLLLLNANKINCLRVDAFQDLHNLNLLSL 135 (220)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccCHhHccCCCCCCEEECCCCCCCEeCHHHcCCCCCCCEEEC
Confidence 47999999999999998999999999999999999999766666899999999999999999888999999999999999
Q ss_pred cCccccccCchHHhhccccccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 178 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 178 (447)
++|++++..+..+..+++|+.|++++|.++..
T Consensus 136 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 136 YDNKLQTIAKGTFSPLRAIQTMHLAQNPFICD 167 (220)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSSCEECS
T ss_pred CCCcCCEECHHHHhCCCCCCEEEeCCCCcCCC
Confidence 99999998888899999999999999999863
No 289
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.57 E-value=3.2e-15 Score=144.17 Aligned_cols=130 Identities=20% Similarity=0.270 Sum_probs=102.0
Q ss_pred CCEEEEEcCCCCccccccccccC---------CCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQ---------LKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLAN 137 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~---------l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 137 (447)
.+++.|+|++|.+.+.+|..+.. +++|++|+|++|.++ .+|..++++++|+.|+|++|++++ +|+.++.
T Consensus 150 ~~L~~L~L~~n~~~~~~p~~~~~~~~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~ 227 (328)
T 4fcg_A 150 NRLRELSIRACPELTELPEPLASTDASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHH 227 (328)
T ss_dssp TTCCEEEEEEETTCCCCCSCSEEEC-CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGG
T ss_pred cCCCEEECCCCCCccccChhHhhccchhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-Cchhhcc
Confidence 46888888888888888877654 888888888888888 678888888888888888888874 6777888
Q ss_pred CCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccccc
Q 013258 138 LKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLN 198 (447)
Q Consensus 138 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~ 198 (447)
+++|++|+|++|++.+.+|..++.+++|+.|++++|++.+.+|.. ..+..+..+.+.+|..
T Consensus 228 l~~L~~L~Ls~n~~~~~~p~~~~~l~~L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~ 289 (328)
T 4fcg_A 228 LPKLEELDLRGCTALRNYPPIFGGRAPLKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVN 289 (328)
T ss_dssp CTTCCEEECTTCTTCCBCCCCTTCCCCCCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTT
T ss_pred CCCCCEEECcCCcchhhhHHHhcCCCCCCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCc
Confidence 888888888888888888888888888888888888888887754 3455566666666543
No 290
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.56 E-value=7.6e-15 Score=138.51 Aligned_cols=142 Identities=25% Similarity=0.300 Sum_probs=116.8
Q ss_pred CccceeEeCC---CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCc-ccccC
Q 013258 56 CTWFHITCNP---EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL-FNGTI 131 (447)
Q Consensus 56 c~w~gv~c~~---~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~ 131 (447)
|++.|++..+ ...++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|++++|. +....
T Consensus 18 c~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~ 97 (285)
T 1ozn_A 18 CPQQGLQAVPVGIPAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVD 97 (285)
T ss_dssp CCSSCCSSCCTTCCTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCC
T ss_pred cCcCCcccCCcCCCCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccC
Confidence 4444444332 2468999999999998777889999999999999999998888899999999999999997 77666
Q ss_pred CccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 132 PDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 132 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
|..+..+++|++|++++|.+++..|..+..+++|+.|++++|.+++..+. ...+..+..+.+.+|.
T Consensus 98 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 164 (285)
T 1ozn_A 98 PATFHGLGRLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNR 164 (285)
T ss_dssp TTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred HHHhcCCcCCCEEECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCc
Confidence 88899999999999999999988888899999999999999999876654 2346667777776663
No 291
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.56 E-value=7.7e-15 Score=127.59 Aligned_cols=109 Identities=27% Similarity=0.363 Sum_probs=96.7
Q ss_pred EEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCc
Q 013258 70 TRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 149 (447)
Q Consensus 70 ~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 149 (447)
+.|++++|.++. +|..+. ++|++|+|++|.+++..|..|.++++|+.|+|++|++++..|..|..+++|++|+|++|
T Consensus 12 ~~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 12 TTVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp TEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CEEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 467788888874 777664 89999999999999988999999999999999999999766667899999999999999
Q ss_pred cccccCchHHhhcccccccccccccccccCCC
Q 013258 150 SLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++++..|..+..+++|+.|++++|.++...++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~~ 120 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACSD 120 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBGG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCchh
Confidence 99988777899999999999999999977654
No 292
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.56 E-value=1.3e-14 Score=136.09 Aligned_cols=135 Identities=23% Similarity=0.232 Sum_probs=118.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+.++++|++|++++|++++..|..++.+++|+.|++
T Consensus 85 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l 164 (272)
T 3rfs_A 85 TNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDL 164 (272)
T ss_dssp TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEEC
Confidence 57999999999999877777899999999999999999877777899999999999999999777777899999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccccccC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc~ 201 (447)
++|++++..|..+..+++|+.|++++|++++.+|.. ..+..+..+.+.+|+..|.
T Consensus 165 ~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~ 220 (272)
T 3rfs_A 165 SYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCT 220 (272)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCC
T ss_pred CCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCCcccc
Confidence 999999888888899999999999999999877754 4577788888888876554
No 293
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.56 E-value=7.2e-15 Score=140.12 Aligned_cols=131 Identities=21% Similarity=0.341 Sum_probs=99.2
Q ss_pred CCEEEEEcCCCCcccccc-ccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccc-cCCccccCCCCCCee
Q 013258 67 GSVTRVDLGNAALSGELA-PELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNG-TIPDTLANLKQLKYL 144 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~-~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L 144 (447)
.+++.|+|++|.+.+..+ ..+..+++|++|++++|.+++..|..+.++++|+.|++++|.+++ .+|..+..+++|++|
T Consensus 101 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L 180 (306)
T 2z66_A 101 EQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFL 180 (306)
T ss_dssp TTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEE
T ss_pred CCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCccccccchhHHhhCcCCCEE
Confidence 467788888888876554 567788888888888888887777778888888888888888876 567778888888888
Q ss_pred eCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 145 RLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 145 ~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
++++|++++..|..+..+++|+.|++++|.+++..+. ...+..+..+++.+|.
T Consensus 181 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 234 (306)
T 2z66_A 181 DLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNH 234 (306)
T ss_dssp ECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSC
T ss_pred ECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCC
Confidence 8888888877777788888888888888888765542 2334566666666664
No 294
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.55 E-value=2.5e-14 Score=125.08 Aligned_cols=129 Identities=22% Similarity=0.264 Sum_probs=109.2
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
.+.++++++++.. +|..+ .++|+.|++++|.+++..+..+.++++|++|++++|++++..+..+.++++|++|++++
T Consensus 9 ~~~l~~~~~~l~~-~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLTS-VPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCSS-CCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCcc-CCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 3678999999874 55544 37999999999999987777789999999999999999976666789999999999999
Q ss_pred ccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccccccc
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLNLC 200 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~lc 200 (447)
|++++..+..+..+++|+.|++++|.+++..+.. ..+..+..+.+.+|+..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~ 138 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDC 138 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCC
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeec
Confidence 9999888888899999999999999999766654 346777778888887654
No 295
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.55 E-value=1.4e-14 Score=130.16 Aligned_cols=115 Identities=28% Similarity=0.334 Sum_probs=103.4
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..+.++++|++|++++|++++..+..+..+++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 131 (208)
T 2o6s_A 52 TSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRL 131 (208)
T ss_dssp TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred ccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEEC
Confidence 47999999999999766666789999999999999999777777899999999999999999776667899999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++|++++..+..+..+++|+.|++++|.+.+..|.
T Consensus 132 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 166 (208)
T 2o6s_A 132 YQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCPG 166 (208)
T ss_dssp CSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTTT
T ss_pred CCCccceeCHHHhccCCCccEEEecCCCeecCCCC
Confidence 99999987777789999999999999999987764
No 296
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.54 E-value=1.3e-14 Score=126.58 Aligned_cols=109 Identities=25% Similarity=0.316 Sum_probs=97.1
Q ss_pred EEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCc
Q 013258 70 TRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNN 149 (447)
Q Consensus 70 ~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N 149 (447)
+.+++++|+++ .+|..+. ++|+.|+|++|.+++..|..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 57899999995 6887775 89999999999999988999999999999999999999755556789999999999999
Q ss_pred cccccCchHHhhcccccccccccccccccCCC
Q 013258 150 SLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 150 ~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++++..+..+..+++|+.|++++|.++...++
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c~~~~ 123 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDCECRD 123 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCTTBGG
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccccccc
Confidence 99987777799999999999999999876543
No 297
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.54 E-value=5.7e-15 Score=143.84 Aligned_cols=144 Identities=21% Similarity=0.265 Sum_probs=116.5
Q ss_pred CCCCccceeEeCC------------CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEE
Q 013258 53 GNLCTWFHITCNP------------EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSL 120 (447)
Q Consensus 53 ~~~c~w~gv~c~~------------~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 120 (447)
...|.|.|+ |+. ..+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 467888887 541 1368999999999998777789999999999999999998888889999999999
Q ss_pred EccCCcccccCCccccCCCCCCeeeCcCccccccCc-hHHhhccccccccccccc-ccccCCC-CCCCCccccccccccc
Q 013258 121 DLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLSNNR-LSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 121 ~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~ls~N~-l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
++++|++++..+..++++++|++|++++|++++..+ ..+..+++|+.|++++|+ +++..|. ...+..+..+.+.+|.
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999996444458999999999999999986444 478889999999999995 6655443 3345667777777664
No 298
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.53 E-value=2.5e-15 Score=157.90 Aligned_cols=130 Identities=23% Similarity=0.411 Sum_probs=116.1
Q ss_pred CCEEEEEcCCCCcccc-----------------cccccc--CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCc-
Q 013258 67 GSVTRVDLGNAALSGE-----------------LAPELG--QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL- 126 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~-----------------~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~- 126 (447)
.+++.|+|++|.++|. +|+.++ ++++|++|+|++|.+.|.+|..++++++|+.|++++|+
T Consensus 206 ~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~~ 285 (636)
T 4eco_A 206 TKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLINVACNRG 285 (636)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEEECTTCTT
T ss_pred cCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEEECcCCCC
Confidence 5799999999999996 999999 99999999999999999999999999999999999998
Q ss_pred ccc-cCCccccCC------CCCCeeeCcCccccccCch--HHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 127 FNG-TIPDTLANL------KQLKYLRLNNNSLSGLIPT--SLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 127 l~g-~~p~~~~~l------~~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++| .+|..++++ ++|++|++++|+++ .+|. .++.+++|+.|++++|.++|.+|..+.+..+..+.+.+|.
T Consensus 286 l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip~~~~l~~L~~L~L~~N~ 364 (636)
T 4eco_A 286 ISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLPAFGSEIKLASLNLAYNQ 364 (636)
T ss_dssp SCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECCCCEEEEEESEEECCSSE
T ss_pred CccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchhhhCCCCCCCEEECCCCc
Confidence 998 899998887 99999999999999 7888 8999999999999999999999954445555666665553
No 299
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.53 E-value=1.9e-14 Score=131.37 Aligned_cols=114 Identities=23% Similarity=0.295 Sum_probs=103.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|+.|+|++|.+++..+..|..+++|+.|+|++|+++ .+|..+..+++|++|+|
T Consensus 64 ~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L 142 (229)
T 3e6j_A 64 INLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLAL 142 (229)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEEC
T ss_pred cCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEEC
Confidence 47999999999997655566799999999999999999877777899999999999999999 78999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++|++++..+..+..+++|+.|++++|.+++..++
T Consensus 143 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 177 (229)
T 3e6j_A 143 DQNQLKSIPHGAFDRLSSLTHAYLFGNPWDCECRD 177 (229)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECTTSCBCTTBGG
T ss_pred CCCcCCccCHHHHhCCCCCCEEEeeCCCccCCcch
Confidence 99999988778899999999999999999987653
No 300
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.53 E-value=1.2e-14 Score=151.73 Aligned_cols=130 Identities=18% Similarity=0.253 Sum_probs=99.0
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|++
T Consensus 32 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~L 111 (606)
T 3vq2_A 32 SSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLSNLILTGNPIQSFSPGSFSGLTSLENLVA 111 (606)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCCCCTTSSTTCTTCCEEEC
T ss_pred CCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcCEeECCCCcccccChhhcCCcccCCEEEc
Confidence 46788888888888777778888888888888888888777777888888888888888888777888888888888888
Q ss_pred cCccccccCchHHhhcccccccccccccccc-cCCC-CCCCCcccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSG-PVPD-NGSFSQFTPISFENN 196 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g-~~p~-~~~~~~~~~~~~~~n 196 (447)
++|.+++..|..++.+++|+.|++++|.+++ .+|. .+.+..++.+++.+|
T Consensus 112 ~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 112 VETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp TTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred cCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 8888877666777778888888888888775 4454 233455555555554
No 301
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.52 E-value=2e-14 Score=134.89 Aligned_cols=129 Identities=18% Similarity=0.243 Sum_probs=101.6
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.|+|++|.+++..+..+.++++|++|+|++|.+++..+..+.++++|++|++++|.+++..|..+.++++|++|+++
T Consensus 29 ~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~ 108 (276)
T 2z62_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (276)
T ss_dssp TCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred CccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECC
Confidence 58888998888887777788888889999998888887667788888888889998888887777788888888888888
Q ss_pred CccccccCchHHhhcccccccccccccccc-cCCCC-CCCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSG-PVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~-~~~~~~~~~~~~~n 196 (447)
+|++++..+..+..+++|+.|++++|.+++ .+|.. ..+..+..+.+.+|
T Consensus 109 ~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N 159 (276)
T 2z62_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (276)
T ss_dssp TSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSS
T ss_pred CCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCC
Confidence 888887766678888888888888888876 34532 23445555555554
No 302
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.52 E-value=2e-14 Score=148.60 Aligned_cols=110 Identities=30% Similarity=0.329 Sum_probs=102.8
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.|+|++|.+++ +|. ++.|++|+.|+|++|.|+ .+|..++++++|+.|+|++|++++ +| .++++++|+.|+|+
T Consensus 442 ~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls 516 (567)
T 1dce_A 442 DVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLC 516 (567)
T ss_dssp TCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECC
T ss_pred CceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECC
Confidence 47889999999997 665 999999999999999999 799999999999999999999996 77 89999999999999
Q ss_pred CccccccC-chHHhhcccccccccccccccccCCCC
Q 013258 148 NNSLSGLI-PTSLTTITSLNILDLSNNRLSGPVPDN 182 (447)
Q Consensus 148 ~N~l~~~~-p~~~~~l~~L~~l~ls~N~l~g~~p~~ 182 (447)
+|++++.+ |..++.+++|+.|++++|++++.+|..
T Consensus 517 ~N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 517 NNRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp SSCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCT
T ss_pred CCCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHH
Confidence 99999887 999999999999999999999987754
No 303
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.52 E-value=1.2e-14 Score=151.94 Aligned_cols=108 Identities=22% Similarity=0.281 Sum_probs=52.3
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCC-CCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSG-HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~-~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
++.|+|++|.+.+..|..+..+++|++|++++|.+++ .+|..++.+++|+.|++++|++++..|..+.++++|++|+|+
T Consensus 426 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls 505 (606)
T 3vq2_A 426 LLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNMS 505 (606)
T ss_dssp CCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECC
T ss_pred CCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEECC
Confidence 4444444444444444444444444444444444444 234444444455555555555444444444445555555555
Q ss_pred CccccccCchHHhhccccccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
+|++++.+|..+..+++|+.|++++|+++
T Consensus 506 ~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 534 (606)
T 3vq2_A 506 HNNLLFLDSSHYNQLYSLSTLDCSFNRIE 534 (606)
T ss_dssp SSCCSCEEGGGTTTCTTCCEEECTTSCCC
T ss_pred CCcCCCcCHHHccCCCcCCEEECCCCcCc
Confidence 55554444444444455555555555544
No 304
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.51 E-value=2e-14 Score=137.02 Aligned_cols=141 Identities=25% Similarity=0.313 Sum_probs=116.7
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccC--CCCChhhcCCCCCcEEEcc
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLS--GHIPSALGNLIKLKSLDLY 123 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ls 123 (447)
|.|.+|.|... ..++.|+|++|.++...+..+.++++|++|+|++|.++ +.+|..+..+++|++|+++
T Consensus 7 C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~Ls 86 (306)
T 2z66_A 7 CSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLDLS 86 (306)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEECC
T ss_pred eCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEECC
Confidence 78999999742 36999999999998544445789999999999999998 3447788889999999999
Q ss_pred CCcccccCCccccCCCCCCeeeCcCccccccCc-hHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 124 SNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIP-TSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 124 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
+|.++ .+|..+..+++|++|++++|++++..+ ..+..+++|+.|++++|.+++..|.. ..+..+..+.+.+|.
T Consensus 87 ~n~i~-~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 161 (306)
T 2z66_A 87 FNGVI-TMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNS 161 (306)
T ss_dssp SCSEE-EEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCE
T ss_pred CCccc-cChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCc
Confidence 99998 578889999999999999999987655 57888999999999999999877753 345666667776664
No 305
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.51 E-value=2.4e-14 Score=149.58 Aligned_cols=131 Identities=21% Similarity=0.212 Sum_probs=117.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|||++|.+++..|..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..++++++|++|++
T Consensus 33 ~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 112 (606)
T 3t6q_A 33 NSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLFF 112 (606)
T ss_dssp TTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEEC
T ss_pred CcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEeec
Confidence 46899999999999988999999999999999999999988999999999999999999999888999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccc-cCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSG-PVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..|..+..+++|+.|++++|.+++ .+|....+..++.+.+.+|.
T Consensus 113 ~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 164 (606)
T 3t6q_A 113 IQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNA 164 (606)
T ss_dssp TTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSC
T ss_pred cccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCc
Confidence 9999998778889999999999999999998 45665556666666666653
No 306
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.51 E-value=1.6e-14 Score=156.70 Aligned_cols=140 Identities=27% Similarity=0.300 Sum_probs=100.7
Q ss_pred CccceeEeCCCCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCC-ChhhcCCCCCcEEEccCCcccccCCcc
Q 013258 56 CTWFHITCNPEGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHI-PSALGNLIKLKSLDLYSNLFNGTIPDT 134 (447)
Q Consensus 56 c~w~gv~c~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~-p~~~~~l~~L~~L~ls~N~l~g~~p~~ 134 (447)
|.|..|.+ -..+++.|||++|.+++..|..+.++++|++|+|++|.+.+.+ |..|.++++|++|+|++|.+++..|..
T Consensus 14 ~~L~~vP~-lp~~l~~LdLs~N~i~~i~~~~~~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~ 92 (844)
T 3j0a_A 14 CNLTQVPQ-VLNTTERLLLSFNYIRTVTASSFPFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDA 92 (844)
T ss_dssp CCSSCCCS-SCTTCCEEEEESCCCCEECSSSCSSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTS
T ss_pred CCCCCCCC-CCCCcCEEECCCCcCCccChhHCcccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhH
Confidence 45666666 4467888888888888877777888888888888888666555 667788888888888888887777777
Q ss_pred ccCCCCCCeeeCcCccccccCchH--HhhcccccccccccccccccCCC--CCCCCcccccccccc
Q 013258 135 LANLKQLKYLRLNNNSLSGLIPTS--LTTITSLNILDLSNNRLSGPVPD--NGSFSQFTPISFENN 196 (447)
Q Consensus 135 ~~~l~~L~~L~l~~N~l~~~~p~~--~~~l~~L~~l~ls~N~l~g~~p~--~~~~~~~~~~~~~~n 196 (447)
|+++++|++|+|++|.+++.+|.. +.++++|+.|++++|.+++..|. .+.+.+++.+.+.+|
T Consensus 93 ~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N 158 (844)
T 3j0a_A 93 FQGLFHLFELRLYFCGLSDAVLKDGYFRNLKALTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSN 158 (844)
T ss_dssp SCSCSSCCCEECTTCCCSSCCSTTCCCSSCSSCCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESS
T ss_pred ccCCcccCEeeCcCCCCCcccccCccccccCCCCEEECCCCcccccccchhHhhCCCCCEEECCCC
Confidence 888888888888888877766654 77777778888888777765442 233444444444443
No 307
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.50 E-value=3.8e-14 Score=143.68 Aligned_cols=140 Identities=22% Similarity=0.285 Sum_probs=116.5
Q ss_pred cceeEeCC----------CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcc
Q 013258 58 WFHITCNP----------EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLF 127 (447)
Q Consensus 58 w~gv~c~~----------~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 127 (447)
|..|.|.. ...++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 56777752 13688999999999988888999999999999999999988899999999999999999999
Q ss_pred cccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 128 NGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 128 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
++..+..|.++++|++|+|++|++++..|..+..+++|+.|++++|.+++..|.. ..+..+..+.+.+|.
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 163 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCN 163 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCC
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCc
Confidence 8655566889999999999999999888889999999999999999998876643 334555556665553
No 308
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.50 E-value=4.1e-14 Score=133.97 Aligned_cols=129 Identities=25% Similarity=0.223 Sum_probs=113.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.+++..+..+..+++|++|+|++|.+++. |.. +.+++|+.|++++|+++ .+|..+..+++|++|+|
T Consensus 31 ~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~l 107 (290)
T 1p9a_G 31 KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLDV 107 (290)
T ss_dssp TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEEC
T ss_pred CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEECCCCcCC-cCchhhccCCCCCEEEC
Confidence 4689999999999998889999999999999999999964 433 78999999999999998 78999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNLN 198 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~~ 198 (447)
++|++++..|..|..+++|+.|++++|++++..+.. ..+..+..+.+.+|..
T Consensus 108 ~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 160 (290)
T 1p9a_G 108 SFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNL 160 (290)
T ss_dssp CSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred CCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcC
Confidence 999999888889999999999999999999776654 3456777777777753
No 309
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.50 E-value=2.4e-14 Score=127.50 Aligned_cols=124 Identities=17% Similarity=0.256 Sum_probs=60.2
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
++.|+|++|.+. .+| .+..+++|++|++++|.++ .++.+..+++|++|++++|++++..|..++.+++|++|++++
T Consensus 46 L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~ 121 (197)
T 4ezg_A 46 LTYITLANINVT-DLT-GIEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISH 121 (197)
T ss_dssp CCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCS
T ss_pred ccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecC
Confidence 455555555554 333 3555555555555555433 223455555555555555555544455555555555555555
Q ss_pred ccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
|++++..|..+..+++|+.|++++|.+.+.+|....+..+..+.+.+|
T Consensus 122 n~i~~~~~~~l~~l~~L~~L~L~~n~~i~~~~~l~~l~~L~~L~l~~n 169 (197)
T 4ezg_A 122 SAHDDSILTKINTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFD 169 (197)
T ss_dssp SBCBGGGHHHHTTCSSCCEEECCSCTBCCCCGGGGGCSSCCEEECTTB
T ss_pred CccCcHhHHHHhhCCCCCEEEccCCCCccccHhhcCCCCCCEEECCCC
Confidence 555544455555555555555555542223333333333444444333
No 310
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.50 E-value=1.3e-14 Score=141.83 Aligned_cols=135 Identities=22% Similarity=0.247 Sum_probs=111.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|+|++..+..|.++++|+.|+|++|++++..|..|.++++|+.|+|
T Consensus 64 ~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 143 (361)
T 2xot_A 64 TNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSNHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYL 143 (361)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cccCEEECCCCcCCccChhhccCCCCCCEEECCCCcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEEC
Confidence 57999999999999888888999999999999999999877778999999999999999999888999999999999999
Q ss_pred cCccccccCchHH---hhcccccccccccccccccCCCC-CCCCc--cccccccccccccC
Q 013258 147 NNNSLSGLIPTSL---TTITSLNILDLSNNRLSGPVPDN-GSFSQ--FTPISFENNLNLCG 201 (447)
Q Consensus 147 ~~N~l~~~~p~~~---~~l~~L~~l~ls~N~l~g~~p~~-~~~~~--~~~~~~~~n~~lc~ 201 (447)
++|++++..+..+ ..+++|+.|++++|+|++..+.. ..+.. +..+.+.+|+..|.
T Consensus 144 ~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~~~l~~l~l~~N~~~C~ 204 (361)
T 2xot_A 144 SQNQISRFPVELIKDGNKLPKLMLLDLSSNKLKKLPLTDLQKLPAWVKNGLYLHNNPLECD 204 (361)
T ss_dssp CSSCCCSCCGGGTC----CTTCCEEECCSSCCCCCCHHHHHHSCHHHHTTEECCSSCEECC
T ss_pred CCCcCCeeCHHHhcCcccCCcCCEEECCCCCCCccCHHHhhhccHhhcceEEecCCCccCC
Confidence 9999997555555 67899999999999998644321 11221 24456777776664
No 311
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.50 E-value=2.9e-14 Score=148.76 Aligned_cols=129 Identities=22% Similarity=0.221 Sum_probs=77.6
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
.++.++++++.+.+..+..+..+++|+.|+|++|.+++..|..|+.+++|+.|+|++|.+++..|..|+++++|++|+|+
T Consensus 52 ~l~~l~l~~~~l~~lp~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 131 (597)
T 3oja_B 52 NQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLE 131 (597)
T ss_dssp CCSEEEESSCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CceEEEeeCCCCCCcCHHHHccCCCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEee
Confidence 34556666666654444445566666666666666666555566666666666666666666555556666666666666
Q ss_pred CccccccCchHHhhcccccccccccccccccCCC-CCCCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 196 (447)
+|.+++.++..|+.+++|+.|++++|.+++.+|. ...+..+..+.+.+|
T Consensus 132 ~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N 181 (597)
T 3oja_B 132 RNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSN 181 (597)
T ss_dssp SSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECTTS
T ss_pred CCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhhhhcCCcCcEEECcCC
Confidence 6666654444456666666666666666665553 233444444444444
No 312
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.50 E-value=3.7e-14 Score=126.31 Aligned_cols=127 Identities=17% Similarity=0.247 Sum_probs=109.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+. .++.+..+++|++|++++|.+++..|..++.+++|++|++++|++++..|..++.+++|++|++
T Consensus 66 ~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~~L~L 143 (197)
T 4ezg_A 66 HNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVNSIDL 143 (197)
T ss_dssp TTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCCEEEC
T ss_pred CCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCCEEEc
Confidence 47999999999654 4568999999999999999999888999999999999999999999888999999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|.+.+.+| .+..+++|+.|++++|.+++. +....+..++.+.+.+|.
T Consensus 144 ~~n~~i~~~~-~l~~l~~L~~L~l~~n~i~~~-~~l~~l~~L~~L~l~~N~ 192 (197)
T 4ezg_A 144 SYNGAITDIM-PLKTLPELKSLNIQFDGVHDY-RGIEDFPKLNQLYAFSQT 192 (197)
T ss_dssp CSCTBCCCCG-GGGGCSSCCEEECTTBCCCCC-TTGGGCSSCCEEEECBC-
T ss_pred cCCCCccccH-hhcCCCCCCEEECCCCCCcCh-HHhccCCCCCEEEeeCcc
Confidence 9998444566 689999999999999999873 444456677777777764
No 313
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.49 E-value=7.6e-14 Score=130.96 Aligned_cols=114 Identities=23% Similarity=0.284 Sum_probs=82.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..+.++++|+.|++++|++++..+..++.+++|++|++
T Consensus 52 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 131 (276)
T 2z62_A 52 PELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNV 131 (276)
T ss_dssp TTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEEC
T ss_pred cCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCCCCCEEEC
Confidence 45777777777777666666777777777777777777666677777777777777777777655556777777777777
Q ss_pred cCcccccc-CchHHhhcccccccccccccccccCC
Q 013258 147 NNNSLSGL-IPTSLTTITSLNILDLSNNRLSGPVP 180 (447)
Q Consensus 147 ~~N~l~~~-~p~~~~~l~~L~~l~ls~N~l~g~~p 180 (447)
++|++++. +|..+..+++|+.|++++|++++..+
T Consensus 132 ~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~ 166 (276)
T 2z62_A 132 AHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYC 166 (276)
T ss_dssp CSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECG
T ss_pred cCCccceecCchhhccCCCCCEEECCCCCCCcCCH
Confidence 77777653 57777777777777777777776543
No 314
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.49 E-value=5e-14 Score=141.94 Aligned_cols=130 Identities=19% Similarity=0.261 Sum_probs=106.2
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.+++..+..+.++++|+.|+|++|.+++..|..|.++++|++|+|++|++++..+..+.++++|++|+|
T Consensus 75 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 154 (452)
T 3zyi_A 75 SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWL 154 (452)
T ss_dssp TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEEC
T ss_pred CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEEC
Confidence 36899999999999988999999999999999999999888899999999999999999999766677999999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC--CCCCcccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN--GSFSQFTPISFENN 196 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n 196 (447)
++|++++..+..+..+++|+.|++++|+..+.+|.. ..+..+..+.+.+|
T Consensus 155 ~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 206 (452)
T 3zyi_A 155 RNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMC 206 (452)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTS
T ss_pred CCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCC
Confidence 999999777777777778888888775444444432 23344444455444
No 315
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.48 E-value=5.8e-14 Score=146.94 Aligned_cols=135 Identities=21% Similarity=0.329 Sum_probs=119.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccC-CCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLS-GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
..+..++++.|.+.+..+..+..++.|+.|+|++|.+. +.+|..|..+++|+.|+|++|++++..|..|.++++|++|+
T Consensus 445 ~~l~~l~ls~n~l~~~~~~~~~~~~~L~~L~Ls~N~~~~~~~~~~~~~l~~L~~L~Ls~N~L~~l~~~~f~~l~~L~~L~ 524 (635)
T 4g8a_A 445 RNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLN 524 (635)
T ss_dssp TTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEE
T ss_pred cccccccccccccccccccccccchhhhhhhhhhcccccccCchhhhhccccCEEECCCCccCCcChHHHcCCCCCCEEE
Confidence 35778899999999888888999999999999999854 56788899999999999999999998899999999999999
Q ss_pred CcCccccccCchHHhhcccccccccccccccccCCCCC-CC-CccccccccccccccC
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG-SF-SQFTPISFENNLNLCG 201 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~-~~-~~~~~~~~~~n~~lc~ 201 (447)
|++|++++..|..+..+++|+.||+++|++++.+|+.. .+ .+++.+++.+|+..|.
T Consensus 525 Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~l~~~L~~L~L~~Np~~C~ 582 (635)
T 4g8a_A 525 MSHNNFFSLDTFPYKCLNSLQVLDYSLNHIMTSKKQELQHFPSSLAFLNLTQNDFACT 582 (635)
T ss_dssp CTTSCCCBCCCGGGTTCTTCCEEECTTSCCCBCCSSCTTCCCTTCCEEECTTCCBCCS
T ss_pred CCCCcCCCCChhHHhCCCCCCEEECCCCcCCCCCHHHHHhhhCcCCEEEeeCCCCccc
Confidence 99999999999999999999999999999999888753 23 5677788999998874
No 316
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.48 E-value=1.7e-14 Score=155.45 Aligned_cols=130 Identities=22% Similarity=0.339 Sum_probs=116.5
Q ss_pred CCEEEEEcCCCCccc-----------------ccccccc--CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCc-
Q 013258 67 GSVTRVDLGNAALSG-----------------ELAPELG--QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL- 126 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g-----------------~~~~~l~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~- 126 (447)
.+++.|+|++|.++| .+|+.++ +|++|++|+|++|.+.+.+|..|+++++|+.|+|++|+
T Consensus 448 ~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~ 527 (876)
T 4ecn_A 448 TKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRG 527 (876)
T ss_dssp TTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTT
T ss_pred CCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEEECcCCCC
Confidence 579999999999999 4999988 99999999999999999999999999999999999998
Q ss_pred ccc-cCCccccCCC-------CCCeeeCcCccccccCch--HHhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 127 FNG-TIPDTLANLK-------QLKYLRLNNNSLSGLIPT--SLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 127 l~g-~~p~~~~~l~-------~L~~L~l~~N~l~~~~p~--~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
++| .+|..+++++ +|+.|+|++|+++ .+|. .++.+++|+.|++++|.++ .+|..+.+..+..+.+.+|
T Consensus 528 lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp~~~~L~~L~~L~Ls~N 605 (876)
T 4ecn_A 528 ISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLEAFGTNVKLTDLKLDYN 605 (876)
T ss_dssp SCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCCCCCTTSEESEEECCSS
T ss_pred cccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cchhhcCCCcceEEECcCC
Confidence 998 8998777666 9999999999999 7888 9999999999999999999 8886666677777777776
Q ss_pred cc
Q 013258 197 LN 198 (447)
Q Consensus 197 ~~ 198 (447)
..
T Consensus 606 ~l 607 (876)
T 4ecn_A 606 QI 607 (876)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 317
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.48 E-value=2.1e-14 Score=152.74 Aligned_cols=109 Identities=27% Similarity=0.426 Sum_probs=66.2
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
++.|+|++|.+. .+|+.+..+++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|++|++|++|+|++
T Consensus 226 L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~ 302 (727)
T 4b8c_D 226 WHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCFQLKYFYFFD 302 (727)
T ss_dssp CCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGTTCSEEECCS
T ss_pred CcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCCCCCEEECCC
Confidence 445555665555 45555556666666666666666 55666666666666666666666 5566666666666666666
Q ss_pred ccccccCchHHhhcccccccccccccccccCCC
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
|.++ .+|..|+.+++|+.|+|++|.|++.+|.
T Consensus 303 N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~ 334 (727)
T 4b8c_D 303 NMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLK 334 (727)
T ss_dssp SCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHH
T ss_pred CCCC-ccChhhhcCCCccEEeCCCCccCCCChH
Confidence 6664 4455566666666666666666655554
No 318
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.47 E-value=2.5e-14 Score=155.23 Aligned_cols=130 Identities=28% Similarity=0.348 Sum_probs=99.8
Q ss_pred CEEEEEcCCCCccccccc-cccCCCCCCEEECCCCccC-----CCCChhhcCCCCCcEEEccCCcccccCCccccCCCCC
Q 013258 68 SVTRVDLGNAALSGELAP-ELGQLKNLELLELYGNNLS-----GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQL 141 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~-~l~~l~~L~~L~L~~N~l~-----~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L 141 (447)
+++.|+|++|.+++..+. .+..+++|+.|+|++|.++ +..|..|.++++|+.|+|++|++++..|..+.++++|
T Consensus 427 ~L~~L~Ls~N~l~~~~~~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L 506 (844)
T 3j0a_A 427 HLQILILNQNRFSSCSGDQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTAL 506 (844)
T ss_dssp TCCEEEEESCCCCCCCSSSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSC
T ss_pred ccceeeCCCCcccccccccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhh
Confidence 466666666666654332 2445677777777777776 3445567888899999999999988888888899999
Q ss_pred CeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccccccC
Q 013258 142 KYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 142 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~ 201 (447)
+.|+|++|++++..|..+. ++|+.|++++|++++.+|+. +..+..+++.+|+..|.
T Consensus 507 ~~L~Ls~N~l~~l~~~~~~--~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~ 562 (844)
T 3j0a_A 507 RGLSLNSNRLTVLSHNDLP--ANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICE 562 (844)
T ss_dssp SEEEEESCCCSSCCCCCCC--SCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCS
T ss_pred heeECCCCCCCccChhhhh--ccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccc
Confidence 9999999999887766655 78999999999999888864 56778888999988884
No 319
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.47 E-value=7.3e-14 Score=135.60 Aligned_cols=109 Identities=25% Similarity=0.237 Sum_probs=95.3
Q ss_pred CccceeEeCCCCCEEEEEcCCC-CccccccccccCCCCCCEEECCC-CccCCCCChhhcCCCCCcEEEccCCcccccCCc
Q 013258 56 CTWFHITCNPEGSVTRVDLGNA-ALSGELAPELGQLKNLELLELYG-NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD 133 (447)
Q Consensus 56 c~w~gv~c~~~~~v~~l~L~~~-~l~g~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~ 133 (447)
|.|..|.|. ++ ++++ +|+ |..+++|+.|+|++ |.|++..|..|++|++|+.|+|++|+|++..|.
T Consensus 8 C~~~~v~~~-----------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~ 74 (347)
T 2ifg_A 8 HGSSGLRCT-----------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPD 74 (347)
T ss_dssp SSSSCEECC-----------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTT
T ss_pred ccCCEEEcC-----------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHH
Confidence 777766664 44 6664 788 99999999999996 999988888999999999999999999998888
Q ss_pred cccCCCCCCeeeCcCccccccCchHHhhccccccccccccccccc
Q 013258 134 TLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 178 (447)
Q Consensus 134 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 178 (447)
.|.++++|+.|+|++|+|++..|..+..++ |+.|++++|++...
T Consensus 75 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 75 AFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHCS 118 (347)
T ss_dssp GGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCCC
T ss_pred HhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccCC
Confidence 999999999999999999987776666665 99999999999864
No 320
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.47 E-value=1.7e-13 Score=132.21 Aligned_cols=139 Identities=22% Similarity=0.282 Sum_probs=116.4
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN 125 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 125 (447)
|.|..+.|... ..++.|+|++|.+.+..|..+.++++|++|+|++|.+++..|..|.++++|++|++++|
T Consensus 33 c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n 112 (332)
T 2ft3_A 33 CHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKN 112 (332)
T ss_dssp EETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSS
T ss_pred ccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCC
Confidence 67999998632 36899999999999888889999999999999999999888999999999999999999
Q ss_pred cccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccc--cCCCCCCCCccccccccccc
Q 013258 126 LFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG--PVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 126 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g--~~p~~~~~~~~~~~~~~~n~ 197 (447)
+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..|.......+..+.+.+|.
T Consensus 113 ~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~ 183 (332)
T 2ft3_A 113 HLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAK 183 (332)
T ss_dssp CCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSB
T ss_pred cCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCC
Confidence 998 6787765 899999999999998777789999999999999999963 44443221155555565554
No 321
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.47 E-value=2.9e-14 Score=151.77 Aligned_cols=110 Identities=21% Similarity=0.269 Sum_probs=67.6
Q ss_pred cccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcc
Q 013258 84 APELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT 163 (447)
Q Consensus 84 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~ 163 (447)
+..+..+.+|+.|+|++|.+. .+|..+.++++|++|+|++|.|+ .+|..|+++++|++|+|++|.|+ .+|..++.++
T Consensus 217 ~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~ 293 (727)
T 4b8c_D 217 KDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGSCF 293 (727)
T ss_dssp -----CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGGGT
T ss_pred hhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcCCC
Confidence 445666666777777777666 56666666677777777777766 66666666777777777777766 5566666666
Q ss_pred cccccccccccccccCCC-CCCCCccccccccccc
Q 013258 164 SLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 164 ~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
+|+.|+|++|.|+ .+|. .+.+..+..+.+.+|.
T Consensus 294 ~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~ 327 (727)
T 4b8c_D 294 QLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNP 327 (727)
T ss_dssp TCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSC
T ss_pred CCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCc
Confidence 7777777777665 3443 3344455555555543
No 322
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.46 E-value=8.4e-14 Score=137.42 Aligned_cols=131 Identities=21% Similarity=0.223 Sum_probs=100.6
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+++++.+....+..+..+++|++|+|++|.+++..|..|..+++|++|+|++|.+++..|..++++++|++|+|
T Consensus 45 ~~l~~l~l~~~~l~~l~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 124 (390)
T 3o6n_A 45 NNQKIVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVL 124 (390)
T ss_dssp CCCSEEEEESCEESEECTHHHHHCCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCceEEEecCCchhhCChhHhcccccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEEC
Confidence 35677888888877544444678888888888888888777778888888888888888888777777888888888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
++|+++...+..+..+++|+.|++++|.+++..|.. ..+..++.+.+.+|.
T Consensus 125 ~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 176 (390)
T 3o6n_A 125 ERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNLQLSSNR 176 (390)
T ss_dssp CSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCCCCCCEEECCCCc
Confidence 888888655555678888888888888888766642 345566666666654
No 323
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.46 E-value=1e-13 Score=143.53 Aligned_cols=129 Identities=24% Similarity=0.314 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCC-hhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIP-SALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.+.+..+. +..+++|++|++++|.+.+..| ..+.++++|+.|++++|.+.+..|..+.++++|++|+
T Consensus 373 ~~L~~L~l~~n~l~~~~~~-~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~ 451 (570)
T 2z63_A 373 TSLKYLDLSFNGVITMSSN-FLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLK 451 (570)
T ss_dssp SCCCEEECCSCSEEEEEEE-EETCTTCCEEECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEE
T ss_pred CccCEEECCCCcccccccc-ccccCCCCEEEccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEE
Confidence 3566666666666543332 5555555555555555554433 3445555555555555555555555555555555555
Q ss_pred CcCcccc-ccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccc
Q 013258 146 LNNNSLS-GLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 146 l~~N~l~-~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 196 (447)
+++|.++ +.+|..+..+++|+.|++++|++++..|.. ..+..+..+.+.+|
T Consensus 452 l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n 504 (570)
T 2z63_A 452 MAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMASN 504 (570)
T ss_dssp CTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred CcCCcCccccchhhhhcccCCCEEECCCCccccCChhhhhcccCCCEEeCCCC
Confidence 5555554 344555555555555555555555544432 22334444444444
No 324
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.46 E-value=8.8e-14 Score=144.03 Aligned_cols=126 Identities=19% Similarity=0.194 Sum_probs=108.3
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|+++ .+|.. .+++|++|+|
T Consensus 52 ~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~-~lp~~--~l~~L~~L~L 128 (562)
T 3a79_B 52 PRTKALSLSQNSISELRMPDISFLSELRVLRLSHNRIRSLDFHVFLFNQDLEYLDVSHNRLQ-NISCC--PMASLRHLDL 128 (562)
T ss_dssp TTCCEEECCSSCCCCCCGGGTTTCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECTTSCCC-EECSC--CCTTCSEEEC
T ss_pred CCcCEEECCCCCccccChhhhccCCCccEEECCCCCCCcCCHHHhCCCCCCCEEECCCCcCC-ccCcc--ccccCCEEEC
Confidence 57999999999999888889999999999999999999888999999999999999999998 67877 8999999999
Q ss_pred cCccccc-cCchHHhhcccccccccccccccccCCCCCCCCcc--ccccccccc
Q 013258 147 NNNSLSG-LIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQF--TPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~-~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~--~~~~~~~n~ 197 (447)
++|++++ .+|..++++++|+.|++++|.+++. ....+..+ +.+.+.+|.
T Consensus 129 s~N~l~~l~~p~~~~~l~~L~~L~L~~n~l~~~--~~~~l~~L~L~~L~L~~n~ 180 (562)
T 3a79_B 129 SFNDFDVLPVCKEFGNLTKLTFLGLSAAKFRQL--DLLPVAHLHLSCILLDLVS 180 (562)
T ss_dssp CSSCCSBCCCCGGGGGCTTCCEEEEECSBCCTT--TTGGGTTSCEEEEEEEESS
T ss_pred CCCCccccCchHhhcccCcccEEecCCCccccC--chhhhhhceeeEEEeeccc
Confidence 9999987 4578999999999999999999863 22223333 555555553
No 325
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.46 E-value=1.5e-13 Score=131.86 Aligned_cols=130 Identities=18% Similarity=0.162 Sum_probs=75.0
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhc-CCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALG-NLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.++.|+|++|.+++..+..+..+++|++|+|++|.+++..|..+. .+++|+.|+|++|.+++. |. ...+++|++|+|
T Consensus 121 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~-~~~l~~L~~L~L 198 (317)
T 3o53_A 121 GKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KG-QVVFAKLKTLDL 198 (317)
T ss_dssp SCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-EC-CCCCTTCCEEEC
T ss_pred CCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-cc-ccccccCCEEEC
Confidence 455666666666655555566666666666666666655555543 566666666666666543 22 223666666666
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLC 200 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc 200 (447)
++|++++. |..+..+++|+.|++++|++++..+....+..+..+.+.+|+..|
T Consensus 199 s~N~l~~l-~~~~~~l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~ 251 (317)
T 3o53_A 199 SSNKLAFM-GPEFQSAAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHC 251 (317)
T ss_dssp CSSCCCEE-CGGGGGGTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBH
T ss_pred CCCcCCcc-hhhhcccCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccC
Confidence 66666643 334666666666666666666433333344455555555555443
No 326
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.46 E-value=1.4e-13 Score=145.78 Aligned_cols=130 Identities=25% Similarity=0.246 Sum_probs=106.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..++++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 25 ~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 104 (680)
T 1ziw_A 25 TNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELHL 104 (680)
T ss_dssp TTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEEC
T ss_pred CCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEEC
Confidence 46889999999998877778899999999999999999888888999999999999999998544446888999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 196 (447)
++|++++..|..++.+++|+.|++++|.+++..|.. ..+..++.+.+.+|
T Consensus 105 ~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n 155 (680)
T 1ziw_A 105 MSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNN 155 (680)
T ss_dssp CSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSS
T ss_pred CCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCC
Confidence 999998877788888999999999999988876653 23445555555444
No 327
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.45 E-value=1e-13 Score=127.31 Aligned_cols=129 Identities=22% Similarity=0.259 Sum_probs=108.6
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCc-cCCCCChhhcCCCCCcEEEccC-CcccccCCccccCCCCCCee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNN-LSGHIPSALGNLIKLKSLDLYS-NLFNGTIPDTLANLKQLKYL 144 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L 144 (447)
..++.|+|++|++++..+..+..+++|++|++++|. +++..+..|.++++|++|++++ |++++..+..|.++++|++|
T Consensus 31 ~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L 110 (239)
T 2xwt_C 31 PSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFL 110 (239)
T ss_dssp TTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEE
T ss_pred CcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEE
Confidence 478999999999998777789999999999999997 8866666899999999999998 99997667789999999999
Q ss_pred eCcCccccccCchHHhhccccc---ccccccc-cccccCCCC-CCCCccc-cccccccc
Q 013258 145 RLNNNSLSGLIPTSLTTITSLN---ILDLSNN-RLSGPVPDN-GSFSQFT-PISFENNL 197 (447)
Q Consensus 145 ~l~~N~l~~~~p~~~~~l~~L~---~l~ls~N-~l~g~~p~~-~~~~~~~-~~~~~~n~ 197 (447)
++++|++++ +|. +..+++|+ .|++++| .+++..+.. ..+..+. .+.+.+|.
T Consensus 111 ~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~ 167 (239)
T 2xwt_C 111 GIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNG 167 (239)
T ss_dssp EEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCC
T ss_pred eCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCC
Confidence 999999987 666 88888888 9999999 888766542 3455666 66666653
No 328
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.45 E-value=1.1e-13 Score=117.20 Aligned_cols=104 Identities=25% Similarity=0.282 Sum_probs=94.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccccc-CCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT-IPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.+++. +.+..+++|++|+|++|.+++.+|..+..+++|+.|++++|.+++. .|..++.+++|++|+
T Consensus 42 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~ls~N~i~~~~~~~~~~~l~~L~~L~ 119 (149)
T 2je0_A 42 EELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHLNLSGNKIKDLSTIEPLKKLENLKSLD 119 (149)
T ss_dssp TTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEEECTTSCCCSHHHHGGGGGCTTCCEEE
T ss_pred CCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEEECCCCcCCChHHHHHHhhCCCCCEEe
Confidence 5799999999999976 7899999999999999999988999888999999999999999863 458899999999999
Q ss_pred CcCccccccCc---hHHhhccccccccccc
Q 013258 146 LNNNSLSGLIP---TSLTTITSLNILDLSN 172 (447)
Q Consensus 146 l~~N~l~~~~p---~~~~~l~~L~~l~ls~ 172 (447)
+++|++++..+ ..+..+++|+.||+++
T Consensus 120 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 120 LFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp CTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred CcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 99999998766 5899999999999874
No 329
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.44 E-value=1.7e-13 Score=118.63 Aligned_cols=110 Identities=25% Similarity=0.254 Sum_probs=98.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccccc-CCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT-IPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~-~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.+++. +.+..+++|++|+|++|.+++.+|..+.++++|+.|++++|.+++. .+..+..+++|++|+
T Consensus 49 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~l~~l~~L~~L~ 126 (168)
T 2ell_A 49 VNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHLNLSGNKLKDISTLEPLKKLECLKSLD 126 (168)
T ss_dssp GGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEEECBSSSCCSSGGGGGGSSCSCCCEEE
T ss_pred CCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEEeccCCccCcchhHHHHhcCCCCCEEE
Confidence 4689999999999876 7899999999999999999988999888899999999999999853 227899999999999
Q ss_pred CcCccccccCc---hHHhhccccccccccccccccc
Q 013258 146 LNNNSLSGLIP---TSLTTITSLNILDLSNNRLSGP 178 (447)
Q Consensus 146 l~~N~l~~~~p---~~~~~l~~L~~l~ls~N~l~g~ 178 (447)
+++|.+++..+ ..+..+++|+.|++++|.+...
T Consensus 127 l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~~~ 162 (168)
T 2ell_A 127 LFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQEA 162 (168)
T ss_dssp CCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSCBC
T ss_pred eeCCcCcchHHHHHHHHHhCccCcEecCCCCChhhc
Confidence 99999997665 5889999999999999998753
No 330
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.44 E-value=8.8e-14 Score=145.24 Aligned_cols=115 Identities=26% Similarity=0.302 Sum_probs=78.5
Q ss_pred CCEEEEEcCCCCcccccccc-ccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccccc---CCccccCCCCCC
Q 013258 67 GSVTRVDLGNAALSGELAPE-LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT---IPDTLANLKQLK 142 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~-l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~---~p~~~~~l~~L~ 142 (447)
..++.|+|++|.+.+..++. +..+++|+.|++++|.+++..|..+..+++|+.|++++|++++. .+..+..+++|+
T Consensus 400 ~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~ 479 (606)
T 3t6q_A 400 PQLELLDLAFTRLKVKDAQSPFQNLHLLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLE 479 (606)
T ss_dssp TTCSEEECTTCCEECCTTCCTTTTCTTCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCC
T ss_pred ccCCeEECCCCcCCCcccchhhhCcccCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCcc
Confidence 35677777777777665544 66777777777777777766676777777777777777777652 234566677777
Q ss_pred eeeCcCccccccCchHHhhcccccccccccccccccCCC
Q 013258 143 YLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 143 ~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
+|++++|++++..|..+..+++|+.|++++|++++.+|+
T Consensus 480 ~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 518 (606)
T 3t6q_A 480 ILVLSFCDLSSIDQHAFTSLKMMNHVDLSHNRLTSSSIE 518 (606)
T ss_dssp EEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCGGGGG
T ss_pred EEECCCCccCccChhhhccccCCCEEECCCCccCcCChh
Confidence 777777777766666677777777777777777665553
No 331
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.44 E-value=1.8e-13 Score=142.83 Aligned_cols=112 Identities=22% Similarity=0.207 Sum_probs=103.8
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.+.+..|..++.+++|++|+|++|.+++..|..|+++++|++|+|++|.+++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 36899999999999988889999999999999999999988888999999999999999999655555799999999999
Q ss_pred cCccccccCchHHhhccccccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGP 178 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 178 (447)
++|.+++.+|..+..+++|+.|++++|.+++.
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 186 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHV 186 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCc
Confidence 99999999999999999999999999999875
No 332
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.44 E-value=2.4e-13 Score=136.48 Aligned_cols=139 Identities=20% Similarity=0.302 Sum_probs=108.7
Q ss_pred cceeEeCC----------CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcc
Q 013258 58 WFHITCNP----------EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLF 127 (447)
Q Consensus 58 w~gv~c~~----------~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 127 (447)
|..|.|.. ...++.|+|++|.+.+..+..+.++++|++|+|++|.+++..|..|.++++|+.|+|++|++
T Consensus 45 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 45 FSKVICVRKNLREVPDGISTNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp SCEEECCSCCCSSCCSCCCTTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 55677753 13578899999999988888899999999999999999987778899999999999999999
Q ss_pred cccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCC--CCCCcccccccccc
Q 013258 128 NGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN--GSFSQFTPISFENN 196 (447)
Q Consensus 128 ~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~--~~~~~~~~~~~~~n 196 (447)
++..+..+..+++|++|+|++|+++...+..+..+++|+.|++++|+..+.+|.. ..+..+..+.+.+|
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n 195 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMC 195 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTS
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCC
Confidence 8665667889999999999999998777777778888888888875544444432 23444555555544
No 333
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.44 E-value=3.1e-13 Score=130.19 Aligned_cols=140 Identities=22% Similarity=0.373 Sum_probs=116.1
Q ss_pred CCccceeEeCC----------CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccC
Q 013258 55 LCTWFHITCNP----------EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYS 124 (447)
Q Consensus 55 ~c~w~gv~c~~----------~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~ 124 (447)
.|.|..+.|.. ...++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|++++
T Consensus 30 ~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~ 109 (330)
T 1xku_A 30 QCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSK 109 (330)
T ss_dssp EEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred cCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCC
Confidence 35789898863 13688999999999988777899999999999999999988899999999999999999
Q ss_pred CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccc--cCCCC-CCCCccccccccccc
Q 013258 125 NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG--PVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 125 N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g--~~p~~-~~~~~~~~~~~~~n~ 197 (447)
|+++ .+|..+. ++|++|++++|++++..+..+..+++|+.|++++|.++. ..+.. ..+..+..+.+.+|.
T Consensus 110 n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~ 182 (330)
T 1xku_A 110 NQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTN 182 (330)
T ss_dssp SCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSC
T ss_pred CcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCc
Confidence 9998 6787664 789999999999998888889999999999999999964 33322 234455555555553
No 334
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.44 E-value=5.6e-14 Score=134.45 Aligned_cols=109 Identities=21% Similarity=0.275 Sum_probs=72.9
Q ss_pred CCEEEEEcCCCCccccccccc--cCCCCCCEEECCCCccCCCCChhhcCC-----CCCcEEEccCCcccccCCccccCCC
Q 013258 67 GSVTRVDLGNAALSGELAPEL--GQLKNLELLELYGNNLSGHIPSALGNL-----IKLKSLDLYSNLFNGTIPDTLANLK 139 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~~l~ 139 (447)
.+++.|+|++|.++|.+|..+ ..+++|++|+|++|.+++. |..++.+ ++|++|+|++|++++..|..++.++
T Consensus 95 ~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~ 173 (312)
T 1wwl_A 95 SGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFP 173 (312)
T ss_dssp SCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCS
T ss_pred CCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCC
Confidence 356777777777777777665 6677777777777777765 6666665 6777777777777666556677777
Q ss_pred CCCeeeCcCcccccc--CchHH--hhccccccccccccccc
Q 013258 140 QLKYLRLNNNSLSGL--IPTSL--TTITSLNILDLSNNRLS 176 (447)
Q Consensus 140 ~L~~L~l~~N~l~~~--~p~~~--~~l~~L~~l~ls~N~l~ 176 (447)
+|++|+|++|++.+. +|..+ ..+++|+.|++++|.++
T Consensus 174 ~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~ 214 (312)
T 1wwl_A 174 ALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGME 214 (312)
T ss_dssp SCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCC
T ss_pred CCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCc
Confidence 777777777776554 23333 55666666666666666
No 335
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.43 E-value=1.2e-13 Score=120.62 Aligned_cols=124 Identities=20% Similarity=0.212 Sum_probs=90.2
Q ss_pred CCEEEEEcCCCCccccccccccCCC-CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLK-NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
..++.|+|++|.+.. +| .+..+. +|+.|+|++|.+++. ..+..+++|++|++++|++++..|..+..+++|++|+
T Consensus 19 ~~L~~L~l~~n~l~~-i~-~~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~ 94 (176)
T 1a9n_A 19 VRDRELDLRGYKIPV-IE-NLGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELI 94 (176)
T ss_dssp TSCEEEECTTSCCCS-CC-CGGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEE
T ss_pred CCceEEEeeCCCCch-hH-HhhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEE
Confidence 367888888888884 44 455555 888999998888864 5788888899999999988854334458888889999
Q ss_pred CcCccccccCch--HHhhcccccccccccccccccCCC-----CCCCCcccccccccc
Q 013258 146 LNNNSLSGLIPT--SLTTITSLNILDLSNNRLSGPVPD-----NGSFSQFTPISFENN 196 (447)
Q Consensus 146 l~~N~l~~~~p~--~~~~l~~L~~l~ls~N~l~g~~p~-----~~~~~~~~~~~~~~n 196 (447)
+++|+++ .+|. .+..+++|+.|++++|.++.. |. ...+..+..+++.+|
T Consensus 95 L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n 150 (176)
T 1a9n_A 95 LTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKV 150 (176)
T ss_dssp CCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEEC
T ss_pred CCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcC
Confidence 9988885 4565 778888888889988888743 33 223444444444444
No 336
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.42 E-value=3.5e-13 Score=138.08 Aligned_cols=129 Identities=22% Similarity=0.304 Sum_probs=99.0
Q ss_pred CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCC--CCChhhcCCCCCcEEEccCCcccccCCcc-ccCCCCCC
Q 013258 66 EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLK 142 (447)
Q Consensus 66 ~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~ 142 (447)
...++.|+|++|.+++.+|..+..+++|+.|+|++|++++ .+|..+..+++|+.|++++|.+++.+|.. +..+++|+
T Consensus 323 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~L~ 402 (520)
T 2z7x_B 323 ISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKSLL 402 (520)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTTCC
T ss_pred CCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCccCC
Confidence 3568899999999998888888999999999999999986 56778888999999999999998767764 67778888
Q ss_pred eeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 143 YLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 143 ~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
+|++++|++++.+|..+. ++|+.|++++|+++ .+|. ...+..+..+.+.+|.
T Consensus 403 ~L~Ls~N~l~~~~~~~l~--~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~ 455 (520)
T 2z7x_B 403 SLNMSSNILTDTIFRCLP--PRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQ 455 (520)
T ss_dssp EEECCSSCCCGGGGGSCC--TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSC
T ss_pred EEECcCCCCCcchhhhhc--ccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCc
Confidence 888888888776665543 56777777777777 4443 3345556666666654
No 337
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.41 E-value=5e-13 Score=116.02 Aligned_cols=101 Identities=21% Similarity=0.263 Sum_probs=89.1
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN 125 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 125 (447)
|+|..+.|... ..++.|+|++|.+++..|..+..+++|++|+|++|+|++..|..|.++++|+.|+|++|
T Consensus 9 C~~~~l~~s~n~l~~ip~~~~~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N 88 (170)
T 3g39_A 9 CSGTTVDCSGKSLASVPTGIPTTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDN 88 (170)
T ss_dssp EETTEEECTTSCCSSCCSCCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cCCCEEEeCCCCcCccCccCCCCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCC
Confidence 56777877531 36889999999999988999999999999999999999877777899999999999999
Q ss_pred cccccCCccccCCCCCCeeeCcCccccccCc
Q 013258 126 LFNGTIPDTLANLKQLKYLRLNNNSLSGLIP 156 (447)
Q Consensus 126 ~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p 156 (447)
++++..|..+..+++|++|+|++|.++...+
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~~~c~c~ 119 (170)
T 3g39_A 89 QLKSIPRGAFDNLKSLTHIWLLNNPWDCACS 119 (170)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCBCTTBG
T ss_pred ccCEeCHHHhcCCCCCCEEEeCCCCCCCCch
Confidence 9997666679999999999999999987543
No 338
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.41 E-value=2.5e-13 Score=140.57 Aligned_cols=129 Identities=18% Similarity=0.243 Sum_probs=80.7
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|.+++..+..+.++++|++|+|++|.+++..|..|.++++|++|+|++|++++..|..|+++++|++|+++
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 56667777777766666666677777777777777666556666667777777777777665555666666666666666
Q ss_pred CccccccCchHHhhcccccccccccccccc-cCCCC-CCCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSG-PVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g-~~p~~-~~~~~~~~~~~~~n 196 (447)
+|++++..+..++.+++|+.|++++|.+++ .+|.. +.+..++.+++.+|
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n 159 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSN 159 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTS
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCC
Confidence 666665444456666666666666666665 33432 22344444444444
No 339
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.41 E-value=4.4e-13 Score=132.23 Aligned_cols=127 Identities=21% Similarity=0.208 Sum_probs=109.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCcc-ccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~~L~ 145 (447)
.+++.|+|++|.+.+..+..+..+++|++|+|++|.+++..|..++++++|++|++++|+++. +|.. +.++++|++|+
T Consensus 69 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 69 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSS-LPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC-CCTTTTTTCTTCCEEE
T ss_pred ccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCc-CCHHHhcCCCCCcEEE
Confidence 468999999999998888899999999999999999998888889999999999999999994 5554 68999999999
Q ss_pred CcCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
+++|++++..|..+..+++|+.|++++|.+++.. ...+..+..+.+.+|
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~--~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVD--LSLIPSLFHANVSYN 196 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCC--GGGCTTCSEEECCSS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccc--cccccccceeecccc
Confidence 9999999988888999999999999999998752 233455555555554
No 340
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.40 E-value=2.3e-13 Score=137.97 Aligned_cols=130 Identities=19% Similarity=0.210 Sum_probs=96.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..|..+.++++|++|+|++|.+++..+..|.++++|+.|+|++|++++..|..+..+++|++|+|
T Consensus 56 ~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l 135 (477)
T 2id5_A 56 PHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEV 135 (477)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEE
T ss_pred CCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEEC
Confidence 46888888888888877888888888888888888888655556788888888888888888777777888888888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCC-CCCCCcccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 196 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 196 (447)
++|.+++..|..+..+++|+.|++++|.+++..+. ...+..+..+.+.+|
T Consensus 136 ~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 186 (477)
T 2id5_A 136 GDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHL 186 (477)
T ss_dssp CCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESC
T ss_pred CCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCC
Confidence 88888777777777777788888888877754332 122334444444443
No 341
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.40 E-value=1.3e-13 Score=132.01 Aligned_cols=108 Identities=21% Similarity=0.277 Sum_probs=57.5
Q ss_pred EEEEEcCCCCc-ccccccccc-------CCCCCCEEECCCCccCCCCChhh--cCCCCCcEEEccCCcccccCCccccCC
Q 013258 69 VTRVDLGNAAL-SGELAPELG-------QLKNLELLELYGNNLSGHIPSAL--GNLIKLKSLDLYSNLFNGTIPDTLANL 138 (447)
Q Consensus 69 v~~l~L~~~~l-~g~~~~~l~-------~l~~L~~L~L~~N~l~~~~p~~~--~~l~~L~~L~ls~N~l~g~~p~~~~~l 138 (447)
++.|+|++|.+ .+.+|..+. ++++|++|+|++|.+++.+|..+ ..+++|++|+|++|++++. |..++.+
T Consensus 65 L~~L~L~~n~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l 143 (312)
T 1wwl_A 65 IKSLSLKRLTVRAARIPSRILFGALRVLGISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAEL 143 (312)
T ss_dssp HHHCCCCEEEEEEEECBHHHHHHHHHHHTTSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHH
T ss_pred HhhcccccccccCCCcCHHHHHHHHHhcCcCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHH
Confidence 44555555555 234444443 45555555555555555555544 5555555555555555543 5444444
Q ss_pred -----CCCCeeeCcCccccccCchHHhhcccccccccccccccc
Q 013258 139 -----KQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 139 -----~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
++|++|+|++|++++..|..++.+++|+.|++++|++.|
T Consensus 144 ~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~ 187 (312)
T 1wwl_A 144 QQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELG 187 (312)
T ss_dssp HTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCH
T ss_pred HHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCc
Confidence 555555555555555555555555555555555555544
No 342
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.39 E-value=8.9e-13 Score=132.27 Aligned_cols=130 Identities=22% Similarity=0.264 Sum_probs=105.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..+..+..+++|++|+|++|++++..+..|..+++|+.|+|++|+++...+..+.++++|++|+|
T Consensus 88 ~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l 167 (440)
T 3zyj_A 88 RHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDL 167 (440)
T ss_dssp SSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCC
Confidence 47899999999999888888999999999999999999766678999999999999999998766667888888999999
Q ss_pred cCcc-ccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNS-LSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~-l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|+ +....+..+..+++|+.|++++|.++ .+|....+..+..+++.+|.
T Consensus 168 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~l~~L~~L~Ls~N~ 218 (440)
T 3zyj_A 168 GELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPNLTPLIKLDELDLSGNH 218 (440)
T ss_dssp CCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCCCTTCSSCCEEECTTSC
T ss_pred CCCCCcceeCcchhhcccccCeecCCCCcCc-cccccCCCcccCEEECCCCc
Confidence 8854 44444446788888888888888887 45665556666666666663
No 343
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.39 E-value=2e-13 Score=140.57 Aligned_cols=132 Identities=25% Similarity=0.392 Sum_probs=94.0
Q ss_pred CCCCCCCCCCC-----cccee-EeCCCCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcE
Q 013258 46 QSWDNLPGNLC-----TWFHI-TCNPEGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKS 119 (447)
Q Consensus 46 ~~w~~~~~~~c-----~w~gv-~c~~~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 119 (447)
.+|.. ...+| .|.|+ .|. .++++.|+|++|.+++ +|+.+. ++|++|+|++|.|+ .+| ..+++|+.
T Consensus 34 ~~W~~-~~~~~~~~~~~~~~l~~C~-~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip---~~l~~L~~ 104 (571)
T 3cvr_A 34 DKWEK-QALPGENRNEAVSLLKECL-INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP---ELPASLEY 104 (571)
T ss_dssp HHHHT-TCCTTCCHHHHHHHHHHHH-HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---CCCTTCCE
T ss_pred HHHhc-cCCccccccchhhhccccc-cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---cccCCCCE
Confidence 35754 45778 79999 686 3478999999999987 777663 77888888888888 577 45678888
Q ss_pred EEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 120 LDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 120 L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
|+|++|++++ +|. +.+ +|++|+|++|++++ +|. .+++|+.|++++|.+++ +|. .+..+..+.+++|.
T Consensus 105 L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~--~l~~L~~L~Ls~N~ 171 (571)
T 3cvr_A 105 LDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE--LPTSLEVLSVRNNQ 171 (571)
T ss_dssp EECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC--CCTTCCEEECCSSC
T ss_pred EEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC--cCCCcCEEECCCCC
Confidence 8888888875 676 554 77778888777776 554 46677777777777776 444 34455555555553
No 344
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.39 E-value=7.9e-13 Score=133.12 Aligned_cols=130 Identities=19% Similarity=0.234 Sum_probs=104.3
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+..+..+++|++|+|++|.+++..+..|.++++|+.|+|++|++++..+..+.++++|+.|++
T Consensus 99 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l 178 (452)
T 3zyi_A 99 HHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDL 178 (452)
T ss_dssp TTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCcChhhccCcccCCEEECCCCcCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeC
Confidence 46899999999999988889999999999999999999777777999999999999999999666667888888888888
Q ss_pred cCc-cccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNN-SLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N-~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++| .+....+..+..+++|+.|++++|++++ +|....+..+..+++.+|.
T Consensus 179 ~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~ 229 (452)
T 3zyi_A 179 GELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MPNLTPLVGLEELEMSGNH 229 (452)
T ss_dssp CCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CCCCTTCTTCCEEECTTSC
T ss_pred CCCCCccccChhhccCCCCCCEEECCCCcccc-cccccccccccEEECcCCc
Confidence 884 4444444467778888888888888875 3555555566666555553
No 345
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.39 E-value=3.1e-13 Score=138.49 Aligned_cols=127 Identities=19% Similarity=0.231 Sum_probs=82.2
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccc--cCCccccCCCCCCeee
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNG--TIPDTLANLKQLKYLR 145 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~ 145 (447)
+++.|++++|.+.+... ...+++|++|++++|.+++.+|..++++++|+.|++++|++++ .+|..++.+++|++|+
T Consensus 303 ~L~~L~l~~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~ 380 (520)
T 2z7x_B 303 NIKNFTVSGTRMVHMLC--PSKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLD 380 (520)
T ss_dssp CCSEEEEESSCCCCCCC--CSSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEE
T ss_pred ceeEEEcCCCccccccc--hhhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEE
Confidence 46677777776654321 1466777777777777777677777777777777777777765 4556677777777777
Q ss_pred CcCccccccCch-HHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 146 LNNNSLSGLIPT-SLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 146 l~~N~l~~~~p~-~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
+++|++++.+|. .+..+++|+.|++++|.+++.+|.... ..+..+++++|.
T Consensus 381 Ls~N~l~~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~ 432 (520)
T 2z7x_B 381 ISQNSVSYDEKKGDCSWTKSLLSLNMSSNILTDTIFRCLP-PRIKVLDLHSNK 432 (520)
T ss_dssp CCSSCCBCCGGGCSCCCCTTCCEEECCSSCCCGGGGGSCC-TTCCEEECCSSC
T ss_pred CCCCcCCcccccchhccCccCCEEECcCCCCCcchhhhhc-ccCCEEECCCCc
Confidence 777777764454 356666777777777777766554321 345555555553
No 346
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.39 E-value=2.6e-13 Score=137.88 Aligned_cols=30 Identities=20% Similarity=0.022 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHhcCCCCCccceeeEEecCC
Q 013258 336 ELQFQTEVKIISMAVHRNLLRLYGFCTTVT 365 (447)
Q Consensus 336 ~~~~~~E~~~l~~l~H~niv~l~~~~~~~~ 365 (447)
..+|..|++.+++++|+|+|+++|||.+..
T Consensus 323 ~~eF~~Eve~L~~i~HrNLV~L~gyC~s~~ 352 (487)
T 3oja_A 323 SETERLECERENQARQREIDALKEQYRTVI 352 (487)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHHhcccccchhhHHHHhcChH
Confidence 457999999999999999999999998764
No 347
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.39 E-value=4.2e-13 Score=130.59 Aligned_cols=129 Identities=21% Similarity=0.282 Sum_probs=110.6
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCc--cccCCCCCCee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD--TLANLKQLKYL 144 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L 144 (447)
.+++.|+|++|.+++..+..+.++++|++|+|++|.+++..+..+.++++|++|++++|+++ .+|. .+.++++|++|
T Consensus 76 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~~~~l~~L~~L 154 (353)
T 2z80_A 76 VNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYK-TLGETSLFSHLTKLQIL 154 (353)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCS-SSCSSCSCTTCTTCCEE
T ss_pred CCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCc-ccCchhhhccCCCCcEE
Confidence 57999999999999988888999999999999999999755555999999999999999998 4665 78999999999
Q ss_pred eCcCc-cccccCchHHhhcccccccccccccccccCCCC-CCCCcccccccccc
Q 013258 145 RLNNN-SLSGLIPTSLTTITSLNILDLSNNRLSGPVPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 145 ~l~~N-~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~-~~~~~~~~~~~~~n 196 (447)
++++| .+.+..|..+..+++|+.|++++|.+++..|.. ..+..+..+.+.+|
T Consensus 155 ~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n 208 (353)
T 2z80_A 155 RVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMK 208 (353)
T ss_dssp EEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECS
T ss_pred ECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCC
Confidence 99999 477777888999999999999999999987754 34455666666555
No 348
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.39 E-value=2.8e-13 Score=124.28 Aligned_cols=129 Identities=18% Similarity=0.232 Sum_probs=107.6
Q ss_pred CCEEEEEcCCCC-ccccccccccCCCCCCEEECCC-CccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCC--
Q 013258 67 GSVTRVDLGNAA-LSGELAPELGQLKNLELLELYG-NNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLK-- 142 (447)
Q Consensus 67 ~~v~~l~L~~~~-l~g~~~~~l~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~-- 142 (447)
.+++.|+|++|. +++..+..+..+++|++|++++ |.+++..+..|.++++|+.|++++|++++ +|+ +..+++|+
T Consensus 55 ~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~l~~L~~L 132 (239)
T 2xwt_C 55 PNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTKVYSTDIF 132 (239)
T ss_dssp TTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTTCCBCCSE
T ss_pred CCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-cccccccccc
Confidence 479999999997 7766666899999999999998 99997777789999999999999999986 787 88888888
Q ss_pred -eeeCcCc-cccccCchHHhhccccc-ccccccccccccCCCCCCCCccccccccccc
Q 013258 143 -YLRLNNN-SLSGLIPTSLTTITSLN-ILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 143 -~L~l~~N-~l~~~~p~~~~~l~~L~-~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
+|++++| .+++..+..+..+++|+ .|++++|.++...+.......+..+.+.+|.
T Consensus 133 ~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~ 190 (239)
T 2xwt_C 133 FILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNK 190 (239)
T ss_dssp EEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCT
T ss_pred cEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCC
Confidence 9999999 99887777899999999 9999999998433333333456666676663
No 349
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.39 E-value=7e-13 Score=137.26 Aligned_cols=131 Identities=24% Similarity=0.295 Sum_probs=105.5
Q ss_pred CCCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCC--CCChhhcCCCCCcEEEccCCcccccCCcc-ccCCCCCC
Q 013258 66 EGSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDT-LANLKQLK 142 (447)
Q Consensus 66 ~~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~-~~~l~~L~ 142 (447)
..+++.|+|++|.+++.+|..+..+++|+.|+|++|.+++ .+|..+.++++|+.|++++|++++.+|.. +..+++|+
T Consensus 352 l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~L~ 431 (562)
T 3a79_B 352 PSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAESIL 431 (562)
T ss_dssp CCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTTCC
T ss_pred CCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCcccCC
Confidence 3578999999999999899999999999999999999996 34567889999999999999999766654 77888899
Q ss_pred eeeCcCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccc
Q 013258 143 YLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLN 198 (447)
Q Consensus 143 ~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 198 (447)
+|++++|++++.+|..+. ++|+.|++++|+++...+....+..+..+.+.+|..
T Consensus 432 ~L~l~~n~l~~~~~~~l~--~~L~~L~L~~N~l~~ip~~~~~l~~L~~L~L~~N~l 485 (562)
T 3a79_B 432 VLNLSSNMLTGSVFRCLP--PKVKVLDLHNNRIMSIPKDVTHLQALQELNVASNQL 485 (562)
T ss_dssp EEECCSSCCCGGGGSSCC--TTCSEEECCSSCCCCCCTTTTSSCCCSEEECCSSCC
T ss_pred EEECCCCCCCcchhhhhc--CcCCEEECCCCcCcccChhhcCCCCCCEEECCCCCC
Confidence 999999998877776553 578888888888884333444566677777777653
No 350
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.37 E-value=4.8e-13 Score=137.87 Aligned_cols=116 Identities=26% Similarity=0.300 Sum_probs=105.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccc-cCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNG-TIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g-~~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.+++..|..+..+++|++|+|++|.+++..|..|+++++|++|++++|.+++ .+|..++++++|++|+
T Consensus 50 ~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~ 129 (549)
T 2z81_A 50 ANLQVLILKSSRINTIEGDAFYSLGSLEHLDLSDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLR 129 (549)
T ss_dssp TTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEE
T ss_pred CcccEEECCCCCcCccChhhccccccCCEEECCCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEE
Confidence 579999999999999888999999999999999999998777789999999999999999986 4678899999999999
Q ss_pred CcCccccccCc-hHHhhcccccccccccccccccCCCC
Q 013258 146 LNNNSLSGLIP-TSLTTITSLNILDLSNNRLSGPVPDN 182 (447)
Q Consensus 146 l~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~g~~p~~ 182 (447)
+++|++.+.+| ..+..+++|+.|++++|.+++.+|..
T Consensus 130 L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 167 (549)
T 2z81_A 130 IGNVETFSEIRRIDFAGLTSLNELEIKALSLRNYQSQS 167 (549)
T ss_dssp EEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTT
T ss_pred CCCCccccccCHhhhhcccccCeeeccCCcccccChhh
Confidence 99999555555 68999999999999999999987754
No 351
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.37 E-value=7.7e-13 Score=115.45 Aligned_cols=106 Identities=21% Similarity=0.275 Sum_probs=94.3
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCc--cccCCCCCCeee
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD--TLANLKQLKYLR 145 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~--~~~~l~~L~~L~ 145 (447)
+++.|+|++|.+++. +.+..+++|++|+|++|.+++..|..+..+++|+.|++++|+++ .+|. .+..+++|+.|+
T Consensus 43 ~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-~~~~~~~l~~l~~L~~L~ 119 (176)
T 1a9n_A 43 QFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTELILTNNSLV-ELGDLDPLASLKSLTYLC 119 (176)
T ss_dssp CCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEEECCSCCCC-CGGGGGGGGGCTTCCEEE
T ss_pred CCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEEECCCCcCC-cchhhHhhhcCCCCCEEE
Confidence 799999999999975 68999999999999999999655555699999999999999996 6777 889999999999
Q ss_pred CcCccccccCchH----Hhhcccccccccccccccc
Q 013258 146 LNNNSLSGLIPTS----LTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 146 l~~N~l~~~~p~~----~~~l~~L~~l~ls~N~l~g 177 (447)
+++|.++. +|.. +..+++|+.||+++|.+..
T Consensus 120 l~~N~i~~-~~~~~~~~~~~l~~L~~Ld~~~n~~~~ 154 (176)
T 1a9n_A 120 ILRNPVTN-KKHYRLYVIYKVPQVRVLDFQKVKLKE 154 (176)
T ss_dssp CCSSGGGG-STTHHHHHHHHCTTCSEETTEECCHHH
T ss_pred ecCCCCCC-cHhHHHHHHHHCCccceeCCCcCCHHH
Confidence 99999985 5664 8999999999999998864
No 352
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.36 E-value=1.4e-12 Score=113.61 Aligned_cols=106 Identities=24% Similarity=0.302 Sum_probs=92.1
Q ss_pred CCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccccccccc
Q 013258 93 LELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 172 (447)
Q Consensus 93 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~ 172 (447)
-+.+++++|.++ .+|..+. ++|+.|+|++|++++..|..|.++++|++|+|++|++++..+..|..+++|+.|++++
T Consensus 14 ~~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~ 90 (174)
T 2r9u_A 14 QTLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLND 90 (174)
T ss_dssp SSEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CcEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCC
Confidence 378999999997 6887775 8999999999999988899999999999999999999987777789999999999999
Q ss_pred ccccccCCC-CCCCCccccccccccccccC
Q 013258 173 NRLSGPVPD-NGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 173 N~l~g~~p~-~~~~~~~~~~~~~~n~~lc~ 201 (447)
|+|++..+. ...+..+..+.+.+|+..|.
T Consensus 91 N~l~~l~~~~~~~l~~L~~L~L~~N~~~c~ 120 (174)
T 2r9u_A 91 NHLKSIPRGAFDNLKSLTHIYLYNNPWDCE 120 (174)
T ss_dssp SCCCCCCTTTTTTCTTCSEEECCSSCBCTT
T ss_pred CccceeCHHHhccccCCCEEEeCCCCcccc
Confidence 999987665 44567788888888876553
No 353
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.36 E-value=4.9e-13 Score=141.52 Aligned_cols=110 Identities=30% Similarity=0.387 Sum_probs=57.6
Q ss_pred CEEEEEcCCCCcc--ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccC----C----ccccC
Q 013258 68 SVTRVDLGNAALS--GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTI----P----DTLAN 137 (447)
Q Consensus 68 ~v~~l~L~~~~l~--g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~----p----~~~~~ 137 (447)
.++.|+|++|.+. +.+|..+..+++|+.|+|++|.+++..|..+.++++|+.|++++|++++.. | ..+.+
T Consensus 455 ~L~~L~l~~n~l~~~~~~p~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~ 534 (680)
T 1ziw_A 455 SLQRLMLRRVALKNVDSSPSPFQPLRNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKG 534 (680)
T ss_dssp TCCEEECTTSCCBCTTCSSCTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTT
T ss_pred ccccchhccccccccccCCcccccCCCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcC
Confidence 4555666665554 345555556666666666666665544445555555555555555554321 1 12444
Q ss_pred CCCCCeeeCcCccccccCchHHhhcccccccccccccccc
Q 013258 138 LKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 138 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
+++|+.|+|++|+++...+..|..+++|+.|++++|++++
T Consensus 535 l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 574 (680)
T 1ziw_A 535 LSHLHILNLESNGFDEIPVEVFKDLFELKIIDLGLNNLNT 574 (680)
T ss_dssp CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred CCCCCEEECCCCCCCCCCHHHcccccCcceeECCCCCCCc
Confidence 5555555555555553333344555555555555555554
No 354
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.36 E-value=2.2e-13 Score=130.12 Aligned_cols=131 Identities=17% Similarity=0.110 Sum_probs=94.9
Q ss_pred CCEEEEEcCCCCcccccc----ccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccccc--CC--ccccCC
Q 013258 67 GSVTRVDLGNAALSGELA----PELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGT--IP--DTLANL 138 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~----~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~--~p--~~~~~l 138 (447)
.+++.|+|++|.+++..+ ..+..+++|++|+|++|.+++..|..++.+++|++|+|++|++.+. ++ ..++.+
T Consensus 117 ~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l 196 (310)
T 4glp_A 117 LALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKF 196 (310)
T ss_dssp BCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSS
T ss_pred CCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcC
Confidence 457888888888887554 3445788888888888888877778888888888888888887642 22 234678
Q ss_pred CCCCeeeCcCccccccCch----HHhhcccccccccccccccccCCCC-CCC---Ccccccccccccc
Q 013258 139 KQLKYLRLNNNSLSGLIPT----SLTTITSLNILDLSNNRLSGPVPDN-GSF---SQFTPISFENNLN 198 (447)
Q Consensus 139 ~~L~~L~l~~N~l~~~~p~----~~~~l~~L~~l~ls~N~l~g~~p~~-~~~---~~~~~~~~~~n~~ 198 (447)
++|++|+|++|+++. +|. .+..+++|+.||+++|.+++..|.. ..+ ..+..+.+++|..
T Consensus 197 ~~L~~L~Ls~N~l~~-l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l 263 (310)
T 4glp_A 197 PAIQNLALRNTGMET-PTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGL 263 (310)
T ss_dssp CCCCSCBCCSSCCCC-HHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCC
T ss_pred CCCCEEECCCCCCCc-hHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCC
Confidence 888888888888863 233 2467788888888888888875533 333 4666666666643
No 355
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.35 E-value=2.2e-12 Score=122.02 Aligned_cols=122 Identities=34% Similarity=0.454 Sum_probs=87.4
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+ +..+++|++|+|++|.+++ +| .+..+++|+.|++++|++++ + +.+..+++|+.|++
T Consensus 68 ~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~n~i~~-~-~~l~~l~~L~~L~l 141 (291)
T 1h6t_A 68 PNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYL 141 (291)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTTSCCCC-C-GGGGGCTTCCEEEC
T ss_pred CCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCCCcCCC-C-hhhcCCCCCCEEEc
Confidence 467888888888876444 7788888888888888875 33 47778888888888888774 3 45777778888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++. ..+..+++|+.|++++|.+++..| ...+..+..+.+.+|.
T Consensus 142 ~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~L~~N~ 189 (291)
T 1h6t_A 142 GNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP-LAGLTKLQNLYLSKNH 189 (291)
T ss_dssp CSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred cCCcCCcc--hhhccCCCCCEEEccCCccccchh-hcCCCccCEEECCCCc
Confidence 88887764 467777778888888887776554 4445556666665553
No 356
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.34 E-value=2.4e-12 Score=121.77 Aligned_cols=101 Identities=31% Similarity=0.429 Sum_probs=49.3
Q ss_pred EEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcC
Q 013258 69 VTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNN 148 (447)
Q Consensus 69 v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~ 148 (447)
++.|++++|.+.+. +.+..+++|++|+|++|.+++..| +.++++|+.|++++|.+++ +| .+..+++|++|++++
T Consensus 48 L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~L~~ 121 (291)
T 1h6t_A 48 IDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLSLEH 121 (291)
T ss_dssp CCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEECTT
T ss_pred ccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEECCC
Confidence 44555555554432 224455555555555555553222 5555555555555555543 22 245555555555555
Q ss_pred ccccccCchHHhhcccccccccccccccc
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
|++++. ..+..+++|+.|++++|.+++
T Consensus 122 n~i~~~--~~l~~l~~L~~L~l~~n~l~~ 148 (291)
T 1h6t_A 122 NGISDI--NGLVHLPQLESLYLGNNKITD 148 (291)
T ss_dssp SCCCCC--GGGGGCTTCCEEECCSSCCCC
T ss_pred CcCCCC--hhhcCCCCCCEEEccCCcCCc
Confidence 555432 234455555555555555544
No 357
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.34 E-value=5e-13 Score=127.64 Aligned_cols=128 Identities=20% Similarity=0.194 Sum_probs=103.0
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCC--C--ChhhcCCCCCcEEEccCCcccccCCc----cccCC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGH--I--PSALGNLIKLKSLDLYSNLFNGTIPD----TLANL 138 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~--~--p~~~~~l~~L~~L~ls~N~l~g~~p~----~~~~l 138 (447)
.+++.|+|++|.+.+..+..+..+++|++|+|++|++.+. + +..++.+++|++|+|++|+++ .+|. .++++
T Consensus 145 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l 223 (310)
T 4glp_A 145 PGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGME-TPTGVCAALAAAG 223 (310)
T ss_dssp SCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCC-CHHHHHHHHHHHT
T ss_pred cCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCC-chHHHHHHHHhcC
Confidence 4789999999999988888999999999999999998752 2 223468899999999999997 3343 25678
Q ss_pred CCCCeeeCcCccccccCchHHhhc---ccccccccccccccccCCCCCCCCccccccccccc
Q 013258 139 KQLKYLRLNNNSLSGLIPTSLTTI---TSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 139 ~~L~~L~l~~N~l~~~~p~~~~~l---~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++|+|++|++++..|..+..+ ++|+.|++++|+++ .+|... +..+..+++++|.
T Consensus 224 ~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~-~~~L~~L~Ls~N~ 283 (310)
T 4glp_A 224 VQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGL-PAKLRVLDLSSNR 283 (310)
T ss_dssp CCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCC-CSCCSCEECCSCC
T ss_pred CCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhh-cCCCCEEECCCCc
Confidence 999999999999998878777776 58999999999998 566543 3677777777775
No 358
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.34 E-value=3.3e-12 Score=122.93 Aligned_cols=128 Identities=21% Similarity=0.273 Sum_probs=88.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccC--CCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLS--GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYL 144 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~--~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L 144 (447)
..++.|+|++|.+.+..+..+..+++|+.|++++|.++ +..+..+.++++|+.|++++|.++ .+|..+. ++|++|
T Consensus 121 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~-~l~~~~~--~~L~~L 197 (330)
T 1xku_A 121 KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT-TIPQGLP--PSLTEL 197 (330)
T ss_dssp TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-SCCSSCC--TTCSEE
T ss_pred ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-cCCcccc--ccCCEE
Confidence 46888888888888777777888888888888888885 366777788888888777777776 3555443 566777
Q ss_pred eCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccccccc
Q 013258 145 RLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENNL 197 (447)
Q Consensus 145 ~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n~ 197 (447)
++++|++++..|..+..+++|+.|++++|.+++..+. ...+..+..+.+.+|.
T Consensus 198 ~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 198 HLDGNKITKVDAASLKGLNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp ECTTSCCCEECTGGGTTCTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred ECCCCcCCccCHHHhcCCCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 7777777666666666666677777777766665542 2234445555555553
No 359
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.34 E-value=3.7e-12 Score=118.69 Aligned_cols=124 Identities=23% Similarity=0.296 Sum_probs=96.3
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+ +..+++|+.|+|++|++++ +|.. .. ++|+.|++++|++++ +| .+..+++|+.|+|
T Consensus 63 ~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~L 135 (263)
T 1xeu_A 63 TNLKELHLSHNQISDLSP--LKDLTKLEELSVNRNRLKN-LNGI-PS-ACLSRLFLDNNELRD-TD-SLIHLKNLEILSI 135 (263)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCSSCCEEECCSSCCSC-CTTC-CC-SSCCEEECCSSCCSB-SG-GGTTCTTCCEEEC
T ss_pred CCCCEEECCCCccCCChh--hccCCCCCEEECCCCccCC-cCcc-cc-CcccEEEccCCccCC-Ch-hhcCcccccEEEC
Confidence 468888898888886544 8888889999999998885 4443 23 888899999998885 34 5888899999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLNLC 200 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~lc 200 (447)
++|++++. | .+..+++|+.|++++|++++. +....+..+..+.+.+|...+
T Consensus 136 s~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 136 RNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp TTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC-TTSTTCCCCCEEEEEEEEEEC
T ss_pred CCCcCCCC-h-HHccCCCCCEEECCCCcCcch-HHhccCCCCCEEeCCCCcccC
Confidence 99999864 4 688888999999999999876 445556677777777776443
No 360
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.33 E-value=1.6e-14 Score=128.82 Aligned_cols=125 Identities=24% Similarity=0.357 Sum_probs=85.3
Q ss_pred CEEEEEcCCCCccccccc------cccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCC
Q 013258 68 SVTRVDLGNAALSGELAP------ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQL 141 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~------~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L 141 (447)
.++.++|+.+.+.|.+|+ .+..+++|++|+|++|.+++ +| .+.++++|+.|++++|+++ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 445555666666666555 77777778888888777775 66 7777778888888888777 567766667777
Q ss_pred CeeeCcCccccccCchHHhhcccccccccccccccccC--CCCCCCCccccccccccc
Q 013258 142 KYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPV--PDNGSFSQFTPISFENNL 197 (447)
Q Consensus 142 ~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~--p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++|++++ +| .+..+++|+.|++++|++++.. +....+..+..+.+.+|+
T Consensus 96 ~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~ 151 (198)
T 1ds9_A 96 EELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNP 151 (198)
T ss_dssp SEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCH
T ss_pred CEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCc
Confidence 888888887775 34 5777777788888887776422 122344555556666554
No 361
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.33 E-value=2.9e-12 Score=124.08 Aligned_cols=124 Identities=33% Similarity=0.427 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++..+ +..+++|++|++++|.+++ + +.+..+++|+.|++++|++++ + +.+..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~l~~n~l~~-~-~~~~~l~~L~~L~L 294 (347)
T 4fmz_A 221 TRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISD-I-NAVKDLTKLKMLNVGSNQISD-I-SVLNNLSQLNSLFL 294 (347)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-C-GGGTTCTTCCEEECCSSCCCC-C-GGGGGCTTCSEEEC
T ss_pred CcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCC-C-hhHhcCCCcCEEEccCCccCC-C-hhhcCCCCCCEEEC
Confidence 356777777777765433 7777788888888887775 3 457777888888888888774 3 45777788888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..|..+..+++|+.|++++|++++..| ...+..+..+++.+|.
T Consensus 295 ~~n~l~~~~~~~l~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 295 NNNQLGNEDMEVIGGLTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp CSSCCCGGGHHHHHTCTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred cCCcCCCcChhHhhccccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 8888887777778888888888888888877666 4445666666666654
No 362
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.32 E-value=5.7e-12 Score=117.15 Aligned_cols=142 Identities=12% Similarity=0.033 Sum_probs=109.3
Q ss_pred HHhcCCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEE
Q 013258 292 VATDGFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 292 ~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv 370 (447)
...++|.....++.|+.+.||+.... ++.+++|..+.... .....+.+|+++++.+. |..+.++++++...+..++|
T Consensus 11 ~~l~~~~~~~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~-~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv 88 (263)
T 3tm0_A 11 KLIEKYRCVKDTEGMSPAKVYKLVGE-NENLYLKMTDSRYK-GTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLL 88 (263)
T ss_dssp HHHTTSEEEECCSCCSSSEEEEEECS-SCEEEEEEECGGGT-TSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEE
T ss_pred HHhccceeEeeccCCCCCeEEEEECC-CCcEEEEeCCcccC-CCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEE
Confidence 34467877778888888999999854 68899999865321 12235889999998884 67788999999888889999
Q ss_pred eecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC-----------------------------------
Q 013258 371 YPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH----------------------------------- 415 (447)
Q Consensus 371 ~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------- 415 (447)
|||++|.+|.+.+.. ......++.+++++|+.||+.
T Consensus 89 ~e~i~G~~l~~~~~~---------~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (263)
T 3tm0_A 89 MSEADGVLCSEEYED---------EQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWE 159 (263)
T ss_dssp EECCSSEEHHHHCCT---------TTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGS
T ss_pred EEecCCeehhhccCC---------cccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhcccccccccccc
Confidence 999999998776321 122347888999999999981
Q ss_pred ---------------------CCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 416 ---------------------CDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 416 ---------------------~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..+.++|+|++|.|||++++....|.||.
T Consensus 160 ~~~~~~~~~~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe 209 (263)
T 3tm0_A 160 EDTPFKDPRELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLG 209 (263)
T ss_dssp TTCSSSSHHHHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCT
T ss_pred ccccCCCHHHHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEch
Confidence 01358999999999999876666799985
No 363
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.31 E-value=9.2e-13 Score=126.24 Aligned_cols=119 Identities=18% Similarity=0.143 Sum_probs=59.0
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|.+++..+ +..+++|++|+|++|.+++. | ..++|+.|++++|++++..+. .+++|++|+++
T Consensus 59 ~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~l~ 128 (317)
T 3o53_A 59 KLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLHAANNNISRVSCS---RGQGKKNIYLA 128 (317)
T ss_dssp TCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEECC
T ss_pred cCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEEECCCCccCCcCcc---ccCCCCEEECC
Confidence 46666666666665443 56666666666666665531 1 113333333333333322111 23455555666
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCC--CCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNG--SFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~--~~~~~~~~~~~~n 196 (447)
+|++++..|..+..+++|+.|++++|.+++..|... .+..+..+.+.+|
T Consensus 129 ~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N 179 (317)
T 3o53_A 129 NNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYN 179 (317)
T ss_dssp SSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTS
T ss_pred CCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCC
Confidence 666655555555555666666666666655433321 2334444444444
No 364
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.31 E-value=2.9e-12 Score=123.50 Aligned_cols=126 Identities=18% Similarity=0.303 Sum_probs=62.4
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccc--ccCCccccCC-------
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN--GTIPDTLANL------- 138 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~--g~~p~~~~~l------- 138 (447)
+++.|+|++|.+. .+|+.+. ++|++|++++|.+++..+..+.++++|+.|++++|.++ +..|..+..+
T Consensus 103 ~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l 179 (332)
T 2ft3_A 103 KLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRI 179 (332)
T ss_dssp TCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBC
T ss_pred CCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEEC
Confidence 4555555555554 3343332 44455555555444433333444444444444444442 1222222211
Q ss_pred -------------CCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCcccccccccc
Q 013258 139 -------------KQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISFENN 196 (447)
Q Consensus 139 -------------~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~~~n 196 (447)
++|++|++++|.+++..|..+..+++|+.|++++|.+++..|. ...+..+..+.+.+|
T Consensus 180 ~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 251 (332)
T 2ft3_A 180 SEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSFLPTLRELHLDNN 251 (332)
T ss_dssp CSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGGCTTCCEEECCSS
T ss_pred cCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhCCCCCCEEECCCC
Confidence 3566666666666665556666666666666666666655442 223344444455444
No 365
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.31 E-value=4.1e-12 Score=121.19 Aligned_cols=122 Identities=25% Similarity=0.450 Sum_probs=87.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+. +.+..+++|++|+|++|.+++ +|. +..+++|+.|++++|++++. |. +..+++|+.|++
T Consensus 85 ~~L~~L~L~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l 158 (308)
T 1h6u_A 85 TKITELELSGNPLKNV--SAIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYLDLNQITNI-SP-LAGLTNLQYLSI 158 (308)
T ss_dssp CSCCEEECCSCCCSCC--GGGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCC-GG-GGGCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCc--hhhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEECCCCccCcC-cc-ccCCCCccEEEc
Confidence 4688888888888763 367888888888888888875 443 77888888888888888753 33 777788888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..+ +..+++|+.|++++|.+++..+ ...+..+..+.+.+|.
T Consensus 159 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~L~~N~ 206 (308)
T 1h6u_A 159 GNAQVSDLTP--LANLSKLTTLKADDNKISDISP-LASLPNLIEVHLKNNQ 206 (308)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGG-GGGCTTCCEEECTTSC
T ss_pred cCCcCCCChh--hcCCCCCCEEECCCCccCcChh-hcCCCCCCEEEccCCc
Confidence 8888876433 7777778888888887776443 3344555555565554
No 366
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.30 E-value=6e-12 Score=120.06 Aligned_cols=122 Identities=28% Similarity=0.463 Sum_probs=97.0
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..+ +..+++|++|+|++|.+++ +| .+..+++|+.|++++|++++ +|. +..+++|++|++
T Consensus 63 ~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~~L~l 136 (308)
T 1h6u_A 63 NNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQVLYL 136 (308)
T ss_dssp TTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCCEEEC
T ss_pred CCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCCEEEC
Confidence 468899999998886444 8889999999999999885 34 68889999999999999985 444 888999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..+ +..+++|+.|++++|.+++..+ ...+..+..+.+.+|.
T Consensus 137 ~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~-l~~l~~L~~L~l~~n~ 184 (308)
T 1h6u_A 137 DLNQITNISP--LAGLTNLQYLSIGNAQVSDLTP-LANLSKLTTLKADDNK 184 (308)
T ss_dssp CSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred CCCccCcCcc--ccCCCCccEEEccCCcCCCChh-hcCCCCCCEEECCCCc
Confidence 9999986544 8888899999999999887544 4455666666666664
No 367
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.29 E-value=6.3e-12 Score=130.68 Aligned_cols=103 Identities=37% Similarity=0.473 Sum_probs=49.9
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|.+.+..+ +..|++|+.|+|++|.+++ +| .+..+++|+.|+|++|++++ + +.+..+++|+.|+|+
T Consensus 66 ~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls 139 (605)
T 1m9s_A 66 NVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLG 139 (605)
T ss_dssp TCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECC
T ss_pred CCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECC
Confidence 45566666666554333 5555555555555555553 22 34455555555555555543 2 234444444444444
Q ss_pred CccccccCchHHhhccccccccccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGP 178 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~ 178 (447)
+|.+++. ..+..+++|+.|+|++|.+++.
T Consensus 140 ~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~ 168 (605)
T 1m9s_A 140 NNKITDI--TVLSRLTKLDTLSLEDNQISDI 168 (605)
T ss_dssp SSCCCCC--GGGGSCTTCSEEECCSSCCCCC
T ss_pred CCccCCc--hhhcccCCCCEEECcCCcCCCc
Confidence 4444432 3344444444444444444443
No 368
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.28 E-value=7.2e-12 Score=130.27 Aligned_cols=123 Identities=27% Similarity=0.339 Sum_probs=107.5
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+ ++.+..|++|+.|+|++|.+++ + +.+..+++|+.|+|++|++++. +.+..+++|+.|+|
T Consensus 87 ~~L~~L~Ls~N~l~~--l~~l~~l~~L~~L~Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~L 160 (605)
T 1m9s_A 87 KNLGWLFLDENKIKD--LSSLKDLKKLKSLSLEHNGISD-I-NGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSL 160 (605)
T ss_dssp TTCCEEECCSSCCCC--CTTSTTCTTCCEEECTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEEC
T ss_pred CCCCEEECcCCCCCC--ChhhccCCCCCEEEecCCCCCC-C-ccccCCCccCEEECCCCccCCc--hhhcccCCCCEEEC
Confidence 479999999999986 3479999999999999999996 3 4689999999999999999964 67899999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNLN 198 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~~ 198 (447)
++|++++..| +..+++|+.|+|++|.|++. |....+..+..+.+.+|..
T Consensus 161 s~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 161 EDNQISDIVP--LAGLTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp CSSCCCCCGG--GTTCTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred cCCcCCCchh--hccCCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 9999998766 89999999999999999974 6666677788888877754
No 369
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.27 E-value=6.6e-12 Score=121.74 Aligned_cols=106 Identities=18% Similarity=0.152 Sum_probs=91.9
Q ss_pred CEEECCCC-ccCCCCChhhcCCCCCcEEEccC-CcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccc
Q 013258 94 ELLELYGN-NLSGHIPSALGNLIKLKSLDLYS-NLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 171 (447)
Q Consensus 94 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~ls~-N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls 171 (447)
..++++++ +|++ +|. +..+++|+.|+|++ |+|++..|..|+++++|+.|+|++|+|++.+|..|..+++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788888 8984 888 99999999999996 99998877899999999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCccccccccccccccC
Q 013258 172 NNRLSGPVPDNGSFSQFTPISFENNLNLCG 201 (447)
Q Consensus 172 ~N~l~g~~p~~~~~~~~~~~~~~~n~~lc~ 201 (447)
+|+|++.++.......+..+.+.+|...|.
T Consensus 89 ~N~l~~~~~~~~~~~~L~~l~l~~N~~~c~ 118 (347)
T 2ifg_A 89 FNALESLSWKTVQGLSLQELVLSGNPLHCS 118 (347)
T ss_dssp SSCCSCCCSTTTCSCCCCEEECCSSCCCCC
T ss_pred CCccceeCHHHcccCCceEEEeeCCCccCC
Confidence 999998776654433477777888877664
No 370
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.26 E-value=1e-11 Score=128.27 Aligned_cols=101 Identities=28% Similarity=0.328 Sum_probs=90.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccC-CccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTI-PDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~-p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|.++ .+|..++.|++|+.|+|++|.|++ +| .++++++|+.|+|++|++++.. |..++.+++|+.|+
T Consensus 463 ~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~l~~L~~L~ 539 (567)
T 1dce_A 463 LLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCNNRLQQSAAIQPLVSCPRLVLLN 539 (567)
T ss_dssp TTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCSSCCCSSSTTGGGGGCTTCCEEE
T ss_pred ccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCCCCCCCCCCcHHHhcCCCCCEEE
Confidence 47999999999999 889999999999999999999997 77 8999999999999999999876 99999999999999
Q ss_pred CcCccccccCch---HHhhccccccccc
Q 013258 146 LNNNSLSGLIPT---SLTTITSLNILDL 170 (447)
Q Consensus 146 l~~N~l~~~~p~---~~~~l~~L~~l~l 170 (447)
|++|++++.+|. .+..+++|+.||+
T Consensus 540 L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 540 LQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp CTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred ecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 999999987653 2345788888763
No 371
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.26 E-value=1e-11 Score=115.61 Aligned_cols=121 Identities=27% Similarity=0.350 Sum_probs=101.2
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.++. ++ .+..+++|+.|+|++|.+++. |+ +.++++|+.|+|++|++++ +|.... ++|+.|+|
T Consensus 41 ~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~L~~N~i~~~-~~-l~~l~~L~~L~L~~N~l~~-l~~~~~--~~L~~L~L 113 (263)
T 1xeu_A 41 SGVQNFNGDNSNIQS-LA-GMQFFTNLKELHLSHNQISDL-SP-LKDLTKLEELSVNRNRLKN-LNGIPS--ACLSRLFL 113 (263)
T ss_dssp TTCSEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCC-GG-GTTCSSCCEEECCSSCCSC-CTTCCC--SSCCEEEC
T ss_pred CcCcEEECcCCCccc-ch-HHhhCCCCCEEECCCCccCCC-hh-hccCCCCCEEECCCCccCC-cCcccc--CcccEEEc
Confidence 468999999999984 55 789999999999999999974 44 9999999999999999985 555333 89999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++. | .+..+++|+.|++++|++++. |....+..+..+.+.+|.
T Consensus 114 ~~N~l~~~-~-~l~~l~~L~~L~Ls~N~i~~~-~~l~~l~~L~~L~L~~N~ 161 (263)
T 1xeu_A 114 DNNELRDT-D-SLIHLKNLEILSIRNNKLKSI-VMLGFLSKLEVLDLHGNE 161 (263)
T ss_dssp CSSCCSBS-G-GGTTCTTCCEEECTTSCCCBC-GGGGGCTTCCEEECTTSC
T ss_pred cCCccCCC-h-hhcCcccccEEECCCCcCCCC-hHHccCCCCCEEECCCCc
Confidence 99999974 4 589999999999999999975 444456667777777765
No 372
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.22 E-value=1.8e-11 Score=123.61 Aligned_cols=122 Identities=31% Similarity=0.439 Sum_probs=78.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+..+ +..+++|+.|++++|.+++..| +..+++|+.|++++|++++..| +..+++|+.|++
T Consensus 243 ~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L 316 (466)
T 1o6v_A 243 TNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLEDISP--ISNLKNLTYLTL 316 (466)
T ss_dssp TTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEEC
T ss_pred CCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCcccCchh--hcCCCCCCEEEC
Confidence 357777777777776544 6677777777777777775333 6677777777777777765332 666777777777
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..| +..+++|+.|++++|.+++. +....+..+..+.+.+|.
T Consensus 317 ~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n~ 364 (466)
T 1o6v_A 317 YFNNISDISP--VSSLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHNQ 364 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSSC
T ss_pred cCCcCCCchh--hccCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCCc
Confidence 7777766554 56666677777777766654 333344455555555543
No 373
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.21 E-value=1.4e-13 Score=122.70 Aligned_cols=110 Identities=20% Similarity=0.259 Sum_probs=98.8
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|.+.+ +| .+..+++|++|++++|.++ .+|..+..+++|+.|++++|++++ +| .+..+++|++|++
T Consensus 48 ~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l 122 (198)
T 1ds9_A 48 KACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTLEELWISYNQIAS-LS-GIEKLVNLRVLYM 122 (198)
T ss_dssp TTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHCSEEEEEEEECCC-HH-HHHHHHHSSEEEE
T ss_pred CCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcCCEEECcCCcCCc-CC-ccccCCCCCEEEC
Confidence 478999999999987 66 8999999999999999999 688888889999999999999996 56 6889999999999
Q ss_pred cCccccccCc-hHHhhcccccccccccccccccCCC
Q 013258 147 NNNSLSGLIP-TSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 147 ~~N~l~~~~p-~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
++|++++..+ ..+..+++|+.|++++|.+++.+|.
T Consensus 123 ~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~ 158 (198)
T 1ds9_A 123 SNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKE 158 (198)
T ss_dssp SEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHT
T ss_pred CCCcCCchhHHHHHhcCCCCCEEEecCCcccccccc
Confidence 9999986433 5788999999999999999988775
No 374
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.19 E-value=3.1e-11 Score=121.91 Aligned_cols=122 Identities=31% Similarity=0.432 Sum_probs=103.2
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+.+. +.+..+++|+.|++++|.+++..| +..+++|+.|++++|.+++. |. +..+++|+.|++
T Consensus 221 ~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~L 294 (466)
T 1o6v_A 221 TNLDELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAP--LSGLTKLTELKLGANQISNI-SP-LAGLTALTNLEL 294 (466)
T ss_dssp TTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCC-GG-GTTCTTCSEEEC
T ss_pred CCCCEEECCCCCcccc--hhhhcCCCCCEEECCCCccccchh--hhcCCCCCEEECCCCccCcc-cc-ccCCCccCeEEc
Confidence 4689999999999863 468899999999999999997555 88999999999999999864 44 889999999999
Q ss_pred cCccccccCchHHhhcccccccccccccccccCCCCCCCCccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENNL 197 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n~ 197 (447)
++|++++..| +..+++|+.|++++|++++..| ...+..+..+.+.+|.
T Consensus 295 ~~n~l~~~~~--~~~l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~ 342 (466)
T 1o6v_A 295 NENQLEDISP--ISNLKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNK 342 (466)
T ss_dssp CSSCCSCCGG--GGGCTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSC
T ss_pred CCCcccCchh--hcCCCCCCEEECcCCcCCCchh-hccCccCCEeECCCCc
Confidence 9999997654 7889999999999999998776 4456777777777764
No 375
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.19 E-value=3e-11 Score=116.88 Aligned_cols=104 Identities=25% Similarity=0.412 Sum_probs=92.9
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++. +.+..+++|++|++++|.+++. +.+..+++|+.|++++|.+++..|..+..+++|++|++
T Consensus 243 ~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~L~~n~l~~~~~~~l~~l~~L~~L~L 318 (347)
T 4fmz_A 243 SQLTWLEIGTNQISDI--NAVKDLTKLKMLNVGSNQISDI--SVLNNLSQLNSLFLNNNQLGNEDMEVIGGLTNLTTLFL 318 (347)
T ss_dssp TTCCEEECCSSCCCCC--GGGTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCGGGHHHHHTCTTCSEEEC
T ss_pred CCCCEEECCCCccCCC--hhHhcCCCcCEEEccCCccCCC--hhhcCCCCCCEEECcCCcCCCcChhHhhccccCCEEEc
Confidence 5799999999999874 5689999999999999999964 46899999999999999999888999999999999999
Q ss_pred cCccccccCchHHhhccccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
++|++++..| +..+++|+.|++++|.++
T Consensus 319 ~~n~l~~~~~--~~~l~~L~~L~l~~N~i~ 346 (347)
T 4fmz_A 319 SQNHITDIRP--LASLSKMDSADFANQVIK 346 (347)
T ss_dssp CSSSCCCCGG--GGGCTTCSEESSSCC---
T ss_pred cCCccccccC--hhhhhccceeehhhhccc
Confidence 9999998766 889999999999999986
No 376
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.18 E-value=4.5e-11 Score=120.40 Aligned_cols=103 Identities=22% Similarity=0.220 Sum_probs=78.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
..++.|+|++|...+.+ .+..+++|+.|++++|.+++ +| ++.+++|+.|++++|++++. .++.+++|+.|++
T Consensus 148 ~~L~~L~l~~n~~~~~~--~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~~~---~l~~l~~L~~L~L 219 (457)
T 3bz5_A 148 TQLTELDCHLNKKITKL--DVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNITKL---DLNQNIQLTFLDC 219 (457)
T ss_dssp TTCCEEECTTCSCCCCC--CCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCSCC---CCTTCTTCSEEEC
T ss_pred CcCCEEECCCCCccccc--ccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCCee---ccccCCCCCEEEC
Confidence 46788888888666666 36778888888888888886 55 77788888888888888753 3777788888888
Q ss_pred cCccccccCchHHhhcccccccccccccccccCC
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVP 180 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p 180 (447)
++|++++ +| +..+++|+.|++++|++++..+
T Consensus 220 s~N~l~~-ip--~~~l~~L~~L~l~~N~l~~~~~ 250 (457)
T 3bz5_A 220 SSNKLTE-ID--VTPLTQLTYFDCSVNPLTELDV 250 (457)
T ss_dssp CSSCCSC-CC--CTTCTTCSEEECCSSCCSCCCC
T ss_pred cCCcccc-cC--ccccCCCCEEEeeCCcCCCcCH
Confidence 8888876 55 6777788888888888877543
No 377
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.18 E-value=2.6e-11 Score=124.88 Aligned_cols=94 Identities=30% Similarity=0.390 Sum_probs=61.2
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRL 146 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l 146 (447)
.+++.|+|++|.+++ +|. +.. +|++|+|++|.|++ +|. .+++|+.|+|++|++++ +|. .+++|+.|+|
T Consensus 100 ~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 167 (571)
T 3cvr_A 100 ASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPE---LPTSLEVLSV 167 (571)
T ss_dssp TTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCC---cCCCcCEEEC
Confidence 467778888887776 665 554 77777777777775 555 46667777777777764 554 3556666666
Q ss_pred cCccccccCchHHhhccccccccccccccc
Q 013258 147 NNNSLSGLIPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 147 ~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
++|++++ +|. +. ++|+.|++++|.|+
T Consensus 168 s~N~L~~-lp~-l~--~~L~~L~Ls~N~L~ 193 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP--ESLEALDVSTNLLE 193 (571)
T ss_dssp CSSCCSC-CCC-CC--TTCCEEECCSSCCS
T ss_pred CCCCCCC-cch-hh--CCCCEEECcCCCCC
Confidence 6666665 444 43 55666666666665
No 378
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.17 E-value=5.7e-11 Score=119.63 Aligned_cols=116 Identities=22% Similarity=0.307 Sum_probs=67.9
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCc
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLN 147 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~ 147 (447)
+++.|+|++|.+++. | .+..+++|++|+|++|.+++ +| ++.+++|++|++++|++++ +| ++++++|++|+++
T Consensus 43 ~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~-~~--~~~l~~L~~L~Ls~N~l~~-~~--~~~l~~L~~L~L~ 114 (457)
T 3bz5_A 43 TLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITT-LD--LSQNTNLTYLACDSNKLTN-LD--VTPLTKLTYLNCD 114 (457)
T ss_dssp TCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSC-CC--CTTCTTCSEEECCSSCCSC-CC--CTTCTTCCEEECC
T ss_pred CCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCe-Ec--cccCCCCCEEECcCCCCce-ee--cCCCCcCCEEECC
Confidence 466666666666653 3 56666666666666666665 33 5666666666666666664 23 5666666666666
Q ss_pred CccccccCchHHhhcccccccccccccccccCCCCCCCCcccccccccc
Q 013258 148 NNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPDNGSFSQFTPISFENN 196 (447)
Q Consensus 148 ~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~~~~~~~~~~~~~~~n 196 (447)
+|++++ +| ++.+++|+.|++++|++++. | .+.+..+..+.+.+|
T Consensus 115 ~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l-~-l~~l~~L~~L~l~~n 158 (457)
T 3bz5_A 115 TNKLTK-LD--VSQNPLLTYLNCARNTLTEI-D-VSHNTQLTELDCHLN 158 (457)
T ss_dssp SSCCSC-CC--CTTCTTCCEEECTTSCCSCC-C-CTTCTTCCEEECTTC
T ss_pred CCcCCe-ec--CCCCCcCCEEECCCCcccee-c-cccCCcCCEEECCCC
Confidence 666665 33 55666666666666666652 2 233344444444433
No 379
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.16 E-value=7e-11 Score=109.29 Aligned_cols=126 Identities=14% Similarity=0.048 Sum_probs=93.2
Q ss_pred ccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecCCceEEEeecCCCCChhh
Q 013258 304 GRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTVTEKLLVYPYMTNGSVAS 381 (447)
Q Consensus 304 g~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~~~~~lv~e~~~~gsL~~ 381 (447)
+.|..+.||+....+|+.+++|..... ....+.+|+++++.+.+.+ +.+++++....+..++||||++|.++.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~----~~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSG----ALNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSC----TTSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT-
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCcc----cchhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC-
Confidence 455669999998777888999987543 1235788999998886545 456888888777889999999998873
Q ss_pred HhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC---------------------------------------------
Q 013258 382 RLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC--------------------------------------------- 416 (447)
Q Consensus 382 ~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~--------------------------------------------- 416 (447)
... .+ ...++.++++.|..||+..
T Consensus 104 -~~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 -SSH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp -TSC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred -cCc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 211 11 2356777778888888641
Q ss_pred ----------CCCeeecCCCCCceeeCCCCceeeccccc
Q 013258 417 ----------DPKIIHRDVKAANILLDEDADQSSKTILR 445 (447)
Q Consensus 417 ----------~~~ivHrDlkp~NILl~~~~~~~i~df~~ 445 (447)
.+.++|+|++|.|||++++....+.||.-
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~ 211 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGR 211 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTT
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchh
Confidence 11399999999999998876677999853
No 380
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.13 E-value=1e-10 Score=117.64 Aligned_cols=79 Identities=30% Similarity=0.439 Sum_probs=37.4
Q ss_pred CCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccccccc
Q 013258 91 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDL 170 (447)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 170 (447)
++|++|++++|.+++ +| .++++++|++|++++|++++ +|..+ .+|++|++++|++++ +| .++.+++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 345555555555553 44 35555555555555555543 34322 244455555554443 33 2444444444444
Q ss_pred ccccccc
Q 013258 171 SNNRLSG 177 (447)
Q Consensus 171 s~N~l~g 177 (447)
++|.+++
T Consensus 203 ~~N~l~~ 209 (454)
T 1jl5_A 203 DNNSLKK 209 (454)
T ss_dssp CSSCCSS
T ss_pred CCCcCCc
Confidence 4444443
No 381
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.13 E-value=8.8e-12 Score=120.07 Aligned_cols=110 Identities=21% Similarity=0.194 Sum_probs=75.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCC-CChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGH-IPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
..++.|++++|.+.+..+. +..+++|++|+|++|.+++. +|..+..+++|+.|++++|.+++..|..++.+++|++|+
T Consensus 70 ~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~ 148 (336)
T 2ast_B 70 QGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLN 148 (336)
T ss_dssp TTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEE
T ss_pred ccceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEE
Confidence 3466677777766665444 55677777777777777654 666677777777777777777766677777777777777
Q ss_pred CcCc-cccc-cCchHHhhcccccccccccc-cccc
Q 013258 146 LNNN-SLSG-LIPTSLTTITSLNILDLSNN-RLSG 177 (447)
Q Consensus 146 l~~N-~l~~-~~p~~~~~l~~L~~l~ls~N-~l~g 177 (447)
+++| .+++ .+|..+..+++|+.|++++| .+++
T Consensus 149 L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 149 LSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp CTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred CCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 7777 5654 25666677777777777777 6664
No 382
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.12 E-value=1.4e-11 Score=121.34 Aligned_cols=132 Identities=20% Similarity=0.259 Sum_probs=108.0
Q ss_pred CCEEEEEcCCCCcc-cccc---ccccCCCCCCEEECCCCccC--C---CCChhhcCCCCCcEEEccCCccc----ccCCc
Q 013258 67 GSVTRVDLGNAALS-GELA---PELGQLKNLELLELYGNNLS--G---HIPSALGNLIKLKSLDLYSNLFN----GTIPD 133 (447)
Q Consensus 67 ~~v~~l~L~~~~l~-g~~~---~~l~~l~~L~~L~L~~N~l~--~---~~p~~~~~l~~L~~L~ls~N~l~----g~~p~ 133 (447)
.+++.|+|++|.++ +.++ ..+..+++|++|+|++|.++ | .+|..+..+++|+.|+|++|.++ +.+|.
T Consensus 159 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~ 238 (386)
T 2ca6_A 159 PPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAI 238 (386)
T ss_dssp CCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHH
T ss_pred CCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHH
Confidence 67999999999998 4455 56788999999999999998 3 35558889999999999999996 67889
Q ss_pred cccCCCCCCeeeCcCcccccc----CchHHhh--cccccccccccccccc----cCCCCC--CCCcccccccccccc
Q 013258 134 TLANLKQLKYLRLNNNSLSGL----IPTSLTT--ITSLNILDLSNNRLSG----PVPDNG--SFSQFTPISFENNLN 198 (447)
Q Consensus 134 ~~~~l~~L~~L~l~~N~l~~~----~p~~~~~--l~~L~~l~ls~N~l~g----~~p~~~--~~~~~~~~~~~~n~~ 198 (447)
.+..+++|++|+|++|.+++. +|..+.. +++|+.|++++|.+++ .+|... .+..+..+.+.+|..
T Consensus 239 ~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~~l~~~l~~L~~L~l~~N~l 315 (386)
T 2ca6_A 239 ALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKTVIDEKMPDLLFLELNGNRF 315 (386)
T ss_dssp HGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHHHHHHHCTTCCEEECTTSBS
T ss_pred HHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHHHHHhcCCCceEEEccCCcC
Confidence 999999999999999999876 5666644 8899999999999998 455432 246677777777753
No 383
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.12 E-value=6e-12 Score=123.89 Aligned_cols=131 Identities=22% Similarity=0.277 Sum_probs=107.4
Q ss_pred CCEEEEEcCCCCccc----cccccccCC---------CCCCEEECCCCccC-CCCC---hhhcCCCCCcEEEccCCccc-
Q 013258 67 GSVTRVDLGNAALSG----ELAPELGQL---------KNLELLELYGNNLS-GHIP---SALGNLIKLKSLDLYSNLFN- 128 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g----~~~~~l~~l---------~~L~~L~L~~N~l~-~~~p---~~~~~l~~L~~L~ls~N~l~- 128 (447)
.+++.|+|++|.+++ .++..+..+ ++|++|+|++|+++ +.+| ..+..+++|+.|+|++|+++
T Consensus 122 ~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 201 (386)
T 2ca6_A 122 TPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRP 201 (386)
T ss_dssp TTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCH
T ss_pred CCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCH
Confidence 579999999999974 356667777 89999999999998 4556 57788999999999999997
Q ss_pred -c---cCCccccCCCCCCeeeCcCcccc----ccCchHHhhccccccccccccccccc----CCCC---CCCCccccccc
Q 013258 129 -G---TIPDTLANLKQLKYLRLNNNSLS----GLIPTSLTTITSLNILDLSNNRLSGP----VPDN---GSFSQFTPISF 193 (447)
Q Consensus 129 -g---~~p~~~~~l~~L~~L~l~~N~l~----~~~p~~~~~l~~L~~l~ls~N~l~g~----~p~~---~~~~~~~~~~~ 193 (447)
| .+|..+..+++|+.|+|++|.++ +.+|..+..+++|+.|++++|.+++. +|.. +.+..+..+.+
T Consensus 202 ~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L 281 (386)
T 2ca6_A 202 EGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRL 281 (386)
T ss_dssp HHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEEC
T ss_pred hHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEEC
Confidence 3 45558899999999999999996 67888999999999999999999865 3332 23556666777
Q ss_pred cccc
Q 013258 194 ENNL 197 (447)
Q Consensus 194 ~~n~ 197 (447)
.+|.
T Consensus 282 ~~n~ 285 (386)
T 2ca6_A 282 QYNE 285 (386)
T ss_dssp CSSC
T ss_pred cCCc
Confidence 6664
No 384
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.12 E-value=2.1e-10 Score=111.73 Aligned_cols=138 Identities=12% Similarity=0.192 Sum_probs=101.1
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcc--cccccccHHHHHHHHHHHhcCC--CCCccceeeEEecC---CceEEEee
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLK--EERTSGGELQFQTEVKIISMAV--HRNLLRLYGFCTTV---TEKLLVYP 372 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~--~~~~~~~~~~~~~E~~~l~~l~--H~niv~l~~~~~~~---~~~~lv~e 372 (447)
.+.++.|.++.||+.... +..+++|+.. ..........+.+|.++++.+. +..+.+++.++.+. +..++|||
T Consensus 43 ~~~l~~G~sn~~y~v~~~-~~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme 121 (359)
T 3dxp_A 43 VEQFKGGQSNPTFKLVTP-GQTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIME 121 (359)
T ss_dssp EEECCC-CCSCEEEEECS-SCEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEE
T ss_pred EEEcCCcccceEEEEEEC-CceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEE
Confidence 467889999999998875 4678888775 3322122346888999999887 45578888888766 34899999
Q ss_pred cCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC------------------------------------
Q 013258 373 YMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC------------------------------------ 416 (447)
Q Consensus 373 ~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~------------------------------------ 416 (447)
|++|..+.+.. ...++...+..++.++++.|+.||+..
T Consensus 122 ~v~G~~l~~~~------~~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 122 FVSGRVLWDQS------LPGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCCBCCCCTT------CTTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred ecCCeecCCCc------cccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99988774321 112667788899999999999999731
Q ss_pred -------------------CCCeeecCCCCCceeeCCCCc--eeecccc
Q 013258 417 -------------------DPKIIHRDVKAANILLDEDAD--QSSKTIL 444 (447)
Q Consensus 417 -------------------~~~ivHrDlkp~NILl~~~~~--~~i~df~ 444 (447)
.+.++|+|+++.|||+++++. ..|.||.
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe 244 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWE 244 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCT
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcc
Confidence 246999999999999998764 5888985
No 385
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.11 E-value=1e-11 Score=119.59 Aligned_cols=131 Identities=21% Similarity=0.267 Sum_probs=97.6
Q ss_pred CCEEEEEcCCCCcccc-ccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCC-ccccc-CCccccCCCCCCe
Q 013258 67 GSVTRVDLGNAALSGE-LAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSN-LFNGT-IPDTLANLKQLKY 143 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~-~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N-~l~g~-~p~~~~~l~~L~~ 143 (447)
.+++.|+|++|.+++. ++..+..+++|++|+|++|.+++..|..++.+++|+.|++++| .+++. +|..+.++++|++
T Consensus 93 ~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~ 172 (336)
T 2ast_B 93 FRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDE 172 (336)
T ss_dssp BCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCE
T ss_pred CCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCE
Confidence 4688889998888876 7777888888999999888888778888888888888888888 67653 6777788888888
Q ss_pred eeCcCc-ccccc-CchHHhhcc-cccccccccc--ccc-ccCCCC-CCCCccccccccccc
Q 013258 144 LRLNNN-SLSGL-IPTSLTTIT-SLNILDLSNN--RLS-GPVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 144 L~l~~N-~l~~~-~p~~~~~l~-~L~~l~ls~N--~l~-g~~p~~-~~~~~~~~~~~~~n~ 197 (447)
|++++| .+++. ++..+..++ +|+.|++++| .++ +.+|.. ..+..+..+.+.+|.
T Consensus 173 L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l~~~~ 233 (336)
T 2ast_B 173 LNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDLSDSV 233 (336)
T ss_dssp EECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEECTTCT
T ss_pred EcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeCCCCC
Confidence 888888 88754 577778888 8888888888 444 223321 123445555555553
No 386
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.09 E-value=7.7e-11 Score=114.41 Aligned_cols=117 Identities=20% Similarity=0.235 Sum_probs=84.3
Q ss_pred CccceeEeCCC----------CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCCh-hhcCCCCCcE-EEcc
Q 013258 56 CTWFHITCNPE----------GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPS-ALGNLIKLKS-LDLY 123 (447)
Q Consensus 56 c~w~gv~c~~~----------~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~-L~ls 123 (447)
|+|..|.|... .+++.|+|++|+++...+..|.+|++|++|+|++|.+.+.+|. .|.++++++. ++++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 57888888521 3578888888888854445678888888888888888766654 5677877664 5666
Q ss_pred CCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccccccccc
Q 013258 124 SNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 172 (447)
Q Consensus 124 ~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~ 172 (447)
+|+++...|..|..+++|++|++++|++++..+..+....++..+++++
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~ 137 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQD 137 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEES
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhcc
Confidence 7888876677888888888888888888766555554444555555544
No 387
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.07 E-value=7.5e-11 Score=115.06 Aligned_cols=112 Identities=23% Similarity=0.265 Sum_probs=89.6
Q ss_pred CCEEEEEcCCCCcccccc----ccccCCC-CCCEEECCCCccCCCCChhhcCC-----CCCcEEEccCCcccccCCcccc
Q 013258 67 GSVTRVDLGNAALSGELA----PELGQLK-NLELLELYGNNLSGHIPSALGNL-----IKLKSLDLYSNLFNGTIPDTLA 136 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~----~~l~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~ls~N~l~g~~p~~~~ 136 (447)
.+++.|||++|.+++..+ ..+..++ +|++|+|++|.+++..+..+..+ ++|+.|+|++|.+++..+..+.
T Consensus 22 ~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~ 101 (362)
T 3goz_A 22 HGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELV 101 (362)
T ss_dssp TTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHH
T ss_pred CCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHH
Confidence 358899999999887766 6677888 89999999999988777777775 8899999999999876666444
Q ss_pred ----CC-CCCCeeeCcCccccccCchHHhhc-----cccccccccccccccc
Q 013258 137 ----NL-KQLKYLRLNNNSLSGLIPTSLTTI-----TSLNILDLSNNRLSGP 178 (447)
Q Consensus 137 ----~l-~~L~~L~l~~N~l~~~~p~~~~~l-----~~L~~l~ls~N~l~g~ 178 (447)
.+ ++|++|+|++|++++..+..+... ++|+.|++++|.+++.
T Consensus 102 ~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~ 153 (362)
T 3goz_A 102 KTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIK 153 (362)
T ss_dssp HHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGS
T ss_pred HHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHH
Confidence 34 789999999999987776665542 5899999999998853
No 388
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.07 E-value=5.9e-11 Score=115.79 Aligned_cols=113 Identities=29% Similarity=0.309 Sum_probs=74.7
Q ss_pred CEEEEEcCCCCccccccccccCC-----CCCCEEECCCCccCCCCChhhcC----C-CCCcEEEccCCcccccCCcccc-
Q 013258 68 SVTRVDLGNAALSGELAPELGQL-----KNLELLELYGNNLSGHIPSALGN----L-IKLKSLDLYSNLFNGTIPDTLA- 136 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l-----~~L~~L~L~~N~l~~~~p~~~~~----l-~~L~~L~ls~N~l~g~~p~~~~- 136 (447)
+++.|+|++|.+++..+..+..+ ++|++|+|++|.+++..+..+.. + ++|+.|+|++|++++..+..+.
T Consensus 52 ~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~ 131 (362)
T 3goz_A 52 SVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQ 131 (362)
T ss_dssp TCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHH
T ss_pred ceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHH
Confidence 57778888887777666666554 77788888888777665554433 3 6778888888877755444433
Q ss_pred ---C-CCCCCeeeCcCccccccCc----hHHhhcc-cccccccccccccccCC
Q 013258 137 ---N-LKQLKYLRLNNNSLSGLIP----TSLTTIT-SLNILDLSNNRLSGPVP 180 (447)
Q Consensus 137 ---~-l~~L~~L~l~~N~l~~~~p----~~~~~l~-~L~~l~ls~N~l~g~~p 180 (447)
. .++|++|+|++|.+++..+ ..+..++ +|+.|++++|.+++..+
T Consensus 132 ~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~ 184 (362)
T 3goz_A 132 AFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLASKNC 184 (362)
T ss_dssp HHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCH
T ss_pred HHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCchhhH
Confidence 2 2577788888887775333 3334444 77788888887776543
No 389
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.02 E-value=2.4e-10 Score=115.01 Aligned_cols=102 Identities=25% Similarity=0.381 Sum_probs=59.3
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCC--CCChhhc-------------CC-CCCcEEEccCCcccccC
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSG--HIPSALG-------------NL-IKLKSLDLYSNLFNGTI 131 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~--~~p~~~~-------------~l-~~L~~L~ls~N~l~g~~ 131 (447)
+++.|+|++|.+.+ +|.. +++|+.|++++|.+++ .+|..+. .+ ++|+.|++++|++++ +
T Consensus 258 ~L~~L~l~~N~l~~-l~~~---~~~L~~L~ls~N~l~~l~~~~~~L~~L~l~~N~l~~i~~~~~~L~~L~Ls~N~l~~-l 332 (454)
T 1jl5_A 258 SLEALNVRDNYLTD-LPEL---PQSLTFLDVSENIFSGLSELPPNLYYLNASSNEIRSLCDLPPSLEELNVSNNKLIE-L 332 (454)
T ss_dssp TCCEEECCSSCCSC-CCCC---CTTCCEEECCSSCCSEESCCCTTCCEEECCSSCCSEECCCCTTCCEEECCSSCCSC-C
T ss_pred ccCEEECCCCcccc-cCcc---cCcCCEEECcCCccCcccCcCCcCCEEECcCCcCCcccCCcCcCCEEECCCCcccc-c
Confidence 45555555555554 3322 2445555555555543 2222211 12 467777777777774 5
Q ss_pred CccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccc--cCCC
Q 013258 132 PDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSG--PVPD 181 (447)
Q Consensus 132 p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g--~~p~ 181 (447)
|.. +++|++|++++|++++ +|. .+++|+.|++++|++++ .+|.
T Consensus 333 p~~---~~~L~~L~L~~N~l~~-lp~---~l~~L~~L~L~~N~l~~l~~ip~ 377 (454)
T 1jl5_A 333 PAL---PPRLERLIASFNHLAE-VPE---LPQNLKQLHVEYNPLREFPDIPE 377 (454)
T ss_dssp CCC---CTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSSCCCCCT
T ss_pred ccc---CCcCCEEECCCCcccc-ccc---hhhhccEEECCCCCCCcCCCChH
Confidence 554 4677777777777774 554 35677777777777777 5554
No 390
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.01 E-value=3.1e-10 Score=118.18 Aligned_cols=81 Identities=28% Similarity=0.339 Sum_probs=43.9
Q ss_pred CCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccccccc
Q 013258 91 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDL 170 (447)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~l 170 (447)
++|+.|+|++|.+++ +| ..+++|+.|+|++|+++ .+|. .+++|+.|+|++|+++ .+|..+..+++|+.|++
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~-~lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLT-SLPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCS-CCCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCC-cCCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 445555555555553 33 23455555555555555 3444 3455666666666665 44555666666666666
Q ss_pred ccccccccCC
Q 013258 171 SNNRLSGPVP 180 (447)
Q Consensus 171 s~N~l~g~~p 180 (447)
++|++++.+|
T Consensus 292 ~~N~l~~~~~ 301 (622)
T 3g06_A 292 EGNPLSERTL 301 (622)
T ss_dssp CSCCCCHHHH
T ss_pred cCCCCCCcCH
Confidence 6666655544
No 391
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=98.92 E-value=8e-10 Score=107.20 Aligned_cols=108 Identities=18% Similarity=0.159 Sum_probs=91.5
Q ss_pred EEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCc-cccCCCCCCe-eeCcC
Q 013258 71 RVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPD-TLANLKQLKY-LRLNN 148 (447)
Q Consensus 71 ~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~-~~~~l~~L~~-L~l~~ 148 (447)
.++-++++++ .+|..+ .+++++|+|++|+|+...+..|.++++|+.|+|++|++.+.+|. .|.+++++.. ++++.
T Consensus 13 ~v~C~~~~Lt-~iP~~l--~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~ 89 (350)
T 4ay9_X 13 VFLCQESKVT-EIPSDL--PRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKA 89 (350)
T ss_dssp EEEEESTTCC-SCCTTC--CTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEE
T ss_pred EEEecCCCCC-ccCcCc--CCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccC
Confidence 5778888888 678766 36899999999999965556799999999999999998777765 6788988875 66778
Q ss_pred ccccccCchHHhhcccccccccccccccccCCC
Q 013258 149 NSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD 181 (447)
Q Consensus 149 N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~ 181 (447)
|++++..|..|..+++|+.|++++|.+++..+.
T Consensus 90 N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~ 122 (350)
T 4ay9_X 90 NNLLYINPEAFQNLPNLQYLLISNTGIKHLPDV 122 (350)
T ss_dssp TTCCEECTTSBCCCTTCCEEEEEEECCSSCCCC
T ss_pred CcccccCchhhhhccccccccccccccccCCch
Confidence 999988899999999999999999999876543
No 392
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=98.92 E-value=1.5e-09 Score=113.11 Aligned_cols=74 Identities=27% Similarity=0.346 Sum_probs=37.0
Q ss_pred CCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccccccccccCCC-CCCCCccccccc
Q 013258 115 IKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSNNRLSGPVPD-NGSFSQFTPISF 193 (447)
Q Consensus 115 ~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N~l~g~~p~-~~~~~~~~~~~~ 193 (447)
++|+.|+|++|++++ +| ..+++|+.|+|++|+++. +|. .+++|+.|++++|+++ .+|. ...+..+..+.+
T Consensus 221 ~~L~~L~Ls~N~L~~-lp---~~l~~L~~L~Ls~N~L~~-lp~---~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L 291 (622)
T 3g06_A 221 SGLKELIVSGNRLTS-LP---VLPSELKELMVSGNRLTS-LPM---LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNL 291 (622)
T ss_dssp TTCCEEECCSSCCSC-CC---CCCTTCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEEC
T ss_pred CCCCEEEccCCccCc-CC---CCCCcCcEEECCCCCCCc-CCc---ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEe
Confidence 344555555555542 33 233455555666665553 333 3455666666666666 3343 223344444555
Q ss_pred cccc
Q 013258 194 ENNL 197 (447)
Q Consensus 194 ~~n~ 197 (447)
.+|+
T Consensus 292 ~~N~ 295 (622)
T 3g06_A 292 EGNP 295 (622)
T ss_dssp CSCC
T ss_pred cCCC
Confidence 5553
No 393
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.88 E-value=8.2e-11 Score=108.91 Aligned_cols=84 Identities=26% Similarity=0.293 Sum_probs=60.6
Q ss_pred EECCCCccC---CCCChhhcCCCCCcEEEccCCcccc--cCCccccCCCCCCeeeCcCccccccCchHHhhcc--ccccc
Q 013258 96 LELYGNNLS---GHIPSALGNLIKLKSLDLYSNLFNG--TIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTIT--SLNIL 168 (447)
Q Consensus 96 L~L~~N~l~---~~~p~~~~~l~~L~~L~ls~N~l~g--~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~--~L~~l 168 (447)
++++.|... +.++....++++|+.|+|++|++++ .+|..+..+++|+.|+|++|++++. ..+..+. +|+.|
T Consensus 148 l~l~~N~~~~~~~~l~i~~~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L 225 (267)
T 3rw6_A 148 IDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEEL 225 (267)
T ss_dssp CCCCTTSHHHHHHHHHHHHHHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEE
T ss_pred ccccCCHHHHHHHHHHHHHhhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceE
Confidence 455666332 2222223567889999999999987 5567777889999999999999865 3455555 78899
Q ss_pred ccccccccccCCC
Q 013258 169 DLSNNRLSGPVPD 181 (447)
Q Consensus 169 ~ls~N~l~g~~p~ 181 (447)
++++|.+++.+|+
T Consensus 226 ~L~~Npl~~~~~~ 238 (267)
T 3rw6_A 226 WLDGNSLCDTFRD 238 (267)
T ss_dssp ECTTSTTGGGCSS
T ss_pred EccCCcCccccCc
Confidence 9999999887764
No 394
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.85 E-value=3.6e-10 Score=113.59 Aligned_cols=131 Identities=21% Similarity=0.213 Sum_probs=96.2
Q ss_pred CCEEEEEcCCCCcccc----ccccccCCCCCCEEECCCCccCCCCChhhcC-----CCCCcEEEccCCccccc----CCc
Q 013258 67 GSVTRVDLGNAALSGE----LAPELGQLKNLELLELYGNNLSGHIPSALGN-----LIKLKSLDLYSNLFNGT----IPD 133 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~----~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~-----l~~L~~L~ls~N~l~g~----~p~ 133 (447)
..++.|+|++|.+++. ++..+..+++|++|+|++|.+++..+..+.. .++|+.|++++|.+++. +|.
T Consensus 256 ~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~ 335 (461)
T 1z7x_W 256 SRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAACCSHFSS 335 (461)
T ss_dssp CCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHH
T ss_pred CCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchHHHHHHHH
Confidence 5789999999998875 6777888899999999999887544444443 26889999999988765 566
Q ss_pred cccCCCCCCeeeCcCccccccCchHHhh-----cccccccccccccccc----cCCCC-CCCCccccccccccc
Q 013258 134 TLANLKQLKYLRLNNNSLSGLIPTSLTT-----ITSLNILDLSNNRLSG----PVPDN-GSFSQFTPISFENNL 197 (447)
Q Consensus 134 ~~~~l~~L~~L~l~~N~l~~~~p~~~~~-----l~~L~~l~ls~N~l~g----~~p~~-~~~~~~~~~~~~~n~ 197 (447)
.+..+++|++|++++|.+++..+..+.. .++|+.|++++|.+++ .+|.. ..+..+..+++.+|.
T Consensus 336 ~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N~ 409 (461)
T 1z7x_W 336 VLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNNC 409 (461)
T ss_dssp HHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSSS
T ss_pred HHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCCC
Confidence 7777888999999999887765655554 5688889999988875 44432 124455666666664
No 395
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=98.83 E-value=1.5e-10 Score=116.29 Aligned_cols=131 Identities=21% Similarity=0.179 Sum_probs=100.0
Q ss_pred CCEEEEEcCCCCccccc----cccc-cCCCCCCEEECCCCccCCC----CChhhcCCCCCcEEEccCCcccccCCccccC
Q 013258 67 GSVTRVDLGNAALSGEL----APEL-GQLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGTIPDTLAN 137 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~----~~~l-~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~ 137 (447)
.+++.|+|++|.+++.. .+.+ ..+++|++|++++|.+++. ++..+.++++|+.|++++|.+++..+..+..
T Consensus 227 ~~L~~L~Ls~n~l~~~~~~~l~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~ 306 (461)
T 1z7x_W 227 ASLRELALGSNKLGDVGMAELCPGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCE 306 (461)
T ss_dssp TTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHH
T ss_pred CCccEEeccCCcCChHHHHHHHHHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHH
Confidence 57999999999998753 2332 3689999999999999864 6888888999999999999997654444433
Q ss_pred -----CCCCCeeeCcCcccccc----CchHHhhcccccccccccccccccCCCCC------CCCccccccccccc
Q 013258 138 -----LKQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSGPVPDNG------SFSQFTPISFENNL 197 (447)
Q Consensus 138 -----l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~g~~p~~~------~~~~~~~~~~~~n~ 197 (447)
.++|++|++++|.+++. +|..+..+++|+.|++++|.+++..+... ....+..+.+.+|.
T Consensus 307 ~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~ 381 (461)
T 1z7x_W 307 TLLEPGCQLESLWVKSCSFTAACCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCD 381 (461)
T ss_dssp HHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSC
T ss_pred HhccCCccceeeEcCCCCCchHHHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCC
Confidence 36999999999999876 56777788999999999999986432210 13355566666653
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.79 E-value=1.8e-09 Score=105.62 Aligned_cols=111 Identities=19% Similarity=0.182 Sum_probs=72.2
Q ss_pred CCEEEEEcCCCCcccccccccc-CCCCCCEEECCCCccCCCCChhh-----cCCCCCcEEEccCCcccc----cCCcccc
Q 013258 67 GSVTRVDLGNAALSGELAPELG-QLKNLELLELYGNNLSGHIPSAL-----GNLIKLKSLDLYSNLFNG----TIPDTLA 136 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N~l~~~~p~~~-----~~l~~L~~L~ls~N~l~g----~~p~~~~ 136 (447)
..++.|+|++|.+++.....+. .+.+|+.|+|++|.++......+ ...++|+.|+|++|.++. .++..+.
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 4688888888887654333332 35567788888887764333333 235678888888887753 2445556
Q ss_pred CCCCCCeeeCcCcccccc----CchHHhhcccccccccccccccc
Q 013258 137 NLKQLKYLRLNNNSLSGL----IPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 137 ~l~~L~~L~l~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
.+++|++|+|++|.++.. ++..+...++|+.|++++|.++.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~ 225 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGD 225 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCH
Confidence 677788888888877642 24455566677888888887764
No 397
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.72 E-value=6.2e-09 Score=96.24 Aligned_cols=80 Identities=28% Similarity=0.304 Sum_probs=67.1
Q ss_pred cCCCCCCEEECCCCccCC--CCChhhcCCCCCcEEEccCCcccccCCccccCCC--CCCeeeCcCccccccCch------
Q 013258 88 GQLKNLELLELYGNNLSG--HIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLK--QLKYLRLNNNSLSGLIPT------ 157 (447)
Q Consensus 88 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~--~L~~L~l~~N~l~~~~p~------ 157 (447)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|++++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 468899999999999998 5678888999999999999999864 3445555 899999999999987762
Q ss_pred -HHhhcccccccc
Q 013258 158 -SLTTITSLNILD 169 (447)
Q Consensus 158 -~~~~l~~L~~l~ 169 (447)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 467788888876
No 398
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=98.64 E-value=3.5e-09 Score=103.47 Aligned_cols=86 Identities=22% Similarity=0.261 Sum_probs=35.8
Q ss_pred CCCCEEECCCCccCC----CCChhhcCCCCCcEEEccCCccccc----CCccccCCCCCCeeeCcCcccccc----CchH
Q 013258 91 KNLELLELYGNNLSG----HIPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGL----IPTS 158 (447)
Q Consensus 91 ~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~----~p~~ 158 (447)
.+|++|+|++|.++. .++..+..+++|++|+|++|.++.. ++..+...++|+.|+|++|.++.. ++..
T Consensus 155 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~ 234 (372)
T 3un9_A 155 CQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARA 234 (372)
T ss_dssp CCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHH
T ss_pred CccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHH
Confidence 444444444444432 1233334444444444444444321 233333444444444444444321 1222
Q ss_pred Hhhccccccccccccccc
Q 013258 159 LTTITSLNILDLSNNRLS 176 (447)
Q Consensus 159 ~~~l~~L~~l~ls~N~l~ 176 (447)
+...++|+.||+++|.|+
T Consensus 235 L~~~~~L~~L~Ls~N~i~ 252 (372)
T 3un9_A 235 AREHPSLELLHLYFNELS 252 (372)
T ss_dssp HHHCSSCCEEECTTSSCC
T ss_pred HHhCCCCCEEeccCCCCC
Confidence 233344444444444443
No 399
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.58 E-value=3.8e-07 Score=85.68 Aligned_cols=75 Identities=17% Similarity=0.212 Sum_probs=59.3
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC---CccceeeEEecCCceEEEeecCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---NLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
.+.|+.|.++.||+....+|+.++||+.+... ......|.+|++.|+.+++. .+.+++++. ..++||||+++
T Consensus 20 ~~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~-~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g 94 (288)
T 3d1u_A 20 VAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDE 94 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCC
T ss_pred eeeeCCcchhheEEEEeCCCCeEEEEecCCCC-cchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEeccc
Confidence 46789999999999998889999999865332 22234789999999999875 477777753 46999999999
Q ss_pred CCh
Q 013258 377 GSV 379 (447)
Q Consensus 377 gsL 379 (447)
+.+
T Consensus 95 ~~~ 97 (288)
T 3d1u_A 95 RPP 97 (288)
T ss_dssp CCC
T ss_pred CCC
Confidence 874
No 400
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.57 E-value=1.7e-08 Score=88.53 Aligned_cols=111 Identities=21% Similarity=0.253 Sum_probs=88.8
Q ss_pred CCCEEEEEcCCC-Ccccc----ccccccCCCCCCEEECCCCccCCC----CChhhcCCCCCcEEEccCCccccc----CC
Q 013258 66 EGSVTRVDLGNA-ALSGE----LAPELGQLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IP 132 (447)
Q Consensus 66 ~~~v~~l~L~~~-~l~g~----~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p 132 (447)
...++.|+|++| .++.. +...+...++|++|+|++|.+... +...+...++|++|+|++|.++.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 357999999999 88753 456677789999999999999742 455666678999999999999743 56
Q ss_pred ccccCCCCCCeeeC--cCcccccc----CchHHhhccccccccccccccc
Q 013258 133 DTLANLKQLKYLRL--NNNSLSGL----IPTSLTTITSLNILDLSNNRLS 176 (447)
Q Consensus 133 ~~~~~l~~L~~L~l--~~N~l~~~----~p~~~~~l~~L~~l~ls~N~l~ 176 (447)
..+...++|++|+| ++|.+... +...+...++|+.|++++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 67788889999999 88999754 3344555688999999999886
No 401
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.55 E-value=2.8e-07 Score=88.00 Aligned_cols=132 Identities=14% Similarity=0.172 Sum_probs=93.0
Q ss_pred CCCCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCC----CCccceeeEEecCCceEEEe
Q 013258 296 GFSNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH----RNLLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 296 ~~~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H----~niv~l~~~~~~~~~~~lv~ 371 (447)
.....+.++.|....||+. ++.+++|+..... ....+.+|.+++..+.+ ..+.+++++ +..++||
T Consensus 38 ~i~~v~~l~~G~~n~vy~v----g~~~vlR~~~~~~---~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvm 106 (320)
T 3r70_A 38 KINELRYLSSGDDSDTFLC----NEQYVVKVPKRDS---VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIM 106 (320)
T ss_dssp CCSCEEEEEECSSEEEEEE----TTTEEEEEESSHH---HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEE
T ss_pred ceEEEEeCCCCCCceEEEE----CCEEEEEeCCcHH---HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEE
Confidence 4555678999999999987 5668888764321 13358899998888866 223455544 5678999
Q ss_pred ecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCC-----------------------------------
Q 013258 372 PYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHC----------------------------------- 416 (447)
Q Consensus 372 e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~----------------------------------- 416 (447)
||++|..+...... .++..+...++.++++.|+.||+..
T Consensus 107 e~i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (320)
T 3r70_A 107 KYIKGERITYEQYH------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQL 180 (320)
T ss_dssp ECCCCBCCCHHHHT------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTC
T ss_pred eecCCccccccccc------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccc
Confidence 99999888643211 1455556667777777777777431
Q ss_pred -------------------------CCCeeecCCCCCceeeCCCCceeecccc
Q 013258 417 -------------------------DPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 417 -------------------------~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+.++|+|++|.|||++++....+.||.
T Consensus 181 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~ 233 (320)
T 3r70_A 181 LTDEMLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFG 233 (320)
T ss_dssp CCHHHHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCT
T ss_pred ccccchHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCc
Confidence 2345999999999999986667899985
No 402
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.48 E-value=2e-07 Score=88.27 Aligned_cols=132 Identities=20% Similarity=0.146 Sum_probs=90.8
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCC--ccceeeEEecCC---ceEEEeec
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRN--LLRLYGFCTTVT---EKLLVYPY 373 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~n--iv~l~~~~~~~~---~~~lv~e~ 373 (447)
.+.++.|.+..||+.. ..+++|+.+.. .....+.+|.+++..+. +.. +.+.+......+ ..|+||||
T Consensus 25 i~~~~~G~~n~v~~v~----~~~vlR~~~~~---~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~ 97 (304)
T 3sg8_A 25 IEISGEGNDCIAYEIN----RDFIFKFPKHS---RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTK 97 (304)
T ss_dssp CCEEEECSSEEEEEST----TSEEEEEESSH---HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEEC
T ss_pred eEecCCCCcceEEEEC----CEEEEEecCCc---chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcc
Confidence 4568899999999853 45788876432 22346889999998873 333 344444433332 34889999
Q ss_pred CCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC--------------------------------------
Q 013258 374 MTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH-------------------------------------- 415 (447)
Q Consensus 374 ~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~-------------------------------------- 415 (447)
++|..+.+.... .++..++..++.++++.|+.||+.
T Consensus 98 i~G~~l~~~~~~------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (304)
T 3sg8_A 98 IKGVPLTPLLLN------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMK 171 (304)
T ss_dssp CCCEECCHHHHH------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHH
T ss_pred cCCeECCccccc------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHH
Confidence 999887654322 155666777777777777777751
Q ss_pred -----------------CCCCeeecCCCCCceeeCC--CCceeecccc
Q 013258 416 -----------------CDPKIIHRDVKAANILLDE--DADQSSKTIL 444 (447)
Q Consensus 416 -----------------~~~~ivHrDlkp~NILl~~--~~~~~i~df~ 444 (447)
..+.++|+|++|.||++++ +....+.||.
T Consensus 172 ~l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~ 219 (304)
T 3sg8_A 172 KVDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFG 219 (304)
T ss_dssp HHHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCT
T ss_pred HHHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCC
Confidence 1245899999999999998 4557889985
No 403
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.38 E-value=5.1e-08 Score=101.07 Aligned_cols=110 Identities=15% Similarity=0.144 Sum_probs=63.8
Q ss_pred CEEEEEcCCCCccccccccccC-CCCCCEEECC----CCccCCC-----CChhhcCCCCCcEEEccCC--cccccCCccc
Q 013258 68 SVTRVDLGNAALSGELAPELGQ-LKNLELLELY----GNNLSGH-----IPSALGNLIKLKSLDLYSN--LFNGTIPDTL 135 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~-l~~L~~L~L~----~N~l~~~-----~p~~~~~l~~L~~L~ls~N--~l~g~~p~~~ 135 (447)
+++.|+|..+.+++..+..+.. +++|+.|+++ .|.+++. ++..+.++++|+.|+++++ .+++..+..+
T Consensus 379 ~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l~~~~~~~~ 458 (592)
T 3ogk_B 379 ELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGLTDLGLSYI 458 (592)
T ss_dssp TCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGCCHHHHHHH
T ss_pred cCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCccHHHHHHH
Confidence 5677777777777666666654 7777777774 5666642 3333555666666666532 2444433333
Q ss_pred c-CCCCCCeeeCcCccccc-cCchHHhhcccccccccccccccc
Q 013258 136 A-NLKQLKYLRLNNNSLSG-LIPTSLTTITSLNILDLSNNRLSG 177 (447)
Q Consensus 136 ~-~l~~L~~L~l~~N~l~~-~~p~~~~~l~~L~~l~ls~N~l~g 177 (447)
. .+++|++|++++|++++ .++..+..+++|+.|++++|.+++
T Consensus 459 ~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~ 502 (592)
T 3ogk_B 459 GQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSE 502 (592)
T ss_dssp HHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBH
T ss_pred HHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcH
Confidence 3 25566666666666654 233444555666666666666543
No 404
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.35 E-value=2e-06 Score=79.67 Aligned_cols=132 Identities=17% Similarity=0.102 Sum_probs=90.8
Q ss_pred CccccCCCc-eEEEEEeC-CCcEEEEEEcccccccccHHHHHHHHHHHhcCC-CCCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFG-KVYKGRLA-DGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-HRNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g-~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-H~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.+..|..| .||+.... ++..+.+|+-+.. ....+.+|...|+.+. +--+.++++++...+..++|||++++.
T Consensus 30 ~~~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~----~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~ 105 (272)
T 4gkh_A 30 ARDNVGQSGATIYRLYGKPNAPELFLKHGKGS----VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGK 105 (272)
T ss_dssp EEEECSSSSCEEEEEECCTTCCCEEEEEEETH----HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSE
T ss_pred EEccCCCcCCeEEEEEecCCCeEEEEEECCCC----CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCc
Confidence 345556555 58987754 4667888976432 2346888999888774 334678888888888999999999998
Q ss_pred ChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC------------------------------------------
Q 013258 378 SVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH------------------------------------------ 415 (447)
Q Consensus 378 sL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~------------------------------------------ 415 (447)
++.+..... ......+..+++..|.-||+.
T Consensus 106 ~~~~~~~~~--------~~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (272)
T 4gkh_A 106 TAFQVLEEY--------PDSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVE 177 (272)
T ss_dssp EHHHHHHHC--------GGGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHH
T ss_pred cccccccCC--------HHHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHH
Confidence 776654321 112334555555556655532
Q ss_pred -------------CCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 416 -------------CDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 416 -------------~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..+.++|+|+.+.|||+++++..-|.||.
T Consensus 178 ~~~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe 219 (272)
T 4gkh_A 178 QVWKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVG 219 (272)
T ss_dssp HHHHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCT
T ss_pred HHHHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECc
Confidence 11237999999999999988777788875
No 405
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=98.29 E-value=1.8e-07 Score=96.89 Aligned_cols=104 Identities=11% Similarity=0.175 Sum_probs=68.4
Q ss_pred CEEEEEcCCCC-ccc-cccccccCCCCCCEEECCCCccCCC----CChhhcCCCCCcEEEccCCccc----ccCCccccC
Q 013258 68 SVTRVDLGNAA-LSG-ELAPELGQLKNLELLELYGNNLSGH----IPSALGNLIKLKSLDLYSNLFN----GTIPDTLAN 137 (447)
Q Consensus 68 ~v~~l~L~~~~-l~g-~~~~~l~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~----g~~p~~~~~ 137 (447)
+++.|+|+++. ++. .++.....+++|++|+|++|.+++. ++..+.++++|+.|++++|.++ +.++..+.+
T Consensus 139 ~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~ 218 (592)
T 3ogk_B 139 DLETLKLDKCSGFTTDGLLSIVTHCRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARN 218 (592)
T ss_dssp GCCEEEEESCEEEEHHHHHHHHHHCTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHH
T ss_pred cCcEEECcCCCCcCHHHHHHHHhhCCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhh
Confidence 37778887765 221 1223334677788888888877654 4444566777888888877776 334555566
Q ss_pred CCCCCeeeCcCccccccCchHHhhccccccccccc
Q 013258 138 LKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLSN 172 (447)
Q Consensus 138 l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~ 172 (447)
+++|+.|++++|.+.+ +|..+..+++|+.|+++.
T Consensus 219 ~~~L~~L~L~~~~~~~-l~~~~~~~~~L~~L~l~~ 252 (592)
T 3ogk_B 219 CRSLVSVKVGDFEILE-LVGFFKAAANLEEFCGGS 252 (592)
T ss_dssp CTTCCEEECSSCBGGG-GHHHHHHCTTCCEEEECB
T ss_pred CCCCcEEeccCccHHH-HHHHHhhhhHHHhhcccc
Confidence 7777888887777765 566677777777777764
No 406
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.29 E-value=7.2e-07 Score=85.42 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=66.6
Q ss_pred CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCC-eeeCcCccccccCchHHhhcccccc
Q 013258 89 QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLK-YLRLNNNSLSGLIPTSLTTITSLNI 167 (447)
Q Consensus 89 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~-~L~l~~N~l~~~~p~~~~~l~~L~~ 167 (447)
.+++|+.|+|++|+++...+..|.++++|+.|+|++| +...-+.+|.++++|+ .+++.+ +++..-+.+|.++++|+.
T Consensus 224 ~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~ 301 (329)
T 3sb4_A 224 YMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRY 301 (329)
T ss_dssp HCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEE
T ss_pred hcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCE
Confidence 3778888888888887555566888888888888887 6644455678888888 888877 666566677888888888
Q ss_pred cccccccccccC
Q 013258 168 LDLSNNRLSGPV 179 (447)
Q Consensus 168 l~ls~N~l~g~~ 179 (447)
+++++|.++...
T Consensus 302 l~l~~n~i~~I~ 313 (329)
T 3sb4_A 302 VLATGDKITTLG 313 (329)
T ss_dssp EEECSSCCCEEC
T ss_pred EEeCCCccCccc
Confidence 888888776543
No 407
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.25 E-value=4.1e-06 Score=79.34 Aligned_cols=131 Identities=15% Similarity=0.132 Sum_probs=84.9
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC---CccceeeEEe-cCCceEEEeecCCC
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---NLLRLYGFCT-TVTEKLLVYPYMTN 376 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~-~~~~~~lv~e~~~~ 376 (447)
+.++.|....||+. ++.+++|+-+. ......+.+|.+++..+.+. .+.+.+.++. ..+..++||||++|
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~---~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G 97 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS---QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQG 97 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS---HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCS
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC---chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCC
Confidence 55778888889987 45678887432 12234688999999998753 3556666664 34567899999999
Q ss_pred CChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcC-----------------------------------------
Q 013258 377 GSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEH----------------------------------------- 415 (447)
Q Consensus 377 gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~----------------------------------------- 415 (447)
..+.+..-.. ++......++.++++.|+.||+.
T Consensus 98 ~~l~~~~~~~------l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 98 QILGEDGMAV------LPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp EECHHHHHTT------SCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred eECchhhhhh------CCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 8776532110 22333334444444444444321
Q ss_pred ----------------CCCCeeecCCCCCceeeCC---CCc-eeecccc
Q 013258 416 ----------------CDPKIIHRDVKAANILLDE---DAD-QSSKTIL 444 (447)
Q Consensus 416 ----------------~~~~ivHrDlkp~NILl~~---~~~-~~i~df~ 444 (447)
..+.++|+|++|.|||+++ ++. ..|.||.
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~ 220 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFG 220 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCT
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehh
Confidence 2346799999999999998 455 4788985
No 408
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.11 E-value=4.2e-06 Score=80.92 Aligned_cols=80 Identities=8% Similarity=-0.019 Sum_probs=54.2
Q ss_pred Ccc-ccCCCceEEEEEeC-------CCcEEEEEEcccccc--cccHHHHHHHHHHHhcCC-C--CCccceeeEEecC---
Q 013258 301 NIL-GRGGFGKVYKGRLA-------DGKLVAVKRLKEERT--SGGELQFQTEVKIISMAV-H--RNLLRLYGFCTTV--- 364 (447)
Q Consensus 301 ~~l-g~G~~g~Vy~~~~~-------~~~~vavK~~~~~~~--~~~~~~~~~E~~~l~~l~-H--~niv~l~~~~~~~--- 364 (447)
+.| +.|....+|+.... +++.+++|+...... ......+.+|.+++..+. + -.+.+++.++...
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 456 78888999988754 256788887654320 101235778888888774 2 3567788877654
Q ss_pred CceEEEeecCCCCChh
Q 013258 365 TEKLLVYPYMTNGSVA 380 (447)
Q Consensus 365 ~~~~lv~e~~~~gsL~ 380 (447)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3468999999987654
No 409
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.11 E-value=8.1e-06 Score=79.21 Aligned_cols=74 Identities=5% Similarity=-0.015 Sum_probs=54.8
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccceeeEEecC-CceEEEeecCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRLYGFCTTV-TEKLLVYPYMTN 376 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l~~~~~~~-~~~~lv~e~~~~ 376 (447)
.+.++.|....+|+... +++.+++|..... ..+.+|..++..+.... +.++++++... +..++||||++|
T Consensus 46 i~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~------~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G 118 (362)
T 3ovc_A 46 LMQLSEGEESRAFSFDV-GGRGYVLRVNSCA------DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQG 118 (362)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEESCC------HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCS
T ss_pred EEECCCCCcceEEEEEE-CCcEEEEEeCCch------hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCC
Confidence 46688899999999876 5788899976432 25888999988886544 45677776654 568999999987
Q ss_pred CChh
Q 013258 377 GSVA 380 (447)
Q Consensus 377 gsL~ 380 (447)
..+.
T Consensus 119 ~~l~ 122 (362)
T 3ovc_A 119 VTLQ 122 (362)
T ss_dssp EETT
T ss_pred CCcc
Confidence 6553
No 410
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.07 E-value=4.8e-07 Score=93.67 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=86.4
Q ss_pred CCEEEEEcCCCCcccccccccc-CCCCCCEEECC--C----CccCCC-----CChhhcCCCCCcEEEccCCcccccCCcc
Q 013258 67 GSVTRVDLGNAALSGELAPELG-QLKNLELLELY--G----NNLSGH-----IPSALGNLIKLKSLDLYSNLFNGTIPDT 134 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~--~----N~l~~~-----~p~~~~~l~~L~~L~ls~N~l~g~~p~~ 134 (447)
.+++.|++..+.+++.....+. .+++|+.|+|+ + |.+++. ++..+.++++|+.|++++ .+++..+..
T Consensus 372 ~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~~~~~~ 450 (594)
T 2p1m_B 372 PKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTDKVFEY 450 (594)
T ss_dssp TTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCHHHHHH
T ss_pred hhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccHHHHHH
Confidence 3577788888888877666665 58888888888 3 555521 222356778888888876 565555555
Q ss_pred ccC-CCCCCeeeCcCccccccCchHH-hhcccccccccccccccccCCC--CCCCCccccccccccc
Q 013258 135 LAN-LKQLKYLRLNNNSLSGLIPTSL-TTITSLNILDLSNNRLSGPVPD--NGSFSQFTPISFENNL 197 (447)
Q Consensus 135 ~~~-l~~L~~L~l~~N~l~~~~p~~~-~~l~~L~~l~ls~N~l~g~~p~--~~~~~~~~~~~~~~n~ 197 (447)
+.. +++|+.|+|++|.+++..+..+ ..+++|+.|++++|.+++..+. ...+..++.+.+.+|.
T Consensus 451 l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~~ 517 (594)
T 2p1m_B 451 IGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSCS 517 (594)
T ss_dssp HHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESSC
T ss_pred HHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCCC
Confidence 554 7888888888888876555444 5678888888888888543221 1224555555565553
No 411
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=98.02 E-value=2.7e-06 Score=81.38 Aligned_cols=101 Identities=14% Similarity=0.116 Sum_probs=81.7
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCc-EEEccCCcccccCCccccCCCCCCeee
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLK-SLDLYSNLFNGTIPDTLANLKQLKYLR 145 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~-~L~ls~N~l~g~~p~~~~~l~~L~~L~ 145 (447)
.+++.|+|++|++...-+..|.++.+|+.|+|++| +...-+..|.++++|+ .+++++ +++..-+.+|.++++|+.++
T Consensus 226 ~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~ 303 (329)
T 3sb4_A 226 PNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVL 303 (329)
T ss_dssp TTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEE
T ss_pred CCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEE
Confidence 36888899988887655566888999999999887 7766667788899998 999988 66645567888899999999
Q ss_pred CcCccccccCchHHhhcccccccc
Q 013258 146 LNNNSLSGLIPTSLTTITSLNILD 169 (447)
Q Consensus 146 l~~N~l~~~~p~~~~~l~~L~~l~ 169 (447)
++.|+++...+.+|.++++|+.++
T Consensus 304 l~~n~i~~I~~~aF~~~~~L~~ly 327 (329)
T 3sb4_A 304 ATGDKITTLGDELFGNGVPSKLIY 327 (329)
T ss_dssp ECSSCCCEECTTTTCTTCCCCEEE
T ss_pred eCCCccCccchhhhcCCcchhhhc
Confidence 988988877777888888888765
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.00 E-value=1.8e-06 Score=75.43 Aligned_cols=96 Identities=23% Similarity=0.225 Sum_probs=75.9
Q ss_pred cccccccCCCCCCEEECCCC-ccCCC----CChhhcCCCCCcEEEccCCccccc----CCccccCCCCCCeeeCcCcccc
Q 013258 82 ELAPELGQLKNLELLELYGN-NLSGH----IPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLS 152 (447)
Q Consensus 82 ~~~~~l~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~ 152 (447)
.+...+...++|++|+|++| .+... +...+...++|++|+|++|.+... +...+...++|++|+|++|.+.
T Consensus 27 ~l~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~ 106 (185)
T 1io0_A 27 TLKRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFIS 106 (185)
T ss_dssp HHHHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCC
T ss_pred HHHHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCC
Confidence 45556788999999999999 88742 455677789999999999999642 4455666789999999999997
Q ss_pred cc----CchHHhhccccccccc--ccccccc
Q 013258 153 GL----IPTSLTTITSLNILDL--SNNRLSG 177 (447)
Q Consensus 153 ~~----~p~~~~~l~~L~~l~l--s~N~l~g 177 (447)
.. +...+...++|+.|++ ++|.+..
T Consensus 107 ~~g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 107 GSGILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 54 3455666678999999 8899864
No 413
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.00 E-value=1.8e-06 Score=83.71 Aligned_cols=127 Identities=16% Similarity=0.245 Sum_probs=78.1
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhc--CCCCCcEEEccC--Cccccc-----CCccc--
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALG--NLIKLKSLDLYS--NLFNGT-----IPDTL-- 135 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~--~l~~L~~L~ls~--N~l~g~-----~p~~~-- 135 (447)
.+++.|+|+++.- -.+++ + .+.+|++|+|..+.++...-..+. .+++|+.|+|+. |...|. +...+
T Consensus 172 P~L~~L~L~g~~~-l~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~ 248 (362)
T 2ra8_A 172 PLLNNLKIKGTNN-LSIGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSK 248 (362)
T ss_dssp TTCCEEEEECCBT-CBCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCT
T ss_pred CCCcEEEEeCCCC-ceecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhc
Confidence 4788899887621 13333 3 378899999888877643333343 688888888863 222211 11122
Q ss_pred cCCCCCCeeeCcCccccccCchHHh---hccccccccccccccccc----CCCC-CCCCcccccccccc
Q 013258 136 ANLKQLKYLRLNNNSLSGLIPTSLT---TITSLNILDLSNNRLSGP----VPDN-GSFSQFTPISFENN 196 (447)
Q Consensus 136 ~~l~~L~~L~l~~N~l~~~~p~~~~---~l~~L~~l~ls~N~l~g~----~p~~-~~~~~~~~~~~~~n 196 (447)
..+++|++|+|++|.+....+..+. .+++|+.|+++.|.+++. ++.. ..+.++..+.+..|
T Consensus 249 ~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n 317 (362)
T 2ra8_A 249 DRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYN 317 (362)
T ss_dssp TTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSB
T ss_pred CCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCC
Confidence 2468888999988888765555554 367888899988888753 2222 12344555555444
No 414
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=97.97 E-value=3.2e-05 Score=73.97 Aligned_cols=138 Identities=16% Similarity=0.221 Sum_probs=75.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC-----CCCcccee-e--EEecCCceEEEee
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV-----HRNLLRLY-G--FCTTVTEKLLVYP 372 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~-----H~niv~l~-~--~~~~~~~~~lv~e 372 (447)
+.|+.|..+.||+....+| .+++|+.... ..++..|..++..+. .|.++.-. | +....+..+++||
T Consensus 38 ~~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-----~~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~ 111 (346)
T 2q83_A 38 DVIQGNQMALVWKVHTDSG-AVCLKRIHRP-----EKKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYD 111 (346)
T ss_dssp EECC----CEEEEEEETTE-EEEEEEECSC-----HHHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEE
T ss_pred eeccccccCcEEEEEeCCC-CEEEEecCCC-----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEE
Confidence 3455677889999987554 5889988542 123344555554442 24433311 1 1123566789999
Q ss_pred cCCCCChh--------------hHhhccCCCC----------CCCChHHHH-----------------------------
Q 013258 373 YMTNGSVA--------------SRLRERQSSL----------PPLDWPTRK----------------------------- 399 (447)
Q Consensus 373 ~~~~gsL~--------------~~l~~~~~~~----------~~l~~~~~~----------------------------- 399 (447)
|++|..+. ..++...... ..-.|....
T Consensus 112 ~i~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 191 (346)
T 2q83_A 112 WIEGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQE 191 (346)
T ss_dssp CCCCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHH
T ss_pred eecCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHH
Confidence 99986542 1122110000 012342210
Q ss_pred --HHHHHHHHHHhhhhc----------CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 400 --KIALGSARGLSYLHE----------HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 400 --~i~~~ia~gL~yLH~----------~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
.+..++..++++|+. ...+.++|+|+++.|||++.++.+.+.||.
T Consensus 192 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe 248 (346)
T 2q83_A 192 IDGFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLD 248 (346)
T ss_dssp HHHHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCT
T ss_pred HHHHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehh
Confidence 111123445666653 123589999999999999888889999985
No 415
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=97.97 E-value=2.3e-06 Score=88.47 Aligned_cols=107 Identities=18% Similarity=0.199 Sum_probs=77.8
Q ss_pred CCEEEEEcCCCCcccccccccc-CCCCCCEEECCCC-ccCCC-CChhhcCCCCCcEEEccCCcccccCCcccc----CCC
Q 013258 67 GSVTRVDLGNAALSGELAPELG-QLKNLELLELYGN-NLSGH-IPSALGNLIKLKSLDLYSNLFNGTIPDTLA----NLK 139 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~----~l~ 139 (447)
.+++.|+|+++.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+. .++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 3688999999998887777775 6889999999988 55432 455556789999999999988765444443 567
Q ss_pred CCCeeeCcCcc--ccc-cCchHHhhcccccccccccc
Q 013258 140 QLKYLRLNNNS--LSG-LIPTSLTTITSLNILDLSNN 173 (447)
Q Consensus 140 ~L~~L~l~~N~--l~~-~~p~~~~~l~~L~~l~ls~N 173 (447)
+|+.|++++|. +.. .++..+..+++|+.|++++|
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~ 221 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRA 221 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCC
Confidence 89999998887 221 12222345588899998887
No 416
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=97.93 E-value=4.2e-05 Score=75.06 Aligned_cols=76 Identities=9% Similarity=0.022 Sum_probs=49.2
Q ss_pred CCccccCCCceEEEEEeC-CCcEEEEEEcccccc------cccHHHHHHHHHHHhcCCC--CC-ccceeeEEecCCceEE
Q 013258 300 KNILGRGGFGKVYKGRLA-DGKLVAVKRLKEERT------SGGELQFQTEVKIISMAVH--RN-LLRLYGFCTTVTEKLL 369 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~-~~~~vavK~~~~~~~------~~~~~~~~~E~~~l~~l~H--~n-iv~l~~~~~~~~~~~l 369 (447)
.+.+|.|.++.||++... +++.++||....... .....++..|.+++..+.. +. +.+++.+ +.+..++
T Consensus 35 ~~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~l 112 (397)
T 2olc_A 35 CQEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVT 112 (397)
T ss_dssp EEECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEE
T ss_pred EEECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEE
Confidence 357899999999999754 468899998643211 1122356788888887642 33 4455543 3455789
Q ss_pred EeecCCCC
Q 013258 370 VYPYMTNG 377 (447)
Q Consensus 370 v~e~~~~g 377 (447)
||||+++.
T Consensus 113 vmE~l~g~ 120 (397)
T 2olc_A 113 VMEDLSHL 120 (397)
T ss_dssp EECCCTTS
T ss_pred EEEeCCCc
Confidence 99999764
No 417
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.85 E-value=7.6e-05 Score=70.61 Aligned_cols=138 Identities=16% Similarity=0.171 Sum_probs=90.2
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCC---CCCccceeeEEecCCceEEEeecCCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAV---HRNLLRLYGFCTTVTEKLLVYPYMTN 376 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~---H~niv~l~~~~~~~~~~~lv~e~~~~ 376 (447)
.+.|+.|.+..+|+... +++.+.+|+.... ....+.+|.+.|+.+. ...+.+++.++...+..++||||+++
T Consensus 41 ~~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~----~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G 115 (312)
T 3jr1_A 41 KEKLYSGEMNEIWLIND-EVQTVFVKINERS----YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNK 115 (312)
T ss_dssp EEEECCSSSSEEEEEES-SSCEEEEEEEEGG----GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCC
T ss_pred eEEeCCccceeeeEEEE-CCCeEEEEeCCcc----cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccC
Confidence 35688999999999886 4677888976432 2446889998888774 35678888888877889999999998
Q ss_pred CChhh-----------HhhccCC-CC-----------------CCCChHHHH---HHHHH----------------HHHH
Q 013258 377 GSVAS-----------RLRERQS-SL-----------------PPLDWPTRK---KIALG----------------SARG 408 (447)
Q Consensus 377 gsL~~-----------~l~~~~~-~~-----------------~~l~~~~~~---~i~~~----------------ia~g 408 (447)
..+.. .|+.... .. ..-+|.... ++..+ +...
T Consensus 116 ~~~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~ 195 (312)
T 3jr1_A 116 SKNKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQI 195 (312)
T ss_dssp CCCCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHH
T ss_pred CCCCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHH
Confidence 76421 2232211 00 012454321 11111 1111
Q ss_pred -Hhhhhc-CCCCCeeecCCCCCceeeCCCCceeeccc
Q 013258 409 -LSYLHE-HCDPKIIHRDVKAANILLDEDADQSSKTI 443 (447)
Q Consensus 409 -L~yLH~-~~~~~ivHrDlkp~NILl~~~~~~~i~df 443 (447)
...|.. ...|.++|+|+.+.|++++.++ +.|.|+
T Consensus 196 l~~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~ 231 (312)
T 3jr1_A 196 VADTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNP 231 (312)
T ss_dssp HHHHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSC
T ss_pred HHHHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcC
Confidence 123321 2357899999999999999887 888886
No 418
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.83 E-value=0.00014 Score=67.90 Aligned_cols=76 Identities=17% Similarity=0.235 Sum_probs=54.1
Q ss_pred CCCCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC---CccceeeEEecCCceEEEeecC
Q 013258 298 SNKNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR---NLLRLYGFCTTVTEKLLVYPYM 374 (447)
Q Consensus 298 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~---niv~l~~~~~~~~~~~lv~e~~ 374 (447)
...+.+|.|..+.||+.+..+|+.|.||+-.... ......|.+|.+.|+.+.-. -+.+.+++ +..++||||+
T Consensus 18 ~~v~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~-~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l 92 (288)
T 3f7w_A 18 AAVAERGHSHRWHLYRVELADGTPLFVKALPDDA-PALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWV 92 (288)
T ss_dssp EEEEEEEEETTEEEEEEEETTSCEEEEEECCTTC-CCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECC
T ss_pred EEEEecCCCCCeEEEEEEECCCCEEEEEEeCCCC-cchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEee
Confidence 3346789999999999999999999999875432 22233588999998877422 24445543 2357999999
Q ss_pred CCCC
Q 013258 375 TNGS 378 (447)
Q Consensus 375 ~~gs 378 (447)
+++.
T Consensus 93 ~~~~ 96 (288)
T 3f7w_A 93 DERP 96 (288)
T ss_dssp CCCC
T ss_pred cccC
Confidence 8765
No 419
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=97.72 E-value=1.1e-05 Score=78.06 Aligned_cols=126 Identities=17% Similarity=0.201 Sum_probs=67.2
Q ss_pred CEEEEEcCCCCc---------cccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCcccc--
Q 013258 68 SVTRVDLGNAAL---------SGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLA-- 136 (447)
Q Consensus 68 ~v~~l~L~~~~l---------~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~-- 136 (447)
+++.|.|..+.. .+.+.+.+..+++|+.|+|++|.-. .+|. + .+++|+.|+|..+.++...-..+.
T Consensus 140 ~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~ 216 (362)
T 2ra8_A 140 HFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDILGS 216 (362)
T ss_dssp TCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHHHS
T ss_pred hhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHHHc
Confidence 566676655432 1224455566777888888776311 2333 3 267788888877766543333333
Q ss_pred CCCCCCeeeCcC--ccccccC-----chHH--hhcccccccccccccccccCC----CCCCCCcccccccccc
Q 013258 137 NLKQLKYLRLNN--NSLSGLI-----PTSL--TTITSLNILDLSNNRLSGPVP----DNGSFSQFTPISFENN 196 (447)
Q Consensus 137 ~l~~L~~L~l~~--N~l~~~~-----p~~~--~~l~~L~~l~ls~N~l~g~~p----~~~~~~~~~~~~~~~n 196 (447)
.+++|+.|+|+. |...+.. ...+ ..+++|+.|++++|.+....+ ..+.+.+++.++++.|
T Consensus 217 ~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n 289 (362)
T 2ra8_A 217 DLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAG 289 (362)
T ss_dssp BCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSS
T ss_pred cCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCC
Confidence 577788777753 2222110 1111 235678888887777764221 1123445555555444
No 420
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.48 E-value=6e-05 Score=65.88 Aligned_cols=110 Identities=15% Similarity=0.202 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCC-Cccc----cccccccCCCCCCEEECCCCccCC----CCChhhcCCCCCcEEEccCCccccc----CC
Q 013258 66 EGSVTRVDLGNA-ALSG----ELAPELGQLKNLELLELYGNNLSG----HIPSALGNLIKLKSLDLYSNLFNGT----IP 132 (447)
Q Consensus 66 ~~~v~~l~L~~~-~l~g----~~~~~l~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p 132 (447)
...++.|+|+++ .+.. .+...+..-+.|+.|+|++|.+.. .+...+..-+.|+.|+|++|.++.. +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 346888889875 7764 245566777888999999998873 3445555667889999999988632 33
Q ss_pred ccccCCCCCCeeeCcCc---ccccc----CchHHhhcccccccccccccc
Q 013258 133 DTLANLKQLKYLRLNNN---SLSGL----IPTSLTTITSLNILDLSNNRL 175 (447)
Q Consensus 133 ~~~~~l~~L~~L~l~~N---~l~~~----~p~~~~~l~~L~~l~ls~N~l 175 (447)
+++..-+.|++|+|++| .+... +-..+..-++|+.|+++.|.+
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 45555677888998865 33321 333445556788888776654
No 421
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.46 E-value=0.00045 Score=68.23 Aligned_cols=74 Identities=14% Similarity=0.110 Sum_probs=45.6
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEccccc-----c---cccHHHHHHHHHHHh-cCCCCCccceeeEEecCCceEEE
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEER-----T---SGGELQFQTEVKIIS-MAVHRNLLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~-----~---~~~~~~~~~E~~~l~-~l~H~niv~l~~~~~~~~~~~lv 370 (447)
.+.+|.|..+.||+... +++.++||...... . ......++.|+..+. ...+..+.+++.+. .+..++|
T Consensus 39 i~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv 115 (420)
T 2pyw_A 39 IKEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIG 115 (420)
T ss_dssp EEECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEE
T ss_pred EEEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEE
Confidence 36689999999999964 46789999432210 0 112223444544332 22234566777665 5667999
Q ss_pred eecC-CC
Q 013258 371 YPYM-TN 376 (447)
Q Consensus 371 ~e~~-~~ 376 (447)
|||+ ++
T Consensus 116 ~e~l~~g 122 (420)
T 2pyw_A 116 MRYLEPP 122 (420)
T ss_dssp ECCCCTT
T ss_pred EeecCCc
Confidence 9999 76
No 422
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.44 E-value=4.7e-05 Score=65.32 Aligned_cols=84 Identities=15% Similarity=0.175 Sum_probs=59.0
Q ss_pred CCEEEEEcCCCCccccccccccCCCCCCEEECCCCc-cCCCCChhhcCC----CCCcEEEccCCc-ccccCCccccCCCC
Q 013258 67 GSVTRVDLGNAALSGELAPELGQLKNLELLELYGNN-LSGHIPSALGNL----IKLKSLDLYSNL-FNGTIPDTLANLKQ 140 (447)
Q Consensus 67 ~~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~g~~p~~~~~l~~ 140 (447)
-.++.|||+++.++..--..+..+++|++|+|+++. ++..-=..++.+ ++|+.|+|+++. ++..-=..+.++++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 368999999988877655667888899999998874 553222234443 368888888874 65332234667888
Q ss_pred CCeeeCcCcc
Q 013258 141 LKYLRLNNNS 150 (447)
Q Consensus 141 L~~L~l~~N~ 150 (447)
|++|+|+++.
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 8888888875
No 423
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.42 E-value=3.9e-05 Score=65.84 Aligned_cols=84 Identities=12% Similarity=0.099 Sum_probs=63.2
Q ss_pred CCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCc-ccccCCccccCC----CCCCeeeCcCcc-ccccCchHHhhccc
Q 013258 91 KNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL-FNGTIPDTLANL----KQLKYLRLNNNS-LSGLIPTSLTTITS 164 (447)
Q Consensus 91 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~-l~g~~p~~~~~l----~~L~~L~l~~N~-l~~~~p~~~~~l~~ 164 (447)
.+|+.|||+++.++..-=..+.++++|+.|+|+++. ++..-=..++.+ ++|++|+|++|. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999885444557889999999999985 654322345543 479999999985 76543456778889
Q ss_pred cccccccccc
Q 013258 165 LNILDLSNNR 174 (447)
Q Consensus 165 L~~l~ls~N~ 174 (447)
|+.|++++..
T Consensus 141 L~~L~L~~c~ 150 (176)
T 3e4g_A 141 LKYLFLSDLP 150 (176)
T ss_dssp CCEEEEESCT
T ss_pred CCEEECCCCC
Confidence 9999998864
No 424
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.23 E-value=0.00033 Score=68.80 Aligned_cols=102 Identities=16% Similarity=0.178 Sum_probs=75.4
Q ss_pred CEEEEEcCCCCccccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccc-----ccCCccccCCCCCC
Q 013258 68 SVTRVDLGNAALSGELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN-----GTIPDTLANLKQLK 142 (447)
Q Consensus 68 ~v~~l~L~~~~l~g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~-----g~~p~~~~~l~~L~ 142 (447)
.++.++|+++ +...-...+.+ .+|+.+.| .|.++..-+..|.++++|+.+++.+|.+. ..-+.+|.++++|+
T Consensus 227 ~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L~ 303 (401)
T 4fdw_A 227 QLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKLA 303 (401)
T ss_dssp TCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTCC
T ss_pred CCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccCC
Confidence 5777888764 33222334445 78999999 55566555778889999999999988764 23456788899999
Q ss_pred eeeCcCccccccCchHHhhcccccccccccc
Q 013258 143 YLRLNNNSLSGLIPTSLTTITSLNILDLSNN 173 (447)
Q Consensus 143 ~L~l~~N~l~~~~p~~~~~l~~L~~l~ls~N 173 (447)
.++|. |.++..-..+|.++++|+.+++.+|
T Consensus 304 ~l~l~-~~i~~I~~~aF~~c~~L~~l~lp~~ 333 (401)
T 4fdw_A 304 RFEIP-ESIRILGQGLLGGNRKVTQLTIPAN 333 (401)
T ss_dssp EECCC-TTCCEECTTTTTTCCSCCEEEECTT
T ss_pred eEEeC-CceEEEhhhhhcCCCCccEEEECcc
Confidence 99998 4577666778888899999998665
No 425
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.06 E-value=0.0018 Score=61.62 Aligned_cols=76 Identities=12% Similarity=0.037 Sum_probs=38.4
Q ss_pred CccccCCCce-EEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCC--CCccceeeEEecCCceEEEeecCCCC
Q 013258 301 NILGRGGFGK-VYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVH--RNLLRLYGFCTTVTEKLLVYPYMTNG 377 (447)
Q Consensus 301 ~~lg~G~~g~-Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H--~niv~l~~~~~~~~~~~lv~e~~~~g 377 (447)
+.|+.|.... +|+....+++.+.+|....... ..+..|+.++..+.. -.+.+++.+.... -+++||++.+.
T Consensus 24 ~~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~----~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~ 97 (333)
T 3csv_A 24 TPLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG----GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDA 97 (333)
T ss_dssp CC--------CCEEEECTTCCEEEEEECCTTTT----CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSC
T ss_pred eECCCCCCCceEEEEEcCCCCeEEEEECCCCCC----ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCc
Confidence 4455554444 6677654467777776543210 124456666665532 2355666653332 37899999776
Q ss_pred ChhhH
Q 013258 378 SVASR 382 (447)
Q Consensus 378 sL~~~ 382 (447)
.+.+.
T Consensus 98 ~l~~~ 102 (333)
T 3csv_A 98 LFTEV 102 (333)
T ss_dssp BHHHH
T ss_pred chHHH
Confidence 65443
No 426
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.05 E-value=0.00061 Score=55.44 Aligned_cols=57 Identities=23% Similarity=0.316 Sum_probs=40.4
Q ss_pred CEEECCCCccC-CCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCcccc
Q 013258 94 ELLELYGNNLS-GHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLS 152 (447)
Q Consensus 94 ~~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~ 152 (447)
..++-+++.|+ ..+|..+. .+|+.|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 11 ~~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 11 TLVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp TEEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred CEEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 46778888876 34665443 46788888888887544556677888888888888775
No 427
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=97.03 E-value=0.0022 Score=62.90 Aligned_cols=79 Identities=13% Similarity=0.161 Sum_probs=45.3
Q ss_pred CCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccccccccc
Q 013258 92 NLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNILDLS 171 (447)
Q Consensus 92 ~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l~ls 171 (447)
+|+.+.+.+ .+...-+..|.++++|+.++|++|+++ .+|...-...+|+.+.|.+| ++..-..+|.++++|+.+++.
T Consensus 158 ~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~-~I~~~aF~~~~L~~l~lp~~-l~~I~~~aF~~~~~L~~l~l~ 234 (401)
T 4fdw_A 158 TVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKIT-KLPASTFVYAGIEEVLLPVT-LKEIGSQAFLKTSQLKTIEIP 234 (401)
T ss_dssp CCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCS-EECTTTTTTCCCSEEECCTT-CCEECTTTTTTCTTCCCEECC
T ss_pred CceEEEeCC-CccEehHHHhhCcccCCeeecCCCcce-EechhhEeecccCEEEeCCc-hheehhhHhhCCCCCCEEecC
Confidence 466666653 444444456666666666666666666 33333222466666666633 544445566666666666665
Q ss_pred cc
Q 013258 172 NN 173 (447)
Q Consensus 172 ~N 173 (447)
+|
T Consensus 235 ~~ 236 (401)
T 4fdw_A 235 EN 236 (401)
T ss_dssp TT
T ss_pred CC
Confidence 54
No 428
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.98 E-value=0.0012 Score=53.73 Aligned_cols=56 Identities=30% Similarity=0.382 Sum_probs=38.8
Q ss_pred EEEcCCCCcc-ccccccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCccc
Q 013258 71 RVDLGNAALS-GELAPELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFN 128 (447)
Q Consensus 71 ~l~L~~~~l~-g~~~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~ 128 (447)
.++.++++++ ..+|..+. .+|++|+|++|+|+..-+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 5666777775 35564433 35788888888888655566777888888888888664
No 429
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=96.83 E-value=0.022 Score=53.75 Aligned_cols=75 Identities=19% Similarity=0.117 Sum_probs=47.7
Q ss_pred CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCC--CccceeeE-----EecCCceEEEeec
Q 013258 301 NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHR--NLLRLYGF-----CTTVTEKLLVYPY 373 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~--niv~l~~~-----~~~~~~~~lv~e~ 373 (447)
+.++ |....||+....+|+.+++|..+... .....+..|..++..+... .+++++.. ....+..+++|||
T Consensus 32 ~~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~--~~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~ 108 (328)
T 1zyl_A 32 TPLN-SYENRVYQFQDEDRRRFVVKFYRPER--WTADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPS 108 (328)
T ss_dssp EEEC-CSSSEEEEECCTTCCCEEEEEECTTT--SCHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEEC
T ss_pred Eeec-CcccceEEEEcCCCCEEEEEEcCCCC--CCHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEe
Confidence 4466 77789999877667789999886332 1234567788877766422 24444443 1123456789999
Q ss_pred CCCCC
Q 013258 374 MTNGS 378 (447)
Q Consensus 374 ~~~gs 378 (447)
++|..
T Consensus 109 i~G~~ 113 (328)
T 1zyl_A 109 VGGRQ 113 (328)
T ss_dssp CCCEE
T ss_pred cCCCC
Confidence 98754
No 430
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=96.82 E-value=0.0045 Score=58.34 Aligned_cols=156 Identities=7% Similarity=0.032 Sum_probs=82.3
Q ss_pred ccHHHHHHHhcCCCCC-----CccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC--ccce
Q 013258 285 FSLRELQVATDGFSNK-----NILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN--LLRL 357 (447)
Q Consensus 285 ~~~~~~~~~~~~~~~~-----~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n--iv~l 357 (447)
++.+++......|... +.|+.|....+|+....+| .+++|...... ...++..|..++..+.... +.++
T Consensus 7 ~~~~~l~~~l~~~~~~~~~~~~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~---~~~~l~~e~~~l~~L~~~g~~vP~~ 82 (322)
T 2ppq_A 7 ITEDELRNFLTQYDVGSLTSYKGIAEGVENSNFLLHTTKD-PLILTLYEKRV---EKNDLPFFLGLMQHLAAKGLSCPLP 82 (322)
T ss_dssp CCHHHHHHHHTTBCCCCEEEEEEECC---EEEEEEEESSC-CEEEEEECC------CCHHHHHHHHHHHHHHTTCCCCCB
T ss_pred CCHHHHHHHHHhCCCCcceEeeccCCCcccceEEEEeCCc-cEEEEEeCCCC---CHHHHHHHHHHHHHHHHCCCCCCcc
Confidence 4455555555556542 3456677788999887555 57789875421 1224566777776654222 2333
Q ss_pred eeE------EecCCceEEEeecCCCCChhh--------------HhhccCCC--CC------CCChHHHHH---------
Q 013258 358 YGF------CTTVTEKLLVYPYMTNGSVAS--------------RLRERQSS--LP------PLDWPTRKK--------- 400 (447)
Q Consensus 358 ~~~------~~~~~~~~lv~e~~~~gsL~~--------------~l~~~~~~--~~------~l~~~~~~~--------- 400 (447)
+.. ....+..+++++|++|..+.. .++..... .. ...|.....
T Consensus 83 ~~~~~g~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 162 (322)
T 2ppq_A 83 LPRKDGELLGELSGRPAALISFLEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEV 162 (322)
T ss_dssp CCBTTCCSCEEETTEEEEEEECCCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGT
T ss_pred cCCCCCCEEEEECCEEEEEEEeCCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhh
Confidence 321 112345689999998865321 12211100 00 012322110
Q ss_pred ---HHHHHHHHHhhhhc----CCCCCeeecCCCCCceeeCCCCceeecccc
Q 013258 401 ---IALGSARGLSYLHE----HCDPKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 401 ---i~~~ia~gL~yLH~----~~~~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
+...+...+++++. .....++|+|+.+.|||++++....+.||-
T Consensus 163 ~~~l~~~l~~~~~~l~~~~~~~~~~~liHgDl~~~Nil~~~~~~~~lIDf~ 213 (322)
T 2ppq_A 163 EKGLREEIRPEIDYLAAHWPKDLPAGVIHADLFQDNVFFLGDELSGLIDFY 213 (322)
T ss_dssp STTHHHHHHHHHHHHHHHCCCSSCEEEECSCCCGGGEEEETTEEEEECCCT
T ss_pred hhhhHHHHHHHHHHHHhhCcccCCcccCCCCCCccCEEEeCCceEEEecch
Confidence 00113344445442 123479999999999999987666899984
No 431
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=96.81 E-value=0.0028 Score=59.35 Aligned_cols=71 Identities=8% Similarity=0.028 Sum_probs=43.0
Q ss_pred CCccccCCCceEEEEEeCCCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCceEEEeecC-CCC
Q 013258 300 KNILGRGGFGKVYKGRLADGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVYPYM-TNG 377 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~-~~g 377 (447)
.+.|+.|....+|+. +.+.+|+....... .....+|..++..+....+ .+++++ ..+.-++++||+ ++.
T Consensus 23 i~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~--~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~ 93 (301)
T 3dxq_A 23 PLERLGGLTNLVFRA-----GDLCLRIPGKGTEE--YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQ 93 (301)
T ss_dssp CEEEESCSSEEEEEE-----TTEEEEEECC------CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCE
T ss_pred eeEcCCcccccccee-----eeEEEECCCCCccc--eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCc
Confidence 577888999999998 45778877543211 1123567777766643333 355543 344467899999 554
Q ss_pred Ch
Q 013258 378 SV 379 (447)
Q Consensus 378 sL 379 (447)
.+
T Consensus 94 ~l 95 (301)
T 3dxq_A 94 TM 95 (301)
T ss_dssp EC
T ss_pred cC
Confidence 43
No 432
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=96.79 E-value=0.0027 Score=62.81 Aligned_cols=71 Identities=18% Similarity=0.260 Sum_probs=47.5
Q ss_pred CccccCCCceEEEEEeCC--------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCceEEEe
Q 013258 301 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~ 371 (447)
+.|+.|-...+|+....+ ++.+.+|+.... .....+.+|..++..+...++ .++++.+.. .+|+
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~---~~~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~ 151 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNP---ETESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLE 151 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSC---CCHHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEE
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCC---CcHHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEE
Confidence 457778888999998653 478888887331 111356678888887753344 566765542 3899
Q ss_pred ecCCCCC
Q 013258 372 PYMTNGS 378 (447)
Q Consensus 372 e~~~~gs 378 (447)
||++|..
T Consensus 152 e~l~G~~ 158 (429)
T 1nw1_A 152 EYIPSRP 158 (429)
T ss_dssp CCCCEEE
T ss_pred EEeCCcc
Confidence 9998643
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=96.64 E-value=0.0068 Score=58.75 Aligned_cols=138 Identities=13% Similarity=0.142 Sum_probs=77.2
Q ss_pred CccccCCCceEEEEEeC--------CCcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCceEEEe
Q 013258 301 NILGRGGFGKVYKGRLA--------DGKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~--------~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 371 (447)
+.+..|-...+|+.... +++.+.+|+.... ........+|.++++.+.-.+ ..++++++.. .+||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~--~~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~ 129 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAI--LQGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLE 129 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC-----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCc--cchHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEE
Confidence 45666778889998864 2478889886332 123345678999888774323 3566666543 3999
Q ss_pred ecCCCCChhh--------------H---hhccCCC-CCCCC--hHHHHHHHHHHHH-------------------HHhhh
Q 013258 372 PYMTNGSVAS--------------R---LRERQSS-LPPLD--WPTRKKIALGSAR-------------------GLSYL 412 (447)
Q Consensus 372 e~~~~gsL~~--------------~---l~~~~~~-~~~l~--~~~~~~i~~~ia~-------------------gL~yL 412 (447)
||++|..+.. . |+..... ..... |.+..++..++.. .+++|
T Consensus 130 e~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L 209 (379)
T 3feg_A 130 QYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNL 209 (379)
T ss_dssp ECCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHH
T ss_pred EEecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHH
Confidence 9998755431 1 1111100 11112 3344444433322 12222
Q ss_pred h----c-CCCCCeeecCCCCCceeeCCC----Cceeecccc
Q 013258 413 H----E-HCDPKIIHRDVKAANILLDED----ADQSSKTIL 444 (447)
Q Consensus 413 H----~-~~~~~ivHrDlkp~NILl~~~----~~~~i~df~ 444 (447)
. . .....++|+|+.+.|||++++ +.+.+.||.
T Consensus 210 ~~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE 250 (379)
T 3feg_A 210 RKLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFE 250 (379)
T ss_dssp HHHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCT
T ss_pred HHHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecc
Confidence 2 1 123368999999999999887 678999985
No 434
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.42 E-value=0.017 Score=57.49 Aligned_cols=73 Identities=15% Similarity=0.172 Sum_probs=46.3
Q ss_pred CccccCCCceEEEEEeCC-CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCCc-cceeeEEecCCceEEEeecCCCCC
Q 013258 301 NILGRGGFGKVYKGRLAD-GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRNL-LRLYGFCTTVTEKLLVYPYMTNGS 378 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~ni-v~l~~~~~~~~~~~lv~e~~~~gs 378 (447)
+.|+.|-...+|+....+ +..+.+|+...... ....-.+|..++..+...++ .++++++. + .+||||++|..
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~--~~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~ 187 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTD--EIINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYA 187 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CC--SCSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEE
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChh--hhcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCcc
Confidence 557778888999998765 47788887643221 11122578888888865555 56777663 2 35999998744
Q ss_pred h
Q 013258 379 V 379 (447)
Q Consensus 379 L 379 (447)
+
T Consensus 188 l 188 (458)
T 2qg7_A 188 L 188 (458)
T ss_dssp C
T ss_pred C
Confidence 3
No 435
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.39 E-value=0.0011 Score=57.82 Aligned_cols=90 Identities=13% Similarity=0.137 Sum_probs=65.2
Q ss_pred cccccCCCCCCEEECCCC-ccCC----CCChhhcCCCCCcEEEccCCccccc----CCccccCCCCCCeeeCcCcccccc
Q 013258 84 APELGQLKNLELLELYGN-NLSG----HIPSALGNLIKLKSLDLYSNLFNGT----IPDTLANLKQLKYLRLNNNSLSGL 154 (447)
Q Consensus 84 ~~~l~~l~~L~~L~L~~N-~l~~----~~p~~~~~l~~L~~L~ls~N~l~g~----~p~~~~~l~~L~~L~l~~N~l~~~ 154 (447)
..-+.+-+.|+.|+|++| .+.. .+-..+..-+.|+.|+|++|++... +-+.+..-++|++|+|++|.+...
T Consensus 34 ~~ll~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~ 113 (197)
T 1pgv_A 34 NRLREDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPE 113 (197)
T ss_dssp HHHHTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHH
T ss_pred HHHHhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHH
Confidence 334566788999999986 7763 2455677778999999999999632 344555668999999999999743
Q ss_pred Cch----HHhhcccccccccccc
Q 013258 155 IPT----SLTTITSLNILDLSNN 173 (447)
Q Consensus 155 ~p~----~~~~l~~L~~l~ls~N 173 (447)
--. ++..-+.|+.|++++|
T Consensus 114 Ga~ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 114 LLARLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHHHHhhCCceeEEECCCC
Confidence 222 3333456999999865
No 436
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.30 E-value=0.0074 Score=58.22 Aligned_cols=72 Identities=7% Similarity=0.029 Sum_probs=42.3
Q ss_pred CccccCCCceEEEEEeCC---------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCceEEE
Q 013258 301 NILGRGGFGKVYKGRLAD---------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLV 370 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~---------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv 370 (447)
+.++.|....+|+....+ ++.+.+|+....... ..+...|.+++..+...+ ..++++.. .-++|
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~--~~~~~~E~~~l~~L~~~g~~P~~~~~~----~~~~v 112 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE--LYNTISEFEVYKTMSKYKIAPQLLNTF----NGGRI 112 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG--TSCHHHHHHHHHHHHHTTSSCCEEEEE----TTEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc--eecHHHHHHHHHHHHhcCCCCceEEec----CCcEE
Confidence 456778888999988654 267888876543211 112356777777764333 34666543 23789
Q ss_pred eecCCCCC
Q 013258 371 YPYMTNGS 378 (447)
Q Consensus 371 ~e~~~~gs 378 (447)
|||++|..
T Consensus 113 ~e~i~G~~ 120 (369)
T 3c5i_A 113 EEWLYGDP 120 (369)
T ss_dssp EECCCSEE
T ss_pred EEEecCCc
Confidence 99998754
No 437
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=95.86 E-value=0.016 Score=55.93 Aligned_cols=85 Identities=18% Similarity=0.224 Sum_probs=45.2
Q ss_pred cccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccc
Q 013258 86 ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 165 (447)
Q Consensus 86 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 165 (447)
.+.++..|+.+.+..+ ++..-...|.++.+|+.+.+..+ +...-...|.++++|+.+++.++.++..-..+|.++.+|
T Consensus 235 ~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L 312 (379)
T 4h09_A 235 AFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKL 312 (379)
T ss_dssp TTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTC
T ss_pred cccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCC
Confidence 3455666666666544 33333345555666666666443 322223345556666666666555554445556666666
Q ss_pred ccccccc
Q 013258 166 NILDLSN 172 (447)
Q Consensus 166 ~~l~ls~ 172 (447)
+.+++..
T Consensus 313 ~~i~lp~ 319 (379)
T 4h09_A 313 SSVTLPT 319 (379)
T ss_dssp CEEECCT
T ss_pred CEEEcCc
Confidence 6665543
No 438
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.73 E-value=0.025 Score=54.99 Aligned_cols=82 Identities=20% Similarity=0.327 Sum_probs=34.1
Q ss_pred CCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccccc
Q 013258 89 QLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLNIL 168 (447)
Q Consensus 89 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~~l 168 (447)
++.+|+.+.+. +.++..-...|.++.+|+.++|..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++++|+.+
T Consensus 286 ~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i 362 (394)
T 4gt6_A 286 NCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNI 362 (394)
T ss_dssp TCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEE
T ss_pred cccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEE
Confidence 34444444442 2233222334444455555555433 22122234444555555555332 332223444445555555
Q ss_pred ccccc
Q 013258 169 DLSNN 173 (447)
Q Consensus 169 ~ls~N 173 (447)
++++|
T Consensus 363 ~~~~~ 367 (394)
T 4gt6_A 363 EYSGS 367 (394)
T ss_dssp EESSC
T ss_pred EECCc
Confidence 44444
No 439
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=95.55 E-value=0.08 Score=50.29 Aligned_cols=27 Identities=19% Similarity=0.217 Sum_probs=24.4
Q ss_pred CCeeecCCCCCceeeCCCCceeecccc
Q 013258 418 PKIIHRDVKAANILLDEDADQSSKTIL 444 (447)
Q Consensus 418 ~~ivHrDlkp~NILl~~~~~~~i~df~ 444 (447)
..++|+|+.+.||++++++.+.+.||.
T Consensus 206 ~~~~HgD~~~~N~l~~~~~~~~~iD~e 232 (339)
T 3i1a_A 206 YVLCHSDIHAGNVLVGNEESIYIIDWD 232 (339)
T ss_dssp CEEECSCCCGGGEEECGGGCEEECCCS
T ss_pred ceeEeCCCCcCCEEEeCCCeEEEEECC
Confidence 479999999999999988889999985
No 440
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=95.18 E-value=0.026 Score=54.87 Aligned_cols=87 Identities=10% Similarity=0.170 Sum_probs=58.7
Q ss_pred ccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccc
Q 013258 85 PELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITS 164 (447)
Q Consensus 85 ~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~ 164 (447)
..+.++.+|+.+.|..+ ++..-..+|.++.+|+.+.+..+ ++..-..+|.++++|+.+++.+|.... ..+....+
T Consensus 305 ~aF~~c~~L~~i~lp~~-v~~I~~~aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~---~~~~~~~~ 379 (394)
T 4gt6_A 305 SVFAGCISLKSIDIPEG-ITQILDDAFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW---NAISTDSG 379 (394)
T ss_dssp TTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH---HTCBCCCC
T ss_pred eeecCCCCcCEEEeCCc-ccEehHhHhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh---hhhhccCC
Confidence 45678999999999765 66445678999999999999866 553335689999999999999886542 34556677
Q ss_pred cccccccccccc
Q 013258 165 LNILDLSNNRLS 176 (447)
Q Consensus 165 L~~l~ls~N~l~ 176 (447)
|+.+.+..|.+.
T Consensus 380 L~~i~i~~~~~~ 391 (394)
T 4gt6_A 380 LQNLPVAPGSID 391 (394)
T ss_dssp C-----------
T ss_pred CCEEEeCCCCEE
Confidence 888877666543
No 441
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.93 E-value=0.025 Score=55.01 Aligned_cols=82 Identities=11% Similarity=0.044 Sum_probs=38.3
Q ss_pred ccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccc
Q 013258 87 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 166 (447)
Q Consensus 87 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 166 (447)
+..+..++.+.+..+.+. ...+..+.+|+.+.+.++ +...-..+|.++++|+.++|.++ ++..-..+|.++++|+
T Consensus 272 F~~~~~l~~~~~~~~~i~---~~~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~ 346 (394)
T 4fs7_A 272 FYNCSGLKKVIYGSVIVP---EKTFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLS 346 (394)
T ss_dssp TTTCTTCCEEEECSSEEC---TTTTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCC
T ss_pred cccccccceeccCceeec---cccccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCC
Confidence 344555555555443321 123445555555555443 33222334555555555555433 3333344555555555
Q ss_pred ccccccc
Q 013258 167 ILDLSNN 173 (447)
Q Consensus 167 ~l~ls~N 173 (447)
.+++..|
T Consensus 347 ~i~lp~~ 353 (394)
T 4fs7_A 347 NINFPLS 353 (394)
T ss_dssp EECCCTT
T ss_pred EEEECcc
Confidence 5555443
No 442
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=94.81 E-value=0.033 Score=54.14 Aligned_cols=85 Identities=13% Similarity=0.090 Sum_probs=67.2
Q ss_pred cccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhcccc
Q 013258 86 ELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSL 165 (447)
Q Consensus 86 ~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L 165 (447)
.+..+.+|+.+.+..+ ++..-..+|.++++|+.+++.++ ++-.-..+|.++++|+.+++..| ++..-..+|.++++|
T Consensus 292 ~F~~~~~L~~i~l~~~-i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L 368 (394)
T 4fs7_A 292 TFYGCSSLTEVKLLDS-VKFIGEEAFESCTSLVSIDLPYL-VEEIGKRSFRGCTSLSNINFPLS-LRKIGANAFQGCINL 368 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCEECCCTT-CCEECTTTBTTCTTC
T ss_pred cccccccccccccccc-cceechhhhcCCCCCCEEEeCCc-ccEEhHHhccCCCCCCEEEECcc-ccEehHHHhhCCCCC
Confidence 4667899999999765 66445667899999999999765 65344568899999999999877 665566789999999
Q ss_pred cccccccc
Q 013258 166 NILDLSNN 173 (447)
Q Consensus 166 ~~l~ls~N 173 (447)
+.+++..+
T Consensus 369 ~~i~lp~~ 376 (394)
T 4fs7_A 369 KKVELPKR 376 (394)
T ss_dssp CEEEEEGG
T ss_pred CEEEECCC
Confidence 99988765
No 443
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=94.65 E-value=0.09 Score=51.13 Aligned_cols=27 Identities=26% Similarity=0.202 Sum_probs=23.8
Q ss_pred CCeeecCCCCCceeeCCC------Cceeecccc
Q 013258 418 PKIIHRDVKAANILLDED------ADQSSKTIL 444 (447)
Q Consensus 418 ~~ivHrDlkp~NILl~~~------~~~~i~df~ 444 (447)
..++|+|+.+.|||++++ +.+.+.||.
T Consensus 244 ~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E 276 (401)
T 3f2s_A 244 VVFCHNDCQEGNILLLEGRENSEKQKLMLIDFE 276 (401)
T ss_dssp EEEECSCCCGGGEEEETTGGGCSSSCEEECCCT
T ss_pred eeEEeccCCcccEEEcCCcccCcccceEEEeec
Confidence 368999999999999887 788999985
No 444
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=94.48 E-value=0.16 Score=48.80 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=41.7
Q ss_pred ccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCcccccCCccccCCCCCCeeeCcCccccccCchHHhhccccc
Q 013258 87 LGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNLFNGTIPDTLANLKQLKYLRLNNNSLSGLIPTSLTTITSLN 166 (447)
Q Consensus 87 l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~g~~p~~~~~l~~L~~L~l~~N~l~~~~p~~~~~l~~L~ 166 (447)
+.++.+|+.+.+..+ +...-...|.++++|+.+.+.++.++..-..+|.++.+|+.++|.++ ++..-..+|.++++|+
T Consensus 259 F~~~~~l~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~ 336 (379)
T 4h09_A 259 LQNCTALKTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALS 336 (379)
T ss_dssp TTTCTTCCEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCC
T ss_pred cceeehhcccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCC
Confidence 444555666555432 33222334555666666666555554333345555666666666433 3333344555555555
Q ss_pred cccc
Q 013258 167 ILDL 170 (447)
Q Consensus 167 ~l~l 170 (447)
.+.+
T Consensus 337 ~i~i 340 (379)
T 4h09_A 337 TISY 340 (379)
T ss_dssp CCCC
T ss_pred EEEE
Confidence 5544
No 445
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=93.86 E-value=0.05 Score=34.43 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=19.2
Q ss_pred CCcccchhhhhhHHHHHhhhhhhheeehhcCC
Q 013258 231 SNAAIPVGVALGAALLFAVPVIGFAYWRRTRP 262 (447)
Q Consensus 231 ~~~~i~i~v~~g~~~lv~~~vi~~~~~~~~~~ 262 (447)
....|+.+++.|.+.++++.+..++++|||+.
T Consensus 9 ~~~~IA~gVVgGv~~~~ii~~~~~~~~RRr~~ 40 (44)
T 2ks1_B 9 KIPSIATGMVGALLLLLVVALGIGLFMRRRHI 40 (44)
T ss_dssp CSSSSTHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CcceEEeehhHHHHHHHHHHHHHHHHhhhhHh
Confidence 34456667776666665555555666666554
No 446
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=92.98 E-value=0.05 Score=34.31 Aligned_cols=33 Identities=27% Similarity=0.263 Sum_probs=19.5
Q ss_pred CCcccchhhhhhHHHHHhhhhhhheeehhcCCC
Q 013258 231 SNAAIPVGVALGAALLFAVPVIGFAYWRRTRPH 263 (447)
Q Consensus 231 ~~~~i~i~v~~g~~~lv~~~vi~~~~~~~~~~~ 263 (447)
....|+.+++.|.+.++++....++++|||+.+
T Consensus 8 ~~~aIA~gVVgGv~~v~ii~~~~~~~~RRRr~~ 40 (44)
T 2l2t_A 8 RTPLIAAGVIGGLFILVIVGLTFAVYVRRKSIK 40 (44)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSS
T ss_pred CcceEEEeehHHHHHHHHHHHHHHHHhhhhhhh
Confidence 345566666666666655555556666665543
No 447
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=91.94 E-value=0.35 Score=47.36 Aligned_cols=73 Identities=4% Similarity=0.017 Sum_probs=46.0
Q ss_pred CccccCCCceEEEEEeCC--------CcEEEEEEcccccccccHHHHHHHHHHHhcCCCCC-ccceeeEEecCCceEEEe
Q 013258 301 NILGRGGFGKVYKGRLAD--------GKLVAVKRLKEERTSGGELQFQTEVKIISMAVHRN-LLRLYGFCTTVTEKLLVY 371 (447)
Q Consensus 301 ~~lg~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~H~n-iv~l~~~~~~~~~~~lv~ 371 (447)
+.+..|-...+|+....+ ++.+.+|+...... ...+..+|.++++.+.-.+ ..++++.+. -++|+
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~--~~idR~~E~~~l~~L~~~gi~P~l~~~~~----~~~I~ 149 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVG--KFYDSKVELDVFRYLSNINIAPNIIADFP----EGRIE 149 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC---CCCCHHHHHHHHHHHHHTTSSCCEEEEET----TEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcc--hhcCHHHHHHHHHHHHhcCCCCCEEEEcC----CCEEE
Confidence 456667788899988753 57888888643321 1112457788777764323 345555332 37899
Q ss_pred ecCCCCCh
Q 013258 372 PYMTNGSV 379 (447)
Q Consensus 372 e~~~~gsL 379 (447)
||++|..|
T Consensus 150 efI~G~~l 157 (424)
T 3mes_A 150 EFIDGEPL 157 (424)
T ss_dssp ECCCSEEC
T ss_pred EEeCCccC
Confidence 99998653
No 448
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=90.70 E-value=0.038 Score=55.06 Aligned_cols=61 Identities=7% Similarity=0.009 Sum_probs=17.9
Q ss_pred CCccccCCCceEEEEEeCC-CcEEEE------EEccccccc-ccHHHHHHHHHHHhcCCCCCccceeeEEec
Q 013258 300 KNILGRGGFGKVYKGRLAD-GKLVAV------KRLKEERTS-GGELQFQTEVKIISMAVHRNLLRLYGFCTT 363 (447)
Q Consensus 300 ~~~lg~G~~g~Vy~~~~~~-~~~vav------K~~~~~~~~-~~~~~~~~E~~~l~~l~H~niv~l~~~~~~ 363 (447)
.+.+| ||+||+|.+.. ..+||| |..+..... .....|.+|..++...+|||+++.+++...
T Consensus 147 ~~~lG---fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~~ 215 (463)
T 3cxl_A 147 YEHVG---YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKVH 215 (463)
T ss_dssp TTTSS---BCCC---------CCBGGGC-----------------------------------CBCCCEEEE
T ss_pred cccCC---chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEEe
Confidence 45666 99999999754 467888 766543322 223358889999999999999999988653
No 449
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=88.87 E-value=1.3 Score=38.79 Aligned_cols=81 Identities=7% Similarity=0.012 Sum_probs=58.4
Q ss_pred CCCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHhhhhcCCCCCeeecCCCCC
Q 013258 349 AVHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLSYLHEHCDPKIIHRDVKAA 428 (447)
Q Consensus 349 l~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~yLH~~~~~~ivHrDlkp~ 428 (447)
..||+.+.. .+-.+.+...+.|+.-+.+-=+..++. .+...+++++..++.--+++++. +|--+.|+
T Consensus 42 ~~~~~Fl~~-~I~e~eD~v~~~y~~~~~~~~f~~ik~-------~~~~eKlr~l~ni~~l~~~~~~r-----~tf~L~P~ 108 (215)
T 4ann_A 42 QHSPYFIDA-ELTELRDSFQIHYDINDNHTPFDNIKS-------FTKNEKLRYLLNIKNLEEVNRTR-----YTFVLAPD 108 (215)
T ss_dssp SCCTTBCCE-EEEECSSEEEEEECCCTTSEEGGGGGG-------SCHHHHHHHHHHGGGGGGGGGSS-----EECCCSGG
T ss_pred ccCCcccce-EEEEcccEEEEEEEcCcccCCHHHHHh-------cCHHHHHHHHHHHHHHHHHhcCc-----eEEEEecc
Confidence 368888866 455556666666654433222222332 66788999999999888888765 78899999
Q ss_pred ceeeCCCCceeecc
Q 013258 429 NILLDEDADQSSKT 442 (447)
Q Consensus 429 NILl~~~~~~~i~d 442 (447)
||.+|.++.|++..
T Consensus 109 NL~f~~~~~p~i~~ 122 (215)
T 4ann_A 109 ELFFTRDGLPIAKT 122 (215)
T ss_dssp GEEECTTSCEEESC
T ss_pred eEEEcCCCCEEEEE
Confidence 99999999999875
No 450
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=87.51 E-value=2.3 Score=37.32 Aligned_cols=79 Identities=10% Similarity=0.016 Sum_probs=57.9
Q ss_pred CCCCccceeeEEecCCceEEEeecCCCCChhhHhhccCCCCCCCChHHHHHHHHHHHHHHh-hhhcCCCCCeeecCCCCC
Q 013258 350 VHRNLLRLYGFCTTVTEKLLVYPYMTNGSVASRLRERQSSLPPLDWPTRKKIALGSARGLS-YLHEHCDPKIIHRDVKAA 428 (447)
Q Consensus 350 ~H~niv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~l~~~~~~~i~~~ia~gL~-yLH~~~~~~ivHrDlkp~ 428 (447)
.||++ -...-.+.+...+.|+.-+++-=+..++. ++...+++++..++.-.. ++++. +|--+.|+
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~~-------~~~~eKlrll~nl~~L~~~~~~~r-----~tf~l~P~ 113 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIRK-------TTLLSRIRAAIHLVSKVKHHSARR-----LIFIVCPE 113 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHHT-------SCHHHHHHHHHHHHHHHSSCCSSS-----EECCCCGG
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHHh-------cCHHHHHHHHHHHHHHHHHhhhCc-----eeEEEeCc
Confidence 58887 33344566777777765544443444432 677889999999988888 77765 78889999
Q ss_pred ceeeCCCCceeecc
Q 013258 429 NILLDEDADQSSKT 442 (447)
Q Consensus 429 NILl~~~~~~~i~d 442 (447)
||.+|.++.|++..
T Consensus 114 NL~f~~~~~p~i~h 127 (219)
T 4ano_A 114 NLMFNRALEPFFLH 127 (219)
T ss_dssp GEEECTTCCEEESC
T ss_pred eEEEeCCCcEEEEE
Confidence 99999999999874
No 451
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=83.71 E-value=0.34 Score=47.02 Aligned_cols=25 Identities=28% Similarity=0.329 Sum_probs=20.9
Q ss_pred eeecCCCCCceee------CCCCceeecccc
Q 013258 420 IIHRDVKAANILL------DEDADQSSKTIL 444 (447)
Q Consensus 420 ivHrDlkp~NILl------~~~~~~~i~df~ 444 (447)
++|+|+.+.|||+ +++..+.+.||.
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwE 276 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFE 276 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCT
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechH
Confidence 5799999999999 445678899985
No 452
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=81.17 E-value=0.94 Score=28.05 Aligned_cols=28 Identities=39% Similarity=0.600 Sum_probs=13.0
Q ss_pred cccchhhhhhHHHHHhhhhhhheeehhc
Q 013258 233 AAIPVGVALGAALLFAVPVIGFAYWRRT 260 (447)
Q Consensus 233 ~~i~i~v~~g~~~lv~~~vi~~~~~~~~ 260 (447)
..++.+++.|.++++++....++++|||
T Consensus 13 ~~I~~~vv~Gv~ll~~iv~~~~~~~rRr 40 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLLVLAGVGFFIHRRR 40 (41)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHSSSSSC
T ss_pred EEEEeehhHHHHHHHHHHHHheeEeeec
Confidence 4445555555554332334444555543
No 453
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.64 E-value=0.73 Score=28.96 Aligned_cols=26 Identities=15% Similarity=0.236 Sum_probs=11.6
Q ss_pred hhhhhhHHHHHhhhhhhheeehhcCC
Q 013258 237 VGVALGAALLFAVPVIGFAYWRRTRP 262 (447)
Q Consensus 237 i~v~~g~~~lv~~~vi~~~~~~~~~~ 262 (447)
++.++|.++++.+.+..++++|||+.
T Consensus 15 a~~vVGvll~vi~~l~~~~~~RRR~~ 40 (44)
T 2jwa_A 15 ISAVVGILLVVVLGVVFGILIKRRQQ 40 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHHHHHhheehhhh
Confidence 44444444444444444445555443
No 454
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=65.55 E-value=3.3 Score=25.11 Aligned_cols=11 Identities=36% Similarity=0.347 Sum_probs=5.1
Q ss_pred cchhhhhhHHH
Q 013258 235 IPVGVALGAAL 245 (447)
Q Consensus 235 i~i~v~~g~~~ 245 (447)
.+.+++++.++
T Consensus 12 aIAGiVvG~v~ 22 (38)
T 2k1k_A 12 EIVAVIFGLLL 22 (38)
T ss_dssp HHHHHHHHHHH
T ss_pred ceeeeehHHHH
Confidence 33555555443
No 455
>1iij_A ERBB-2 receptor protein-tyrosine kinase; alpha-helix-PI-bulge-alpha-helix, signaling protein; NMR {Synthetic} SCOP: j.35.1.1
Probab=45.96 E-value=7.9 Score=22.92 Aligned_cols=14 Identities=14% Similarity=0.093 Sum_probs=6.1
Q ss_pred Hhhhhhhheeehhc
Q 013258 247 FAVPVIGFAYWRRT 260 (447)
Q Consensus 247 v~~~vi~~~~~~~~ 260 (447)
+.+.+...+++|||
T Consensus 21 vii~l~~~~~iRRr 34 (35)
T 1iij_A 21 LILVVVVGILIKRR 34 (35)
T ss_dssp HHHTTTTTHHHHHC
T ss_pred HHHHHHhheEEeec
Confidence 33333444455554
No 456
>2l9u_A Receptor tyrosine-protein kinase ERBB-3; transmenbrane dimer, membrane protein, EGFR; NMR {Homo sapiens}
Probab=36.50 E-value=6.8 Score=22.80 Aligned_cols=27 Identities=30% Similarity=0.589 Sum_probs=15.4
Q ss_pred cchhhhhhHHHHHhhhhhhheeehhcC
Q 013258 235 IPVGVALGAALLFAVPVIGFAYWRRTR 261 (447)
Q Consensus 235 i~i~v~~g~~~lv~~~vi~~~~~~~~~ 261 (447)
+...+++|.++++..+-..|.+||-||
T Consensus 8 malt~i~gl~vif~~lg~tflywrgrr 34 (40)
T 2l9u_A 8 MALTVIAGLVVIFMMLGGTFLYWRGRR 34 (40)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCceeEEEcccc
Confidence 334455555555555555577777654
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=34.69 E-value=20 Score=24.44 Aligned_cols=7 Identities=29% Similarity=0.292 Sum_probs=2.8
Q ss_pred eehhcCC
Q 013258 256 YWRRTRP 262 (447)
Q Consensus 256 ~~~~~~~ 262 (447)
+|+|+++
T Consensus 34 crhRrrq 40 (70)
T 2klu_A 34 SRHRRRQ 40 (70)
T ss_dssp SSCCSSS
T ss_pred HHHHHHH
Confidence 3444433
No 458
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=24.89 E-value=79 Score=23.41 Aligned_cols=14 Identities=0% Similarity=0.121 Sum_probs=5.9
Q ss_pred hhcCCCCCcEEEcc
Q 013258 110 ALGNLIKLKSLDLY 123 (447)
Q Consensus 110 ~~~~l~~L~~L~ls 123 (447)
.|.++++|+.+.+.
T Consensus 15 aF~~c~~L~~i~iP 28 (100)
T 2lz0_A 15 LFAGNTVIREITVQ 28 (100)
T ss_dssp TTTTCTTCCCEEEC
T ss_pred HhcCCCCCcEEEcC
Confidence 34444444444443
No 459
>3ox7_P MH027; urokinase-type plasminogen activator, peptidyl inhibitor, pharmacophore, hydrolase, hydrolase-hydrolase inhibitor COM; HET: PG4; 1.58A {Homo sapiens} PDB: 3oy5_P 3oy6_P
Probab=22.10 E-value=21 Score=18.03 Aligned_cols=9 Identities=22% Similarity=0.907 Sum_probs=6.9
Q ss_pred CCCccceeE
Q 013258 54 NLCTWFHIT 62 (447)
Q Consensus 54 ~~c~w~gv~ 62 (447)
.-|+|.|+.
T Consensus 6 gacswrgle 14 (23)
T 3ox7_P 6 GACSWRGLE 14 (26)
T ss_pred cccccccch
Confidence 469999874
No 460
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=21.72 E-value=1.9e+02 Score=21.25 Aligned_cols=42 Identities=10% Similarity=-0.002 Sum_probs=31.5
Q ss_pred cccccCCCCCCEEECCCCccCCCCChhhcCCCCCcEEEccCCc
Q 013258 84 APELGQLKNLELLELYGNNLSGHIPSALGNLIKLKSLDLYSNL 126 (447)
Q Consensus 84 ~~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 126 (447)
...|.++++|+.+.+..+ ++..-...|.++.+|+.+.+....
T Consensus 13 ~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 13 KSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp SCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred HHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 345778999999988654 554556678899999998887653
Done!