Query 013262
Match_columns 447
No_of_seqs 484 out of 2765
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 07:16:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3org_A CMCLC; transporter, tra 100.0 2.3E-49 7.8E-54 425.9 18.1 313 101-432 297-625 (632)
2 1ots_A Voltage-gated CLC-type 100.0 5.8E-29 2E-33 257.7 15.3 162 32-237 287-452 (465)
3 4ene_A CLC-EC1, H(+)/CL(-) exc 100.0 3E-28 1E-32 250.9 15.5 134 99-236 299-436 (446)
4 3nd0_A SLL0855 protein; CLC fa 100.0 6.6E-28 2.3E-32 249.2 17.0 135 99-237 306-444 (466)
5 2d4z_A Chloride channel protei 99.9 2E-21 6.8E-26 185.2 16.7 174 240-431 1-245 (250)
6 4esy_A CBS domain containing m 99.8 3.6E-20 1.2E-24 165.9 8.9 149 250-433 15-163 (170)
7 3k6e_A CBS domain protein; str 99.8 1.4E-18 4.6E-23 153.9 12.8 132 253-436 15-146 (156)
8 3i8n_A Uncharacterized protein 99.8 2E-18 6.9E-23 147.4 12.3 126 250-431 3-128 (130)
9 3lv9_A Putative transporter; C 99.8 9.4E-18 3.2E-22 146.3 15.7 127 250-433 20-146 (148)
10 3hf7_A Uncharacterized CBS-dom 99.8 2E-18 6.9E-23 147.6 11.0 128 252-433 1-128 (130)
11 3kpb_A Uncharacterized protein 99.8 5.2E-18 1.8E-22 142.5 13.3 120 253-432 1-120 (122)
12 2ef7_A Hypothetical protein ST 99.8 1.4E-17 4.9E-22 142.1 15.0 126 251-434 2-127 (133)
13 3lhh_A CBS domain protein; str 99.8 1.1E-17 3.9E-22 150.0 14.9 130 250-436 39-168 (172)
14 3oco_A Hemolysin-like protein 99.7 6.7E-18 2.3E-22 148.3 11.1 131 250-437 17-148 (153)
15 3jtf_A Magnesium and cobalt ef 99.7 6.3E-18 2.1E-22 144.2 10.5 125 251-433 3-127 (129)
16 3lfr_A Putative metal ION tran 99.7 3.7E-18 1.3E-22 147.1 9.1 130 252-436 2-131 (136)
17 2yzi_A Hypothetical protein PH 99.7 2.5E-17 8.5E-22 141.6 14.0 130 250-437 4-134 (138)
18 3gby_A Uncharacterized protein 99.7 7.4E-18 2.5E-22 143.3 10.5 125 251-433 3-127 (128)
19 3nqr_A Magnesium and cobalt ef 99.7 3.3E-18 1.1E-22 145.4 8.3 124 252-431 2-125 (127)
20 3fhm_A Uncharacterized protein 99.7 2.9E-17 1E-21 146.1 14.5 137 246-436 17-154 (165)
21 3fv6_A YQZB protein; CBS domai 99.7 3.2E-17 1.1E-21 144.9 14.5 132 249-437 13-149 (159)
22 2rih_A Conserved protein with 99.7 3.6E-17 1.2E-21 141.3 14.3 123 252-432 4-128 (141)
23 2p9m_A Hypothetical protein MJ 99.7 1.7E-17 6E-22 142.4 11.8 128 249-433 4-137 (138)
24 3ocm_A Putative membrane prote 99.7 2.4E-17 8.2E-22 148.4 13.1 132 250-439 33-164 (173)
25 3lqn_A CBS domain protein; csg 99.7 3.3E-17 1.1E-21 143.0 12.2 137 248-435 10-146 (150)
26 1pbj_A Hypothetical protein; s 99.7 5.1E-17 1.7E-21 136.9 12.3 123 253-433 1-123 (125)
27 1o50_A CBS domain-containing p 99.7 7.7E-17 2.6E-21 142.1 13.8 141 249-434 12-155 (157)
28 3k2v_A Putative D-arabinose 5- 99.7 1.4E-17 4.8E-22 145.5 8.9 121 253-428 28-148 (149)
29 4gqw_A CBS domain-containing p 99.7 2.9E-17 9.9E-22 143.0 10.6 142 251-433 3-144 (152)
30 2emq_A Hypothetical conserved 99.7 8E-17 2.7E-21 141.5 13.3 138 249-437 7-144 (157)
31 3sl7_A CBS domain-containing p 99.7 3.3E-17 1.1E-21 147.0 10.3 156 252-436 3-160 (180)
32 3kxr_A Magnesium transporter, 99.7 1.4E-16 4.9E-21 147.3 14.4 127 251-439 52-181 (205)
33 2o16_A Acetoin utilization pro 99.7 9.5E-17 3.3E-21 142.1 12.6 134 251-433 3-136 (160)
34 2j9l_A Chloride channel protei 99.7 1.4E-16 4.8E-21 143.7 13.8 159 248-437 6-170 (185)
35 3ctu_A CBS domain protein; str 99.7 8.2E-17 2.8E-21 141.5 11.9 135 250-436 12-146 (156)
36 2rc3_A CBS domain; in SITU pro 99.7 1.6E-16 5.5E-21 136.1 13.3 124 253-433 6-132 (135)
37 2nyc_A Nuclear protein SNF4; b 99.7 2.1E-16 7.2E-21 136.3 12.9 127 251-432 6-141 (144)
38 2pfi_A Chloride channel protei 99.7 2.7E-16 9.2E-21 138.9 13.8 134 250-434 10-149 (164)
39 3oi8_A Uncharacterized protein 99.7 3.2E-17 1.1E-21 144.6 7.8 121 250-427 35-155 (156)
40 2uv4_A 5'-AMP-activated protei 99.7 1.3E-16 4.5E-21 139.8 11.4 129 247-432 17-151 (152)
41 1y5h_A Hypothetical protein RV 99.7 5.6E-17 1.9E-21 138.5 8.3 126 250-432 5-131 (133)
42 1pvm_A Conserved hypothetical 99.7 3.1E-16 1.1E-20 142.0 13.1 126 252-432 8-133 (184)
43 4fry_A Putative signal-transdu 99.7 3.3E-16 1.1E-20 137.7 11.7 130 253-437 7-140 (157)
44 1yav_A Hypothetical protein BS 99.7 1.7E-16 5.6E-21 140.1 9.5 136 250-436 11-146 (159)
45 3pc3_A CG1753, isoform A; CBS, 99.6 9.8E-16 3.4E-20 161.3 14.3 157 224-434 355-513 (527)
46 3l2b_A Probable manganase-depe 99.6 1.4E-15 4.7E-20 144.1 13.1 163 252-432 6-244 (245)
47 2oux_A Magnesium transporter; 99.6 1.2E-15 4.3E-20 148.2 10.9 127 251-439 135-266 (286)
48 1vr9_A CBS domain protein/ACT 99.6 2E-15 6.7E-20 140.3 11.7 119 253-433 13-131 (213)
49 3ddj_A CBS domain-containing p 99.6 2E-15 6.9E-20 146.5 11.7 136 252-437 155-290 (296)
50 2yvy_A MGTE, Mg2+ transporter 99.6 3.6E-15 1.2E-19 144.2 13.4 127 251-439 133-264 (278)
51 3t4n_C Nuclear protein SNF4; C 99.6 6.8E-15 2.3E-19 144.6 13.7 127 252-433 186-321 (323)
52 2yzq_A Putative uncharacterize 99.6 5.8E-15 2E-19 141.9 9.9 149 252-432 125-279 (282)
53 3kh5_A Protein MJ1225; AMPK, A 99.6 9.8E-15 3.4E-19 139.9 11.1 132 253-430 148-279 (280)
54 3ddj_A CBS domain-containing p 99.5 2.5E-14 8.6E-19 138.8 11.5 122 252-431 92-213 (296)
55 3kh5_A Protein MJ1225; AMPK, A 99.5 8.2E-14 2.8E-18 133.5 14.5 122 252-431 83-204 (280)
56 2zy9_A Mg2+ transporter MGTE; 99.5 6.1E-14 2.1E-18 145.5 14.1 122 251-434 153-279 (473)
57 2qrd_G Protein C1556.08C; AMPK 99.5 7.1E-14 2.4E-18 137.9 13.8 128 252-434 181-317 (334)
58 2yzq_A Putative uncharacterize 99.5 4.5E-14 1.5E-18 135.7 7.7 117 253-431 1-118 (282)
59 2v8q_E 5'-AMP-activated protei 99.5 6.9E-13 2.4E-17 130.7 15.1 147 250-433 32-178 (330)
60 3usb_A Inosine-5'-monophosphat 99.4 6.5E-13 2.2E-17 138.8 12.1 118 254-432 114-234 (511)
61 2v8q_E 5'-AMP-activated protei 99.4 3.8E-13 1.3E-17 132.6 9.0 132 253-433 190-324 (330)
62 3t4n_C Nuclear protein SNF4; C 99.4 1.5E-12 5.2E-17 127.7 13.1 130 254-433 115-249 (323)
63 2qrd_G Protein C1556.08C; AMPK 99.4 1.7E-12 5.8E-17 128.0 13.2 148 250-432 19-172 (334)
64 1zfj_A Inosine monophosphate d 99.4 2.5E-12 8.4E-17 134.2 12.8 118 254-432 91-211 (491)
65 4fxs_A Inosine-5'-monophosphat 99.4 2.9E-13 9.8E-18 141.0 4.7 118 253-431 89-208 (496)
66 4avf_A Inosine-5'-monophosphat 99.3 3.1E-13 1.1E-17 140.5 0.9 117 253-431 88-206 (490)
67 1vrd_A Inosine-5'-monophosphat 99.3 2.4E-13 8.1E-18 142.0 -0.1 177 190-433 32-216 (494)
68 4af0_A Inosine-5'-monophosphat 99.3 6E-13 2.1E-17 136.2 0.7 117 256-431 141-257 (556)
69 1me8_A Inosine-5'-monophosphat 99.2 5.3E-13 1.8E-17 139.4 -0.9 126 251-433 94-222 (503)
70 1jcn_A Inosine monophosphate d 99.2 5.5E-13 1.9E-17 139.9 -4.6 178 193-431 47-232 (514)
71 2cu0_A Inosine-5'-monophosphat 99.1 1.1E-11 3.8E-16 129.0 -0.1 170 193-431 32-207 (486)
72 1ots_A Voltage-gated CLC-type 98.9 1.3E-08 4.5E-13 105.0 13.0 121 100-225 107-232 (465)
73 4ene_A CLC-EC1, H(+)/CL(-) exc 98.8 3E-08 1E-12 101.8 11.6 99 126-225 113-217 (446)
74 3nd0_A SLL0855 protein; CLC fa 98.8 5.2E-08 1.8E-12 100.4 13.0 120 100-225 103-227 (466)
75 3ghd_A A cystathionine beta-sy 98.7 4.1E-08 1.4E-12 74.2 7.4 46 265-322 2-47 (70)
76 1vr9_A CBS domain protein/ACT 98.7 3.3E-08 1.1E-12 91.3 7.2 102 252-408 71-172 (213)
77 3org_A CMCLC; transporter, tra 98.6 1.4E-07 4.9E-12 101.0 10.5 101 125-225 104-211 (632)
78 4esy_A CBS domain containing m 98.5 8E-08 2.7E-12 85.1 6.1 57 368-429 17-73 (170)
79 3ghd_A A cystathionine beta-sy 98.5 2.5E-07 8.7E-12 69.8 7.1 48 379-432 2-49 (70)
80 2d4z_A Chloride channel protei 98.4 5.1E-07 1.8E-11 85.5 8.7 63 368-433 12-74 (250)
81 3fio_A A cystathionine beta-sy 98.4 6.9E-07 2.3E-11 66.6 7.4 48 264-323 1-48 (70)
82 3l2b_A Probable manganase-depe 98.4 6.7E-07 2.3E-11 84.0 7.7 60 369-433 7-66 (245)
83 3lv9_A Putative transporter; C 98.3 1E-06 3.4E-11 75.9 8.0 60 369-433 23-85 (148)
84 3lhh_A CBS domain protein; str 98.3 7.1E-07 2.4E-11 79.2 7.0 60 369-433 42-104 (172)
85 3fio_A A cystathionine beta-sy 98.3 1.1E-06 3.7E-11 65.5 6.7 48 379-432 2-49 (70)
86 3k2v_A Putative D-arabinose 5- 98.3 1.2E-06 4.1E-11 75.5 7.3 59 369-432 28-88 (149)
87 2rih_A Conserved protein with 98.3 1.6E-06 5.5E-11 73.8 7.7 59 369-432 5-65 (141)
88 3kpb_A Uncharacterized protein 98.3 9.3E-07 3.2E-11 73.1 6.0 57 371-432 3-59 (122)
89 2yzi_A Hypothetical protein PH 98.3 2E-06 6.9E-11 72.8 7.8 57 369-430 7-63 (138)
90 2o16_A Acetoin utilization pro 98.3 1.6E-06 5.3E-11 75.9 7.2 59 369-432 5-63 (160)
91 2p9m_A Hypothetical protein MJ 98.2 3E-06 1E-10 71.6 7.5 58 369-431 8-66 (138)
92 1pbj_A Hypothetical protein; s 98.2 2.7E-06 9.3E-11 70.5 6.9 56 371-432 3-58 (125)
93 3fv6_A YQZB protein; CBS domai 98.2 3.7E-06 1.3E-10 73.3 8.0 57 369-431 17-73 (159)
94 3gby_A Uncharacterized protein 98.2 1.9E-06 6.5E-11 72.1 5.4 59 253-324 68-126 (128)
95 3i8n_A Uncharacterized protein 98.1 2E-06 6.7E-11 72.3 5.4 60 369-432 6-67 (130)
96 3nqr_A Magnesium and cobalt ef 98.1 1.1E-06 3.8E-11 73.6 3.5 57 370-431 4-63 (127)
97 3lqn_A CBS domain protein; csg 98.1 2.1E-06 7.3E-11 73.8 5.4 58 369-431 15-74 (150)
98 3hf7_A Uncharacterized CBS-dom 98.1 2.2E-06 7.6E-11 72.2 5.4 58 371-432 4-63 (130)
99 3k6e_A CBS domain protein; str 98.1 3.3E-06 1.1E-10 73.8 6.3 59 251-324 84-142 (156)
100 3jtf_A Magnesium and cobalt ef 98.1 1.6E-06 5.4E-11 72.9 4.1 58 370-431 6-65 (129)
101 3ctu_A CBS domain protein; str 98.1 3.2E-06 1.1E-10 73.2 6.2 58 370-432 16-75 (156)
102 2pfi_A Chloride channel protei 98.1 3.8E-06 1.3E-10 73.1 6.6 61 369-432 13-73 (164)
103 1pvm_A Conserved hypothetical 98.1 6.1E-06 2.1E-10 73.8 8.1 58 369-431 9-66 (184)
104 1yav_A Hypothetical protein BS 98.1 3E-06 1E-10 73.8 5.7 59 369-432 14-74 (159)
105 2ef7_A Hypothetical protein ST 98.1 4.2E-06 1.4E-10 70.3 6.5 60 252-324 66-125 (133)
106 2emq_A Hypothetical conserved 98.1 4.7E-06 1.6E-10 72.1 6.9 58 369-431 11-70 (157)
107 3kxr_A Magnesium transporter, 98.1 6E-06 2.1E-10 75.6 7.8 60 252-324 115-174 (205)
108 2rc3_A CBS domain; in SITU pro 98.1 5.4E-06 1.8E-10 69.9 6.9 60 251-324 72-131 (135)
109 3fhm_A Uncharacterized protein 98.1 3.5E-06 1.2E-10 73.9 5.9 60 369-433 24-86 (165)
110 4gqw_A CBS domain-containing p 98.1 3.8E-06 1.3E-10 71.9 6.0 60 252-324 84-143 (152)
111 2nyc_A Nuclear protein SNF4; b 98.1 8.7E-06 3E-10 69.0 8.2 54 374-432 16-69 (144)
112 3sl7_A CBS domain-containing p 98.1 3.8E-06 1.3E-10 74.3 6.1 60 252-324 97-156 (180)
113 3lfr_A Putative metal ION tran 98.1 2E-06 6.7E-11 73.1 4.0 58 370-431 4-63 (136)
114 3oco_A Hemolysin-like protein 98.1 7.1E-06 2.4E-10 71.0 7.4 59 252-324 85-143 (153)
115 1y5h_A Hypothetical protein RV 98.0 3.4E-06 1.2E-10 70.8 4.9 55 369-428 8-62 (133)
116 3ocm_A Putative membrane prote 98.0 9.6E-06 3.3E-10 72.1 7.9 60 369-432 36-97 (173)
117 1o50_A CBS domain-containing p 98.0 8.4E-06 2.9E-10 70.8 7.3 57 369-431 16-73 (157)
118 3oi8_A Uncharacterized protein 98.0 3.6E-06 1.2E-10 73.2 4.5 59 369-431 38-98 (156)
119 2j9l_A Chloride channel protei 98.0 6.1E-06 2.1E-10 73.3 6.0 59 369-432 11-77 (185)
120 2uv4_A 5'-AMP-activated protei 98.0 1.2E-05 3.9E-10 69.5 6.9 58 252-322 86-149 (152)
121 4fry_A Putative signal-transdu 98.0 9.2E-06 3.1E-10 70.4 6.2 60 251-324 76-135 (157)
122 3pc3_A CG1753, isoform A; CBS, 97.8 2.2E-05 7.4E-10 82.3 7.5 61 368-433 383-445 (527)
123 2yvy_A MGTE, Mg2+ transporter 97.7 3E-05 1E-09 74.3 5.9 60 252-324 198-257 (278)
124 2oux_A Magnesium transporter; 97.7 3.4E-05 1.2E-09 74.2 6.3 60 252-324 200-259 (286)
125 2zy9_A Mg2+ transporter MGTE; 97.6 8.2E-05 2.8E-09 76.8 7.1 60 252-324 218-277 (473)
126 1me8_A Inosine-5'-monophosphat 97.5 2.8E-05 9.6E-10 80.9 2.8 61 252-323 160-220 (503)
127 3usb_A Inosine-5'-monophosphat 97.4 0.00052 1.8E-08 71.4 10.4 61 252-324 174-234 (511)
128 4fxs_A Inosine-5'-monophosphat 97.1 0.00041 1.4E-08 71.9 6.0 52 371-427 91-142 (496)
129 1zfj_A Inosine monophosphate d 96.9 0.0014 4.6E-08 67.9 7.1 53 371-428 92-146 (491)
130 4af0_A Inosine-5'-monophosphat 96.9 0.00017 5.7E-09 74.2 0.0 58 252-322 199-256 (556)
131 2cu0_A Inosine-5'-monophosphat 96.7 0.00024 8.2E-09 73.6 0.2 58 252-322 149-206 (486)
132 1vrd_A Inosine-5'-monophosphat 96.7 0.00025 8.6E-09 73.5 0.2 54 370-428 96-149 (494)
133 4avf_A Inosine-5'-monophosphat 96.7 0.00026 8.9E-09 73.3 0.0 62 252-324 146-207 (490)
134 1jcn_A Inosine monophosphate d 96.1 0.00091 3.1E-08 69.7 -0.2 57 370-429 109-166 (514)
No 1
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=100.00 E-value=2.3e-49 Score=425.92 Aligned_cols=313 Identities=24% Similarity=0.337 Sum_probs=235.4
Q ss_pred hHHHHHHHhcCCCC---CCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccC--CcchHHH
Q 013262 101 NDDAVRNIFSSNTP---TEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYT--NIDQGLY 175 (447)
Q Consensus 101 ~~~~i~~l~~~~~~---~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~--~~~~~~~ 175 (447)
+++.++.+|++.+. +.+.+..|++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++... .++|+.|
T Consensus 297 ~~~~i~~l~~~~~~~~~~~~~~~~l~~~~~~k~~~t~~s~g~g~pGGif~P~l~iGA~~G~~~g~~~~~~~p~~~~p~~~ 376 (632)
T 3org_A 297 PRATINDLFKAVPLYQTDHFGWTELILMPIIKFILVALSIGLPLPAGVFVPSFLIGAGFGRLYGELMRVVFGNAIVPGSY 376 (632)
T ss_dssp CHHHHHHHHSCC----------CCSSHHHHHHHHHHHHHTTSSSBCBCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred HHHHHHHHHcCCccccccchhHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHHHHHHHhCCcccchHHH
Confidence 56778888875432 234566788889999999999999999999999999999999999999987632 2689999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhcCCchHHHHHHhhCCCCCCCCCCcccccccc
Q 013262 176 AVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDAHPEPWMRTLTV 255 (447)
Q Consensus 176 a~~G~aa~~~g~~~~p~s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l~~sIYd~~l~~kg~p~l~~~~~~~l~~l~v 255 (447)
|++||||++||++|+|++++ |++||||++++++|+|+++++|+++++.++++|||.+++.|++|++++......++++|
T Consensus 377 a~vGmaa~~~~v~~ap~t~v-i~~E~tg~~~~~lpl~ia~~~a~~v~~~~~~~iY~~~~~~k~lp~l~~~~~~~~~~~~V 455 (632)
T 3org_A 377 AVVGAAAFTAGVTRALSCAV-IIFEVTGQIRHLVPVLISVLLAVIVGNAFNRSLYETLVLMKHLPYMPILRRDRSPEMTA 455 (632)
T ss_dssp HHHHHHHHHHHHSCCTTHHH-HHHHHTCCCSCSHHHHHHHHHHHHHHHHHCCCHHHHHHHHTTCCEEEEECTTCCTTSBH
T ss_pred HHHHHHHHHHHHHHHHHHHH-HHHHHhCChhHHHHHHHHHHHHHHHHHHhCCCHHHHHHHhcCCCccccccccccccCcH
Confidence 99999999999999999875 89999999999999999999999999999889999999999999987555445578999
Q ss_pred cccccCCCCeeEecCCCCHHHHHHHHh-cCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcccc
Q 013262 256 GELIDAKPPVITLSGIEKVSQIVDVLR-NTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRT 334 (447)
Q Consensus 256 ~diM~~~~~vv~l~~~~tv~~~~~~L~-~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~ 334 (447)
+|+|+++.++++++++++++|+.+.|+ +++++++||||++ ++++|+|+++|+.+.+.++.... ..+.
T Consensus 456 ~diM~p~~~v~~v~~~~t~~e~~~~~~~~~~~~~~PVvd~~-----------~~lvGiVt~~DL~~~l~~~~~~~-~~~~ 523 (632)
T 3org_A 456 REIMHPIEGEPHLFPDSEPQHIKGILEKFPNRLVFPVIDAN-----------GYLLGAISRKEIVDRLQHVLEDV-PEPI 523 (632)
T ss_dssp HHHCBCTTTSCCBCSSSCHHHHHHHHHHSTTCCEECBBCTT-----------CBBCCEESHHHHTTTTTTC---------
T ss_pred HHHhhcCCCceEecCCCcHHHHHHHHHhcCCcceEEEEecC-----------CeEEEEEEHHHHHHHHHHHhhhc-cccc
Confidence 999993338999999999999999999 8999999999987 89999999999987654421000 0000
Q ss_pred hhhhhhhcchHHHHhhhcccc-ccc------ccchhh---hhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEE
Q 013262 335 EEWEVREKFSWVELAEREGKI-EEV------AVTSEE---MEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLL 404 (447)
Q Consensus 335 ~~~~~~~~~~~~d~~~~~~~~-~~~------~l~~~~---~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~Lp 404 (447)
...+........++.+..... ++. ...+.+ .+...+++++|+++|++|++|+++.++.++|.+++.+++|
T Consensus 524 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lp 603 (632)
T 3org_A 524 AGHRTLVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIY 603 (632)
T ss_dssp -----------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEE
T ss_pred ccccceeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEE
Confidence 000000001111111100000 000 000000 0111137899999999999999999999999999999999
Q ss_pred EEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 405 VVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 405 VVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
|+ + +|+++||||++|+++++.+
T Consensus 604 Vv-e-----~G~lvGIVT~~Dll~~~~~ 625 (632)
T 3org_A 604 VT-E-----RGKLVGIVEREDVAYGYSN 625 (632)
T ss_dssp EE-E-----TTEEEEEEEGGGTEECCCC
T ss_pred EE-E-----CCEEEEEEehhhHHHHHhh
Confidence 99 4 4689999999999876554
No 2
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=99.96 E-value=5.8e-29 Score=257.65 Aligned_cols=162 Identities=20% Similarity=0.367 Sum_probs=144.4
Q ss_pred CCcchHHHHHHHHHHHHHhHcchhhhhcCCCCCCCCCCCCCCCCCCCCcccccCCCCCcchhHHhhcCChHHHHHHHhcC
Q 013262 32 GKMHKLLLALSVSVFTSVCQYCLPFLADCKACDPSFPETCPTNGRSGNFKQFNCPNGHYNDLATLLLTTNDDAVRNIFSS 111 (447)
Q Consensus 32 ~~~~~~~e~~~v~~~t~~~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~c~~~~y~~l~~l~~~~~~~~i~~l~~~ 111 (447)
+++++++++++.++++++++++.|.. +++|++.|+.+|+.
T Consensus 287 ~~~~~~~~~~i~gl~~g~l~~~~P~~----------------------------------------lG~G~~~i~~~~~~ 326 (465)
T 1ots_A 287 NITKWVLMGGAIGGLCGLLGFVAPAT----------------------------------------SGGGFNLIPIATAG 326 (465)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCGGG----------------------------------------SSCSTTHHHHHHHT
T ss_pred CchhHHHHHHHHHHHHHHHHHHhHhh----------------------------------------cCChHHHHHHHHcC
Confidence 34567789999999999999886543 23456778888874
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhcc---CCcchHHHHHHHHHHHHHhhh
Q 013262 112 NTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSY---TNIDQGLYAVLGAASLMAGSM 188 (447)
Q Consensus 112 ~~~~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~---~~~~~~~~a~~G~aa~~~g~~ 188 (447)
++++..+++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++.. ...+|+.||++||+|+++|++
T Consensus 327 ----~~~~~~l~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~alvGmaa~~a~v~ 402 (465)
T 1ots_A 327 ----NFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTFAIAGMGALLAASI 402 (465)
T ss_dssp ----CSCHHHHHHHHHHHHHHHHHHHHTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHTHHHHHTS
T ss_pred ----CchHHHHHHHHHHHHHHHHHHHcCCCChhhhHHHHHHHHHHHHHHHHHHHHHCCcccccHHHHHHHHHHHHHHHHH
Confidence 4678889999999999999999999999999999999999999999998753 247899999999999999999
Q ss_pred chhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhc-CCchHHHHHHhh
Q 013262 189 RMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILELK 237 (447)
Q Consensus 189 ~~p~s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l-~~sIYd~~l~~k 237 (447)
|+|+|+++|++|+||++++++|+|+++++|+++++.+ +++|||.+++++
T Consensus 403 raPlt~ivlv~Eltg~~~~llpl~ia~~iA~~v~~~~~~~~iY~~~l~~~ 452 (465)
T 1ots_A 403 RAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILART 452 (465)
T ss_dssp CCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHTTTCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 9999999999999999999999999999999999999 799999999875
No 3
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=99.95 E-value=3e-28 Score=250.89 Aligned_cols=134 Identities=23% Similarity=0.423 Sum_probs=122.8
Q ss_pred CChHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccC---CcchHHH
Q 013262 99 TTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYT---NIDQGLY 175 (447)
Q Consensus 99 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~---~~~~~~~ 175 (447)
++|++.++.+++. ++++..|++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++... ..+|+.|
T Consensus 299 G~G~~~i~~~~~~----~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~ 374 (446)
T 4ene_A 299 GGGFNLIPIATAG----NFSMGMLVFIFVARVITTLLCFSSGAPGGIFAPMLALGTVLGTAFGMVAVELFPQYHLEAGTF 374 (446)
T ss_dssp SCCSTHHHHHHTT----CSCHHHHHHHHHHHHHHHHHHHTTTCSSBSHHHHHHHHHHHHHHHHHHHHHHCGGGTCCHHHH
T ss_pred CCcHHHHHHHHcC----CchHHHHHHHHHHHHHHHHHHHccCCCcchhHHHHHHHHHHHHHHHHHHHHhCCccccCHHHH
Confidence 3456677888863 47788899999999999999999999999999999999999999999987642 4789999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhc-CCchHHHHHHh
Q 013262 176 AVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILEL 236 (447)
Q Consensus 176 a~~G~aa~~~g~~~~p~s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l-~~sIYd~~l~~ 236 (447)
|++||||+++|++|+|+|+++|++|+||++++++|+|+++++|+++++.+ +++|||.++++
T Consensus 375 a~vGmaa~~a~~~~aPlt~~vl~~Eltg~~~~~lpl~ia~~ia~~v~~~~~~~~iY~~~l~r 436 (446)
T 4ene_A 375 AIAGMGALLAASIRAPLTGIILVLEMTDNYQLILPMIITGLGATLLAQFTGGKPLYSAILAR 436 (446)
T ss_dssp HHHHHTHHHHHHTCCHHHHHHHHHHHHCCGGGHHHHHHHHHHHHHHHHHTTCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHHHCChhHHHHHHHHHHHHHHHHHHhCCCChHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 89999998875
No 4
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=99.95 E-value=6.6e-28 Score=249.15 Aligned_cols=135 Identities=22% Similarity=0.397 Sum_probs=125.1
Q ss_pred CChHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccC---CcchHHH
Q 013262 99 TTNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYT---NIDQGLY 175 (447)
Q Consensus 99 ~~~~~~i~~l~~~~~~~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~---~~~~~~~ 175 (447)
++|++.++.+++. ++++..|++++++|+++|++|+|+|+|||+|+|+|++||++|+++|.+++... ..+|+.|
T Consensus 306 G~G~~~i~~~~~~----~~~~~~L~~~~~~K~~~t~lt~gsG~~GGif~Psl~iGA~~G~~~g~~~~~~~p~~~~~~~~~ 381 (466)
T 3nd0_A 306 DGGDNAVLWAFNS----QSHFSTLILVFCGRFLLTLICYGSGAIGGIFAPMLGIASIVSVAMARHFHLLFPSQIPEPAVM 381 (466)
T ss_dssp SSSHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCSHHHHHHHHHHHHHHHHHHHHHHCTTTCSSTHHH
T ss_pred CCcHHHHHHHHcC----CccHHHHHHHHHHHHHHHHHHHhCCCCCceehHHHHHHHHHHHHHHHHHHHhCCccccCHHHH
Confidence 4578889999964 46788899999999999999999999999999999999999999999987632 5789999
Q ss_pred HHHHHHHHHHhhhchhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhc-CCchHHHHHHhh
Q 013262 176 AVLGAASLMAGSMRMTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSF-NPSIYEIILELK 237 (447)
Q Consensus 176 a~~G~aa~~~g~~~~p~s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l-~~sIYd~~l~~k 237 (447)
|++||||+++|++|+|+|+++|++|+||++++++|+|+++++|+++++.+ +++|||.++++.
T Consensus 382 a~vGmaa~~a~v~~aPlt~ivlv~Eltg~~~~~lpl~ia~~iA~~v~~~~~~~~iY~~~l~r~ 444 (466)
T 3nd0_A 382 AIAGMGALVAATVRAPLTAILLTIEMTDNYFVILPLLVTCLVASVVAEALGGKPIYTVLLERT 444 (466)
T ss_dssp HHHTTSHHHHHHHSCHHHHHHHHHHTTCCCTTHHHHHHHHHHHHHHHTTSCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHCChHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 899999999863
No 5
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.87 E-value=2e-21 Score=185.18 Aligned_cols=174 Identities=21% Similarity=0.335 Sum_probs=121.2
Q ss_pred CCCCCCCCcccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHH
Q 013262 240 PFLDAHPEPWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLV 319 (447)
Q Consensus 240 p~l~~~~~~~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~ 319 (447)
|.|.|... ...+++|+|+|++ +++++.+++++.++.++|.++++++|||||++ ++++++|+|+++||+
T Consensus 1 P~L~~~~~-~~~~~~v~diMt~--~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~~---------~~~~LvGiIt~~dl~ 68 (250)
T 2d4z_A 1 PELSWSSA-NKYNIQVGDIMVR--DVTSIASTSTYGDLLHVLRQTKLKFFPFVDTP---------DTNTLLGSIDRTEVE 68 (250)
T ss_dssp --CCCCCC-CCSSCBTTSSSBS--SCCCEETTCBHHHHHHHHHHCCCSEEEEESCT---------TTCBEEEEEEHHHHH
T ss_pred CCCCCCCc-ccCCCChHHhcCC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEecC---------CCCeEEEEEEHHHHH
Confidence 55666555 5678999999999 99999999999999999999999999999974 237899999999999
Q ss_pred HHHHhhhhhhhcc-cc---------h-hh------hhhhcchHHH-----------------------------------
Q 013262 320 LALKKKWFLQEKR-RT---------E-EW------EVREKFSWVE----------------------------------- 347 (447)
Q Consensus 320 ~~L~~~~~~~~~~-~~---------~-~~------~~~~~~~~~d----------------------------------- 347 (447)
.++........+. .. . .+ .....+...+
T Consensus 69 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 148 (250)
T 2d4z_A 69 GLLQRRISAYRRQPAAAAEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQ 148 (250)
T ss_dssp HHHHHHHHTTSSSCCCCCCBCCC---------------------------------------------------------
T ss_pred HHHHHhhhhhhhhhhhhhcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccc
Confidence 8876532111000 00 0 00 0000000000
Q ss_pred ----Hhh------hcccccccccchh--------hhhhccCccc-cccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 348 ----LAE------REGKIEEVAVTSE--------EMEMYIDLHP-LTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 348 ----~~~------~~~~~~~~~l~~~--------~~~~~idl~~-im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
+.. ......++++..+ ..+..+|+++ +|+++|++|.+++||.+|+++|+++|++++||+++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~~ 228 (250)
T 2d4z_A 149 TSGIYQKKQKGTGQVASRFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTSM 228 (250)
T ss_dssp ------------------CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEET
T ss_pred cccccccccccccccCcccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEEC
Confidence 000 0001111222222 2456677775 79999999999999999999999999999999974
Q ss_pred cccCCCCcEEEEEeHHHHHHHHH
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
|+++|||||+||++++.
T Consensus 229 ------GrLVGIVTrkDl~kai~ 245 (250)
T 2d4z_A 229 ------GKLVGVVALAEIQAAIE 245 (250)
T ss_dssp ------TEEEEEEEHHHHHHHHH
T ss_pred ------CEEEEEEEHHHHHHHHH
Confidence 68999999999999875
No 6
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.81 E-value=3.6e-20 Score=165.91 Aligned_cols=149 Identities=19% Similarity=0.290 Sum_probs=112.8
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+++++|+|+|++ +++++++++++.++++.|.+++++++||+|++ |+++|+||.+|+++.+.......
T Consensus 15 l~~~~V~diM~~--~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-----------g~lvGiit~~Dll~~~~~~~~~~ 81 (170)
T 4esy_A 15 IRQVPIRDILTS--PVVTVREDDTLDAVAKTMLEHQIGCAPVVDQN-----------GHLVGIITESDFLRGSIPFWIYE 81 (170)
T ss_dssp HHTSBGGGGCCS--CCCCEETTSBHHHHHHHHHHTTCSEEEEECTT-----------SCEEEEEEGGGGGGGTCCTTHHH
T ss_pred HcCCCHHHhcCC--CCcEECCcCcHHHHHHHHHHcCCeEEEEEcCC-----------ccEEEEEEHHHHHHHHhhccccc
Confidence 567899999999 99999999999999999999999999999987 89999999999976433211100
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
.. ..........+... ..+......++++|+++++++++++++.+|+++|.+.+++++||+|+
T Consensus 82 ~~-----~~~~~~~~~~~~~~-----------~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~- 144 (170)
T 4esy_A 82 AS-----EILSRAIPAPEVEH-----------LFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD- 144 (170)
T ss_dssp HH-----HHHTTTSCHHHHHH-----------HHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-
T ss_pred hh-----hhhhhccchhhHHh-----------hhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC-
Confidence 00 00000000000000 00112345678899999999999999999999999999999999984
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
|+++||||++||++++.++
T Consensus 145 -----g~lvGivt~~Dil~~l~~~ 163 (170)
T 4esy_A 145 -----GVPVGIVTRRDLLKLLLLE 163 (170)
T ss_dssp -----TEEEEEEEHHHHTTTSCCC
T ss_pred -----CEEEEEEEHHHHHHHHHhc
Confidence 6799999999999876543
No 7
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.78 E-value=1.4e-18 Score=153.89 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=109.4
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+++++|.|..+++++++++++.+++++|.+++++++||+|++ ++++|+|+.+|+...+.......
T Consensus 15 ~~~~~iM~P~~~v~~v~~~~t~~~a~~~m~~~~~s~~pVvd~~-----------~~lvGiit~~Di~~~~~~~~~~~--- 80 (156)
T 3k6e_A 15 GQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-----------KQFVGTIGLRDIMAYQMEHDLSQ--- 80 (156)
T ss_dssp TTGGGGEEETTSSCCEETTSBHHHHHHHHTTSSSSEEEEECC------------CBEEEEEEHHHHHHHHHHHTCCH---
T ss_pred ccHHHhCcchhHeEEECCcCCHHHHHHHHHHcCCcEEEEEcCC-----------CcEEEEEEecchhhhhhhccccc---
Confidence 4678999987789999999999999999999999999999886 89999999999987664421110
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
. .....+++++|.++++++++++++.+|+++|.+.+ .+||||+
T Consensus 81 -------------~------------------~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~---- 123 (156)
T 3k6e_A 81 -------------E------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA---- 123 (156)
T ss_dssp -------------H------------------HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECT----
T ss_pred -------------c------------------cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEec----
Confidence 0 01224578899999999999999999999998765 5999997
Q ss_pred CCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 413 GVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 413 g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++.+...+
T Consensus 124 -~g~l~GiiT~~Dil~~~~~~~~~ 146 (156)
T 3k6e_A 124 -EGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp -TSBEEEEEEHHHHHHHHHHHSCC
T ss_pred -CCEEEEEEEHHHHHHHHHHHhcc
Confidence 67899999999999998765443
No 8
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.77 E-value=2e-18 Score=147.36 Aligned_cols=126 Identities=17% Similarity=0.241 Sum_probs=103.4
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+++.+|+|+|++..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|+...+....
T Consensus 3 l~~~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------~~~~~Givt~~dl~~~~~~~~--- 69 (130)
T 3i8n_A 3 AQDVPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSEQ----------KDNIIGFVHRLELFKMQQSGS--- 69 (130)
T ss_dssp ----CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESSS----------TTCEEEECCHHHHHHHHHTTT---
T ss_pred cCcCCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC----------CCcEEEEEEHHHHHHHHhcCC---
Confidence 5678999999964467899999999999999999999999999863 168999999999987654321
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
...+++++| +++.++++++++.+|+++|.+.+.+++||+|+
T Consensus 70 -------------------------------------~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~- 110 (130)
T 3i8n_A 70 -------------------------------------GQKQLGAVM-RPIQVVLNNTALPKVFDQMMTHRLQLALVVDE- 110 (130)
T ss_dssp -------------------------------------TTSBHHHHS-EECCEEETTSCHHHHHHHHHHHTCCEEEEECT-
T ss_pred -------------------------------------CcCCHHHHh-cCCcCcCCCCcHHHHHHHHHHcCCeEEEEEcC-
Confidence 012345567 45789999999999999999999999999987
Q ss_pred ccCCCCcEEEEEeHHHHHHHHH
Q 013262 410 EAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~ 431 (447)
+|+++|+||++|++++..
T Consensus 111 ----~g~~vGivt~~dil~~l~ 128 (130)
T 3i8n_A 111 ----YGTVLGLVTLEDIFEHLV 128 (130)
T ss_dssp ----TSCEEEEEEHHHHHHHHH
T ss_pred ----CCCEEEEEEHHHHHHHHc
Confidence 578999999999999865
No 9
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.76 E-value=9.4e-18 Score=146.33 Aligned_cols=127 Identities=15% Similarity=0.248 Sum_probs=109.9
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+...+|+|+|++..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|+...+....
T Consensus 20 l~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------~~~lvGivt~~dl~~~~~~~~--- 86 (148)
T 3lv9_A 20 FEEKKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRKN----------KDDILGFVHIRDLYNQKINEN--- 86 (148)
T ss_dssp GGTCBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESSS----------TTSEEEEEEHHHHHHHHHHHS---
T ss_pred cCCCCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC----------CCcEEEEEEHHHHHHHHhcCC---
Confidence 6678999999875578899999999999999999999999999874 158999999999987553310
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
..+++++| ++++++++++++.+|+++|.+.+.+++||+|+
T Consensus 87 --------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~- 126 (148)
T 3lv9_A 87 --------------------------------------KIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDE- 126 (148)
T ss_dssp --------------------------------------CCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECT-
T ss_pred --------------------------------------CccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeC-
Confidence 13467788 88999999999999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++++..+
T Consensus 127 ----~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 127 ----YGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp ----TSSEEEEEEHHHHHHHHHHT
T ss_pred ----CCCEEEEEEHHHHHHHHhCc
Confidence 57899999999999987654
No 10
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.76 E-value=2e-18 Score=147.61 Aligned_cols=128 Identities=14% Similarity=0.174 Sum_probs=104.4
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+++|+|+|++..+++++++++++.++++.|.+++++++||++++ +++++|+|+.+|+++++.....
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~~----------~~~lvGivt~~dl~~~~~~~~~---- 66 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRDS----------LDDAISMLRVREAYRLMTEKKE---- 66 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESSS----------GGGEEEEEEHHHHHHHHTSSSC----
T ss_pred CcCHHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcCC----------CCcEEEEEEHHHHHHHHhccCc----
Confidence 36899999753368899999999999999999999999999752 1799999999999876543110
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
. ....++++| ++++++++++++.+++++|.+.+.+++||+|+
T Consensus 67 -----------~-----------------------~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--- 108 (130)
T 3hf7_A 67 -----------F-----------------------TKEIMLRAA-DEIYFVPEGTPLSTQLVKFQRNKKKVGLVVDE--- 108 (130)
T ss_dssp -----------C-----------------------CHHHHHHHS-BCCCEEETTCBHHHHHHHHHHHCCCEEEEECT---
T ss_pred -----------c-----------------------chhhHHHhc-cCCeEeCCCCcHHHHHHHHHhcCCeEEEEEcC---
Confidence 0 001234456 67889999999999999999999999999987
Q ss_pred CCCCcEEEEEeHHHHHHHHHhh
Q 013262 412 AGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|++++...+
T Consensus 109 --~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 109 --YGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp --TSCEEEEEEHHHHHHHHHC-
T ss_pred --CCCEEEEeeHHHHHHHHhCC
Confidence 57899999999999987643
No 11
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.76 E-value=5.2e-18 Score=142.54 Aligned_cols=120 Identities=21% Similarity=0.273 Sum_probs=105.9
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+|+|+|.+ ++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+...
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~G~vt~~dl~~~~~~~------- 60 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIMEAAKILIKHNINHLPIVDEH-----------GKLVGIITSWDIAKALAQN------- 60 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHHHHHHHHHHHTCSCEEEECTT-----------SBEEEEECHHHHHHHHHTT-------
T ss_pred CchHHhhCC--CCEEeCCCCcHHHHHHHHHHcCCCeEEEECCC-----------CCEEEEEEHHHHHHHHHhc-------
Confidence 368999999 89999999999999999999999999999976 8999999999998755331
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
..+++++|.+++.++++++++.+++++|.+.+.+++||+|+
T Consensus 61 -----------------------------------~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---- 101 (122)
T 3kpb_A 61 -----------------------------------KKTIEEIMTRNVITAHEDEPVDHVAIKMSKYNISGVPVVDD---- 101 (122)
T ss_dssp -----------------------------------CCBGGGTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECT----
T ss_pred -----------------------------------ccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCeEEEECC----
Confidence 01466788889999999999999999999999999999987
Q ss_pred CCCcEEEEEeHHHHHHHHHh
Q 013262 413 GVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 413 g~~~lvGIITr~DLl~~~~~ 432 (447)
+|+++|+||++|+++++.+
T Consensus 102 -~g~~~Givt~~dl~~~l~~ 120 (122)
T 3kpb_A 102 -YRRVVGIVTSEDISRLFGG 120 (122)
T ss_dssp -TCBEEEEEEHHHHHHHHC-
T ss_pred -CCCEEEEEeHHHHHHHhhc
Confidence 5789999999999998765
No 12
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.75 E-value=1.4e-17 Score=142.13 Aligned_cols=126 Identities=23% Similarity=0.302 Sum_probs=109.4
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 330 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~ 330 (447)
++.+|+|+|.+ ++.++++++++.++++.|.+++++.+||+| + ++++|+|+.+|+...+....
T Consensus 2 ~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~Givt~~dl~~~~~~~~---- 63 (133)
T 2ef7_A 2 EEEIVKEYMKT--QVISVTKDAKLNDIAKVMTEKNIGSVIVVD-G-----------NKPVGIITERDIVKAIGKGK---- 63 (133)
T ss_dssp CCCBGGGTSBC--SCCEEETTCBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHTTC----
T ss_pred CcccHHHhccC--CCEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-----------CEEEEEEcHHHHHHHHhcCC----
Confidence 56899999998 889999999999999999999999999999 6 89999999999987654311
Q ss_pred cccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 331 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
.....++++|++++.++++++++.++++.|.+.+.+++||+|+
T Consensus 64 -----------------------------------~~~~~v~~~~~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-- 106 (133)
T 2ef7_A 64 -----------------------------------SLETKAEEFMTASLITIREDSPITGALALMRQFNIRHLPVVDD-- 106 (133)
T ss_dssp -----------------------------------CTTCBGGGTSEECCCCEETTSBHHHHHHHHHHHTCSEEEEECT--
T ss_pred -----------------------------------CcccCHHHHcCCCCEEECCCCCHHHHHHHHHHcCCCEEEEECC--
Confidence 0113467788889999999999999999999999999999987
Q ss_pred cCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 411 AAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
+|+++|+||++|+++++.+..
T Consensus 107 ---~g~~~Giit~~dll~~~~~~~ 127 (133)
T 2ef7_A 107 ---KGNLKGIISIRDITRAIDDMF 127 (133)
T ss_dssp ---TSCEEEEEEHHHHHHHHHHHC
T ss_pred ---CCeEEEEEEHHHHHHHHHHHH
Confidence 568999999999999887653
No 13
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.75 E-value=1.1e-17 Score=150.00 Aligned_cols=130 Identities=19% Similarity=0.246 Sum_probs=107.9
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+...+|+|+|++..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|++..+...
T Consensus 39 l~~~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~----------~~~lvGivt~~dl~~~~~~~---- 104 (172)
T 3lhh_A 39 LDERTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRNN----------VDDMVGIISAKQLLSESIAG---- 104 (172)
T ss_dssp ----CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESSS----------TTSEEEEEEHHHHHHHHHTT----
T ss_pred cCCCCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeCC----------CCeEEEEEEHHHHHHHHhhc----
Confidence 5678999999942278999999999999999999999999999863 16899999999998755321
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
...+++++| ++++++++++++.+|+++|.+.+.+++||+|+
T Consensus 105 -------------------------------------~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~- 145 (172)
T 3lhh_A 105 -------------------------------------ERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDE- 145 (172)
T ss_dssp -------------------------------------CCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECT-
T ss_pred -------------------------------------CcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeC-
Confidence 013577789 89999999999999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++..+...
T Consensus 146 ----~g~lvGiit~~Dil~~l~~~~~d 168 (172)
T 3lhh_A 146 ----YGDLKGLVTLQDMMDALTGEFFQ 168 (172)
T ss_dssp ----TSCEEEEEEHHHHHHHHHTTCC-
T ss_pred ----CCCEEEEeeHHHHHHHHhCCCcc
Confidence 57899999999999998865543
No 14
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.74 E-value=6.7e-18 Score=148.32 Aligned_cols=131 Identities=14% Similarity=0.154 Sum_probs=108.3
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEe-cCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVL-DEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVV-d~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
+...+|+++|++..+++++++++++.++++.|.+++++.+||+ +++ +++++|+|+.+||...+....
T Consensus 17 l~~~~v~~iM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVv~d~~----------~~~lvGivt~~dl~~~~~~~~-- 84 (153)
T 3oco_A 17 MNDKVASDVMVDRTSMSVVDVDETIADALLLYLEEQYSRFPVTADND----------KDKIIGYAYNYDIVRQARIDD-- 84 (153)
T ss_dssp HHHCBHHHHSEEGGGCCCEETTSBHHHHHHHHHHHCCSEEEEEETTE----------EEEEEEEEEHHHHHHHHHHHT--
T ss_pred cCCCEeeeEecchhheEEEcCCCCHHHHHHHHHhCCCCEEEEEECCC----------CCcEEEEEEHHHHHhHHhcCC--
Confidence 4568999999853368899999999999999999999999999 542 179999999999987654310
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
..+++++| ++++++.+++++.+|+++|.+.+.+++||+|+
T Consensus 85 ---------------------------------------~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 124 (153)
T 3oco_A 85 ---------------------------------------KAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDE 124 (153)
T ss_dssp ---------------------------------------TSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECT
T ss_pred ---------------------------------------CCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeC
Confidence 13467788 89999999999999999999999999999997
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
+|+++|+||++|+++++..+...+
T Consensus 125 -----~g~~vGivt~~dil~~l~~~~~de 148 (153)
T 3oco_A 125 -----YGGTSGIITDKDVYEELFGNLRDE 148 (153)
T ss_dssp -----TSCEEEEECHHHHHHHHHC-----
T ss_pred -----CCCEEEEeeHHHHHHHHhccCCCc
Confidence 578999999999999988765544
No 15
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.74 E-value=6.3e-18 Score=144.16 Aligned_cols=125 Identities=17% Similarity=0.268 Sum_probs=103.7
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 330 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~ 330 (447)
.+++|+|+|++..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|+++.+..
T Consensus 3 ~~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------~~~~~Givt~~dl~~~~~~------ 66 (129)
T 3jtf_A 3 AERTVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYEDD----------RDNIIGILLAKDLLRYMLE------ 66 (129)
T ss_dssp -CCBHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESSS----------TTCEEEEEEGGGGGGGGTC------
T ss_pred CCCCHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcCC----------CCcEEEEEEHHHHHhHhcc------
Confidence 467899999943278899999999999999999999999999873 1789999999998653211
Q ss_pred cccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 331 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
...+++++|. +++++.+++++.+++++|.+.+.+++||+|+
T Consensus 67 ------------------------------------~~~~v~~~m~-~~~~v~~~~~l~~~~~~m~~~~~~~~pVvd~-- 107 (129)
T 3jtf_A 67 ------------------------------------PALDIRSLVR-PAVFIPEVKRLNVLLREFRASRNHLAIVIDE-- 107 (129)
T ss_dssp ------------------------------------TTSCGGGGCB-CCCEEETTCBHHHHHHHHHTSSCCEEEEECC--
T ss_pred ------------------------------------CCcCHHHHhC-CCeEeCCCCcHHHHHHHHHhcCCeEEEEEeC--
Confidence 0124566775 4889999999999999999999999999997
Q ss_pred cCCCCcEEEEEeHHHHHHHHHhh
Q 013262 411 AAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++++..+
T Consensus 108 ---~g~~~Giit~~Dil~~l~ge 127 (129)
T 3jtf_A 108 ---HGGISGLVTMEDVLEQIVGD 127 (129)
T ss_dssp ----CCEEEEEEHHHHHHHHHHT
T ss_pred ---CCCEEEEEEHHHHHHHHhCC
Confidence 57899999999999987654
No 16
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.74 E-value=3.7e-18 Score=147.08 Aligned_cols=130 Identities=18% Similarity=0.243 Sum_probs=103.7
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+++|+|+|++..+++++++++++.++++.|.+++++.+||++++ .++++|+|+.+||++.+.+..
T Consensus 2 ~~~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~~----------~~~~vGivt~~dl~~~~~~~~----- 66 (136)
T 3lfr_A 2 DLQVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGES----------HDDVLGVLLAKDLLPLILKAD----- 66 (136)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS----------TTCEEEEEEGGGGGGGGGSSS-----
T ss_pred CCChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC----------CCcEEEEEEHHHHHHHHHhcc-----
Confidence 57899999943278999999999999999999999999999874 158999999999976432100
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
....+++++|.+ ++++.+++++.+|+++|.+.+.+++||+|+
T Consensus 67 ----------------------------------~~~~~v~~~m~~-~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--- 108 (136)
T 3lfr_A 67 ----------------------------------GDSDDVKKLLRP-ATFVPESKRLNVLLREFRANHNHMAIVIDE--- 108 (136)
T ss_dssp ----------------------------------GGGCCGGGTCBC-CCEEETTCBHHHHHHHHHHHTCCEEEEECT---
T ss_pred ----------------------------------CCCcCHHHHcCC-CeEECCCCcHHHHHHHHHhcCCeEEEEEeC---
Confidence 012356778865 899999999999999999999999999987
Q ss_pred CCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 412 AGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++..+..+
T Consensus 109 --~g~lvGiit~~Dil~~l~~~~~d 131 (136)
T 3lfr_A 109 --YGGVAGLVTIEDVLEQIVGDIED 131 (136)
T ss_dssp --TSCEEEEEEHHHHHTTC------
T ss_pred --CCCEEEEEEHHHHHHHHhCCCcC
Confidence 57899999999999887765443
No 17
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.74 E-value=2.5e-17 Score=141.58 Aligned_cols=130 Identities=9% Similarity=0.159 Sum_probs=110.4
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHH-HHHhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVL-ALKKKWFL 328 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~-~L~~~~~~ 328 (447)
+...+|+|+|.+ +++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+.+ ++.+..
T Consensus 4 l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~-- 68 (138)
T 2yzi_A 4 DMKAPIKVYMTK--KLLGVKPSTSVQEASRLMMEFDVGSLVVINDD-----------GNVVGFFTKSDIIRRVIVPGL-- 68 (138)
T ss_dssp CTTSBGGGTCBC--CCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHTTTTCC--
T ss_pred hhhhhHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHHhcCC--
Confidence 567899999998 89999999999999999999999999999976 89999999999963 221100
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
.....++++|++++.++++++++.+++++|.+.+.+++ |+|+
T Consensus 69 -------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~ 110 (138)
T 2yzi_A 69 -------------------------------------PYDIPVERIMTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEE 110 (138)
T ss_dssp -------------------------------------CTTSBGGGTCBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEE
T ss_pred -------------------------------------cccCCHHHHhhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECC
Confidence 01234677898999999999999999999999999999 9997
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
+|+++|+||++|+++++.++....
T Consensus 111 -----~g~~~Giit~~dil~~~~~~~~~~ 134 (138)
T 2yzi_A 111 -----EGKIVGIFTLSDLLEASRRRLETA 134 (138)
T ss_dssp -----TTEEEEEEEHHHHHHHHHCCSCCC
T ss_pred -----CCCEEEEEEHHHHHHHHHHHHHhh
Confidence 568999999999999988665443
No 18
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.74 E-value=7.4e-18 Score=143.31 Aligned_cols=125 Identities=12% Similarity=0.053 Sum_probs=107.7
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 330 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~ 330 (447)
.+++++++|.+ ++.++++++++.++.+.|.+++++.+||+|+ ++++|+|+.+|+.+.+....
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------------~~~~Givt~~dl~~~~~~~~---- 64 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTADAARRLAASGCACAPVLDG------------ERYLGMVHLSRLLEGRKGWP---- 64 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHHHHHHHHHHHTCSEEEEEET------------TEEEEEEEHHHHHTTCSSSC----
T ss_pred cceEHHHhhcC--CcceECCCCCHHHHHHHHHHCCCcEEEEEEC------------CEEEEEEEHHHHHHHHhhCC----
Confidence 36899999999 8999999999999999999999999999986 69999999999975332110
Q ss_pred cccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 331 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
....+++++|.+++.++.+++++.+++++|.+.+.+++||+|+
T Consensus 65 -----------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~-- 107 (128)
T 3gby_A 65 -----------------------------------TVKEKLGEELLETVRSYRPGEQLFDNLISVAAAKCSVVPLADE-- 107 (128)
T ss_dssp -----------------------------------CTTCBCCGGGCBCCCCBCTTSBGGGSHHHHHHCSSSEEEEECT--
T ss_pred -----------------------------------cccCcHHHHccCCCcEECCCCCHHHHHHHHHhCCCcEEEEECC--
Confidence 0113477889899999999999999999999999999999987
Q ss_pred cCCCCcEEEEEeHHHHHHHHHhh
Q 013262 411 AAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++++.+.
T Consensus 108 ---~g~~~Giit~~dll~~l~~~ 127 (128)
T 3gby_A 108 ---DGRYEGVVSRKRILGFLAER 127 (128)
T ss_dssp ---TCBEEEEEEHHHHHHHHHTT
T ss_pred ---CCCEEEEEEHHHHHHHHHhh
Confidence 57899999999999987653
No 19
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.74 E-value=3.3e-18 Score=145.44 Aligned_cols=124 Identities=20% Similarity=0.368 Sum_probs=101.5
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|+.+.+....
T Consensus 2 ~~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~----------~~~~vGivt~~dl~~~~~~~~----- 66 (127)
T 3nqr_A 2 DQRVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISED----------KDHIEGILMAKDLLPFMRSDA----- 66 (127)
T ss_dssp -CBHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS----------TTCEEEEEEGGGGGGGGSTTC-----
T ss_pred CcCHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcCC----------CCcEEEEEEHHHHHHHHhccC-----
Confidence 57899999962148999999999999999999999999999874 168999999999965432110
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
...+++++|. ++.++++++++.+++++|.+.+.+++||+|+
T Consensus 67 -----------------------------------~~~~v~~~m~-~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--- 107 (127)
T 3nqr_A 67 -----------------------------------EAFSMDKVLR-TAVVVPESKRVDRMLKEFRSQRYHMAIVIDE--- 107 (127)
T ss_dssp -----------------------------------CCCCHHHHCB-CCCEEETTCBHHHHHHHHHHTTCCEEEEECT---
T ss_pred -----------------------------------CCCCHHHHcC-CCeEECCCCcHHHHHHHHHhcCCeEEEEEeC---
Confidence 1123556674 4789999999999999999999999999997
Q ss_pred CCCCcEEEEEeHHHHHHHHH
Q 013262 412 AGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~ 431 (447)
+|+++|+||++|+++++.
T Consensus 108 --~g~~~Giit~~dll~~l~ 125 (127)
T 3nqr_A 108 --FGGVSGLVTIEDILELIV 125 (127)
T ss_dssp --TSCEEEEEEHHHHHHHC-
T ss_pred --CCCEEEEEEHHHHHHHHh
Confidence 578999999999998754
No 20
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.73 E-value=2.9e-17 Score=146.08 Aligned_cols=137 Identities=15% Similarity=0.109 Sum_probs=113.4
Q ss_pred CCcccccccccccccCC-CCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 246 PEPWMRTLTVGELIDAK-PPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 246 ~~~~l~~l~v~diM~~~-~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
....+..++|+|+|.++ .+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+..
T Consensus 17 ~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~ 85 (165)
T 3fhm_A 17 LYFQGMATFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDAD-----------GVVLGIFTERDLVKAVAG 85 (165)
T ss_dssp CCCSSSSCBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHHH
T ss_pred hhHhhhhcCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CeEEEEEEHHHHHHHHHh
Confidence 44457789999999951 268899999999999999999999999999986 899999999999876643
Q ss_pred hhhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEE
Q 013262 325 KWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLL 404 (447)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~Lp 404 (447)
... .....+++++|.++++++.+++++.+++++|.+.+.+++|
T Consensus 86 ~~~-------------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lp 128 (165)
T 3fhm_A 86 QGA-------------------------------------ASLQQSVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVP 128 (165)
T ss_dssp HGG-------------------------------------GGGTSBGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEE
T ss_pred cCC-------------------------------------ccccCCHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEE
Confidence 210 0012357788889999999999999999999999999999
Q ss_pred EEeCcccCCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 405 VVPKYEAAGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 405 VVd~~~~~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
|+|+ |+++|+||++|+++++.++...
T Consensus 129 Vvd~------g~~~Giit~~dil~~~~~~~~~ 154 (165)
T 3fhm_A 129 VEEN------GRLAGIISIGDVVKARIGEIEA 154 (165)
T ss_dssp EEET------TEEEEEEEHHHHHHHTTCC---
T ss_pred EEEC------CEEEEEEEHHHHHHHHHHHHHH
Confidence 9984 6799999999999988765443
No 21
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.73 E-value=3.2e-17 Score=144.91 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=111.1
Q ss_pred ccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 249 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 249 ~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
.+..++|+|+|.+ ++ ++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+.....
T Consensus 13 ~l~~~~v~~im~~--~~-~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~- 77 (159)
T 3fv6_A 13 KLKKLQVKDFQSI--PV-VIHENVSVYDAICTMFLEDVGTLFVVDRD-----------AVLVGVLSRKDLLRASIGQQE- 77 (159)
T ss_dssp HHTTCBGGGSCBC--CC-EEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHTSCSC-
T ss_pred HHhhCCHHHHcCC--CE-EECCCCcHHHHHHHHHHCCCCEEEEEcCC-----------CcEEEEEeHHHHHHHhhccCc-
Confidence 3667899999987 65 89999999999999999999999999976 899999999999875522100
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEE
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVV 406 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVV 406 (447)
....+++++|.+ +++++.+++++.+|+++|.+.+.+++||+
T Consensus 78 -------------------------------------~~~~~v~~~m~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVv 120 (159)
T 3fv6_A 78 -------------------------------------LTSVPVHIIMTRMPNITVCRREDYVMDIAKHLIEKQIDALPVI 120 (159)
T ss_dssp -------------------------------------TTTCBGGGTSEETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEE
T ss_pred -------------------------------------ccCcCHHHHHcCCCCcEEECCCCCHHHHHHHHHHcCCcEEEEE
Confidence 012346778887 88999999999999999999999999999
Q ss_pred eCcccCCCC---cEEEEEeHHHHHHHHHhhhcCc
Q 013262 407 PKYEAAGVS---PVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 407 d~~~~~g~~---~lvGIITr~DLl~~~~~~~~~~ 437 (447)
|+ +| +++|+||++|+++++.+-....
T Consensus 121 d~-----~g~~~~~vGiit~~dil~~l~~~~~~~ 149 (159)
T 3fv6_A 121 KD-----TDKGFEVIGRVTKTNMTKILVSLSENE 149 (159)
T ss_dssp EE-----CSSSEEEEEEEEHHHHHHHHHHHHTTC
T ss_pred eC-----CCcceeEEEEEEHHHHHHHHHHHhhcc
Confidence 97 45 8999999999999988755443
No 22
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.73 E-value=3.6e-17 Score=141.34 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=106.1
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCc--eEEEEEeHHHHHHHHHhhhhhh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVAT--ELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~--~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
.++|+|+|.+ +++++++++++.++++.|.+++++.+||+|++ + +++|+|+++|+.+.+.+..
T Consensus 4 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~~~Givt~~dl~~~~~~~~--- 67 (141)
T 2rih_A 4 AIRTSELLKR--PPVSLPETATIREVATELAKNRVGLAVLTARD-----------NPKRPVAVVSERDILRAVAQRL--- 67 (141)
T ss_dssp -CBGGGGCCS--CCEEEETTCBHHHHHHHHHHHTCSEEEEEETT-----------EEEEEEEEEEHHHHHHHHHTTC---
T ss_pred ceEHHHHhcC--CCeEeCCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcceeEEEEEHHHHHHHHhcCC---
Confidence 4689999998 89999999999999999999999999999986 7 9999999999987654310
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
....+++++|.+++.+++++ ++.+|+++|.+.+.+++||+|+
T Consensus 68 ------------------------------------~~~~~v~~~m~~~~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~- 109 (141)
T 2rih_A 68 ------------------------------------DLDGPAMPIANSPITVLDTD-PVHVAAEKMRRHNIRHVVVVNK- 109 (141)
T ss_dssp ------------------------------------CTTSBSGGGCBCCCEEETTS-BHHHHHHHHHHHTCSEEEEECT-
T ss_pred ------------------------------------CCCCCHHHHcCCCCeEEcCC-CHHHHHHHHHHcCCeEEEEEcC-
Confidence 01135777888999999999 9999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+|+++|+||++|++++...
T Consensus 110 ----~g~~~Giit~~dll~~~~~ 128 (141)
T 2rih_A 110 ----NGELVGVLSIRDLCFERAI 128 (141)
T ss_dssp ----TSCEEEEEEHHHHHSCHHH
T ss_pred ----CCcEEEEEEHHHHHHHHHH
Confidence 5789999999999876543
No 23
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.73 E-value=1.7e-17 Score=142.41 Aligned_cols=128 Identities=19% Similarity=0.303 Sum_probs=107.7
Q ss_pred ccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHH-HHHHHhhhh
Q 013262 249 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHL-VLALKKKWF 327 (447)
Q Consensus 249 ~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL-~~~L~~~~~ 327 (447)
.+.+.+++++|.+ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+++|+ ...+....
T Consensus 4 ~l~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~- 69 (138)
T 2p9m_A 4 TLKNIKVKDVMTK--NVITAKRHEGVVEAFEKMLKYKISSLPVIDDE-----------NKVIGIVTTTDIGYNLIRDKY- 69 (138)
T ss_dssp -CTTCBGGGTSBC--SCCCEETTSBHHHHHHHHHHHTCCEEEEECTT-----------CBEEEEEEHHHHHHHHTTTCC-
T ss_pred ccccCCHHHhhcC--CceEECCCCcHHHHHHHHHHCCCcEEEEECCC-----------CeEEEEEEHHHHHHHHHhhcc-
Confidence 3567899999998 88999999999999999999999999999976 899999999999 76443210
Q ss_pred hhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcC-----CCE
Q 013262 328 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVG-----LRH 402 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~g-----l~~ 402 (447)
.....++++|++++.++++++++.++++.|.+.+ .++
T Consensus 70 --------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~ 111 (138)
T 2p9m_A 70 --------------------------------------TLETTIGDVMTKDVITIHEDASILEAIKKMDISGKKEEIINQ 111 (138)
T ss_dssp --------------------------------------CSSCBHHHHSCSSCCCEETTSBHHHHHHHHTCC-----CCCE
T ss_pred --------------------------------------cCCcCHHHHhCCCcEEECCCCCHHHHHHHHHhcCCccccccE
Confidence 0112355678888999999999999999999999 999
Q ss_pred EEEEeCcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 403 LLVVPKYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 403 LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+||+|+ +|+++|+||++|+++++.++
T Consensus 112 l~Vvd~-----~g~~~Giit~~dll~~~~~~ 137 (138)
T 2p9m_A 112 LPVVDK-----NNKLVGIISDGDIIRTISKI 137 (138)
T ss_dssp EEEECT-----TSBEEEEEEHHHHHHHHHHC
T ss_pred EEEECC-----CCeEEEEEEHHHHHHHHHhh
Confidence 999996 57899999999999987653
No 24
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.73 E-value=2.4e-17 Score=148.36 Aligned_cols=132 Identities=17% Similarity=0.168 Sum_probs=109.9
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+...+|+|+|++..+++++++++++.++++.|.+++++.+||++++ .++++|+|+.+||+..+...
T Consensus 33 l~~~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~----------~~~lvGivt~~Dl~~~~~~~---- 98 (173)
T 3ocm_A 33 LAERSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRGS----------LDEVVGIGRAKDLVADLITE---- 98 (173)
T ss_dssp HTTSCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESSS----------TTSEEEEEEHHHHHHHHHHH----
T ss_pred cCCCCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeCC----------CCCEEEEEEHHHHHHHHhcC----
Confidence 5678999999753368899999999999999999999999999863 16899999999998755321
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
...+++ |.+++++|++++++.+|+++|.+.+.+.+||+|+
T Consensus 99 -------------------------------------~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde- 138 (173)
T 3ocm_A 99 -------------------------------------GRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADE- 138 (173)
T ss_dssp -------------------------------------SSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECT-
T ss_pred -------------------------------------CcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeC-
Confidence 012344 3477889999999999999999999999999987
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhhhcCccc
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILTAFPHLE 439 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~~~~~~~ 439 (447)
+|+++||||++|+++++..+...+..
T Consensus 139 ----~g~lvGiIT~~Dil~~l~~~i~de~~ 164 (173)
T 3ocm_A 139 ----FGAIEGLVTPIDVFEAIAGEFPDEDE 164 (173)
T ss_dssp ----TCCEEEEECHHHHHHHHHCCCCCTTS
T ss_pred ----CCCEEEEEeHHHHHHHHhCcCCCccc
Confidence 57899999999999999876655543
No 25
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.72 E-value=3.3e-17 Score=142.96 Aligned_cols=137 Identities=19% Similarity=0.118 Sum_probs=111.5
Q ss_pred cccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhh
Q 013262 248 PWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWF 327 (447)
Q Consensus 248 ~~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~ 327 (447)
..+..++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+||...+.....
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~~ 78 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDPM-----------YKLHGLISTAMILDGILGLER 78 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHTBCSSS
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECCC-----------CCEEEEEEHHHHHHHHHhhcc
Confidence 346789999999952268899999999999999999999999999987 899999999999875532100
Q ss_pred hhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEe
Q 013262 328 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVP 407 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd 407 (447)
. . .+.....+++++|.+++.++.+++++.+|+++|.+.+. +||+|
T Consensus 79 ~---------------~------------------~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd 123 (150)
T 3lqn_A 79 I---------------E------------------FERLEEMKVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVN 123 (150)
T ss_dssp B---------------C------------------GGGGGGCBGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEEC
T ss_pred c---------------c------------------hhHHhcCCHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEEC
Confidence 0 0 00012345788899999999999999999999999987 99999
Q ss_pred CcccCCCCcEEEEEeHHHHHHHHHhhhc
Q 013262 408 KYEAAGVSPVVGILTRQDLRAFNILTAF 435 (447)
Q Consensus 408 ~~~~~g~~~lvGIITr~DLl~~~~~~~~ 435 (447)
+ +|+++|+||++|+++++.+...
T Consensus 124 ~-----~g~~~Giit~~dil~~l~~~~~ 146 (150)
T 3lqn_A 124 E-----DGYFEGILTRRAILKLLNKKVR 146 (150)
T ss_dssp T-----TCBEEEEEEHHHHHHHHHHHC-
T ss_pred C-----CCcEEEEEEHHHHHHHHHHHhH
Confidence 7 5789999999999999887543
No 26
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.71 E-value=5.1e-17 Score=136.91 Aligned_cols=123 Identities=11% Similarity=0.125 Sum_probs=103.6
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
++|+|+|.+ ++.++++++++.++.+.|.+++++.+||+| + ++++|+|+.+|+.+.+.+...
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~G~it~~dl~~~~~~~~~----- 61 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLEDVLRNYVENAKGSSVVVK-E-----------GVRVGIVTTWDVLEAIAEGDD----- 61 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHHHHHHHHHHHCCCEEEEEE-T-----------TEEEEEEEHHHHHHHHHHTCC-----
T ss_pred CCHHHhcCC--CceEECCCCcHHHHHHHHHHcCCCEEEEEe-C-----------CeeEEEEeHHHHHHHHhcCCc-----
Confidence 478999998 899999999999999999999999999999 6 899999999999876543110
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
....+++++|.+++.++++++++.+++++|.+.+.+++||+|+
T Consensus 62 ---------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~---- 104 (125)
T 1pbj_A 62 ---------------------------------LAEVKVWEVMERDLVTISPRATIKEAAEKMVKNVVWRLLVEED---- 104 (125)
T ss_dssp ---------------------------------TTTSBHHHHCBCGGGEECTTSCHHHHHHHHHHHTCSEEEEEET----
T ss_pred ---------------------------------ccccCHHHHcCCCCeEECCCCCHHHHHHHHHhcCCcEEEEEEC----
Confidence 0112456677788999999999999999999999999999984
Q ss_pred CCCcEEEEEeHHHHHHHHHhh
Q 013262 413 GVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 413 g~~~lvGIITr~DLl~~~~~~ 433 (447)
|+++|+||++|+++++.++
T Consensus 105 --~~~~Gvit~~dl~~~l~~~ 123 (125)
T 1pbj_A 105 --DEIIGVISATDILRAKMAK 123 (125)
T ss_dssp --TEEEEEEEHHHHHHHHC--
T ss_pred --CEEEEEEEHHHHHHHHHhc
Confidence 6799999999999987654
No 27
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.71 E-value=7.7e-17 Score=142.05 Aligned_cols=141 Identities=16% Similarity=0.159 Sum_probs=110.5
Q ss_pred ccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCe-EEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhh-
Q 013262 249 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNG-FPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW- 326 (447)
Q Consensus 249 ~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~-fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~- 326 (447)
....++|+|+|.+ +++++++++++.++++.|.+++++. +||+|+ ++++|+|+.+||...+....
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~------------~~~vGivt~~dl~~~~~~~~~ 77 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIEEIVDRILEDPVTRTVYVARD------------NKLVGMIPVMHLLKVSGFHFF 77 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHHHHHHHHHHSTTCCEEEEEET------------TEEEEEEEHHHHHHHHHHHHH
T ss_pred hhccccHhhcccC--CCceECCCCCHHHHHHHHHhCCCCccEEEEEC------------CEEEEEEEHHHHHHHHhhhHH
Confidence 4567899999999 9999999999999999999999999 999986 48999999999987654210
Q ss_pred -hhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEE
Q 013262 327 -FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 405 (447)
Q Consensus 327 -~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpV 405 (447)
+... ...+... .......+++++|++ ++++++++++.+|+++|.+.+.+++||
T Consensus 78 ~~~~~--------------~~~~~~~-----------~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpV 131 (157)
T 1o50_A 78 GFIPK--------------EELIRSS-----------MKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPV 131 (157)
T ss_dssp CCCC---------------------C-----------CCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred hhhcc--------------HHHHHHH-----------HHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEE
Confidence 0000 0000000 000122457788988 999999999999999999999999999
Q ss_pred EeCcccCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 406 VPKYEAAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 406 Vd~~~~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
+|+ +|+++|+||++|+++++.++.
T Consensus 132 vd~-----~g~~vGiit~~dll~~l~~~~ 155 (157)
T 1o50_A 132 VDE-----KGEIVGDLNSLEILLALWKGR 155 (157)
T ss_dssp ECT-----TSCEEEEEEHHHHHHHHHHSC
T ss_pred EcC-----CCEEEEEEEHHHHHHHHHHhh
Confidence 996 568999999999999887653
No 28
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.71 E-value=1.4e-17 Score=145.50 Aligned_cols=121 Identities=10% Similarity=0.117 Sum_probs=102.7
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.+.+.+...
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~----- 91 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDDD-----------MNIIGIFTDGDLRRVFDTGVD----- 91 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECTT-----------CBEEEEEEHHHHHHHHCSSSC-----
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECCC-----------CcEEEEecHHHHHHHHhcCCC-----
Confidence 5899999863357899999999999999999999999999976 899999999999876543110
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
....++.++|.+++.++++++++.+++++|.+.+.+++||+|+
T Consensus 92 ---------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---- 134 (149)
T 3k2v_A 92 ---------------------------------MRDASIADVMTRGGIRIRPGTLAVDALNLMQSRHITCVLVADG---- 134 (149)
T ss_dssp ---------------------------------CTTCBHHHHSEESCCEECTTCBHHHHHHHHHHHTCSEEEEEET----
T ss_pred ---------------------------------cccCcHHHHcCCCCeEECCCCCHHHHHHHHHHcCCCEEEEecC----
Confidence 0112456678888999999999999999999999999999996
Q ss_pred CCCcEEEEEeHHHHHH
Q 013262 413 GVSPVVGILTRQDLRA 428 (447)
Q Consensus 413 g~~~lvGIITr~DLl~ 428 (447)
+ +++|+||++|+++
T Consensus 135 -~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 135 -D-HLLGVVHMHDLLR 148 (149)
T ss_dssp -T-EEEEEEEHHHHTC
T ss_pred -C-EEEEEEEHHHhhc
Confidence 3 8999999999975
No 29
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.71 E-value=2.9e-17 Score=143.01 Aligned_cols=142 Identities=23% Similarity=0.303 Sum_probs=108.8
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 330 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~ 330 (447)
..++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ ++++|+|+++|+..++.....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~G~vt~~dl~~~~~~~~~--- 68 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVDEALELLVENRITGFPVIDED-----------WKLVGLVSDYDLLALDSGDST--- 68 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHTTCC----C---
T ss_pred ceEEhhhccCCCCCCeEECCCCcHHHHHHHHHHcCCceEEEEeCC-----------CeEEEEEEHHHHHHhhcccCc---
Confidence 357899999874468899999999999999999999999999987 899999999999653321100
Q ss_pred cccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 331 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
+..+... +. . .......++.++|.++++++++++++.+++++|.+.+.+++||+|+
T Consensus 69 --------------~~~~~~~----~~--~--~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~-- 124 (152)
T 4gqw_A 69 --------------WKTFNAV----QK--L--LSKTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDS-- 124 (152)
T ss_dssp --------------CHHHHHH----HT--C-------CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECT--
T ss_pred --------------ccchHHH----HH--H--HHHhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECC--
Confidence 0000000 00 0 0001224577788888999999999999999999999999999997
Q ss_pred cCCCCcEEEEEeHHHHHHHHHhh
Q 013262 411 AAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++++.+.
T Consensus 125 ---~g~~~Giit~~dil~~~~~~ 144 (152)
T 4gqw_A 125 ---DGKLVGIITRGNVVRAALQI 144 (152)
T ss_dssp ---TSBEEEEEEHHHHHHHHHC-
T ss_pred ---CCcEEEEEEHHHHHHHHHhc
Confidence 57899999999999988764
No 30
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.71 E-value=8e-17 Score=141.50 Aligned_cols=138 Identities=20% Similarity=0.148 Sum_probs=109.5
Q ss_pred ccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 249 WMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 249 ~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
.+..++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+....
T Consensus 7 ~l~~~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~-- 73 (157)
T 2emq_A 7 EFMQMTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDTS-----------YKLHGLISMTMMMDAILGLE-- 73 (157)
T ss_dssp ---CCBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECTT-----------CCEEEEEEHHHHHHHSBCSS--
T ss_pred hHhhCcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcCC-----------CCEEEEeeHHHHHHHHhccc--
Confidence 35678999999842267889999999999999999999999999976 89999999999976543210
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
. ... .......++++|.+++.++++++++.+|+++|.+.+. +||+|+
T Consensus 74 --~-----------~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~ 120 (157)
T 2emq_A 74 --R-----------IEF------------------ERLETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVEND 120 (157)
T ss_dssp --S-----------BCG------------------GGGGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECS
T ss_pred --c-----------cch------------------HHhcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcC
Confidence 0 000 0001245778899999999999999999999999987 999987
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
+|+++|+||++|+++++.+...+.
T Consensus 121 -----~g~~~Giit~~dil~~~~~~~~~~ 144 (157)
T 2emq_A 121 -----DGYFAGIFTRREVLKQLNKQLHRP 144 (157)
T ss_dssp -----SSSEEEEEEHHHHHHHHHHTTCCC
T ss_pred -----CCeEEEEEEHHHHHHHHHHHhhcc
Confidence 578999999999999988765443
No 31
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.70 E-value=3.3e-17 Score=147.02 Aligned_cols=156 Identities=19% Similarity=0.276 Sum_probs=110.6
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
.++|+|+|.+..+++++++++++.++++.|.+++++++||+|++ ++++|+|+.+||.+++........
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-----------~~~~Givt~~dl~~~~~~~~~~~~- 70 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVDDALELLVEKKVTGLPVIDDN-----------WTLVGVVSDYDLLALDSISGRSQN- 70 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHTCC----------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHHHHHHHHHHcCCCeEEEECCC-----------CeEEEEEEHHHHHhhhhhccccCC-
Confidence 47899999874457899999999999999999999999999987 899999999999743211000000
Q ss_pred ccchhhhhhh--cchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 332 RRTEEWEVRE--KFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 332 ~~~~~~~~~~--~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
.. .... ...+..+.. .+.. .......+++++|+++++++++++++.+|+++|.+.+.+++||+|+
T Consensus 71 ---~~-~~~~~~~~~~~~~~~----~~~~----~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~- 137 (180)
T 3sl7_A 71 ---DT-NLFPDVDSTWKTFNE----LQKL----ISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDA- 137 (180)
T ss_dssp --------------CCCSHHH----HHHH----HHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECT-
T ss_pred ---cc-cccccccchhhhhHH----HHHH----HhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECC-
Confidence 00 0000 000000000 0000 0011234578899999999999999999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++.+...+
T Consensus 138 ----~g~~vGiit~~dil~~~~~~~~~ 160 (180)
T 3sl7_A 138 ----DGKLIGILTRGNVVRAALQIKRN 160 (180)
T ss_dssp ----TCBEEEEEEHHHHHHHHHHHHHT
T ss_pred ----CCeEEEEEEHHHHHHHHHHHhhh
Confidence 57899999999999998765443
No 32
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.70 E-value=1.4e-16 Score=147.26 Aligned_cols=127 Identities=16% Similarity=0.167 Sum_probs=108.2
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcC---CCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT---THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWF 327 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~---~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~ 327 (447)
...+|+++|++ ++++++++.++.++++.|++. +++.+||+|++ ++++|+|+.+||+.. .
T Consensus 52 ~~~~v~~iM~~--~~~~v~~~~tv~eal~~~~~~~~~~~~~~~Vvd~~-----------~~lvGivt~~dll~~---~-- 113 (205)
T 3kxr_A 52 SENEIGRYTDH--QMLVLSDKATVAQAQRFFRRIELDCNDNLFIVDEA-----------DKYLGTVRRYDIFKH---E-- 113 (205)
T ss_dssp CTTCGGGGCBC--CCCEEETTCBHHHHHHHHHHCCCTTCCEEEEECTT-----------CBEEEEEEHHHHTTS---C--
T ss_pred CcchHHhhccC--ceEEECCCCcHHHHHHHHHhhCccCeeEEEEEcCC-----------CeEEEEEEHHHHHhC---C--
Confidence 45689999999 999999999999999999886 67899999987 899999999998431 0
Q ss_pred hhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEe
Q 013262 328 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVP 407 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd 407 (447)
....++++|++++++|++++++.+|+++|.+++++.+||||
T Consensus 114 ---------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD 154 (205)
T 3kxr_A 114 ---------------------------------------PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVID 154 (205)
T ss_dssp ---------------------------------------TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEEC
T ss_pred ---------------------------------------CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEc
Confidence 01346778989999999999999999999999999999999
Q ss_pred CcccCCCCcEEEEEeHHHHHHHHHhhhcCccc
Q 013262 408 KYEAAGVSPVVGILTRQDLRAFNILTAFPHLE 439 (447)
Q Consensus 408 ~~~~~g~~~lvGIITr~DLl~~~~~~~~~~~~ 439 (447)
+ +|+++|+||++|+++.+.++..+...
T Consensus 155 ~-----~g~lvGiIT~~Dil~~i~~e~~ed~~ 181 (205)
T 3kxr_A 155 D-----AGELIGRVTLRAATALVREHYEAQLM 181 (205)
T ss_dssp T-----TSBEEEEEEHHHHHHHHHHHHC----
T ss_pred C-----CCeEEEEEEHHHHHHHHHHHHHHHHH
Confidence 7 57899999999999998877665544
No 33
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.70 E-value=9.5e-17 Score=142.08 Aligned_cols=134 Identities=16% Similarity=0.258 Sum_probs=108.9
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQE 330 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~ 330 (447)
..++|+|+|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+||...+........
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~dl~~~~~~~~~~~~ 69 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLNDAKHLMEALDIRHVPIVDAN-----------KKLLGIVSQRDLLAAQESSLQRSA 69 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHHHCC---
T ss_pred CcCcHHHHhcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHHHhhcccc
Confidence 35789999998 89999999999999999999999999999976 899999999999876543210000
Q ss_pred cccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 331 KRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 331 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
. ........+++++|+++++++++++++.+|+++|.+.+.+.+||+|+
T Consensus 70 -------~-----------------------~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-- 117 (160)
T 2o16_A 70 -------Q-----------------------GDSLAFETPLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-- 117 (160)
T ss_dssp ------------------------------------CCCBHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET--
T ss_pred -------c-----------------------ccchhcccCHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC--
Confidence 0 00001123567788889999999999999999999999999999984
Q ss_pred cCCCCcEEEEEeHHHHHHHHHhh
Q 013262 411 AAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
|+++|+||++|+++++.+.
T Consensus 118 ----g~lvGiit~~dil~~~~~~ 136 (160)
T 2o16_A 118 ----DVLVGIITDSDFVTIAINL 136 (160)
T ss_dssp ----TEEEEEECHHHHHHHHHHH
T ss_pred ----CEEEEEEEHHHHHHHHHHH
Confidence 6799999999999987653
No 34
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.70 E-value=1.4e-16 Score=143.71 Aligned_cols=159 Identities=20% Similarity=0.368 Sum_probs=112.6
Q ss_pred cccccccccccccCCCC--eeEe--cCCCCHHHHHHHHhcCCCCeEEEe--cCCCCCCCCCCCCCceEEEEEeHHHHHHH
Q 013262 248 PWMRTLTVGELIDAKPP--VITL--SGIEKVSQIVDVLRNTTHNGFPVL--DEGVVPPSGLANVATELHGLILRAHLVLA 321 (447)
Q Consensus 248 ~~l~~l~v~diM~~~~~--vv~l--~~~~tv~~~~~~L~~~~~~~fPVV--d~~~~~~~~~~~~~~~lvGiIt~~dL~~~ 321 (447)
..+...+|+|+|.+..+ ++++ ++++++.++++.|.+++++.+||+ |++ ++++|+|+.+|+...
T Consensus 6 ~~~~~~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~~-----------~~lvGiit~~dl~~~ 74 (185)
T 2j9l_A 6 EFAHKTLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRES-----------QRLVGFVLRRDLIIS 74 (185)
T ss_dssp ---CCCBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTTT-----------CBEEEEEEHHHHHHH
T ss_pred hhhccCcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECCC-----------CeEEEEEEHHHHHHH
Confidence 34678999999998211 7788 999999999999999999999999 554 899999999999887
Q ss_pred HHhhhhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCC
Q 013262 322 LKKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLR 401 (447)
Q Consensus 322 L~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~ 401 (447)
+.......... .. . .. ..+... ..+ .........+++++|+++++++++++++.+|+++|.+.+.+
T Consensus 75 ~~~~~~~~~~~-~~--~---~~--~~~~~~---~~~---~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~ 140 (185)
T 2j9l_A 75 IENARKKQDGV-VS--T---SI--IYFTEH---SPP---LPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLR 140 (185)
T ss_dssp HHHHHTSCSCC-CT--T---CE--EECSSS---CCC---CCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCS
T ss_pred HHhhcccCCCc-cc--c---ce--eecccC---Ccc---cccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCc
Confidence 65421000000 00 0 00 000000 000 00001123468889999999999999999999999999999
Q ss_pred EEEEEeCcccCCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 402 HLLVVPKYEAAGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 402 ~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
++||+|+ |+++|+||++|+++++.+.....
T Consensus 141 ~l~Vvd~------g~~vGiit~~dll~~l~~~~~~~ 170 (185)
T 2j9l_A 141 QCLVTHN------GRLLGIITKKDVLKHIAQMANQD 170 (185)
T ss_dssp EEEEEET------TEEEEEEEHHHHHHHHHHHCC--
T ss_pred EEEEEEC------CEEEEEEEHHHHHHHHHHhhccc
Confidence 9999984 67999999999999988765543
No 35
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.70 E-value=8.2e-17 Score=141.50 Aligned_cols=135 Identities=14% Similarity=0.103 Sum_probs=109.8
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+...+++|+|.+..+++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|+...+.......
T Consensus 12 l~~~~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~~ 80 (156)
T 3ctu_A 12 FLLGQEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTDE-----------KQFVGTIGLRDIMAYQMEHDLSQ 80 (156)
T ss_dssp HHHTTGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------------CBEEEEEEHHHHHHHHHHHTCCH
T ss_pred HHHHHHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECCC-----------CEEEEEEcHHHHHHHHHhccccc
Confidence 3456789999943388999999999999999999999999999986 89999999999988665421100
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
. ......++++|.++++++.+++++.+|+++|.+.+ ++||+|+
T Consensus 81 ----------------~------------------~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~- 123 (156)
T 3ctu_A 81 ----------------E------------------IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDA- 123 (156)
T ss_dssp ----------------H------------------HHTTSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECT-
T ss_pred ----------------c------------------ccccCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcC-
Confidence 0 00124577889899999999999999999999886 7999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++.+...+
T Consensus 124 ----~g~~~Giit~~dil~~l~~~~~~ 146 (156)
T 3ctu_A 124 ----EGIFQGIITRKSILKAVNALLHD 146 (156)
T ss_dssp ----TSBEEEEEETTHHHHHHHHHSCC
T ss_pred ----CCeEEEEEEHHHHHHHHHHHHHh
Confidence 57899999999999998876543
No 36
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.70 E-value=1.6e-16 Score=136.05 Aligned_cols=124 Identities=17% Similarity=0.164 Sum_probs=104.4
Q ss_pred cccccccc---CCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 253 LTVGELID---AKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 253 l~v~diM~---~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
.+|+|+|. + +++++++++++.++++.|.+++++.+||+| + ++++|+|+.+|+.+.+.....
T Consensus 6 ~~v~~im~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd-~-----------~~~~Givt~~dl~~~~~~~~~-- 69 (135)
T 2rc3_A 6 KTVKHLLQEKGH--TVVAIGPDDSVFNAMQKMAADNIGALLVMK-D-----------EKLVGILTERDFSRKSYLLDK-- 69 (135)
T ss_dssp CBHHHHHHHHCC--CCCEECTTSBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHGGGSSS--
T ss_pred eeHHHHHhcCCC--CcEEECCCCcHHHHHHHHHhcCCCEEEEEE-C-----------CEEEEEEehHHHHHHHHHcCC--
Confidence 38999999 7 889999999999999999999999999998 5 899999999999753221100
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
......++++|.+++.++++++++.+++++|.+.+.+++||+|+
T Consensus 70 -----------------------------------~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~- 113 (135)
T 2rc3_A 70 -----------------------------------PVKDTQVKEIMTRQVAYVDLNNTNEDCMALITEMRVRHLPVLDD- 113 (135)
T ss_dssp -----------------------------------CGGGSBGGGTSBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-
T ss_pred -----------------------------------CcccCCHHHhccCCCeEECCCCcHHHHHHHHHHhCCCEEEEEeC-
Confidence 00123577889899999999999999999999999999999984
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
|+++|+||++|+++++.++
T Consensus 114 -----g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 114 -----GKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp -----TEEEEEEEHHHHHHHHHC-
T ss_pred -----CEEEEEEEHHHHHHHHHhc
Confidence 5799999999999987654
No 37
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.69 E-value=2.1e-16 Score=136.33 Aligned_cols=127 Identities=17% Similarity=0.266 Sum_probs=102.0
Q ss_pred ccccccc---cccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhh
Q 013262 251 RTLTVGE---LIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWF 327 (447)
Q Consensus 251 ~~l~v~d---iM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~ 327 (447)
.+.++++ +|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+....+
T Consensus 6 ~~~~v~~~~~~~~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~ 72 (144)
T 2nyc_A 6 LKIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-----------GYLINVYEAYDVLGLIKGGIY 72 (144)
T ss_dssp GGSBGGGSSCCBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHTC--
T ss_pred hhcchhhcCCCCCC--CceEECCCCcHHHHHHHHHHcCcceeeEEcCC-----------CcEEEEEcHHHHHHHhccccc
Confidence 3557778 8887 88999999999999999999999999999976 899999999999876543110
Q ss_pred hhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccC------CCceecCCCCHHHHHHHHHHcCCC
Q 013262 328 LQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT------TPYTVIESMSVAKAMVLFRQVGLR 401 (447)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~------~p~tV~~~~sL~~a~~lf~~~gl~ 401 (447)
.. ... .++++|.+ ++.++++++++.+++++|.+.+.+
T Consensus 73 ~~-----------~~~--------------------------~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~ 115 (144)
T 2nyc_A 73 ND-----------LSL--------------------------SVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVH 115 (144)
T ss_dssp -------------CCS--------------------------BHHHHHHHCC------CEECTTSBHHHHHHHHHHHTCS
T ss_pred cc-----------CCc--------------------------cHHHHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCC
Confidence 00 011 23334433 578999999999999999999999
Q ss_pred EEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 402 HLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 402 ~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
++||+|+ +|+++|+||++|+++++.+
T Consensus 116 ~l~Vvd~-----~g~~~Giit~~dil~~l~~ 141 (144)
T 2nyc_A 116 RFFVVDD-----VGRLVGVLTLSDILKYILL 141 (144)
T ss_dssp EEEEECT-----TSBEEEEEEHHHHHHHHHH
T ss_pred EEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 9999997 5789999999999998765
No 38
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.69 E-value=2.7e-16 Score=138.88 Aligned_cols=134 Identities=18% Similarity=0.287 Sum_probs=105.0
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
...++|+|+|.+ +++++++++++.++.+.|.+++++++||+|++ ++++++|+|+.+|+...+.......
T Consensus 10 ~~~~~v~dim~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~~---------~~~~~~Givt~~dl~~~~~~~~~~~ 78 (164)
T 2pfi_A 10 SHHVRVEHFMNH--SITTLAKDTPLEEVVKVVTSTDVTEYPLVEST---------ESQILVGIVQRAQLVQALQAEPPSR 78 (164)
T ss_dssp CCSCBHHHHCBC--CCCCEETTCBHHHHHHHHHTCCCSEEEEESCT---------TTCBEEEEEEHHHHHHHHHC-----
T ss_pred ccCCCHHHHcCC--CCeEECCCCcHHHHHHHHHhCCCCceeEEecC---------CCCEEEEEEEHHHHHHHHHhhcccc
Confidence 456889999999 89999999999999999999999999999961 1189999999999987664321000
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCC------CceecCCCCHHHHHHHHHHcCCCEE
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTT------PYTVIESMSVAKAMVLFRQVGLRHL 403 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~------p~tV~~~~sL~~a~~lf~~~gl~~L 403 (447)
. ......+ +++|.+. +.++++++++.+|+++|.+.+.+++
T Consensus 79 ~--------~~~~~~v--------------------------~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l 124 (164)
T 2pfi_A 79 A--------PGHQQCL--------------------------QDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSL 124 (164)
T ss_dssp ----------CCCCBH--------------------------HHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEE
T ss_pred C--------Ccccchh--------------------------hhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEE
Confidence 0 0001122 2233333 7899999999999999999999999
Q ss_pred EEEeCcccCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 404 LVVPKYEAAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 404 pVVd~~~~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
||+|+ |+++|+||++|+++++.+..
T Consensus 125 pVvd~------g~l~Giit~~dil~~~~~~~ 149 (164)
T 2pfi_A 125 FVTSR------GRAVGCVSWVEMKKAISNLT 149 (164)
T ss_dssp EEEET------TEEEEEEEHHHHHHHHHHHH
T ss_pred EEEEC------CEEEEEEEHHHHHHHHHhhh
Confidence 99984 57999999999999888754
No 39
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.69 E-value=3.2e-17 Score=144.64 Aligned_cols=121 Identities=19% Similarity=0.292 Sum_probs=101.1
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+...+|+|+|++..+++++++++++.++++.|.+++++.+||+|++ .++++|+|+.+|+...+...
T Consensus 35 l~~~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~~----------~~~lvGivt~~dl~~~~~~~---- 100 (156)
T 3oi8_A 35 FSDLEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGED----------KDEVLGILHAKDLLKYMFNP---- 100 (156)
T ss_dssp HTTCBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESSS----------TTCEEEEEEGGGGGGGSSCG----
T ss_pred cCCCCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcCC----------CCcEEEEEEHHHHHHHHHcC----
Confidence 5678999999864368899999999999999999999999999875 14899999999996532110
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
...+++++|.+ ++++++++++.+|+++|.+.+.+++||+|+
T Consensus 101 -------------------------------------~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~- 141 (156)
T 3oi8_A 101 -------------------------------------EQFHLKSILRP-AVFVPEGKSLTALLKEFREQRNHMAIVIDE- 141 (156)
T ss_dssp -------------------------------------GGCCHHHHCBC-CCEEETTSBHHHHHHHHHHTTCCEEEEECT-
T ss_pred -------------------------------------CcccHHHHcCC-CEEECCCCCHHHHHHHHHhcCCeEEEEECC-
Confidence 01235566754 889999999999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHH
Q 013262 410 EAAGVSPVVGILTRQDLR 427 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl 427 (447)
+|+++|+||++|++
T Consensus 142 ----~g~~~Givt~~Dil 155 (156)
T 3oi8_A 142 ----YGGTSGLVTFEDII 155 (156)
T ss_dssp ----TSSEEEEEEHHHHC
T ss_pred ----CCCEEEEEEHHHhc
Confidence 57899999999985
No 40
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.68 E-value=1.3e-16 Score=139.76 Aligned_cols=129 Identities=13% Similarity=0.190 Sum_probs=105.6
Q ss_pred CcccccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhh
Q 013262 247 EPWMRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKW 326 (447)
Q Consensus 247 ~~~l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~ 326 (447)
...+++++++++ + +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+....
T Consensus 17 ~~~l~~~~v~~~--~--~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~~-----------~~~vGivt~~dl~~~~~~~~ 81 (152)
T 2uv4_A 17 SKSLEELQIGTY--A--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-----------GRVVDIYSKFDVINLAAEKT 81 (152)
T ss_dssp TSBHHHHTCSBC--S--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------SBEEEEEEHHHHHHHHHCSS
T ss_pred HhhHHHccCCcc--C--CceEeCCCCcHHHHHHHHHHcCCceEeEECCC-----------CcEEEEEeHHHHHHHhcchh
Confidence 345678899998 5 78899999999999999999999999999986 89999999999987654321
Q ss_pred hhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCcccccc------CCCceecCCCCHHHHHHHHHHcCC
Q 013262 327 FLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN------TTPYTVIESMSVAKAMVLFRQVGL 400 (447)
Q Consensus 327 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~------~~p~tV~~~~sL~~a~~lf~~~gl 400 (447)
+.. ...+++++|+ +++.++.+++++.+++++|.+.+.
T Consensus 82 ~~~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~ 124 (152)
T 2uv4_A 82 YNN-------------------------------------LDVSVTKALQHRSHYFEGVLKCYLHETLETIINRLVEAEV 124 (152)
T ss_dssp CCC-------------------------------------TTSBGGGGGGTCCHHHHTCSEECTTSBHHHHHHHHHHHTC
T ss_pred hhh-------------------------------------hcchHHHHHhhhhcccCCCeEECCCCcHHHHHHHHHHcCC
Confidence 000 0112444554 788999999999999999999999
Q ss_pred CEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 401 RHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 401 ~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+++||+|+ +|+++|+||++|+++++.+
T Consensus 125 ~~lpVvd~-----~g~~vGiit~~dil~~l~~ 151 (152)
T 2uv4_A 125 HRLVVVDE-----NDVVKGIVSLSDILQALVL 151 (152)
T ss_dssp SEEEEECT-----TSBEEEEEEHHHHHHHHC-
T ss_pred eEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 99999997 5789999999999987653
No 41
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.68 E-value=5.6e-17 Score=138.45 Aligned_cols=126 Identities=17% Similarity=0.309 Sum_probs=103.2
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHH-HHHhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVL-ALKKKWFL 328 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~-~L~~~~~~ 328 (447)
+...+|+|+|.+ ++.++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+.. ++....
T Consensus 5 ~~~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~-- 69 (133)
T 1y5h_A 5 FTMTTARDIMNA--GVTCVGEHETLTAAAQYMREHDIGALPICGDD-----------DRLHGMLTDRDIVIKGLAAGL-- 69 (133)
T ss_dssp ---CCHHHHSEE--TCCCEETTSBHHHHHHHHHHHTCSEEEEECGG-----------GBEEEEEEHHHHHHTTGGGTC--
T ss_pred hhhcCHHHHhcC--CceEeCCCCCHHHHHHHHHHhCCCeEEEECCC-----------CeEEEEEeHHHHHHHHHhcCC--
Confidence 445789999998 88999999999999999999999999999876 89999999999973 322110
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
. ....+++++|.+++.++++++++.+++++|.+.+.+++||+|+
T Consensus 70 ---------~---------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~ 113 (133)
T 1y5h_A 70 ---------D---------------------------PNTATAGELARDSIYYVDANASIQEMLNVMEEHQVRRVPVISE 113 (133)
T ss_dssp ---------C---------------------------TTTSBHHHHHTTCCCCEETTCCHHHHHHHHHHHTCSEEEEEET
T ss_pred ---------C---------------------------ccccCHHHHhcCCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC
Confidence 0 0112456677788999999999999999999999999999984
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHh
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
|+++|+||++|+++++.+
T Consensus 114 ------g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 114 ------HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp ------TEEEEEEEHHHHHHTCC-
T ss_pred ------CEEEEEEEHHHHHHHHHh
Confidence 579999999999987543
No 42
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.67 E-value=3.1e-16 Score=141.98 Aligned_cols=126 Identities=18% Similarity=0.212 Sum_probs=108.0
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
.++|+|+|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+||+..+.... .
T Consensus 8 ~~~v~~im~~--~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~~-----------g~~vGivt~~dl~~~~~~~~----~ 70 (184)
T 1pvm_A 8 FMRVEKIMNS--NFKTVNWNTTVFDAVKIMNENHLYGLVVKDDN-----------GNDVGLLSERSIIKRFIPRN----K 70 (184)
T ss_dssp CCBGGGTSBT--TCCEEETTCBHHHHHHHHHHHTCCEEEEECTT-----------SCEEEEEEHHHHHHHTGGGC----C
T ss_pred ccCHHHhcCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHHHhhcc----c
Confidence 3789999998 89999999999999999999999999999876 89999999999976543210 0
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
.....+++++|.++++++.+++++.+|+++|.+.+.+++||+|+
T Consensus 71 ---------------------------------~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~--- 114 (184)
T 1pvm_A 71 ---------------------------------KPDEVPIRLVMRKPIPKVKSDYDVKDVAAYLSENGLERCAVVDD--- 114 (184)
T ss_dssp ---------------------------------CGGGSBGGGTSBSSCCEEETTCBHHHHHHHHHHHTCSEEEEECT---
T ss_pred ---------------------------------CcccCCHHHHhCCCCcEECCCCCHHHHHHHHHHcCCcEEEEEcC---
Confidence 00123577889889999999999999999999999999999987
Q ss_pred CCCCcEEEEEeHHHHHHHHHh
Q 013262 412 AGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~~ 432 (447)
+|+++|+||++|+++++.+
T Consensus 115 --~g~~~Givt~~dll~~~~~ 133 (184)
T 1pvm_A 115 --PGRVVGIVTLTDLSRYLSR 133 (184)
T ss_dssp --TCCEEEEEEHHHHTTTSCH
T ss_pred --CCeEEEEEEHHHHHHHHHh
Confidence 5689999999999987665
No 43
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.66 E-value=3.3e-16 Score=137.73 Aligned_cols=130 Identities=18% Similarity=0.229 Sum_probs=107.3
Q ss_pred ccccccccCC----CCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 253 LTVGELIDAK----PPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 253 l~v~diM~~~----~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
.+|+|+|.+. .+++++++++++.++++.|.+++++.+||++ + ++++|+|+.+|+.+.+......
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~V~~-~-----------~~~~Givt~~dl~~~~~~~~~~ 74 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVYDAIKLMAEKGIGALLVVD-G-----------DDIAGIVTERDYARKVVLQERS 74 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHHHHHHHHHHHTCSEEEEES-S-----------SSEEEEEEHHHHHHHSGGGTCC
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHHHHHHHHHHcCCCEEEEee-C-----------CEEEEEEEHHHHHHHHHhccCC
Confidence 5799999952 2678999999999999999999999999965 4 8999999999998755331100
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
.....++++|.+++.++.+++++.+++++|.+.+.+++||+|+
T Consensus 75 -------------------------------------~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~ 117 (157)
T 4fry_A 75 -------------------------------------SKATRVEEIMTAKVRYVEPSQSTDECMALMTEHRMRHLPVLDG 117 (157)
T ss_dssp -------------------------------------SSSCBHHHHSBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEET
T ss_pred -------------------------------------ccccCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEEC
Confidence 0123466778889999999999999999999999999999984
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
|+++|+||++|+++++.++....
T Consensus 118 ------g~~~Giit~~dil~~l~~~~~~~ 140 (157)
T 4fry_A 118 ------GKLIGLISIGDLVKSVIADQQFT 140 (157)
T ss_dssp ------TEEEEEEEHHHHHHHHHTTCCCC
T ss_pred ------CEEEEEEEHHHHHHHHHHHHHhh
Confidence 57999999999999988765443
No 44
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.66 E-value=1.7e-16 Score=140.10 Aligned_cols=136 Identities=19% Similarity=0.132 Sum_probs=108.9
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+..++|+|+|.+..+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+||...+....-
T Consensus 11 l~~~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~dl~~~~~~~~~-- 77 (159)
T 1yav_A 11 LLEATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDPS-----------YRLHGLIGTNMIMNSIFGLER-- 77 (159)
T ss_dssp CTTCBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------CBEEEEEEHHHHHHHHBCSSS--
T ss_pred HhHhhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECCC-----------CCEEEEeEHHHHHHHhhhhcc--
Confidence 5568999999753357889999999999999999999999999987 899999999999876533100
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
+.. ......+++++|.+++.++.+++++.+|+++|.+.+. +||+|+
T Consensus 78 -------------~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~- 123 (159)
T 1yav_A 78 -------------IEF------------------EKLDQITVEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVEND- 123 (159)
T ss_dssp -------------BCG------------------GGTTTSBHHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECT-
T ss_pred -------------cch------------------hhhccCCHHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeC-
Confidence 000 0001235677888899999999999999999999877 999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhhhcC
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILTAFP 436 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~~~~ 436 (447)
+|+++|+||++|+++++.+...+
T Consensus 124 ----~g~~vGiit~~dil~~~~~~~~~ 146 (159)
T 1yav_A 124 ----EQVFEGIFTRRVVLKELNKHIRS 146 (159)
T ss_dssp ----TCBEEEEEEHHHHHHHHHHHC--
T ss_pred ----CCeEEEEEEHHHHHHHHHHHHHh
Confidence 57899999999999998876544
No 45
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.64 E-value=9.8e-16 Score=161.29 Aligned_cols=157 Identities=14% Similarity=0.152 Sum_probs=125.9
Q ss_pred hcCCchHHHHHHhhCCCCCCCCCCcccccccccccccCCCCeeEecCC-CCHHHHHHHHhcCCCCeEEEec-CCCCCCCC
Q 013262 224 SFNPSIYEIILELKGLPFLDAHPEPWMRTLTVGELIDAKPPVITLSGI-EKVSQIVDVLRNTTHNGFPVLD-EGVVPPSG 301 (447)
Q Consensus 224 ~l~~sIYd~~l~~kg~p~l~~~~~~~l~~l~v~diM~~~~~vv~l~~~-~tv~~~~~~L~~~~~~~fPVVd-~~~~~~~~ 301 (447)
++...+++.++..+++..........+...+|+|+|++ ++++++++ +++.+++++|.+++++.+||+| ++
T Consensus 355 yls~~~~~~~l~~rg~~~~~~~~~~~l~~~~V~diM~~--~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~~------ 426 (527)
T 3pc3_A 355 YMTKFVSDNWMEARNFKEPVNEHGHWWWSLAIAELELP--APPVILKSDATVGEAIALMKKHRVDQLPVVDQDD------ 426 (527)
T ss_dssp GTTTTTSHHHHHHTTSSCCCCTTCCTTTTSBGGGGCCC--CCSCCEETTCBHHHHHHHHHHHTCSEEEEECTTT------
T ss_pred hHhhhhcHHHHHhcCCccccccccccccCCcHHHhCcC--CCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECCC------
Confidence 33444567888888886554444556888999999998 89999999 9999999999999999999999 55
Q ss_pred CCCCCceEEEEEeHHHHHHHHHhhhhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCce
Q 013262 302 LANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYT 381 (447)
Q Consensus 302 ~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~t 381 (447)
++++|+|+.+||++.+..... ....+++++|++++++
T Consensus 427 -----g~lvGiVt~~Dll~~l~~~~~--------------------------------------~~~~~V~~im~~~~~~ 463 (527)
T 3pc3_A 427 -----GSVLGVVGQETLITQIVSMNR--------------------------------------QQSDPAIKALNKRVIR 463 (527)
T ss_dssp -----CCEEEEEEHHHHHHHHHHHCC--------------------------------------CTTSBGGGGEETTCCE
T ss_pred -----CEEEEEEEHHHHHHHHHhccC--------------------------------------cCCCcHHHHhcCCCeE
Confidence 899999999999876643110 0123577889999999
Q ss_pred ecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 382 VIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 382 V~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
|++++++.++.++|.+.++ +||||++ +.++++++||||++||++++.++.
T Consensus 464 v~~~~~l~~a~~~m~~~~~--~pVVd~~-~~~~g~lvGIVT~~Dll~~l~~~~ 513 (527)
T 3pc3_A 464 LNESEILGKLARVLEVDPS--VLILGKN-PAGKVELKALATKLDVTTFIAAGK 513 (527)
T ss_dssp EETTSBHHHHHHHHTTCSE--EEEEEEC-SSSCEEEEEEEEHHHHHHHHHTCC
T ss_pred ECCCCcHHHHHHHHhhCCE--EEEEeCC-cccCCeEEEEEEHHHHHHHHHhcc
Confidence 9999999999999987765 7999860 001278999999999999988754
No 46
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.63 E-value=1.4e-15 Score=144.08 Aligned_cols=163 Identities=15% Similarity=0.142 Sum_probs=106.9
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
..+|+|+|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+..|+.+.+....-....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-----------~~l~Giit~~di~~~~~~~~~~~~~ 72 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLKMAWNIMRDKNLKSIPVADGN-----------NHLLGMLSTSNITATYMDIWDSNIL 72 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHCCCCTTHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHhhhhhhh
Confidence 4689999998 89999999999999999999999999999987 8999999999999877542100000
Q ss_pred --ccchhhhhhh-----------------------cchHHHHhhh----------------------cc---------cc
Q 013262 332 --RRTEEWEVRE-----------------------KFSWVELAER----------------------EG---------KI 355 (447)
Q Consensus 332 --~~~~~~~~~~-----------------------~~~~~d~~~~----------------------~~---------~~ 355 (447)
....-.+... ......+.+. +. .+
T Consensus 73 ~~~~~~~~~v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~ 152 (245)
T 3l2b_A 73 AKSATSLDNILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTP 152 (245)
T ss_dssp HHTTCCHHHHHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCC
T ss_pred hhccCCHHHHHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCC
Confidence 0000000000 0000000000 00 00
Q ss_pred -------------------cccccchhhhhhccCcccccc-CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCC
Q 013262 356 -------------------EEVAVTSEEMEMYIDLHPLTN-TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVS 415 (447)
Q Consensus 356 -------------------~~~~l~~~~~~~~idl~~im~-~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~ 415 (447)
.+.............++++|+ +++.++++++++.+++++|.+.+++++||+|+ +|
T Consensus 153 ~~~v~~~a~~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~-----~~ 227 (245)
T 3l2b_A 153 SKEIIELAKKNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDE-----NN 227 (245)
T ss_dssp CHHHHHHHHHHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECT-----TC
T ss_pred CHHHHHHHHHcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcC-----CC
Confidence 000000011123456889999 89999999999999999999999999999997 57
Q ss_pred cEEEEEeHHHHHHHHHh
Q 013262 416 PVVGILTRQDLRAFNIL 432 (447)
Q Consensus 416 ~lvGIITr~DLl~~~~~ 432 (447)
+++|+||++|++++..+
T Consensus 228 ~~~Giit~~dll~~~~~ 244 (245)
T 3l2b_A 228 KVVGSIARFHLISTHKK 244 (245)
T ss_dssp BEEEEEECC--------
T ss_pred eEEEEEEHHHhhchhhc
Confidence 89999999999987654
No 47
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.62 E-value=1.2e-15 Score=148.18 Aligned_cols=127 Identities=17% Similarity=0.142 Sum_probs=107.7
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcC-----CCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKK 325 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~-----~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~ 325 (447)
...+|+++|++ +++++++++++.++++.|+++ +++.+||+|++ ++++|+|+.+|++...
T Consensus 135 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~pVvd~~-----------~~lvGivt~~dll~~~--- 198 (286)
T 2oux_A 135 EDETAGAIMTT--EFVSIVANQTVRSAMYVLKNQADMAETIYYVYVVDQE-----------NHLVGVISLRDLIVND--- 198 (286)
T ss_dssp CTTBHHHHCBS--CCCEECSSSBHHHHHHHHHHHCSSCSCCSEEEEECTT-----------CBEEEEEEHHHHTTSC---
T ss_pred ChHHHHHhCCC--CceEECCCCcHHHHHHHHHHcccCccceeEEEEEcCC-----------CeEEEEEEHHHHHcCC---
Confidence 45789999999 999999999999999999987 78889999986 8999999999985310
Q ss_pred hhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEE
Q 013262 326 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 405 (447)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpV 405 (447)
....++++|++++++|++++++.+|+++|.+++++++||
T Consensus 199 -----------------------------------------~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpV 237 (286)
T 2oux_A 199 -----------------------------------------DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPV 237 (286)
T ss_dssp -----------------------------------------TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEE
T ss_pred -----------------------------------------CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEE
Confidence 012356678889999999999999999999999999999
Q ss_pred EeCcccCCCCcEEEEEeHHHHHHHHHhhhcCccc
Q 013262 406 VPKYEAAGVSPVVGILTRQDLRAFNILTAFPHLE 439 (447)
Q Consensus 406 Vd~~~~~g~~~lvGIITr~DLl~~~~~~~~~~~~ 439 (447)
||+ +|+++|+||++|+++.+.++..+...
T Consensus 238 Vd~-----~g~lvGiIT~~Dil~~i~~e~~ed~~ 266 (286)
T 2oux_A 238 TDY-----DDHLLGIVTVDDIIDVIDDEAASDYS 266 (286)
T ss_dssp ECT-----TCBEEEEEEHHHHHHHHHHHHHC---
T ss_pred EcC-----CCeEEEEEEHHHHHHHHHHHhHHHHH
Confidence 997 57899999999999998876554443
No 48
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.61 E-value=2e-15 Score=140.33 Aligned_cols=119 Identities=16% Similarity=0.153 Sum_probs=104.7
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+++++|.+ +++++++++++.+++++|.+++++++||+|++ ++++|+|+.+|+...+.
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-----------~~l~Givt~~dl~~~~~--------- 70 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVRECLHRMRQYQTNECIVKDRE-----------GHFRGVVNKEDLLDLDL--------- 70 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHHHHHHHHHHTTSSEEEEECTT-----------SBEEEEEEGGGGTTSCT---------
T ss_pred cCHHHhhcC--CCeEECCCCcHHHHHHHHHHCCCCEEEEEcCC-----------CEEEEEEEHHHHHhhcC---------
Confidence 578999999 99999999999999999999999999999976 89999999998843110
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
...++++|.++++++++++++.+|+++|.+.+.+++||+|+
T Consensus 71 -----------------------------------~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~---- 111 (213)
T 1vr9_A 71 -----------------------------------DSSVFNKVSLPDFFVHEEDNITHALLLFLEHQEPYLPVVDE---- 111 (213)
T ss_dssp -----------------------------------TSBSGGGCBCTTCCEETTSBHHHHHHHHHHCCCSEEEEECT----
T ss_pred -----------------------------------CCcHHHHccCCCEEECCCCcHHHHHHHHHHhCCCEEEEEcC----
Confidence 12467788899999999999999999999999999999987
Q ss_pred CCCcEEEEEeHHHHHHHHHhh
Q 013262 413 GVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 413 g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++.+...
T Consensus 112 -~g~lvGiit~~Dil~~~~~~ 131 (213)
T 1vr9_A 112 -EMRLKGAVSLHDFLEALIEA 131 (213)
T ss_dssp -TCBEEEEEEHHHHHHHHHHS
T ss_pred -CCEEEEEEEHHHHHHHHHHH
Confidence 57899999999999987653
No 49
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.61 E-value=2e-15 Score=146.52 Aligned_cols=136 Identities=18% Similarity=0.178 Sum_probs=112.9
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
..+++++|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+++|++..+.... ..
T Consensus 155 ~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~-~~-- 218 (296)
T 3ddj_A 155 IFPVKVFMST--KVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDD-----------NKVVGIVTVVNAIKQLAKAV-DK-- 218 (296)
T ss_dssp CCBHHHHSBC--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHHHHH-HH--
T ss_pred cccHHHhhcC--CCeEECCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHHH-hh--
Confidence 4589999998 89999999999999999999999999999976 89999999999988765321 00
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
+.. +.....++.++|+++++++.+++++.+|+++|.+.+.+++||+|+
T Consensus 219 -----------~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~--- 266 (296)
T 3ddj_A 219 -----------LDP------------------DYFYGKVVKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNK--- 266 (296)
T ss_dssp -----------TCT------------------HHHHTCBHHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECT---
T ss_pred -----------cCh------------------hhhcCcCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECC---
Confidence 000 001224567788899999999999999999999999999999997
Q ss_pred CCCCcEEEEEeHHHHHHHHHhhhcCc
Q 013262 412 AGVSPVVGILTRQDLRAFNILTAFPH 437 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~~~~~~~ 437 (447)
+|+++|+||++|+++++.++...+
T Consensus 267 --~g~~~Giit~~Dil~~l~~~~~~~ 290 (296)
T 3ddj_A 267 --DNTIRGIITERDLLIALHHILVME 290 (296)
T ss_dssp --TSCEEEEEEHHHHHHHHHHHHHHH
T ss_pred --CCeEEEEEcHHHHHHHHHHHhcch
Confidence 578999999999999988765433
No 50
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.61 E-value=3.6e-15 Score=144.20 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=104.5
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcC-----CCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKK 325 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~-----~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~ 325 (447)
...+|+++|++ +++++++++++.++++.++++ +++.+||+|++ ++++|+|+.+|++.. .
T Consensus 133 ~~~~v~~iM~~--~~~~v~~~~tv~ea~~~~~~~~~~~~~~~~~~Vvd~~-----------~~lvGivt~~dll~~--~- 196 (278)
T 2yvy_A 133 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-----------GRLKGVLSLRDLIVA--D- 196 (278)
T ss_dssp CTTBGGGTCBS--CCCEECTTSBHHHHHHHHHHHTTTCSCSSEEEEECTT-----------CBEEEEEEHHHHHHS--C-
T ss_pred CcchHHhhcCC--CceEECCCCcHHHHHHHHHHccCCccceeEEEEECCC-----------CCEEEEEEHHHHhcC--C-
Confidence 35689999999 999999999999999999886 67999999986 899999999998641 0
Q ss_pred hhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEE
Q 013262 326 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 405 (447)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpV 405 (447)
...+++++|++++++|++++++.+|+++|.+.+.+.+||
T Consensus 197 -----------------------------------------~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpV 235 (278)
T 2yvy_A 197 -----------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPV 235 (278)
T ss_dssp -----------------------------------------TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEE
T ss_pred -----------------------------------------CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEE
Confidence 013577889899999999999999999999999999999
Q ss_pred EeCcccCCCCcEEEEEeHHHHHHHHHhhhcCccc
Q 013262 406 VPKYEAAGVSPVVGILTRQDLRAFNILTAFPHLE 439 (447)
Q Consensus 406 Vd~~~~~g~~~lvGIITr~DLl~~~~~~~~~~~~ 439 (447)
||+ +|+++|+||++|+++.+.++..+...
T Consensus 236 vd~-----~g~lvGivT~~Dil~~i~~e~~ed~~ 264 (278)
T 2yvy_A 236 VDE-----EGRLVGIVTVDDVLDVLEAEATEDIH 264 (278)
T ss_dssp ECT-----TSBEEEEEEHHHHHHHC---------
T ss_pred EeC-----CCeEEEEEEHHHHHHHHHHHhHHHHH
Confidence 997 57899999999999988776554443
No 51
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.59 E-value=6.8e-15 Score=144.60 Aligned_cols=127 Identities=17% Similarity=0.284 Sum_probs=106.4
Q ss_pred ccccccc---ccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 252 TLTVGEL---IDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 252 ~l~v~di---M~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
..+++++ |.+ +++++++++++.++.+.|.+++++.+||+|++ |+++|+|+++|+++++......
T Consensus 186 ~~~v~~~~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~~-----------~~~~Giit~~dl~~~~~~~~~~ 252 (323)
T 3t4n_C 186 KIPIGDLNIITQD--NMKSCQMTTPVIDVIQMLTQGRVSSVPIIDEN-----------GYLINVYEAYDVLGLIKGGIYN 252 (323)
T ss_dssp CSBGGGTTCSBCT--TCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEETTHHHHHHHTTHHH
T ss_pred hCcHHHcCCCCCC--CcEEECCCCcHHHHHHHHHHcCCCEEEEECCC-----------CeEEEEEeHHHHHHHHhhchhh
Confidence 4578999 887 89999999999999999999999999999987 8999999999999876542110
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccC------CCceecCCCCHHHHHHHHHHcCCCE
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT------TPYTVIESMSVAKAMVLFRQVGLRH 402 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~------~p~tV~~~~sL~~a~~lf~~~gl~~ 402 (447)
. ...+++++|++ +++++++++++.+++++|.+.+.++
T Consensus 253 ~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~ 295 (323)
T 3t4n_C 253 D-------------------------------------LSLSVGEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHR 295 (323)
T ss_dssp H-------------------------------------TTSBHHHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCE
T ss_pred h-------------------------------------ccCCHHHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCE
Confidence 0 01223344544 6889999999999999999999999
Q ss_pred EEEEeCcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 403 LLVVPKYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 403 LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+||+|+ +|+++|+||++|+++++..+
T Consensus 296 l~Vvd~-----~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 296 FFVVDD-----VGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp EEEECT-----TSBEEEEEEHHHHHHHHHHC
T ss_pred EEEECC-----CCcEEEEEEHHHHHHHHHhc
Confidence 999997 57899999999999988753
No 52
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.56 E-value=5.8e-15 Score=141.92 Aligned_cols=149 Identities=14% Similarity=0.125 Sum_probs=106.1
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHH------HHHHhh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLV------LALKKK 325 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~------~~L~~~ 325 (447)
..+++++|.+ +++++++++++.++.+.|.+++++.+||+|++ ++++|+|+.+|++ +.+...
T Consensus 125 ~~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~~~~ 191 (282)
T 2yzq_A 125 GVEIEPYYQR--YVSIVWEGTPLKAALKALLLSNSMALPVVDSE-----------GNLVGIVDETDLLRDSEIVRIMKST 191 (282)
T ss_dssp GCBSTTTSBS--CCCCEETTSBHHHHHHHHHTCSSSEEEEECTT-----------SCEEEEEEGGGGGGCGGGCC-----
T ss_pred cCcHHHHhCC--CCEEECCCCCHHHHHHHHHHcCCcEEEEEcCC-----------CeEEEEEEHHHHhhhhhhhhhhccc
Confidence 5678999988 88999999999999999999999999999976 8999999999997 322100
Q ss_pred hhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEE
Q 013262 326 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 405 (447)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpV 405 (447)
.....+. .. ... .....++.. .........+++++|+++++++++++++.+|+++|.+.+++++||
T Consensus 192 ~~~~~~~--~~-~~~-~~~~~~~~~----------~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpV 257 (282)
T 2yzq_A 192 ELAASSE--EE-WIL-ESHPTLLFE----------KFELQLPNKPVAEIMTRDVIVATPHMTVHEVALKMAKYSIEQLPV 257 (282)
T ss_dssp -----------------------------------------CCCBGGGTCBSSCCCBCTTSBHHHHHHHHHHHTCSEEEE
T ss_pred hhhhhhh--hh-hhc-ccchHHHHh----------HhhhhhccCCHHHhcCCCCceeCCCCCHHHHHHHHHHcCcceeEE
Confidence 0000000 00 000 000000000 000011245688999999999999999999999999999999999
Q ss_pred EeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 406 VPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 406 Vd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+|+ +|+++|+||++|+++++.+
T Consensus 258 vd~-----~~~lvGiit~~Dil~~~~~ 279 (282)
T 2yzq_A 258 IRG-----EGDLIGLIRDFDLLKVLVK 279 (282)
T ss_dssp EET-----TTEEEEEEEHHHHGGGGCC
T ss_pred ECC-----CCCEEEEEeHHHHHHHHHh
Confidence 997 5689999999999987654
No 53
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.56 E-value=9.8e-15 Score=139.92 Aligned_cols=132 Identities=16% Similarity=0.239 Sum_probs=106.4
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+++++|.+ ++.++++++++.++++.|.+++++.+||+ ++ ++++|+|+.+|+++.+...+.....
T Consensus 148 ~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~-----------~~~~Givt~~dl~~~~~~~~~~~~~- 212 (280)
T 3kh5_A 148 EVIDDYITR--DVIVATPGERLKDVARTMVRNGFRRLPVV-SE-----------GRLVGIITSTDFIKLLGSDWAFNHM- 212 (280)
T ss_dssp CBSGGGCBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ET-----------TEEEEEEEHHHHHHHHTSHHHHHHH-
T ss_pred CCHHHHhCC--CCeEECCCCcHHHHHHHHHHcCCCEEEEE-EC-----------CEEEEEEEHHHHHHHHhhhhhhhhh-
Confidence 478999998 88999999999999999999999999999 44 8999999999998876542211000
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
..... ......+++++|.++++++++++++.+|+++|.+.+.+++||+|+
T Consensus 213 --------~~~~~------------------~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~---- 262 (280)
T 3kh5_A 213 --------QTGNV------------------REITNVRMEEIMKRDVITAKEGDKLKKIAEIMVTNDIGALPVVDE---- 262 (280)
T ss_dssp --------HSCCT------------------HHHHHCBHHHHSBSSCCCBCTTCBHHHHHHHHHHHTCCEEEEECT----
T ss_pred --------cccch------------------hhhhCCcHHHHhcCCCEEECCCCCHHHHHHHHHHCCCCEEEEECC----
Confidence 00000 001224577888899999999999999999999999999999997
Q ss_pred CCCcEEEEEeHHHHHHHH
Q 013262 413 GVSPVVGILTRQDLRAFN 430 (447)
Q Consensus 413 g~~~lvGIITr~DLl~~~ 430 (447)
+|+++|+||++|+++++
T Consensus 263 -~g~~~Givt~~dil~~l 279 (280)
T 3kh5_A 263 -NLRIKGIITEKDVLKYF 279 (280)
T ss_dssp -TCBEEEEEEHHHHGGGG
T ss_pred -CCeEEEEEeHHHHHHhh
Confidence 56899999999998764
No 54
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.53 E-value=2.5e-14 Score=138.78 Aligned_cols=122 Identities=17% Similarity=0.240 Sum_probs=105.7
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+.+++++|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+...+....
T Consensus 92 ~~~v~~im~~--~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~~-----------~~lvGivt~~dl~~~~~~~~----- 153 (296)
T 3ddj_A 92 TTPIIDYMTP--NPVTVYNTSDEFTAINIMVTRNFGSLPVVDIN-----------DKPVGIVTEREFLLLYKDLD----- 153 (296)
T ss_dssp TSBGGGTSEE--SCCCEETTSCHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHGGGGGGSC-----
T ss_pred cccHHHhccC--CCEEEcCCCCHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEeHHHHHHhhhccc-----
Confidence 5679999999 89999999999999999999999999999886 89999999999965432110
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
....++++|.+++.++.+++++.+++++|.+.+.+++||+|+
T Consensus 154 -----------------------------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~--- 195 (296)
T 3ddj_A 154 -----------------------------------EIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDD--- 195 (296)
T ss_dssp -----------------------------------CCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECT---
T ss_pred -----------------------------------ccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC---
Confidence 012456678888999999999999999999999999999997
Q ss_pred CCCCcEEEEEeHHHHHHHHH
Q 013262 412 AGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~ 431 (447)
+|+++|+||++|++++..
T Consensus 196 --~~~~~Givt~~dl~~~~~ 213 (296)
T 3ddj_A 196 --DNKVVGIVTVVNAIKQLA 213 (296)
T ss_dssp --TSCEEEEEEHHHHHHHHH
T ss_pred --CCEEEEEEEHHHHHHHHH
Confidence 568999999999998876
No 55
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.53 E-value=8.2e-14 Score=133.45 Aligned_cols=122 Identities=20% Similarity=0.254 Sum_probs=106.1
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+.+++++|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+++.+|+.+.+.....
T Consensus 83 ~~~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~-----------~~~~Givt~~dl~~~~~~~~~---- 145 (280)
T 3kh5_A 83 NEPVREIMEE--NVITLKENADIDEAIETFLTKNVGGAPIVNDE-----------NQLISLITERDVIRALLDKID---- 145 (280)
T ss_dssp TSBGGGTSBC--SCCCEETTCBHHHHHHHHHHTTCSEEEEECTT-----------CBEEEEEEHHHHHHHHGGGSC----
T ss_pred hhhHHHhcCC--CCEEECCCCCHHHHHHHHHhCCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHhhcCC----
Confidence 4689999998 89999999999999999999999999999887 899999999999876543110
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCccc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEA 411 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~ 411 (447)
...+++++|.+++.++++++++.++++.|.+.+.+++||++
T Consensus 146 -----------------------------------~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv~---- 186 (280)
T 3kh5_A 146 -----------------------------------ENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVVS---- 186 (280)
T ss_dssp -----------------------------------TTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEEE----
T ss_pred -----------------------------------CCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEE----
Confidence 11246678888999999999999999999999999999995
Q ss_pred CCCCcEEEEEeHHHHHHHHH
Q 013262 412 AGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 412 ~g~~~lvGIITr~DLl~~~~ 431 (447)
+|+++|+||++|++++..
T Consensus 187 --~~~~~Givt~~dl~~~~~ 204 (280)
T 3kh5_A 187 --EGRLVGIITSTDFIKLLG 204 (280)
T ss_dssp --TTEEEEEEEHHHHHHHHT
T ss_pred --CCEEEEEEEHHHHHHHHh
Confidence 467999999999998864
No 56
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.52 E-value=6.1e-14 Score=145.51 Aligned_cols=122 Identities=20% Similarity=0.214 Sum_probs=106.2
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcC-----CCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNT-----THNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKK 325 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~-----~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~ 325 (447)
...+|+++|++ ++++++++++++++.+.++++ +++.+||+|++ ++++|+|+.+|++.. .
T Consensus 153 ~~~~v~~iM~~--~~v~v~~~~tv~ea~~~~~~~~~~~~~~~~ipVvd~~-----------~~lvGiVt~~Dll~~--~- 216 (473)
T 2zy9_A 153 EEDEAGGLMTP--EYVAVREGMTVEEVLRFLRRAAPDAETIYYIYVVDEK-----------GRLKGVLSLRDLIVA--D- 216 (473)
T ss_dssp CTTBSTTTCBS--CEEEECTTCBHHHHHHHHHHHGGGCSEEEEEEEECTT-----------SBEEEEEEHHHHHHS--C-
T ss_pred CCCCHHHhCCC--CceEeCCCCcHHHHHHHHHhccCCcCceeEEEEECCC-----------CcEEEEEEHHHHhcC--C-
Confidence 35689999999 999999999999999999876 46899999986 899999999998641 0
Q ss_pred hhhhhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEE
Q 013262 326 WFLQEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLV 405 (447)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpV 405 (447)
...+++++|++++++++++++++++.++|++++.+.+||
T Consensus 217 -----------------------------------------~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpV 255 (473)
T 2zy9_A 217 -----------------------------------------PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPV 255 (473)
T ss_dssp -----------------------------------------TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEE
T ss_pred -----------------------------------------CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEE
Confidence 013477889899999999999999999999999999999
Q ss_pred EeCcccCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 406 VPKYEAAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 406 Vd~~~~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
||+ +|+++|+||++|+++...++.
T Consensus 256 VDe-----~g~lvGiIT~~Dil~~i~~e~ 279 (473)
T 2zy9_A 256 VDE-----EGRLVGIVTVDDVLDVLEAEA 279 (473)
T ss_dssp ECT-----TSBEEEEEEHHHHHHHHHHHH
T ss_pred EcC-----CCEEEEEEehHhhHHHHHHHh
Confidence 997 578999999999999876643
No 57
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.52 E-value=7.1e-14 Score=137.92 Aligned_cols=128 Identities=13% Similarity=0.146 Sum_probs=105.4
Q ss_pred cccccc---cccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhh
Q 013262 252 TLTVGE---LIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFL 328 (447)
Q Consensus 252 ~l~v~d---iM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~ 328 (447)
..++++ +|.+ ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+++|++..+....+.
T Consensus 181 ~~~v~~l~~~m~~--~~~~v~~~~~~~~~~~~m~~~~~~~~~Vvd~~-----------~~~~Giit~~dl~~~~~~~~~~ 247 (334)
T 2qrd_G 181 RVPLNQMTIGTWS--NLATASMETKVYDVIKMLAEKNISAVPIVNSE-----------GTLLNVYESVDVMHLIQDGDYS 247 (334)
T ss_dssp CCBGGGSSCSBCS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEETHHHHHHHTTSCGG
T ss_pred hCcHHHhCCcccC--CceEECCCCcHHHHHHHHHHcCCcEEEEEcCC-----------CcEEEEEEHHHHHHHhhccccc
Confidence 456788 5888 88999999999999999999999999999976 8999999999998766432100
Q ss_pred hhcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCcccccc------CCCceecCCCCHHHHHHHHHHcCCCE
Q 013262 329 QEKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN------TTPYTVIESMSVAKAMVLFRQVGLRH 402 (447)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~------~~p~tV~~~~sL~~a~~lf~~~gl~~ 402 (447)
. ...++.++|. ++++++++++++.+|+++|.+.+.++
T Consensus 248 ~-------------------------------------~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~ 290 (334)
T 2qrd_G 248 N-------------------------------------LDLSVGEALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHR 290 (334)
T ss_dssp G-------------------------------------GGSBHHHHHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCE
T ss_pred c-------------------------------------ccCcHHHHHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCE
Confidence 0 0112344555 47889999999999999999999999
Q ss_pred EEEEeCcccCCCCcEEEEEeHHHHHHHHHhhh
Q 013262 403 LLVVPKYEAAGVSPVVGILTRQDLRAFNILTA 434 (447)
Q Consensus 403 LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~~ 434 (447)
+||+|+ +|+++|+||++|+++++.++.
T Consensus 291 l~Vvd~-----~g~l~Giit~~dil~~~~~~~ 317 (334)
T 2qrd_G 291 LFVVDE-----NLKLEGILSLADILNYIIYDK 317 (334)
T ss_dssp EEEECT-----TCBEEEEEEHHHHHHHHHSCC
T ss_pred EEEECC-----CCeEEEEEeHHHHHHHHHhcc
Confidence 999997 578999999999999887654
No 58
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.47 E-value=4.5e-14 Score=135.66 Aligned_cols=117 Identities=21% Similarity=0.278 Sum_probs=87.1
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
++|+|+|.+ +++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|++..+.
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~~a~~~~~~~~~~~~pV~d~~-----------~~~~Giv~~~dl~~~~~--------- 58 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRNYALELFKKYKVRSFPVVNKE-----------GKLVGIISVKRILVNPD--------- 58 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC------------CCEEEEECTT-----------CCEEEEEESSCC--------------
T ss_pred CchHHhccC--CCeEECCCCcHHHHHHHHHHcCCCeEEEEcCC-----------CcEEEEEEHHHHHhhhc---------
Confidence 478999998 89999999999999999999999999999976 89999999999864321
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccC
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAA 412 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~ 412 (447)
...++++|.+.+.++++++++.++++.|.+.+.+.+||+|+
T Consensus 59 -----------------------------------~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~---- 99 (282)
T 2yzq_A 59 -----------------------------------EEQLAMLVKRDVPVVKENDTLKKAAKLMLEYDYRRVVVVDS---- 99 (282)
T ss_dssp ----------------------------------------CCCBSCCCEEETTSBHHHHHHHHHHHTCSEEEEECT----
T ss_pred -----------------------------------cCCHHHHcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC----
Confidence 02356778888899999999999999999999999999987
Q ss_pred CCCcEEEEEeHHHHHH-HHH
Q 013262 413 GVSPVVGILTRQDLRA-FNI 431 (447)
Q Consensus 413 g~~~lvGIITr~DLl~-~~~ 431 (447)
+|+++|+||++|+++ ++.
T Consensus 100 -~~~~~Giit~~di~~~~~~ 118 (282)
T 2yzq_A 100 -KGKPVGILTVGDIIRRYFA 118 (282)
T ss_dssp -TSCEEEEEEHHHHHHHTTT
T ss_pred -CCEEEEEEEHHHHHHHHHh
Confidence 467999999999998 554
No 59
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.46 E-value=6.9e-13 Score=130.70 Aligned_cols=147 Identities=14% Similarity=0.111 Sum_probs=109.8
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
+.+.+|+|+|.+..+++++++++++.++++.|.+++++.+||++++ .++++|+|+.+|++..+.......
T Consensus 32 l~~~~v~dim~p~~~v~~v~~~~~v~~a~~~~~~~~~~~~pV~d~~----------~~~~vGivt~~Dll~~l~~~~~~~ 101 (330)
T 2v8q_E 32 MKSHRCYDLIPTSSKLVVFDTSLQVKKAFFALVTNGVRAAPLWDSK----------KQSFVGMLTITDFINILHRYYKSA 101 (330)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSEEEEEETT----------TTEEEEEEEHHHHHHHHHHHHHHH
T ss_pred HHcCcHhhhccCCCcEEEEeCCCcHHHHHHHHHHcCCcEEEEEeCC----------CCeEEEEEEHHHHHHHHHHHHhcc
Confidence 5678999999432289999999999999999999999999999875 168999999999988664311000
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
+.. ... .......++. -.+.++|.++++++++++++.+++++|.+.+.+++||+|+
T Consensus 102 ~~~---~~~-l~~~~~~~~~-------------------~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~- 157 (330)
T 2v8q_E 102 LVQ---IYE-LEEHKIETWR-------------------EVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDP- 157 (330)
T ss_dssp TTT---CCC-GGGCBHHHHH-------------------HHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECT-
T ss_pred ccc---hhH-HhhccHHHHH-------------------HHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeC-
Confidence 000 000 0001111111 1245678899999999999999999999999999999984
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
++|+++|+||.+|++++....
T Consensus 158 ---~~~~~~Givt~~dl~~~~~~~ 178 (330)
T 2v8q_E 158 ---ESGNTLYILTHKRILKFLKLF 178 (330)
T ss_dssp ---TTCCEEEEECHHHHHHHHHHH
T ss_pred ---CCCcEEEEEcHHHHHHHHHHH
Confidence 136799999999999887543
No 60
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.41 E-value=6.5e-13 Score=138.78 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=101.7
Q ss_pred cccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecC--CCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 254 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDE--GVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 254 ~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~--~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+++++|.+ +++++++++++.+++++|.+++++++||+|+ + ++++|+|+.+||.. . .+
T Consensus 114 ~~~~~m~~--d~v~l~~~~tv~ea~~~m~~~~~s~~pVvd~g~~-----------~~lvGiVt~rDl~~---~----~~- 172 (511)
T 3usb_A 114 RSESGVIS--DPFFLTPEHQVYDAEHLMGKYRISGVPVVNNLDE-----------RKLVGIITNRDMRF---I----QD- 172 (511)
T ss_dssp TSSSCSSS--SCCCBCTTSBHHHHHHHHHHHCCSEEEEESCTTT-----------CBEEEEEEHHHHTT---C----CC-
T ss_pred cccccccc--CCEEECCCCCHHHHHHHHHHcCCcEEEEEecCCC-----------CEEEEEEEehHhhh---h----cc-
Confidence 45677888 8899999999999999999999999999997 5 89999999999942 0 00
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccC-CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~-~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
...+++++|++ +++++++++++.+++++|.+.+.+.+||||+
T Consensus 173 -----------------------------------~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe-- 215 (511)
T 3usb_A 173 -----------------------------------YSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDN-- 215 (511)
T ss_dssp -----------------------------------SSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECT--
T ss_pred -----------------------------------CCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeC--
Confidence 11345667877 8899999999999999999999999999998
Q ss_pred cCCCCcEEEEEeHHHHHHHHHh
Q 013262 411 AAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+|+++|+||++|+++....
T Consensus 216 ---~g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 216 ---NGVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp ---TSBEEEEEEHHHHHHHHHC
T ss_pred ---CCCEeeeccHHHHHHhhhc
Confidence 5789999999999998764
No 61
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.40 E-value=3.8e-13 Score=132.57 Aligned_cols=132 Identities=14% Similarity=0.136 Sum_probs=101.9
Q ss_pred cccccc--cc-CCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 253 LTVGEL--ID-AKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 253 l~v~di--M~-~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
.+++++ |. + ++.++++++++.++.+.|.+++++.+||+|++ ++++|+|+++|++..+....+..
T Consensus 190 ~~v~~~~v~~~~--~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~-----------~~l~Giit~~dl~~~~~~~~~~~ 256 (330)
T 2v8q_E 190 KSLEELQIGTYA--NIAMVRTTTPVYVALGIFVQHRVSALPVVDEK-----------GRVVDIYSKFDVINLAAEKTYNN 256 (330)
T ss_dssp SBHHHHTCSBCS--SCCCEETTCBHHHHHHHHHHHCCSEEEEECTT-----------SBEEEEEEGGGTGGGGGSSCCCC
T ss_pred CCHHHhcccCcC--CceEECCCCCHHHHHHHHHHcCCCeEEEECCC-----------CcEEEEEEHHHHHHHHhcccccc
Confidence 345555 54 5 78899999999999999999999999999976 89999999999976443211000
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCc
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKY 409 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~ 409 (447)
...++.+++. .+..|.++++++++++++.+++++|.+.+.+++||+|+
T Consensus 257 -----------~~~~v~~~~~--------------------~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~- 304 (330)
T 2v8q_E 257 -----------LDVSVTKALQ--------------------HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDE- 304 (330)
T ss_dssp -----------CSSBHHHHGG--------------------GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECT-
T ss_pred -----------ccCcHHHHHh--------------------ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcC-
Confidence 0012222221 12234688999999999999999999999999999997
Q ss_pred ccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 410 EAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 410 ~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|+++++.+.
T Consensus 305 ----~g~l~Giit~~Dil~~~~~~ 324 (330)
T 2v8q_E 305 ----HDVVKGIVSLSDILQALVLT 324 (330)
T ss_dssp ----TSBEEEEEEHHHHHHHHHSS
T ss_pred ----CCcEEEEEeHHHHHHHHHhh
Confidence 57899999999999987654
No 62
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.40 E-value=1.5e-12 Score=127.75 Aligned_cols=130 Identities=6% Similarity=0.037 Sum_probs=100.3
Q ss_pred cccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCc--eEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 254 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVAT--ELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 254 ~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~--~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
++.++|.+ +++++++++++.++++.|.+++++.+||+|++. .++ +++|+|+.+|+++.+....-..
T Consensus 115 ~~~~~~~~--~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~--------~~~~~~l~Givt~~di~~~l~~~~~~~-- 182 (323)
T 3t4n_C 115 RALGVDQL--DTASIHPSRPLFEACLKMLESRSGRIPLIDQDE--------ETHREIVVSVLTQYRILKFVALNCRET-- 182 (323)
T ss_dssp HHTTC------CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECT--------TTCCEEEEEEEEHHHHHHHHHHHCGGG--
T ss_pred HHhCCCCC--CceEeCCCCcHHHHHHHHHhCCeeEEEEEecCC--------CCCccceEEEecHHHHHHHHHhcCCch--
Confidence 35566777 889999999999999999999999999999861 111 3999999999988664311000
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCcccc---ccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPL---TNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~i---m~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
. .....++++ |.++++++.+++++.+|.++|.+.+.+++||+|+
T Consensus 183 ---------------~------------------~~~~~v~~~~~~m~~~~~~v~~~~~~~~~~~~m~~~~~~~~pVvd~ 229 (323)
T 3t4n_C 183 ---------------H------------------FLKIPIGDLNIITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE 229 (323)
T ss_dssp ---------------G------------------GCCSBGGGTTCSBCTTCCCBCTTSBHHHHHHHHHHHTCSEEEEECT
T ss_pred ---------------h------------------hhhCcHHHcCCCCCCCcEEECCCCcHHHHHHHHHHcCCCEEEEECC
Confidence 0 011235556 8889999999999999999999999999999987
Q ss_pred cccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 409 YEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 409 ~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+|+++|+||++|++++....
T Consensus 230 -----~~~~~Giit~~dl~~~~~~~ 249 (323)
T 3t4n_C 230 -----NGYLINVYEAYDVLGLIKGG 249 (323)
T ss_dssp -----TCBEEEEEETTHHHHHHHTT
T ss_pred -----CCeEEEEEeHHHHHHHHhhc
Confidence 57899999999999876643
No 63
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.40 E-value=1.7e-12 Score=128.02 Aligned_cols=148 Identities=19% Similarity=0.218 Sum_probs=107.0
Q ss_pred cccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 250 MRTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 250 l~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
++..+|+|+|.++.+++++++++++.++++.|.+++++.+||++++ .++++|+|+.+|++..+...+-..
T Consensus 19 l~~~~v~dim~~~~~vv~v~~~~tv~~a~~~~~~~~~~~~pV~d~~----------~~~~vGiv~~~Dl~~~~~~~~~~~ 88 (334)
T 2qrd_G 19 IRSRTSYDVLPTSFRLIVFDVTLFVKTSLSLLTLNNIVSAPLWDSE----------ANKFAGLLTMADFVNVIKYYYQSS 88 (334)
T ss_dssp HHHSBGGGGSCSEEEEEEEETTSBHHHHHHHHHHHTCSCEEEEETT----------TTEEEEEECHHHHHHHHHHHHHHC
T ss_pred HhcCchhhhCCCCCCEEEEcCCCCHHHHHHHHHHcCCeEEEEEeCC----------CCeEEEEEEHHHHHHHHHHHhhcc
Confidence 4568999999875468899999999999999999999999999874 279999999999988664321000
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCC--ceecCCCCHHHHHHHHHHcCCCEEEEEe
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTP--YTVIESMSVAKAMVLFRQVGLRHLLVVP 407 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p--~tV~~~~sL~~a~~lf~~~gl~~LpVVd 407 (447)
.. .............++.+ -++++|.+++ +++.+++++.++++.|.+.+.+++||+|
T Consensus 89 ~~--~~~~~~~~~~~~~~i~~-------------------~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd 147 (334)
T 2qrd_G 89 SF--PEAIAEIDKFRLLGLRE-------------------VERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLID 147 (334)
T ss_dssp SC--GGGGGGGGSCBHHHHHH-------------------HHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEE
T ss_pred CC--ccHHHHHhhhchhhHHH-------------------HHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEe
Confidence 00 00000000111111110 0123566667 8999999999999999999999999998
Q ss_pred CcccCCCCc----EEEEEeHHHHHHHHHh
Q 013262 408 KYEAAGVSP----VVGILTRQDLRAFNIL 432 (447)
Q Consensus 408 ~~~~~g~~~----lvGIITr~DLl~~~~~ 432 (447)
+ +| ++ ++|+||.+|++++...
T Consensus 148 ~---~~-~~~~~~~~Givt~~dl~~~~~~ 172 (334)
T 2qrd_G 148 V---DG-ETGSEMIVSVLTQYRILKFISM 172 (334)
T ss_dssp E---ET-TTTEEEEEEEEEHHHHHHHHHH
T ss_pred C---CC-CcCccceEEEeeHHHHHHHHHh
Confidence 7 22 34 9999999999987764
No 64
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.37 E-value=2.5e-12 Score=134.19 Aligned_cols=118 Identities=14% Similarity=0.211 Sum_probs=103.4
Q ss_pred cccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEec--CCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 254 TVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLD--EGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 254 ~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd--~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+++++|.+ +++++++++++.++++.|.+++++.+||+| ++ ++++|+|+.+||+.. . +
T Consensus 91 ~~~~im~~--~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~~-----------~~lvGivt~~Dl~~~--~-----~- 149 (491)
T 1zfj_A 91 RSENGVII--DPFFLTPEHKVSEAEELMQRYRISGVPIVETLAN-----------RKLVGIITNRDMRFI--S-----D- 149 (491)
T ss_dssp HHTTTTSS--SCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTTT-----------CBEEEEEEHHHHHHC--S-----C-
T ss_pred hHHhcCcC--CCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCCC-----------CEEEEEEEHHHHhhh--c-----c-
Confidence 35789998 899999999999999999999999999999 55 899999999999641 0 0
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccC-CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~-~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
...+++++|++ +++++++++++.+++++|.+.+.+.+||||+
T Consensus 150 -----------------------------------~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~-- 192 (491)
T 1zfj_A 150 -----------------------------------YNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDN-- 192 (491)
T ss_dssp -----------------------------------SSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECT--
T ss_pred -----------------------------------CCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC--
Confidence 12357788988 8999999999999999999999999999997
Q ss_pred cCCCCcEEEEEeHHHHHHHHHh
Q 013262 411 AAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+++++|+||++|+++...+
T Consensus 193 ---~g~lvGivt~~Dil~~~~~ 211 (491)
T 1zfj_A 193 ---SGRLSGLITIKDIEKVIEF 211 (491)
T ss_dssp ---TSBEEEEEEHHHHHHHHHC
T ss_pred ---CCcEEEEEEHHHHHHHHhc
Confidence 5789999999999998764
No 65
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.35 E-value=2.9e-13 Score=140.96 Aligned_cols=118 Identities=17% Similarity=0.266 Sum_probs=88.6
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+++++|.+ +++++++++++.+++++|.+++++++||+|++ ++++|+|+.+||.. ..+
T Consensus 89 k~~~~~m~~--d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~~-----------~~lvGiVt~rDL~~-------~~~-- 146 (496)
T 4fxs_A 89 KIFEAGVVT--HPVTVRPEQTIADVMELTHYHGFAGFPVVTEN-----------NELVGIITGRDVRF-------VTD-- 146 (496)
T ss_dssp HHCCC--CB--CCCCBCSSSBHHHHHHHHTSSCCCEEEEECSS-----------SBEEEEEEHHHHTT-------CCC--
T ss_pred ccccccccc--CceEECCCCCHHHHHHHHHHcCCcEEEEEccC-----------CEEEEEEEHHHHhh-------ccc--
Confidence 356788998 89999999999999999999999999999986 89999999999841 000
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCcccccc-C-CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN-T-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~-~-~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
...+++++|+ + +++++++++++.+++++|.+++++.+||||+
T Consensus 147 ----------------------------------~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-- 190 (496)
T 4fxs_A 147 ----------------------------------LTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVND-- 190 (496)
T ss_dssp ----------------------------------TTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECT--
T ss_pred ----------------------------------CCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcC--
Confidence 1235777887 4 5899999999999999999999999999998
Q ss_pred cCCCCcEEEEEeHHHHHHHHH
Q 013262 411 AAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~ 431 (447)
+|+++|+||++|+++...
T Consensus 191 ---~G~l~GiIT~~DIl~~~~ 208 (496)
T 4fxs_A 191 ---EFQLKGMITAKDFHKAES 208 (496)
T ss_dssp ---TSBCCEEECCC-----CC
T ss_pred ---CCCEEEeehHhHHHHhhc
Confidence 678999999999998643
No 66
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.29 E-value=3.1e-13 Score=140.53 Aligned_cols=117 Identities=17% Similarity=0.225 Sum_probs=3.5
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcc
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKR 332 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~ 332 (447)
.+++++|.+ +++++++++++.+++++|.+++++++||+| + ++++|+|+.+||.... +
T Consensus 88 k~~~~~m~~--~~v~v~~~~tv~ea~~~m~~~~~s~~pVvd-~-----------g~lvGIVt~rDl~~~~-------~-- 144 (490)
T 4avf_A 88 KKHETAIVR--DPVTVTPSTKIIELLQMAREYGFSGFPVVE-Q-----------GELVGIVTGRDLRVKP-------N-- 144 (490)
T ss_dssp HHCCC---------------------------------------------------------------------------
T ss_pred cccccCccc--CceEeCCCCcHHHHHHHHHHhCCCEEEEEE-C-----------CEEEEEEEhHHhhhcc-------c--
Confidence 457889998 889999999999999999999999999999 5 8999999999984210 0
Q ss_pred cchhhhhhhcchHHHHhhhcccccccccchhhhhhccCcccccc-C-CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcc
Q 013262 333 RTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTN-T-TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYE 410 (447)
Q Consensus 333 ~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~-~-~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~ 410 (447)
...+++++|. + +++++++++++.+++++|.+++++.+||||+
T Consensus 145 ----------------------------------~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe-- 188 (490)
T 4avf_A 145 ----------------------------------AGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDE-- 188 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----------------------------------cCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcC--
Confidence 1134677887 4 6899999999999999999999999999997
Q ss_pred cCCCCcEEEEEeHHHHHHHHH
Q 013262 411 AAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 411 ~~g~~~lvGIITr~DLl~~~~ 431 (447)
+++++|+||++|+++...
T Consensus 189 ---~g~lvGiIT~~Dil~~~~ 206 (490)
T 4avf_A 189 ---NFYLRGLVTFRDIEKAKT 206 (490)
T ss_dssp ---------------------
T ss_pred ---CCcEEEEEehHHhhhhcc
Confidence 578999999999998754
No 67
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.29 E-value=2.4e-13 Score=141.99 Aligned_cols=177 Identities=17% Similarity=0.178 Sum_probs=33.2
Q ss_pred hhHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhcCCchHHHHHHhhCCCCCCCCC-C-c----ccccccccccccCCC
Q 013262 190 MTVSLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDAHP-E-P----WMRTLTVGELIDAKP 263 (447)
Q Consensus 190 ~p~s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l~~sIYd~~l~~kg~p~l~~~~-~-~----~l~~l~v~diM~~~~ 263 (447)
.|. -+-+..|+|+++.+.+|++.+.+.. .....+.....+..|+.++.... . . ...-.+++|+|.+
T Consensus 32 ~p~-~v~~~~eLt~~~~l~iP~is~~m~~-----v~~~~lA~al~~~GglG~i~~~~~~e~~~~~v~~v~~~~~iM~~-- 103 (494)
T 1vrd_A 32 LPK-DVKIDTRLTRQIRINIPLVSAAMDT-----VTEAALAKALAREGGIGIIHKNLTPDEQARQVSIVKKTENGIIY-- 103 (494)
T ss_dssp CGG-GSCCCEESSSSCEESSSEEECCCTT-----TCSHHHHHHHHTTTCEEEECSSSCHHHHHHHHHHHHTC--------
T ss_pred CCC-ceEEEehhhCCCccCceeEecchHH-----HhHHHHHHHHHHcCCceEEecCCChHHHHHHHHhhhhHhhcCcc--
Confidence 344 4556778999999888875443211 11223333333433443222111 0 0 1112457899998
Q ss_pred CeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcccchhhhhhhcc
Q 013262 264 PVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKF 343 (447)
Q Consensus 264 ~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~~~~~~~~~~ 343 (447)
+++++++++++.++++.|.+++++.+||+|++ ++++|+|+.+|+... . +
T Consensus 104 ~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~-----------~~lvGivt~~Dl~~~--~-----~------------- 152 (494)
T 1vrd_A 104 DPITVTPDMTVKEAIDLMAEYKIGGLPVVDEE-----------GRLVGLLTNRDVRFE--K-----N------------- 152 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCeEECCCCCHHHHHHHHHHcCceEEEEEcCC-----------CEEEEEEEHHHHHhh--c-----C-------------
Confidence 89999999999999999999999999999986 899999999999641 0 0
Q ss_pred hHHHHhhhcccccccccchhhhhhccCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEE
Q 013262 344 SWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGIL 421 (447)
Q Consensus 344 ~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGII 421 (447)
...+++++|++ +++++++++++.+++++|.+.+++.+||||+ +++++|+|
T Consensus 153 -----------------------~~~~v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiI 204 (494)
T 1vrd_A 153 -----------------------LSKKIKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSK-----DNKLVGLI 204 (494)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------CCCcHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcC-----CCeEEEEE
Confidence 01246778887 8999999999999999999999999999997 57899999
Q ss_pred eHHHHHHHHHhh
Q 013262 422 TRQDLRAFNILT 433 (447)
Q Consensus 422 Tr~DLl~~~~~~ 433 (447)
|++|+++.....
T Consensus 205 t~~Dll~~~~~~ 216 (494)
T 1vrd_A 205 TIKDIMSVIEHP 216 (494)
T ss_dssp ----CHHHHTCT
T ss_pred EHHHHHhhhccc
Confidence 999999987644
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.26 E-value=6e-13 Score=136.21 Aligned_cols=117 Identities=16% Similarity=0.229 Sum_probs=0.9
Q ss_pred cccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcccch
Q 013262 256 GELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTE 335 (447)
Q Consensus 256 ~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~~ 335 (447)
+..|.. +++++.|+.++.++.+++.+++++++||+++. ..+++|+|+||.+|+.. . +
T Consensus 141 e~g~i~--dPvtl~P~~Tv~da~~l~~~~~isgvpVvd~g--------~~~~kLvGIvT~RD~rf-------~-d----- 197 (556)
T 4af0_A 141 ENGFIT--DPLCLGPDATVGDVLEIKAKFGFCGVPITETG--------EPDSKLLGIVTGRDVQF-------Q-D----- 197 (556)
T ss_dssp CC------------------------------------------------------------------------------
T ss_pred ccCccC--CCeEcCCCCCHHHHHHHHHHhCCCcccccccc--------CcCCEEEEEEecccccc-------c-c-----
Confidence 345777 78899999999999999999999999999874 12389999999999842 0 0
Q ss_pred hhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCC
Q 013262 336 EWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVS 415 (447)
Q Consensus 336 ~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~ 415 (447)
....++++|.+++++++++.++++|.++|.+++++.+||||+ ++
T Consensus 198 -------------------------------~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~-----~g 241 (556)
T 4af0_A 198 -------------------------------AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDS-----NG 241 (556)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEcc-----CC
Confidence 113477889899999999999999999999999999999998 67
Q ss_pred cEEEEEeHHHHHHHHH
Q 013262 416 PVVGILTRQDLRAFNI 431 (447)
Q Consensus 416 ~lvGIITr~DLl~~~~ 431 (447)
+++|+||++|+.+...
T Consensus 242 ~LvGlIT~kDi~k~~~ 257 (556)
T 4af0_A 242 HLVSLVARSDLLKNQN 257 (556)
T ss_dssp ----------------
T ss_pred cEEEEEEechhhhhhh
Confidence 8999999999988543
No 69
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.24 E-value=5.3e-13 Score=139.42 Aligned_cols=126 Identities=13% Similarity=0.138 Sum_probs=4.8
Q ss_pred cccccccc-ccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhh
Q 013262 251 RTLTVGEL-IDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQ 329 (447)
Q Consensus 251 ~~l~v~di-M~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~ 329 (447)
..++..++ |.+ +++++++++++.+++++|.+++++++||+|++ ...++++|+|+.+||+.. ...
T Consensus 94 ~~V~~~e~gM~~--~~~~v~~~~tv~eal~~m~~~~~s~~pVvd~~--------~~~g~lvGiVt~~Dl~~~--~~~--- 158 (503)
T 1me8_A 94 HAVKNFKAGFVV--SDSNVKPDQTFADVLAISQRTTHNTVAVTDDG--------TPHGVLLGLVTQRDYPID--LTQ--- 158 (503)
T ss_dssp HHHHTTTC------------------------------------------------------------------------
T ss_pred hhhhhcccCccc--CCeEECCCCcHHHHHHHHHHcCceEEEEEECC--------CcCCeEEEEEEHHHHHhh--hcc---
Confidence 44555666 998 89999999999999999999999999999863 012689999999999642 000
Q ss_pred hcccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCC--CceecCCCCHHHHHHHHHHcCCCEEEEEe
Q 013262 330 EKRRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTT--PYTVIESMSVAKAMVLFRQVGLRHLLVVP 407 (447)
Q Consensus 330 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~--p~tV~~~~sL~~a~~lf~~~gl~~LpVVd 407 (447)
...+++++|++. ++++++++++.+++++|.+.+.+.+||||
T Consensus 159 -------------------------------------~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVD 201 (503)
T 1me8_A 159 -------------------------------------TETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIID 201 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------------------------------------ccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEc
Confidence 113467788877 99999999999999999999999999999
Q ss_pred CcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 408 KYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 408 ~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+ +++++|+||++|+++.+...
T Consensus 202 e-----~g~lvGiIT~~Dil~~~~~~ 222 (503)
T 1me8_A 202 D-----DQHLRYIVFRKDYDRSQVCH 222 (503)
T ss_dssp -------------------------C
T ss_pred C-----CCeEEEEEEecHHHHhhhcc
Confidence 7 57899999999999987643
No 70
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.18 E-value=5.5e-13 Score=139.89 Aligned_cols=178 Identities=15% Similarity=0.199 Sum_probs=96.6
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhcCCchHHHHHHhhCCCCCCC--CCCccc----ccccccccccCCCCee
Q 013262 193 SLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDA--HPEPWM----RTLTVGELIDAKPPVI 266 (447)
Q Consensus 193 s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l~~sIYd~~l~~kg~p~l~~--~~~~~l----~~l~v~diM~~~~~vv 266 (447)
+.+.|..|+|+++.+.+|+|.+.+.... ...+.+......|..++.. .++... .-.+++++|.+ +++
T Consensus 47 ~~v~l~~eLt~~~~~~iP~vsa~md~~t-----~~~la~~ia~~gg~gii~~~~t~e~~~~~v~~v~~~~~im~~--~~~ 119 (514)
T 1jcn_A 47 DEVDLTSALTRKITLKTPLISSPMDTVT-----EADMAIAMALMGGIGFIHHNCTPEFQANEVRKVKNFEQGFIT--DPV 119 (514)
T ss_dssp GGCBCCEESSSSCEESSCEEECCCTTTC-----SHHHHHHHHHTTCEEEECCSSCHHHHHHHHHHHHTCCTTSCS--SCC
T ss_pred ceeEEEeeccCCeeEeceEEEEehhhhh-----hhhHHHHHHhcCCeeEEecCCCHHHHHHHHHhhhhhhhcccc--CCE
Confidence 4577788999999988988765221100 1122233333333333221 011100 12467899998 888
Q ss_pred EecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcccchhhhhhhcchHH
Q 013262 267 TLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWV 346 (447)
Q Consensus 267 ~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 346 (447)
++++++++.+++++|.+++++++||+|++ ..+++++|+|+++|+......
T Consensus 120 ~v~~~~tv~ea~~~m~~~~~~~~pVvd~~--------~~~~~lvGiVt~~Dl~~~~~~---------------------- 169 (514)
T 1jcn_A 120 VLSPSHTVGDVLEAKMRHGFSGIPITETG--------TMGSKLVGIVTSRDIDFLAEK---------------------- 169 (514)
T ss_dssp CCCC-----------------CEESCC----------------CCEECTTTTC---------------------------
T ss_pred EECCCCCHHHHHHHHHhcCCCEEEEEeCC--------CcCCEEEEEEEHHHHHhhhhc----------------------
Confidence 99999999999999999999999999872 002799999999998542100
Q ss_pred HHhhhcccccccccchhhhhhccCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHH
Q 013262 347 ELAEREGKIEEVAVTSEEMEMYIDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQ 424 (447)
Q Consensus 347 d~~~~~~~~~~~~l~~~~~~~~idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~ 424 (447)
....+++++|++ +++++++++++.+++++|.+.+.+.+||||+ +|+++|+||++
T Consensus 170 -------------------~~~~~v~~vm~~~~~~~tv~~~~~l~ea~~~m~~~~~~~lpVVd~-----~g~lvGiIt~~ 225 (514)
T 1jcn_A 170 -------------------DHTTLLSEVMTPRIELVVAPAGVTLKEANEILQRSKKGKLPIVND-----CDELVAIIART 225 (514)
T ss_dssp ------------------------------CCBCCCCEETTCCSTTTTTHHHHHTCSCCCEESS-----SSCCC----CC
T ss_pred -------------------cCCCCHHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCCcccEECC-----CCeEEEEEEHH
Confidence 011346778888 8999999999999999999999999999997 57899999999
Q ss_pred HHHHHHH
Q 013262 425 DLRAFNI 431 (447)
Q Consensus 425 DLl~~~~ 431 (447)
|+++++.
T Consensus 226 Dll~~~~ 232 (514)
T 1jcn_A 226 DLKKNRD 232 (514)
T ss_dssp CCSSCCC
T ss_pred HHHHHhh
Confidence 9987654
No 71
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.08 E-value=1.1e-11 Score=128.97 Aligned_cols=170 Identities=20% Similarity=0.209 Sum_probs=25.1
Q ss_pred HHHHHHHHhhcCCchHHHHHHHHHHHHHHHhhcCCchHHHHHHhhCCCCCCCC-C----Ccccc-cccccccccCCCCee
Q 013262 193 SLCVIFLELTNNLLLLPITMIVLLIAKTVGDSFNPSIYEIILELKGLPFLDAH-P----EPWMR-TLTVGELIDAKPPVI 266 (447)
Q Consensus 193 s~~vi~~E~t~~~~~~~p~~ia~~va~~v~~~l~~sIYd~~l~~kg~p~l~~~-~----~~~l~-~l~v~diM~~~~~vv 266 (447)
..+.+.+|+|+++.+.+|+|.+.+.+.. ...+....-+..|...+... . ...+. -..++++|.. +++
T Consensus 32 ~~v~l~t~lt~~l~l~~PIi~a~m~~vt-----~~ela~ava~~GglG~i~~~~~~e~~~~~I~~v~~~~~~m~~--~~~ 104 (486)
T 2cu0_A 32 KDVDVSTRITPNVKLNIPILSAAMDTVT-----EWEMAVAMAREGGLGVIHRNMGIEEQVEQVKRVKRAERLIVE--DVI 104 (486)
T ss_dssp TTCBCCEEEETTEEESSSEEECCCTTTC-----SHHHHHHHHHTTCEEEECSSSCHHHHHHHHHHHHTCC----------
T ss_pred ceEEEEeeecCCcccccceEEccceeec-----HHHHHHHHHhcCCceeecCCCCHHHHHHHHHhhcchhhcccc--Cce
Confidence 3556678899999998998765432110 01111111111122112110 0 00111 1345778988 899
Q ss_pred EecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhcccchhhhhhhcchHH
Q 013262 267 TLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEKRRTEEWEVREKFSWV 346 (447)
Q Consensus 267 ~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 346 (447)
++++++++.++++.|.+++++.+||+|+ ++++|+|+.+||.. .
T Consensus 105 ~v~~~~tv~ea~~~~~~~~~~~~pVvd~------------~~lvGivt~~Dl~~---~---------------------- 147 (486)
T 2cu0_A 105 TIAPDETVDFALFLMEKHGIDGLPVVED------------EKVVGIITKKDIAA---R---------------------- 147 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EECCCCCHHHHHHHHHHcCCcEEEEEEC------------CEEEEEEEHHHhcc---C----------------------
Confidence 9999999999999999999999999986 68999999999853 1
Q ss_pred HHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHH
Q 013262 347 ELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDL 426 (447)
Q Consensus 347 d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DL 426 (447)
...+++++|+++++++++++++.+++++|.+.+.+.+||||+ +++++|+||++|+
T Consensus 148 --------------------~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde-----~g~lvGiiT~~Di 202 (486)
T 2cu0_A 148 --------------------EGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDE-----RGKLVGLITMSDL 202 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------CCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEec-----CCeEEEEEEHHHH
Confidence 012466778888999999999999999999999999999997 5679999999999
Q ss_pred HHHHH
Q 013262 427 RAFNI 431 (447)
Q Consensus 427 l~~~~ 431 (447)
++...
T Consensus 203 l~~~~ 207 (486)
T 2cu0_A 203 VARKK 207 (486)
T ss_dssp ----C
T ss_pred HHhhh
Confidence 98754
No 72
>1ots_A Voltage-gated CLC-type chloride channel ERIC; CLC chloride channel, FAB complex, membrane protein; 2.51A {Escherichia coli} SCOP: f.20.1.1 PDB: 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2htl_A 3ejy_A 2ht2_A 2fed_A 2fec_A 1otu_A 3ejz_A 2ht4_A 2htk_A 2ht3_A 1ott_A 2h2s_A 3det_A 2ez0_A 3nmo_A ...
Probab=98.86 E-value=1.3e-08 Score=105.02 Aligned_cols=121 Identities=14% Similarity=0.146 Sum_probs=95.6
Q ss_pred ChHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 013262 100 TNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLG 179 (447)
Q Consensus 100 ~~~~~i~~l~~~~~~~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~~~a~~G 179 (447)
+|-..++..++... .... +-.+..|++.+.+|+|+|.+.|...|+..+||++|..+++.++.....+...+..+|
T Consensus 107 sGip~v~~~l~~~~--~~~~---~r~~~~k~~~~~lti~sG~s~GrEGP~vqiGa~ig~~l~~~~~l~~~~~~r~li~~G 181 (465)
T 1ots_A 107 SGIPEIEGALEDQR--PVRW---WRVLPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLKGDEARHTLLATG 181 (465)
T ss_dssp CSHHHHHHHHTTCS--CCCH---HHHHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHHH
T ss_pred CChHHHHHHHhCCC--CCCc---HHHHHHHHHHHHHHHhcCCCcCCcchHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 34445555555421 1221 234568999999999999999999999999999999999988631223456889999
Q ss_pred HHHHHHhhhchhHHHHHHHHHhh-cCCc--h--HHHHHHHHHHHHHHHhhc
Q 013262 180 AASLMAGSMRMTVSLCVIFLELT-NNLL--L--LPITMIVLLIAKTVGDSF 225 (447)
Q Consensus 180 ~aa~~~g~~~~p~s~~vi~~E~t-~~~~--~--~~p~~ia~~va~~v~~~l 225 (447)
|||.+|++.++|++++++.+|.. +.++ . +.|.++++++|+.+++.+
T Consensus 182 aaAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~ 232 (465)
T 1ots_A 182 AAAGLAAAFNAPLAGILFIIEEMRPQFRYTLISIKAVFIGVIMSTIMYRIF 232 (465)
T ss_dssp HHHHHHHHHTCHHHHHHHHTTTTSCSSSCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999965 4444 4 889999999999999865
No 73
>4ene_A CLC-EC1, H(+)/CL(-) exchange transporter CLCA; membrane protein, coupled ION transporter, cell membrane, TR protein; HET: DMU MAL; 2.40A {Escherichia coli k-12} PDB: 1ots_A 2fee_A 2h2p_A 2exw_A 1kpk_A 2exy_A 2fed_A 2fec_A 1otu_A 2htl_A 2ht2_A 3ejy_A 1ott_A 2h2s_A 4fg6_A 2ht4_A 4ftp_A 3ejz_A 2ht3_A 2htk_A ...
Probab=98.76 E-value=3e-08 Score=101.79 Aligned_cols=99 Identities=16% Similarity=0.188 Sum_probs=86.0
Q ss_pred HHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccCCcchH-HHHHHHHHHHHHhhhchhHHHHHHHHHhhc-
Q 013262 126 FILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQG-LYAVLGAASLMAGSMRMTVSLCVIFLELTN- 203 (447)
Q Consensus 126 ~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~-~~a~~G~aa~~~g~~~~p~s~~vi~~E~t~- 203 (447)
+..|++.+.+|.|+|.+.|...|+..+||++|..+++.++.. ..+.. .+..+|+||.+|++.++|++++++.+|...
T Consensus 113 ~~~k~~~~~lti~~G~s~GrEGP~vqiGa~ig~~~~~~~~~~-~~~~r~~ll~aGaaAG~aaaF~aPlaGvlFalE~l~~ 191 (446)
T 4ene_A 113 LPVKFFGGLGTLGGGMVLGREGPTVQIGGNIGRMVLDIFRLK-GDEARHTLLATGAAAGLAAAFNAPLAGILFIIEEMRP 191 (446)
T ss_dssp HHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHHHHTTCC-SHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHhcCCccCCcchHHHHHHHHHHHHHHHcCCC-HHHHHHHHHHHHHHHHHHHHhCCcchHHHHHHHHHHh
Confidence 458999999999999999999999999999999999988731 23333 789999999999999999999999999765
Q ss_pred CC----chHHHHHHHHHHHHHHHhhc
Q 013262 204 NL----LLLPITMIVLLIAKTVGDSF 225 (447)
Q Consensus 204 ~~----~~~~p~~ia~~va~~v~~~l 225 (447)
++ ..+.|.++++++|+.+.+.+
T Consensus 192 ~~~~~~~~~~~~~~as~~a~~v~~~~ 217 (446)
T 4ene_A 192 QFRYTLISIKAVFIGVIMSTIMYRIF 217 (446)
T ss_dssp SSSCCCCCHHHHHHHHHHHHHHHHHT
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 33 24789999999999999877
No 74
>3nd0_A SLL0855 protein; CLC family CL-/H+ antiporter, CLC_EC1 homolog, transport protein; 3.20A {Synechocystis} PDB: 3q17_A
Probab=98.75 E-value=5.2e-08 Score=100.45 Aligned_cols=120 Identities=13% Similarity=0.157 Sum_probs=94.9
Q ss_pred ChHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHHHhhccCCcchHHHHHHH
Q 013262 100 TNDDAVRNIFSSNTPTEFQPSSILIFFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGMAMGSYTNIDQGLYAVLG 179 (447)
Q Consensus 100 ~~~~~i~~l~~~~~~~~~~~~~l~~~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~~~~~~~~~~~~~~a~~G 179 (447)
++-..++..++... .... .-.+..|++.+.+|.|+|.+.|...|+..+||++|..+++.++.. ..+......+|
T Consensus 103 sGIp~v~~~l~g~~--~~~~---~~~~~~k~~~~~ltig~G~S~GrEGP~vqiGa~ig~~l~~~~~~~-~~~~r~ll~aG 176 (466)
T 3nd0_A 103 SGIPQIEGHLEGKL--PLVW---QRVLPIKLVGGFLSLGAGMLAGFEGPTIQMGGSIGQMTGGWFKAT-QENQRILIAVG 176 (466)
T ss_dssp CSHHHHHHHTTSSS--CCCH---HHHHHHHHHHHHHHHHTTCSCCTHHHHHHHHHHHHHHHHHHTTCC-HHHHHHHHHHH
T ss_pred CCHHHHHHHHcCCC--CCch---HHHHHHHHHHHHHHHhcCCCCCCcchHHHHHHHHHHHHHHHcCCC-hhHHHHHHHHH
Confidence 34445666665431 2221 223457999999999999999999999999999999999998742 23456889999
Q ss_pred HHHHHHhhhchhHHHHHHHHHh-hcCC--c--hHHHHHHHHHHHHHHHhhc
Q 013262 180 AASLMAGSMRMTVSLCVIFLEL-TNNL--L--LLPITMIVLLIAKTVGDSF 225 (447)
Q Consensus 180 ~aa~~~g~~~~p~s~~vi~~E~-t~~~--~--~~~p~~ia~~va~~v~~~l 225 (447)
+||.+|++.++|++++++.+|. .+++ . .+.|.++++++|+.+++.+
T Consensus 177 aAAGlaAaF~APlaGvlFalE~l~~~~~~~~~~~~~~~~as~~a~~v~~~~ 227 (466)
T 3nd0_A 177 AGAGLATAFNAPLAGVALIGEEMHPRFRSQTLAYHSLLFGCVMATIILRMI 227 (466)
T ss_dssp HHHHHHHHHTCHHHHHHHHHSSSCCCCSSCCTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCchHHHHHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999995 4445 2 3669999999999999876
No 75
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.69 E-value=4.1e-08 Score=74.21 Aligned_cols=46 Identities=13% Similarity=0.313 Sum_probs=41.9
Q ss_pred eeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHH
Q 013262 265 VITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 322 (447)
Q Consensus 265 vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L 322 (447)
++++++++++.++.++|.+++++++||+|+ ++++|+||.+|+.+.+
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~------------~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------------DEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------------TEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC------------CEEEEEEEHHHHHHHH
Confidence 678999999999999999999999999985 7999999999997543
No 76
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.65 E-value=3.3e-08 Score=91.28 Aligned_cols=102 Identities=13% Similarity=0.129 Sum_probs=54.6
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHhhhhhhhc
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKKKWFLQEK 331 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~~~~~~~~ 331 (447)
+.+++++|.+ +++++++++++.++.+.|.+++++.+||+|++ ++++|+|+++|++..+.......
T Consensus 71 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~lvGiit~~Dil~~~~~~~~~~-- 135 (213)
T 1vr9_A 71 DSSVFNKVSL--PDFFVHEEDNITHALLLFLEHQEPYLPVVDEE-----------MRLKGAVSLHDFLEALIEALAMD-- 135 (213)
T ss_dssp TSBSGGGCBC--TTCCEETTSBHHHHHHHHHHCCCSEEEEECTT-----------CBEEEEEEHHHHHHHHHHSCC----
T ss_pred CCcHHHHccC--CCEEECCCCcHHHHHHHHHHhCCCEEEEEcCC-----------CEEEEEEEHHHHHHHHHHHhcCC--
Confidence 3469999998 88999999999999999999999999999986 89999999999988664321000
Q ss_pred ccchhhhhhhcchHHHHhhhcccccccccchhhhhhccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeC
Q 013262 332 RRTEEWEVREKFSWVELAEREGKIEEVAVTSEEMEMYIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPK 408 (447)
Q Consensus 332 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~l~~~~~~~~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~ 408 (447)
+... .+ .+.+.....++.++.++|.+.+.+.++|++.
T Consensus 136 ---------------~~~~-------------------~l------~~~~~~~~~~l~~~~~~l~~~~~~~l~V~~~ 172 (213)
T 1vr9_A 136 ---------------VPGI-------------------RF------SVLLEDKPGELRKVVDALALSNINILSVITT 172 (213)
T ss_dssp -----------------------------------------------------------------------------
T ss_pred ---------------CCcE-------------------EE------EEEeCCCCccHHHHHHHHHHCCCcEEEEEEE
Confidence 0000 00 0111123345999999999999999999865
No 77
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=98.57 E-value=1.4e-07 Score=101.04 Aligned_cols=101 Identities=10% Similarity=0.006 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHhhccCCccchhhHHHHHHHHHHHHHH--Hhhcc--CCcchHHHHHHHHHHHHHhhhchhHHHHHHHHH
Q 013262 125 FFILYCILGLITFGIAVPSGLFLPIILMGSAYGRLLGM--AMGSY--TNIDQGLYAVLGAASLMAGSMRMTVSLCVIFLE 200 (447)
Q Consensus 125 ~~~~k~~~~~~t~g~g~~gG~f~P~l~iGa~~G~~~g~--~~~~~--~~~~~~~~a~~G~aa~~~g~~~~p~s~~vi~~E 200 (447)
.++.|++.+++|+|+|.+.|...|+..+||++|..++. .++.. ...+...+..+|+||.+|+++++|++++++.+|
T Consensus 104 ~~~~K~~~~~l~igsG~s~GrEGP~vqiGa~ig~~~~~~~~f~~~~~~~~~~r~ll~aGaaAG~aaaF~aPlaGvlFalE 183 (632)
T 3org_A 104 VLFAKALGLICAIGGGLPVGWEGPNVHIACIIAHQFYRLGVFKELCTDRALRLQTLAAACAVGLASSFGAPLGGVLYSIE 183 (632)
T ss_dssp HHHHHHHHHHHHHHTTCSCBSHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCccccchHHHHHHHHHHHHhhhhhhccccCCHHHHHHHHHHHHHHHHHHHhCCccHhHHHHHH
Confidence 34589999999999999999999999999999998887 55421 122345788999999999999999999999999
Q ss_pred hhcC-C--chHHHHHHHHHHHHHHHhhc
Q 013262 201 LTNN-L--LLLPITMIVLLIAKTVGDSF 225 (447)
Q Consensus 201 ~t~~-~--~~~~p~~ia~~va~~v~~~l 225 (447)
.... + ..+.|.++++++|.++.+.+
T Consensus 184 ~~~~~~~~~~~~~~~~as~~a~~v~~~~ 211 (632)
T 3org_A 184 TIASFYLVQAFWKGVLSALSGAIVYELL 211 (632)
T ss_dssp HTCSEEETTHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHh
Confidence 8764 2 35688899999999887765
No 78
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.54 E-value=8e-08 Score=85.11 Aligned_cols=57 Identities=18% Similarity=0.165 Sum_probs=52.8
Q ss_pred ccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHH
Q 013262 368 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAF 429 (447)
Q Consensus 368 ~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~ 429 (447)
.++++++|.++++++++++++.+|+++|.+.+++++||+|+ +|+++|+||.+|+++.
T Consensus 17 ~~~V~diM~~~v~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~g~lvGiit~~Dll~~ 73 (170)
T 4esy_A 17 QVPIRDILTSPVVTVREDDTLDAVAKTMLEHQIGCAPVVDQ-----NGHLVGIITESDFLRG 73 (170)
T ss_dssp TSBGGGGCCSCCCCEETTSBHHHHHHHHHHTTCSEEEEECT-----TSCEEEEEEGGGGGGG
T ss_pred CCCHHHhcCCCCcEECCcCcHHHHHHHHHHcCCeEEEEEcC-----CccEEEEEEHHHHHHH
Confidence 36789999999999999999999999999999999999997 5789999999999864
No 79
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.50 E-value=2.5e-07 Score=69.77 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=43.2
Q ss_pred CceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 379 PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 379 p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+++++|++++.+|.++|.+.+++++||+|+ ++++||||.+|+++....
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~------~~lvGIvT~~Di~~~~~~ 49 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------TEEEEEEEHHHHHHHTTT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC------CEEEEEEEHHHHHHHHHh
Confidence 578999999999999999999999999984 579999999999876543
No 80
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=98.42 E-value=5.1e-07 Score=85.48 Aligned_cols=63 Identities=11% Similarity=0.219 Sum_probs=55.7
Q ss_pred ccCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 368 YIDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 368 ~idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
.+.++++|.+++++|.+++++.+|.++|.+.+++.+||||+ +++++++|+||++||+++....
T Consensus 12 ~~~v~diMt~~vvtv~~~~tv~~~~~lm~~~~~~~~PVVd~---~~~~~LvGiIt~~dl~~~l~~~ 74 (250)
T 2d4z_A 12 NIQVGDIMVRDVTSIASTSTYGDLLHVLRQTKLKFFPFVDT---PDTNTLLGSIDRTEVEGLLQRR 74 (250)
T ss_dssp SCBTTSSSBSSCCCEETTCBHHHHHHHHHHCCCSEEEEESC---TTTCBEEEEEEHHHHHHHHHHH
T ss_pred CCChHHhcCCCCeEECCCCCHHHHHHHHHhcCCCEEEEEec---CCCCeEEEEEEHHHHHHHHHHh
Confidence 35688999999999999999999999999999999999986 3346899999999999876644
No 81
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.41 E-value=6.9e-07 Score=66.59 Aligned_cols=48 Identities=13% Similarity=0.284 Sum_probs=43.1
Q ss_pred CeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHH
Q 013262 264 PVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALK 323 (447)
Q Consensus 264 ~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~ 323 (447)
+++++++++++.++++.|.+++++.+||+|+ ++++|+|+.+|+.+.+.
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~------------~~l~Givt~~dl~~~~~ 48 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG------------DEILGVVTERDILDKVV 48 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET------------TEEEEEEEHHHHHHHTT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC------------CEEEEEEEHHHHHHHHH
Confidence 3578999999999999999999999999986 69999999999987553
No 82
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.35 E-value=6.7e-07 Score=83.97 Aligned_cols=60 Identities=15% Similarity=0.226 Sum_probs=55.0
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
..++++|.+++.++++++++.+|+++|.+.+++++||+|+ +|+++|+||..|+++++...
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~m~~~~~~~lpVvd~-----~~~l~Giit~~di~~~~~~~ 66 (245)
T 3l2b_A 7 LKVEDLEMDKIAPLAPEVSLKMAWNIMRDKNLKSIPVADG-----NNHLLGMLSTSNITATYMDI 66 (245)
T ss_dssp CBGGGSCCBCCCCBCTTCBHHHHHHHHHHTTCSEEEEECT-----TCBEEEEEEHHHHHHHHHCC
T ss_pred CcHHHhcCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCEEEEEEEHHHHHHHHHHh
Confidence 4688999999999999999999999999999999999997 57899999999999988643
No 83
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.34 E-value=1e-06 Score=75.85 Aligned_cols=60 Identities=18% Similarity=0.247 Sum_probs=53.8
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCC-CcEEEEEeHHHHHHHHHhh
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~-~~lvGIITr~DLl~~~~~~ 433 (447)
..++++|.+ +++++++++++.+|.++|.+.+.+++||+|+ + ++++|+||++|+++...+.
T Consensus 23 ~~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~~~ 85 (148)
T 3lv9_A 23 KKIREIMVPRTDMVCIYESDSEEKILAILKEEGVTRYPVCRK-----NKDDILGFVHIRDLYNQKINE 85 (148)
T ss_dssp CBGGGTSEETTTCCCEETTCCHHHHHHHHHHSCCSEEEEESS-----STTSEEEEEEHHHHHHHHHHH
T ss_pred CCHHHccccHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHhcC
Confidence 457889988 8999999999999999999999999999986 4 6899999999999886544
No 84
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.33 E-value=7.1e-07 Score=79.19 Aligned_cols=60 Identities=13% Similarity=0.102 Sum_probs=53.1
Q ss_pred cCcccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCC-CcEEEEEeHHHHHHHHHhh
Q 013262 369 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 369 idl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~-~~lvGIITr~DLl~~~~~~ 433 (447)
..++++|. ++++++++++++.+|+++|.+.+.+++||+|+ + ++++|+||.+|++++..+.
T Consensus 42 ~~v~diM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~-----~~~~lvGivt~~dl~~~~~~~ 104 (172)
T 3lhh_A 42 RTISSLMVPRSDIVFLDLNLPLDANLRTVMQSPHSRFPVCRN-----NVDDMVGIISAKQLLSESIAG 104 (172)
T ss_dssp -CTTTTSEEGGGCCCEETTSCHHHHHHHHHTCCCSEEEEESS-----STTSEEEEEEHHHHHHHHHTT
T ss_pred CCHHHhCccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEeC-----CCCeEEEEEEHHHHHHHHhhc
Confidence 46788998 67889999999999999999999999999986 4 6899999999999987643
No 85
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.32 E-value=1.1e-06 Score=65.46 Aligned_cols=48 Identities=13% Similarity=0.205 Sum_probs=43.6
Q ss_pred CceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 379 PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 379 p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
++++++++++.+|.++|.+.+.+.+||+|+ ++++|+||++|++++...
T Consensus 2 ~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~------~~l~Givt~~dl~~~~~~ 49 (70)
T 3fio_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG------DEILGVVTERDILDKVVA 49 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET------TEEEEEEEHHHHHHHTTT
T ss_pred CeEECCCCcHHHHHHHHHHcCCCEEEEEEC------CEEEEEEEHHHHHHHHHH
Confidence 568999999999999999999999999984 579999999999998654
No 86
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=98.29 E-value=1.2e-06 Score=75.51 Aligned_cols=59 Identities=17% Similarity=0.173 Sum_probs=53.7
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|.+ +++++++++++.+|.++|.+.+.+++||+|+ +++++|+||++|+++...+
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 88 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLRDALLEITRKNLGMTAICDD-----DMNIIGIFTDGDLRRVFDT 88 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHHHHHHHHHHHTSSEEEEECT-----TCBEEEEEEHHHHHHHHCS
T ss_pred cCHHHHhcCCCCCeEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCcEEEEecHHHHHHHHhc
Confidence 468889998 8999999999999999999999999999997 5789999999999987654
No 87
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.28 E-value=1.6e-06 Score=73.81 Aligned_cols=59 Identities=10% Similarity=0.159 Sum_probs=53.4
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCC--cEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVS--PVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~--~lvGIITr~DLl~~~~~ 432 (447)
+.++++|.+++.++++++++.+|.++|.+.+.+++||+|+ ++ +++|+||++|+++...+
T Consensus 5 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~~~Givt~~dl~~~~~~ 65 (141)
T 2rih_A 5 IRTSELLKRPPVSLPETATIREVATELAKNRVGLAVLTAR-----DNPKRPVAVVSERDILRAVAQ 65 (141)
T ss_dssp CBGGGGCCSCCEEEETTCBHHHHHHHHHHHTCSEEEEEET-----TEEEEEEEEEEHHHHHHHHHT
T ss_pred eEHHHHhcCCCeEeCCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcceeEEEEEHHHHHHHHhc
Confidence 4577899999999999999999999999999999999997 45 89999999999987654
No 88
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.28 E-value=9.3e-07 Score=73.11 Aligned_cols=57 Identities=21% Similarity=0.328 Sum_probs=51.6
Q ss_pred ccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 371 LHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 371 l~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
++++|.+++.++++++++.++.+.|.+.+.+++||+|+ +++++|+||++|+.+...+
T Consensus 3 v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~G~vt~~dl~~~~~~ 59 (122)
T 3kpb_A 3 VKDILSKPPITAHSNISIMEAAKILIKHNINHLPIVDE-----HGKLVGIITSWDIAKALAQ 59 (122)
T ss_dssp HHHHCCSCCCCEETTSBHHHHHHHHHHHTCSCEEEECT-----TSBEEEEECHHHHHHHHHT
T ss_pred hHHhhCCCCEEeCCCCcHHHHHHHHHHcCCCeEEEECC-----CCCEEEEEEHHHHHHHHHh
Confidence 45678889999999999999999999999999999997 5789999999999987654
No 89
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=98.26 E-value=2e-06 Score=72.77 Aligned_cols=57 Identities=23% Similarity=0.239 Sum_probs=51.3
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFN 430 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~ 430 (447)
..++++|.++++++++++++.+|.+.|.+.+.+++||+|+ +++++|+||++|+++..
T Consensus 7 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~ 63 (138)
T 2yzi_A 7 APIKVYMTKKLLGVKPSTSVQEASRLMMEFDVGSLVVIND-----DGNVVGFFTKSDIIRRV 63 (138)
T ss_dssp SBGGGTCBCCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHT
T ss_pred hhHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHH
Confidence 4577889999999999999999999999999999999986 56899999999998543
No 90
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=98.25 E-value=1.6e-06 Score=75.88 Aligned_cols=59 Identities=22% Similarity=0.398 Sum_probs=53.4
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+.++++|.++++++.+++++.+|.++|.+.+.+.+||+|+ +++++|+||++|+++....
T Consensus 5 ~~v~dim~~~~~~v~~~~tl~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~~ 63 (160)
T 2o16_A 5 IKVEDMMTRHPHTLLRTHTLNDAKHLMEALDIRHVPIVDA-----NKKLLGIVSQRDLLAAQES 63 (160)
T ss_dssp CBGGGTSEESCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHHH
Confidence 4577899899999999999999999999999999999986 5689999999999987654
No 91
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=98.19 E-value=3e-06 Score=71.60 Aligned_cols=58 Identities=19% Similarity=0.236 Sum_probs=52.1
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHH-HHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDL-RAFNI 431 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DL-l~~~~ 431 (447)
..++++|.+++.++++++++.+|.++|.+.+.+++||+|+ +++++|+||++|+ .+...
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 66 (138)
T 2p9m_A 8 IKVKDVMTKNVITAKRHEGVVEAFEKMLKYKISSLPVIDD-----ENKVIGIVTTTDIGYNLIR 66 (138)
T ss_dssp CBGGGTSBCSCCCEETTSBHHHHHHHHHHHTCCEEEEECT-----TCBEEEEEEHHHHHHHHTT
T ss_pred CCHHHhhcCCceEECCCCcHHHHHHHHHHCCCcEEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 4577899889999999999999999999999999999987 5689999999999 77544
No 92
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.18 E-value=2.7e-06 Score=70.47 Aligned_cols=56 Identities=18% Similarity=0.093 Sum_probs=50.1
Q ss_pred ccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 371 LHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 371 l~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
++++|.+++.++++++++.+|.++|.+.+.+++||+|+ ++++|+||++|+++...+
T Consensus 3 v~~~m~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~------~~~~G~it~~dl~~~~~~ 58 (125)
T 1pbj_A 3 VEDVMVTDVDTIDITASLEDVLRNYVENAKGSSVVVKE------GVRVGIVTTWDVLEAIAE 58 (125)
T ss_dssp HHHHCBCSCCEEETTCBHHHHHHHHHHHCCCEEEEEET------TEEEEEEEHHHHHHHHHH
T ss_pred HHHhcCCCceEECCCCcHHHHHHHHHHcCCCEEEEEeC------CeeEEEEeHHHHHHHHhc
Confidence 45678889999999999999999999999999999984 579999999999977654
No 93
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.18 E-value=3.7e-06 Score=73.30 Aligned_cols=57 Identities=26% Similarity=0.413 Sum_probs=51.3
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
+.++++|.+ ++++.+++++.+|.++|.+.+.+++||+|+ +++++|+||.+|+++...
T Consensus 17 ~~v~~im~~-~~~v~~~~~~~~a~~~m~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~ 73 (159)
T 3fv6_A 17 LQVKDFQSI-PVVIHENVSVYDAICTMFLEDVGTLFVVDR-----DAVLVGVLSRKDLLRASI 73 (159)
T ss_dssp CBGGGSCBC-CCEEETTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHT
T ss_pred CCHHHHcCC-CEEECCCCcHHHHHHHHHHCCCCEEEEEcC-----CCcEEEEEeHHHHHHHhh
Confidence 567888986 679999999999999999999999999997 568999999999998763
No 94
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.15 E-value=1.9e-06 Score=72.13 Aligned_cols=59 Identities=17% Similarity=0.183 Sum_probs=54.1
Q ss_pred ccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 253 LTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 253 l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
.+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|+++|+++.+.+
T Consensus 68 ~~v~~~m~~--~~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~-----------g~~~Giit~~dll~~l~~ 126 (128)
T 3gby_A 68 EKLGEELLE--TVRSYRPGEQLFDNLISVAAAKCSVVPLADED-----------GRYEGVVSRKRILGFLAE 126 (128)
T ss_dssp CBCCGGGCB--CCCCBCTTSBGGGSHHHHHHCSSSEEEEECTT-----------CBEEEEEEHHHHHHHHHT
T ss_pred CcHHHHccC--CCcEECCCCCHHHHHHHHHhCCCcEEEEECCC-----------CCEEEEEEHHHHHHHHHh
Confidence 678999998 88899999999999999999999999999977 899999999999987653
No 95
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.15 E-value=2e-06 Score=72.32 Aligned_cols=60 Identities=12% Similarity=0.237 Sum_probs=51.0
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|.+ ..+++++++++.+|.++|.+.+.+++||+|+ + .++++|+||.+|+++...+
T Consensus 6 ~~v~~iM~~~~~v~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~-~~~~~Givt~~dl~~~~~~ 67 (130)
T 3i8n_A 6 VPVTQVMTPRPVVFRVDATMTINEFLDKHKDTPFSRPLVYSE---Q-KDNIIGFVHRLELFKMQQS 67 (130)
T ss_dssp -CCTTTSCCBCCCCEEETTSBHHHHHHHTTTCSCSCCEEESS---S-TTCEEEECCHHHHHHHHHT
T ss_pred CCHhhCCCcHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEeC---C-CCcEEEEEEHHHHHHHHhc
Confidence 457888984 4558999999999999999999999999986 2 2689999999999988654
No 96
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.13 E-value=1.1e-06 Score=73.56 Aligned_cols=57 Identities=14% Similarity=0.203 Sum_probs=49.2
Q ss_pred CccccccCC--CceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCC-CcEEEEEeHHHHHHHHH
Q 013262 370 DLHPLTNTT--PYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGV-SPVVGILTRQDLRAFNI 431 (447)
Q Consensus 370 dl~~im~~~--p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~-~~lvGIITr~DLl~~~~ 431 (447)
.++++|.+. ++++++++++.+|.++|.+.+.+++||+|+ + ++++|+||.+|+++...
T Consensus 4 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~vGivt~~dl~~~~~ 63 (127)
T 3nqr_A 4 RVRDIMIPRSQMITLKRNQTLDECLDVIIESAHSRFPVISE-----DKDHIEGILMAKDLLPFMR 63 (127)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS-----STTCEEEEEEGGGGGGGGS
T ss_pred CHHHhcccHHHeEEEcCCCCHHHHHHHHHhCCCCEEEEEcC-----CCCcEEEEEEHHHHHHHHh
Confidence 355677744 889999999999999999999999999986 4 68999999999987653
No 97
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=98.13 E-value=2.1e-06 Score=73.77 Aligned_cols=58 Identities=12% Similarity=0.122 Sum_probs=51.0
Q ss_pred cCcccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
+.++++|. .+++++++++++.+|.++|.+.+.+++||+|+ +++++|+||++|+++...
T Consensus 15 ~~v~~im~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~pVvd~-----~~~~~Givt~~dl~~~~~ 74 (150)
T 3lqn_A 15 IFVKDLMISSEKVAHVQIGNGLEHALLVLVKSGYSAIPVLDP-----MYKLHGLISTAMILDGIL 74 (150)
T ss_dssp CBHHHHSEEGGGSCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHTB
T ss_pred CChhhcccCCCceEEECCCCcHHHHHHHHHHcCCcEEEEECC-----CCCEEEEEEHHHHHHHHH
Confidence 45667777 45889999999999999999999999999987 578999999999998764
No 98
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=98.13 E-value=2.2e-06 Score=72.20 Aligned_cols=58 Identities=2% Similarity=-0.014 Sum_probs=49.5
Q ss_pred cccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 371 LHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 371 l~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
++++|. ++++++++++++.+|.++|.+.+.+++||+++ ++++++|+||.+|++++..+
T Consensus 4 v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVv~~----~~~~lvGivt~~dl~~~~~~ 63 (130)
T 3hf7_A 4 VNDIMVPRNEIVGIDINDDWKSIVRQLTHSPHGRIVLYRD----SLDDAISMLRVREAYRLMTE 63 (130)
T ss_dssp HHHHSEEGGGCCEEETTSCHHHHHHHHHTCSSSEEEEESS----SGGGEEEEEEHHHHHHHHTS
T ss_pred HHHhCccHHHEEEEcCCCCHHHHHHHHHHCCCCeEEEEcC----CCCcEEEEEEHHHHHHHHhc
Confidence 456674 46789999999999999999999999999964 14689999999999987654
No 99
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=98.12 E-value=3.3e-06 Score=73.83 Aligned_cols=59 Identities=17% Similarity=0.284 Sum_probs=52.4
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
...+++++|.+ ++.++++++++.++++.|.+++ .+||||++ |+++|+||++|+++.+.+
T Consensus 84 ~~~~v~~im~~--~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~-----------g~l~GiiT~~Dil~~~~~ 142 (156)
T 3k6e_A 84 ADTDIVHMTKT--DVAVVSPDFTITEVLHKLVDES--FLPVVDAE-----------GIFQGIITRKSILKAVNA 142 (156)
T ss_dssp TTSBGGGTCBC--SCCCBCTTCCHHHHHHHTTTSS--EEEEECTT-----------SBEEEEEEHHHHHHHHHH
T ss_pred cccCHHHhhcC--CceecccccHHHHHHHHHHHcC--CeEEEecC-----------CEEEEEEEHHHHHHHHHH
Confidence 46789999999 8999999999999999998654 59999987 899999999999987754
No 100
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.12 E-value=1.6e-06 Score=72.90 Aligned_cols=58 Identities=12% Similarity=0.155 Sum_probs=49.6
Q ss_pred Ccccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 370 DLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 370 dl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
.++++|. ++++++++++++.+|.++|.+.+.+++||+|+ + .++++|+||.+|++++..
T Consensus 6 ~v~diM~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~---~-~~~~~Givt~~dl~~~~~ 65 (129)
T 3jtf_A 6 TVADIMVPRSRMDLLDISQPLPQLLATIIETAHSRFPVYED---D-RDNIIGILLAKDLLRYML 65 (129)
T ss_dssp BHHHHCEEGGGCCCEETTSCHHHHHHHHHHSCCSEEEEESS---S-TTCEEEEEEGGGGGGGGT
T ss_pred CHHHhCccHHHeEEECCCCCHHHHHHHHHHcCCCEEEEEcC---C-CCcEEEEEEHHHHHhHhc
Confidence 4566777 56789999999999999999999999999986 2 268999999999987653
No 101
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=98.11 E-value=3.2e-06 Score=73.25 Aligned_cols=58 Identities=17% Similarity=0.277 Sum_probs=51.5
Q ss_pred Ccccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 370 DLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 370 dl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
.++++|. +++.++++++++.+|.++|.+.+.+++||+|+ +|+++|+||.+|+++....
T Consensus 16 ~v~dim~p~~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~-----~~~~~Giit~~dl~~~~~~ 75 (156)
T 3ctu_A 16 QEETFLTPAKNLAVLIDTHNADHATLLLSQMTYTRVPVVTD-----EKQFVGTIGLRDIMAYQME 75 (156)
T ss_dssp TGGGGEEEGGGCCCEETTSBHHHHHHHHTTCSSSEEEEECC------CBEEEEEEHHHHHHHHHH
T ss_pred HHHHHcCcccCceEECCCCCHHHHHHHHHHCCCceEeEECC-----CCEEEEEEcHHHHHHHHHh
Confidence 4677887 67899999999999999999999999999987 5789999999999988764
No 102
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=98.11 E-value=3.8e-06 Score=73.06 Aligned_cols=61 Identities=13% Similarity=0.183 Sum_probs=52.6
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|.++++++++++++.+|.++|.+.+.+++||+|+ +.+++++|+||++|+.+...+
T Consensus 13 ~~v~dim~~~~~~v~~~~~~~~a~~~~~~~~~~~~pVvd~---~~~~~~~Givt~~dl~~~~~~ 73 (164)
T 2pfi_A 13 VRVEHFMNHSITTLAKDTPLEEVVKVVTSTDVTEYPLVES---TESQILVGIVQRAQLVQALQA 73 (164)
T ss_dssp CBHHHHCBCCCCCEETTCBHHHHHHHHHTCCCSEEEEESC---TTTCBEEEEEEHHHHHHHHHC
T ss_pred CCHHHHcCCCCeEECCCCcHHHHHHHHHhCCCCceeEEec---CCCCEEEEEEEHHHHHHHHHh
Confidence 4567788899999999999999999999999999999983 114689999999999987643
No 103
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.11 E-value=6.1e-06 Score=73.77 Aligned_cols=58 Identities=21% Similarity=0.198 Sum_probs=53.0
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
+.++++|.++++++++++++.+|+++|.+.+.+++||+|+ +++++|+||.+|+++...
T Consensus 9 ~~v~~im~~~~~~v~~~~~l~ea~~~~~~~~~~~~pVvd~-----~g~~vGivt~~dl~~~~~ 66 (184)
T 1pvm_A 9 MRVEKIMNSNFKTVNWNTTVFDAVKIMNENHLYGLVVKDD-----NGNDVGLLSERSIIKRFI 66 (184)
T ss_dssp CBGGGTSBTTCCEEETTCBHHHHHHHHHHHTCCEEEEECT-----TSCEEEEEEHHHHHHHTG
T ss_pred cCHHHhcCCCCeEECCCCcHHHHHHHHHHcCCCEEEEEcC-----CCcEEEEEeHHHHHHHHh
Confidence 5678899999999999999999999999999999999986 468999999999998754
No 104
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=98.10 E-value=3e-06 Score=73.77 Aligned_cols=59 Identities=8% Similarity=0.077 Sum_probs=52.0
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|.+ +++++++++++.+|.++|.+.+.+.+||+|+ +++++|+||++|+++....
T Consensus 14 ~~v~~im~~~~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~-----~~~lvGivt~~dl~~~~~~ 74 (159)
T 1yav_A 14 ATVGQFMIEADKVAHVQVGNNLEHALLVLTKTGYTAIPVLDP-----SYRLHGLIGTNMIMNSIFG 74 (159)
T ss_dssp CBHHHHSEEGGGSCCEETTCBHHHHHHHHHHHCCSEEEEECT-----TCBEEEEEEHHHHHHHHBC
T ss_pred hhHHHHhCCccceEEECCCCcHHHHHHHHHhCCCcEEEEECC-----CCCEEEEeEHHHHHHHhhh
Confidence 456677877 8899999999999999999999999999987 5689999999999987643
No 105
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.10 E-value=4.2e-06 Score=70.27 Aligned_cols=60 Identities=20% Similarity=0.363 Sum_probs=54.5
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++|.+ ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|+++|++..+.+
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~-----------g~~~Giit~~dll~~~~~ 125 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPITGALALMRQFNIRHLPVVDDK-----------GNLKGIISIRDITRAIDD 125 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SCEEEEEEHHHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHHHHHHHHHHcCCCEEEEECCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4678999998 88899999999999999999999999999976 899999999999887654
No 106
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=98.10 E-value=4.7e-06 Score=72.13 Aligned_cols=58 Identities=10% Similarity=0.187 Sum_probs=52.2
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
..++++|.+ +++++.+++++.+|.++|.+.+.+++||+|+ +++++|+||++|+++...
T Consensus 11 ~~v~~im~~~~~~~~v~~~~~~~~a~~~m~~~~~~~~pVvd~-----~~~~~Givt~~dl~~~~~ 70 (157)
T 2emq_A 11 MTVKPFLIPADKVAHVQPGNYLDHALLVLTKTGYSAIPVLDT-----SYKLHGLISMTMMMDAIL 70 (157)
T ss_dssp CBSTTTCEEGGGSCCBCTTSBHHHHHHHHHHSSSSEEEEECT-----TCCEEEEEEHHHHHHHSB
T ss_pred CcHHhhccCCccceEECCCCcHHHHHHHHHHCCceEEEEEcC-----CCCEEEEeeHHHHHHHHh
Confidence 567888986 8889999999999999999999999999986 567999999999998754
No 107
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=98.09 E-value=6e-06 Score=75.61 Aligned_cols=60 Identities=13% Similarity=0.221 Sum_probs=55.4
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
+.+++++|.+ +++++++++++.++++.|.+++.+.+||||++ |+++|+||.+|++..+..
T Consensus 115 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~-----------g~lvGiIT~~Dil~~i~~ 174 (205)
T 3kxr_A 115 HEPLISLLSE--DSRALTANTTLLDAAEAIEHSREIELPVIDDA-----------GELIGRVTLRAATALVRE 174 (205)
T ss_dssp TSBGGGGCCS--SCCCEETTSCHHHHHHHHHTSSCSEEEEECTT-----------SBEEEEEEHHHHHHHHHH
T ss_pred cchHHHHhcC--CCeEECCCCCHHHHHHHHHhcCCCEEEEEcCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4679999998 88999999999999999999999999999987 899999999999987754
No 108
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.09 E-value=5.4e-06 Score=69.86 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=54.5
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
...+++++|.+ ++.++++++++.++++.|.+++.+.+||+| + |+++|+|+++|+++.+.+
T Consensus 72 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-----------g~~~Giit~~dll~~~~~ 131 (135)
T 2rc3_A 72 KDTQVKEIMTR--QVAYVDLNNTNEDCMALITEMRVRHLPVLD-D-----------GKVIGLLSIGDLVKDAIS 131 (135)
T ss_dssp GGSBGGGTSBC--SCCCBCTTCBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHC
T ss_pred ccCCHHHhccC--CCeEECCCCcHHHHHHHHHHhCCCEEEEEe-C-----------CEEEEEEEHHHHHHHHHh
Confidence 45789999998 889999999999999999999999999999 5 899999999999886643
No 109
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.08 E-value=3.5e-06 Score=73.91 Aligned_cols=60 Identities=20% Similarity=0.148 Sum_probs=52.3
Q ss_pred cCccccccC---CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 369 IDLHPLTNT---TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 369 idl~~im~~---~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
+.++++|.+ +++++.+++++.+|.++|.+.+.+.+||+|+ +++++|+||++|+++...+.
T Consensus 24 ~~v~dim~~~~~~~~~v~~~~~l~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~~ 86 (165)
T 3fhm_A 24 TFVKDLLDRKGRDVVTVGPDVSIGEAAGTLHAHKIGAVVVTDA-----DGVVLGIFTERDLVKAVAGQ 86 (165)
T ss_dssp CBHHHHHHHHCSCCCEECTTSBHHHHHHHHHHHTCSEEEEECT-----TSCEEEEEEHHHHHHHHHHH
T ss_pred cCHHHHhccCCCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcC-----CCeEEEEEEHHHHHHHHHhc
Confidence 456677774 6899999999999999999999999999997 57899999999999876653
No 110
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.08 E-value=3.8e-06 Score=71.91 Aligned_cols=60 Identities=23% Similarity=0.381 Sum_probs=54.9
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++|.+ +++++++++++.++++.|.+++.+.+||+|++ |+++|+|+++|+++.+.+
T Consensus 84 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~-----------g~~~Giit~~dil~~~~~ 143 (152)
T 4gqw_A 84 GKLVGDLMTP--APLVVEEKTNLEDAAKILLETKYRRLPVVDSD-----------GKLVGIITRGNVVRAALQ 143 (152)
T ss_dssp CCBHHHHSEE--SCCCEESSSBHHHHHHHHHHSSCCEEEEECTT-----------SBEEEEEEHHHHHHHHHC
T ss_pred cccHHHhcCC--CceEECCCCcHHHHHHHHHHCCCCEEEEECCC-----------CcEEEEEEHHHHHHHHHh
Confidence 4679999998 88899999999999999999999999999976 899999999999987754
No 111
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.08 E-value=8.7e-06 Score=69.04 Aligned_cols=54 Identities=7% Similarity=0.090 Sum_probs=49.5
Q ss_pred cccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 374 LTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 374 im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
+|.++++++++++++.+|+++|.+.+.+.+||+|+ +++++|+||++|+++...+
T Consensus 16 ~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~~~~~ 69 (144)
T 2nyc_A 16 ITQDNMKSCQMTTPVIDVIQMLTQGRVSSVPIIDE-----NGYLINVYEAYDVLGLIKG 69 (144)
T ss_dssp CBCSSCCCBCTTSBHHHHHHHHHHHTCSEEEEECT-----TCBEEEEEEHHHHHHHHHT
T ss_pred CCCCCceEECCCCcHHHHHHHHHHcCcceeeEEcC-----CCcEEEEEcHHHHHHHhcc
Confidence 78888999999999999999999999999999987 5789999999999987654
No 112
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.08 E-value=3.8e-06 Score=74.27 Aligned_cols=60 Identities=22% Similarity=0.384 Sum_probs=55.3
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++|.+ +++++++++++.++++.|.+++++.+||+|++ |+++|+|+++|+++.+.+
T Consensus 97 ~~~v~~~m~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~~vGiit~~dil~~~~~ 156 (180)
T 3sl7_A 97 GKVVGDLMTP--SPLVVRDSTNLEDAARLLLETKFRRLPVVDAD-----------GKLIGILTRGNVVRAALQ 156 (180)
T ss_dssp TCBHHHHSEE--SCCCEETTSBHHHHHHHHTTSTTCEEEEECTT-----------CBEEEEEEHHHHHHHHHH
T ss_pred cccHHHHhCC--CceEeCCCCcHHHHHHHHHHcCCCEEEEECCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4679999998 88999999999999999999999999999977 899999999999987754
No 113
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.08 E-value=2e-06 Score=73.06 Aligned_cols=58 Identities=10% Similarity=0.171 Sum_probs=49.4
Q ss_pred Ccccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 370 DLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 370 dl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
.++++|. +++.++++++++.+|+++|.+.+.+++||+|+ + .++++|+||.+|++++..
T Consensus 4 ~v~~iM~~~~~~~~v~~~~~v~~a~~~m~~~~~~~~pVvd~---~-~~~~vGivt~~dl~~~~~ 63 (136)
T 3lfr_A 4 QVRDIMVPRSQMISIKATQTPREFLPAVIDAAHSRYPVIGE---S-HDDVLGVLLAKDLLPLIL 63 (136)
T ss_dssp BHHHHSEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS---S-TTCEEEEEEGGGGGGGGG
T ss_pred ChHhccccHHHEEEEcCCCCHHHHHHHHHhCCCCEEEEEcC---C-CCcEEEEEEHHHHHHHHH
Confidence 3456676 56789999999999999999999999999986 2 268999999999998654
No 114
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.06 E-value=7.1e-06 Score=70.96 Aligned_cols=59 Identities=14% Similarity=0.177 Sum_probs=53.8
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++| + ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|++.|++..+..
T Consensus 85 ~~~v~~~m-~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~-----------g~~vGivt~~dil~~l~~ 143 (153)
T 3oco_A 85 KAKISTIM-R--DIVSVPENMKVPDVMEEMSAHRVPMAIVIDEY-----------GGTSGIITDKDVYEELFG 143 (153)
T ss_dssp TSBGGGTC-B--CCEEEETTSBHHHHHHHHHHTTCSCEEEECTT-----------SCEEEEECHHHHHHHHHC
T ss_pred CCcHHHHh-C--CCeEECCCCCHHHHHHHHHHcCCcEEEEEeCC-----------CCEEEEeeHHHHHHHHhc
Confidence 46789999 7 78999999999999999999999999999987 899999999999987654
No 115
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.05 E-value=3.4e-06 Score=70.81 Aligned_cols=55 Identities=18% Similarity=0.197 Sum_probs=49.7
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRA 428 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~ 428 (447)
..++++|.+++.++++++++.++.++|.+.+.+.+||+|+ +++++|+||++|+++
T Consensus 8 ~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~-----~~~~~Givt~~dl~~ 62 (133)
T 1y5h_A 8 TTARDIMNAGVTCVGEHETLTAAAQYMREHDIGALPICGD-----DDRLHGMLTDRDIVI 62 (133)
T ss_dssp CCHHHHSEETCCCEETTSBHHHHHHHHHHHTCSEEEEECG-----GGBEEEEEEHHHHHH
T ss_pred cCHHHHhcCCceEeCCCCCHHHHHHHHHHhCCCeEEEECC-----CCeEEEEEeHHHHHH
Confidence 3567788888999999999999999999999999999986 578999999999984
No 116
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=98.04 E-value=9.6e-06 Score=72.10 Aligned_cols=60 Identities=20% Similarity=0.073 Sum_probs=52.0
Q ss_pred cCcccccc--CCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTN--TTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~--~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|. +.++++++++++.+|+++|.+.+.+++||+|+ + .++++|+||.+|++++..+
T Consensus 36 ~~v~diM~~~~~v~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~-~~~lvGivt~~Dl~~~~~~ 97 (173)
T 3ocm_A 36 RSIRSIMTPRTDVSWVNIDDDAATIRQQLTAAPHSFFPVCRG---S-LDEVVGIGRAKDLVADLIT 97 (173)
T ss_dssp SCSTTTSEEGGGCCCEETTSCHHHHHHHHHHSSCSEEEEESS---S-TTSEEEEEEHHHHHHHHHH
T ss_pred CCHHHhCCcHHHeEEEeCCCCHHHHHHHHHhCCCCEEEEEeC---C-CCCEEEEEEHHHHHHHHhc
Confidence 45788896 46789999999999999999999999999986 2 2689999999999988654
No 117
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.03 E-value=8.4e-06 Score=70.77 Aligned_cols=57 Identities=16% Similarity=0.170 Sum_probs=51.9
Q ss_pred cCccccccCCCceecCCCCHHHHHHHHHHcCCCE-EEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRH-LLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~-LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
..++++|.++++++++++++.+|+++|.+.+.+. +||+|+ + +++|+||++|+++...
T Consensus 16 ~~v~~im~~~~~~v~~~~tl~ea~~~m~~~~~~~~~~Vvd~-----~-~~vGivt~~dl~~~~~ 73 (157)
T 1o50_A 16 KDVCKLISLKPTVVEEDTPIEEIVDRILEDPVTRTVYVARD-----N-KLVGMIPVMHLLKVSG 73 (157)
T ss_dssp HHHTTSSCCCCEEECTTCBHHHHHHHHHHSTTCCEEEEEET-----T-EEEEEEEHHHHHHHHH
T ss_pred ccHhhcccCCCceECCCCCHHHHHHHHHhCCCCccEEEEEC-----C-EEEEEEEHHHHHHHHh
Confidence 3577899999999999999999999999999999 999997 4 8999999999998754
No 118
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.01 E-value=3.6e-06 Score=73.22 Aligned_cols=59 Identities=17% Similarity=0.232 Sum_probs=51.5
Q ss_pred cCccccccC--CCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHHHHH
Q 013262 369 IDLHPLTNT--TPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRAFNI 431 (447)
Q Consensus 369 idl~~im~~--~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~~~~ 431 (447)
..++++|.+ +++++++++++.+|.++|.+.+.+++||+|+ + .++++|+||.+|++++..
T Consensus 38 ~~v~diM~~~~~~~~v~~~~~i~~a~~~m~~~~~~~~pVvd~---~-~~~lvGivt~~dl~~~~~ 98 (156)
T 3oi8_A 38 LEVRDAMITRSRMNVLKENDSIERITAYVIDTAHSRFPVIGE---D-KDEVLGILHAKDLLKYMF 98 (156)
T ss_dssp CBGGGTCEEGGGCCCEETTCCHHHHHHHHHHHCCSEEEEESS---S-TTCEEEEEEGGGGGGGSS
T ss_pred CCHhheeeeHHHeEEECCCCCHHHHHHHHHHCCCCEEEEEcC---C-CCcEEEEEEHHHHHHHHH
Confidence 467889986 6889999999999999999999999999986 2 148999999999987643
No 119
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=98.01 E-value=6.1e-06 Score=73.34 Aligned_cols=59 Identities=20% Similarity=0.171 Sum_probs=51.4
Q ss_pred cCccccccCC----Ccee--cCCCCHHHHHHHHHHcCCCEEEEE--eCcccCCCCcEEEEEeHHHHHHHHHh
Q 013262 369 IDLHPLTNTT----PYTV--IESMSVAKAMVLFRQVGLRHLLVV--PKYEAAGVSPVVGILTRQDLRAFNIL 432 (447)
Q Consensus 369 idl~~im~~~----p~tV--~~~~sL~~a~~lf~~~gl~~LpVV--d~~~~~g~~~lvGIITr~DLl~~~~~ 432 (447)
..++++|.+. ++++ .+++++.+|.++|.+.+.+.+||+ |+ +++++|+||++|+++....
T Consensus 11 ~~v~dim~~~~~~~~~~v~~~~~~~~~~a~~~~~~~~~~~~pVv~~d~-----~~~lvGiit~~dl~~~~~~ 77 (185)
T 2j9l_A 11 TLAMDVMKPRRNDPLLTVLTQDSMTVEDVETIISETTYSGFPVVVSRE-----SQRLVGFVLRRDLIISIEN 77 (185)
T ss_dssp CBHHHHSBSCTTSCCCCCEESSCEEHHHHHHHHHHCCCSEEEEESCTT-----TCBEEEEEEHHHHHHHHHH
T ss_pred CcHHHHhcccccCceEEEecCCCccHHHHHHHHHhcCCCceeEEEECC-----CCeEEEEEEHHHHHHHHHh
Confidence 4566777776 7888 999999999999999999999999 55 5789999999999987664
No 120
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=97.97 E-value=1.2e-05 Score=69.47 Aligned_cols=58 Identities=19% Similarity=0.302 Sum_probs=51.7
Q ss_pred ccccccccc------CCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHH
Q 013262 252 TLTVGELID------AKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 322 (447)
Q Consensus 252 ~l~v~diM~------~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L 322 (447)
..+++++|. + ++.++++++++.++++.|.+++.+.+||+|++ |+++|+|+++|+++.+
T Consensus 86 ~~~v~~~m~~~~~~~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~~vGiit~~dil~~l 149 (152)
T 2uv4_A 86 DVSVTKALQHRSHYFE--GVLKCYLHETLETIINRLVEAEVHRLVVVDEN-----------DVVKGIVSLSDILQAL 149 (152)
T ss_dssp TSBGGGGGGTCCHHHH--TCSEECTTSBHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHH
T ss_pred cchHHHHHhhhhcccC--CCeEECCCCcHHHHHHHHHHcCCeEEEEECCC-----------CeEEEEEEHHHHHHHH
Confidence 356788886 6 78899999999999999999999999999986 8999999999998765
No 121
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=97.97 E-value=9.2e-06 Score=70.37 Aligned_cols=60 Identities=25% Similarity=0.370 Sum_probs=54.9
Q ss_pred ccccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 251 RTLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 251 ~~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
...+++++|.+ ++.++++++++.++++.|.+++++.+||+| + |+++|+|+++|+++.+..
T Consensus 76 ~~~~v~~~m~~--~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~-----------g~~~Giit~~dil~~l~~ 135 (157)
T 4fry_A 76 KATRVEEIMTA--KVRYVEPSQSTDECMALMTEHRMRHLPVLD-G-----------GKLIGLISIGDLVKSVIA 135 (157)
T ss_dssp SSCBHHHHSBS--SCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-T-----------TEEEEEEEHHHHHHHHHT
T ss_pred cccCHHHHcCC--CCcEECCCCcHHHHHHHHHHcCCCEEEEEE-C-----------CEEEEEEEHHHHHHHHHH
Confidence 35789999998 889999999999999999999999999999 5 899999999999987765
No 122
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=97.84 E-value=2.2e-05 Score=82.30 Aligned_cols=61 Identities=20% Similarity=0.330 Sum_probs=55.2
Q ss_pred ccCccccccCCCceecCC-CCHHHHHHHHHHcCCCEEEEEe-CcccCCCCcEEEEEeHHHHHHHHHhh
Q 013262 368 YIDLHPLTNTTPYTVIES-MSVAKAMVLFRQVGLRHLLVVP-KYEAAGVSPVVGILTRQDLRAFNILT 433 (447)
Q Consensus 368 ~idl~~im~~~p~tV~~~-~sL~~a~~lf~~~gl~~LpVVd-~~~~~g~~~lvGIITr~DLl~~~~~~ 433 (447)
...++++|.++++++.++ +++.+|+++|.+.+++++||+| + +++++|+||++||++.+...
T Consensus 383 ~~~V~diM~~~~vtv~~~~~tv~ea~~~m~~~~~~~lpVvd~~-----~g~lvGiVt~~Dll~~l~~~ 445 (527)
T 3pc3_A 383 SLAIAELELPAPPVILKSDATVGEAIALMKKHRVDQLPVVDQD-----DGSVLGVVGQETLITQIVSM 445 (527)
T ss_dssp TSBGGGGCCCCCSCCEETTCBHHHHHHHHHHHTCSEEEEECTT-----TCCEEEEEEHHHHHHHHHHH
T ss_pred CCcHHHhCcCCCeEEcCCCCcHHHHHHHHHHcCCCeEEEEECC-----CCEEEEEEEHHHHHHHHHhc
Confidence 356889999999999999 9999999999999999999999 5 46899999999999887654
No 123
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.73 E-value=3e-05 Score=74.28 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=53.7
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++|.+ +++++++++++.++++.|.+++.+.+||||++ |+++|+||.+|++..+..
T Consensus 198 ~~~v~~im~~--~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-----------g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 198 RTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-----------GRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp TCBSTTTSBS--SCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHC--
T ss_pred CCcHHHHhCC--CCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4678999988 88999999999999999999999999999987 899999999999876543
No 124
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.72 E-value=3.4e-05 Score=74.24 Aligned_cols=60 Identities=13% Similarity=0.307 Sum_probs=54.9
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
..+++++|.+ +++++++++++.++.+.|.+++.+.+||||++ |+++|+||.+|++..+..
T Consensus 200 ~~~v~~im~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~-----------g~lvGiIT~~Dil~~i~~ 259 (286)
T 2oux_A 200 DTLIADILNE--RVISVHVGDDQEDVAQTIRDYDFLAVPVTDYD-----------DHLLGIVTVDDIIDVIDD 259 (286)
T ss_dssp TSBHHHHSBS--CCCCEETTSBHHHHHHHHHHHTCSEEEEECTT-----------CBEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHcCC--CCeeecCCCCHHHHHHHHHHcCCcEEEEEcCC-----------CeEEEEEEHHHHHHHHHH
Confidence 4678999998 88999999999999999999999999999987 899999999999987754
No 125
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.59 E-value=8.2e-05 Score=76.81 Aligned_cols=60 Identities=17% Similarity=0.317 Sum_probs=55.4
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
+.+++++|++ +++++++++++.++.+.|++++.+.+||||++ |+++|+||.+|+.+.+..
T Consensus 218 ~~~v~dim~~--~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~-----------g~lvGiIT~~Dil~~i~~ 277 (473)
T 2zy9_A 218 RTRVAEIMNP--KVVYVRTDTDQEEVARLMADYDFTVLPVVDEE-----------GRLVGIVTVDDVLDVLEA 277 (473)
T ss_dssp TSBGGGTSBS--SCCCEESSSBHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHHHH
T ss_pred CCcHHHHhCC--CCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC-----------CEEEEEEehHhhHHHHHH
Confidence 5679999988 89999999999999999999999999999987 899999999999987754
No 126
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=97.53 E-value=2.8e-05 Score=80.92 Aligned_cols=61 Identities=15% Similarity=0.285 Sum_probs=0.0
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHH
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALK 323 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~ 323 (447)
+.+++|+|++..+++++++++++.++++.|.+++++.+||||++ ++++|+|+++|+++.+.
T Consensus 160 ~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~-----------g~lvGiIT~~Dil~~~~ 220 (503)
T 1me8_A 160 ETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDD-----------QHLRYIVFRKDYDRSQV 220 (503)
T ss_dssp ------------------------------------------------------------------------
T ss_pred cCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CeEEEEEEecHHHHhhh
Confidence 46799999982129999999999999999999999999999987 89999999999987554
No 127
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=97.41 E-value=0.00052 Score=71.40 Aligned_cols=61 Identities=16% Similarity=0.297 Sum_probs=54.6
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
+.+++++|++ .+++++++++++.++++.|.+++.+.+||||++ ++++|+|+++|+++.+..
T Consensus 174 ~~~V~~vM~~-~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~-----------g~l~GiIT~~Dil~~~~~ 234 (511)
T 3usb_A 174 SIKISDVMTK-EQLITAPVGTTLSEAEKILQKYKIEKLPLVDNN-----------GVLQGLITIKDIEKVIEF 234 (511)
T ss_dssp SSBHHHHCCC-CCCCCEETTCCHHHHHHHHHHHTCSEEEEECTT-----------SBEEEEEEHHHHHHHHHC
T ss_pred CCcHHHhccc-CCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCC-----------CCEeeeccHHHHHHhhhc
Confidence 5678999985 267899999999999999999999999999987 999999999999887654
No 128
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.14 E-value=0.00041 Score=71.93 Aligned_cols=52 Identities=31% Similarity=0.393 Sum_probs=46.4
Q ss_pred ccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHH
Q 013262 371 LHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLR 427 (447)
Q Consensus 371 l~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl 427 (447)
.+++|..+|+++++++++.++.++|.+.+.+.+||+|+ +++++|+||++|+.
T Consensus 91 ~~~~m~~d~v~v~~~~tv~ea~~~m~~~~~s~~PVvd~-----~~~lvGiVt~rDL~ 142 (496)
T 4fxs_A 91 FEAGVVTHPVTVRPEQTIADVMELTHYHGFAGFPVVTE-----NNELVGIITGRDVR 142 (496)
T ss_dssp CCC--CBCCCCBCSSSBHHHHHHHHTSSCCCEEEEECS-----SSBEEEEEEHHHHT
T ss_pred cccccccCceEECCCCCHHHHHHHHHHcCCcEEEEEcc-----CCEEEEEEEHHHHh
Confidence 45678899999999999999999999999999999997 57899999999996
No 129
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=96.87 E-value=0.0014 Score=67.92 Aligned_cols=53 Identities=21% Similarity=0.295 Sum_probs=48.6
Q ss_pred ccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEe--CcccCCCCcEEEEEeHHHHHH
Q 013262 371 LHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVP--KYEAAGVSPVVGILTRQDLRA 428 (447)
Q Consensus 371 l~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd--~~~~~g~~~lvGIITr~DLl~ 428 (447)
++++|.++++++++++++.++.++|.+.+.+.+||+| + +++++|+||.+|++.
T Consensus 92 ~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~~~-----~~~lvGivt~~Dl~~ 146 (491)
T 1zfj_A 92 SENGVIIDPFFLTPEHKVSEAEELMQRYRISGVPIVETLA-----NRKLVGIITNRDMRF 146 (491)
T ss_dssp HTTTTSSSCCCBCSSSBHHHHHHHHHHTTCSEEEEESCTT-----TCBEEEEEEHHHHHH
T ss_pred HHhcCcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEeCC-----CCEEEEEEEHHHHhh
Confidence 4668889999999999999999999999999999998 5 578999999999985
No 130
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=96.85 E-value=0.00017 Score=74.19 Aligned_cols=58 Identities=21% Similarity=0.332 Sum_probs=0.0
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHH
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 322 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L 322 (447)
+.+++++|++ +++++++..+++++.++|.+++...+||||++ ++|+|+||++|+.+.-
T Consensus 199 ~~~V~evMT~--~lvt~~~~~~leeA~~iL~~~kieklpVVd~~-----------g~LvGlIT~kDi~k~~ 256 (556)
T 4af0_A 199 ETPIKSVMTT--EVVTGSSPITLEKANSLLRETKKGKLPIVDSN-----------GHLVSLVARSDLLKNQ 256 (556)
T ss_dssp -----------------------------------------------------------------------
T ss_pred ceEhhhhccc--ceEEecCCCCHHHHHHHHHHccccceeEEccC-----------CcEEEEEEechhhhhh
Confidence 4679999999 89999999999999999999999999999998 9999999999997643
No 131
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=96.74 E-value=0.00024 Score=73.56 Aligned_cols=58 Identities=29% Similarity=0.382 Sum_probs=0.0
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHH
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLAL 322 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L 322 (447)
+.+++++|++ +++++++++++.++++.|.+++.+.+||||++ ++++|+|+++|+++.+
T Consensus 149 ~~~v~~im~~--~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~-----------g~lvGiiT~~Dil~~~ 206 (486)
T 2cu0_A 149 GKLVKELMTK--EVITVPESIEVEEALKIMIENRIDRLPVVDER-----------GKLVGLITMSDLVARK 206 (486)
T ss_dssp -----------------------------------------------------------------------
T ss_pred CCCHHHHccC--CCeEECCcCcHHHHHHHHHHcCCCEEEEEecC-----------CeEEEEEEHHHHHHhh
Confidence 4678999998 88899999999999999999999999999987 8999999999998754
No 132
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=96.73 E-value=0.00025 Score=73.53 Aligned_cols=54 Identities=30% Similarity=0.350 Sum_probs=1.0
Q ss_pred CccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCCCCcEEEEEeHHHHHH
Q 013262 370 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAGVSPVVGILTRQDLRA 428 (447)
Q Consensus 370 dl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g~~~lvGIITr~DLl~ 428 (447)
.++++|.++++++++++++.++.++|.+.+.+.+||+|+ +++++|+||++|+.+
T Consensus 96 ~~~~iM~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~-----~~~lvGivt~~Dl~~ 149 (494)
T 1vrd_A 96 KTENGIIYDPITVTPDMTVKEAIDLMAEYKIGGLPVVDE-----EGRLVGLLTNRDVRF 149 (494)
T ss_dssp TC---------------------------------------------------------
T ss_pred hHhhcCccCCeEECCCCCHHHHHHHHHHcCceEEEEEcC-----CCEEEEEEEHHHHHh
Confidence 456788899999999999999999999999999999987 568999999999975
No 133
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=96.69 E-value=0.00026 Score=73.30 Aligned_cols=62 Identities=19% Similarity=0.170 Sum_probs=0.4
Q ss_pred cccccccccCCCCeeEecCCCCHHHHHHHHhcCCCCeEEEecCCCCCCCCCCCCCceEEEEEeHHHHHHHHHh
Q 013262 252 TLTVGELIDAKPPVITLSGIEKVSQIVDVLRNTTHNGFPVLDEGVVPPSGLANVATELHGLILRAHLVLALKK 324 (447)
Q Consensus 252 ~l~v~diM~~~~~vv~l~~~~tv~~~~~~L~~~~~~~fPVVd~~~~~~~~~~~~~~~lvGiIt~~dL~~~L~~ 324 (447)
+.+++++|++..+++++++++++.+++++|.+++.+.+||||++ ++++|+|+++|+++....
T Consensus 146 ~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~-----------g~lvGiIT~~Dil~~~~~ 207 (490)
T 4avf_A 146 GDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDEN-----------FYLRGLVTFRDIEKAKTY 207 (490)
T ss_dssp ------------------------------------------------------------------------C
T ss_pred CCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCC-----------CcEEEEEehHHhhhhccC
Confidence 56799999832248899999999999999999999999999987 899999999999886543
No 134
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=96.09 E-value=0.00091 Score=69.70 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=27.9
Q ss_pred CccccccCCCceecCCCCHHHHHHHHHHcCCCEEEEEeCcccCC-CCcEEEEEeHHHHHHH
Q 013262 370 DLHPLTNTTPYTVIESMSVAKAMVLFRQVGLRHLLVVPKYEAAG-VSPVVGILTRQDLRAF 429 (447)
Q Consensus 370 dl~~im~~~p~tV~~~~sL~~a~~lf~~~gl~~LpVVd~~~~~g-~~~lvGIITr~DLl~~ 429 (447)
.+.++|.++|+++++++++.++.++|.+.+.+.+||+|+ +. +++++|+||++|+.+.
T Consensus 109 ~~~~im~~~~~~v~~~~tv~ea~~~m~~~~~~~~pVvd~---~~~~~~lvGiVt~~Dl~~~ 166 (514)
T 1jcn_A 109 NFEQGFITDPVVLSPSHTVGDVLEAKMRHGFSGIPITET---GTMGSKLVGIVTSRDIDFL 166 (514)
T ss_dssp TCCTTSCSSCCCCCC-----------------CEESCC-----------CCEECTTTTC--
T ss_pred hhhhccccCCEEECCCCCHHHHHHHHHhcCCCEEEEEeC---CCcCCEEEEEEEHHHHHhh
Confidence 456788889999999999999999999999999999985 10 3689999999998763
Done!