Query 013264
Match_columns 446
No_of_seqs 399 out of 3477
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 07:18:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013264.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013264hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ii7_A Kelch-like protein 7; p 100.0 2.1E-39 7.1E-44 310.1 30.2 254 132-438 25-289 (306)
2 4asc_A Kelch repeat and BTB do 100.0 1.4E-39 4.7E-44 312.9 28.5 271 132-444 14-300 (315)
3 2xn4_A Kelch-like protein 2; s 100.0 2.7E-39 9.1E-44 308.8 30.1 254 131-438 30-294 (302)
4 1zgk_A Kelch-like ECH-associat 100.0 6E-39 2E-43 307.4 29.1 255 130-438 38-304 (308)
5 2vpj_A Kelch-like protein 12; 100.0 2.6E-38 9E-43 301.7 30.4 253 130-438 30-295 (301)
6 2woz_A Kelch repeat and BTB do 100.0 1.3E-38 4.5E-43 306.4 26.3 263 132-437 25-301 (318)
7 2uvk_A YJHT; unknown function, 100.0 1.4E-34 4.7E-39 282.7 29.5 251 132-429 32-349 (357)
8 4asc_A Kelch repeat and BTB do 100.0 8.1E-35 2.8E-39 279.5 22.6 221 131-387 67-306 (315)
9 1zgk_A Kelch-like ECH-associat 100.0 1.5E-34 5.2E-39 276.8 22.9 231 153-437 13-256 (308)
10 2woz_A Kelch repeat and BTB do 100.0 1.8E-34 6.2E-39 277.5 22.6 218 132-385 79-314 (318)
11 2xn4_A Kelch-like protein 2; s 100.0 1.1E-33 3.8E-38 269.8 25.5 213 131-371 77-299 (302)
12 2uvk_A YJHT; unknown function, 100.0 2E-33 6.9E-38 274.5 25.4 253 145-438 2-311 (357)
13 3ii7_A Kelch-like protein 7; p 100.0 3.5E-33 1.2E-37 266.9 26.2 214 130-371 69-294 (306)
14 2vpj_A Kelch-like protein 12; 100.0 2.5E-32 8.6E-37 260.2 25.8 212 130-371 77-300 (301)
15 2zwa_A Leucine carboxyl methyl 100.0 3.4E-31 1.2E-35 280.0 25.7 242 142-432 378-645 (695)
16 2zwa_A Leucine carboxyl methyl 100.0 6.9E-30 2.4E-34 270.0 22.3 230 130-389 411-676 (695)
17 1k3i_A Galactose oxidase precu 100.0 1.3E-28 4.6E-33 259.5 19.0 263 133-438 168-514 (656)
18 1k3i_A Galactose oxidase precu 100.0 2.3E-27 7.8E-32 250.0 22.6 230 131-389 219-532 (656)
19 1fs1_A SKP2 F-BOX, cyclin A/CD 99.0 1.7E-10 5.8E-15 78.7 2.2 46 13-58 5-50 (53)
20 2ovr_B FBW7, F-BOX/WD repeat p 98.8 3E-07 1E-11 91.3 19.8 48 14-61 16-63 (445)
21 2e31_A FBS1, F-box only protei 98.7 4.4E-09 1.5E-13 97.4 3.6 51 14-64 48-99 (297)
22 3v7d_B Cell division control p 98.6 1.8E-05 6.1E-10 78.6 26.4 46 15-60 13-59 (464)
23 1p22_A F-BOX/WD-repeat protein 98.6 3E-06 1E-10 83.8 19.8 44 16-59 10-57 (435)
24 3mbr_X Glutamine cyclotransfer 97.6 0.019 6.4E-07 51.6 21.4 172 131-335 43-224 (243)
25 3l2o_B F-box only protein 4; s 97.4 7.4E-05 2.5E-09 68.4 3.4 49 16-64 4-52 (312)
26 3mbr_X Glutamine cyclotransfer 97.2 0.075 2.6E-06 47.6 21.2 115 156-297 22-136 (243)
27 2ast_B S-phase kinase-associat 97.1 8.4E-05 2.9E-09 70.6 0.8 43 13-55 5-47 (336)
28 3nol_A Glutamine cyclotransfer 97.1 0.061 2.1E-06 48.7 18.9 172 131-335 65-245 (262)
29 2iwa_A Glutamine cyclotransfer 96.9 0.12 4.2E-06 47.0 19.7 113 158-296 24-137 (266)
30 3dsm_A Uncharacterized protein 96.9 0.076 2.6E-06 49.8 18.9 143 131-299 17-166 (328)
31 2p1m_B Transport inhibitor res 96.5 0.0006 2.1E-08 70.0 1.5 38 13-50 2-40 (594)
32 3dsm_A Uncharacterized protein 96.3 0.45 1.5E-05 44.4 20.2 171 132-334 65-244 (328)
33 2iwa_A Glutamine cyclotransfer 96.2 0.27 9.3E-06 44.7 17.2 174 131-337 44-228 (266)
34 3nol_A Glutamine cyclotransfer 96.2 0.1 3.4E-06 47.3 13.8 114 157-297 45-158 (262)
35 2xbg_A YCF48-like protein; pho 96.0 0.79 2.7E-05 42.8 19.8 173 140-349 108-286 (327)
36 2z2n_A Virginiamycin B lyase; 95.8 0.99 3.4E-05 40.5 19.9 138 132-300 37-176 (299)
37 3nok_A Glutaminyl cyclase; bet 95.8 0.2 6.7E-06 45.4 13.8 134 132-296 76-212 (268)
38 3jrp_A Fusion protein of prote 95.4 0.41 1.4E-05 44.7 15.6 178 132-338 34-232 (379)
39 3hfq_A Uncharacterized protein 95.4 0.4 1.4E-05 44.7 15.4 149 130-301 17-179 (347)
40 1l0q_A Surface layer protein; 95.3 1.5 5.1E-05 41.3 19.3 137 132-300 55-195 (391)
41 3nok_A Glutaminyl cyclase; bet 95.2 0.23 7.8E-06 45.0 12.0 110 158-297 58-167 (268)
42 3q7m_A Lipoprotein YFGL, BAMB; 95.0 2.4 8.2E-05 39.9 21.9 137 132-300 154-304 (376)
43 2qc5_A Streptogramin B lactona 95.0 1.9 6.5E-05 38.6 18.7 140 132-301 42-182 (300)
44 2qc5_A Streptogramin B lactona 95.0 1.9 6.6E-05 38.6 19.7 139 132-301 84-224 (300)
45 1q7f_A NHL, brain tumor CG1071 94.9 2 7E-05 38.4 21.6 144 132-301 101-245 (286)
46 1ri6_A Putative isomerase YBHE 94.9 1.9 6.6E-05 39.4 18.3 144 132-299 16-166 (343)
47 3ogk_B Coronatine-insensitive 94.9 0.0072 2.4E-07 61.9 1.3 34 17-50 13-47 (592)
48 3v9f_A Two-component system se 94.8 4.2 0.00014 42.7 22.8 142 132-301 384-531 (781)
49 3bws_A Protein LP49; two-domai 94.7 0.8 2.7E-05 43.9 15.6 141 132-299 102-248 (433)
50 3q7m_A Lipoprotein YFGL, BAMB; 94.6 1.5 5E-05 41.4 17.2 109 164-301 52-171 (376)
51 3jrp_A Fusion protein of prote 94.6 0.71 2.4E-05 43.0 14.7 141 132-296 80-242 (379)
52 1p22_A F-BOX/WD-repeat protein 94.3 0.83 2.8E-05 44.2 14.8 105 163-296 140-244 (435)
53 3jro_A Fusion protein of prote 94.3 2.2 7.4E-05 44.8 18.9 178 132-338 32-230 (753)
54 3fm0_A Protein CIAO1; WDR39,SG 94.2 0.67 2.3E-05 43.4 13.6 175 132-337 39-216 (345)
55 3dwl_C Actin-related protein 2 94.1 0.63 2.1E-05 43.7 13.1 141 132-296 34-179 (377)
56 3vgz_A Uncharacterized protein 94.0 3.6 0.00012 37.8 23.4 138 132-298 70-219 (353)
57 2z2n_A Virginiamycin B lyase; 93.8 3.5 0.00012 36.8 22.3 117 158-301 18-135 (299)
58 1l0q_A Surface layer protein; 93.8 0.72 2.5E-05 43.6 13.0 137 132-300 13-153 (391)
59 2hqs_A Protein TOLB; TOLB, PAL 93.7 2.9 0.0001 40.2 17.4 146 132-301 204-351 (415)
60 1k8k_C P40, ARP2/3 complex 41 93.7 0.71 2.4E-05 43.0 12.7 114 160-296 14-129 (372)
61 1k8k_C P40, ARP2/3 complex 41 93.2 1.4 4.9E-05 40.9 13.9 138 132-293 31-172 (372)
62 3v9f_A Two-component system se 93.2 8.3 0.00028 40.5 21.1 166 132-333 428-600 (781)
63 1gxr_A ESG1, transducin-like e 93.1 3.3 0.00011 37.6 16.0 136 132-298 164-300 (337)
64 2hqs_A Protein TOLB; TOLB, PAL 93.1 6.5 0.00022 37.7 21.4 146 131-301 159-307 (415)
65 1gxr_A ESG1, transducin-like e 92.9 2.5 8.6E-05 38.4 14.9 139 132-299 120-260 (337)
66 3v7d_B Cell division control p 92.7 7.3 0.00025 37.5 18.7 136 132-299 291-426 (464)
67 4a2l_A BT_4663, two-component 92.7 11 0.00039 39.5 25.1 140 132-301 151-298 (795)
68 1rwi_B Serine/threonine-protei 92.7 4.9 0.00017 35.3 17.9 139 131-299 46-185 (270)
69 2dg1_A DRP35, lactonase; beta 92.7 1.4 4.8E-05 40.6 12.8 144 132-294 67-213 (333)
70 3fm0_A Protein CIAO1; WDR39,SG 92.6 2.9 9.8E-05 38.9 15.0 112 161-295 23-137 (345)
71 3jro_A Fusion protein of prote 92.6 0.96 3.3E-05 47.6 12.7 108 165-295 20-133 (753)
72 4ery_A WD repeat-containing pr 92.4 6 0.0002 35.7 19.9 137 132-298 46-184 (312)
73 1rwi_B Serine/threonine-protei 92.2 5.7 0.00019 34.9 18.2 166 132-336 88-254 (270)
74 2ovr_B FBW7, F-BOX/WD repeat p 92.1 3.8 0.00013 39.4 15.7 143 165-338 288-430 (445)
75 3bws_A Protein LP49; two-domai 91.8 8.9 0.00031 36.3 21.1 142 132-298 192-338 (433)
76 3dwl_C Actin-related protein 2 91.6 0.28 9.5E-06 46.3 6.5 145 164-338 21-169 (377)
77 3vl1_A 26S proteasome regulato 91.6 9.2 0.00031 36.0 19.8 95 132-246 120-215 (420)
78 4e54_B DNA damage-binding prot 91.5 5.5 0.00019 38.3 16.0 138 132-296 143-284 (435)
79 3mkq_A Coatomer beta'-subunit; 91.3 6 0.00021 41.3 17.3 135 132-296 36-174 (814)
80 4a2l_A BT_4663, two-component 91.2 17 0.00057 38.2 25.2 141 132-301 108-251 (795)
81 4aez_A CDC20, WD repeat-contai 90.9 4.1 0.00014 38.6 14.2 112 165-301 228-343 (401)
82 3g4e_A Regucalcin; six bladed 90.8 9.1 0.00031 34.5 16.2 179 132-338 74-265 (297)
83 4ery_A WD repeat-containing pr 90.7 9.1 0.00031 34.5 17.6 137 132-297 88-226 (312)
84 4e54_B DNA damage-binding prot 90.7 5.9 0.0002 38.1 15.3 108 165-295 131-241 (435)
85 3ow8_A WD repeat-containing pr 90.7 9.8 0.00034 34.8 19.5 167 132-338 103-271 (321)
86 2aq5_A Coronin-1A; WD40 repeat 90.6 8.2 0.00028 36.4 16.1 109 167-296 145-256 (402)
87 2ojh_A Uncharacterized protein 90.5 5.3 0.00018 35.1 13.9 146 130-301 21-169 (297)
88 1got_B GT-beta; complex (GTP-b 90.3 10 0.00034 35.0 16.0 168 132-338 78-249 (340)
89 4aez_A CDC20, WD repeat-contai 90.1 5.8 0.0002 37.6 14.5 135 132-297 114-251 (401)
90 3ow8_A WD repeat-containing pr 90.0 11 0.00039 34.4 16.9 111 160-297 170-282 (321)
91 1q7f_A NHL, brain tumor CG1071 89.9 10 0.00035 33.7 20.8 172 132-336 52-227 (286)
92 4gga_A P55CDC, cell division c 89.7 12 0.00043 35.5 16.7 136 132-295 126-262 (420)
93 2hes_X YDR267CP; beta-propelle 89.6 4.1 0.00014 37.5 12.7 115 164-301 163-287 (330)
94 1pjx_A Dfpase, DIISOPROPYLFLUO 89.4 11 0.00039 33.7 15.6 142 132-297 47-211 (314)
95 2hes_X YDR267CP; beta-propelle 89.3 9.9 0.00034 34.8 15.1 110 164-294 117-230 (330)
96 1jmx_B Amine dehydrogenase; ox 89.3 2.8 9.5E-05 38.4 11.2 118 164-296 9-136 (349)
97 2aq5_A Coronin-1A; WD40 repeat 89.1 15 0.00051 34.5 21.4 111 165-298 93-211 (402)
98 2pm9_A Protein WEB1, protein t 89.1 15 0.0005 34.4 16.6 111 166-297 178-297 (416)
99 4gqb_B Methylosome protein 50; 88.9 15 0.0005 34.1 16.0 142 166-346 182-328 (344)
100 3azo_A Aminopeptidase; POP fam 88.8 21 0.00073 36.1 18.6 153 131-301 161-332 (662)
101 2pm9_A Protein WEB1, protein t 88.7 15 0.00051 34.4 16.3 143 132-299 46-202 (416)
102 2pm7_B Protein transport prote 88.7 9.3 0.00032 34.4 14.2 64 166-244 67-133 (297)
103 3ott_A Two-component system se 88.5 17 0.00057 38.0 17.7 110 163-301 480-593 (758)
104 1ri6_A Putative isomerase YBHE 88.5 12 0.00042 33.7 15.1 149 132-302 152-318 (343)
105 2xbg_A YCF48-like protein; pho 88.4 15 0.00052 33.8 22.3 169 140-349 24-200 (327)
106 4g56_B MGC81050 protein; prote 88.2 3 0.0001 39.1 10.7 113 159-296 144-260 (357)
107 2z3z_A Dipeptidyl aminopeptida 88.2 18 0.00061 37.0 17.6 156 130-301 234-398 (706)
108 2ad6_A Methanol dehydrogenase 88.0 7.8 0.00027 39.2 14.3 119 164-300 61-193 (571)
109 4g56_B MGC81050 protein; prote 87.9 5.9 0.0002 37.0 12.6 174 132-346 162-340 (357)
110 3vgz_A Uncharacterized protein 87.9 16 0.00053 33.3 22.0 145 132-300 112-268 (353)
111 1yiq_A Quinohemoprotein alcoho 87.4 8.3 0.00028 40.0 14.3 118 164-300 69-200 (689)
112 1kv9_A Type II quinohemoprotei 87.3 9 0.00031 39.6 14.5 118 164-300 65-195 (668)
113 4gqb_B Methylosome protein 50; 87.2 4.3 0.00015 37.9 11.1 113 159-296 132-248 (344)
114 1sq9_A Antiviral protein SKI8; 87.1 19 0.00065 33.4 16.9 74 211-296 191-269 (397)
115 2dg1_A DRP35, lactonase; beta 87.1 10 0.00035 34.5 13.6 129 158-301 48-178 (333)
116 3u4y_A Uncharacterized protein 87.0 15 0.00051 33.2 14.7 111 164-300 8-123 (331)
117 3no2_A Uncharacterized protein 87.0 17 0.00057 32.6 15.2 164 131-333 56-230 (276)
118 1got_B GT-beta; complex (GTP-b 86.8 19 0.00064 33.0 16.0 137 132-296 165-303 (340)
119 3hfq_A Uncharacterized protein 86.8 7.1 0.00024 35.9 12.3 103 184-300 19-124 (347)
120 3bg1_A Protein SEC13 homolog; 86.6 5.5 0.00019 36.4 11.3 102 132-249 36-143 (316)
121 3azo_A Aminopeptidase; POP fam 86.5 18 0.00063 36.6 16.4 147 132-301 218-376 (662)
122 2ojh_A Uncharacterized protein 86.4 16 0.00055 31.9 16.3 147 132-301 63-213 (297)
123 3ei3_B DNA damage-binding prot 86.1 21 0.00073 33.0 16.8 136 132-294 97-236 (383)
124 1r5m_A SIR4-interacting protei 85.8 12 0.0004 35.0 13.6 134 132-296 228-363 (425)
125 1kb0_A Quinohemoprotein alcoho 85.0 12 0.00039 38.8 13.9 119 164-301 76-208 (677)
126 1qhu_A Protein (hemopexin); be 84.9 30 0.001 33.7 17.0 57 165-244 158-216 (460)
127 3g4e_A Regucalcin; six bladed 84.9 21 0.00073 32.0 16.8 137 132-297 36-185 (297)
128 3mkq_A Coatomer beta'-subunit; 84.7 29 0.00099 36.0 17.2 136 132-297 78-220 (814)
129 3bg1_A Protein SEC13 homolog; 84.5 3.9 0.00013 37.4 9.2 114 164-300 23-143 (316)
130 4gga_A P55CDC, cell division c 84.4 28 0.00096 32.9 18.4 95 184-297 126-221 (420)
131 3fvz_A Peptidyl-glycine alpha- 84.0 25 0.00086 32.0 22.3 157 159-337 147-313 (329)
132 3ei3_B DNA damage-binding prot 83.5 28 0.00095 32.2 16.8 111 167-300 87-200 (383)
133 4aow_A Guanine nucleotide-bind 83.4 7.6 0.00026 35.2 10.7 136 132-296 196-339 (340)
134 1vyh_C Platelet-activating fac 83.4 29 0.00098 32.9 15.2 137 132-298 131-269 (410)
135 2p4o_A Hypothetical protein; p 83.4 25 0.00087 31.7 17.6 137 132-294 54-198 (306)
136 2p4o_A Hypothetical protein; p 83.3 26 0.00088 31.6 17.9 114 157-295 34-148 (306)
137 1erj_A Transcriptional repress 83.1 15 0.00051 34.6 13.0 112 160-298 129-242 (393)
138 3zwl_B Eukaryotic translation 82.9 27 0.00093 31.6 18.7 98 132-244 55-152 (369)
139 2pbi_B Guanine nucleotide-bind 82.2 31 0.0011 31.8 17.6 107 165-296 209-317 (354)
140 3c5m_A Oligogalacturonate lyas 81.7 16 0.00056 33.8 12.6 154 131-301 216-391 (396)
141 2p9w_A MAL S 1 allergenic prot 81.3 34 0.0012 31.7 23.0 236 131-390 35-307 (334)
142 3u4y_A Uncharacterized protein 81.2 16 0.00056 32.9 12.1 135 131-295 20-161 (331)
143 3sfz_A APAF-1, apoptotic pepti 81.2 23 0.00079 39.1 15.3 112 159-297 966-1077(1249)
144 1nir_A Nitrite reductase; hemo 80.9 30 0.001 34.5 14.8 105 164-297 147-260 (543)
145 3f3f_A Nucleoporin SEH1; struc 80.9 16 0.00054 32.7 11.9 112 164-296 21-145 (351)
146 1pby_B Quinohemoprotein amine 80.7 20 0.00068 32.2 12.5 142 132-298 12-167 (337)
147 3odt_A Protein DOA1; ubiquitin 80.6 20 0.00069 31.7 12.4 113 159-301 189-303 (313)
148 3i2n_A WD repeat-containing pr 80.5 33 0.0011 31.0 18.6 139 132-297 45-202 (357)
149 4aow_A Guanine nucleotide-bind 80.3 32 0.0011 30.8 17.7 63 218-296 185-248 (340)
150 2pm7_B Protein transport prote 80.3 9 0.00031 34.5 9.8 113 160-295 15-133 (297)
151 1w6s_A Methanol dehydrogenase 79.7 17 0.00059 36.9 12.5 120 164-301 61-200 (599)
152 1pgu_A Actin interacting prote 79.6 35 0.0012 33.7 14.9 133 132-294 468-614 (615)
153 2fp8_A Strictosidine synthase; 79.5 33 0.0011 31.1 13.6 140 131-295 165-314 (322)
154 4ggc_A P55CDC, cell division c 79.5 33 0.0011 30.4 18.4 138 132-296 46-183 (318)
155 2ghs_A AGR_C_1268P; regucalcin 79.5 37 0.0013 30.9 14.4 133 132-293 72-209 (326)
156 3fvz_A Peptidyl-glycine alpha- 79.2 37 0.0013 30.8 26.3 145 132-300 70-233 (329)
157 1jmx_B Amine dehydrogenase; ox 78.9 8.3 0.00029 35.1 9.3 145 131-298 21-179 (349)
158 3vl1_A 26S proteasome regulato 78.8 42 0.0014 31.2 20.6 109 163-297 106-215 (420)
159 1vyh_C Platelet-activating fac 78.6 20 0.00068 34.0 12.1 107 164-297 118-226 (410)
160 3lrv_A PRE-mRNA-splicing facto 78.3 39 0.0013 30.8 13.8 106 165-296 138-246 (343)
161 2pbi_B Guanine nucleotide-bind 78.2 42 0.0014 30.9 15.0 94 184-297 177-274 (354)
162 4d9s_A UVB-resistance protein 77.4 50 0.0017 31.4 17.6 18 208-225 182-199 (406)
163 3iz6_a 40S ribosomal protein R 77.2 46 0.0016 30.9 18.7 142 132-298 181-333 (380)
164 3c5m_A Oligogalacturonate lyas 77.2 28 0.00097 32.1 12.7 157 130-301 167-336 (396)
165 3f3f_A Nucleoporin SEH1; struc 77.1 39 0.0013 30.0 14.8 64 218-295 182-250 (351)
166 1r5m_A SIR4-interacting protei 76.8 32 0.0011 31.9 13.0 113 159-296 113-238 (425)
167 1nir_A Nitrite reductase; hemo 76.5 63 0.0022 32.0 19.0 135 132-296 160-313 (543)
168 1sq9_A Antiviral protein SKI8; 75.5 35 0.0012 31.5 12.8 118 159-297 191-325 (397)
169 2vdu_B TRNA (guanine-N(7)-)-me 74.9 59 0.002 30.9 15.8 66 234-300 330-399 (450)
170 3scy_A Hypothetical bacterial 74.7 20 0.00069 32.9 10.8 98 184-295 30-130 (361)
171 2vdu_B TRNA (guanine-N(7)-)-me 74.7 60 0.002 30.9 21.6 114 160-297 155-274 (450)
172 3ju4_A Endo-N-acetylneuraminid 74.4 62 0.0021 30.9 18.8 192 137-338 266-484 (670)
173 3zwl_B Eukaryotic translation 74.0 22 0.00076 32.2 10.8 140 132-296 198-348 (369)
174 3kci_A Probable E3 ubiquitin-p 73.0 43 0.0015 31.6 12.7 18 208-225 168-185 (389)
175 3mmy_A MRNA export factor; mRN 72.8 25 0.00086 31.8 10.9 105 166-296 54-162 (368)
176 2ynn_A Coatomer subunit beta'; 72.8 44 0.0015 29.8 12.4 105 164-295 23-129 (304)
177 2ynn_A Coatomer subunit beta'; 72.8 52 0.0018 29.3 15.5 167 132-338 78-251 (304)
178 3e5z_A Putative gluconolactona 72.4 51 0.0017 29.1 16.6 147 132-301 91-253 (296)
179 3hrp_A Uncharacterized protein 71.8 69 0.0024 30.4 16.3 117 158-300 134-255 (409)
180 1itv_A MMP9; adaptive molecula 71.8 45 0.0015 28.2 11.7 107 157-296 55-176 (195)
181 1erj_A Transcriptional repress 71.7 65 0.0022 30.0 14.7 97 216-338 133-230 (393)
182 3e5z_A Putative gluconolactona 71.6 54 0.0018 29.0 16.2 139 132-297 51-206 (296)
183 1nr0_A Actin interacting prote 70.9 89 0.0031 31.2 18.3 116 158-296 194-315 (611)
184 3gre_A Serine/threonine-protei 70.7 51 0.0018 31.0 12.9 141 132-296 193-361 (437)
185 3dr2_A Exported gluconolactona 70.6 59 0.002 29.0 13.1 143 132-296 68-226 (305)
186 3lp9_A LS-24; SEED albumin, pl 70.5 23 0.00078 30.9 9.3 61 217-295 129-202 (227)
187 3c7x_A Matrix metalloproteinas 70.3 49 0.0017 28.0 12.2 111 154-296 50-177 (196)
188 3oyo_A Hemopexin fold protein 70.3 30 0.001 30.1 10.0 64 217-298 70-149 (225)
189 3no2_A Uncharacterized protein 69.9 59 0.002 28.8 16.8 164 132-337 16-186 (276)
190 1npe_A Nidogen, entactin; glyc 69.7 56 0.0019 28.4 19.1 138 132-296 59-200 (267)
191 3ott_A Two-component system se 69.6 81 0.0028 32.6 15.0 128 132-294 494-626 (758)
192 4a11_B DNA excision repair pro 69.5 33 0.0011 31.6 11.0 106 165-296 55-177 (408)
193 3i2n_A WD repeat-containing pr 69.5 40 0.0014 30.3 11.5 108 166-296 31-150 (357)
194 1pby_B Quinohemoprotein amine 69.2 62 0.0021 28.7 13.2 108 183-299 11-129 (337)
195 2fp8_A Strictosidine synthase; 69.0 66 0.0022 29.0 15.4 142 131-294 40-216 (322)
196 3scy_A Hypothetical bacterial 68.9 69 0.0023 29.2 20.4 100 130-244 28-130 (361)
197 1flg_A Protein (quinoprotein e 68.9 49 0.0017 33.3 12.7 117 164-299 67-200 (582)
198 2ecf_A Dipeptidyl peptidase IV 68.2 93 0.0032 31.7 15.1 105 184-301 264-375 (741)
199 1pjx_A Dfpase, DIISOPROPYLFLUO 67.9 64 0.0022 28.4 15.9 131 159-300 22-167 (314)
200 4d9s_A UVB-resistance protein 67.4 86 0.0029 29.7 16.4 18 157-174 26-43 (406)
201 1pex_A Collagenase-3, MMP-13; 67.1 60 0.002 27.7 17.0 103 163-296 31-147 (207)
202 3sfz_A APAF-1, apoptotic pepti 65.8 64 0.0022 35.5 13.9 113 159-298 620-736 (1249)
203 3k26_A Polycomb protein EED; W 65.6 27 0.00093 31.6 9.4 106 166-296 85-194 (366)
204 3k26_A Polycomb protein EED; W 65.3 77 0.0026 28.4 14.2 98 218-338 85-184 (366)
205 3sjl_D Methylamine dehydrogena 65.2 47 0.0016 31.5 11.0 70 218-298 292-367 (386)
206 1kv9_A Type II quinohemoprotei 65.2 49 0.0017 33.9 12.0 72 213-301 63-145 (668)
207 3odt_A Protein DOA1; ubiquitin 64.8 72 0.0025 27.9 14.6 131 132-293 40-173 (313)
208 1itv_A MMP9; adaptive molecula 64.4 64 0.0022 27.2 14.5 134 163-336 14-166 (195)
209 1npe_A Nidogen, entactin; glyc 64.2 72 0.0025 27.7 17.2 114 159-298 126-242 (267)
210 3mmy_A MRNA export factor; mRN 63.6 83 0.0028 28.2 16.8 104 164-296 96-201 (368)
211 2z3z_A Dipeptidyl aminopeptida 63.1 1.3E+02 0.0045 30.4 20.5 111 182-301 234-351 (706)
212 3pe7_A Oligogalacturonate lyas 61.7 63 0.0022 29.6 11.3 149 132-297 217-387 (388)
213 1kb0_A Quinohemoprotein alcoho 61.2 58 0.002 33.4 11.7 71 213-300 74-155 (677)
214 1yiq_A Quinohemoprotein alcoho 61.1 70 0.0024 32.9 12.3 72 213-301 67-149 (689)
215 1yfq_A Cell cycle arrest prote 60.3 93 0.0032 27.6 12.7 105 164-294 21-131 (342)
216 2ad6_A Methanol dehydrogenase 60.1 76 0.0026 31.8 12.1 72 213-300 59-142 (571)
217 3tc9_A Hypothetical hydrolase; 59.0 93 0.0032 29.7 12.1 109 165-300 149-263 (430)
218 3iuj_A Prolyl endopeptidase; h 58.9 1.6E+02 0.0055 30.0 14.6 119 163-302 289-413 (693)
219 3mvd_K Regulator of chromosome 58.3 1.3E+02 0.0043 28.5 15.4 18 208-225 188-205 (423)
220 3gre_A Serine/threonine-protei 57.4 1.2E+02 0.0042 28.2 15.5 108 165-296 181-294 (437)
221 2bkl_A Prolyl endopeptidase; m 56.7 1.6E+02 0.0053 30.0 14.1 124 159-300 231-357 (695)
222 2bkl_A Prolyl endopeptidase; m 56.3 1.8E+02 0.006 29.6 14.4 120 164-301 280-404 (695)
223 1pex_A Collagenase-3, MMP-13; 56.2 94 0.0032 26.5 15.2 112 154-297 67-195 (207)
224 1pgu_A Actin interacting prote 56.2 1.5E+02 0.0052 28.9 16.8 104 166-295 456-573 (615)
225 2kwv_A RAD30 homolog B, DNA po 55.7 5.3 0.00018 24.9 1.5 24 11-34 15-38 (48)
226 3lrv_A PRE-mRNA-splicing facto 55.4 1.2E+02 0.004 27.3 16.2 95 132-245 150-246 (343)
227 2hz6_A Endoplasmic reticulum t 55.1 4.8 0.00016 38.1 2.0 107 164-299 8-118 (369)
228 3dr2_A Exported gluconolactona 55.1 1.1E+02 0.0039 27.0 14.7 151 132-301 108-274 (305)
229 2xyi_A Probable histone-bindin 53.8 58 0.002 30.8 9.7 107 166-295 141-264 (430)
230 3iz6_a 40S ribosomal protein R 53.8 1.4E+02 0.0046 27.5 13.0 114 159-295 254-376 (380)
231 1hxn_A Hemopexin, HPX; heme, b 53.7 1.1E+02 0.0037 26.4 12.9 97 164-294 27-144 (219)
232 1su3_A Interstitial collagenas 53.6 1.3E+02 0.0043 29.2 11.9 135 162-336 269-424 (450)
233 1qks_A Cytochrome CD1 nitrite 53.3 50 0.0017 33.2 9.3 105 165-296 166-277 (567)
234 2mad_H Methylamine dehydrogena 52.5 41 0.0014 31.6 8.2 75 164-247 277-354 (373)
235 1n7d_A LDL receptor, low-densi 52.1 1.2E+02 0.0041 31.2 12.2 139 132-298 476-618 (699)
236 1ijq_A LDL receptor, low-densi 51.4 1.4E+02 0.0047 26.9 18.5 115 159-296 124-240 (316)
237 3b7f_A Glycosyl hydrolase, BNR 51.0 1.5E+02 0.0052 27.5 12.0 103 185-301 33-154 (394)
238 3pe7_A Oligogalacturonate lyas 50.5 1.5E+02 0.005 27.0 14.4 159 130-301 167-336 (388)
239 3qhy_B Beta-lactamase inhibito 50.4 91 0.0031 27.9 9.8 17 260-276 152-168 (282)
240 2ghs_A AGR_C_1268P; regucalcin 50.3 1.4E+02 0.0049 26.8 12.5 112 165-300 60-174 (326)
241 3dm0_A Maltose-binding peripla 50.2 2.2E+02 0.0074 28.8 14.7 145 159-338 435-584 (694)
242 3sjl_D Methylamine dehydrogena 49.5 30 0.001 32.9 6.5 74 164-247 290-367 (386)
243 4h5i_A Guanine nucleotide-exch 49.4 1.6E+02 0.0054 27.0 12.8 153 160-338 139-292 (365)
244 1yr2_A Prolyl oligopeptidase; 48.7 2.4E+02 0.0081 28.9 14.6 146 132-301 295-448 (741)
245 1yr2_A Prolyl oligopeptidase; 48.3 2.4E+02 0.0083 28.8 18.0 126 159-301 272-402 (741)
246 3tc9_A Hypothetical hydrolase; 47.9 1.5E+02 0.0052 28.2 11.6 135 131-293 159-300 (430)
247 4a11_B DNA excision repair pro 45.2 1.8E+02 0.006 26.4 14.9 24 217-246 256-279 (408)
248 2xyi_A Probable histone-bindin 44.6 83 0.0028 29.7 9.1 64 218-295 244-310 (430)
249 3lp9_A LS-24; SEED albumin, pl 44.5 42 0.0014 29.2 6.3 20 266-295 129-148 (227)
250 3oyo_A Hemopexin fold protein 44.0 1.6E+02 0.0054 25.4 14.4 60 217-294 127-198 (225)
251 1yfq_A Cell cycle arrest prote 43.8 1.7E+02 0.0058 25.8 16.0 133 132-294 34-179 (342)
252 3o4h_A Acylamino-acid-releasin 43.8 1E+02 0.0035 30.4 10.0 133 134-292 135-274 (582)
253 3iuj_A Prolyl endopeptidase; h 43.7 2.8E+02 0.0094 28.2 14.6 104 182-301 258-366 (693)
254 2gop_A Trilobed protease; beta 43.7 1.8E+02 0.006 25.9 15.1 103 182-301 151-258 (347)
255 3of7_A Regulator of chromosome 43.3 2.3E+02 0.008 27.2 13.7 19 208-226 213-231 (473)
256 3ju4_A Endo-N-acetylneuraminid 42.8 2.3E+02 0.0079 27.1 17.0 133 193-337 268-408 (670)
257 1n7d_A LDL receptor, low-densi 42.7 1.4E+02 0.0047 30.8 10.9 135 164-336 463-604 (699)
258 2mad_H Methylamine dehydrogena 42.3 2.1E+02 0.0073 26.5 12.5 70 218-298 279-354 (373)
259 1flg_A Protein (quinoprotein e 42.0 1.3E+02 0.0044 30.2 10.3 71 213-300 65-144 (582)
260 3ba0_A Macrophage metalloelast 41.9 2.2E+02 0.0075 26.5 15.2 117 153-299 223-355 (365)
261 3sre_A PON1, serum paraoxonase 41.8 2.2E+02 0.0074 26.5 11.9 130 131-274 141-285 (355)
262 4ggc_A P55CDC, cell division c 41.7 1.7E+02 0.006 25.3 13.4 56 184-247 46-102 (318)
263 1gen_A Gelatinase A; hydrolase 41.1 1.7E+02 0.0058 25.0 17.3 137 158-336 34-194 (218)
264 3dm0_A Maltose-binding peripla 40.8 3E+02 0.01 27.7 15.9 103 167-297 532-635 (694)
265 2ymu_A WD-40 repeat protein; u 40.3 2.6E+02 0.009 27.0 15.9 108 164-299 436-544 (577)
266 3kci_A Probable E3 ubiquitin-p 40.2 1.7E+02 0.0059 27.3 10.5 18 209-226 223-240 (389)
267 3frx_A Guanine nucleotide-bind 40.0 2E+02 0.0068 25.5 12.9 134 132-296 88-229 (319)
268 3hxj_A Pyrrolo-quinoline quino 39.8 1.5E+02 0.0053 26.0 9.8 91 185-300 80-173 (330)
269 2ymu_A WD-40 repeat protein; u 39.5 2.7E+02 0.0092 26.9 17.3 107 161-295 392-499 (577)
270 3vu4_A KMHSV2; beta-propeller 39.5 2.2E+02 0.0074 25.8 12.7 69 159-244 200-272 (355)
271 2p9w_A MAL S 1 allergenic prot 39.0 2.4E+02 0.0081 26.1 14.2 73 157-244 139-216 (334)
272 1k32_A Tricorn protease; prote 38.4 4E+02 0.014 28.5 16.6 107 183-301 358-468 (1045)
273 2ecf_A Dipeptidyl peptidase IV 37.6 3.4E+02 0.011 27.4 15.8 109 132-251 264-376 (741)
274 1w6s_A Methanol dehydrogenase 37.0 1.9E+02 0.0063 29.2 10.6 72 213-300 59-148 (599)
275 3c75_H MADH, methylamine dehyd 36.8 94 0.0032 29.9 8.0 119 164-297 83-212 (426)
276 3v65_B Low-density lipoprotein 36.6 2.6E+02 0.009 25.9 19.6 160 132-334 139-306 (386)
277 2hz6_A Endoplasmic reticulum t 35.5 46 0.0016 31.1 5.5 65 215-299 7-75 (369)
278 2xdw_A Prolyl endopeptidase; a 35.4 3.7E+02 0.013 27.2 19.3 156 132-301 152-330 (710)
279 2oiz_A Aromatic amine dehydrog 34.8 1.3E+02 0.0044 27.7 8.5 68 164-244 264-335 (361)
280 1qks_A Cytochrome CD1 nitrite 34.7 3.5E+02 0.012 26.8 20.1 95 131-245 177-277 (567)
281 3o4h_A Acylamino-acid-releasin 34.5 96 0.0033 30.6 8.0 98 185-299 134-232 (582)
282 2xzm_R RACK1; ribosome, transl 34.3 2.5E+02 0.0087 25.0 15.0 65 164-245 86-151 (343)
283 3frx_A Guanine nucleotide-bind 34.2 2.5E+02 0.0084 24.9 14.6 110 160-297 71-188 (319)
284 2xdw_A Prolyl endopeptidase; a 33.7 3.9E+02 0.013 27.0 21.1 127 159-301 237-376 (710)
285 1ck7_A Protein (gelatinase A); 31.3 2.3E+02 0.0079 28.7 10.0 104 161-295 449-567 (631)
286 1qhu_A Protein (hemopexin); be 31.1 3.7E+02 0.013 26.0 15.0 57 217-295 158-216 (460)
287 3hxj_A Pyrrolo-quinoline quino 30.9 2.7E+02 0.0092 24.3 12.1 128 132-299 118-250 (330)
288 4h5i_A Guanine nucleotide-exch 30.9 3.1E+02 0.01 24.9 17.7 173 132-337 158-334 (365)
289 3m0c_C LDL receptor, low-densi 30.7 4.8E+02 0.016 27.2 18.4 107 164-295 524-633 (791)
290 3c75_H MADH, methylamine dehyd 30.6 78 0.0027 30.4 6.2 74 164-247 329-406 (426)
291 4hw6_A Hypothetical protein, I 30.1 3.6E+02 0.012 25.5 12.1 105 166-297 153-262 (433)
292 1jof_A Carboxy-CIS,CIS-muconat 29.4 3.2E+02 0.011 24.7 16.2 72 216-298 264-345 (365)
293 1su3_A Interstitial collagenas 28.9 4E+02 0.014 25.6 12.4 113 153-298 305-436 (450)
294 3v64_C Agrin; beta propeller, 26.4 3.7E+02 0.013 24.4 20.7 140 159-336 120-265 (349)
295 3c7x_A Matrix metalloproteinas 26.0 2.9E+02 0.0098 23.1 13.8 134 163-336 13-167 (196)
296 2gop_A Trilobed protease; beta 25.9 3.4E+02 0.012 23.9 12.8 149 130-301 42-214 (347)
297 2cn3_A Xyloglucanase, beta-1,4 25.8 2.9E+02 0.01 28.4 10.1 88 243-335 231-322 (737)
298 3qhy_B Beta-lactamase inhibito 25.8 3.5E+02 0.012 23.9 10.9 16 260-275 74-89 (282)
299 3p5b_L Low density lipoprotein 25.0 4.2E+02 0.014 24.6 17.6 107 164-295 212-321 (400)
300 1hxn_A Hemopexin, HPX; heme, b 25.0 2.2E+02 0.0075 24.4 7.5 57 261-335 22-81 (219)
301 1nr0_A Actin interacting prote 24.1 5.2E+02 0.018 25.4 16.9 111 164-300 249-361 (611)
302 1mda_H Methylamine dehydrogena 23.6 1.8E+02 0.0062 27.1 7.3 89 164-264 274-364 (368)
303 2qe8_A Uncharacterized protein 23.4 3.5E+02 0.012 24.2 9.3 129 159-301 21-162 (343)
304 1ijq_A LDL receptor, low-densi 22.9 4E+02 0.014 23.6 21.8 141 158-334 80-226 (316)
305 2oiz_A Aromatic amine dehydrog 22.7 4.3E+02 0.015 24.0 9.8 70 218-301 266-341 (361)
306 3ba0_A Macrophage metalloelast 21.5 4.9E+02 0.017 24.1 14.6 135 163-335 188-341 (365)
307 3hrp_A Uncharacterized protein 21.2 5E+02 0.017 24.1 20.7 120 158-301 222-361 (409)
308 2b4w_A Hypothetical protein, c 20.8 3.3E+02 0.011 24.5 7.6 59 214-275 38-98 (315)
No 1
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=2.1e-39 Score=310.15 Aligned_cols=254 Identities=19% Similarity=0.295 Sum_probs=211.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+++||+.+++|..++++| .+|..|++++ .+++|||+||.. ....+++++||+ .+++|+++++||.+|..|+
T Consensus 25 ~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~---~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~~ 96 (306)
T 3ii7_A 25 SCRYFNPKDYSWTDIRCPF--EKRRDAACVF-WDNVVYILGGSQ---LFPIKRMDCYNV--VKDSWYSKLGPPTPRDSLA 96 (306)
T ss_dssp SEEEEETTTTEEEECCCCS--CCCBSCEEEE-ETTEEEEECCBS---SSBCCEEEEEET--TTTEEEEEECCSSCCBSCE
T ss_pred eEEEecCCCCCEecCCCCC--cccceeEEEE-ECCEEEEEeCCC---CCCcceEEEEeC--CCCeEEECCCCCcccccee
Confidence 4889999999999999999 6888888776 799999999987 336889999999 8999999999999999999
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCC-CcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQ-GRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~v~~y 290 (446)
+++++ ++|||+||.+.....++++++||+.+++|+.++++|.+|.. +++++.+++||++||...... +...+++++|
T Consensus 97 ~~~~~-~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~y 174 (306)
T 3ii7_A 97 ACAAE-GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCS-HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVY 174 (306)
T ss_dssp EEEET-TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEESCTTTCEECCCEEEE
T ss_pred EEEEC-CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcce-eEEEEECCEEEEECCCCCCCCcccccceEEEe
Confidence 99998 89999999874445689999999999999999999999987 788889999999999865431 1237899999
Q ss_pred eCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCcCCCC
Q 013264 291 DPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKSVTEG 361 (446)
Q Consensus 291 d~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~~~~~ 361 (446)
|+++++|+.++ ++|.+|..|+++++++ +|||+||.+.. ++++++|+.+. ++| .+
T Consensus 175 d~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p----~~ 237 (306)
T 3ii7_A 175 DPATETWTELC-----PMIEARKNHGLVFVKD-----KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVS---PMP----WK 237 (306)
T ss_dssp ETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEECCEETTEEBCCEEEEETTTTEEEECC---CCS----CC
T ss_pred CCCCCeEEECC-----CccchhhcceEEEECC-----EEEEEeCCCCCCCCceEEEeeCCCCcEEECC---CCC----CC
Confidence 99999999998 6889999999999987 99999998654 34556677664 443 46
Q ss_pred CCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeee-cCCCCccccc
Q 013264 362 SSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHV-HLPVGFSGFP 438 (446)
Q Consensus 362 R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~-~~p~~~~~~~ 438 (446)
|..+++++++ ++|||+||.+..+ . ...+++| |+++++|+.+ ++|..+.++.
T Consensus 238 r~~~~~~~~~-------~~i~v~GG~~~~~---------------~---~~~~~~y-d~~~~~W~~~~~~~~~r~~~~ 289 (306)
T 3ii7_A 238 GVTVKCAAVG-------SIVYVLAGFQGVG---------------R---LGHILEY-NTETDKWVANSKVRAFPVTSC 289 (306)
T ss_dssp BSCCEEEEET-------TEEEEEECBCSSS---------------B---CCEEEEE-ETTTTEEEEEEEEECCSCTTC
T ss_pred ccceeEEEEC-------CEEEEEeCcCCCe---------------e---eeeEEEE-cCCCCeEEeCCCcccccceeE
Confidence 7788888888 9999999986553 0 1134558 9999999954 4555555444
No 2
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=312.87 Aligned_cols=271 Identities=15% Similarity=0.174 Sum_probs=210.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcC----CCCCCccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWD----PITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~----~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
.+++|||.+++|.. ++++.+.+|..|++++ .+++|||+||.. .......+++++||+ .+++|+++++||.+|
T Consensus 14 ~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r 89 (315)
T 4asc_A 14 GAVAYDPAANECYC-ASLSSQVPKNHVSLVT-KENQVFVAGGLFYNEDNKEDPMSAYFLQFDH--LDSEWLGMPPLPSPR 89 (315)
T ss_dssp EEEEEETTTTEEEE-EECCCCSCSSEEEEEC-TTCCEEEEEEEEECSSCSSSCEEEEEEEEET--TTTEEEECCCBSSCE
T ss_pred ceEEECCCCCeEec-CCCCCCCCccceEEEE-ECCEEEEEcCcccCCCCCccccccceEEecC--CCCeEEECCCCCcch
Confidence 48899999999987 6666445787777665 899999999962 222234567999999 899999999999999
Q ss_pred cceEEEEECCcEEEEEeccCC--CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccC
Q 013264 208 SFFACAVVGASTVCVAGGHDG--QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~--~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 285 (446)
..|++++++ ++|||+||.+. ....++++++||+.+++|+.++++|.+|.. |++++.+++|||+||..... ...+
T Consensus 90 ~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~--~~~~ 165 (315)
T 4asc_A 90 CLFGLGEAL-NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLSHMDLVYVIGGKGSDR--KCLN 165 (315)
T ss_dssp ESCEEEEET-TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCTTS--CBCC
T ss_pred hceeEEEEC-CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEEECCEEEEEeCCCCCC--cccc
Confidence 999999998 89999999752 234689999999999999999999999987 88888999999999984322 4688
Q ss_pred cEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCC
Q 013264 286 DAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPK 356 (446)
Q Consensus 286 ~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~ 356 (446)
++++||+.+++|+.++ ++|.+|..|+++++++ +|||+||.+.. ++++++|+.+. ++
T Consensus 166 ~~~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~-- 230 (315)
T 4asc_A 166 KMCVYDPKKFEWKELA-----PMQTARSLFGATVHDG-----RIIVAAGVTDTGLTSSAEVYSITDNKWAPFE---AF-- 230 (315)
T ss_dssp CEEEEETTTTEEEECC-----CCSSCCBSCEEEEETT-----EEEEEEEECSSSEEEEEEEEETTTTEEEEEC---CC--
T ss_pred eEEEEeCCCCeEEECC-----CCCCchhceEEEEECC-----EEEEEeccCCCCccceEEEEECCCCeEEECC---CC--
Confidence 9999999999999998 6889999999999988 99999998765 34556677765 33
Q ss_pred cCCCCCCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeee-cCCCCcc
Q 013264 357 SVTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHV-HLPVGFS 435 (446)
Q Consensus 357 ~~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~-~~p~~~~ 435 (446)
+.+|..+++++++ ++|||+||.+......+ +........+++| |+++++|+.+ +.|...+
T Consensus 231 --p~~r~~~~~~~~~-------~~l~v~GG~~~~~~~~~---------~~~~~~~~~v~~y-d~~~~~W~~~~~~~r~~~ 291 (315)
T 4asc_A 231 --PQERSSLSLVSLV-------GTLYAIGGFATLETESG---------ELVPTELNDIWRY-NEEEKKWEGVLREIAYAA 291 (315)
T ss_dssp --SSCCBSCEEEEET-------TEEEEEEEEEEEECTTS---------CEEEEEEEEEEEE-ETTTTEEEEEESCSSCCS
T ss_pred --CCcccceeEEEEC-------CEEEEECCccccCcCCc---------cccccccCcEEEe-cCCCChhhhhccCCcCcc
Confidence 4567888999988 99999999854210000 0000123446678 9999999976 3444333
Q ss_pred cccccceeE
Q 013264 436 GFPCSASFL 444 (446)
Q Consensus 436 ~~~~~~~~~ 444 (446)
+.+.....+
T Consensus 292 ~~~~~~~~l 300 (315)
T 4asc_A 292 GATFLPVRL 300 (315)
T ss_dssp SCEEEEEEE
T ss_pred ceEEeCCEE
Confidence 444333333
No 3
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=2.7e-39 Score=308.84 Aligned_cols=254 Identities=20% Similarity=0.345 Sum_probs=211.8
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+++||+.+++|..++++| .+|..|++++ .+++|||+||..+. ...+++++||+ .+++|+++++||.+|..|
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~~~--~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~ 102 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELP--SRRCRAGMVY-MAGLVFAVGGFNGS--LRVRTVDSYDP--VKDQWTSVANMRDRRSTL 102 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS--SCCBSCEEEE-ETTEEEEESCBCSS--SBCCCEEEEET--TTTEEEEECCCSSCCBSC
T ss_pred CcEEEEcCcCCcEeEcccCC--cccccceEEE-ECCEEEEEeCcCCC--ccccceEEECC--CCCceeeCCCCCccccce
Confidence 45889999999999999998 5888887766 79999999998654 35789999999 899999999999999999
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
++++++ ++|||+||.+... .++++++||+.+++|+.++++|.+|.. +++++++++||++||.+... ....+++++|
T Consensus 103 ~~~~~~-~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~-~~~~~~~~~y 178 (302)
T 2xn4_A 103 GAAVLN-GLLYAVGGFDGST-GLSSVEAYNIKSNEWFHVAPMNTRRSS-VGVGVVGGLLYAVGGYDVAS-RQCLSTVECY 178 (302)
T ss_dssp EEEEET-TEEEEEEEECSSC-EEEEEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEETTT-TEECCCEEEE
T ss_pred EEEEEC-CEEEEEcCCCCCc-cCceEEEEeCCCCeEeecCCCCCcccC-ceEEEECCEEEEEeCCCCCC-CccccEEEEE
Confidence 999998 8999999987643 578999999999999999999999997 78888999999999986532 1357899999
Q ss_pred eCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCcCCCC
Q 013264 291 DPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKSVTEG 361 (446)
Q Consensus 291 d~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~~~~~ 361 (446)
|+.+++|+.++ ++|.+|..|+++++++ +|||+||.++. ++++++|+.+. ++ +.+
T Consensus 179 d~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~----~~~ 241 (302)
T 2xn4_A 179 NATTNEWTYIA-----EMSTRRSGAGVGVLNN-----LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVA---DM----NMC 241 (302)
T ss_dssp ETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEECCBSSSSBCCCEEEEETTTTEEEEEC---CC----SSC
T ss_pred eCCCCcEEECC-----CCccccccccEEEECC-----EEEEECCCCCCcccceEEEEeCCCCCEeeCC---CC----CCc
Confidence 99999999998 6889999999999988 99999998754 34556787765 33 346
Q ss_pred CCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeeec--CCCCccccc
Q 013264 362 SSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHVH--LPVGFSGFP 438 (446)
Q Consensus 362 R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~~--~p~~~~~~~ 438 (446)
|..+++++++ ++|||+||.+... ....+++| |+++++|+.++ +|..+..+.
T Consensus 242 r~~~~~~~~~-------~~i~v~GG~~~~~------------------~~~~v~~y-d~~~~~W~~~~~~~~~~r~~~~ 294 (302)
T 2xn4_A 242 RRNAGVCAVN-------GLLYVVGGDDGSC------------------NLASVEYY-NPTTDKWTVVSSCMSTGRSYAG 294 (302)
T ss_dssp CBSCEEEEET-------TEEEEECCBCSSS------------------BCCCEEEE-ETTTTEEEECSSCCSSCCBSCE
T ss_pred cccCeEEEEC-------CEEEEECCcCCCc------------------ccccEEEE-cCCCCeEEECCcccCcccccce
Confidence 7788888887 9999999986542 01124558 99999999764 666665554
No 4
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=6e-39 Score=307.45 Aligned_cols=255 Identities=23% Similarity=0.367 Sum_probs=211.7
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCC--CCCCccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDP--ITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~--~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
...+++||+.+++|..++++| .+|..|++++ .+++|||+||... ......+++++||+ .+++|+++++||.+|
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r 112 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQ--VPRSGLAGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNP--MTNQWSPCAPMSVPR 112 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCS--SCCBSCEEEE-ETTEEEEECCEEEETTEEEECCCEEEEET--TTTEEEECCCCSSCC
T ss_pred cceEEEEcCCCCeEeECCCCC--cccccceEEE-ECCEEEEECCCcCCCCCCeecceEEEECC--CCCeEeECCCCCcCc
Confidence 345899999999999999998 6888887766 7999999999731 11235789999999 899999999999999
Q ss_pred cceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcE
Q 013264 208 SFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v 287 (446)
..|++++++ ++|||+||..... .++++++||+.+++|+.++++|.+|.. +++++++++||++||.+... ..+++
T Consensus 113 ~~~~~~~~~-~~iyv~GG~~~~~-~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~---~~~~~ 186 (308)
T 1zgk_A 113 NRIGVGVID-GHIYAVGGSHGCI-HHNSVERYEPERDEWHLVAPMLTRRIG-VGVAVLNRLLYAVGGFDGTN---RLNSA 186 (308)
T ss_dssp BTCEEEEET-TEEEEECCEETTE-ECCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEECCBCSSC---BCCCE
T ss_pred cccEEEEEC-CEEEEEcCCCCCc-ccccEEEECCCCCeEeECCCCCccccc-eEEEEECCEEEEEeCCCCCC---cCceE
Confidence 999999998 8999999987643 578999999999999999999999997 78888899999999987543 47899
Q ss_pred EEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCcC
Q 013264 288 ECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKSV 358 (446)
Q Consensus 288 ~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~~ 358 (446)
++||+.+++|+.++ ++|.+|..++++++++ +|||+||.++. ++++++|+.+. ++
T Consensus 187 ~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~---- 249 (308)
T 1zgk_A 187 ECYYPERNEWRMIT-----AMNTIRSGAGVCVLHN-----CIYAAGGYDGQDQLNSVERYDVETETWTFVA---PM---- 249 (308)
T ss_dssp EEEETTTTEEEECC-----CCSSCCBSCEEEEETT-----EEEEECCBCSSSBCCCEEEEETTTTEEEECC---CC----
T ss_pred EEEeCCCCeEeeCC-----CCCCccccceEEEECC-----EEEEEeCCCCCCccceEEEEeCCCCcEEECC---CC----
Confidence 99999999999998 6889999999999987 99999998754 34556677665 33
Q ss_pred CCCCCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeee-cCCCCcccc
Q 013264 359 TEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHV-HLPVGFSGF 437 (446)
Q Consensus 359 ~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~-~~p~~~~~~ 437 (446)
+.+|..+++++++ ++|||+||.+... ....+++| |+++++|+.+ ++|..+.++
T Consensus 250 p~~r~~~~~~~~~-------~~i~v~GG~~~~~------------------~~~~v~~y-d~~~~~W~~~~~~p~~r~~~ 303 (308)
T 1zgk_A 250 KHRRSALGITVHQ-------GRIYVLGGYDGHT------------------FLDSVECY-DPDTDTWSEVTRMTSGRSGV 303 (308)
T ss_dssp SSCCBSCEEEEET-------TEEEEECCBCSSC------------------BCCEEEEE-ETTTTEEEEEEECSSCCBSC
T ss_pred CCCccceEEEEEC-------CEEEEEcCcCCCc------------------ccceEEEE-cCCCCEEeecCCCCCCcccc
Confidence 3567788888887 9999999986542 11234568 9999999954 577766655
Q ss_pred c
Q 013264 438 P 438 (446)
Q Consensus 438 ~ 438 (446)
.
T Consensus 304 ~ 304 (308)
T 1zgk_A 304 G 304 (308)
T ss_dssp E
T ss_pred e
Confidence 4
No 5
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.6e-38 Score=301.67 Aligned_cols=253 Identities=21% Similarity=0.367 Sum_probs=212.2
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc---EEEccCCccC
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR---WRRVKPMSVA 206 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~---W~~~~~~p~~ 206 (446)
...+++||+.+++|..++.+| .+|..|++++ .+++||++||..+. ...+++++||+ .+++ |+++++||.+
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~l~v~GG~~~~--~~~~~~~~~d~--~~~~~~~W~~~~~~p~~ 102 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSIT--RKRRYVASVS-LHDRIYVIGGYDGR--SRLSSVECLDY--TADEDGVWYSVAPMNVR 102 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCS--SCCBSCEEEE-ETTEEEEECCBCSS--CBCCCEEEEET--TCCTTCCCEEECCCSSC
T ss_pred eeEEEEEcCCCCeEEeCCCCC--hhhccccEEE-ECCEEEEEcCCCCC--ccCceEEEEEC--CCCCCCeeEECCCCCCC
Confidence 346899999999999999988 5888887776 79999999998743 35789999999 8899 9999999999
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCc
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
|..|++++++ ++|||+||..... .++++++||+.+++|+.++++|.+|.. +++++.+++||++||.+... ..++
T Consensus 103 r~~~~~~~~~-~~lyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~---~~~~ 176 (301)
T 2vpj_A 103 RGLAGATTLG-DMIYVSGGFDGSR-RHTSMERYDPNIDQWSMLGDMQTAREG-AGLVVASGVIYCLGGYDGLN---ILNS 176 (301)
T ss_dssp CBSCEEEEET-TEEEEECCBCSSC-BCCEEEEEETTTTEEEEEEECSSCCBS-CEEEEETTEEEEECCBCSSC---BCCC
T ss_pred ccceeEEEEC-CEEEEEcccCCCc-ccceEEEEcCCCCeEEECCCCCCCccc-ceEEEECCEEEEECCCCCCc---ccce
Confidence 9999999998 8999999987653 578999999999999999999999987 78888999999999986543 6789
Q ss_pred EEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCc
Q 013264 287 AECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKS 357 (446)
Q Consensus 287 v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~ 357 (446)
+++||+.+++|+.++ ++|.+|..|+++++++ +|||+||.++. +.++++|+.+. ++
T Consensus 177 ~~~~d~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~---~~--- 240 (301)
T 2vpj_A 177 VEKYDPHTGHWTNVT-----PMATKRSGAGVALLND-----HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT---SM--- 240 (301)
T ss_dssp EEEEETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEECCBCSSSBCCCEEEEETTTTEEEEEC---CC---
T ss_pred EEEEeCCCCcEEeCC-----CCCcccccceEEEECC-----EEEEEeCCCCCcccceEEEEeCCCCcEEECC---CC---
Confidence 999999999999997 6889999999999988 99999998754 34556777765 33
Q ss_pred CCCCCCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeee-cCCCCccc
Q 013264 358 VTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHV-HLPVGFSG 436 (446)
Q Consensus 358 ~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~-~~p~~~~~ 436 (446)
+.+|..+++++++ ++|||+||.+... ....+++| |+++++|+.+ ++|..+.+
T Consensus 241 -p~~r~~~~~~~~~-------~~i~v~GG~~~~~------------------~~~~v~~y-d~~~~~W~~~~~~~~~r~~ 293 (301)
T 2vpj_A 241 -TTPRCYVGATVLR-------GRLYAIAGYDGNS------------------LLSSIECY-DPIIDSWEVVTSMGTQRCD 293 (301)
T ss_dssp -SSCCBSCEEEEET-------TEEEEECCBCSSS------------------BEEEEEEE-ETTTTEEEEEEEEEEEEES
T ss_pred -CCcccceeEEEEC-------CEEEEEcCcCCCc------------------ccccEEEE-cCCCCeEEEcCCCCccccc
Confidence 3467788888887 9999999986542 12345668 9999999954 46655555
Q ss_pred cc
Q 013264 437 FP 438 (446)
Q Consensus 437 ~~ 438 (446)
+.
T Consensus 294 ~~ 295 (301)
T 2vpj_A 294 AG 295 (301)
T ss_dssp CE
T ss_pred ce
Confidence 44
No 6
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.3e-38 Score=306.44 Aligned_cols=263 Identities=16% Similarity=0.246 Sum_probs=203.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCC----CCCccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPI----TLEPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~----~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
.+++|||.+++|... +++.+.||..|++++ .+++|||+||.... .....+++++||+ .+++|+++++||.+|
T Consensus 25 ~~~~yd~~~~~W~~~-~~~~~~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r 100 (318)
T 2woz_A 25 AAVAYDPMENECYLT-ALAEQIPRNHSSIVT-QQNQVYVVGGLYVDEENKDQPLQSYFFQLDN--VSSEWVGLPPLPSAR 100 (318)
T ss_dssp EEEEEETTTTEEEEE-EECTTSCSSEEEEEC-SSSCEEEEESSCC-------CCCBEEEEEET--TTTEEEECSCBSSCB
T ss_pred ceEEECCCCCceecc-cCCccCCccceEEEE-ECCEEEEECCcccCccccCCCccccEEEEeC--CCCcEEECCCCCccc
Confidence 378999999999984 444335777666654 89999999996311 1123456999999 899999999999999
Q ss_pred cceEEEEECCcEEEEEeccCC-CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCc
Q 013264 208 SFFACAVVGASTVCVAGGHDG-QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~-~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
..|++++++ ++|||+||... ....++++++||+.+++|+.++++|.+|.. |++++.+++||++||..... ...++
T Consensus 101 ~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~--~~~~~ 176 (318)
T 2woz_A 101 CLFGLGEVD-DKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVISHNGMIYCLGGKTDDK--KCTNR 176 (318)
T ss_dssp CSCEEEEET-TEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEEETTEEEEECCEESSS--CBCCC
T ss_pred cccceEEEC-CEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEEECCEEEEEcCCCCCC--Cccce
Confidence 999999998 89999999863 334678999999999999999999999987 78888999999999975332 36789
Q ss_pred EEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCc
Q 013264 287 AECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKS 357 (446)
Q Consensus 287 v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~ 357 (446)
+++||+.+++|+.++ ++|.+|..|+++++++ +|||+||.... ++++++|+.+. ++|
T Consensus 177 ~~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~p-- 241 (318)
T 2woz_A 177 VFIYNPKKGDWKDLA-----PMKTPRSMFGVAIHKG-----KIVIAGGVTEDGLSASVEAFDLKTNKWEVMT---EFP-- 241 (318)
T ss_dssp EEEEETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEEEEEETTEEEEEEEEEETTTCCEEECC---CCS--
T ss_pred EEEEcCCCCEEEECC-----CCCCCcccceEEEECC-----EEEEEcCcCCCCccceEEEEECCCCeEEECC---CCC--
Confidence 999999999999998 6889999999999988 99999998764 34556677764 343
Q ss_pred CCCCCCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeeecCCCCcccc
Q 013264 358 VTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHVHLPVGFSGF 437 (446)
Q Consensus 358 ~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~~~p~~~~~~ 437 (446)
.+|..+++++++ ++|||+||........+ +........+++| |+++++|+.+ +|..+.++
T Consensus 242 --~~r~~~~~~~~~-------~~i~v~GG~~~~~~~~~---------~~~~~~~~~v~~y-d~~~~~W~~~-~~~~r~~~ 301 (318)
T 2woz_A 242 --QERSSISLVSLA-------GSLYAIGGFAMIQLESK---------EFAPTEVNDIWKY-EDDKKEWAGM-LKEIRYAS 301 (318)
T ss_dssp --SCCBSCEEEEET-------TEEEEECCBCCBC-------------CCBCCBCCCEEEE-ETTTTEEEEE-ESCCGGGT
T ss_pred --CcccceEEEEEC-------CEEEEECCeeccCCCCc---------eeccceeeeEEEE-eCCCCEehhh-cccccccc
Confidence 467788899888 99999999865321000 0000111224457 9999999987 45444443
No 7
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=1.4e-34 Score=282.73 Aligned_cols=251 Identities=15% Similarity=0.116 Sum_probs=193.1
Q ss_pred eEEEEECC--CCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCc-C--CCCCCccCeEEEEeCcCCCCcEEEccCCc-c
Q 013264 132 GLTIFNAS--NGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGW-D--PITLEPVPDVYVLDMVNNSSRWRRVKPMS-V 205 (446)
Q Consensus 132 ~~~~ydp~--~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~-~--~~~~~~~~~v~~~d~~~~t~~W~~~~~~p-~ 205 (446)
.+++||+. +++|..++++|. .+|..|++++ ++++|||+||. . .......+++++||+ .+++|+++++|+ .
T Consensus 32 ~~~~~d~~~~~~~W~~~~~~p~-~~R~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~p~ 107 (357)
T 2uvk_A 32 AWYKLDTQAKDKKWTALAAFPG-GPRDQATSAF-IDGNLYVFGGIGKNSEGLTQVFNDVHKYNP--KTNSWVKLMSHAPM 107 (357)
T ss_dssp CEEEEETTSSSCCEEECCCCTT-CCCBSCEEEE-ETTEEEEECCEEECTTSCEEECCCEEEEET--TTTEEEECSCCCSS
T ss_pred eEEEEccccCCCCeeECCCCCC-CcCccceEEE-ECCEEEEEcCCCCCCCccceeeccEEEEeC--CCCcEEECCCCCCc
Confidence 48899998 499999999883 3788888776 79999999998 3 222345789999999 899999999998 9
Q ss_pred CccceEEEEECCcEEEEEeccCCCC---------------------------------CCCCeEEEEECCCCcEEecCCC
Q 013264 206 ARSFFACAVVGASTVCVAGGHDGQK---------------------------------NALKSAEVYDVEADEWRMLPEM 252 (446)
Q Consensus 206 ~r~~~~~~~~~d~~iyv~GG~~~~~---------------------------------~~~~~~~~yd~~t~~W~~~~~~ 252 (446)
+|..|++++++ ++|||+||.+... ..++++++||+.+++|+.++++
T Consensus 108 ~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~ 186 (357)
T 2uvk_A 108 GMAGHVTFVHN-GKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGES 186 (357)
T ss_dssp CCSSEEEEEET-TEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEEC
T ss_pred ccccceEEEEC-CEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCC
Confidence 99999999988 8999999986431 1358999999999999999999
Q ss_pred CccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeC--CCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEE
Q 013264 253 DEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDP--KTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLW 330 (446)
Q Consensus 253 ~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~--~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~ly 330 (446)
|.++...+++++.+++|||+||..... ...+++++||+ ++++|+.++.+ +.|..|..|+++++++ +||
T Consensus 187 p~~~~~~~~~~~~~~~iyv~GG~~~~~--~~~~~v~~~d~d~~~~~W~~~~~~---~~~~~~~~~~~~~~~~-----~iy 256 (357)
T 2uvk_A 187 PWYGTAGAAVVNKGDKTWLINGEAKPG--LRTDAVFELDFTGNNLKWNKLAPV---SSPDGVAGGFAGISND-----SLI 256 (357)
T ss_dssp SSCCCBSCEEEEETTEEEEECCEEETT--EECCCEEEEECC---CEEEECCCS---STTTCCBSCEEEEETT-----EEE
T ss_pred CCCCcccccEEEECCEEEEEeeecCCC--cccCceEEEEecCCCCcEEecCCC---CCCcccccceEEEECC-----EEE
Confidence 987654478889999999999975432 45778999986 99999999843 3344566888888888 999
Q ss_pred EEcCCCCC--------------------------CceeEeceEEeeccCCCCcCCCCCCCCeEEEeeccccCCCceEEEE
Q 013264 331 FLGKEQQQ--------------------------NGEVVKGKIVSSIVPLPKSVTEGSSSPCVSVTTLHNSQQQQKVFVM 384 (446)
Q Consensus 331 v~GG~~~~--------------------------~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~~~~~~~~~~~~~l~v~ 384 (446)
|+||.... ++++++|+.+.. + +.+|..+++++++ ++|||+
T Consensus 257 v~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~---~----p~~r~~~~~~~~~-------~~i~v~ 322 (357)
T 2uvk_A 257 FAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGE---L----SQGRAYGVSLPWN-------NSLLII 322 (357)
T ss_dssp EECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEE---C----SSCCBSSEEEEET-------TEEEEE
T ss_pred EEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCC---C----CCCcccceeEEeC-------CEEEEE
Confidence 99996321 446678888754 3 3567778888887 999999
Q ss_pred eccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeeec
Q 013264 385 TGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHVH 429 (446)
Q Consensus 385 GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~~ 429 (446)
||.+..+. ...+ ++.| +.++++|.+..
T Consensus 323 GG~~~~~~--------------~~~~---v~~l-~~~~~~~~~~~ 349 (357)
T 2uvk_A 323 GGETAGGK--------------AVTD---SVLI-TVKDNKVTVQN 349 (357)
T ss_dssp EEECGGGC--------------EEEE---EEEE-EC-CCSCEEEC
T ss_pred eeeCCCCC--------------Eeee---EEEE-EEcCcEeEeee
Confidence 99876641 1122 3335 89999999553
No 8
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=8.1e-35 Score=279.53 Aligned_cols=221 Identities=20% Similarity=0.260 Sum_probs=189.9
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCC-CCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDP-ITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~-~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
..++.||+.+++|+.++++| .+|..|++++ .+++|||+||.+. ......+++++||+ .+++|+++++||.+|..
T Consensus 67 ~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~ 141 (315)
T 4asc_A 67 AYFLQFDHLDSEWLGMPPLP--SPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDR--LSFKWGESDPLPYVVYG 141 (315)
T ss_dssp EEEEEEETTTTEEEECCCBS--SCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEET--TTTEEEECCCCSSCCBS
T ss_pred cceEEecCCCCeEEECCCCC--cchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECC--CCCcEeECCCCCCcccc
Confidence 34899999999999999999 6898888776 7999999999742 22346889999999 89999999999999999
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEE
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
|++++++ ++|||+||.......++++++||+.+++|+.++++|.+|.. +++++++++||++||.+... ..+++++
T Consensus 142 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~---~~~~~~~ 216 (315)
T 4asc_A 142 HTVLSHM-DLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSL-FGATVHDGRIIVAAGVTDTG---LTSSAEV 216 (315)
T ss_dssp CEEEEET-TEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEEETTEEEEEEEECSSS---EEEEEEE
T ss_pred eeEEEEC-CEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhc-eEEEEECCEEEEEeccCCCC---ccceEEE
Confidence 9999998 89999999965555789999999999999999999999997 78889999999999986542 5779999
Q ss_pred EeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC------------------CceeEeceEEeec
Q 013264 290 YDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ------------------NGEVVKGKIVSSI 351 (446)
Q Consensus 290 yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~------------------~~~~~~W~~~~~~ 351 (446)
||+++++|+.++ ++|.+|..|+++++++ +|||+||.+.. ++++++|+.+.
T Consensus 217 yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-- 284 (315)
T 4asc_A 217 YSITDNKWAPFE-----AFPQERSSLSLVSLVG-----TLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL-- 284 (315)
T ss_dssp EETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE--
T ss_pred EECCCCeEEECC-----CCCCcccceeEEEECC-----EEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc--
Confidence 999999999998 6889999999999988 99999998531 34556777762
Q ss_pred cCCCCcCCCCCCCCeEEEeeccccCCCceEEEEecc
Q 013264 352 VPLPKSVTEGSSSPCVSVTTLHNSQQQQKVFVMTGN 387 (446)
Q Consensus 352 ~~~p~~~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~ 387 (446)
..+|..+++++++ ++|||+...
T Consensus 285 -------~~~r~~~~~~~~~-------~~l~v~~~~ 306 (315)
T 4asc_A 285 -------REIAYAAGATFLP-------VRLNVLRLT 306 (315)
T ss_dssp -------SCSSCCSSCEEEE-------EEECGGGSE
T ss_pred -------cCCcCccceEEeC-------CEEEEEEeh
Confidence 3456778888888 999998654
No 9
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=1.5e-34 Score=276.79 Aligned_cols=231 Identities=19% Similarity=0.298 Sum_probs=183.0
Q ss_pred CCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccC---CC
Q 013264 153 IPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHD---GQ 229 (446)
Q Consensus 153 ~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~---~~ 229 (446)
.+|..++++. .++.||++||.. ....+++++||+ .+++|..++++|.+|..|++++++ ++|||+||.. ..
T Consensus 13 ~~~~~~~~~~-~~~~i~v~GG~~---~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~ 85 (308)
T 1zgk_A 13 LVPRGSHAPK-VGRLIYTAGGYF---RQSLSYLEAYNP--SNGTWLRLADLQVPRSGLAGCVVG-GLLYAVGGRNNSPDG 85 (308)
T ss_dssp --------CC-CCCCEEEECCBS---SSBCCCEEEEET--TTTEEEECCCCSSCCBSCEEEEET-TEEEEECCEEEETTE
T ss_pred eeeCCccccC-CCCEEEEEeCcC---CCCcceEEEEcC--CCCeEeECCCCCcccccceEEEEC-CEEEEECCCcCCCCC
Confidence 3566666655 899999999983 236889999999 899999999999999999999998 8999999983 22
Q ss_pred CCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCC
Q 013264 230 KNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSL 309 (446)
Q Consensus 230 ~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~ 309 (446)
...++++++||+.+++|+.+++||.+|.. +++++.+++||++||.... ...+++++||+.+++|+.++ ++|
T Consensus 86 ~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~---~~~~~~~~yd~~~~~W~~~~-----~~p 156 (308)
T 1zgk_A 86 NTDSSALDCYNPMTNQWSPCAPMSVPRNR-IGVGVIDGHIYAVGGSHGC---IHHNSVERYEPERDEWHLVA-----PML 156 (308)
T ss_dssp EEECCCEEEEETTTTEEEECCCCSSCCBT-CEEEEETTEEEEECCEETT---EECCCEEEEETTTTEEEECC-----CCS
T ss_pred CeecceEEEECCCCCeEeECCCCCcCccc-cEEEEECCEEEEEcCCCCC---cccccEEEECCCCCeEeECC-----CCC
Confidence 23578999999999999999999999997 7888899999999998653 35789999999999999998 688
Q ss_pred CCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCcCCCCCCCCeEEEeeccccCCCce
Q 013264 310 SPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKSVTEGSSSPCVSVTTLHNSQQQQK 380 (446)
Q Consensus 310 ~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~~~~~~~~~~~~~ 380 (446)
.+|..|+++++++ +|||+||.++. ++++++|+.+. ++ +.+|..+++++++ ++
T Consensus 157 ~~r~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~---~~----p~~r~~~~~~~~~-------~~ 217 (308)
T 1zgk_A 157 TRRIGVGVAVLNR-----LLYAVGGFDGTNRLNSAECYYPERNEWRMIT---AM----NTIRSGAGVCVLH-------NC 217 (308)
T ss_dssp SCCBSCEEEEETT-----EEEEECCBCSSCBCCCEEEEETTTTEEEECC---CC----SSCCBSCEEEEET-------TE
T ss_pred ccccceEEEEECC-----EEEEEeCCCCCCcCceEEEEeCCCCeEeeCC---CC----CCccccceEEEEC-------CE
Confidence 9999999999987 99999998754 33455677664 33 3467888898887 99
Q ss_pred EEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeee-cCCCCcccc
Q 013264 381 VFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHV-HLPVGFSGF 437 (446)
Q Consensus 381 l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~-~~p~~~~~~ 437 (446)
|||+||..... . ...+++| |+++++|+.+ ++|..+.++
T Consensus 218 iyv~GG~~~~~---------------~---~~~v~~y-d~~~~~W~~~~~~p~~r~~~ 256 (308)
T 1zgk_A 218 IYAAGGYDGQD---------------Q---LNSVERY-DVETETWTFVAPMKHRRSAL 256 (308)
T ss_dssp EEEECCBCSSS---------------B---CCCEEEE-ETTTTEEEECCCCSSCCBSC
T ss_pred EEEEeCCCCCC---------------c---cceEEEE-eCCCCcEEECCCCCCCccce
Confidence 99999987543 0 1124558 9999999965 355544433
No 10
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.8e-34 Score=277.49 Aligned_cols=218 Identities=15% Similarity=0.250 Sum_probs=188.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.++.||+.+++|+.++++| .+|..|++++ .+++|||+||.........+++++||+ .+++|+++++||.+|..|+
T Consensus 79 ~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~--~~~~W~~~~~~p~~r~~~~ 153 (318)
T 2woz_A 79 YFFQLDNVSSEWVGLPPLP--SARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDP--VAAKWSEVKNLPIKVYGHN 153 (318)
T ss_dssp EEEEEETTTTEEEECSCBS--SCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEET--TTTEEEEECCCSSCEESCE
T ss_pred cEEEEeCCCCcEEECCCCC--ccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeC--CCCCEeECCCCCCcccccE
Confidence 4889999999999999999 6888888776 799999999986433446889999999 8999999999999999999
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEe
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+++++ ++|||+||.......++++++||+.+++|+.++++|.+|.. +++++++++|||+||.+.. ...+++++||
T Consensus 154 ~~~~~-~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~---~~~~~~~~yd 228 (318)
T 2woz_A 154 VISHN-GMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSM-FGVAIHKGKIVIAGGVTED---GLSASVEAFD 228 (318)
T ss_dssp EEEET-TEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEEEEEETT---EEEEEEEEEE
T ss_pred EEEEC-CEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCccc-ceEEEECCEEEEEcCcCCC---CccceEEEEE
Confidence 99998 89999999865555689999999999999999999999987 7888999999999998653 2567999999
Q ss_pred CCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC------------------CceeEeceEEeeccC
Q 013264 292 PKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ------------------NGEVVKGKIVSSIVP 353 (446)
Q Consensus 292 ~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~------------------~~~~~~W~~~~~~~~ 353 (446)
+++++|+.++ ++|.+|..|+++++++ +|||+||.... ++++++|+.+ +
T Consensus 229 ~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~--~-- 294 (318)
T 2woz_A 229 LKTNKWEVMT-----EFPQERSSISLVSLAG-----SLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM--L-- 294 (318)
T ss_dssp TTTCCEEECC-----CCSSCCBSCEEEEETT-----EEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE--E--
T ss_pred CCCCeEEECC-----CCCCcccceEEEEECC-----EEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh--c--
Confidence 9999999998 6888999999999988 99999998641 3455678776 2
Q ss_pred CCCcCCCCCCCCeEEEeeccccCCCceEEEEe
Q 013264 354 LPKSVTEGSSSPCVSVTTLHNSQQQQKVFVMT 385 (446)
Q Consensus 354 ~p~~~~~~R~~~~~~~~~~~~~~~~~~l~v~G 385 (446)
..+|..+++++++ ++|||+.
T Consensus 295 -----~~~r~~~~~~~~~-------~~iyi~~ 314 (318)
T 2woz_A 295 -----KEIRYASGASCLA-------TRLNLFK 314 (318)
T ss_dssp -----SCCGGGTTCEEEE-------EEEEGGG
T ss_pred -----ccccccccceeeC-------CEEEEEE
Confidence 3456778888888 9999874
No 11
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-33 Score=269.80 Aligned_cols=213 Identities=24% Similarity=0.397 Sum_probs=183.3
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..++.||+.+++|+.+++++ .+|..|++++ ++++|||+||.++. ...+++++||+ .+++|+.+++||.+|..|
T Consensus 77 ~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~--~~~~~~~~~d~--~~~~W~~~~~~p~~r~~~ 149 (302)
T 2xn4_A 77 RTVDSYDPVKDQWTSVANMR--DRRSTLGAAV-LNGLLYAVGGFDGS--TGLSSVEAYNI--KSNEWFHVAPMNTRRSSV 149 (302)
T ss_dssp CCEEEEETTTTEEEEECCCS--SCCBSCEEEE-ETTEEEEEEEECSS--CEEEEEEEEET--TTTEEEEECCCSSCCBSC
T ss_pred cceEEECCCCCceeeCCCCC--ccccceEEEE-ECCEEEEEcCCCCC--ccCceEEEEeC--CCCeEeecCCCCCcccCc
Confidence 45899999999999999999 6888888776 79999999998654 35789999999 899999999999999999
Q ss_pred EEEEECCcEEEEEeccCCCC-CCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQK-NALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~-~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
++++++ ++||++||.+... ..++++++||+.+++|+.++++|.+|.. +++++.+++||++||.++. ...+++++
T Consensus 150 ~~~~~~-~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~---~~~~~~~~ 224 (302)
T 2xn4_A 150 GVGVVG-GLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSG-AGVGVLNNLLYAVGGHDGP---LVRKSVEV 224 (302)
T ss_dssp EEEEET-TEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBSSS---SBCCCEEE
T ss_pred eEEEEC-CEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccccc-ccEEEECCEEEEECCCCCC---cccceEEE
Confidence 999998 8999999987553 2478999999999999999999999987 7888999999999998654 35789999
Q ss_pred EeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCcCCC
Q 013264 290 YDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKSVTE 360 (446)
Q Consensus 290 yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~~~~ 360 (446)
||+++++|+.++ ++|.+|..++++.+++ +|||+||.++. ++++++|+.+.. + ++.
T Consensus 225 yd~~~~~W~~~~-----~~~~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~--~----~~~ 288 (302)
T 2xn4_A 225 YDPTTNAWRQVA-----DMNMCRRNAGVCAVNG-----LLYVVGGDDGSCNLASVEYYNPTTDKWTVVSS--C----MST 288 (302)
T ss_dssp EETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEECCBCSSSBCCCEEEEETTTTEEEECSS--C----CSS
T ss_pred EeCCCCCEeeCC-----CCCCccccCeEEEECC-----EEEEECCcCCCcccccEEEEcCCCCeEEECCc--c----cCc
Confidence 999999999998 6888999999999987 99999998754 335556776531 2 356
Q ss_pred CCCCCeEEEee
Q 013264 361 GSSSPCVSVTT 371 (446)
Q Consensus 361 ~R~~~~~~~~~ 371 (446)
+|..+++++++
T Consensus 289 ~r~~~~~~~~~ 299 (302)
T 2xn4_A 289 GRSYAGVTVID 299 (302)
T ss_dssp CCBSCEEEEEE
T ss_pred ccccceEEEec
Confidence 78889999987
No 12
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=2e-33 Score=274.48 Aligned_cols=253 Identities=16% Similarity=0.241 Sum_probs=181.2
Q ss_pred ecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCC--CCcEEEccCCc-cCccceEEEEECCcEEE
Q 013264 145 RIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNN--SSRWRRVKPMS-VARSFFACAVVGASTVC 221 (446)
Q Consensus 145 ~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~--t~~W~~~~~~p-~~r~~~~~~~~~d~~iy 221 (446)
.+++|| .+|..+++++ ++++|||+||... +++++||+ . +++|+++++|| .+|..|++++++ ++||
T Consensus 2 ~l~~lP--~~r~~~~~~~-~~~~iyv~GG~~~------~~~~~~d~--~~~~~~W~~~~~~p~~~R~~~~~~~~~-~~ly 69 (357)
T 2uvk_A 2 VLPETP--VPFKSGTGAI-DNDTVYIGLGSAG------TAWYKLDT--QAKDKKWTALAAFPGGPRDQATSAFID-GNLY 69 (357)
T ss_dssp CSCCCS--SCCCSCEEEE-ETTEEEEECGGGT------TCEEEEET--TSSSCCEEECCCCTTCCCBSCEEEEET-TEEE
T ss_pred CCCCCC--ccccceEEEE-ECCEEEEEeCcCC------CeEEEEcc--ccCCCCeeECCCCCCCcCccceEEEEC-CEEE
Confidence 467777 5787766655 7999999999753 47999999 6 59999999999 899999999998 8999
Q ss_pred EEecc-C---CCCCCCCeEEEEECCCCcEEecCCCC-ccCCcceEEEEECCEEEEEeCCCCCCC----------------
Q 013264 222 VAGGH-D---GQKNALKSAEVYDVEADEWRMLPEMD-EERDECQGVCLEGDRFFVVSGYGTESQ---------------- 280 (446)
Q Consensus 222 v~GG~-~---~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~lyv~GG~~~~~~---------------- 280 (446)
|+||. . .....++++++||+.+++|+.+++|+ .+|.. +++++.+++|||+||.+....
T Consensus 70 v~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~ 148 (357)
T 2uvk_A 70 VFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAG-HVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTA 148 (357)
T ss_dssp EECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSS-EEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHH
T ss_pred EEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCccccc-ceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccc
Confidence 99998 2 22235789999999999999999998 88887 778889999999999753210
Q ss_pred ---------------CcccCcEEEEeCCCCceEEcccCCCCCCCCCCCc-eEEEEecCCCcccEEEEEcCCCCC------
Q 013264 281 ---------------GRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGS-TATITSYRLQQHQWLWFLGKEQQQ------ 338 (446)
Q Consensus 281 ---------------~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~-~~~~~~~~~~~~~~lyv~GG~~~~------ 338 (446)
....+++++||+.+++|+.++ ++|.+|.. ++++++++ +|||+||....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~-----~~p~~~~~~~~~~~~~~-----~iyv~GG~~~~~~~~~~ 218 (357)
T 2uvk_A 149 IDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG-----ESPWYGTAGAAVVNKGD-----KTWLINGEAKPGLRTDA 218 (357)
T ss_dssp HHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE-----ECSSCCCBSCEEEEETT-----EEEEECCEEETTEECCC
T ss_pred hhhhhhhhccccccccCCcccEEEEeCCCCcEEECC-----CCCCCCcccccEEEECC-----EEEEEeeecCCCcccCc
Confidence 013579999999999999998 56766554 88888887 99999997532
Q ss_pred ------CceeEeceEEeeccCCCCcCCCCCCCCeEEEeeccccCCCceEEEEeccCCCCCC----CCCccccccccccCC
Q 013264 339 ------NGEVVKGKIVSSIVPLPKSVTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCS----SSSALSSFICNECEG 408 (446)
Q Consensus 339 ------~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~----~~~~~~~~~~~~~~~ 408 (446)
++++++|+.+.. +|. +..|..+++++++ ++|||+||....+.. .+.... ....
T Consensus 219 v~~~d~d~~~~~W~~~~~---~~~--~~~~~~~~~~~~~-------~~iyv~GG~~~~~~~~~~~~g~~~~-----~~~~ 281 (357)
T 2uvk_A 219 VFELDFTGNNLKWNKLAP---VSS--PDGVAGGFAGISN-------DSLIFAGGAGFKGSRENYQNGKNYA-----HEGL 281 (357)
T ss_dssp EEEEECC---CEEEECCC---SST--TTCCBSCEEEEET-------TEEEEECCEECTTHHHHHHTTCSST-----TTTC
T ss_pred eEEEEecCCCCcEEecCC---CCC--CcccccceEEEEC-------CEEEEEcCccccCCcccccccceec-----cccc
Confidence 125566776654 321 2345677788887 999999997543200 000000 0000
Q ss_pred cceEEEEEeccCCCcCeeee-cCCCCccccc
Q 013264 409 EGAFIMERDMSNGNIKWDHV-HLPVGFSGFP 438 (446)
Q Consensus 409 ~~~~~~~~y~d~~~~~W~~~-~~p~~~~~~~ 438 (446)
.....+++| |+++++|+.+ ++|..+.++.
T Consensus 282 ~~~~~~~~y-d~~~~~W~~~~~~p~~r~~~~ 311 (357)
T 2uvk_A 282 KKSYSTDIH-LWHNGKWDKSGELSQGRAYGV 311 (357)
T ss_dssp CCEECCEEE-ECC---CEEEEECSSCCBSSE
T ss_pred cceeeEEEE-ecCCCceeeCCCCCCCcccce
Confidence 122345668 9999999955 4666555443
No 13
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=3.5e-33 Score=266.91 Aligned_cols=214 Identities=21% Similarity=0.252 Sum_probs=184.3
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
...+++||+.+++|..++++| .+|..|++++ ++++|||+||.+.. ....+++++||+ .+++|+++++||.+|..
T Consensus 69 ~~~~~~~d~~~~~W~~~~~~p--~~r~~~~~~~-~~~~iyv~GG~~~~-~~~~~~~~~~d~--~~~~W~~~~~~p~~r~~ 142 (306)
T 3ii7_A 69 IKRMDCYNVVKDSWYSKLGPP--TPRDSLAACA-AEGKIYTSGGSEVG-NSALYLFECYDT--RTESWHTKPSMLTQRCS 142 (306)
T ss_dssp CCEEEEEETTTTEEEEEECCS--SCCBSCEEEE-ETTEEEEECCBBTT-BSCCCCEEEEET--TTTEEEEECCCSSCCBS
T ss_pred cceEEEEeCCCCeEEECCCCC--ccccceeEEE-ECCEEEEECCCCCC-CcEeeeEEEEeC--CCCceEeCCCCcCCcce
Confidence 346899999999999999998 6888888776 79999999998632 235789999999 89999999999999999
Q ss_pred eEEEEECCcEEEEEeccCCCCCC---CCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCc
Q 013264 210 FACAVVGASTVCVAGGHDGQKNA---LKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~---~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
|++++++ ++|||+||....... ++++++||+.+++|+.++++|.+|.. +++++++++||++||.+.. ...++
T Consensus 143 ~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~---~~~~~ 217 (306)
T 3ii7_A 143 HGMVEAN-GLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKN-HGLVFVKDKIFAVGGQNGL---GGLDN 217 (306)
T ss_dssp CEEEEET-TEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCEETT---EEBCC
T ss_pred eEEEEEC-CEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhc-ceEEEECCEEEEEeCCCCC---CCCce
Confidence 9999998 899999998765422 79999999999999999999999997 8888899999999998654 35789
Q ss_pred EEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCc
Q 013264 287 AECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKS 357 (446)
Q Consensus 287 v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~ 357 (446)
+++||+++++|+.++ ++|.+|..++++++++ +|||+||.++. ++++++|+.+..+
T Consensus 218 ~~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~------ 281 (306)
T 3ii7_A 218 VEYYDIKLNEWKMVS-----PMPWKGVTVKCAAVGS-----IVYVLAGFQGVGRLGHILEYNTETDKWVANSKV------ 281 (306)
T ss_dssp EEEEETTTTEEEECC-----CCSCCBSCCEEEEETT-----EEEEEECBCSSSBCCEEEEEETTTTEEEEEEEE------
T ss_pred EEEeeCCCCcEEECC-----CCCCCccceeEEEECC-----EEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCc------
Confidence 999999999999998 6889999999999987 99999998654 4466778887654
Q ss_pred CCCCCCCCeEEEee
Q 013264 358 VTEGSSSPCVSVTT 371 (446)
Q Consensus 358 ~~~~R~~~~~~~~~ 371 (446)
+.+|.+++++++.
T Consensus 282 -~~~r~~~~~~~~~ 294 (306)
T 3ii7_A 282 -RAFPVTSCLICVV 294 (306)
T ss_dssp -ECCSCTTCEEEEE
T ss_pred -ccccceeEEEEEC
Confidence 3567778887766
No 14
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=2.5e-32 Score=260.22 Aligned_cols=212 Identities=20% Similarity=0.331 Sum_probs=183.4
Q ss_pred ceeEEEEECCCCc---EEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC
Q 013264 130 QYGLTIFNASNGT---WERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA 206 (446)
Q Consensus 130 ~~~~~~ydp~~~~---W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~ 206 (446)
...++.||+.+++ |+.+++++ .+|..|++++ .+++||++||..+.. ..+++++||+ .+++|+++++||.+
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p--~~r~~~~~~~-~~~~lyv~GG~~~~~--~~~~~~~~d~--~~~~W~~~~~~p~~ 149 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMN--VRRGLAGATT-LGDMIYVSGGFDGSR--RHTSMERYDP--NIDQWSMLGDMQTA 149 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCS--SCCBSCEEEE-ETTEEEEECCBCSSC--BCCEEEEEET--TTTEEEEEEECSSC
T ss_pred CceEEEEECCCCCCCeeEECCCCC--CCccceeEEE-ECCEEEEEcccCCCc--ccceEEEEcC--CCCeEEECCCCCCC
Confidence 3468999999999 99999999 6888888776 799999999987543 4789999999 89999999999999
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCc
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
|..|++++++ ++||++||.+... .++++++||+.+++|+.++++|.+|.. +++++.+++||++||.+... ..++
T Consensus 150 r~~~~~~~~~-~~iyv~GG~~~~~-~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~~~~~i~v~GG~~~~~---~~~~ 223 (301)
T 2vpj_A 150 REGAGLVVAS-GVIYCLGGYDGLN-ILNSVEKYDPHTGHWTNVTPMATKRSG-AGVALLNDHIYVVGGFDGTA---HLSS 223 (301)
T ss_dssp CBSCEEEEET-TEEEEECCBCSSC-BCCCEEEEETTTTEEEEECCCSSCCBS-CEEEEETTEEEEECCBCSSS---BCCC
T ss_pred cccceEEEEC-CEEEEECCCCCCc-ccceEEEEeCCCCcEEeCCCCCccccc-ceEEEECCEEEEEeCCCCCc---ccce
Confidence 9999999998 8999999987654 679999999999999999999999987 78888999999999986542 4789
Q ss_pred EEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---------CceeEeceEEeeccCCCCc
Q 013264 287 AECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---------NGEVVKGKIVSSIVPLPKS 357 (446)
Q Consensus 287 v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---------~~~~~~W~~~~~~~~~p~~ 357 (446)
+++||+++++|++++ ++|.+|..++++++++ +|||+||.++. ++++++|+.+..+
T Consensus 224 v~~yd~~~~~W~~~~-----~~p~~r~~~~~~~~~~-----~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~------ 287 (301)
T 2vpj_A 224 VEAYNIRTDSWTTVT-----SMTTPRCYVGATVLRG-----RLYAIAGYDGNSLLSSIECYDPIIDSWEVVTSM------ 287 (301)
T ss_dssp EEEEETTTTEEEEEC-----CCSSCCBSCEEEEETT-----EEEEECCBCSSSBEEEEEEEETTTTEEEEEEEE------
T ss_pred EEEEeCCCCcEEECC-----CCCCcccceeEEEECC-----EEEEEcCcCCCcccccEEEEcCCCCeEEEcCCC------
Confidence 999999999999998 6889999999999987 99999998754 3455678877654
Q ss_pred CCCCCCCCeEEEee
Q 013264 358 VTEGSSSPCVSVTT 371 (446)
Q Consensus 358 ~~~~R~~~~~~~~~ 371 (446)
+.+|..+++++++
T Consensus 288 -~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 288 -GTQRCDAGVCVLR 300 (301)
T ss_dssp -EEEEESCEEEEEE
T ss_pred -CcccccceEEEeC
Confidence 3466778787765
No 15
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.98 E-value=3.4e-31 Score=280.05 Aligned_cols=242 Identities=12% Similarity=0.150 Sum_probs=185.6
Q ss_pred cEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc-C-----CccCccceEEEEE
Q 013264 142 TWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK-P-----MSVARSFFACAVV 215 (446)
Q Consensus 142 ~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~-~-----~p~~r~~~~~~~~ 215 (446)
+|...+..+ +|..+++++ .++.|||+||... ...+++++||+ .+++|+.++ + ||.+|..|+++++
T Consensus 378 ~~~~~~~~p---~rr~g~~~~-~~~~iyv~GG~~~---~~~~~v~~yd~--~~~~W~~~~~~~p~~~~p~~R~~hs~~~~ 448 (695)
T 2zwa_A 378 QLLECECPI---NRKFGDVDV-AGNDVFYMGGSNP---YRVNEILQLSI--HYDKIDMKNIEVSSSEVPVARMCHTFTTI 448 (695)
T ss_dssp EEEECCCTT---CCBSCEEEE-CSSCEEEECCBSS---SBCCCEEEEEE--CSSCEEEEECCCCCSCCCCCCBSCEEEEE
T ss_pred eEeccCCCC---CCceeEEEE-ECCEEEEECCCCC---CCcCcEEEEEC--CCCeEEEeccCCCCCCCCccccceEEEEE
Confidence 344444444 344444444 7999999999865 35789999999 899999998 5 8999999999999
Q ss_pred --CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeC
Q 013264 216 --GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDP 292 (446)
Q Consensus 216 --~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~ 292 (446)
+ ++|||+||.+.....++++++||+.+++|+.+++||.+|.. |+++++ +++|||+||.+... ++++||+
T Consensus 449 ~~~-~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~R~~-h~~~~~~~~~iyv~GG~~~~~------~v~~yd~ 520 (695)
T 2zwa_A 449 SRN-NQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHTRFR-HSACSLPDGNVLILGGVTEGP------AMLLYNV 520 (695)
T ss_dssp TTT-TEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBCCBS-CEEEECTTSCEEEECCBCSSC------SEEEEET
T ss_pred ccC-CEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCCccc-ceEEEEcCCEEEEECCCCCCC------CEEEEEC
Confidence 7 89999999987655689999999999999999999999998 777775 99999999986542 8999999
Q ss_pred CCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC-----------CceeEe------ceEEeeccCCC
Q 013264 293 KTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ-----------NGEVVK------GKIVSSIVPLP 355 (446)
Q Consensus 293 ~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~-----------~~~~~~------W~~~~~~~~~p 355 (446)
.+++|+.++.. .++|.+|.+|++++++. ..++|||+||.... ++++++ |+.+.. +|
T Consensus 521 ~t~~W~~~~~~--g~~p~~r~~~~a~v~~~--~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~---~p 593 (695)
T 2zwa_A 521 TEEIFKDVTPK--DEFFQNSLVSAGLEFDP--VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ---HP 593 (695)
T ss_dssp TTTEEEECCCS--SGGGGSCCBSCEEEEET--TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE---CG
T ss_pred CCCceEEccCC--CCCCCcccceeEEEEeC--CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC---CC
Confidence 99999999842 13788999999888772 01399999998432 234445 555543 32
Q ss_pred CcCCCCCCCCeEEEeeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeeecCCC
Q 013264 356 KSVTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHVHLPV 432 (446)
Q Consensus 356 ~~~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~~~p~ 432 (446)
..+|.++++++++ +++|||+||.+..+.. ....+ +++| |+++++|+.+++|.
T Consensus 594 ---~~~R~~~~~~~~~------~~~iyv~GG~~~~~~~------------~~~~~---v~~y-d~~t~~W~~~~~p~ 645 (695)
T 2zwa_A 594 ---LFQRYGSQIKYIT------PRKLLIVGGTSPSGLF------------DRTNS---IISL-DPLSETLTSIPISR 645 (695)
T ss_dssp ---GGCCBSCEEEEEE------TTEEEEECCBCSSCCC------------CTTTS---EEEE-ETTTTEEEECCCCH
T ss_pred ---CCCcccceEEEeC------CCEEEEECCccCCCCC------------CCCCe---EEEE-ECCCCeEEEeeccc
Confidence 4578889888887 5899999998655310 01122 3458 99999999766553
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=99.97 E-value=6.9e-30 Score=270.03 Aligned_cols=230 Identities=13% Similarity=0.163 Sum_probs=182.1
Q ss_pred ceeEEEEECCCCcEEecC-CCC---CCCCccceEEEEee--CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCC
Q 013264 130 QYGLTIFNASNGTWERIR-PHV---GRIPMFCQCVAVPA--SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPM 203 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~-~~~---~~~p~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~ 203 (446)
...+++||+.+++|..++ +++ .+.+|..|++++ + +++|||+||..... ...+++++||+ .+++|+.+++|
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~-~~~~~~lyv~GG~~~~~-~~~~dv~~yd~--~t~~W~~~~~~ 486 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTT-ISRNNQLLLIGGRKAPH-QGLSDNWIFDM--KTREWSMIKSL 486 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEE-ETTTTEEEEECCBSSTT-CBCCCCEEEET--TTTEEEECCCC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEE-EccCCEEEEEcCCCCCC-CccccEEEEeC--CCCcEEECCCC
Confidence 345889999999999998 632 126898888887 6 99999999986543 25789999999 88999999999
Q ss_pred ccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCC---CCccCCcceEEEEEC---CEEEEEeCCC
Q 013264 204 SVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPE---MDEERDECQGVCLEG---DRFFVVSGYG 276 (446)
Q Consensus 204 p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~---~~~~r~~~~~~~~~~---~~lyv~GG~~ 276 (446)
|.+|..|+++++ + ++|||+||.+... ++++||+.+++|+.+++ +|.+|.. +++++++ ++|||+||..
T Consensus 487 p~~R~~h~~~~~~~-~~iyv~GG~~~~~----~v~~yd~~t~~W~~~~~~g~~p~~r~~-~~a~v~~~~~~~iyv~GG~~ 560 (695)
T 2zwa_A 487 SHTRFRHSACSLPD-GNVLILGGVTEGP----AMLLYNVTEEIFKDVTPKDEFFQNSLV-SAGLEFDPVSKQGIILGGGF 560 (695)
T ss_dssp SBCCBSCEEEECTT-SCEEEECCBCSSC----SEEEEETTTTEEEECCCSSGGGGSCCB-SCEEEEETTTTEEEEECCBC
T ss_pred CCCcccceEEEEcC-CEEEEECCCCCCC----CEEEEECCCCceEEccCCCCCCCcccc-eeEEEEeCCCCEEEEECCcC
Confidence 999999999997 6 8999999987653 89999999999999986 8889987 6666656 8999999985
Q ss_pred CCCCCcccCcEEEEeCCCCc------eEEcccCCCCCCCCCCCceEEEEec-CCCcccEEEEEcCCCCC-----------
Q 013264 277 TESQGRFKPDAECYDPKTGS------WSKFDHVWPFPSLSPRGSTATITSY-RLQQHQWLWFLGKEQQQ----------- 338 (446)
Q Consensus 277 ~~~~~~~~~~v~~yd~~~~~------W~~~~~~~p~~~~~~r~~~~~~~~~-~~~~~~~lyv~GG~~~~----------- 338 (446)
... ....+++++||+.+++ |+.+... .+.+|.+|++++++ + +|||+||.+..
T Consensus 561 ~~~-~~~~~~v~~yd~~~~~w~~~~~W~~~~~~----p~~~R~~~~~~~~~~~-----~iyv~GG~~~~~~~~~~~~v~~ 630 (695)
T 2zwa_A 561 MDQ-TTVSDKAIIFKYDAENATEPITVIKKLQH----PLFQRYGSQIKYITPR-----KLLIVGGTSPSGLFDRTNSIIS 630 (695)
T ss_dssp TTS-SCBCCEEEEEEECTTCSSCCEEEEEEEEC----GGGCCBSCEEEEEETT-----EEEEECCBCSSCCCCTTTSEEE
T ss_pred CCC-CeeeCcEEEEEccCCccccceEEEEcCCC----CCCCcccceEEEeCCC-----EEEEECCccCCCCCCCCCeEEE
Confidence 432 2467899999999999 8888731 25889999999999 6 99999997532
Q ss_pred -CceeEeceEEeeccCCCCcC----CCCCCCCeEEEeeccccCCCceEEEEeccCC
Q 013264 339 -NGEVVKGKIVSSIVPLPKSV----TEGSSSPCVSVTTLHNSQQQQKVFVMTGNGG 389 (446)
Q Consensus 339 -~~~~~~W~~~~~~~~~p~~~----~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~ 389 (446)
++++++|+.+ ++|... ...+.+|++++++ +++|||+||...
T Consensus 631 yd~~t~~W~~~----~~p~~~~~~~~p~~~gh~~~~~~------~g~i~v~GGg~~ 676 (695)
T 2zwa_A 631 LDPLSETLTSI----PISRRIWEDHSLMLAGFSLVSTS------MGTIHIIGGGAT 676 (695)
T ss_dssp EETTTTEEEEC----CCCHHHHHHSCCCCSSCEEECC---------CEEEECCEEE
T ss_pred EECCCCeEEEe----eccccccCCCCccceeeeEEEeC------CCEEEEEeCCcc
Confidence 3455667733 444332 1145678888877 349999999743
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=1.3e-28 Score=259.45 Aligned_cols=263 Identities=15% Similarity=0.194 Sum_probs=183.8
Q ss_pred EEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCC----CccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 133 LTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITL----EPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 133 ~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~----~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
+.+|||.+++|..++++| +..+++++.. +++||++||...... ...+++++||+ .+++|+.++.|+.+|
T Consensus 168 ~~~~dp~~~~W~~~~~~P----~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~--~t~~w~~~~~~~~~~ 241 (656)
T 1k3i_A 168 YTAPQPGLGRWGPTIDLP----IVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDP--STGIVSDRTVTVTKH 241 (656)
T ss_dssp CCCCCTTSCEEEEEEECS----SCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECT--TTCCBCCCEEEECSC
T ss_pred cccCCCCCCeeeeeccCC----CCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeC--CCCcEEeCcccCCCC
Confidence 457899999999998876 3445555534 999999999754321 12457999999 899999999999888
Q ss_pred cceE--EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCccc
Q 013264 208 SFFA--CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFK 284 (446)
Q Consensus 208 ~~~~--~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~ 284 (446)
..++ ++++.+++||++||... .++++||+.+++|+++++|+.+|.. ++++++ +++|||+||..... ...
T Consensus 242 ~~~~~~~~~~~~g~lyv~GG~~~-----~~v~~yd~~t~~W~~~~~~~~~R~~-~s~~~~~dg~iyv~GG~~~~~--~~~ 313 (656)
T 1k3i_A 242 DMFCPGISMDGNGQIVVTGGNDA-----KKTSLYDSSSDSWIPGPDMQVARGY-QSSATMSDGRVFTIGGSWSGG--VFE 313 (656)
T ss_dssp CCSSCEEEECTTSCEEEECSSST-----TCEEEEEGGGTEEEECCCCSSCCSS-CEEEECTTSCEEEECCCCCSS--SCC
T ss_pred CCccccccCCCCCCEEEeCCCCC-----CceEEecCcCCceeECCCCCccccc-cceEEecCCeEEEEeCcccCC--ccc
Confidence 7664 44444589999999764 3799999999999999999999997 787887 99999999953221 257
Q ss_pred CcEEEEeCCCCceEEcccCCCCCCCCC-----------------------------------------------------
Q 013264 285 PDAECYDPKTGSWSKFDHVWPFPSLSP----------------------------------------------------- 311 (446)
Q Consensus 285 ~~v~~yd~~~~~W~~~~~~~p~~~~~~----------------------------------------------------- 311 (446)
+++++||+.+++|+.++.....+++..
T Consensus 314 ~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~ 393 (656)
T 1k3i_A 314 KNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRG 393 (656)
T ss_dssp CCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTE
T ss_pred ccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccc
Confidence 889999999999999742110122221
Q ss_pred ----CCceEEEE---ecCCCcccEEEEEcCCCCC---------------CceeEeceEEeeccCCCCcCCCCCCCCeEEE
Q 013264 312 ----RGSTATIT---SYRLQQHQWLWFLGKEQQQ---------------NGEVVKGKIVSSIVPLPKSVTEGSSSPCVSV 369 (446)
Q Consensus 312 ----r~~~~~~~---~~~~~~~~~lyv~GG~~~~---------------~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~~ 369 (446)
+..++++. .++ +|||+||.... +++++.|..+.. .+| +.+|..+++++
T Consensus 394 ~~~~~~~~~av~~~~~~~-----~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-~~m----p~~R~~~~~~~ 463 (656)
T 1k3i_A 394 VAPDAMCGNAVMYDAVKG-----KILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS-NGL----YFARTFHTSVV 463 (656)
T ss_dssp ECCCCBTCEEEEEETTTT-----EEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT-TCC----SSCCBSCEEEE
T ss_pred cCCCCCCCceEeccCCCC-----eEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc-CCC----CCCcccCCeEE
Confidence 22334443 244 99999996431 344566776641 133 45777888888
Q ss_pred eeccccCCCceEEEEeccCCCCCCCCCccccccccccCCcceEEEEEeccCCCcCeeeec-CCCCccccc
Q 013264 370 TTLHNSQQQQKVFVMTGNGGRGCSSSSALSSFICNECEGEGAFIMERDMSNGNIKWDHVH-LPVGFSGFP 438 (446)
Q Consensus 370 ~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~d~~~~~W~~~~-~p~~~~~~~ 438 (446)
+. +++|||+||....... + .. .....+++| |+++++|+.+. +|..+..+.
T Consensus 464 l~------~g~i~v~GG~~~~~~~-~---------~~--~~~~~v~~y-dp~t~~W~~~~~~~~~R~~hs 514 (656)
T 1k3i_A 464 LP------DGSTFITGGQRRGIPF-E---------DS--TPVFTPEIY-VPEQDTFYKQNPNSIVRVYHS 514 (656)
T ss_dssp CT------TSCEEEECCBSBCCTT-C---------CC--SBCCCCEEE-EGGGTEEEECCCCSSCCCTTE
T ss_pred CC------CCCEEEECCcccCcCc-C---------CC--CcccceEEE-cCCCCceeecCCCCCcccccc
Confidence 73 3999999997532100 0 00 112234558 99999999654 555555554
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.95 E-value=2.3e-27 Score=250.04 Aligned_cols=230 Identities=17% Similarity=0.192 Sum_probs=171.0
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+++||+.+++|..++.++.+..++++++++..+++||++||... .++++||+ .+++|.++++|+.+|..|
T Consensus 219 ~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~------~~v~~yd~--~t~~W~~~~~~~~~R~~~ 290 (656)
T 1k3i_A 219 TLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA------KKTSLYDS--SSDSWIPGPDMQVARGYQ 290 (656)
T ss_dssp EEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST------TCEEEEEG--GGTEEEECCCCSSCCSSC
T ss_pred EEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC------CceEEecC--cCCceeECCCCCcccccc
Confidence 3688999999999999988742223344455557899999999753 27999999 899999999999999999
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEec-----CCCCccCC----------------------------
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRML-----PEMDEERD---------------------------- 257 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-----~~~~~~r~---------------------------- 257 (446)
+++++.|++|||+||.......++++|+||+.+++|+.+ .+|+..+.
T Consensus 291 s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~ 370 (656)
T 1k3i_A 291 SSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTA 370 (656)
T ss_dssp EEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSE
T ss_pred ceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccc
Confidence 999993389999999544334678999999999999997 33332211
Q ss_pred ----------------------------cceEEEE---ECCEEEEEeCCCCCCCCcccC---cEEEEeCCCCceEEcccC
Q 013264 258 ----------------------------ECQGVCL---EGDRFFVVSGYGTESQGRFKP---DAECYDPKTGSWSKFDHV 303 (446)
Q Consensus 258 ----------------------------~~~~~~~---~~~~lyv~GG~~~~~~~~~~~---~v~~yd~~~~~W~~~~~~ 303 (446)
.++++++ .+++||++||..........+ .+++||+.+++|.++..
T Consensus 371 v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~- 449 (656)
T 1k3i_A 371 MNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFAS- 449 (656)
T ss_dssp EEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECT-
T ss_pred eeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEcc-
Confidence 0123332 489999999975322122344 78999999999998861
Q ss_pred CCCCCCCCCCceEEEEecCCCcccEEEEEcCCCC----------C-----CceeEeceEEeeccCCCCcCCCCCCCCeEE
Q 013264 304 WPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ----------Q-----NGEVVKGKIVSSIVPLPKSVTEGSSSPCVS 368 (446)
Q Consensus 304 ~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~----------~-----~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~ 368 (446)
.+||.+|..|+++++.+ ++|||+||.+. . ++++++|+.+. ++ ..+|..|+++
T Consensus 450 --~~mp~~R~~~~~~~l~~----g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~---~~----~~~R~~hs~a 516 (656)
T 1k3i_A 450 --NGLYFARTFHTSVVLPD----GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQN---PN----SIVRVYHSIS 516 (656)
T ss_dssp --TCCSSCCBSCEEEECTT----SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECC---CC----SSCCCTTEEE
T ss_pred --CCCCCCcccCCeEECCC----CCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecC---CC----CCccccccHh
Confidence 16889999999888833 39999999652 1 34556676654 33 4577888777
Q ss_pred Ee--eccccCCCceEEEEeccCC
Q 013264 369 VT--TLHNSQQQQKVFVMTGNGG 389 (446)
Q Consensus 369 ~~--~~~~~~~~~~l~v~GG~~~ 389 (446)
++ + ++|||+||...
T Consensus 517 ~ll~d-------g~v~v~GG~~~ 532 (656)
T 1k3i_A 517 LLLPD-------GRVFNGGGGLC 532 (656)
T ss_dssp EECTT-------SCEEEEECCCC
T ss_pred hcCCC-------cEEEecCCCCC
Confidence 66 5 89999999643
No 19
>1fs1_A SKP2 F-BOX, cyclin A/CDK2-associated P19; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.158.1.1 PDB: 1ldk_E
Probab=98.96 E-value=1.7e-10 Score=78.66 Aligned_cols=46 Identities=24% Similarity=0.400 Sum_probs=39.6
Q ss_pred ccCCCCCChHHHHHHHhcccCccchhhHHhcccchhhhcCChHHHH
Q 013264 13 VQNLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYR 58 (446)
Q Consensus 13 ~~~~~~~LPddl~~~iLarlP~~~~~~~r~VcK~w~~li~s~~f~~ 58 (446)
....|..||+||+.+||++||..++.++++|||+|+.++.++.|++
T Consensus 5 ~~~~~~~LP~eil~~I~~~L~~~dl~~~~~Vck~w~~~~~~~~lW~ 50 (53)
T 1fs1_A 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQ 50 (53)
T ss_dssp ----CCSSCHHHHHHHHTTSCGGGHHHHHTTCHHHHHHHTCGGGC-
T ss_pred CCCCHHHCCHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCChHHHH
Confidence 3567899999999999999999999999999999999999988764
No 20
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.79 E-value=3e-07 Score=91.25 Aligned_cols=48 Identities=25% Similarity=0.394 Sum_probs=43.4
Q ss_pred cCCCCCChHHHHHHHhcccCccchhhHHhcccchhhhcCChHHHHHHH
Q 013264 14 QNLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYRERI 61 (446)
Q Consensus 14 ~~~~~~LPddl~~~iLarlP~~~~~~~r~VcK~w~~li~s~~f~~~r~ 61 (446)
...+..||+||+.+||++|+..++.++.+|||+|+.++.++.+++...
T Consensus 16 ~d~~~~lp~e~~~~i~~~l~~~~l~~~~~v~~~~~~~~~~~~~w~~~~ 63 (445)
T 2ovr_B 16 RDFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWREKC 63 (445)
T ss_dssp CSTTTSSCHHHHHHHHTTSCHHHHHHHTTSCHHHHHHHTCSHHHHHHH
T ss_pred CChhHHCCHHHHHHHHHhCCHHHHHHHHHHhHHHHhhcCchhHhhhhe
Confidence 346889999999999999999999999999999999999998887543
No 21
>2e31_A FBS1, F-box only protein 2; ubiquitin, SCF, ubiquitin ligase, FBS1; 2.40A {Mus musculus} PDB: 2e32_A
Probab=98.73 E-value=4.4e-09 Score=97.40 Aligned_cols=51 Identities=18% Similarity=0.421 Sum_probs=46.4
Q ss_pred cCCCCCChHHHHHHHhcccCccchh-hHHhcccchhhhcCChHHHHHHHHcC
Q 013264 14 QNLIPGLPDEIAMECLIRVPYKFHN-DLKSVCQRWLNLISSHSFYRERIRSG 64 (446)
Q Consensus 14 ~~~~~~LPddl~~~iLarlP~~~~~-~~r~VcK~w~~li~s~~f~~~r~~~~ 64 (446)
...+..||+||+++||+|||..+|. ++++|||+|++|++++.|++.+.+..
T Consensus 48 ~~~~~~LP~ell~~Il~~Lp~~~L~~r~~~VCk~Wr~l~~~~~~w~~~~~~~ 99 (297)
T 2e31_A 48 VEYLAELPEPLLLRVLAELPATELVQACRLVCLRWKELVDGAPLWLLKCQQE 99 (297)
T ss_dssp CCCTTSSCHHHHHHHHHTSCHHHHHHTGGGTCHHHHHHHTSHHHHHHHHHHT
T ss_pred ccChhhCCHHHHHHHHHcCCHHHHHHHHHHHhHHHHHHhcChHHHHHHhhcc
Confidence 4678899999999999999999999 99999999999999999988765543
No 22
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.61 E-value=1.8e-05 Score=78.61 Aligned_cols=46 Identities=24% Similarity=0.425 Sum_probs=40.9
Q ss_pred CCCCCChHHHHHHHhcccCccchhhHHhcccchhhhcCC-hHHHHHH
Q 013264 15 NLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISS-HSFYRER 60 (446)
Q Consensus 15 ~~~~~LPddl~~~iLarlP~~~~~~~r~VcK~w~~li~s-~~f~~~r 60 (446)
..+..||+||+++||++||..++.+++.|||+|+.++.+ +.+++..
T Consensus 13 d~~~~lp~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~~w~~~ 59 (464)
T 3v7d_B 13 DLITSLPFEISLKIFNYLQFEDIINSLGVSQNWNKIIRKSTSLWKKL 59 (464)
T ss_dssp CHHHHSCHHHHHHHHTTSCHHHHHHHHTTCHHHHHHHTTCHHHHHHH
T ss_pred CChHHCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 346789999999999999999999999999999999998 7776553
No 23
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.59 E-value=3e-06 Score=83.78 Aligned_cols=44 Identities=25% Similarity=0.444 Sum_probs=39.7
Q ss_pred CCCCChHH----HHHHHhcccCccchhhHHhcccchhhhcCChHHHHH
Q 013264 16 LIPGLPDE----IAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYRE 59 (446)
Q Consensus 16 ~~~~LPdd----l~~~iLarlP~~~~~~~r~VcK~w~~li~s~~f~~~ 59 (446)
.+..||+| |+++||++|+..++.++.+|||+|+.++.++.+++.
T Consensus 10 ~~~~lp~e~~~~~~~~i~~~l~~~~l~~~~~v~~~w~~~~~~~~~w~~ 57 (435)
T 1p22_A 10 FITALPARGLDHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKK 57 (435)
T ss_dssp HHHHTGGGTCHHHHHHHHTTCCHHHHHHHHHHCHHHHHHHHHTTHHHH
T ss_pred hHHHCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcChHHHHH
Confidence 45679999 999999999999999999999999999988877654
No 24
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.57 E-value=0.019 Score=51.56 Aligned_cols=172 Identities=12% Similarity=0.110 Sum_probs=104.6
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+..+|+.+++=..--.++. ..+....+. .+++||+.... .+.+++||+ .+.+ .+...+.+..+.
T Consensus 43 S~v~~vD~~tgkv~~~~~l~~--~~fgeGi~~-~~~~ly~ltw~-------~~~v~v~D~--~tl~--~~~ti~~~~~Gw 108 (243)
T 3mbr_X 43 SSVRKVDLETGRILQRAEVPP--PYFGAGIVA-WRDRLIQLTWR-------NHEGFVYDL--ATLT--PRARFRYPGEGW 108 (243)
T ss_dssp CEEEEEETTTCCEEEEEECCT--TCCEEEEEE-ETTEEEEEESS-------SSEEEEEET--TTTE--EEEEEECSSCCC
T ss_pred ceEEEEECCCCCEEEEEeCCC--CcceeEEEE-eCCEEEEEEee-------CCEEEEEEC--CcCc--EEEEEeCCCCce
Confidence 368899999998766555552 233444444 79999999653 457999999 4443 444444445667
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEe---cCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRM---LPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~---~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v 287 (446)
+++.-+ +++|+.-| .+.+.++|+.|.+=.. +...+.+...-..+...+++||+--- ..+.|
T Consensus 109 glt~dg-~~L~vSdg-------s~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw--------~s~~I 172 (243)
T 3mbr_X 109 ALTSDD-SHLYMSDG-------TAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWVNGELLANVW--------LTSRI 172 (243)
T ss_dssp EEEECS-SCEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET--------TTTEE
T ss_pred EEeeCC-CEEEEECC-------CCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEeCCEEEEEEC--------CCCeE
Confidence 777655 78888744 2678999999875432 22223332221244566899997542 24589
Q ss_pred EEEeCCCCc---eEEcccCCCCCC----CCCCCceEEEEecCCCcccEEEEEcCC
Q 013264 288 ECYDPKTGS---WSKFDHVWPFPS----LSPRGSTATITSYRLQQHQWLWFLGKE 335 (446)
Q Consensus 288 ~~yd~~~~~---W~~~~~~~p~~~----~~~r~~~~~~~~~~~~~~~~lyv~GG~ 335 (446)
.+.|+++++ |-.+..+.+... +..-...+.|...+ .++|||.|-.
T Consensus 173 ~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~---~~~lfVTGK~ 224 (243)
T 3mbr_X 173 ARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE---HDRLFVTGKR 224 (243)
T ss_dssp EEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT---TTEEEEEETT
T ss_pred EEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC---CCEEEEECCC
Confidence 999999985 555554322210 11112234444332 3589998875
No 25
>3l2o_B F-box only protein 4; small G protein fold, UBL conjugation pathway, ubiquitin Pro ligase, protein binding-cell cycle complex; 2.80A {Homo sapiens}
Probab=97.40 E-value=7.4e-05 Score=68.43 Aligned_cols=49 Identities=14% Similarity=0.164 Sum_probs=44.0
Q ss_pred CCCCChHHHHHHHhcccCccchhhHHhcccchhhhcCChHHHHHHHHcC
Q 013264 16 LIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHSFYRERIRSG 64 (446)
Q Consensus 16 ~~~~LPddl~~~iLarlP~~~~~~~r~VcK~w~~li~s~~f~~~r~~~~ 64 (446)
.|..||+||++.||+.|+..++.++.+|||+||.+.+++.+++......
T Consensus 4 ~l~~LP~ei~l~IlsfL~p~DL~~l~~vcr~Wr~la~D~~LWr~~l~rd 52 (312)
T 3l2o_B 4 TLTRLPIDVQLYILSFLSPHDLCQLGSTNHYWNETVRDPILWRYFLLRD 52 (312)
T ss_dssp HHHHSCHHHHHHHHHTSCHHHHHHHHTTCHHHHHHHTCHHHHHHHHHSS
T ss_pred hhHhCCHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccchHHHHHHhcc
Confidence 3557999999999999999999999999999999999999987766554
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.24 E-value=0.075 Score=47.60 Aligned_cols=115 Identities=12% Similarity=0.048 Sum_probs=80.0
Q ss_pred cceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 156 FCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 156 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
+.+.... .++.||+-.|..+ .+.+.++|+ .+.+=..--+++..-...+++..+ ++||+.... .+.
T Consensus 22 ftqGL~~-~~~~LyestG~~g-----~S~v~~vD~--~tgkv~~~~~l~~~~fgeGi~~~~-~~ly~ltw~------~~~ 86 (243)
T 3mbr_X 22 FTEGLFY-LRGHLYESTGETG-----RSSVRKVDL--ETGRILQRAEVPPPYFGAGIVAWR-DRLIQLTWR------NHE 86 (243)
T ss_dssp CEEEEEE-ETTEEEEEECCTT-----SCEEEEEET--TTCCEEEEEECCTTCCEEEEEEET-TEEEEEESS------SSE
T ss_pred ccccEEE-ECCEEEEECCCCC-----CceEEEEEC--CCCCEEEEEeCCCCcceeEEEEeC-CEEEEEEee------CCE
Confidence 3455554 6899999998754 357999999 778765555555554556677777 799998543 278
Q ss_pred EEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 236 AEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 236 ~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
+.+||+.|.+=.. ..+.+..+ .+++..+++||+.-| .+.+..+|+++.+=
T Consensus 87 v~v~D~~tl~~~~--ti~~~~~G-wglt~dg~~L~vSdg---------s~~l~~iDp~t~~~ 136 (243)
T 3mbr_X 87 GFVYDLATLTPRA--RFRYPGEG-WALTSDDSHLYMSDG---------TAVIRKLDPDTLQQ 136 (243)
T ss_dssp EEEEETTTTEEEE--EEECSSCC-CEEEECSSCEEEECS---------SSEEEEECTTTCCE
T ss_pred EEEEECCcCcEEE--EEeCCCCc-eEEeeCCCEEEEECC---------CCeEEEEeCCCCeE
Confidence 9999988765432 22333333 566766778999765 23799999999753
No 27
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=97.14 E-value=8.4e-05 Score=70.60 Aligned_cols=43 Identities=26% Similarity=0.369 Sum_probs=38.3
Q ss_pred ccCCCCCChHHHHHHHhcccCccchhhHHhcccchhhhcCChH
Q 013264 13 VQNLIPGLPDEIAMECLIRVPYKFHNDLKSVCQRWLNLISSHS 55 (446)
Q Consensus 13 ~~~~~~~LPddl~~~iLarlP~~~~~~~r~VcK~w~~li~s~~ 55 (446)
+...|..||+|++.+||.+|+..++.+++.|||+|+.++.++.
T Consensus 5 ~~~~~~~LP~eil~~If~~L~~~d~~~~~~vc~~W~~~~~~~~ 47 (336)
T 2ast_B 5 PGVSWDSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDES 47 (336)
T ss_dssp --CCSSSSCHHHHHHHHTTSCHHHHHHTTSSCHHHHHHHTCST
T ss_pred ccCChhhCCHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCch
Confidence 4567899999999999999999999999999999999987664
No 28
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.07 E-value=0.061 Score=48.68 Aligned_cols=172 Identities=12% Similarity=0.035 Sum_probs=99.6
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+..+|+.+++=..--+++. ..+....+. .+++||+.... .+.+++||+ .+.+ .+...+.+-.+.
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~--~~FgeGit~-~g~~ly~ltw~-------~~~v~v~D~--~t~~--~~~ti~~~~eG~ 130 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGK--RYFGEGISD-WKDKIVGLTWK-------NGLGFVWNI--RNLR--QVRSFNYDGEGW 130 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCT--TCCEEEEEE-ETTEEEEEESS-------SSEEEEEET--TTCC--EEEEEECSSCCC
T ss_pred ceEEEEECCCCcEEEEEecCC--ccceeEEEE-eCCEEEEEEee-------CCEEEEEEC--ccCc--EEEEEECCCCce
Confidence 367899999998665444441 223344444 79999999653 457999999 5544 333333344556
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEec-C--CCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRML-P--EMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~--~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v 287 (446)
+++.-+ +++|+.-| .+.+..+|+.|.+=..- + .-..+...-..+...+++||+--- ..+.|
T Consensus 131 glt~dg-~~L~~SdG-------s~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~~G~lyan~w--------~~~~I 194 (262)
T 3nol_A 131 GLTHND-QYLIMSDG-------TPVLRFLDPESLTPVRTITVTAHGEELPELNELEWVDGEIFANVW--------QTNKI 194 (262)
T ss_dssp CEEECS-SCEEECCS-------SSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEETTEEEEEET--------TSSEE
T ss_pred EEecCC-CEEEEECC-------CCeEEEEcCCCCeEEEEEEeccCCccccccceeEEECCEEEEEEc--------cCCeE
Confidence 666555 67888643 26799999998764322 1 111222110124455899997532 24589
Q ss_pred EEEeCCCCc---eEEcccCCCCC---CCCCCCceEEEEecCCCcccEEEEEcCC
Q 013264 288 ECYDPKTGS---WSKFDHVWPFP---SLSPRGSTATITSYRLQQHQWLWFLGKE 335 (446)
Q Consensus 288 ~~yd~~~~~---W~~~~~~~p~~---~~~~r~~~~~~~~~~~~~~~~lyv~GG~ 335 (446)
.+.|+++++ |-.++.+.+.. .+..-.-.+.|...+ .++|||.|-.
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~---~~~lfVTGK~ 245 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKE---HHRLFVTGKL 245 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETT---TTEEEEEETT
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCC---CCEEEEECCC
Confidence 999999986 44444221110 011112344444432 3589998865
No 29
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.91 E-value=0.12 Score=46.95 Aligned_cols=113 Identities=12% Similarity=0.102 Sum_probs=72.3
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
+.....-++.||+..|..+ .+.+.++|+ .+.+=...-+++......+++..+ ++||+..-. .+.+.
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~-----~s~v~~iD~--~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~------~~~v~ 89 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG-----RSSVRQVAL--QTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWL------KNIGF 89 (266)
T ss_dssp EEEEECSTTEEEEEECSTT-----TCEEEEEET--TTCCEEEEEECCTTCCEEEEEEET-TEEEEEETT------CSEEE
T ss_pred ccEEEeCCCeEEEECCCCC-----CCEEEEEEC--CCCCEEEEEecCCCcceEEEEEeC-CEEEEEEec------CCEEE
Confidence 5555543489999887432 457999999 777754433333322334566666 799998542 26899
Q ss_pred EEECCCCcEEecCCCCcc-CCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 238 VYDVEADEWRMLPEMDEE-RDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~-r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+||+.|.+= +..++.+ ..+ .+++..++++|+.-| .+.+..+|+++.+
T Consensus 90 viD~~t~~v--~~~i~~g~~~g-~glt~Dg~~l~vs~g---------s~~l~viD~~t~~ 137 (266)
T 2iwa_A 90 IYDRRTLSN--IKNFTHQMKDG-WGLATDGKILYGSDG---------TSILYEIDPHTFK 137 (266)
T ss_dssp EEETTTTEE--EEEEECCSSSC-CEEEECSSSEEEECS---------SSEEEEECTTTCC
T ss_pred EEECCCCcE--EEEEECCCCCe-EEEEECCCEEEEECC---------CCeEEEEECCCCc
Confidence 999987643 2222222 222 456666778998754 2479999999865
No 30
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.88 E-value=0.076 Score=49.80 Aligned_cols=143 Identities=10% Similarity=0.010 Sum_probs=86.3
Q ss_pred eeEEEEECCCCcEEecCCC---CCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcE-EEccCCccC
Q 013264 131 YGLTIFNASNGTWERIRPH---VGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRW-RRVKPMSVA 206 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~---~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W-~~~~~~p~~ 206 (446)
-.+..||+.+++...--.. ...+....+..++ .++++|+.... .+.+.++|+ .+.+- ..++....
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~-~~~~lyv~~~~-------~~~v~viD~--~t~~~~~~i~~~~~- 85 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVI-RDGIGWIVVNN-------SHVIFAIDI--NTFKEVGRITGFTS- 85 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEE-ETTEEEEEEGG-------GTEEEEEET--TTCCEEEEEECCSS-
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccceEEEE-ECCEEEEEEcC-------CCEEEEEEC--cccEEEEEcCCCCC-
Confidence 3588999999988652100 1012233344544 79999998652 457999999 66665 33433222
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCc---cCCcceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDE---ERDECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~---~r~~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
...+++..++++||.... ...+.++|+.+++-...-+... ......++++.+++||+..-. .
T Consensus 86 --p~~i~~~~~g~lyv~~~~------~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~-------~ 150 (328)
T 3dsm_A 86 --PRYIHFLSDEKAYVTQIW------DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWS-------Y 150 (328)
T ss_dssp --EEEEEEEETTEEEEEEBS------CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECT-------T
T ss_pred --CcEEEEeCCCeEEEEECC------CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCC-------C
Confidence 234444234799998743 2688999999987542211111 000113455578999998521 1
Q ss_pred cCcEEEEeCCCCceEE
Q 013264 284 KPDAECYDPKTGSWSK 299 (446)
Q Consensus 284 ~~~v~~yd~~~~~W~~ 299 (446)
.+.+.++|+++++...
T Consensus 151 ~~~v~viD~~t~~~~~ 166 (328)
T 3dsm_A 151 QNRILKIDTETDKVVD 166 (328)
T ss_dssp CCEEEEEETTTTEEEE
T ss_pred CCEEEEEECCCCeEEE
Confidence 2479999999987654
No 31
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=96.55 E-value=0.0006 Score=70.00 Aligned_cols=38 Identities=18% Similarity=0.450 Sum_probs=29.4
Q ss_pred ccCCCCCChHHHHHHHhcccC-ccchhhHHhcccchhhh
Q 013264 13 VQNLIPGLPDEIAMECLIRVP-YKFHNDLKSVCQRWLNL 50 (446)
Q Consensus 13 ~~~~~~~LPddl~~~iLarlP-~~~~~~~r~VcK~w~~l 50 (446)
....|..|||||+.+||.+|| ..+..+++.|||+|+.+
T Consensus 2 ~~d~~~~LPdevL~~If~~L~~~~d~~~~s~vck~W~~~ 40 (594)
T 2p1m_B 2 QKRIALSFPEEVLEHVFSFIQLDKDRNSVSLVCKSWYEI 40 (594)
T ss_dssp --------CHHHHHHHHHTCCCHHHHHHHHTSCHHHHHH
T ss_pred cccchhhCCHHHHHHHHhhcCCchhHHHHHHHHHHHHHh
Confidence 346789999999999999999 99999999999999988
No 32
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=96.34 E-value=0.45 Score=44.41 Aligned_cols=171 Identities=12% Similarity=0.043 Sum_probs=93.6
Q ss_pred eEEEEECCCCcEE-ecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC----
Q 013264 132 GLTIFNASNGTWE-RIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA---- 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~-~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~---- 206 (446)
.+.++|+.+.+-. .++... .| +..++..+++||+.... .+.+.++|+ .+.+-...-+....
T Consensus 65 ~v~viD~~t~~~~~~i~~~~--~p---~~i~~~~~g~lyv~~~~-------~~~v~~iD~--~t~~~~~~i~~g~~~~~~ 130 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRITGFT--SP---RYIHFLSDEKAYVTQIW-------DYRIFIINP--KTYEITGYIECPDMDMES 130 (328)
T ss_dssp EEEEEETTTCCEEEEEECCS--SE---EEEEEEETTEEEEEEBS-------CSEEEEEET--TTTEEEEEEECTTCCTTT
T ss_pred EEEEEECcccEEEEEcCCCC--CC---cEEEEeCCCeEEEEECC-------CCeEEEEEC--CCCeEEEEEEcCCccccC
Confidence 5788999988763 343222 12 33444367899998643 347999999 66664321111110
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCC-CccCCcceEEEE-ECCEEEEEeCCCCCCC--Cc
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEM-DEERDECQGVCL-EGDRFFVVSGYGTESQ--GR 282 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~r~~~~~~~~-~~~~lyv~GG~~~~~~--~~ 282 (446)
.....++..+ +++||..-. ..+.+.++|+.+++....-+. ..+ ..+++ -++++|+......... ..
T Consensus 131 ~~p~~i~~~~-~~lyv~~~~-----~~~~v~viD~~t~~~~~~i~~g~~p----~~i~~~~dG~l~v~~~~~~~~~~~~~ 200 (328)
T 3dsm_A 131 GSTEQMVQYG-KYVYVNCWS-----YQNRILKIDTETDKVVDELTIGIQP----TSLVMDKYNKMWTITDGGYEGSPYGY 200 (328)
T ss_dssp CBCCCEEEET-TEEEEEECT-----TCCEEEEEETTTTEEEEEEECSSCB----CCCEECTTSEEEEEBCCBCTTCSSCB
T ss_pred CCcceEEEEC-CEEEEEcCC-----CCCEEEEEECCCCeEEEEEEcCCCc----cceEEcCCCCEEEEECCCccCCcccc
Confidence 0223344445 899998520 126899999999876533221 112 12233 3578888754221100 00
Q ss_pred ccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcC
Q 013264 283 FKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGK 334 (446)
Q Consensus 283 ~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG 334 (446)
....+.++|+++++....- ..+......+.+...+ .+.||+..+
T Consensus 201 ~~~~v~~id~~t~~v~~~~-----~~~~g~~p~~la~~~d---~~~lyv~~~ 244 (328)
T 3dsm_A 201 EAPSLYRIDAETFTVEKQF-----KFKLGDWPSEVQLNGT---RDTLYWINN 244 (328)
T ss_dssp CCCEEEEEETTTTEEEEEE-----ECCTTCCCEEEEECTT---SCEEEEESS
T ss_pred CCceEEEEECCCCeEEEEE-----ecCCCCCceeEEEecC---CCEEEEEcc
Confidence 1358999999998765322 1222222334444421 158898765
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.24 E-value=0.27 Score=44.67 Aligned_cols=174 Identities=10% Similarity=0.009 Sum_probs=97.0
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-ccc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-RSF 209 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-r~~ 209 (446)
..+..+|+.+++=..--+++. ..+....+. .++.||+..-. .+.+++||+ .+.+ .+...+.+ ...
T Consensus 44 s~v~~iD~~tg~v~~~i~l~~--~~fgeGi~~-~g~~lyv~t~~-------~~~v~viD~--~t~~--v~~~i~~g~~~g 109 (266)
T 2iwa_A 44 SSVRQVALQTGKVENIHKMDD--SYFGEGLTL-LNEKLYQVVWL-------KNIGFIYDR--RTLS--NIKNFTHQMKDG 109 (266)
T ss_dssp CEEEEEETTTCCEEEEEECCT--TCCEEEEEE-ETTEEEEEETT-------CSEEEEEET--TTTE--EEEEEECCSSSC
T ss_pred CEEEEEECCCCCEEEEEecCC--CcceEEEEE-eCCEEEEEEec-------CCEEEEEEC--CCCc--EEEEEECCCCCe
Confidence 468899999988655433331 223333343 68899999642 457999999 5443 33333332 234
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEe-c--CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCc
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRM-L--PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-~--~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
.+++.-+ +++|+.-| .+.+.++|+.+.+=.. + ...+.+...-..+...+++||+--.. .+.
T Consensus 110 ~glt~Dg-~~l~vs~g-------s~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg~lyvn~~~--------~~~ 173 (266)
T 2iwa_A 110 WGLATDG-KILYGSDG-------TSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYINGEVWANIWQ--------TDC 173 (266)
T ss_dssp CEEEECS-SSEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEETT--------SSE
T ss_pred EEEEECC-CEEEEECC-------CCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECCEEEEecCC--------CCe
Confidence 4544434 78998643 2689999998875332 2 11122221112444558899986432 458
Q ss_pred EEEEeCCCCc---eEEcccCCC----CCCCCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 287 AECYDPKTGS---WSKFDHVWP----FPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 287 v~~yd~~~~~---W~~~~~~~p----~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
|.+.|+++++ |..++...+ ...+..-.-.+.+...+ .+++||.|+...
T Consensus 174 V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~---~~~lfVTgk~~~ 228 (266)
T 2iwa_A 174 IARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE---NKRIFVTGKLWP 228 (266)
T ss_dssp EEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT---TTEEEEEETTCS
T ss_pred EEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC---CCEEEEECCCCC
Confidence 9999999985 333321000 00011112244444422 258999998654
No 34
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.19 E-value=0.1 Score=47.29 Aligned_cols=114 Identities=8% Similarity=0.002 Sum_probs=76.1
Q ss_pred ceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeE
Q 013264 157 CQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 157 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~ 236 (446)
.+.... .++.||+..|..+ .+.+.++|+ .+.+=..--+++..-...+++..+ ++||+.... .+.+
T Consensus 45 tqGL~~-~~~~LyestG~~g-----~S~v~~vD~--~Tgkv~~~~~l~~~~FgeGit~~g-~~ly~ltw~------~~~v 109 (262)
T 3nol_A 45 TEGFFY-RNGYFYESTGLNG-----RSSIRKVDI--ESGKTLQQIELGKRYFGEGISDWK-DKIVGLTWK------NGLG 109 (262)
T ss_dssp EEEEEE-ETTEEEEEEEETT-----EEEEEEECT--TTCCEEEEEECCTTCCEEEEEEET-TEEEEEESS------SSEE
T ss_pred cceEEE-ECCEEEEECCCCC-----CceEEEEEC--CCCcEEEEEecCCccceeEEEEeC-CEEEEEEee------CCEE
Confidence 355555 5899999998654 357899999 777754443444333344567777 799999543 2689
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
.+||+.|.+=.. ..+.+-.+ .+++..++.||+.-| .+.++.+|+++.+=
T Consensus 110 ~v~D~~t~~~~~--ti~~~~eG-~glt~dg~~L~~SdG---------s~~i~~iDp~T~~v 158 (262)
T 3nol_A 110 FVWNIRNLRQVR--SFNYDGEG-WGLTHNDQYLIMSDG---------TPVLRFLDPESLTP 158 (262)
T ss_dssp EEEETTTCCEEE--EEECSSCC-CCEEECSSCEEECCS---------SSEEEEECTTTCSE
T ss_pred EEEECccCcEEE--EEECCCCc-eEEecCCCEEEEECC---------CCeEEEEcCCCCeE
Confidence 999998876442 22222233 566666778888754 23799999998753
No 35
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.97 E-value=0.79 Score=42.78 Aligned_cols=173 Identities=10% Similarity=0.130 Sum_probs=88.5
Q ss_pred CCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcE
Q 013264 140 NGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAST 219 (446)
Q Consensus 140 ~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~ 219 (446)
-++|+.+..... .|-....+++.-++.+|+.|.. + .+++-+- .-.+|+++.... +...++++...++.
T Consensus 108 G~tW~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~-g-------~v~~S~D--gG~tW~~~~~~~-~~~~~~~~~~~~~~ 175 (327)
T 2xbg_A 108 GQSWSQIPLDPK-LPGSPRLIKALGNGSAEMITNV-G-------AIYRTKD--SGKNWQALVQEA-IGVMRNLNRSPSGE 175 (327)
T ss_dssp TSSCEECCCCTT-CSSCEEEEEEEETTEEEEEETT-C-------CEEEESS--TTSSEEEEECSC-CCCEEEEEECTTSC
T ss_pred CCCceECccccC-CCCCeEEEEEECCCCEEEEeCC-c-------cEEEEcC--CCCCCEEeecCC-CcceEEEEEcCCCc
Confidence 357998765421 2222233444357888887742 1 2555443 457899886432 23344555554567
Q ss_pred EEEEeccCCCCCCCCeEEEE-ECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCC-CCc
Q 013264 220 VCVAGGHDGQKNALKSAEVY-DVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPK-TGS 296 (446)
Q Consensus 220 iyv~GG~~~~~~~~~~~~~y-d~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~-~~~ 296 (446)
+|++|.. ..+++- |..-.+|+.+... ..... ..+++ -++.+|+.+... .++..+.. -.+
T Consensus 176 ~~~~g~~-------G~~~~S~d~gG~tW~~~~~~-~~~~~-~~~~~~~~g~~~~~~~~G---------~~~~s~~D~G~t 237 (327)
T 2xbg_A 176 YVAVSSR-------GSFYSTWEPGQTAWEPHNRT-TSRRL-HNMGFTPDGRLWMIVNGG---------KIAFSDPDNSEN 237 (327)
T ss_dssp EEEEETT-------SSEEEEECTTCSSCEEEECC-SSSCE-EEEEECTTSCEEEEETTT---------EEEEEETTEEEE
T ss_pred EEEEECC-------CcEEEEeCCCCCceeECCCC-CCCcc-ceeEECCCCCEEEEeCCc---------eEEEecCCCCCe
Confidence 7766532 123333 3335789988532 22332 34443 356888776421 34444333 458
Q ss_pred eEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC---CceeEeceEEe
Q 013264 297 WSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ---NGEVVKGKIVS 349 (446)
Q Consensus 297 W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~---~~~~~~W~~~~ 349 (446)
|+.+... +++........+...+ +.+|+.|+.... ...-.+|+.+.
T Consensus 238 W~~~~~~---~~~~~~~~~~v~~~~~----~~~~~~g~~g~i~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 238 WGELLSP---LRRNSVGFLDLAYRTP----NEVWLAGGAGALLCSQDGGQTWQQDV 286 (327)
T ss_dssp ECCCBCT---TSSCCSCEEEEEESSS----SCEEEEESTTCEEEESSTTSSCEECG
T ss_pred eEeccCC---cccCCcceEEEEecCC----CEEEEEeCCCeEEEeCCCCcccEEcC
Confidence 9887631 1223223344433333 478888764322 11234677664
No 36
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.83 E-value=0.99 Score=40.55 Aligned_cols=138 Identities=5% Similarity=0.024 Sum_probs=78.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc-cCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS-VARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p-~~r~~~ 210 (446)
.+..||+. ++......... ....++.++..++.+|+.... ...+++||+ . .+.+... ++ ....-.
T Consensus 37 ~v~~~d~~-~~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~--~-g~~~~~~-~~~~~~~~~ 102 (299)
T 2z2n_A 37 MISCINLD-GKITEYPLPTP--DAKVMCLTISSDGEVWFTENA-------ANKIGRITK--K-GIIKEYT-LPNPDSAPY 102 (299)
T ss_dssp EEEEECTT-CCEEEEECSST--TCCEEEEEECTTSCEEEEETT-------TTEEEEECT--T-SCEEEEE-CSSTTCCEE
T ss_pred cEEEEcCC-CCeEEecCCcc--cCceeeEEECCCCCEEEeCCC-------CCeEEEECC--C-CcEEEEe-CCCcCCCce
Confidence 47788988 77766543211 122344444457788887542 235899998 5 4444443 22 122233
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++...+++||+.... ...+.+||+ +++...... +.......++++. ++.+|+.... ...+.+
T Consensus 103 ~i~~~~~g~l~v~~~~------~~~i~~~d~-~g~~~~~~~-~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~ 166 (299)
T 2z2n_A 103 GITEGPNGDIWFTEMN------GNRIGRITD-DGKIREYEL-PNKGSYPSFITLGSDNALWFTENQ--------NNAIGR 166 (299)
T ss_dssp EEEECTTSCEEEEETT------TTEEEEECT-TCCEEEEEC-SSTTCCEEEEEECTTSCEEEEETT--------TTEEEE
T ss_pred eeEECCCCCEEEEecC------CceEEEECC-CCCEEEecC-CCCCCCCceEEEcCCCCEEEEeCC--------CCEEEE
Confidence 4444445789987543 157889998 666554421 1111111344444 5688886532 236899
Q ss_pred EeCCCCceEEc
Q 013264 290 YDPKTGSWSKF 300 (446)
Q Consensus 290 yd~~~~~W~~~ 300 (446)
||+ +++...+
T Consensus 167 ~~~-~g~~~~~ 176 (299)
T 2z2n_A 167 ITE-SGDITEF 176 (299)
T ss_dssp ECT-TCCEEEE
T ss_pred EcC-CCcEEEe
Confidence 999 7777665
No 37
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.79 E-value=0.2 Score=45.45 Aligned_cols=134 Identities=9% Similarity=0.035 Sum_probs=82.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..+|+.+++=..-- ++. ..+....+. .+++||+.... .+.+++||+ .+.+ .+...+.+-...+
T Consensus 76 ~v~~iD~~Tgkv~~~~-l~~--~~FgeGit~-~g~~Ly~ltw~-------~~~v~V~D~--~Tl~--~~~ti~~~~eGwG 140 (268)
T 3nok_A 76 TLRQLSLESAQPVWME-RLG--NIFAEGLAS-DGERLYQLTWT-------EGLLFTWSG--MPPQ--RERTTRYSGEGWG 140 (268)
T ss_dssp EEEECCSSCSSCSEEE-ECT--TCCEEEEEE-CSSCEEEEESS-------SCEEEEEET--TTTE--EEEEEECSSCCCC
T ss_pred EEEEEECCCCcEEeEE-CCC--CcceeEEEE-eCCEEEEEEcc-------CCEEEEEEC--CcCc--EEEEEeCCCceeE
Confidence 3678888887654433 441 223344444 78999998653 457999999 4444 3333333445567
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEec---CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRML---PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~---~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~ 288 (446)
++.-+ +++|+.-| .+.+.++|+.|.+=..- ..-+.+...-..+...+++||+--- ..+.|.
T Consensus 141 Lt~Dg-~~L~vSdG-------s~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~lyanvw--------~s~~I~ 204 (268)
T 3nok_A 141 LCYWN-GKLVRSDG-------GTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIYANIW--------HSSDVL 204 (268)
T ss_dssp EEEET-TEEEEECS-------SSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEEEEET--------TCSEEE
T ss_pred EecCC-CEEEEECC-------CCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEEEEEC--------CCCeEE
Confidence 77666 78999754 26899999998764421 2222222211234556899997432 245899
Q ss_pred EEeCCCCc
Q 013264 289 CYDPKTGS 296 (446)
Q Consensus 289 ~yd~~~~~ 296 (446)
+.|+++++
T Consensus 205 vIDp~TG~ 212 (268)
T 3nok_A 205 EIDPATGT 212 (268)
T ss_dssp EECTTTCB
T ss_pred EEeCCCCc
Confidence 99999985
No 38
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=95.41 E-value=0.41 Score=44.74 Aligned_cols=178 Identities=11% Similarity=0.073 Sum_probs=89.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC--CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS--RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~--~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||....++..+..+.. ......+.....+ +.+++.|+.++ .+.+||. .+.+|..+..+......
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~~l~s~~~dg-------~v~iwd~--~~~~~~~~~~~~~~~~~ 103 (379)
T 3jrp_A 34 TIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDG-------KVLIWKE--ENGRWSQIAVHAVHSAS 103 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETTS-------CEEEEEE--ETTEEEEEEEECCCSSC
T ss_pred cEEEEecCCCcceeeeEecC-CCCcEEEEEeCCCCCCCEEEEeccCC-------EEEEEEc--CCCceeEeeeecCCCcc
Confidence 36677776666655544442 1111122222222 56777777543 5888999 77887766554433333
Q ss_pred eEEEEEC-C--cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--------------CCEEEEE
Q 013264 210 FACAVVG-A--STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--------------GDRFFVV 272 (446)
Q Consensus 210 ~~~~~~~-d--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--------------~~~lyv~ 272 (446)
..++.+. + +.+++.|+.+ ..+.+||..+..-...-.+........+++.. ++.+++.
T Consensus 104 v~~~~~~~~~~~~~l~~~~~d------~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~ 177 (379)
T 3jrp_A 104 VNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 177 (379)
T ss_dssp EEEEEECCGGGCSEEEEEETT------SEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC----------CTTCEEEE
T ss_pred eEEEEeCCCCCCCEEEEecCC------CcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEE
Confidence 3333333 2 4566666543 57888998776321111111111111233333 3667777
Q ss_pred eCCCCCCCCcccCcEEEEeCCCCc--eEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 273 SGYGTESQGRFKPDAECYDPKTGS--WSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 273 GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
|+.++ .+..||..++. |..+.. ..........+.+...+..+.+++.|+.++.
T Consensus 178 ~~~dg--------~i~i~d~~~~~~~~~~~~~-----~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~ 232 (379)
T 3jrp_A 178 GGADN--------LVKIWKYNSDAQTYVLEST-----LEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 232 (379)
T ss_dssp EETTS--------CEEEEEEETTTTEEEEEEE-----ECCCSSCEEEEEECCCCSSSEEEEEEETTSC
T ss_pred EeCCC--------eEEEEEecCCCcceeeEEE-----EecccCcEeEEEECCCCCCCCeEEEEeCCCE
Confidence 77543 58888886553 554432 1122223333444420000377888887664
No 39
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.41 E-value=0.4 Score=44.70 Aligned_cols=149 Identities=13% Similarity=0.069 Sum_probs=79.4
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc-Ccc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV-ARS 208 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~-~r~ 208 (446)
...++.+|..++++..+..... .......+..-+++||+.+... ....+++||. .+.+++.+..... ...
T Consensus 17 ~i~v~~~d~~tg~~~~~~~~~~--~~~p~~~a~spdg~l~~~~~~~-----~~~~v~~~~~--~~g~~~~~~~~~~~~~~ 87 (347)
T 3hfq_A 17 GIYQGTLDTTAKTLTNDGLLAA--TQNPTYLALSAKDCLYSVDKED-----DEGGIAAWQI--DGQTAHKLNTVVAPGTP 87 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEEEE--CSCCCCEEECTTCEEEEEEEET-----TEEEEEEEEE--ETTEEEEEEEEEEESCC
T ss_pred CEEEEEEcCCCCeEEEeeeeec--cCCcceEEEccCCeEEEEEecC-----CCceEEEEEe--cCCcEEEeeeeecCCCC
Confidence 3457788998888876543221 1111234444578888776421 1346899999 7777776654321 222
Q ss_pred ceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECC-CCcEEecCCCC------ccCC---cceEEEEE-CCEEEEEeCCC
Q 013264 209 FFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVE-ADEWRMLPEMD------EERD---ECQGVCLE-GDRFFVVSGYG 276 (446)
Q Consensus 209 ~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~~------~~r~---~~~~~~~~-~~~lyv~GG~~ 276 (446)
-..++.-.|+ .||+.+.. ...+.+||.. +.+.+.+.... .+|. ..+.+++. ++++|+.+..
T Consensus 88 p~~~a~spdg~~l~~~~~~------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~- 160 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYH------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG- 160 (347)
T ss_dssp CSEEEEETTTTEEEEEETT------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-
T ss_pred CEEEEECCCCCEEEEEeCC------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-
Confidence 2334444444 57766532 1467888874 33444332111 1111 11233433 5577776542
Q ss_pred CCCCCcccCcEEEEeCC-CCceEEcc
Q 013264 277 TESQGRFKPDAECYDPK-TGSWSKFD 301 (446)
Q Consensus 277 ~~~~~~~~~~v~~yd~~-~~~W~~~~ 301 (446)
.+.+..||+. +++...+.
T Consensus 161 -------~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 161 -------SDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp -------TTEEEEEEECTTSCEEEEE
T ss_pred -------CCEEEEEEECCCCcEEEee
Confidence 2368899988 56665443
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=95.29 E-value=1.5 Score=41.32 Aligned_cols=137 Identities=15% Similarity=0.136 Sum_probs=76.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+++-...-... ....+.+... +..||+.+.. ...+.+||+ .+.+-...-. ......
T Consensus 55 ~i~v~d~~~~~~~~~~~~~----~~v~~~~~spdg~~l~~~~~~-------~~~v~v~d~--~~~~~~~~~~--~~~~~~ 119 (391)
T 1l0q_A 55 DVSIIDTATNNVIATVPAG----SSPQGVAVSPDGKQVYVTNMA-------SSTLSVIDT--TSNTVAGTVK--TGKSPL 119 (391)
T ss_dssp EEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEETT-------TTEEEEEET--TTTEEEEEEE--CSSSEE
T ss_pred eEEEEECCCCeEEEEEECC----CCccceEECCCCCEEEEEECC-------CCEEEEEEC--CCCeEEEEEe--CCCCcc
Confidence 5778898887665433322 1223333323 3456666543 246999999 6665443322 222223
Q ss_pred EEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.++...+ ..||+.++.+ ..+.+||..+.+....-.... . ...+++. +..||+.++.+ ..+
T Consensus 120 ~~~~s~dg~~l~~~~~~~------~~v~~~d~~~~~~~~~~~~~~--~-~~~~~~~~dg~~l~~~~~~~--------~~v 182 (391)
T 1l0q_A 120 GLALSPDGKKLYVTNNGD------KTVSVINTVTKAVINTVSVGR--S-PKGIAVTPDGTKVYVANFDS--------MSI 182 (391)
T ss_dssp EEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECCS--S-EEEEEECTTSSEEEEEETTT--------TEE
T ss_pred eEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEEEEecCC--C-cceEEECCCCCEEEEEeCCC--------CEE
Confidence 3444333 4577776532 588999998887654322211 1 1233333 33677776542 369
Q ss_pred EEEeCCCCceEEc
Q 013264 288 ECYDPKTGSWSKF 300 (446)
Q Consensus 288 ~~yd~~~~~W~~~ 300 (446)
..||+.+++-...
T Consensus 183 ~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 183 SVIDTVTNSVIDT 195 (391)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCeEEEE
Confidence 9999998865443
No 41
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.18 E-value=0.23 Score=45.02 Aligned_cols=110 Identities=9% Similarity=-0.025 Sum_probs=72.8
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
+.... .++.||+..|..+ .+.++|+ .+.+=..-- ++..-...+++..+ ++||+.... .+.+.
T Consensus 58 qGL~~-~~~~Ly~stG~~g-------~v~~iD~--~Tgkv~~~~-l~~~~FgeGit~~g-~~Ly~ltw~------~~~v~ 119 (268)
T 3nok_A 58 QGLVF-HQGHFFESTGHQG-------TLRQLSL--ESAQPVWME-RLGNIFAEGLASDG-ERLYQLTWT------EGLLF 119 (268)
T ss_dssp EEEEE-ETTEEEEEETTTT-------EEEECCS--SCSSCSEEE-ECTTCCEEEEEECS-SCEEEEESS------SCEEE
T ss_pred ceEEE-ECCEEEEEcCCCC-------EEEEEEC--CCCcEEeEE-CCCCcceeEEEEeC-CEEEEEEcc------CCEEE
Confidence 44444 6899999998643 3889999 666543322 44332334566666 799998543 26899
Q ss_pred EEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 238 VYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
+||+.|.+=..- .+.+..+ .+++..++.||+.-| .+.++.+|+++.+=
T Consensus 120 V~D~~Tl~~~~t--i~~~~eG-wGLt~Dg~~L~vSdG---------s~~l~~iDp~T~~v 167 (268)
T 3nok_A 120 TWSGMPPQRERT--TRYSGEG-WGLCYWNGKLVRSDG---------GTMLTFHEPDGFAL 167 (268)
T ss_dssp EEETTTTEEEEE--EECSSCC-CCEEEETTEEEEECS---------SSEEEEECTTTCCE
T ss_pred EEECCcCcEEEE--EeCCCce-eEEecCCCEEEEECC---------CCEEEEEcCCCCeE
Confidence 999988754422 2222233 566777889999865 23799999999753
No 42
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.00 E-value=2.4 Score=39.88 Aligned_cols=137 Identities=15% Similarity=0.224 Sum_probs=76.6
Q ss_pred eEEEEECCCCc--EEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCc--
Q 013264 132 GLTIFNASNGT--WERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR-- 207 (446)
Q Consensus 132 ~~~~ydp~~~~--W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r-- 207 (446)
.+.+||+.+++ |+.-...+. .........+..++.||+ |.. ...++.+|+.+.+..|+.-...+...
T Consensus 154 ~l~~~d~~tG~~~W~~~~~~~~-~~~~~~~~~~~~~~~v~~-g~~-------~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 224 (376)
T 3q7m_A 154 QLQALNEADGAVKWTVNLDMPS-LSLRGESAPTTAFGAAVV-GGD-------NGRVSAVLMEQGQMIWQQRISQATGSTE 224 (376)
T ss_dssp EEEEEETTTCCEEEEEECCC------CCCCCCEEETTEEEE-CCT-------TTEEEEEETTTCCEEEEEECCC------
T ss_pred eEEEEECCCCcEEEEEeCCCCc-eeecCCCCcEEECCEEEE-EcC-------CCEEEEEECCCCcEEEEEecccCCCCcc
Confidence 57889987775 876443221 101111222235777776 322 23688999833334576543322111
Q ss_pred ------cceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCCcceEEEEECCEEEEEeCCCCCC
Q 013264 208 ------SFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTES 279 (446)
Q Consensus 208 ------~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~ 279 (446)
.....++.+ +.||+.+. ...+..||+.++ .|+.-.. ...+.++.++.||+....
T Consensus 225 ~~~~~~~~~~p~~~~-~~v~~~~~-------~g~l~~~d~~tG~~~w~~~~~------~~~~~~~~~~~l~~~~~~---- 286 (376)
T 3q7m_A 225 IDRLSDVDTTPVVVN-GVVFALAY-------NGNLTALDLRSGQIMWKRELG------SVNDFIVDGNRIYLVDQN---- 286 (376)
T ss_dssp -----CCCCCCEEET-TEEEEECT-------TSCEEEEETTTCCEEEEECCC------CEEEEEEETTEEEEEETT----
T ss_pred cccccccCCCcEEEC-CEEEEEec-------CcEEEEEECCCCcEEeeccCC------CCCCceEECCEEEEEcCC----
Confidence 112223445 78888642 146789999876 5875421 114566778999997542
Q ss_pred CCcccCcEEEEeCCCCc--eEEc
Q 013264 280 QGRFKPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 280 ~~~~~~~v~~yd~~~~~--W~~~ 300 (446)
..+++||+.+++ |+.-
T Consensus 287 -----g~l~~~d~~tG~~~w~~~ 304 (376)
T 3q7m_A 287 -----DRVMALTIDGGVTLWTQS 304 (376)
T ss_dssp -----CCEEEEETTTCCEEEEEC
T ss_pred -----CeEEEEECCCCcEEEeec
Confidence 269999998875 7654
No 43
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.99 E-value=1.9 Score=38.62 Aligned_cols=140 Identities=6% Similarity=0.022 Sum_probs=77.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||+. ++........ .....++.++..++.||+.... ...+.+||+ . .+............-++
T Consensus 42 ~v~~~~~~-~~~~~~~~~~--~~~~~~~i~~~~~g~l~v~~~~-------~~~v~~~d~--~-g~~~~~~~~~~~~~~~~ 108 (300)
T 2qc5_A 42 KISSLDQS-GRIKEFEVPT--PDAKVMCLIVSSLGDIWFTENG-------ANKIGKLSK--K-GGFTEYPLPQPDSGPYG 108 (300)
T ss_dssp EEEEECTT-SCEEEEECSS--TTCCEEEEEECTTSCEEEEETT-------TTEEEEECT--T-SCEEEEECSSTTCCEEE
T ss_pred eEEEECCC-CceEEEECCC--CCCcceeEEECCCCCEEEEecC-------CCeEEEECC--C-CCeEEecCCCCCCCCcc
Confidence 57788888 7766543221 1122244444456788887532 346899999 6 56554422111222334
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
+++..++++|+.... ...+.+||+. ++..... ++.......++++ -+++||+.... ...+.+|
T Consensus 109 i~~~~~g~l~v~~~~------~~~i~~~~~~-g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~--------~~~i~~~ 172 (300)
T 2qc5_A 109 ITEGLNGDIWFTQLN------GDRIGKLTAD-GTIYEYD-LPNKGSYPAFITLGSDNALWFTENQ--------NNSIGRI 172 (300)
T ss_dssp EEECSTTCEEEEETT------TTEEEEECTT-SCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEEEE
T ss_pred ceECCCCCEEEEccC------CCeEEEECCC-CCEEEcc-CCCCCCCceeEEECCCCCEEEEecC--------CCeEEEE
Confidence 444435789987532 1478889987 6555432 1211112134444 25678886532 2368999
Q ss_pred eCCCCceEEcc
Q 013264 291 DPKTGSWSKFD 301 (446)
Q Consensus 291 d~~~~~W~~~~ 301 (446)
|+ +++...+.
T Consensus 173 ~~-~g~~~~~~ 182 (300)
T 2qc5_A 173 TN-TGKLEEYP 182 (300)
T ss_dssp CT-TCCEEEEE
T ss_pred CC-CCcEEEee
Confidence 99 67776653
No 44
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.96 E-value=1.9 Score=38.57 Aligned_cols=139 Identities=7% Similarity=-0.013 Sum_probs=77.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc-Cccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV-ARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~-~r~~~ 210 (446)
.+..||+. ++......... ....+..++..++.||+.... ...+++||+ . .+..... ++. ...-.
T Consensus 84 ~v~~~d~~-g~~~~~~~~~~--~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~--~-g~~~~~~-~~~~~~~~~ 149 (300)
T 2qc5_A 84 KIGKLSKK-GGFTEYPLPQP--DSGPYGITEGLNGDIWFTQLN-------GDRIGKLTA--D-GTIYEYD-LPNKGSYPA 149 (300)
T ss_dssp EEEEECTT-SCEEEEECSST--TCCEEEEEECSTTCEEEEETT-------TTEEEEECT--T-SCEEEEE-CSSTTCCEE
T ss_pred eEEEECCC-CCeEEecCCCC--CCCCccceECCCCCEEEEccC-------CCeEEEECC--C-CCEEEcc-CCCCCCCce
Confidence 47788888 66665432211 122344444447889887532 236889999 5 5544332 121 12223
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++.-.+++||+.... ...+.+||+ +++..... ++.......++++. ++.||+.... ...+.+
T Consensus 150 ~i~~d~~g~l~v~~~~------~~~i~~~~~-~g~~~~~~-~~~~~~~~~~i~~d~~g~l~v~~~~--------~~~i~~ 213 (300)
T 2qc5_A 150 FITLGSDNALWFTENQ------NNSIGRITN-TGKLEEYP-LPTNAAAPVGITSGNDGALWFVEIM--------GNKIGR 213 (300)
T ss_dssp EEEECTTSSEEEEETT------TTEEEEECT-TCCEEEEE-CSSTTCCEEEEEECTTSSEEEEETT--------TTEEEE
T ss_pred eEEECCCCCEEEEecC------CCeEEEECC-CCcEEEee-CCCCCCCcceEEECCCCCEEEEccC--------CCEEEE
Confidence 4444344778886532 257889998 66666542 12111121344443 5688887532 236899
Q ss_pred EeCCCCceEEcc
Q 013264 290 YDPKTGSWSKFD 301 (446)
Q Consensus 290 yd~~~~~W~~~~ 301 (446)
||+ +++.....
T Consensus 214 ~~~-~g~~~~~~ 224 (300)
T 2qc5_A 214 ITT-TGEISEYD 224 (300)
T ss_dssp ECT-TCCEEEEE
T ss_pred EcC-CCcEEEEE
Confidence 999 66666653
No 45
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=94.88 E-value=2 Score=38.44 Aligned_cols=144 Identities=10% Similarity=0.127 Sum_probs=76.5
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||+..+.-..+.... ....+..++..++.||+.... ...+.+||+ .......+........-.+
T Consensus 101 ~i~~~d~~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~-------~~~i~~~~~--~g~~~~~~~~~~~~~~p~~ 168 (286)
T 1q7f_A 101 QIQIYNQYGQFVRKFGATI---LQHPRGVTVDNKGRIIVVECK-------VMRVIIFDQ--NGNVLHKFGCSKHLEFPNG 168 (286)
T ss_dssp EEEEECTTSCEEEEECTTT---CSCEEEEEECTTSCEEEEETT-------TTEEEEECT--TSCEEEEEECTTTCSSEEE
T ss_pred EEEEECCCCcEEEEecCcc---CCCceEEEEeCCCCEEEEECC-------CCEEEEEcC--CCCEEEEeCCCCccCCcEE
Confidence 4667775444333332211 112244455457789987542 346899998 5554444422111112234
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
+++-.+++|||.... ...+.+||+....-..+..-.. .....++++. ++.||+....+. ..+.+|
T Consensus 169 i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~g~-~~~p~~i~~d~~G~l~v~~~~~~-------~~i~~~ 234 (286)
T 1q7f_A 169 VVVNDKQEIFISDNR------AHCVKVFNYEGQYLRQIGGEGI-TNYPIGVGINSNGEILIADNHNN-------FNLTIF 234 (286)
T ss_dssp EEECSSSEEEEEEGG------GTEEEEEETTCCEEEEESCTTT-SCSEEEEEECTTCCEEEEECSSS-------CEEEEE
T ss_pred EEECCCCCEEEEECC------CCEEEEEcCCCCEEEEEccCCc-cCCCcEEEECCCCCEEEEeCCCC-------EEEEEE
Confidence 444445789987643 2578999987654444432110 1111344443 568998865321 168999
Q ss_pred eCCCCceEEcc
Q 013264 291 DPKTGSWSKFD 301 (446)
Q Consensus 291 d~~~~~W~~~~ 301 (446)
|+....-..+.
T Consensus 235 ~~~g~~~~~~~ 245 (286)
T 1q7f_A 235 TQDGQLISALE 245 (286)
T ss_dssp CTTSCEEEEEE
T ss_pred CCCCCEEEEEc
Confidence 98665444443
No 46
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.87 E-value=1.9 Score=39.36 Aligned_cols=144 Identities=10% Similarity=0.075 Sum_probs=68.4
Q ss_pred eEEEEECC-CCcEEecCCCCCCCCccceEEEEeeCCE-EEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNAS-NGTWERIRPHVGRIPMFCQCVAVPASRK-LLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~-~~~W~~l~~~~~~~p~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||.. +++...+...+. .....+.+..-+++ ||+.+.. ...+.+|+....+.+++.+..++.....
T Consensus 16 ~v~~~~~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~-------~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 86 (343)
T 1ri6_A 16 QIHVWNLNHEGALTLTQVVDV--PGQVQPMVVSPDKRYLYVGVRP-------EFRVLAYRIAPDDGALTFAAESALPGSL 86 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEC--SSCCCCEEECTTSSEEEEEETT-------TTEEEEEEECTTTCCEEEEEEEECSSCC
T ss_pred eEEEEEECCCCcEEEeeeEec--CCCCceEEECCCCCEEEEeecC-------CCeEEEEEecCCCCceeeccccccCCCC
Confidence 35666663 444544433221 11122333333444 6665432 1357777761026677766544433333
Q ss_pred eEEEEECCc-EEEEEeccCCCCCCCCeEEEEECCCC-cEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccC
Q 013264 210 FACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEAD-EWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 210 ~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~ 285 (446)
..++.-.++ .||+.+..+ ..+.+||...+ +...+........ ..++++. +..||+.+.. ..
T Consensus 87 ~~~~~s~dg~~l~~~~~~~------~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~--------~~ 151 (343)
T 1ri6_A 87 THISTDHQGQFVFVGSYNA------GNVSVTRLEDGLPVGVVDVVEGLDG-CHSANISPDNRTLWVPALK--------QD 151 (343)
T ss_dssp SEEEECTTSSEEEEEETTT------TEEEEEEEETTEEEEEEEEECCCTT-BCCCEECTTSSEEEEEEGG--------GT
T ss_pred cEEEEcCCCCEEEEEecCC------CeEEEEECCCCccccccccccCCCC-ceEEEECCCCCEEEEecCC--------CC
Confidence 344443344 466655321 46788887422 2222221111111 1233333 3367776532 23
Q ss_pred cEEEEeCCC-CceEE
Q 013264 286 DAECYDPKT-GSWSK 299 (446)
Q Consensus 286 ~v~~yd~~~-~~W~~ 299 (446)
.+..||+.+ ++...
T Consensus 152 ~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 152 RICLFTVSDDGHLVA 166 (343)
T ss_dssp EEEEEEECTTSCEEE
T ss_pred EEEEEEecCCCceee
Confidence 689999987 66654
No 47
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=94.85 E-value=0.0072 Score=61.89 Aligned_cols=34 Identities=18% Similarity=0.426 Sum_probs=31.9
Q ss_pred CCCChHHHHHHHhccc-CccchhhHHhcccchhhh
Q 013264 17 IPGLPDEIAMECLIRV-PYKFHNDLKSVCQRWLNL 50 (446)
Q Consensus 17 ~~~LPddl~~~iLarl-P~~~~~~~r~VcK~w~~l 50 (446)
...||||++++||.+| |..+..+++.|||+|+.+
T Consensus 13 ~~~LPdeil~~I~~~L~~~~d~~~~s~vck~W~~~ 47 (592)
T 3ogk_B 13 CVATVDDVIEQVMTYITDPKDRDSASLVCRRWFKI 47 (592)
T ss_dssp CCCCGGGTHHHHHTTCCCHHHHHHHTTSCHHHHHH
T ss_pred cCCCCHHHHHHHHHhcCCHHHHHHHHHHhHHHHHh
Confidence 3579999999999999 899999999999999987
No 48
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.80 E-value=4.2 Score=42.73 Aligned_cols=142 Identities=9% Similarity=0.110 Sum_probs=78.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCC-ccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc-Cccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIP-MFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV-ARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p-~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~-~r~~ 209 (446)
.+..||+.++++........ ++ ....+.+...++.|++ |.. ..-+++||+ .+.+++....... ...-
T Consensus 384 Gl~~~~~~~~~~~~~~~~~~-~~~~~v~~i~~d~~g~lWi-gt~-------~~Gl~~~~~--~~~~~~~~~~~~~~~~~v 452 (781)
T 3v9f_A 384 GINVFENGKRVAIYNKENRE-LLSNSVLCSLKDSEGNLWF-GTY-------LGNISYYNT--RLKKFQIIELEKNELLDV 452 (781)
T ss_dssp CEEEEETTEEEEECC------CCCSBEEEEEECTTSCEEE-EET-------TEEEEEECS--SSCEEEECCSTTTCCCCE
T ss_pred cEEEEECCCCeEEEccCCCC-CCCcceEEEEECCCCCEEE-Eec-------cCCEEEEcC--CCCcEEEeccCCCCCCeE
Confidence 36678887777765531111 11 1123333333677877 321 135889999 8888887753211 1122
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCC---ccCCcceEEEE-ECCEEEEEeCCCCCCCCcccC
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMD---EERDECQGVCL-EGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 285 (446)
.+++...++.||+... .-+.+||+.+++|+...... .......+++. .++.|++-.. ..
T Consensus 453 ~~i~~d~~g~lwigt~--------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~---------~~ 515 (781)
T 3v9f_A 453 RVFYEDKNKKIWIGTH--------AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF---------GG 515 (781)
T ss_dssp EEEEECTTSEEEEEET--------TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES---------SS
T ss_pred EEEEECCCCCEEEEEC--------CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc---------CC
Confidence 2333333478887532 35789999999887664322 11111122222 2567877432 12
Q ss_pred cEEEEeCCCCceEEcc
Q 013264 286 DAECYDPKTGSWSKFD 301 (446)
Q Consensus 286 ~v~~yd~~~~~W~~~~ 301 (446)
.+.+||+.+++++...
T Consensus 516 Gl~~~~~~~~~~~~~~ 531 (781)
T 3v9f_A 516 GVGIYTPDMQLVRKFN 531 (781)
T ss_dssp CEEEECTTCCEEEEEC
T ss_pred CEEEEeCCCCeEEEcc
Confidence 5899999999998875
No 49
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=94.66 E-value=0.8 Score=43.94 Aligned_cols=141 Identities=16% Similarity=0.129 Sum_probs=79.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc---cCcc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS---VARS 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p---~~r~ 208 (446)
.++.+|+.+.++..+..++. +....+.+..-++.+++.++.+ ..+.+||+ .+.+........ ....
T Consensus 102 ~l~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~~~~~~~~~~~~-------~~i~~~d~--~~g~~~~~~~~~~~~~~~~ 170 (433)
T 3bws_A 102 KLIALDKEGITHRFISRFKT--GFQPKSVRFIDNTRLAIPLLED-------EGMDVLDI--NSGQTVRLSPPEKYKKKLG 170 (433)
T ss_dssp CEEECCBTTCSEEEEEEEEC--SSCBCCCEESSSSEEEEEBTTS-------SSEEEEET--TTCCEEEECCCHHHHTTCC
T ss_pred EEEEECCCCCcceEEEEEcC--CCCceEEEEeCCCeEEEEeCCC-------CeEEEEEC--CCCeEeeecCcccccccCC
Confidence 46677777666665544432 2222233333477888887643 35899999 767665543221 1222
Q ss_pred ceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccC
Q 013264 209 FFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 209 ~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~ 285 (446)
....+.+ .++++|+.++.+ ..+.+||..+.+-...-.... ....++++. +..+|+.++.+ .
T Consensus 171 ~v~~~~~~~~~~~~~s~~~d------~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~--------~ 234 (433)
T 3bws_A 171 FVETISIPEHNELWVSQMQA------NAVHVFDLKTLAYKATVDLTG--KWSKILLYDPIRDLVYCSNWIS--------E 234 (433)
T ss_dssp EEEEEEEGGGTEEEEEEGGG------TEEEEEETTTCCEEEEEECSS--SSEEEEEEETTTTEEEEEETTT--------T
T ss_pred ceeEEEEcCCCEEEEEECCC------CEEEEEECCCceEEEEEcCCC--CCeeEEEEcCCCCEEEEEecCC--------C
Confidence 2222333 347888887743 578999998765432211111 111334443 34677776543 3
Q ss_pred cEEEEeCCCCceEE
Q 013264 286 DAECYDPKTGSWSK 299 (446)
Q Consensus 286 ~v~~yd~~~~~W~~ 299 (446)
.+.+||+.+++...
T Consensus 235 ~i~~~d~~~~~~~~ 248 (433)
T 3bws_A 235 DISVIDRKTKLEIR 248 (433)
T ss_dssp EEEEEETTTTEEEE
T ss_pred cEEEEECCCCcEEE
Confidence 69999999886544
No 50
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=94.64 E-value=1.5 Score=41.40 Aligned_cols=109 Identities=11% Similarity=0.117 Sum_probs=65.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc-------cCccceEEEEECCcEEEEEeccCCCCCCCCeE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS-------VARSFFACAVVGASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p-------~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~ 236 (446)
.++.||+... ...++.||+.+.+..|+.-.... ........++.+ ++||+.... ..+
T Consensus 52 ~~~~v~~~~~--------~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~~-------g~l 115 (376)
T 3q7m_A 52 ADNVVYAADR--------AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSG-GHVYIGSEK-------AQV 115 (376)
T ss_dssp ETTEEEEECT--------TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEET-TEEEEEETT-------SEE
T ss_pred ECCEEEEEcC--------CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeC-CEEEEEcCC-------CEE
Confidence 6899998753 23689999833334576543211 112222334444 899886431 578
Q ss_pred EEEECCCCc--EEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEcc
Q 013264 237 EVYDVEADE--WRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKFD 301 (446)
Q Consensus 237 ~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~ 301 (446)
..||..+++ |+.-..- ... ...++.++.+|+... ...+++||+++++ |+.-.
T Consensus 116 ~a~d~~tG~~~W~~~~~~--~~~--~~p~~~~~~v~v~~~---------~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 116 YALNTSDGTVAWQTKVAG--EAL--SRPVVSDGLVLIHTS---------NGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp EEEETTTCCEEEEEECSS--CCC--SCCEEETTEEEEECT---------TSEEEEEETTTCCEEEEEEC
T ss_pred EEEECCCCCEEEEEeCCC--ceE--cCCEEECCEEEEEcC---------CCeEEEEECCCCcEEEEEeC
Confidence 999998774 8753321 111 233566888888543 1369999998875 87654
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.57 E-value=0.71 Score=43.04 Aligned_cols=141 Identities=16% Similarity=0.226 Sum_probs=73.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC--CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS--RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~--~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||..+++|..+..+.. ......++...-+ +.+++.|+.+ ..+.+||. .+..-...-.+......
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~d-------~~i~v~d~--~~~~~~~~~~~~~~~~~ 149 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAV-HSASVNSVQWAPHEYGPLLLVASSD-------GKVSVVEF--KENGTTSPIIIDAHAIG 149 (379)
T ss_dssp CEEEEEEETTEEEEEEEECC-CSSCEEEEEECCGGGCSEEEEEETT-------SEEEEEEC--CTTSCCCEEEEECCTTC
T ss_pred EEEEEEcCCCceeEeeeecC-CCcceEEEEeCCCCCCCEEEEecCC-------CcEEEEec--CCCCceeeEEecCCCCc
Confidence 46788888888776655542 1122233333233 5677777654 35888888 54421111111111111
Q ss_pred eEEEEEC--------------CcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCCcceEEEEE-C---CEE
Q 013264 210 FACAVVG--------------ASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERDECQGVCLE-G---DRF 269 (446)
Q Consensus 210 ~~~~~~~--------------d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~-~---~~l 269 (446)
.....+. ++.+++.|+.+ ..+.+||..++ .|..+..+........++++. + +.+
T Consensus 150 v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~ 223 (379)
T 3jrp_A 150 VNSASWAPATIEEDGEHNGTKESRKFVTGGAD------NLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSY 223 (379)
T ss_dssp EEEEEECCCC----------CTTCEEEEEETT------SCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEE
T ss_pred eEEEEEcCccccccccccCCCCCCEEEEEeCC------CeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCe
Confidence 2222221 25667777654 35778887654 355444333222222344443 3 577
Q ss_pred EEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 270 FVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 270 yv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
++.|+.++ .+..||..+..
T Consensus 224 l~s~~~dg--------~i~iwd~~~~~ 242 (379)
T 3jrp_A 224 LASVSQDR--------TCIIWTQDNEQ 242 (379)
T ss_dssp EEEEETTS--------CEEEEEESSTT
T ss_pred EEEEeCCC--------EEEEEeCCCCC
Confidence 77777543 58888887763
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.30 E-value=0.83 Score=44.19 Aligned_cols=105 Identities=14% Similarity=0.223 Sum_probs=59.8
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
..++..++.|+.++ .+.+||. .+.+-... +........+...+ +.+++.|+.+ ..+.+||..
T Consensus 140 ~~d~~~l~~g~~dg-------~i~iwd~--~~~~~~~~--~~~h~~~v~~l~~~-~~~l~sg~~d------g~i~vwd~~ 201 (435)
T 1p22_A 140 QYDDQKIVSGLRDN-------TIKIWDK--NTLECKRI--LTGHTGSVLCLQYD-ERVIITGSSD------STVRVWDVN 201 (435)
T ss_dssp ECCSSEEEEEESSS-------CEEEEES--SSCCEEEE--ECCCSSCEEEEECC-SSEEEEEETT------SCEEEEESS
T ss_pred EECCCEEEEEeCCC-------eEEEEeC--CCCeEEEE--EcCCCCcEEEEEEC-CCEEEEEcCC------CeEEEEECC
Confidence 35777888887543 5889998 55543322 22222233344445 6777777754 468899998
Q ss_pred CCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 243 ADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+++-...- ........++.. ++.+++.|+.++ .+..||..+..
T Consensus 202 ~~~~~~~~--~~h~~~v~~l~~-~~~~l~s~s~dg--------~i~vwd~~~~~ 244 (435)
T 1p22_A 202 TGEMLNTL--IHHCEAVLHLRF-NNGMMVTCSKDR--------SIAVWDMASPT 244 (435)
T ss_dssp SCCEEEEE--CCCCSCEEEEEC-CTTEEEEEETTS--------CEEEEECSSSS
T ss_pred CCcEEEEE--cCCCCcEEEEEE-cCCEEEEeeCCC--------cEEEEeCCCCC
Confidence 87643221 111122123333 445566666433 68999998764
No 53
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.26 E-value=2.2 Score=44.83 Aligned_cols=178 Identities=11% Similarity=0.073 Sum_probs=91.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC--CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS--RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~--~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||...+++..+..+.. ......+.....+ +.+++.|+.++ .+.+||. .+..|..+..+......
T Consensus 32 ~I~vwd~~~~~~~~~~~l~~-h~~~V~~l~~s~~~~~~~l~s~s~Dg-------~I~vwd~--~~~~~~~~~~~~~h~~~ 101 (753)
T 3jro_A 32 TIKIFEVEGETHKLIDTLTG-HEGPVWRVDWAHPKFGTILASCSYDG-------KVLIWKE--ENGRWSQIAVHAVHSAS 101 (753)
T ss_dssp EEEEEEEETTEEEEEEEECC-CSSCEEEEEECCTTSCSEEEEEETTS-------CEEEEEE--ETTEEEEEEEECCCSSC
T ss_pred cEEEEecCCCCCccceeccC-CcCceEEEEecCCCCCCEEEEEeCCC-------eEEEEEC--CCCcccccccccCCCCC
Confidence 46778877777766655542 1111222332223 66777777643 5889999 77877666554433333
Q ss_pred eEEEEEC-C--cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--------------CCEEEEE
Q 013264 210 FACAVVG-A--STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--------------GDRFFVV 272 (446)
Q Consensus 210 ~~~~~~~-d--~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--------------~~~lyv~ 272 (446)
..++.+. + +.+++.|+.+ ..+.+||..+..-.....+........++... ++.+++.
T Consensus 102 V~~v~~sp~~~~~~l~sgs~d------g~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~s 175 (753)
T 3jro_A 102 VNSVQWAPHEYGPLLLVASSD------GKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVT 175 (753)
T ss_dssp EEEEEECCGGGCSEEEEEETT------SEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEE
T ss_pred eEEEEECCCCCCCEEEEEeCC------CcEEEEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEE
Confidence 3333333 3 4566777643 47888998776221111000111111223332 2566667
Q ss_pred eCCCCCCCCcccCcEEEEeCCCC--ceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 273 SGYGTESQGRFKPDAECYDPKTG--SWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 273 GG~~~~~~~~~~~~v~~yd~~~~--~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
|+.++ .+..||..++ .+..+.. ..........+.+...+..+.+++.||.++.
T Consensus 176 gs~dg--------~I~iwd~~~~~~~~~~~~~-----~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~ 230 (753)
T 3jro_A 176 GGADN--------LVKIWKYNSDAQTYVLEST-----LEGHSDWVRDVAWSPTVLLRSYLASVSQDRT 230 (753)
T ss_dssp EETTS--------CEEEEEEETTTTEEEEEEE-----ECCCSSCEEEEEECCCCSSSEEEEEEESSSC
T ss_pred EECCC--------eEEEEeccCCcccceeeee-----ecCCCCcEEEEEeccCCCCCCEEEEEecCCE
Confidence 76543 5888887655 3444432 1122223333444420000378888887653
No 54
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.24 E-value=0.67 Score=43.37 Aligned_cols=175 Identities=11% Similarity=0.174 Sum_probs=88.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||...++|.....+.........+++..-++..++.|+.++ .+.+||. .+..+..+..+........
T Consensus 39 ~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~-------~v~iw~~--~~~~~~~~~~~~~h~~~v~ 109 (345)
T 3fm0_A 39 RIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDA-------TTCIWKK--NQDDFECVTTLEGHENEVK 109 (345)
T ss_dssp CEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTS-------CEEEEEE--CCC-EEEEEEECCCSSCEE
T ss_pred eEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCC-------cEEEEEc--cCCCeEEEEEccCCCCCce
Confidence 467788877777543222110122223344434677777777654 4677877 5566654443332222222
Q ss_pred -EEEECCcEEEEEeccCCCCCCCCeEEEEECCCC-cEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEE
Q 013264 212 -CAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD-EWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 212 -~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~ 288 (446)
++...++++++.|+.+ ..+.+||..+. .+..+..+........+++.. ++.+++.|+.++ .+.
T Consensus 110 ~v~~sp~~~~l~s~s~D------~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~--------~i~ 175 (345)
T 3fm0_A 110 SVAWAPSGNLLATCSRD------KSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD--------TVK 175 (345)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS--------CEE
T ss_pred EEEEeCCCCEEEEEECC------CeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC--------cEE
Confidence 3333346677777654 46788887654 333222222111111223332 456666676543 688
Q ss_pred EEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 289 CYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 289 ~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
.||..++.|..+... .........+.+.. ++++++.|+.++
T Consensus 176 ~w~~~~~~~~~~~~~-----~~h~~~v~~l~~sp---~g~~l~s~s~D~ 216 (345)
T 3fm0_A 176 LYREEEDDWVCCATL-----EGHESTVWSLAFDP---SGQRLASCSDDR 216 (345)
T ss_dssp EEEEETTEEEEEEEE-----CCCSSCEEEEEECT---TSSEEEEEETTS
T ss_pred EEEecCCCEEEEEEe-----cCCCCceEEEEECC---CCCEEEEEeCCC
Confidence 999999888755421 11122222333322 146777777665
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=94.07 E-value=0.63 Score=43.73 Aligned_cols=141 Identities=10% Similarity=0.192 Sum_probs=70.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc-EEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR-WRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~-W~~~~~~p~~r~~~ 210 (446)
.+.+||..++.|..+..+.. ......+.....++.+++.|+.++ .+.+||. .+.. |.....+.......
T Consensus 34 ~i~iw~~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~s~d~-------~v~vwd~--~~~~~~~~~~~~~~~~~~v 103 (377)
T 3dwl_C 34 QVELYEQDGNGWKHARTFSD-HDKIVTCVDWAPKSNRIVTCSQDR-------NAYVYEK--RPDGTWKQTLVLLRLNRAA 103 (377)
T ss_dssp CBCEEEEETTEEEECCCBCC-CSSCEEEEEECTTTCCEEEEETTS-------SEEEC--------CCCCEEECCCCSSCE
T ss_pred EEEEEEccCCceEEEEEEec-CCceEEEEEEeCCCCEEEEEeCCC-------eEEEEEc--CCCCceeeeeEecccCCce
Confidence 46678888888887777663 122223344434667777777543 5888998 5555 44333322222222
Q ss_pred EEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCc-EEecCCCCc-cCCcceEEEEE-CCEEEEEeCCCCCCCCcccCc
Q 013264 211 ACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADE-WRMLPEMDE-ERDECQGVCLE-GDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 211 ~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~-~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~ 286 (446)
..+.+ .+++.++.|+.+ ..+.+||..+.+ |.....+.. ......++++. ++++++.|+.++ .
T Consensus 104 ~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~--------~ 169 (377)
T 3dwl_C 104 TFVRWSPNEDKFAVGSGA------RVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR--------K 169 (377)
T ss_dssp EEEECCTTSSCCEEEESS------SCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS--------C
T ss_pred EEEEECCCCCEEEEEecC------CeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC--------E
Confidence 22332 245666666653 457888887764 433333322 11122333443 456667776542 5
Q ss_pred EEEEeCCCCc
Q 013264 287 AECYDPKTGS 296 (446)
Q Consensus 287 v~~yd~~~~~ 296 (446)
+..||..+..
T Consensus 170 i~iwd~~~~~ 179 (377)
T 3dwl_C 170 AYVLSAYVRD 179 (377)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEEEecc
Confidence 8888886543
No 56
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=94.04 E-value=3.6 Score=37.77 Aligned_cols=138 Identities=11% Similarity=0.004 Sum_probs=72.2
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC-CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC----
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS-RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA---- 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~-~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~---- 206 (446)
.+..+|+.+.+-...-.... . .+..+...+ +.+|+.+.. .+.++++|+ .+.+-...-.....
T Consensus 70 ~v~~~d~~~~~~~~~~~~~~-~---~~~~~~s~dg~~l~v~~~~-------~~~v~~~d~--~~~~~~~~~~~~~~~~~~ 136 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIHNDL-K---PFGATINNTTQTLWFGNTV-------NSAVTAIDA--KTGEVKGRLVLDDRKRTE 136 (353)
T ss_dssp EEEEECTTTCCEEEEEEESS-C---CCSEEEETTTTEEEEEETT-------TTEEEEEET--TTCCEEEEEESCCCCCCS
T ss_pred cEEEEcCCCCeEEEEEecCC-C---cceEEECCCCCEEEEEecC-------CCEEEEEeC--CCCeeEEEEecCCCcccc
Confidence 57888988876544322221 1 122333334 458887653 237999999 66654322112111
Q ss_pred ----ccceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE--ECCEEEEEeCCCCCC
Q 013264 207 ----RSFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL--EGDRFFVVSGYGTES 279 (446)
Q Consensus 207 ----r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~ 279 (446)
.....++.-.+ +++|+.+... ...+.+||+.+.+-...-+...... .++++ .++.+|+...
T Consensus 137 ~~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~i~~~d~~~~~~~~~~~~~~~~~--~~~~~s~dg~~l~~~~~----- 204 (353)
T 3vgz_A 137 EVRPLQPRELVADDATNTVYISGIGK-----ESVIWVVDGGNIKLKTAIQNTGKMS--TGLALDSEGKRLYTTNA----- 204 (353)
T ss_dssp SCCCCEEEEEEEETTTTEEEEEEESS-----SCEEEEEETTTTEEEEEECCCCTTC--CCCEEETTTTEEEEECT-----
T ss_pred ccCCCCCceEEECCCCCEEEEEecCC-----CceEEEEcCCCCceEEEecCCCCcc--ceEEECCCCCEEEEEcC-----
Confidence 11233444333 5677776321 1578999998775443222111111 22233 2446777643
Q ss_pred CCcccCcEEEEeCCCCceE
Q 013264 280 QGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 280 ~~~~~~~v~~yd~~~~~W~ 298 (446)
...+..||+.+++-.
T Consensus 205 ----~~~i~~~d~~~~~~~ 219 (353)
T 3vgz_A 205 ----DGELITIDTADNKIL 219 (353)
T ss_dssp ----TSEEEEEETTTTEEE
T ss_pred ----CCeEEEEECCCCeEE
Confidence 136889999887643
No 57
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=93.80 E-value=3.5 Score=36.78 Aligned_cols=117 Identities=4% Similarity=0.035 Sum_probs=66.3
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
++.++..++.||+.... ...+.+||+ . ..............-++++.-.++.+|+.... ...+.
T Consensus 18 ~~i~~d~~g~l~v~~~~-------~~~v~~~d~--~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~------~~~i~ 81 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHK-------ANMISCINL--D-GKITEYPLPTPDAKVMCLTISSDGEVWFTENA------ANKIG 81 (299)
T ss_dssp EEEEECTTSCEEEEETT-------TTEEEEECT--T-CCEEEEECSSTTCCEEEEEECTTSCEEEEETT------TTEEE
T ss_pred cceEECCCCCEEEEecC-------CCcEEEEcC--C-CCeEEecCCcccCceeeEEECCCCCEEEeCCC------CCeEE
Confidence 44555457888886432 246899999 6 66665432111222334444345789887542 14688
Q ss_pred EEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 238 VYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+||+. ++.+... ++.......++++. ++.||+.... ...+.+||+ +++...+.
T Consensus 82 ~~~~~-g~~~~~~-~~~~~~~~~~i~~~~~g~l~v~~~~--------~~~i~~~d~-~g~~~~~~ 135 (299)
T 2z2n_A 82 RITKK-GIIKEYT-LPNPDSAPYGITEGPNGDIWFTEMN--------GNRIGRITD-DGKIREYE 135 (299)
T ss_dssp EECTT-SCEEEEE-CSSTTCCEEEEEECTTSCEEEEETT--------TTEEEEECT-TCCEEEEE
T ss_pred EECCC-CcEEEEe-CCCcCCCceeeEECCCCCEEEEecC--------CceEEEECC-CCCEEEec
Confidence 89986 4555443 22111122344444 5789987543 236899999 66666543
No 58
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=93.79 E-value=0.72 Score=43.55 Aligned_cols=137 Identities=13% Similarity=0.136 Sum_probs=76.5
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+++-...-... ....+++...++ .||+.++.+ ..+.+||+ .+.+....-.... .-.
T Consensus 13 ~v~v~d~~~~~~~~~~~~~----~~~~~~~~s~dg~~l~~~~~~d-------~~i~v~d~--~~~~~~~~~~~~~--~v~ 77 (391)
T 1l0q_A 13 NISVIDVTSNKVTATIPVG----SNPMGAVISPDGTKVYVANAHS-------NDVSIIDT--ATNNVIATVPAGS--SPQ 77 (391)
T ss_dssp EEEEEETTTTEEEEEEECS----SSEEEEEECTTSSEEEEEEGGG-------TEEEEEET--TTTEEEEEEECSS--SEE
T ss_pred EEEEEECCCCeEEEEeecC----CCcceEEECCCCCEEEEECCCC-------CeEEEEEC--CCCeEEEEEECCC--Ccc
Confidence 4778898887654432222 112344443344 577776543 46899999 6666543322222 223
Q ss_pred EEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v 287 (446)
+++...+ ..||+.+..+ ..+.+||..+++-...-.... . ..++++. +..||+.++.+ ..+
T Consensus 78 ~~~~spdg~~l~~~~~~~------~~v~v~d~~~~~~~~~~~~~~--~-~~~~~~s~dg~~l~~~~~~~--------~~v 140 (391)
T 1l0q_A 78 GVAVSPDGKQVYVTNMAS------STLSVIDTTSNTVAGTVKTGK--S-PLGLALSPDGKKLYVTNNGD--------KTV 140 (391)
T ss_dssp EEEECTTSSEEEEEETTT------TEEEEEETTTTEEEEEEECSS--S-EEEEEECTTSSEEEEEETTT--------TEE
T ss_pred ceEECCCCCEEEEEECCC------CEEEEEECCCCeEEEEEeCCC--C-cceEEECCCCCEEEEEeCCC--------CEE
Confidence 3333333 4566665432 578999999886554322211 1 1344443 33677777542 379
Q ss_pred EEEeCCCCceEEc
Q 013264 288 ECYDPKTGSWSKF 300 (446)
Q Consensus 288 ~~yd~~~~~W~~~ 300 (446)
..||+.+++....
T Consensus 141 ~~~d~~~~~~~~~ 153 (391)
T 1l0q_A 141 SVINTVTKAVINT 153 (391)
T ss_dssp EEEETTTTEEEEE
T ss_pred EEEECCCCcEEEE
Confidence 9999998876544
No 59
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.75 E-value=2.9 Score=40.20 Aligned_cols=146 Identities=13% Similarity=0.085 Sum_probs=78.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCE-EEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRK-LLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+..+|..+++...+...+. ...+.+..-+++ |++.+..++ ...++++|. .+.+...+..... ...
T Consensus 204 ~i~~~d~~tg~~~~l~~~~~----~~~~~~~spdg~~la~~~~~~g-----~~~i~~~d~--~~~~~~~l~~~~~--~~~ 270 (415)
T 2hqs_A 204 ALVIQTLANGAVRQVASFPR----HNGAPAFSPDGSKLAFALSKTG-----SLNLYVMDL--ASGQIRQVTDGRS--NNT 270 (415)
T ss_dssp EEEEEETTTCCEEEEECCSS----CEEEEEECTTSSEEEEEECTTS-----SCEEEEEET--TTCCEEECCCCSS--CEE
T ss_pred EEEEEECCCCcEEEeecCCC----cccCEEEcCCCCEEEEEEecCC-----CceEEEEEC--CCCCEEeCcCCCC--ccc
Confidence 57788988888776654431 222333333454 554554332 347999999 7777766644321 112
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
..+...|++..++++.... ...++++|..+.+-..+.... ... ..+++ -+++..++++.... ...++.
T Consensus 271 ~~~~spdg~~l~~~s~~~g---~~~i~~~d~~~~~~~~l~~~~--~~~-~~~~~spdG~~l~~~~~~~g-----~~~i~~ 339 (415)
T 2hqs_A 271 EPTWFPDSQNLAFTSDQAG---RPQVYKVNINGGAPQRITWEG--SQN-QDADVSSDGKFMVMVSSNGG-----QQHIAK 339 (415)
T ss_dssp EEEECTTSSEEEEEECTTS---SCEEEEEETTSSCCEECCCSS--SEE-EEEEECTTSSEEEEEEECSS-----CEEEEE
T ss_pred ceEECCCCCEEEEEECCCC---CcEEEEEECCCCCEEEEecCC--Ccc-cCeEECCCCCEEEEEECcCC-----ceEEEE
Confidence 2233334554444432211 257899999887755543211 111 22333 24443344332211 237999
Q ss_pred EeCCCCceEEcc
Q 013264 290 YDPKTGSWSKFD 301 (446)
Q Consensus 290 yd~~~~~W~~~~ 301 (446)
+|+.+++...+.
T Consensus 340 ~d~~~~~~~~l~ 351 (415)
T 2hqs_A 340 QDLATGGVQVLS 351 (415)
T ss_dssp EETTTCCEEECC
T ss_pred EECCCCCEEEec
Confidence 999999887665
No 60
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.70 E-value=0.71 Score=43.02 Aligned_cols=114 Identities=14% Similarity=0.159 Sum_probs=65.0
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc-eEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF-FACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~-~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
++..-++.++++|+.+ ..+.+||. .+.++..+..+...... .+++...+++.++.|+.+ ..+.+
T Consensus 14 ~~~s~~~~~l~~~~~d-------~~v~i~~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d------g~i~v 78 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN-------HEVHIYEK--SGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTD------RNAYV 78 (372)
T ss_dssp EEECTTSSEEEEECSS-------SEEEEEEE--ETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETT------SCEEE
T ss_pred EEECCCCCEEEEEeCC-------CEEEEEeC--CCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCC------CeEEE
Confidence 3333466777777643 36889999 77776666554433222 233344346666777643 46889
Q ss_pred EECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 239 YDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
||..++++.....+........++.+. ++++++.|+.++ .+..||..+..
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~v~i~d~~~~~ 129 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR--------VISICYFEQEN 129 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS--------SEEEEEEETTT
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCC--------EEEEEEecCCC
Confidence 999888876543322222222333333 455666666432 57777776654
No 61
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=93.22 E-value=1.4 Score=40.89 Aligned_cols=138 Identities=9% Similarity=0.187 Sum_probs=73.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF- 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~- 210 (446)
.+.+||..++++..+..+.. ......+....-++.+++.|+.++ .+.+||. .+.++.....+.......
T Consensus 31 ~v~i~~~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~dg-------~i~vwd~--~~~~~~~~~~~~~~~~~v~ 100 (372)
T 1k8k_C 31 EVHIYEKSGNKWVQVHELKE-HNGQVTGVDWAPDSNRIVTCGTDR-------NAYVWTL--KGRTWKPTLVILRINRAAR 100 (372)
T ss_dssp EEEEEEEETTEEEEEEEEEC-CSSCEEEEEEETTTTEEEEEETTS-------CEEEEEE--ETTEEEEEEECCCCSSCEE
T ss_pred EEEEEeCCCCcEEeeeeecC-CCCcccEEEEeCCCCEEEEEcCCC-------eEEEEEC--CCCeeeeeEEeecCCCcee
Confidence 57788888887666555442 122223333334667777777543 5888998 677765543322222222
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc-EEecCCCCcc-CCcceEEEEE-CCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE-WRMLPEMDEE-RDECQGVCLE-GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~-r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v 287 (446)
++....+++.++.|+.+ ..+.+||..+.. |........+ .....++++. ++.+++.|+.++ .+
T Consensus 101 ~~~~~~~~~~l~~~~~d------~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg--------~i 166 (372)
T 1k8k_C 101 CVRWAPNEKKFAVGSGS------RVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF--------KC 166 (372)
T ss_dssp EEEECTTSSEEEEEETT------SSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS--------CE
T ss_pred EEEECCCCCEEEEEeCC------CEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC--------CE
Confidence 33333346666776643 356667665543 3332222111 1111333333 456666666432 68
Q ss_pred EEEeCC
Q 013264 288 ECYDPK 293 (446)
Q Consensus 288 ~~yd~~ 293 (446)
..||..
T Consensus 167 ~~~d~~ 172 (372)
T 1k8k_C 167 RIFSAY 172 (372)
T ss_dssp EEEECC
T ss_pred EEEEcc
Confidence 889964
No 62
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=93.18 E-value=8.3 Score=40.46 Aligned_cols=166 Identities=9% Similarity=0.076 Sum_probs=90.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc---c-Cc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS---V-AR 207 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p---~-~r 207 (446)
.+..||+.+++++....... ......+.+...++.|++... .-+++||+ .+.+|....... . ..
T Consensus 428 Gl~~~~~~~~~~~~~~~~~~-~~~~v~~i~~d~~g~lwigt~---------~Gl~~~~~--~~~~~~~~~~~~~~~~~~~ 495 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELEKN-ELLDVRVFYEDKNKKIWIGTH---------AGVFVIDL--ASKKVIHHYDTSNSQLLEN 495 (781)
T ss_dssp EEEEECSSSCEEEECCSTTT-CCCCEEEEEECTTSEEEEEET---------TEEEEEES--SSSSCCEEECTTTSSCSCS
T ss_pred CEEEEcCCCCcEEEeccCCC-CCCeEEEEEECCCCCEEEEEC---------CceEEEeC--CCCeEEecccCcccccccc
Confidence 56788998888887754210 011223333334678887532 34899999 778887664322 1 11
Q ss_pred cceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCc-cCCcceEEEE-ECCEEEEEeCCCCCCCCcccC
Q 013264 208 SFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDE-ERDECQGVCL-EGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~-~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~ 285 (446)
.-.+++.-.++.||+.... .-+.+||+.+++++....... +.....++.. .++.|++... .
T Consensus 496 ~i~~i~~d~~g~lWigt~~-------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~----------~ 558 (781)
T 3v9f_A 496 FVRSIAQDSEGRFWIGTFG-------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG----------E 558 (781)
T ss_dssp CEEEEEECTTCCEEEEESS-------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET----------T
T ss_pred eeEEEEEcCCCCEEEEEcC-------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC----------C
Confidence 1122333334778775321 246889999999887643111 1111122222 2567887543 2
Q ss_pred cE-EEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEc
Q 013264 286 DA-ECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLG 333 (446)
Q Consensus 286 ~v-~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~G 333 (446)
.+ .+||+.+++++..... ..++.... .+.+...+ +.|++.+
T Consensus 559 Glv~~~d~~~~~~~~~~~~--~gl~~~~i-~~i~~d~~----g~lW~~t 600 (781)
T 3v9f_A 559 GLVCFPSARNFDYQVFQRK--EGLPNTHI-RAISEDKN----GNIWAST 600 (781)
T ss_dssp EEEEESCTTTCCCEEECGG--GTCSCCCC-CEEEECSS----SCEEEEC
T ss_pred CceEEECCCCCcEEEcccc--CCCCCceE-EEEEECCC----CCEEEEc
Confidence 46 8999999988876531 12322222 33333323 5788775
No 63
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=93.09 E-value=3.3 Score=37.59 Aligned_cols=136 Identities=15% Similarity=0.195 Sum_probs=72.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||..+.+....-... .....+.....++..++.|+.+ ..+.+||. .+.+-...- .....-.+
T Consensus 164 ~v~~~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d-------g~i~~~d~--~~~~~~~~~--~~~~~v~~ 229 (337)
T 1gxr_A 164 NIAVWDLHNQTLVRQFQGH---TDGASCIDISNDGTKLWTGGLD-------NTVRSWDL--REGRQLQQH--DFTSQIFS 229 (337)
T ss_dssp CEEEEETTTTEEEEEECCC---SSCEEEEEECTTSSEEEEEETT-------SEEEEEET--TTTEEEEEE--ECSSCEEE
T ss_pred cEEEEeCCCCceeeeeecc---cCceEEEEECCCCCEEEEEecC-------CcEEEEEC--CCCceEeee--cCCCceEE
Confidence 4677887776543322111 1112233333366667777643 36899999 555433221 22222233
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
++...+++.+++|+.+ ..+.+||..+.+=..+..... ...+++.. ++++++.++.+ ..+..|
T Consensus 230 ~~~s~~~~~l~~~~~~------~~i~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~l~~~~~d--------g~i~~~ 292 (337)
T 1gxr_A 230 LGYCPTGEWLAVGMES------SNVEVLHVNKPDKYQLHLHES---CVLSLKFAYCGKWFVSTGKD--------NLLNAW 292 (337)
T ss_dssp EEECTTSSEEEEEETT------SCEEEEETTSSCEEEECCCSS---CEEEEEECTTSSEEEEEETT--------SEEEEE
T ss_pred EEECCCCCEEEEEcCC------CcEEEEECCCCCeEEEcCCcc---ceeEEEECCCCCEEEEecCC--------CcEEEE
Confidence 3333446666776643 468899988775433322111 11233333 45666666643 268999
Q ss_pred eCCCCceE
Q 013264 291 DPKTGSWS 298 (446)
Q Consensus 291 d~~~~~W~ 298 (446)
|..+++-.
T Consensus 293 ~~~~~~~~ 300 (337)
T 1gxr_A 293 RTPYGASI 300 (337)
T ss_dssp ETTTCCEE
T ss_pred ECCCCeEE
Confidence 99887654
No 64
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=93.08 E-value=6.5 Score=37.72 Aligned_cols=146 Identities=11% Similarity=0.031 Sum_probs=78.5
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+.++|.....-..+..-. ....+.+..-+++.+++++.+.. ...++++|. .+.+...+...+. ...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~----~~v~~~~~Spdg~~la~~s~~~~----~~~i~~~d~--~tg~~~~l~~~~~--~~~ 226 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSP----QPLMSPAWSPDGSKLAYVTFESG----RSALVIQTL--ANGAVRQVASFPR--HNG 226 (415)
T ss_dssp EEEEEEETTSCSCEEEEEES----SCEEEEEECTTSSEEEEEECTTS----SCEEEEEET--TTCCEEEEECCSS--CEE
T ss_pred ceEEEEcCCCCCCEEEeCCC----CcceeeEEcCCCCEEEEEEecCC----CcEEEEEEC--CCCcEEEeecCCC--ccc
Confidence 46777887655444433211 11122333345665555554321 357999999 7787766654332 222
Q ss_pred EEEEECCcE-EEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCE-EEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGAST-VCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDR-FFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~~v 287 (446)
+.+.-.|++ |++.+..++ ...+++||..+++...+...... ....+.. +++ |++.+..++ ...+
T Consensus 227 ~~~~spdg~~la~~~~~~g----~~~i~~~d~~~~~~~~l~~~~~~---~~~~~~spdg~~l~~~s~~~g------~~~i 293 (415)
T 2hqs_A 227 APAFSPDGSKLAFALSKTG----SLNLYVMDLASGQIRQVTDGRSN---NTEPTWFPDSQNLAFTSDQAG------RPQV 293 (415)
T ss_dssp EEEECTTSSEEEEEECTTS----SCEEEEEETTTCCEEECCCCSSC---EEEEEECTTSSEEEEEECTTS------SCEE
T ss_pred CEEEcCCCCEEEEEEecCC----CceEEEEECCCCCEEeCcCCCCc---ccceEECCCCCEEEEEECCCC------CcEE
Confidence 333333454 554554332 25799999999887766543321 1233332 444 554443222 2368
Q ss_pred EEEeCCCCceEEcc
Q 013264 288 ECYDPKTGSWSKFD 301 (446)
Q Consensus 288 ~~yd~~~~~W~~~~ 301 (446)
+.+|+.+++-..+.
T Consensus 294 ~~~d~~~~~~~~l~ 307 (415)
T 2hqs_A 294 YKVNINGGAPQRIT 307 (415)
T ss_dssp EEEETTSSCCEECC
T ss_pred EEEECCCCCEEEEe
Confidence 99999888755543
No 65
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=92.91 E-value=2.5 Score=38.38 Aligned_cols=139 Identities=12% Similarity=0.109 Sum_probs=71.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF- 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~- 210 (446)
.+..||..+.+......+.. ......+.....++..++.|+.++ .+.+||. .+.+.... +.......
T Consensus 120 ~i~~~d~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg-------~v~~~d~--~~~~~~~~--~~~~~~~i~ 187 (337)
T 1gxr_A 120 TLSIWDLAAPTPRIKAELTS-SAPACYALAISPDSKVCFSCCSDG-------NIAVWDL--HNQTLVRQ--FQGHTDGAS 187 (337)
T ss_dssp EEEEEECCCC--EEEEEEEC-SSSCEEEEEECTTSSEEEEEETTS-------CEEEEET--TTTEEEEE--ECCCSSCEE
T ss_pred cEEEEECCCCCcceeeeccc-CCCceEEEEECCCCCEEEEEeCCC-------cEEEEeC--CCCceeee--eecccCceE
Confidence 46788888777544333321 111122333334666777776543 5889999 65543322 22111222
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++...+++.++.|+.+ ..+.+||..+.+-...-..+.. ..++++. +++++++|+.+ ..+..
T Consensus 188 ~~~~~~~~~~l~~~~~d------g~i~~~d~~~~~~~~~~~~~~~---v~~~~~s~~~~~l~~~~~~--------~~i~~ 250 (337)
T 1gxr_A 188 CIDISNDGTKLWTGGLD------NTVRSWDLREGRQLQQHDFTSQ---IFSLGYCPTGEWLAVGMES--------SNVEV 250 (337)
T ss_dssp EEEECTTSSEEEEEETT------SEEEEEETTTTEEEEEEECSSC---EEEEEECTTSSEEEEEETT--------SCEEE
T ss_pred EEEECCCCCEEEEEecC------CcEEEEECCCCceEeeecCCCc---eEEEEECCCCCEEEEEcCC--------CcEEE
Confidence 23333345666666643 5789999987754332222211 1233332 45666666543 26899
Q ss_pred EeCCCCceEE
Q 013264 290 YDPKTGSWSK 299 (446)
Q Consensus 290 yd~~~~~W~~ 299 (446)
||..+.+=..
T Consensus 251 ~~~~~~~~~~ 260 (337)
T 1gxr_A 251 LHVNKPDKYQ 260 (337)
T ss_dssp EETTSSCEEE
T ss_pred EECCCCCeEE
Confidence 9998875433
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=92.74 E-value=7.3 Score=37.50 Aligned_cols=136 Identities=10% Similarity=0.106 Sum_probs=71.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||..+.+-...-... .....+.....++..++.|+.++ .+.+||. .+.+- +..+........
T Consensus 291 ~i~vwd~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~sg~~dg-------~i~vwd~--~~~~~--~~~~~~h~~~v~ 356 (464)
T 3v7d_B 291 TLIVWDVAQMKCLYILSGH---TDRIYSTIYDHERKRCISASMDT-------TIRIWDL--ENGEL--MYTLQGHTALVG 356 (464)
T ss_dssp CEEEEETTTTEEEEEECCC---SSCEEEEEEETTTTEEEEEETTS-------CEEEEET--TTTEE--EEEECCCSSCEE
T ss_pred eEEEEECCCCcEEEEecCC---CCCEEEEEEcCCCCEEEEEeCCC-------cEEEEEC--CCCcE--EEEEeCCCCcEE
Confidence 4567777665433221111 11223333334566677776543 5889999 55542 222222223334
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEe
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+..+. +..++.|+.+ ..+.+||..+..-........ ... ..+...++.+.+.|+ + ..+..||
T Consensus 357 ~~~~~-~~~l~s~s~d------g~v~vwd~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~~~~-d--------g~i~iwd 418 (464)
T 3v7d_B 357 LLRLS-DKFLVSAAAD------GSIRGWDANDYSRKFSYHHTN-LSA-ITTFYVSDNILVSGS-E--------NQFNIYN 418 (464)
T ss_dssp EEEEC-SSEEEEEETT------SEEEEEETTTCCEEEEEECTT-CCC-EEEEEECSSEEEEEE-T--------TEEEEEE
T ss_pred EEEEc-CCEEEEEeCC------CcEEEEECCCCceeeeecCCC-Ccc-EEEEEeCCCEEEEec-C--------CeEEEEE
Confidence 44555 4556666643 478899998765332211111 111 233445666666665 2 2699999
Q ss_pred CCCCceEE
Q 013264 292 PKTGSWSK 299 (446)
Q Consensus 292 ~~~~~W~~ 299 (446)
.++++-..
T Consensus 419 ~~~g~~~~ 426 (464)
T 3v7d_B 419 LRSGKLVH 426 (464)
T ss_dssp TTTCCEEE
T ss_pred CCCCcEEe
Confidence 99987654
No 67
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=92.69 E-value=11 Score=39.51 Aligned_cols=140 Identities=11% Similarity=0.197 Sum_probs=79.2
Q ss_pred eEEEEECCCCcEEecCCCCCCCCc-c-ceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPM-F-CQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~-~-~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+..||+.++++..+... .+. . ..+.....++.|||... ...+++||+ .++++......+....-
T Consensus 151 gl~~~~~~~~~~~~~~~~---~~~~~~i~~i~~d~~g~lwigt~--------~~Gl~~~~~--~~~~~~~~~~~~~~~~i 217 (795)
T 4a2l_A 151 GLIMFDIKESKFIDDSFS---TAMHKTIASTLYRQGDQIYIGTS--------TDGLYTYSI--TQKTFEKVIPILGTKQI 217 (795)
T ss_dssp EEEEEETTTTEEECSSSC---HHHHTCCEEEEEEETTEEEEEES--------SSCEEEEET--TTCCEEECC----CCCE
T ss_pred ceEEEECCCCEEEeccCC---CCCCcceEEEEECCCCCEEEEEC--------CCCEEEEeC--CCCeEEEecCCCCCCee
Confidence 467889888887765431 111 1 12333435788988421 124889999 78888876433222112
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCC---c--cCCcceEEEEE-CCEEEEEeCCCCCCCCcc
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMD---E--ERDECQGVCLE-GDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~---~--~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~ 283 (446)
.++....++.|+|.... .-+.+||+.+++++.....+ . +.....++... ++.|++-..
T Consensus 218 ~~i~~d~~g~lwigt~~-------~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~--------- 281 (795)
T 4a2l_A 218 QAILQQSPTRIWVATEG-------AGLFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTF--------- 281 (795)
T ss_dssp EEEEEEETTEEEEEEBS-------SCEEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEEES---------
T ss_pred EEEEEcCCCCEEEEECC-------CCeEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEEeC---------
Confidence 23333334788774311 34789999999888664321 1 11111233332 567777431
Q ss_pred cCcEEEEeCCCCceEEcc
Q 013264 284 KPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 284 ~~~v~~yd~~~~~W~~~~ 301 (446)
..+..||+.++++..+.
T Consensus 282 -~Gl~~~~~~~~~~~~~~ 298 (795)
T 4a2l_A 282 -NDLNIYHEGTDSFASYS 298 (795)
T ss_dssp -SCEEEEETTTTEEEEEC
T ss_pred -ChhheEcCCCCeEEEEe
Confidence 25889999999998875
No 68
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.69 E-value=4.9 Score=35.32 Aligned_cols=139 Identities=12% Similarity=-0.013 Sum_probs=73.7
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
..+..||+.+........... ....+.++..++.||+... . ..+++||+ .+.....+.... ...-.
T Consensus 46 ~~i~~~~~~~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~-~-------~~i~~~d~--~~~~~~~~~~~~-~~~p~ 111 (270)
T 1rwi_B 46 GRVVKLATGSTGTTVLPFNGL---YQPQGLAVDGAGTVYVTDF-N-------NRVVTLAA--GSNNQTVLPFDG-LNYPE 111 (270)
T ss_dssp CEEEEECC-----EECCCCSC---CSCCCEEECTTCCEEEEET-T-------TEEEEECT--TCSCCEECCCCS-CSSEE
T ss_pred CcEEEecCCCcccceEeeCCc---CCcceeEECCCCCEEEEcC-C-------CEEEEEeC--CCceEeeeecCC-cCCCc
Confidence 357778887766554432221 1123444444678998764 2 36899999 665544442211 11223
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
++++..+++||+.... ...+.+||..+............. ..++++. +++||+.... ...+.+
T Consensus 112 ~i~~~~~g~l~v~~~~------~~~i~~~~~~~~~~~~~~~~~~~~--p~~i~~~~~g~l~v~~~~--------~~~i~~ 175 (270)
T 1rwi_B 112 GLAVDTQGAVYVADRG------NNRVVKLAAGSKTQTVLPFTGLND--PDGVAVDNSGNVYVTDTD--------NNRVVK 175 (270)
T ss_dssp EEEECTTCCEEEEEGG------GTEEEEECTTCCSCEECCCCSCCS--CCCEEECTTCCEEEEEGG--------GTEEEE
T ss_pred ceEECCCCCEEEEECC------CCEEEEEECCCceeEeeccccCCC--ceeEEEeCCCCEEEEECC--------CCEEEE
Confidence 4444435789987543 146788887766554432211111 1234444 5689987542 247999
Q ss_pred EeCCCCceEE
Q 013264 290 YDPKTGSWSK 299 (446)
Q Consensus 290 yd~~~~~W~~ 299 (446)
||+.+..-..
T Consensus 176 ~~~~~~~~~~ 185 (270)
T 1rwi_B 176 LEAESNNQVV 185 (270)
T ss_dssp ECTTTCCEEE
T ss_pred EecCCCceEe
Confidence 9998776443
No 69
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=92.68 E-value=1.4 Score=40.58 Aligned_cols=144 Identities=8% Similarity=0.004 Sum_probs=78.4
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEE-ccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRR-VKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~-~~~~p~~r~~~ 210 (446)
.+..||+.+++...+.... .....+.+...++.+|+....... ....+++||+ .+..... +........-.
T Consensus 67 ~i~~~d~~~~~~~~~~~~~---~~~~~~i~~~~dg~l~v~~~~~~~---~~~~i~~~d~--~~~~~~~~~~~~~~~~~~~ 138 (333)
T 2dg1_A 67 NIFKINPETKEIKRPFVSH---KANPAAIKIHKDGRLFVCYLGDFK---STGGIFAATE--NGDNLQDIIEDLSTAYCID 138 (333)
T ss_dssp EEEEECTTTCCEEEEEECS---SSSEEEEEECTTSCEEEEECTTSS---SCCEEEEECT--TSCSCEEEECSSSSCCCEE
T ss_pred EEEEEeCCCCcEEEEeeCC---CCCcceEEECCCCcEEEEeCCCCC---CCceEEEEeC--CCCEEEEEEccCccCCccc
Confidence 5788999988877653211 122234444457788887643211 1347999999 6666553 22222222223
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCcEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~v~ 288 (446)
.+++..++++|+.............+++||+.+.+...+..- . ....++++. ++ .||+.... .+.++
T Consensus 139 ~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~--~-~~~~~i~~~~dg~~l~v~~~~--------~~~i~ 207 (333)
T 2dg1_A 139 DMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN--I-SVANGIALSTDEKVLWVTETT--------ANRLH 207 (333)
T ss_dssp EEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE--E-SSEEEEEECTTSSEEEEEEGG--------GTEEE
T ss_pred ceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC--C-CcccceEECCCCCEEEEEeCC--------CCeEE
Confidence 334444578888654321111235789999888776654210 1 111334443 33 58886532 24789
Q ss_pred EEeCCC
Q 013264 289 CYDPKT 294 (446)
Q Consensus 289 ~yd~~~ 294 (446)
+||+.+
T Consensus 208 ~~d~~~ 213 (333)
T 2dg1_A 208 RIALED 213 (333)
T ss_dssp EEEECT
T ss_pred EEEecC
Confidence 999864
No 70
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.58 E-value=2.9 Score=38.89 Aligned_cols=112 Identities=12% Similarity=0.200 Sum_probs=61.7
Q ss_pred EEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc--cCccceEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 161 AVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS--VARSFFACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 161 ~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p--~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
+..-++.+++.||.++ .+.+||. .+..|.....+. ....-.+++.-.+++..+.|+.+ ..+.+
T Consensus 23 ~~sp~g~~las~~~D~-------~i~iw~~--~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D------~~v~i 87 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDR-------RIRIWGT--EGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFD------ATTCI 87 (345)
T ss_dssp EECTTSSCEEEEETTS-------CEEEEEE--ETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETT------SCEEE
T ss_pred EECCCCCEEEEEcCCC-------eEEEEEc--CCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECC------CcEEE
Confidence 3334677777777653 4778888 667765332221 11112233333346667777754 45678
Q ss_pred EECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 239 YDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
||..++.+..+..+........+++.. ++++++.|+.++ .+..||+.+.
T Consensus 88 w~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~--------~v~iwd~~~~ 137 (345)
T 3fm0_A 88 WKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDK--------SVWVWEVDEE 137 (345)
T ss_dssp EEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEEECTT
T ss_pred EEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCC--------eEEEEECCCC
Confidence 888777766544333222222334433 456667776543 5888988765
No 71
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=92.56 E-value=0.96 Score=47.57 Aligned_cols=108 Identities=9% Similarity=0.100 Sum_probs=65.7
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CC--cEEEEEeccCCCCCCCCeEEEEEC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GA--STVCVAGGHDGQKNALKSAEVYDV 241 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d--~~iyv~GG~~~~~~~~~~~~~yd~ 241 (446)
++..++.||.++ .+.+||. .+..+..+..+........++.+ .+ +..++.|+.+ ..+.+||.
T Consensus 20 dg~~latg~~dg-------~I~vwd~--~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~D------g~I~vwd~ 84 (753)
T 3jro_A 20 YGKRLATCSSDK-------TIKIFEV--EGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKVLIWKE 84 (753)
T ss_dssp SSCCEEEEETTT-------EEEEEEE--ETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETT------SCEEEEEE
T ss_pred CCCeEEEEECCC-------cEEEEec--CCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCC------CeEEEEEC
Confidence 466666776543 5888888 65677666555433333333443 32 4566677654 46889999
Q ss_pred CCCcEEecCCCCccCCcceEEEEEC---CEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 242 EADEWRMLPEMDEERDECQGVCLEG---DRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 242 ~t~~W~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.+++|..+..+........++++.. +.+++.|+.++ .+..||..++
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg--------~I~vwdl~~~ 133 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG--------KVSVVEFKEN 133 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------EEEEEECCSS
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC--------cEEEEEeecC
Confidence 9998876654443333323444432 56677776543 6889998776
No 72
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=92.45 E-value=6 Score=35.74 Aligned_cols=137 Identities=19% Similarity=0.306 Sum_probs=71.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF- 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~- 210 (446)
.+.+||..+.+....-... .....+.....++.+++.|+.++ .+.+||. .+.+-... +.......
T Consensus 46 ~i~iw~~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d~-------~i~vwd~--~~~~~~~~--~~~~~~~v~ 111 (312)
T 4ery_A 46 LIKIWGAYDGKFEKTISGH---KLGISDVAWSSDSNLLVSASDDK-------TLKIWDV--SSGKCLKT--LKGHSNYVF 111 (312)
T ss_dssp CEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEETTS-------EEEEEET--TTCCEEEE--EECCSSCEE
T ss_pred eEEEEeCCCcccchhhccC---CCceEEEEEcCCCCEEEEECCCC-------EEEEEEC--CCCcEEEE--EcCCCCCEE
Confidence 3667787777665432211 11123333334667777777543 6889998 55543221 11111122
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
++....++.+++.|+.+ ..+.+||..+.+-... +........++++. ++++++.|+.++ .+..
T Consensus 112 ~~~~~~~~~~l~s~~~d------~~i~iwd~~~~~~~~~--~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~~ 175 (312)
T 4ery_A 112 CCNFNPQSNLIVSGSFD------ESVRIWDVKTGKCLKT--LPAHSDPVSAVHFNRDGSLIVSSSYDG--------LCRI 175 (312)
T ss_dssp EEEECSSSSEEEEEETT------SCEEEEETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CEEE
T ss_pred EEEEcCCCCEEEEEeCC------CcEEEEECCCCEEEEE--ecCCCCcEEEEEEcCCCCEEEEEeCCC--------cEEE
Confidence 22232335666777654 4678999887653322 11111111233332 456667776543 6899
Q ss_pred EeCCCCceE
Q 013264 290 YDPKTGSWS 298 (446)
Q Consensus 290 yd~~~~~W~ 298 (446)
||..+.+-.
T Consensus 176 wd~~~~~~~ 184 (312)
T 4ery_A 176 WDTASGQCL 184 (312)
T ss_dssp EETTTCCEE
T ss_pred EECCCCcee
Confidence 999887643
No 73
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=92.20 E-value=5.7 Score=34.89 Aligned_cols=166 Identities=10% Similarity=0.048 Sum_probs=87.4
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||+..+....+.... .......++..++.||+.... ...++++|. .+.......... ...-.+
T Consensus 88 ~i~~~d~~~~~~~~~~~~~---~~~p~~i~~~~~g~l~v~~~~-------~~~i~~~~~--~~~~~~~~~~~~-~~~p~~ 154 (270)
T 1rwi_B 88 RVVTLAAGSNNQTVLPFDG---LNYPEGLAVDTQGAVYVADRG-------NNRVVKLAA--GSKTQTVLPFTG-LNDPDG 154 (270)
T ss_dssp EEEEECTTCSCCEECCCCS---CSSEEEEEECTTCCEEEEEGG-------GTEEEEECT--TCCSCEECCCCS-CCSCCC
T ss_pred EEEEEeCCCceEeeeecCC---cCCCcceEECCCCCEEEEECC-------CCEEEEEEC--CCceeEeecccc-CCCcee
Confidence 4677888776554443221 112234444447789987542 346888988 555544332111 111233
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
+++..+++||+..... ..+.+||+.+..-........ ....++++. ++.||+.... .+.+.+|
T Consensus 155 i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~--~~p~~i~~d~~g~l~v~~~~--------~~~v~~~ 218 (270)
T 1rwi_B 155 VAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDI--TAPWGIAVDEAGTVYVTEHN--------TNQVVKL 218 (270)
T ss_dssp EEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSC--CSEEEEEECTTCCEEEEETT--------TSCEEEE
T ss_pred EEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccCC--CCceEEEECCCCCEEEEECC--------CCcEEEE
Confidence 4444457899876431 578999988776443321111 122345554 4588887642 2368999
Q ss_pred eCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 291 DPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 291 d~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
|+.+..-..... ........+.++. +++||+....+
T Consensus 219 ~~~~~~~~~~~~-------~~~~~p~~i~~~~---~g~l~v~~~~~ 254 (270)
T 1rwi_B 219 LAGSTTSTVLPF-------TGLNTPLAVAVDS---DRTVYVADRGN 254 (270)
T ss_dssp CTTCSCCEECCC-------CSCSCEEEEEECT---TCCEEEEEGGG
T ss_pred cCCCCcceeecc-------CCCCCceeEEECC---CCCEEEEECCC
Confidence 997764333221 1112223333332 24788886544
No 74
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=92.11 E-value=3.8 Score=39.40 Aligned_cols=143 Identities=13% Similarity=0.184 Sum_probs=68.6
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
++..++.|+.+ ..+.+||. .+.+-.. .+............. +..++.|+.+ ..+.+||..+.
T Consensus 288 ~~~~l~~~~~d-------~~i~i~d~--~~~~~~~--~~~~~~~~v~~~~~~-~~~l~~~~~d------g~i~vwd~~~~ 349 (445)
T 2ovr_B 288 DGIHVVSGSLD-------TSIRVWDV--ETGNCIH--TLTGHQSLTSGMELK-DNILVSGNAD------STVKIWDIKTG 349 (445)
T ss_dssp CSSEEEEEETT-------SCEEEEET--TTCCEEE--EECCCCSCEEEEEEE-TTEEEEEETT------SCEEEEETTTC
T ss_pred CCCEEEEEeCC-------CeEEEEEC--CCCCEEE--EEcCCcccEEEEEEe-CCEEEEEeCC------CeEEEEECCCC
Confidence 44444555433 34778888 5444222 111112222333344 4455666643 46889998776
Q ss_pred cEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCC
Q 013264 245 EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQ 324 (446)
Q Consensus 245 ~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~ 324 (446)
+-...-..+............++.+++.|+.++ .+..||..+++....-... ...........+.+..
T Consensus 350 ~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg--------~v~iwd~~~~~~~~~~~~~--~~~~~~~~v~~~~~s~-- 417 (445)
T 2ovr_B 350 QCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDG--------TVKLWDLKTGEFIRNLVTL--ESGGSGGVVWRIRASN-- 417 (445)
T ss_dssp CEEEEECSTTSCSSCEEEEEECSSEEEEEETTS--------EEEEEETTTCCEEEEEEEC--TTGGGTCEEEEEEECS--
T ss_pred cEEEEEccCCCCCCCEEEEEECCCEEEEEeCCC--------eEEEEECCCCceeeeeecc--ccCCCCceEEEEEecC--
Confidence 533221111111111223334566667776532 6999999988754321000 0011122222233332
Q ss_pred cccEEEEEcCCCCC
Q 013264 325 QHQWLWFLGKEQQQ 338 (446)
Q Consensus 325 ~~~~lyv~GG~~~~ 338 (446)
++.+++.|+.++.
T Consensus 418 -~~~~la~~~~dg~ 430 (445)
T 2ovr_B 418 -TKLVCAVGSRNGT 430 (445)
T ss_dssp -SEEEEEEECSSSS
T ss_pred -CEEEEEEcccCCC
Confidence 2577778887764
No 75
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=91.80 E-value=8.9 Score=36.34 Aligned_cols=142 Identities=8% Similarity=0.028 Sum_probs=71.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+.+-...-... .....+.+... ++.+|+.++.+ ..+.+||+ .+.+....-. ....-.
T Consensus 192 ~v~~~d~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~~~~~-------~~i~~~d~--~~~~~~~~~~--~~~~~~ 257 (433)
T 3bws_A 192 AVHVFDLKTLAYKATVDLT---GKWSKILLYDPIRDLVYCSNWIS-------EDISVIDR--KTKLEIRKTD--KIGLPR 257 (433)
T ss_dssp EEEEEETTTCCEEEEEECS---SSSEEEEEEETTTTEEEEEETTT-------TEEEEEET--TTTEEEEECC--CCSEEE
T ss_pred EEEEEECCCceEEEEEcCC---CCCeeEEEEcCCCCEEEEEecCC-------CcEEEEEC--CCCcEEEEec--CCCCce
Confidence 5678888776543321111 11122333322 45577776533 36899999 6665543322 222223
Q ss_pred EEEEECCcEEEEEeccCCCCC--CCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCc
Q 013264 211 ACAVVGASTVCVAGGHDGQKN--ALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~--~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~ 286 (446)
+++...+++.+++++...... .-..+.+||+.+.+-......+. . ..++++. ++.+|+.++.+ ..
T Consensus 258 ~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~--~-~~~~~~~~~g~~l~~~~~~~--------~~ 326 (433)
T 3bws_A 258 GLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG--N-KRHIVSGNTENKIYVSDMCC--------SK 326 (433)
T ss_dssp EEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE--C-EEEEEECSSTTEEEEEETTT--------TE
T ss_pred EEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC--C-cceEEECCCCCEEEEEecCC--------CE
Confidence 333333444444444322110 12588999998875443321111 1 1223332 33788887643 37
Q ss_pred EEEEeCCCCceE
Q 013264 287 AECYDPKTGSWS 298 (446)
Q Consensus 287 v~~yd~~~~~W~ 298 (446)
+..||+.+++-.
T Consensus 327 v~v~d~~~~~~~ 338 (433)
T 3bws_A 327 IEVYDLKEKKVQ 338 (433)
T ss_dssp EEEEETTTTEEE
T ss_pred EEEEECCCCcEE
Confidence 999999877543
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.60 E-value=0.28 Score=46.27 Aligned_cols=145 Identities=14% Similarity=0.188 Sum_probs=70.6
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
.++.+++.|+.++ .+.+||. .+..|..+..+........++.+ .+++.++.|+.+ ..+.+||..
T Consensus 21 ~~g~~l~~~~~d~-------~i~iw~~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d------~~v~vwd~~ 85 (377)
T 3dwl_C 21 SQRTEFVTTTATN-------QVELYEQ--DGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQD------RNAYVYEKR 85 (377)
T ss_dssp SSSSEEECCCSSS-------CBCEEEE--ETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETT------SSEEEC---
T ss_pred CCCCEEEEecCCC-------EEEEEEc--cCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCC------CeEEEEEcC
Confidence 4566777776543 4778888 77888877766544333333333 346666777653 467889988
Q ss_pred CCc-EEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc-eEEcccCCCCCCCCCCCceEEEE
Q 013264 243 ADE-WRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS-WSKFDHVWPFPSLSPRGSTATIT 319 (446)
Q Consensus 243 t~~-W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~~~~p~~~~~~r~~~~~~~ 319 (446)
++. |.....+........++++. ++++++.|+.++ .+..||..+++ |..+... ..+ .......+.
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~--------~i~iwd~~~~~~~~~~~~~---~~~-h~~~v~~~~ 153 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGAR--------VISVCYFEQENDWWVSKHL---KRP-LRSTILSLD 153 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSS--------CEEECCC-----CCCCEEE---CSS-CCSCEEEEE
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCEEEEEecCC--------eEEEEEECCcccceeeeEe---ecc-cCCCeEEEE
Confidence 876 54333222222221233332 456666666432 58889988765 4333321 111 122222333
Q ss_pred ecCCCcccEEEEEcCCCCC
Q 013264 320 SYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 320 ~~~~~~~~~lyv~GG~~~~ 338 (446)
+.. ++++++.|+.++.
T Consensus 154 ~~~---~~~~l~~~~~d~~ 169 (377)
T 3dwl_C 154 WHP---NNVLLAAGCADRK 169 (377)
T ss_dssp ECT---TSSEEEEEESSSC
T ss_pred EcC---CCCEEEEEeCCCE
Confidence 321 1467777776653
No 77
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=91.59 E-value=9.2 Score=36.03 Aligned_cols=95 Identities=7% Similarity=0.078 Sum_probs=49.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-ce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-FF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~~ 210 (446)
.+.+||..+++-...-... .....+.+..-++.+++.|+.++ .+.+||. .+.+- +..+..... -.
T Consensus 120 ~i~iwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~s~d~-------~i~iwd~--~~~~~--~~~~~~h~~~v~ 185 (420)
T 3vl1_A 120 DIKVLDSNFNLQREIDQAH---VSEITKLKFFPSGEALISSSQDM-------QLKIWSV--KDGSN--PRTLIGHRATVT 185 (420)
T ss_dssp CEEEECTTSCEEEEETTSS---SSCEEEEEECTTSSEEEEEETTS-------EEEEEET--TTCCC--CEEEECCSSCEE
T ss_pred CEEEEeCCCcceeeecccc---cCccEEEEECCCCCEEEEEeCCC-------eEEEEeC--CCCcC--ceEEcCCCCcEE
Confidence 4667777766544332111 12223333334666777776543 6889998 44431 111111111 22
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEW 246 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 246 (446)
+++...+++.++.|+.+ ..+.+||..+.+-
T Consensus 186 ~~~~~~~~~~l~s~~~d------~~v~iwd~~~~~~ 215 (420)
T 3vl1_A 186 DIAIIDRGRNVLSASLD------GTIRLWECGTGTT 215 (420)
T ss_dssp EEEEETTTTEEEEEETT------SCEEEEETTTTEE
T ss_pred EEEEcCCCCEEEEEcCC------CcEEEeECCCCce
Confidence 33344345666666653 4678999887753
No 78
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=91.53 E-value=5.5 Score=38.31 Aligned_cols=138 Identities=12% Similarity=0.155 Sum_probs=70.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-c
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-F 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~ 209 (446)
.+.+||..++.-..+-.+.. ....-.++... .++.+++.|+.++ .+.+||. .++....+........ .
T Consensus 143 ~i~lWd~~~~~~~~~~~~~g-H~~~V~~l~f~p~~~~~l~s~s~D~-------~v~iwd~--~~~~~~~~~~~~~~~~~~ 212 (435)
T 4e54_B 143 DIMLWNFGIKDKPTFIKGIG-AGGSITGLKFNPLNTNQFYASSMEG-------TTRLQDF--KGNILRVFASSDTINIWF 212 (435)
T ss_dssp CEEEECSSCCSCCEEECCCS-SSCCCCEEEECSSCTTEEEEECSSS-------CEEEEET--TSCEEEEEECCSSCSCCC
T ss_pred EEEEEECCCCCceeEEEccC-CCCCEEEEEEeCCCCCEEEEEeCCC-------EEEEeec--cCCceeEEeccCCCCccE
Confidence 36677776655333222221 11112233332 3566777777654 4788998 6666555433222211 2
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcE
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.++....++++++.|+.+ ..+.+||..+.. +..+........++++. +..+++.|+.++ .+
T Consensus 213 ~~~~~~~~~~~l~~g~~d------g~i~~wd~~~~~---~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~--------~v 275 (435)
T 4e54_B 213 CSLDVSASSRMVVTGDNV------GNVILLNMDGKE---LWNLRMHKKKVTHVALNPCCDWFLATASVDQ--------TV 275 (435)
T ss_dssp CCEEEETTTTEEEEECSS------SBEEEEESSSCB---CCCSBCCSSCEEEEEECTTCSSEEEEEETTS--------BC
T ss_pred EEEEECCCCCEEEEEeCC------CcEeeeccCcce---eEEEecccceEEeeeecCCCceEEEEecCcc--------ee
Confidence 233344446777777654 467889986543 22222211222233333 234666676542 57
Q ss_pred EEEeCCCCc
Q 013264 288 ECYDPKTGS 296 (446)
Q Consensus 288 ~~yd~~~~~ 296 (446)
..||+.+.+
T Consensus 276 ~iwd~~~~~ 284 (435)
T 4e54_B 276 KIWDLRQVR 284 (435)
T ss_dssp CEEETTTCC
T ss_pred eEEeccccc
Confidence 788887654
No 79
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=91.34 E-value=6 Score=41.31 Aligned_cols=135 Identities=11% Similarity=0.139 Sum_probs=69.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF- 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~- 210 (446)
.+.+||..+++....-... .....+.....++..+++|+.+ ..+.+||. .+.+.... +.......
T Consensus 36 ~v~iwd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~--~~~~~~~~--~~~~~~~v~ 101 (814)
T 3mkq_A 36 RVEIWNYETQVEVRSIQVT---ETPVRAGKFIARKNWIIVGSDD-------FRIRVFNY--NTGEKVVD--FEAHPDYIR 101 (814)
T ss_dssp EEEEEETTTTEEEEEEECC---SSCEEEEEEEGGGTEEEEEETT-------SEEEEEET--TTCCEEEE--EECCSSCEE
T ss_pred EEEEEECCCCceEEEEecC---CCcEEEEEEeCCCCEEEEEeCC-------CeEEEEEC--CCCcEEEE--EecCCCCEE
Confidence 4778888776544322111 1122334444566677777653 36889998 66654332 11111122
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC-cEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD-EWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v 287 (446)
+++...+++..+.|+.+ ..+.+||..++ ..... +........+++.. ++.+++.|+.+ ..+
T Consensus 102 ~~~~s~~~~~l~~~~~d------g~i~vw~~~~~~~~~~~--~~~~~~~v~~~~~~p~~~~~l~~~~~d--------g~v 165 (814)
T 3mkq_A 102 SIAVHPTKPYVLSGSDD------LTVKLWNWENNWALEQT--FEGHEHFVMCVAFNPKDPSTFASGCLD--------RTV 165 (814)
T ss_dssp EEEECSSSSEEEEEETT------SEEEEEEGGGTSEEEEE--EECCSSCEEEEEEETTEEEEEEEEETT--------SEE
T ss_pred EEEEeCCCCEEEEEcCC------CEEEEEECCCCceEEEE--EcCCCCcEEEEEEEcCCCCEEEEEeCC--------CeE
Confidence 23333345555666542 57889998765 32222 11111111344444 35677777653 268
Q ss_pred EEEeCCCCc
Q 013264 288 ECYDPKTGS 296 (446)
Q Consensus 288 ~~yd~~~~~ 296 (446)
..||..+.+
T Consensus 166 ~vwd~~~~~ 174 (814)
T 3mkq_A 166 KVWSLGQST 174 (814)
T ss_dssp EEEETTCSS
T ss_pred EEEECCCCc
Confidence 999987654
No 80
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=91.16 E-value=17 Score=38.20 Aligned_cols=141 Identities=9% Similarity=0.164 Sum_probs=81.5
Q ss_pred eEEEEECCCCcEEecCCCCCCCCcc-ceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccC-CccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMF-CQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKP-MSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~-~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~-~p~~r~~ 209 (446)
.+.+||+.+++...+..... .+.. ..+.+...++.|++... +.+++||+ .++++..... .+....-
T Consensus 108 Gl~~yd~~~~~f~~~~~~~~-~~~~~i~~i~~d~~g~lwi~t~---------~gl~~~~~--~~~~~~~~~~~~~~~~~i 175 (795)
T 4a2l_A 108 GLSRYDEEKDIFQNFFYEKN-GKHLQVNGIEEISPEQLLISTP---------EGLIMFDI--KESKFIDDSFSTAMHKTI 175 (795)
T ss_dssp CEEEEETTTTEEEEECCEET-TEECCCCEEEEEETTEEEEEET---------TEEEEEET--TTTEEECSSSCHHHHTCC
T ss_pred chheeCCCCCeEEecccccc-CCCceEEEEEECCCCCEEEEEC---------CceEEEEC--CCCEEEeccCCCCCCcce
Confidence 46789999998887654321 0100 22334445788888632 35899999 7787776543 1111102
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEE-EECCEEEEEeCCCCCCCCcccCcEE
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVC-LEGDRFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~v~ 288 (446)
.++....++.||+.. .. ..+.+||+.+++++.....+.... ..++. -.++.|++... .+.+.
T Consensus 176 ~~i~~d~~g~lwigt-~~------~Gl~~~~~~~~~~~~~~~~~~~~~-i~~i~~d~~g~lwigt~---------~~Gl~ 238 (795)
T 4a2l_A 176 ASTLYRQGDQIYIGT-ST------DGLYTYSITQKTFEKVIPILGTKQ-IQAILQQSPTRIWVATE---------GAGLF 238 (795)
T ss_dssp EEEEEEETTEEEEEE-SS------SCEEEEETTTCCEEECC----CCC-EEEEEEEETTEEEEEEB---------SSCEE
T ss_pred EEEEECCCCCEEEEE-CC------CCEEEEeCCCCeEEEecCCCCCCe-eEEEEEcCCCCEEEEEC---------CCCeE
Confidence 233333347888842 11 257899999999987643222111 12222 24678887531 12589
Q ss_pred EEeCCCCceEEcc
Q 013264 289 CYDPKTGSWSKFD 301 (446)
Q Consensus 289 ~yd~~~~~W~~~~ 301 (446)
.||+.++++....
T Consensus 239 ~~~~~~~~~~~~~ 251 (795)
T 4a2l_A 239 LINPKTKEIKNYL 251 (795)
T ss_dssp EEETTTTEEEEEC
T ss_pred EEeCCCCeEEEee
Confidence 9999999988765
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.87 E-value=4.1 Score=38.61 Aligned_cols=112 Identities=14% Similarity=0.111 Sum_probs=58.1
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEE-ccCCccCccceEEEEEC-CcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRR-VKPMSVARSFFACAVVG-ASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~-~~~~p~~r~~~~~~~~~-d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
++.+++.|+.++ .+.+||. .+..-.. +.. ....-.+++... +..+++.||...+ ..+.+||..
T Consensus 228 ~~~~l~s~~~d~-------~v~iwd~--~~~~~~~~~~~--~~~~v~~~~~~p~~~~ll~~~~gs~d----~~i~i~d~~ 292 (401)
T 4aez_A 228 DGLQLASGGNDN-------VVQIWDA--RSSIPKFTKTN--HNAAVKAVAWCPWQSNLLATGGGTMD----KQIHFWNAA 292 (401)
T ss_dssp TSSEEEEEETTS-------CEEEEET--TCSSEEEEECC--CSSCCCEEEECTTSTTEEEEECCTTT----CEEEEEETT
T ss_pred CCCEEEEEeCCC-------eEEEccC--CCCCccEEecC--CcceEEEEEECCCCCCEEEEecCCCC----CEEEEEECC
Confidence 566777776543 5889998 5443221 111 111112233332 2467777652222 578999988
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+.+-...-.... ...+++.. ++ .+++.+|... ..+..||..+.....+.
T Consensus 293 ~~~~~~~~~~~~---~v~~~~~s~~~~~l~~~~g~~d-------g~i~v~~~~~~~~~~~~ 343 (401)
T 4aez_A 293 TGARVNTVDAGS---QVTSLIWSPHSKEIMSTHGFPD-------NNLSIWSYSSSGLTKQV 343 (401)
T ss_dssp TCCEEEEEECSS---CEEEEEECSSSSEEEEEECTTT-------CEEEEEEEETTEEEEEE
T ss_pred CCCEEEEEeCCC---cEEEEEECCCCCeEEEEeecCC-------CcEEEEecCCccceeEE
Confidence 775443222111 11233332 33 4555545422 36899999887776654
No 82
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.78 E-value=9.1 Score=34.54 Aligned_cols=179 Identities=8% Similarity=0.004 Sum_probs=91.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCc-cceEEEEeeCCEEEEEeCcCCC----CCCccCeEEEEeCcCCCCcEEEc-cCCcc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPM-FCQCVAVPASRKLLLIGGWDPI----TLEPVPDVYVLDMVNNSSRWRRV-KPMSV 205 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~-~~~~~~~~~~~~lyv~GG~~~~----~~~~~~~v~~~d~~~~t~~W~~~-~~~p~ 205 (446)
.+..||+.+++++.+.......+. .....++.-++.+|+..-.... .......++++|+ .. +...+ ..+..
T Consensus 74 ~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~--~g-~~~~~~~~~~~ 150 (297)
T 3g4e_A 74 KFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFP--DH-HVKKYFDQVDI 150 (297)
T ss_dssp EEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECT--TS-CEEEEEEEESB
T ss_pred eEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEEC--CC-CEEEEeecccc
Confidence 578899999988876554321111 1233444457788874311110 0012357899998 43 33322 11111
Q ss_pred CccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEEC--CCCcEEe---cCCCCccCCcceEEEEE-CCEEEEEeCCCCC
Q 013264 206 ARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDV--EADEWRM---LPEMDEERDECQGVCLE-GDRFFVVSGYGTE 278 (446)
Q Consensus 206 ~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~--~t~~W~~---~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~ 278 (446)
..+.+...|+ .+|+.... ...+++||. .+.+... +..++.......++++. ++.||+....
T Consensus 151 ---pngi~~spdg~~lyv~~~~------~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~--- 218 (297)
T 3g4e_A 151 ---SNGLDWSLDHKIFYYIDSL------SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYN--- 218 (297)
T ss_dssp ---EEEEEECTTSCEEEEEEGG------GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEET---
T ss_pred ---ccceEEcCCCCEEEEecCC------CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcC---
Confidence 1234443334 68887643 256788875 4554421 11222111111344443 5689987532
Q ss_pred CCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 279 SQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 279 ~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
...|.+||+++++-...- +.|. .....+++.+ ...+.|||.....+.
T Consensus 219 -----~~~v~~~d~~tG~~~~~i-----~~p~--~~~t~~~f~g-~d~~~L~vt~~~~~~ 265 (297)
T 3g4e_A 219 -----GGRVIRLDPVTGKRLQTV-----KLPV--DKTTSCCFGG-KNYSEMYVTCARDGM 265 (297)
T ss_dssp -----TTEEEEECTTTCCEEEEE-----ECSS--SBEEEEEEES-GGGCEEEEEEBCTTC
T ss_pred -----CCEEEEEcCCCceEEEEE-----ECCC--CCceEEEEeC-CCCCEEEEEcCCcCC
Confidence 126999999987654332 1222 2334444542 122589998776543
No 83
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=90.73 E-value=9.1 Score=34.46 Aligned_cols=137 Identities=13% Similarity=0.253 Sum_probs=68.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+.+-... +.. ......+.....++.+++.|+.++ .+.+||. .+.+-.. .++.......
T Consensus 88 ~i~vwd~~~~~~~~~--~~~-~~~~v~~~~~~~~~~~l~s~~~d~-------~i~iwd~--~~~~~~~--~~~~~~~~v~ 153 (312)
T 4ery_A 88 TLKIWDVSSGKCLKT--LKG-HSNYVFCCNFNPQSNLIVSGSFDE-------SVRIWDV--KTGKCLK--TLPAHSDPVS 153 (312)
T ss_dssp EEEEEETTTCCEEEE--EEC-CSSCEEEEEECSSSSEEEEEETTS-------CEEEEET--TTCCEEE--EECCCSSCEE
T ss_pred EEEEEECCCCcEEEE--EcC-CCCCEEEEEEcCCCCEEEEEeCCC-------cEEEEEC--CCCEEEE--EecCCCCcEE
Confidence 466777776653221 110 011112233334566777777543 5889999 5554322 1221112222
Q ss_pred EEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 212 CAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 212 ~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
...+ .++++++.|+.+ ..+.+||..+.+-...-..... .....+++. +++.++.|+.+ ..+..
T Consensus 154 ~~~~~~~~~~l~~~~~d------~~i~~wd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~d--------~~i~i 218 (312)
T 4ery_A 154 AVHFNRDGSLIVSSSYD------GLCRIWDTASGQCLKTLIDDDN-PPVSFVKFSPNGKYILAATLD--------NTLKL 218 (312)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTCCEEEEECCSSC-CCEEEEEECTTSSEEEEEETT--------TEEEE
T ss_pred EEEEcCCCCEEEEEeCC------CcEEEEECCCCceeeEEeccCC-CceEEEEECCCCCEEEEEcCC--------CeEEE
Confidence 2333 346677777654 4678999987754322111111 111222332 44555666543 36899
Q ss_pred EeCCCCce
Q 013264 290 YDPKTGSW 297 (446)
Q Consensus 290 yd~~~~~W 297 (446)
||..+.+-
T Consensus 219 wd~~~~~~ 226 (312)
T 4ery_A 219 WDYSKGKC 226 (312)
T ss_dssp EETTTTEE
T ss_pred EECCCCcE
Confidence 99988754
No 84
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=90.71 E-value=5.9 Score=38.08 Aligned_cols=108 Identities=8% Similarity=0.018 Sum_probs=59.4
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc-cCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS-VARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p-~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
++.+++.|+.++ .+.+||. .+..-..+-.+. ....-.+++.. .++.+++.|+.+ ..+.+||..
T Consensus 131 ~~~~lasGs~dg-------~i~lWd~--~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D------~~v~iwd~~ 195 (435)
T 4e54_B 131 HPSTVAVGSKGG-------DIMLWNF--GIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSME------GTTRLQDFK 195 (435)
T ss_dssp CTTCEEEEETTS-------CEEEECS--SCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSS------SCEEEEETT
T ss_pred CCCEEEEEeCCC-------EEEEEEC--CCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCC------CEEEEeecc
Confidence 456777887654 4888998 555433322222 22222233332 235566666654 467889998
Q ss_pred CCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 243 ADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
++.-..+...........++.+ -++++++.|+.++ .+..||....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg--------~i~~wd~~~~ 241 (435)
T 4e54_B 196 GNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVG--------NVILLNMDGK 241 (435)
T ss_dssp SCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSS--------BEEEEESSSC
T ss_pred CCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCC--------cEeeeccCcc
Confidence 8766555332222111123333 3567777777543 6889998764
No 85
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.70 E-value=9.8 Score=34.80 Aligned_cols=167 Identities=9% Similarity=0.121 Sum_probs=82.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-ccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-RSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-r~~~ 210 (446)
.+.+||..+.+-...-... +....+.+..-++..++.|+.+ ..+.+||. .+.+-... +... ..-.
T Consensus 103 ~i~lWd~~~~~~~~~~~~~---~~~~~~~~~spdg~~l~~g~~d-------g~v~i~~~--~~~~~~~~--~~~~~~~v~ 168 (321)
T 3ow8_A 103 HIRLWDLENGKQIKSIDAG---PVDAWTLAFSPDSQYLATGTHV-------GKVNIFGV--ESGKKEYS--LDTRGKFIL 168 (321)
T ss_dssp EEEEEETTTTEEEEEEECC---TTCCCCEEECTTSSEEEEECTT-------SEEEEEET--TTCSEEEE--EECSSSCEE
T ss_pred cEEEEECCCCCEEEEEeCC---CccEEEEEECCCCCEEEEEcCC-------CcEEEEEc--CCCceeEE--ecCCCceEE
Confidence 4567777766543211111 1111223333566777777653 35788888 54442211 1111 1122
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++...+++.++.|+.+ ..+.+||..+.+-... +........++++. ++++++.|+.++ .+..
T Consensus 169 ~~~~spdg~~lasg~~d------g~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spd~~~l~s~s~dg--------~i~i 232 (321)
T 3ow8_A 169 SIAYSPDGKYLASGAID------GIINIFDIATGKLLHT--LEGHAMPIRSLTFSPDSQLLVTASDDG--------YIKI 232 (321)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTTEEEEE--ECCCSSCCCEEEECTTSCEEEEECTTS--------CEEE
T ss_pred EEEECCCCCEEEEEcCC------CeEEEEECCCCcEEEE--EcccCCceeEEEEcCCCCEEEEEcCCC--------eEEE
Confidence 33333356777777654 4688999988754322 11111111233333 567777777543 5899
Q ss_pred EeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 290 YDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 290 yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
||..+.+-...- .........+.+.. ++.+++.|+.++.
T Consensus 233 wd~~~~~~~~~~-------~~h~~~v~~~~~sp---~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 233 YDVQHANLAGTL-------SGHASWVLNVAFCP---DDTHFVSSSSDKS 271 (321)
T ss_dssp EETTTCCEEEEE-------CCCSSCEEEEEECT---TSSEEEEEETTSC
T ss_pred EECCCcceeEEE-------cCCCCceEEEEECC---CCCEEEEEeCCCc
Confidence 999877643321 11112222333321 1467777777653
No 86
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=90.57 E-value=8.2 Score=36.38 Aligned_cols=109 Identities=11% Similarity=0.066 Sum_probs=56.8
Q ss_pred EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccC-CccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc
Q 013264 167 KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKP-MSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE 245 (446)
Q Consensus 167 ~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~-~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 245 (446)
.+++.|+.++ .+.+||. .+.+....-. ......-.+++...+++.++.|+.+ ..+.+||+.+.+
T Consensus 145 ~~l~s~~~dg-------~i~iwd~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d------~~i~iwd~~~~~ 209 (402)
T 2aq5_A 145 NVLLSAGCDN-------VILVWDV--GTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD------KRVRVIEPRKGT 209 (402)
T ss_dssp TEEEEEETTS-------CEEEEET--TTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT------SEEEEEETTTTE
T ss_pred CEEEEEcCCC-------EEEEEEC--CCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC------CcEEEEeCCCCc
Confidence 4777776543 5889999 6665432211 1112222233333346666776643 578999998876
Q ss_pred EEecC-CCCccCCcceEEE-EECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 246 WRMLP-EMDEERDECQGVC-LEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 246 W~~~~-~~~~~r~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
-...- ........ ..++ .-++++++.|.... ....+..||..+..
T Consensus 210 ~~~~~~~~~~~~~~-~~~~~~~~~~~l~~g~~~~-----~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 210 VVAEKDRPHEGTRP-VHAVFVSEGKILTTGFSRM-----SERQVALWDTKHLE 256 (402)
T ss_dssp EEEEEECSSCSSSC-CEEEECSTTEEEEEEECTT-----CCEEEEEEETTBCS
T ss_pred eeeeeccCCCCCcc-eEEEEcCCCcEEEEeccCC-----CCceEEEEcCcccc
Confidence 44321 11111111 2233 33667766662111 12378999998754
No 87
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=90.51 E-value=5.3 Score=35.12 Aligned_cols=146 Identities=10% Similarity=0.019 Sum_probs=81.3
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCC-CcEEEccCCccCcc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNS-SRWRRVKPMSVARS 208 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t-~~W~~~~~~p~~r~ 208 (446)
...+.+||..+++...+.... ....+....-+++.+++++ ...++++|. .+ .+...+........
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~----~~v~~~~~spdg~~l~~~~--------~~~i~~~d~--~~~~~~~~~~~~~~~~~ 86 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTP----ELFEAPNWSPDGKYLLLNS--------EGLLYRLSL--AGDPSPEKVDTGFATIC 86 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEES----SCCEEEEECTTSSEEEEEE--------TTEEEEEES--SSCCSCEECCCTTCCCB
T ss_pred ceeEEEEeCCCCceeeeccCC----cceEeeEECCCCCEEEEEc--------CCeEEEEeC--CCCCCceEecccccccc
Confidence 346889999988877654433 1223344445666666654 236999999 77 66666644332222
Q ss_pred ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCc
Q 013264 209 FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~ 286 (446)
...++...|++.+++++.... ....++.+|..+.+-..+..... . ..++.. ++ .|++.++.++ ...
T Consensus 87 ~~~~~~spdg~~l~~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~---~-~~~~~spdg~~l~~~~~~~~------~~~ 154 (297)
T 2ojh_A 87 NNDHGISPDGALYAISDKVEF--GKSAIYLLPSTGGTPRLMTKNLP---S-YWHGWSPDGKSFTYCGIRDQ------VFD 154 (297)
T ss_dssp CSCCEECTTSSEEEEEECTTT--SSCEEEEEETTCCCCEECCSSSS---E-EEEEECTTSSEEEEEEEETT------EEE
T ss_pred ccceEECCCCCEEEEEEeCCC--CcceEEEEECCCCceEEeecCCC---c-cceEECCCCCEEEEEECCCC------ceE
Confidence 222333334555555553322 23688999988877665543322 1 233333 33 4555554322 125
Q ss_pred EEEEeCCCCceEEcc
Q 013264 287 AECYDPKTGSWSKFD 301 (446)
Q Consensus 287 v~~yd~~~~~W~~~~ 301 (446)
++.+|..++....+.
T Consensus 155 l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 155 IYSMDIDSGVETRLT 169 (297)
T ss_dssp EEEEETTTCCEEECC
T ss_pred EEEEECCCCcceEcc
Confidence 777778777776655
No 88
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=90.27 E-value=10 Score=34.95 Aligned_cols=168 Identities=14% Similarity=0.250 Sum_probs=80.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc--EEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR--WRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~--W~~~~~~p~~r~~ 209 (446)
.+.+||..+.+-...-... .....+++...++.+++.||.++ .+.+||. .+.. ......+......
T Consensus 78 ~v~iWd~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~s~~~d~-------~v~iw~~--~~~~~~~~~~~~~~~h~~~ 145 (340)
T 1got_B 78 KLIIWDSYTTNKVHAIPLR---SSWVMTCAYAPSGNYVACGGLDN-------ICSIYNL--KTREGNVRVSRELAGHTGY 145 (340)
T ss_dssp EEEEEETTTCCEEEEEECS---SSCEEEEEECTTSSEEEEEETTC-------EEEEEET--TTCSBSCEEEEEEECCSSC
T ss_pred cEEEEECCCCCcceEeecC---CccEEEEEECCCCCEEEEEeCCC-------eEEEEEC--ccCCCcceeEEEecCCCcc
Confidence 4667777665533221111 11122333334667777777543 5788888 4432 1211111111111
Q ss_pred -eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcE
Q 013264 210 -FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 210 -~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.++....++++ +.|+.+ ..+.+||..+.+-... +........++++. ++.+++.|+.++ .+
T Consensus 146 v~~~~~~~~~~l-~s~s~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sg~~d~--------~v 208 (340)
T 1got_B 146 LSCCRFLDDNQI-VTSSGD------TTCALWDIETGQQTTT--FTGHTGDVMSLSLAPDTRLFVSGACDA--------SA 208 (340)
T ss_dssp EEEEEEEETTEE-EEEETT------SCEEEEETTTTEEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CE
T ss_pred EEEEEECCCCcE-EEEECC------CcEEEEECCCCcEEEE--EcCCCCceEEEEECCCCCEEEEEeCCC--------cE
Confidence 22233334564 444432 4688999988764422 11111111233333 456777777543 68
Q ss_pred EEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 288 ECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 288 ~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
..||+.++.-...- .........+.+.. ++.+++.|+.++.
T Consensus 209 ~~wd~~~~~~~~~~-------~~h~~~v~~v~~~p---~~~~l~s~s~d~~ 249 (340)
T 1got_B 209 KLWDVREGMCRQTF-------TGHESDINAICFFP---NGNAFATGSDDAT 249 (340)
T ss_dssp EEEETTTCSEEEEE-------CCCSSCEEEEEECT---TSSEEEEEETTSC
T ss_pred EEEECCCCeeEEEE-------cCCcCCEEEEEEcC---CCCEEEEEcCCCc
Confidence 89999876533221 01112222233321 1467788877654
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=90.11 E-value=5.8 Score=37.57 Aligned_cols=135 Identities=16% Similarity=0.181 Sum_probs=73.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+++........ ......+++..-++.+++.|+.++ .+.+||. .+.+-... +........
T Consensus 114 ~v~lw~~~~~~~~~~~~~~--~~~~v~~v~~s~~~~~l~~~~~dg-------~i~iwd~--~~~~~~~~--~~~~~~~v~ 180 (401)
T 4aez_A 114 NVYVWNADSGSVSALAETD--ESTYVASVKWSHDGSFLSVGLGNG-------LVDIYDV--ESQTKLRT--MAGHQARVG 180 (401)
T ss_dssp EEEEEETTTCCEEEEEECC--TTCCEEEEEECTTSSEEEEEETTS-------CEEEEET--TTCCEEEE--ECCCSSCEE
T ss_pred eEEEeeCCCCcEeEeeecC--CCCCEEEEEECCCCCEEEEECCCC-------eEEEEEC--cCCeEEEE--ecCCCCceE
Confidence 5778898888876654443 122223333334667777776543 5889998 55543322 222222333
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcE--EecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEW--RMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W--~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~ 288 (446)
+...+ +.+++.|+.+ ..+.+||..+..- ..+... .....++++. ++.+++.|+.++ .+.
T Consensus 181 ~~~~~-~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~s~~~d~--------~v~ 242 (401)
T 4aez_A 181 CLSWN-RHVLSSGSRS------GAIHHHDVRIANHQIGTLQGH---SSEVCGLAWRSDGLQLASGGNDN--------VVQ 242 (401)
T ss_dssp EEEEE-TTEEEEEETT------SEEEEEETTSSSCEEEEEECC---SSCEEEEEECTTSSEEEEEETTS--------CEE
T ss_pred EEEEC-CCEEEEEcCC------CCEEEEecccCcceeeEEcCC---CCCeeEEEEcCCCCEEEEEeCCC--------eEE
Confidence 44445 5566666643 5788999874321 111111 1111233333 556677776542 689
Q ss_pred EEeCCCCce
Q 013264 289 CYDPKTGSW 297 (446)
Q Consensus 289 ~yd~~~~~W 297 (446)
.||..+.+-
T Consensus 243 iwd~~~~~~ 251 (401)
T 4aez_A 243 IWDARSSIP 251 (401)
T ss_dssp EEETTCSSE
T ss_pred EccCCCCCc
Confidence 999987643
No 90
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=90.00 E-value=11 Score=34.39 Aligned_cols=111 Identities=17% Similarity=0.214 Sum_probs=60.5
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-ceEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-FFACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
.+...+++.++.|+.++ .+.+||. .+.+-.. .+..... -.+++...++++++.|+.+ ..+.+
T Consensus 170 ~~~spdg~~lasg~~dg-------~i~iwd~--~~~~~~~--~~~~h~~~v~~l~~spd~~~l~s~s~d------g~i~i 232 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDG-------IINIFDI--ATGKLLH--TLEGHAMPIRSLTFSPDSQLLVTASDD------GYIKI 232 (321)
T ss_dssp EEECTTSSEEEEEETTS-------CEEEEET--TTTEEEE--EECCCSSCCCEEEECTTSCEEEEECTT------SCEEE
T ss_pred EEECCCCCEEEEEcCCC-------eEEEEEC--CCCcEEE--EEcccCCceeEEEEcCCCCEEEEEcCC------CeEEE
Confidence 33445677777777543 5889999 6554322 1211111 1233333446777777654 46889
Q ss_pred EECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 239 YDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
||..+.+-... +........++++. ++.+++.|+.++ .+..||+.+.+-
T Consensus 233 wd~~~~~~~~~--~~~h~~~v~~~~~sp~~~~l~s~s~D~--------~v~iwd~~~~~~ 282 (321)
T 3ow8_A 233 YDVQHANLAGT--LSGHASWVLNVAFCPDDTHFVSSSSDK--------SVKVWDVGTRTC 282 (321)
T ss_dssp EETTTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTTEE
T ss_pred EECCCcceeEE--EcCCCCceEEEEECCCCCEEEEEeCCC--------cEEEEeCCCCEE
Confidence 99887654322 11111111233333 456666776543 689999987754
No 91
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=89.86 E-value=10 Score=33.65 Aligned_cols=172 Identities=9% Similarity=0.073 Sum_probs=88.4
Q ss_pred eEEEEECCCCcEEecCCCCCC--CCccceEEEE-eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc
Q 013264 132 GLTIFNASNGTWERIRPHVGR--IPMFCQCVAV-PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~--~p~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~ 208 (446)
.+..||+..+.-..+...... ........++ ..++.|||.+.. ....+.+||+ ....-..+.... ...
T Consensus 52 ~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~------~~~~i~~~d~--~g~~~~~~~~~~-~~~ 122 (286)
T 1q7f_A 52 RIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS------PTHQIQIYNQ--YGQFVRKFGATI-LQH 122 (286)
T ss_dssp EEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG------GGCEEEEECT--TSCEEEEECTTT-CSC
T ss_pred EEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC------CCCEEEEECC--CCcEEEEecCcc-CCC
Confidence 577888875544444321100 0011233333 247899998642 1346899998 555444442211 112
Q ss_pred ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcE
Q 013264 209 FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v 287 (446)
-.++++..++++||.... ...+.+||+....-..+...... ....++++. ++.+|+.... .+.+
T Consensus 123 ~~~i~~~~~g~l~v~~~~------~~~i~~~~~~g~~~~~~~~~~~~-~~p~~i~~~~~g~l~v~~~~--------~~~i 187 (286)
T 1q7f_A 123 PRGVTVDNKGRIIVVECK------VMRVIIFDQNGNVLHKFGCSKHL-EFPNGVVVNDKQEIFISDNR--------AHCV 187 (286)
T ss_dssp EEEEEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECTTTC-SSEEEEEECSSSEEEEEEGG--------GTEE
T ss_pred ceEEEEeCCCCEEEEECC------CCEEEEEcCCCCEEEEeCCCCcc-CCcEEEEECCCCCEEEEECC--------CCEE
Confidence 234444445789987542 25789999876554444211111 111344443 4789987642 3479
Q ss_pred EEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 288 ECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 288 ~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
.+||+....-..+.. . ........+.++. +++|||....+
T Consensus 188 ~~~~~~g~~~~~~~~----~--g~~~~p~~i~~d~---~G~l~v~~~~~ 227 (286)
T 1q7f_A 188 KVFNYEGQYLRQIGG----E--GITNYPIGVGINS---NGEILIADNHN 227 (286)
T ss_dssp EEEETTCCEEEEESC----T--TTSCSEEEEEECT---TCCEEEEECSS
T ss_pred EEEcCCCCEEEEEcc----C--CccCCCcEEEECC---CCCEEEEeCCC
Confidence 999987665444432 1 0011222333332 25788887554
No 92
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.71 E-value=12 Score=35.45 Aligned_cols=136 Identities=15% Similarity=0.197 Sum_probs=71.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.++|..+++-..+-.+.. ....-.+++..-++..++.|+.++ .+.+||. .+.+-.. .+........
T Consensus 126 tV~lWd~~tg~~~~~~~~~~-~~~~V~sv~fspdg~~lasgs~Dg-------~v~iWd~--~~~~~~~--~~~~h~~~v~ 193 (420)
T 4gga_A 126 SVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDV--QQQKRLR--NMTSHSARVG 193 (420)
T ss_dssp EEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETTS-------CEEEEET--TTTEEEE--EECCCSSCEE
T ss_pred EEEEEECCCCCEEEEEEecC-CCCcEEEEEECCCCCEEEEEECCC-------eEEEEEc--CCCcEEE--EEeCCCCceE
Confidence 57889999988776544432 111223344445677888887654 5889999 5554322 2222222333
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEE-EEECCEEEEEeCCCCCCCCcccCcEEEE
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGV-CLEGDRFFVVSGYGTESQGRFKPDAECY 290 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~v~~y 290 (446)
+...+ +.+.+.|+.+ ..+..+|..+....... +.......... ...++...+.|+.++ .+..+
T Consensus 194 ~~s~~-~~~l~sgs~d------~~i~~~d~~~~~~~~~~-~~~h~~~~~~~~~~~~g~~l~s~~~D~--------~v~i~ 257 (420)
T 4gga_A 194 SLSWN-SYILSSGSRS------GHIHHHDVRVAEHHVAT-LSGHSQEVCGLRWAPDGRHLASGGNDN--------LVNVW 257 (420)
T ss_dssp EEEEE-TTEEEEEETT------SEEEEEETTSSSCEEEE-EECCSSCEEEEEECTTSSEEEEEETTS--------CEEEE
T ss_pred EEeeC-CCEEEEEeCC------CceeEeeecccceeeEE-ecccccceeeeeecCCCCeeeeeeccc--------cceEE
Confidence 44555 5676777653 46677887654332111 11111110112 222445555565432 57778
Q ss_pred eCCCC
Q 013264 291 DPKTG 295 (446)
Q Consensus 291 d~~~~ 295 (446)
|..++
T Consensus 258 ~~~~~ 262 (420)
T 4gga_A 258 PSAPG 262 (420)
T ss_dssp ESSCC
T ss_pred eeccc
Confidence 87665
No 93
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.62 E-value=4.1 Score=37.49 Aligned_cols=115 Identities=16% Similarity=0.257 Sum_probs=61.6
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEEC-C--cEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG-A--STVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~-d--~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
-++.+++.|+.++ .+.+||. .+..|..+..+.........+.+. + +...+.|+.+ ..+.+||
T Consensus 163 p~~~~l~s~s~D~-------~i~iW~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D------~~v~iw~ 227 (330)
T 2hes_X 163 PSEALLASSSYDD-------TVRIWKD--YDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDD------STVRVWK 227 (330)
T ss_dssp SSSSEEEEEETTS-------CEEEEEE--ETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEEcCCC-------eEEEEEC--CCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCC------CeEEEEE
Confidence 3566777777653 4778888 666676554443222222222232 2 3445555543 3456666
Q ss_pred CCC------CcEEecCCCCcc-CCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 241 VEA------DEWRMLPEMDEE-RDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 241 ~~t------~~W~~~~~~~~~-r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
..+ ..|.....++.. .....+++...+.+++.||.++ .+..||..++.|..+.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg--------~v~iw~~~~~~~~~~~ 287 (330)
T 2hes_X 228 YMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADG--------VLAVYEEVDGEWKVFA 287 (330)
T ss_dssp EEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTS--------CEEEEEEETTEEEEEE
T ss_pred ecCCCccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCC--------EEEEEEcCCCceEEEe
Confidence 533 246554433321 1112344444455666666543 6889999888887654
No 94
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=89.43 E-value=11 Score=33.66 Aligned_cols=142 Identities=10% Similarity=0.093 Sum_probs=76.3
Q ss_pred eEEEEECCCCcEEecCCCCC-CCCccceEEEEeeC-CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc-cCCccC--
Q 013264 132 GLTIFNASNGTWERIRPHVG-RIPMFCQCVAVPAS-RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV-KPMSVA-- 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~-~~p~~~~~~~~~~~-~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~-~~~p~~-- 206 (446)
.+..||+.++++..+..... .......+.+...+ +.||+.... +.+++||+ . .+...+ ......
T Consensus 47 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~--------~~l~~~d~--~-g~~~~~~~~~~~~~~ 115 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR--------LGLLVVQT--D-GTFEEIAKKDSEGRR 115 (314)
T ss_dssp EEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT--------TEEEEEET--T-SCEEECCSBCTTSCB
T ss_pred EEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC--------CCEEEEeC--C-CCEEEEEeccCCCcc
Confidence 57889998888876543100 00111234444345 789987641 25899999 6 666655 322111
Q ss_pred -ccceEEEEECCcEEEEEeccCC---------CCCCCCeEEEEECCCCcEEecC-CCCccCCcceEEEEE-----CC-EE
Q 013264 207 -RSFFACAVVGASTVCVAGGHDG---------QKNALKSAEVYDVEADEWRMLP-EMDEERDECQGVCLE-----GD-RF 269 (446)
Q Consensus 207 -r~~~~~~~~~d~~iyv~GG~~~---------~~~~~~~~~~yd~~t~~W~~~~-~~~~~r~~~~~~~~~-----~~-~l 269 (446)
..-..++...++++|+...... .......+++||+. .+...+. ....+ .++++. ++ .|
T Consensus 116 ~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~----~~i~~~~~~d~dg~~l 190 (314)
T 1pjx_A 116 MQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP----NGIAVRHMNDGRPYQL 190 (314)
T ss_dssp CBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE----EEEEEEECTTSCEEEE
T ss_pred ccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc----ceEEEecccCCCCCEE
Confidence 1223444444578998764321 11112578899986 5555432 11111 334444 33 57
Q ss_pred EEEeCCCCCCCCcccCcEEEEeCC-CCce
Q 013264 270 FVVSGYGTESQGRFKPDAECYDPK-TGSW 297 (446)
Q Consensus 270 yv~GG~~~~~~~~~~~~v~~yd~~-~~~W 297 (446)
|+.... .+.+.+||+. +++.
T Consensus 191 ~v~~~~--------~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 191 IVAETP--------TKKLWSYDIKGPAKI 211 (314)
T ss_dssp EEEETT--------TTEEEEEEEEETTEE
T ss_pred EEEECC--------CCeEEEEECCCCCcc
Confidence 776542 2368999976 4544
No 95
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=89.31 E-value=9.9 Score=34.84 Aligned_cols=110 Identities=5% Similarity=0.107 Sum_probs=56.0
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
.++..++.|+.++ .+.+||.......++.+..+.........+.+ .++.+++.|+.+ ..+.+||..
T Consensus 117 p~g~~las~s~D~-------~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D------~~i~iW~~~ 183 (330)
T 2hes_X 117 NDGYYLATCSRDK-------SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYD------DTVRIWKDY 183 (330)
T ss_dssp TTSCEEEEEETTS-------CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETT------SCEEEEEEE
T ss_pred CCCCEEEEEeCCC-------EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCC------CeEEEEECC
Confidence 4567777777543 47788871112334433333222222223333 245666777654 467788887
Q ss_pred CCcEEecCCCCccCCcceEEEEEC---CEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 243 ADEWRMLPEMDEERDECQGVCLEG---DRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
++.|..+..+........++.+.. +...+.|+.++ .+..||..+
T Consensus 184 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~--------~v~iw~~~~ 230 (330)
T 2hes_X 184 DDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDS--------TVRVWKYMG 230 (330)
T ss_dssp TTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTS--------CEEEEEEEE
T ss_pred CCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCC--------eEEEEEecC
Confidence 877776544432222212333332 34455666432 466776643
No 96
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=89.31 E-value=2.8 Score=38.42 Aligned_cols=118 Identities=10% Similarity=0.093 Sum_probs=60.8
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
.++.+|+.++. ...++++|+ .+.+....-..+.....+.++...|+ .+|+.+.. ...+.+||+.
T Consensus 9 ~~~~~~v~~~~-------~~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~------~~~i~~~d~~ 73 (349)
T 1jmx_B 9 AGHEYMIVTNY-------PNNLHVVDV--ASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNH------YGDIYGIDLD 73 (349)
T ss_dssp TTCEEEEEEET-------TTEEEEEET--TTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETT------TTEEEEEETT
T ss_pred CCCEEEEEeCC-------CCeEEEEEC--CCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCC------CCcEEEEeCC
Confidence 56788888764 346999999 66665433222221122344444444 57877642 2578999998
Q ss_pred CCcEEecCCCCcc----CCcceEEEEE-CC-EEEEEeCC---CCCCCCcccCcEEEEeCCCCc
Q 013264 243 ADEWRMLPEMDEE----RDECQGVCLE-GD-RFFVVSGY---GTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 243 t~~W~~~~~~~~~----r~~~~~~~~~-~~-~lyv~GG~---~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+++-...-..+.. .....++++. ++ .||+.+.. ...........+.+||+++++
T Consensus 74 t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 74 TCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp TTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred CCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 8865432222110 0001233333 33 66665421 000000012479999998743
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=89.10 E-value=15 Score=34.52 Aligned_cols=111 Identities=16% Similarity=0.145 Sum_probs=59.4
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEE-----EccCCccCccce-EEEEECCc-EEEEEeccCCCCCCCCeEE
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWR-----RVKPMSVARSFF-ACAVVGAS-TVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~-----~~~~~p~~r~~~-~~~~~~d~-~iyv~GG~~~~~~~~~~~~ 237 (446)
++.+++.|+.++ .+.+||. .+.... .+..+....... +++...++ .+++.|+.+ ..+.
T Consensus 93 ~~~~l~s~s~dg-------~v~vw~~--~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~ 157 (402)
T 2aq5_A 93 NDNVIASGSEDC-------TVMVWEI--PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCD------NVIL 157 (402)
T ss_dssp CTTEEEEEETTS-------EEEEEEC--CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETT------SCEE
T ss_pred CCCEEEEEeCCC-------eEEEEEc--cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCC------CEEE
Confidence 667788877543 5888998 555331 111111111222 23333333 466777654 4688
Q ss_pred EEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE
Q 013264 238 VYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
+||..+++....-..........+++.. ++.+++.|+.+ ..+..||+.+++-.
T Consensus 158 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~iwd~~~~~~~ 211 (402)
T 2aq5_A 158 VWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRD--------KRVRVIEPRKGTVV 211 (402)
T ss_dssp EEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETT--------SEEEEEETTTTEEE
T ss_pred EEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecC--------CcEEEEeCCCCcee
Confidence 9999888654322101111111333443 55666666643 36999999887643
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.09 E-value=15 Score=34.42 Aligned_cols=111 Identities=8% Similarity=0.102 Sum_probs=58.1
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC----ccce-EEEEECCc-EEEEEeccCCCCCCCCeEEEE
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA----RSFF-ACAVVGAS-TVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~----r~~~-~~~~~~d~-~iyv~GG~~~~~~~~~~~~~y 239 (446)
+.+++.|+.++ .+.+||. .+.+-...-..+.. .... +++...++ .+++.|+.++.. ..+.+|
T Consensus 178 ~~~l~~~~~dg-------~v~iwd~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---~~i~~~ 245 (416)
T 2pm9_A 178 AHVFASAGSSN-------FASIWDL--KAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND---PSILIW 245 (416)
T ss_dssp TTEEEEESSSS-------CEEEEET--TTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS---CCCCEE
T ss_pred CcEEEEEcCCC-------CEEEEEC--CCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCC---ceEEEE
Confidence 56777777543 5889999 66554333222211 2222 33333333 466776654321 367889
Q ss_pred ECCCCcEEecCCCC-ccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 240 DVEADEWRMLPEMD-EERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 240 d~~t~~W~~~~~~~-~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
|..+..- .+..+. .......++++. ++.+++.|+.++ .+..||+.+.+-
T Consensus 246 d~~~~~~-~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg--------~v~~wd~~~~~~ 297 (416)
T 2pm9_A 246 DLRNANT-PLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDN--------TVLLWNPESAEQ 297 (416)
T ss_dssp ETTSTTS-CSBCCCSCCSSCEEEEEECSSCSSCEEEEESSS--------EEEEECSSSCCE
T ss_pred eCCCCCC-CcEEeecCccCceeEEEeCCCCCCeEEEEeCCC--------CEEEeeCCCCcc
Confidence 9887531 111121 111111334443 567777777532 689999987653
No 99
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=88.85 E-value=15 Score=34.13 Aligned_cols=142 Identities=12% Similarity=0.051 Sum_probs=69.5
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEEC--CcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG--ASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~--d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
..+++.|+.++ .+.+||. .+.+-...-..........++.+. ++++++.|+.+ ..+.+||..+
T Consensus 182 ~~~l~s~s~D~-------~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~ 246 (344)
T 4gqb_B 182 DSVFLSCSEDN-------RILLWDT--RCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKS 246 (344)
T ss_dssp TTEEEEEETTS-------CEEEEET--TSSSCEEECC----CCCEEEEEECSSCTTEEEEEETT------SEEEEEESCC
T ss_pred CCceeeecccc-------ccccccc--cccceeeeeecceeeccceeeeecCCCCcceEEeccC------CcEEEEECCC
Confidence 35777777543 4888999 555433221111111112222222 35677777653 4688999876
Q ss_pred CcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEec
Q 013264 244 DEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSY 321 (446)
Q Consensus 244 ~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~ 321 (446)
.+ .+..+........++++. ++ ++.+.|+.++ .+..||..+++-..+. ........+.+.
T Consensus 247 ~~--~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~--------~i~vwd~~~~~~~~~~--------~H~~~V~~v~~s 308 (344)
T 4gqb_B 247 TS--CVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC--------SLAVLDSSLSELFRSQ--------AHRDFVRDATWS 308 (344)
T ss_dssp ----CCEEEECCSSCEEEEEECSSSSCCEEEEETTS--------CEEEECTTCCEEEEEC--------CCSSCEEEEEEC
T ss_pred Cc--EEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC--------eEEEEECCCCcEEEEc--------CCCCCEEEEEEe
Confidence 53 121111111111233443 33 5666666542 6899999887643332 111223333332
Q ss_pred -CCCcccEEEEEcCCCCCCceeEece
Q 013264 322 -RLQQHQWLWFLGKEQQQNGEVVKGK 346 (446)
Q Consensus 322 -~~~~~~~lyv~GG~~~~~~~~~~W~ 346 (446)
+ +..|++.||.++ ....|.
T Consensus 309 p~---~~~llas~s~D~---~v~~w~ 328 (344)
T 4gqb_B 309 PL---NHSLLTTVGWDH---QVVHHV 328 (344)
T ss_dssp SS---STTEEEEEETTS---CEEEEE
T ss_pred CC---CCeEEEEEcCCC---eEEEEE
Confidence 2 135777788765 355564
No 100
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=88.80 E-value=21 Score=36.10 Aligned_cols=153 Identities=12% Similarity=0.056 Sum_probs=82.9
Q ss_pred eeEEEEECCC------CcEEecC-CCCCCCCccceEEEEeeCCEEEEEeCcCCCCCC-ccCeEEEEeCcCC-CC---cEE
Q 013264 131 YGLTIFNASN------GTWERIR-PHVGRIPMFCQCVAVPASRKLLLIGGWDPITLE-PVPDVYVLDMVNN-SS---RWR 198 (446)
Q Consensus 131 ~~~~~ydp~~------~~W~~l~-~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~-~~~~v~~~d~~~~-t~---~W~ 198 (446)
..++.+|..+ ++-..+. .-. .........-+++..++...+..... ...+++++|. . +. ..+
T Consensus 161 ~~i~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~--~~~g~~~~~~ 234 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSAVRELSDDAH----RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARV--TEDGRFADTR 234 (662)
T ss_dssp EEEEEEETTSTTTTCGGGSEESSCSCS----SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEE--CTTSCEEEEE
T ss_pred eEEEEEECCCCccccCCceeEEEecCC----CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEE--CCCCcccccE
Confidence 4577788877 5655554 222 11222233345554444443321110 1357999999 6 45 344
Q ss_pred EccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCC------cceEEEEE-CCEEEE
Q 013264 199 RVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERD------ECQGVCLE-GDRFFV 271 (446)
Q Consensus 199 ~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~------~~~~~~~~-~~~lyv 271 (446)
.+..-. .......+...|+++|+.+..++ ...++++|..+.+++.+........ ....+++. ++++++
T Consensus 235 ~l~~~~-~~~~~~~~~spdg~l~~~~~~~~----~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~ 309 (662)
T 3azo_A 235 TLLGGP-EEAIAQAEWAPDGSLIVATDRTG----WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAV 309 (662)
T ss_dssp EEEEET-TBCEEEEEECTTSCEEEEECTTS----SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEE
T ss_pred EeCCCC-CceEcceEECCCCeEEEEECCCC----CeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEE
Confidence 332211 11222333333577887766542 2479999998999998865432211 00233443 677777
Q ss_pred EeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 272 VSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 272 ~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
.+.. + ...++.+|+.++..+.+.
T Consensus 310 ~~~~-~------~~~l~~~d~~~~~~~~l~ 332 (662)
T 3azo_A 310 VHGK-G------AAVLGILDPESGELVDAA 332 (662)
T ss_dssp EEBS-S------SCEEEEEETTTTEEEECC
T ss_pred EEEc-C------ccEEEEEECCCCcEEEec
Confidence 7654 3 236888899888877765
No 101
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=88.74 E-value=15 Score=34.36 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=70.7
Q ss_pred eEEEEECCCCcEE-ecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCC--CcEEEccCCccCc-
Q 013264 132 GLTIFNASNGTWE-RIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNS--SRWRRVKPMSVAR- 207 (446)
Q Consensus 132 ~~~~ydp~~~~W~-~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t--~~W~~~~~~p~~r- 207 (446)
.+.+||..+..-. .+.... ......+.+...++.+++.|+.++ .+.+||. .+ .....+..+....
T Consensus 46 ~v~iw~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~dg-------~v~vw~~--~~~~~~~~~~~~~~~h~~ 114 (416)
T 2pm9_A 46 SLELWSLLAADSEKPIASLQ--VDSKFNDLDWSHNNKIIAGALDNG-------SLELYST--NEANNAINSMARFSNHSS 114 (416)
T ss_dssp CCEEEESSSGGGCSCSCCCC--CSSCEEEEEECSSSSCEEEEESSS-------CEEEECC--SSTTSCCCEEEECCCSSS
T ss_pred eEEEEEccCCCCCcEEEEEe--cCCceEEEEECCCCCeEEEEccCC-------eEEEeec--ccccccccchhhccCCcc
Confidence 4667777765422 122222 122223344434666777776543 5888998 54 1121222222111
Q ss_pred cceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCc------EE-ecCCCCccCCcceEEEEEC--CEEEEEeCCCC
Q 013264 208 SFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADE------WR-MLPEMDEERDECQGVCLEG--DRFFVVSGYGT 277 (446)
Q Consensus 208 ~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~------W~-~~~~~~~~r~~~~~~~~~~--~~lyv~GG~~~ 277 (446)
.-.+++...+ +.+++.|+.+ ..+.+||..+.+ -. .+...........++++.. +.+++.|+.++
T Consensus 115 ~v~~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg 188 (416)
T 2pm9_A 115 SVKTVKFNAKQDNVLASGGNN------GEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSN 188 (416)
T ss_dssp CCCEEEECSSSTTBEEEECSS------SCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSS
T ss_pred ceEEEEEcCCCCCEEEEEcCC------CeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCC
Confidence 1223333332 5666777643 467889987764 11 1111111111113444442 46777777543
Q ss_pred CCCCcccCcEEEEeCCCCceEE
Q 013264 278 ESQGRFKPDAECYDPKTGSWSK 299 (446)
Q Consensus 278 ~~~~~~~~~v~~yd~~~~~W~~ 299 (446)
.+..||+.+.+-..
T Consensus 189 --------~v~iwd~~~~~~~~ 202 (416)
T 2pm9_A 189 --------FASIWDLKAKKEVI 202 (416)
T ss_dssp --------CEEEEETTTTEEEE
T ss_pred --------CEEEEECCCCCcce
Confidence 68999999876543
No 102
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=88.73 E-value=9.3 Score=34.36 Aligned_cols=64 Identities=13% Similarity=0.253 Sum_probs=36.7
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEEC-C--cEEEEEeccCCCCCCCCeEEEEECC
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG-A--STVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~-d--~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
+.+++.|+.++ .+.+||. .+..|..+..+........++.+. + +.+++.|+.+ ..+.+||..
T Consensus 67 g~~l~s~s~D~-------~v~iWd~--~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d------~~v~~wd~~ 131 (297)
T 2pm7_B 67 GTILASCSYDG-------KVMIWKE--ENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSD------GKVSVVEFK 131 (297)
T ss_dssp CSEEEEEETTT-------EEEEEEB--SSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------SEEEEEEBC
T ss_pred CCEEEEEcCCC-------EEEEEEc--CCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECC------CcEEEEEec
Confidence 56777777543 5889999 777766554332222222333332 1 3456666643 467888876
Q ss_pred CC
Q 013264 243 AD 244 (446)
Q Consensus 243 t~ 244 (446)
+.
T Consensus 132 ~~ 133 (297)
T 2pm7_B 132 EN 133 (297)
T ss_dssp SS
T ss_pred CC
Confidence 65
No 103
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=88.52 E-value=17 Score=37.96 Aligned_cols=110 Identities=7% Similarity=-0.005 Sum_probs=63.9
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccC--CccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKP--MSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~--~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
..++.|++++|.. +-+.+||+ .+++++.... +.......++..-.++.||+.. . .-+.+||
T Consensus 480 d~~g~lWi~~~t~-------~Gl~~~d~--~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~-------~Gl~~~~ 542 (758)
T 3ott_A 480 DNEGNVWVLLYNN-------KGIDKINP--RTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-H-------GGVMRIN 542 (758)
T ss_dssp CTTSCEEEEETTC-------SSEEEEET--TTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-T-------TEEEEEC
T ss_pred cCCCCEEEEccCC-------CCcEEEeC--CCCceEEecCCCcCCCcccceEEECCCCCEEEEe-c-------CceEEEe
Confidence 3457788865532 24889999 8888887632 1111111223332347888643 1 2478999
Q ss_pred CCCCcEEecC--CCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 241 VEADEWRMLP--EMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 241 ~~t~~W~~~~--~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+.+++++... .++.. ...++...++.|++... +.+.+||+++.+.....
T Consensus 543 ~~~~~~~~~~~~gl~~~--~i~~i~~~~g~lWi~t~----------~Gl~~~~~~~~~~~~~~ 593 (758)
T 3ott_A 543 PKDESQQSISFGSFSNN--EILSMTCVKNSIWVSTT----------NGLWIIDRKTMDARQQN 593 (758)
T ss_dssp C--CCCCBCCCCC---C--CEEEEEEETTEEEEEES----------SCEEEEETTTCCEEEC-
T ss_pred cCCCceEEecccCCCcc--ceEEEEECCCCEEEECC----------CCeEEEcCCCceeEEec
Confidence 9988877653 23322 12344556789988653 25899999998876543
No 104
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=88.45 E-value=12 Score=33.71 Aligned_cols=149 Identities=9% Similarity=0.068 Sum_probs=72.2
Q ss_pred eEEEEECCC-CcEEecC--CCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEE---EccCCc
Q 013264 132 GLTIFNASN-GTWERIR--PHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWR---RVKPMS 204 (446)
Q Consensus 132 ~~~~ydp~~-~~W~~l~--~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~---~~~~~p 204 (446)
.+.+||..+ .+...+. .............+..-++ .||+.+.. .+.+.+||....+.++. .+..++
T Consensus 152 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~-------~~~i~~~~~~~~~g~~~~~~~~~~~~ 224 (343)
T 1ri6_A 152 RICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL-------NSSVDVWELKDPHGNIECVQTLDMMP 224 (343)
T ss_dssp EEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT-------TTEEEEEESSCTTSCCEEEEEEECSC
T ss_pred EEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCC-------CCEEEEEEecCCCCcEEEEeeccccC
Confidence 567888877 6654322 1110001111223333344 47776543 33678888721123332 222233
Q ss_pred cC---ccce-EEEEECCc-EEEEEeccCCCCCCCCeEEEEECC--CCcEEecCCCCccCCcceEEEEE--CCEEEEEeCC
Q 013264 205 VA---RSFF-ACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVE--ADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGY 275 (446)
Q Consensus 205 ~~---r~~~-~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~ 275 (446)
.. .... .++.-.|+ .||+.+..+ ..+.+||.. +.+++.+...+....- .++++. +..||+.++.
T Consensus 225 ~~~~~~~~~~~i~~s~dg~~l~v~~~~~------~~i~v~d~~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~ 297 (343)
T 1ri6_A 225 ENFSDTRWAADIHITPDGRHLYACDRTA------SLITVFSVSEDGSVLSKEGFQPTETQP-RGFNVDHSGKYLIAAGQK 297 (343)
T ss_dssp TTCCSCCCEEEEEECTTSSEEEEEETTT------TEEEEEEECTTSCCEEEEEEEECSSSC-CCEEECTTSSEEEEECTT
T ss_pred ccccccCCccceEECCCCCEEEEEecCC------CEEEEEEEcCCCCceEEeeeecCCCcc-ceEEECCCCCEEEEecCC
Confidence 21 1112 23333333 677665321 578888887 5567666443322221 233443 3356665542
Q ss_pred CCCCCCcccCcEEEE--eCCCCceEEccc
Q 013264 276 GTESQGRFKPDAECY--DPKTGSWSKFDH 302 (446)
Q Consensus 276 ~~~~~~~~~~~v~~y--d~~~~~W~~~~~ 302 (446)
+ +.+.+| |+++++++.+..
T Consensus 298 ~--------~~v~v~~~d~~~g~~~~~~~ 318 (343)
T 1ri6_A 298 S--------HHISVYEIVGEQGLLHEKGR 318 (343)
T ss_dssp T--------CEEEEEEEETTTTEEEEEEE
T ss_pred C--------CeEEEEEEcCCCceeeEccc
Confidence 2 245555 888888988763
No 105
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=88.43 E-value=15 Score=33.79 Aligned_cols=169 Identities=9% Similarity=0.035 Sum_probs=84.5
Q ss_pred CCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCC-ccCcc-ceEEEEECC
Q 013264 140 NGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPM-SVARS-FFACAVVGA 217 (446)
Q Consensus 140 ~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~-p~~r~-~~~~~~~~d 217 (446)
-.+|+.+.... .....++.....+.+|++|. . ..+++-+- .-.+|+.+... +.+.. ..++....
T Consensus 24 g~~W~~~~~~~---~~~~~~v~~~~~~~~~~~G~-~-------g~i~~s~D--gG~tW~~~~~~~~~~~~~~~~i~~~~- 89 (327)
T 2xbg_A 24 YNPWEAIQLPT---TATILDMSFIDRHHGWLVGV-N-------ATLMETRD--GGQTWEPRTLVLDHSDYRFNSVSFQG- 89 (327)
T ss_dssp SCCEEEEECSC---SSCEEEEEESSSSCEEEEET-T-------TEEEEESS--TTSSCEECCCCCSCCCCEEEEEEEET-
T ss_pred CCCceEeecCC---CCcEEEEEECCCCcEEEEcC-C-------CeEEEeCC--CCCCCeECCCCCCCCCccEEEEEecC-
Confidence 35788776322 12223333323567888653 1 13555544 45789998532 22222 33444444
Q ss_pred cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCC-ccCCcceEEE-EECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 218 STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMD-EERDECQGVC-LEGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 218 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+.+|++|.. ..+++-+=.-.+|+.+.... .+-.. ..++ .-++.+|+.+... .++.-+-.-.
T Consensus 90 ~~~~~~g~~-------g~i~~S~DgG~tW~~~~~~~~~~~~~-~~i~~~~~~~~~~~~~~g---------~v~~S~DgG~ 152 (327)
T 2xbg_A 90 NEGWIVGEP-------PIMLHTTDGGQSWSQIPLDPKLPGSP-RLIKALGNGSAEMITNVG---------AIYRTKDSGK 152 (327)
T ss_dssp TEEEEEEET-------TEEEEESSTTSSCEECCCCTTCSSCE-EEEEEEETTEEEEEETTC---------CEEEESSTTS
T ss_pred CeEEEEECC-------CeEEEECCCCCCceECccccCCCCCe-EEEEEECCCCEEEEeCCc---------cEEEEcCCCC
Confidence 789987532 23333222246899986432 11111 2333 4567888877421 3444433456
Q ss_pred ceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC----CceeEeceEEe
Q 013264 296 SWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ----NGEVVKGKIVS 349 (446)
Q Consensus 296 ~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~----~~~~~~W~~~~ 349 (446)
+|+.+.. + .+...++++...+ +++|++|-.... +..-..|+.+.
T Consensus 153 tW~~~~~----~--~~~~~~~~~~~~~----~~~~~~g~~G~~~~S~d~gG~tW~~~~ 200 (327)
T 2xbg_A 153 NWQALVQ----E--AIGVMRNLNRSPS----GEYVAVSSRGSFYSTWEPGQTAWEPHN 200 (327)
T ss_dssp SEEEEEC----S--CCCCEEEEEECTT----SCEEEEETTSSEEEEECTTCSSCEEEE
T ss_pred CCEEeec----C--CCcceEEEEEcCC----CcEEEEECCCcEEEEeCCCCCceeECC
Confidence 8999873 1 2223444444433 467766532111 11135687764
No 106
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=88.21 E-value=3 Score=39.10 Aligned_cols=113 Identities=15% Similarity=0.116 Sum_probs=59.4
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECC-cEEEEEeccCCCCCCCCeE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGA-STVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d-~~iyv~GG~~~~~~~~~~~ 236 (446)
+++..-++..++.|+.++ .+.+||. .+.+-.. .+....... +++...+ ..+++.++.+ ..+
T Consensus 144 ~v~~spdg~~l~sgs~dg-------~v~iwd~--~~~~~~~--~~~~h~~~v~~v~~s~~~~~~~~s~~~d------g~v 206 (357)
T 4g56_B 144 TLSVFSDGTQAVSGGKDF-------SVKVWDL--SQKAVLK--SYNAHSSEVNCVAACPGKDTIFLSCGED------GRI 206 (357)
T ss_dssp EEEECSSSSEEEEEETTS-------CEEEEET--TTTEEEE--EECCCSSCEEEEEECTTCSSCEEEEETT------SCE
T ss_pred EEEECCCCCEEEEEeCCC-------eEEEEEC--CCCcEEE--EEcCCCCCEEEEEEccCCCceeeeeccC------Cce
Confidence 333434677777777543 4888999 5554332 222111222 2222222 3466666653 467
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+||..+.+-...-..........+++.. ++.+++.|+.++ .+..||+.+.+
T Consensus 207 ~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~--------~i~~wd~~~~~ 260 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG--------NVSLVNIKNPD 260 (357)
T ss_dssp EECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS--------CEEEEESSCGG
T ss_pred EEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc--------ceeEEECCCCc
Confidence 88998776533322222222221233333 356777776532 58899988764
No 107
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=88.19 E-value=18 Score=37.04 Aligned_cols=156 Identities=13% Similarity=0.152 Sum_probs=82.2
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC-cEEEccCCccCcc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS-RWRRVKPMSVARS 208 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~-~W~~~~~~p~~r~ 208 (446)
...+.++|..+++-..+..... ...........-+++.++++..+... ....++++|+ .+. ..+.+........
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~--~~~~v~~~d~--~~g~~~~~~~~~~~~~~ 308 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTGEP-KEKFLTNLSWSPDENILYVAEVNRAQ--NECKVNAYDA--ETGRFVRTLFVETDKHY 308 (706)
T ss_dssp EEEEEEEETTTTEEEECCCCSC-TTCEEEEEEECTTSSEEEEEEECTTS--CEEEEEEEET--TTCCEEEEEEEEECSSC
T ss_pred eeEEEEEECCCCceEeeccCCC-CceeEeeEEEECCCCEEEEEEeCCCC--CeeEEEEEEC--CCCceeeEEEEccCCCe
Confidence 3568889998887666543221 11122223333455544444333221 2457999999 777 6655532111110
Q ss_pred ---ceEEEEEC--CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceE-EEEE--CCEEEEEeCCCCCCC
Q 013264 209 ---FFACAVVG--ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQG-VCLE--GDRFFVVSGYGTESQ 280 (446)
Q Consensus 209 ---~~~~~~~~--d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~-~~~~--~~~lyv~GG~~~~~~ 280 (446)
...++... |+++++.+..++ ...++.+|........+..-.... .. .++. ++.||+.+..++.
T Consensus 309 ~~~~~~~~~sp~~dg~~l~~~~~~g----~~~l~~~~~~~~~~~~l~~~~~~v---~~~~~~spdg~~l~~~~~~~~~-- 379 (706)
T 2z3z_A 309 VEPLHPLTFLPGSNNQFIWQSRRDG----WNHLYLYDTTGRLIRQVTKGEWEV---TNFAGFDPKGTRLYFESTEASP-- 379 (706)
T ss_dssp CCCCSCCEECTTCSSEEEEEECTTS----SCEEEEEETTSCEEEECCCSSSCE---EEEEEECTTSSEEEEEESSSCT--
T ss_pred ECccCCceeecCCCCEEEEEEccCC----ccEEEEEECCCCEEEecCCCCeEE---EeeeEEcCCCCEEEEEecCCCC--
Confidence 01223333 477666654432 367888897777777765322111 12 2232 3467776654321
Q ss_pred CcccCcEEEEeCCCCceEEcc
Q 013264 281 GRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 281 ~~~~~~v~~yd~~~~~W~~~~ 301 (446)
....++.+|..++....+.
T Consensus 380 --~~~~l~~~d~~~~~~~~l~ 398 (706)
T 2z3z_A 380 --LERHFYCIDIKGGKTKDLT 398 (706)
T ss_dssp --TCBEEEEEETTCCCCEESC
T ss_pred --ceEEEEEEEcCCCCceecc
Confidence 1237888999888766664
No 108
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=88.03 E-value=7.8 Score=39.15 Aligned_cols=119 Identities=12% Similarity=0.160 Sum_probs=69.6
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeC-cCCCCcEEEccCCccC--------ccceEEEEECCcEEEEEeccCCCCCCCC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDM-VNNSSRWRRVKPMSVA--------RSFFACAVVGASTVCVAGGHDGQKNALK 234 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~-~~~t~~W~~~~~~p~~--------r~~~~~~~~~d~~iyv~GG~~~~~~~~~ 234 (446)
.++.||+.... ...++.+|. .+.+..|+.-...... ....+.++.+ ++||+... -.
T Consensus 61 ~~g~vyv~~~~-------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~-------dg 125 (571)
T 2ad6_A 61 IGDMMYVHSAF-------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGA-GQIVKKQA-------NG 125 (571)
T ss_dssp ETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEET-TEEEEECT-------TS
T ss_pred ECCEEEEEeCC-------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEEC-CEEEEEeC-------CC
Confidence 68999998652 235888987 5566778875433211 0112334555 89988743 15
Q ss_pred eEEEEECCCC--cEEecCCCC-ccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEc
Q 013264 235 SAEVYDVEAD--EWRMLPEMD-EERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 235 ~~~~yd~~t~--~W~~~~~~~-~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 300 (446)
.+..+|..|. .|+.-..-+ .......+-++.++++|+-.+.... .....+++||.++++ |+.-
T Consensus 126 ~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 126 HLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAEL---GVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGG---TCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCcc---CCCCEEEEEECCCCcEEEEEc
Confidence 7899999877 588532211 1111112335668898875432110 013479999998874 8653
No 109
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=87.91 E-value=5.9 Score=37.00 Aligned_cols=174 Identities=9% Similarity=0.059 Sum_probs=82.4
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC-CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS-RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~-~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+++-...-... .....+++...+ +.+++.|+.++ .+.+||. .+.+-...-.........
T Consensus 162 ~v~iwd~~~~~~~~~~~~h---~~~v~~v~~s~~~~~~~~s~~~dg-------~v~~wd~--~~~~~~~~~~~~~~~~~v 229 (357)
T 4g56_B 162 SVKVWDLSQKAVLKSYNAH---SSEVNCVAACPGKDTIFLSCGEDG-------RILLWDT--RKPKPATRIDFCASDTIP 229 (357)
T ss_dssp CEEEEETTTTEEEEEECCC---SSCEEEEEECTTCSSCEEEEETTS-------CEEECCT--TSSSCBCBCCCTTCCSCE
T ss_pred eEEEEECCCCcEEEEEcCC---CCCEEEEEEccCCCceeeeeccCC-------ceEEEEC--CCCceeeeeeeccccccc
Confidence 4567777766543321111 111122333223 34667776543 4788998 555432222222222222
Q ss_pred EEEEEC--CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCc
Q 013264 211 ACAVVG--ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 211 ~~~~~~--d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~ 286 (446)
.++.+. ++++++.|+.+ ..+.+||..+.+=. ..+........++++. ++ ++.+.|+.++ .
T Consensus 230 ~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~--~~~~~~~~~v~~l~~sp~~~~~lasgs~D~--------~ 293 (357)
T 4g56_B 230 TSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSA--QTSAVHSQNITGLAYSYHSSPFLASISEDC--------T 293 (357)
T ss_dssp EEEEECTTSTTEEEEEESS------SCEEEEESSCGGGC--EEECCCSSCEEEEEECSSSSCCEEEEETTS--------C
T ss_pred cchhhhhcccceEEEeecc------cceeEEECCCCcEe--EEEeccceeEEEEEEcCCCCCEEEEEeCCC--------E
Confidence 333332 24677777643 46788998765311 1111111111233332 33 5556666432 6
Q ss_pred EEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCCCceeEece
Q 013264 287 AECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQNGEVVKGK 346 (446)
Q Consensus 287 v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~~~~~~~W~ 346 (446)
+..||.++++-...- ........+.+.- .++.+++.||.++ ....|.
T Consensus 294 i~iwd~~~~~~~~~~--------~H~~~V~~vafsP--~d~~~l~s~s~Dg---~v~iW~ 340 (357)
T 4g56_B 294 VAVLDADFSEVFRDL--------SHRDFVTGVAWSP--LDHSKFTTVGWDH---KVLHHH 340 (357)
T ss_dssp EEEECTTSCEEEEEC--------CCSSCEEEEEECS--SSTTEEEEEETTS---CEEEEE
T ss_pred EEEEECCCCcEeEEC--------CCCCCEEEEEEeC--CCCCEEEEEcCCC---eEEEEE
Confidence 899999887543322 1122233333320 0136788888765 344453
No 110
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=87.86 E-value=16 Score=33.26 Aligned_cols=145 Identities=10% Similarity=0.078 Sum_probs=73.8
Q ss_pred eEEEEECCCCcEEecCCCCC-CC-----CccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc
Q 013264 132 GLTIFNASNGTWERIRPHVG-RI-----PMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS 204 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~-~~-----p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p 204 (446)
.+..||+.+.+-...-.... .. +...+..+..- ++.+|+.+... ...++++|+ .+.+-...-+.
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~------~~~i~~~d~--~~~~~~~~~~~- 182 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK------ESVIWVVDG--GNIKLKTAIQN- 182 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS------SCEEEEEET--TTTEEEEEECC-
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC------CceEEEEcC--CCCceEEEecC-
Confidence 57889988876533222211 00 11123333333 45677776321 346999999 55543322111
Q ss_pred cCccceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCC--ccCCcceEEEEE--CCEEEEEeCCCCCC
Q 013264 205 VARSFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMD--EERDECQGVCLE--GDRFFVVSGYGTES 279 (446)
Q Consensus 205 ~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~--~~r~~~~~~~~~--~~~lyv~GG~~~~~ 279 (446)
.......++...| +.+|+... ...+.+||..+.+=...-... .+.....++++. ++.+|+....
T Consensus 183 ~~~~~~~~~~s~dg~~l~~~~~-------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~---- 251 (353)
T 3vgz_A 183 TGKMSTGLALDSEGKRLYTTNA-------DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK---- 251 (353)
T ss_dssp CCTTCCCCEEETTTTEEEEECT-------TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS----
T ss_pred CCCccceEEECCCCCEEEEEcC-------CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC----
Confidence 1111223333333 56777643 157889999887543222221 112221234444 4568877542
Q ss_pred CCcccCcEEEEeCCCCceEEc
Q 013264 280 QGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 280 ~~~~~~~v~~yd~~~~~W~~~ 300 (446)
.+.+.+||+.+++-...
T Consensus 252 ----~~~v~~~d~~~~~~~~~ 268 (353)
T 3vgz_A 252 ----AAEVLVVDTRNGNILAK 268 (353)
T ss_dssp ----SSEEEEEETTTCCEEEE
T ss_pred ----CCEEEEEECCCCcEEEE
Confidence 24799999988875443
No 111
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=87.38 E-value=8.3 Score=39.97 Aligned_cols=118 Identities=16% Similarity=0.186 Sum_probs=68.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC--------ccceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA--------RSFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~--------r~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
.++.||+... ...++.+|..+.+..|+.-...+.. ....+.++.+ ++||+... -..
T Consensus 69 ~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~v~v~~~-------dg~ 132 (689)
T 1yiq_A 69 VDGVMYTTGP--------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWK-GKVYVGVL-------DGR 132 (689)
T ss_dssp ETTEEEEECG--------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEET-TEEEEECT-------TSE
T ss_pred ECCEEEEEcC--------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEEC-CEEEEEcc-------CCE
Confidence 6899999754 2358899983344458865433211 0112234555 78888642 157
Q ss_pred EEEEECCCCc--EEecCC-CCcc-CCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEc
Q 013264 236 AEVYDVEADE--WRMLPE-MDEE-RDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 236 ~~~yd~~t~~--W~~~~~-~~~~-r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 300 (446)
+..+|..|.+ |+.-.. -+.. .....+.++.++.+|+-.+.... .....+++||.+|++ |+.-
T Consensus 133 l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 133 LEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF---GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc---CCCCEEEEEECCCCcEEEEec
Confidence 8999998774 886542 1111 11112345678898874322110 124579999999885 8754
No 112
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.27 E-value=9 Score=39.55 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=68.8
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCc--------cceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR--------SFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r--------~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
.++.||+... ...++.+|..+.+..|+.-...+... ...+.++.+ ++||+... -..
T Consensus 65 ~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~v~v~~~-------dg~ 128 (668)
T 1kv9_A 65 HDGVIYTSMS--------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWG-DKVYVGTL-------DGR 128 (668)
T ss_dssp ETTEEEEEEG--------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEB-TEEEEECT-------TSE
T ss_pred ECCEEEEECC--------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEEC-CEEEEEcC-------CCE
Confidence 6899999764 23688899843444588754332110 112234555 78988642 157
Q ss_pred EEEEECCCCc--EEecCCCCccCC-cceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEc
Q 013264 236 AEVYDVEADE--WRMLPEMDEERD-ECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 236 ~~~yd~~t~~--W~~~~~~~~~r~-~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~ 300 (446)
+..+|..|.+ |+.-..-+.... ...+.++.++.+|+-.+.... .....+++||+++++ |+.-
T Consensus 129 l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~---~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 129 LIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEY---GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCc---CCCCEEEEEECCCCcEEEEec
Confidence 8999988774 886432111111 112345678888874322110 123579999999875 8753
No 113
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=87.19 E-value=4.3 Score=37.86 Aligned_cols=113 Identities=14% Similarity=0.105 Sum_probs=58.4
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CC-cEEEEEeccCCCCCCCCeE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GA-STVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d-~~iyv~GG~~~~~~~~~~~ 236 (446)
+++..-+++.++.|+.++ .+.+||. .+.+-. ..+........++.+ .+ ..+++.|+.+ ..+
T Consensus 132 ~v~~spdg~~l~sgs~d~-------~i~iwd~--~~~~~~--~~~~~h~~~V~~~~~~~~~~~~l~s~s~D------~~v 194 (344)
T 4gqb_B 132 TVSVLSSGTQAVSGSKDI-------CIKVWDL--AQQVVL--SSYRAHAAQVTCVAASPHKDSVFLSCSED------NRI 194 (344)
T ss_dssp EEEECTTSSEEEEEETTS-------CEEEEET--TTTEEE--EEECCCSSCEEEEEECSSCTTEEEEEETT------SCE
T ss_pred EEEECCCCCEEEEEeCCC-------eEEEEEC--CCCcEE--EEEcCcCCceEEEEecCCCCCceeeeccc------ccc
Confidence 333444677777777543 5889999 555432 222221122222222 22 3567777654 467
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+||..+.+-...-..........+++.. ++++++.|+.++ .|..||..+++
T Consensus 195 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg--------~v~~wd~~~~~ 248 (344)
T 4gqb_B 195 LLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG--------TVSLVDTKSTS 248 (344)
T ss_dssp EEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTS--------EEEEEESCC--
T ss_pred ccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCC--------cEEEEECCCCc
Confidence 89999877543321111111111233333 456777777542 68899998764
No 114
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=87.11 E-value=19 Score=33.40 Aligned_cols=74 Identities=7% Similarity=0.073 Sum_probs=38.8
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCC---C-ccCCcceEEEEE-CCEEEEEeCCCCCCCCcccC
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEM---D-EERDECQGVCLE-GDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---~-~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~ 285 (446)
+++...++ +++.|+.+ ..+.+||..+.+-...-.. . .......++++. ++++++.|+.++. ..
T Consensus 191 ~~~~~~~~-~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-----~g 258 (397)
T 1sq9_A 191 SVDISERG-LIATGFNN------GTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-----FG 258 (397)
T ss_dssp EEEECTTS-EEEEECTT------SEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT-----EE
T ss_pred EEEECCCc-eEEEEeCC------CcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC-----Cc
Confidence 44444446 66666543 5789999987754332111 1 001111233333 4566666654310 13
Q ss_pred cEEEEeCCCCc
Q 013264 286 DAECYDPKTGS 296 (446)
Q Consensus 286 ~v~~yd~~~~~ 296 (446)
.+..||..+.+
T Consensus 259 ~i~i~d~~~~~ 269 (397)
T 1sq9_A 259 CITLYETEFGE 269 (397)
T ss_dssp EEEEEETTTCC
T ss_pred eEEEEECCCCc
Confidence 68999998764
No 115
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=87.11 E-value=10 Score=34.47 Aligned_cols=129 Identities=8% Similarity=0.043 Sum_probs=71.9
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
.+.+...++.||+.+.. ...+++||+ .+.+...+.... ...-.+++.-.++++|+....... ....+.
T Consensus 48 ~~~~~~~~g~l~~~~~~-------~~~i~~~d~--~~~~~~~~~~~~-~~~~~~i~~~~dg~l~v~~~~~~~--~~~~i~ 115 (333)
T 2dg1_A 48 EGLNFDRQGQLFLLDVF-------EGNIFKINP--ETKEIKRPFVSH-KANPAAIKIHKDGRLFVCYLGDFK--STGGIF 115 (333)
T ss_dssp EEEEECTTSCEEEEETT-------TCEEEEECT--TTCCEEEEEECS-SSSEEEEEECTTSCEEEEECTTSS--SCCEEE
T ss_pred cCcEECCCCCEEEEECC-------CCEEEEEeC--CCCcEEEEeeCC-CCCcceEEECCCCcEEEEeCCCCC--CCceEE
Confidence 34444457789888753 236999999 778776653211 122234444445788887643211 125789
Q ss_pred EEECCCCcEEe-cCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 238 VYDVEADEWRM-LPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 238 ~yd~~t~~W~~-~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+||+.+++-+. +........ ...+++. ++++|+....... ......++.||+++++...+.
T Consensus 116 ~~d~~~~~~~~~~~~~~~~~~-~~~i~~d~~g~l~v~~~~~~~--~~~~~~l~~~~~~~~~~~~~~ 178 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLSTAYC-IDDMVFDSKGGFYFTDFRGYS--TNPLGGVYYVSPDFRTVTPII 178 (333)
T ss_dssp EECTTSCSCEEEECSSSSCCC-EEEEEECTTSCEEEEECCCBT--TBCCEEEEEECTTSCCEEEEE
T ss_pred EEeCCCCEEEEEEccCccCCc-ccceEECCCCCEEEEeccccc--cCCCceEEEEeCCCCEEEEee
Confidence 99998887653 222111111 1233333 5688886542110 011346899999887766553
No 116
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=87.04 E-value=15 Score=33.17 Aligned_cols=111 Identities=7% Similarity=0.022 Sum_probs=61.9
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
.++.+|+.++. .+.+.+||+ .+.+....-..+. ....++.-.|+ .+|+.+..+ ..+++||+.
T Consensus 8 ~~~~~~v~~~~-------~~~v~~~d~--~~~~~~~~~~~~~--~~~~~~~s~dg~~l~~~~~~~------~~i~~~d~~ 70 (331)
T 3u4y_A 8 TSNFGIVVEQH-------LRRISFFST--DTLEILNQITLGY--DFVDTAITSDCSNVVVTSDFC------QTLVQIETQ 70 (331)
T ss_dssp CCCEEEEEEGG-------GTEEEEEET--TTCCEEEEEECCC--CEEEEEECSSSCEEEEEESTT------CEEEEEECS
T ss_pred CCCEEEEEecC-------CCeEEEEeC--cccceeeeEEccC--CcceEEEcCCCCEEEEEeCCC------CeEEEEECC
Confidence 35778887653 347999999 7777755433322 22233333344 577776532 488999998
Q ss_pred CCcE--EecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 243 ADEW--RMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 243 t~~W--~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
+++- ..+..-..+. .++++. +..|| .+...+ ....+.+||+.+++-...
T Consensus 71 ~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~-~~~~~~-----~~~~i~v~d~~~~~~~~~ 123 (331)
T 3u4y_A 71 LEPPKVVAIQEGQSSM---ADVDITPDDQFAV-TVTGLN-----HPFNMQSYSFLKNKFIST 123 (331)
T ss_dssp SSSCEEEEEEECSSCC---CCEEECTTSSEEE-ECCCSS-----SSCEEEEEETTTTEEEEE
T ss_pred CCceeEEecccCCCCc---cceEECCCCCEEE-EecCCC-----CcccEEEEECCCCCeEEE
Confidence 8874 2222222222 213333 33566 332211 112799999998876443
No 117
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=86.97 E-value=17 Score=32.61 Aligned_cols=164 Identities=8% Similarity=-0.028 Sum_probs=83.4
Q ss_pred eeEEEEECCCC--cEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC-cEEEc-c-CCcc
Q 013264 131 YGLTIFNASNG--TWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS-RWRRV-K-PMSV 205 (446)
Q Consensus 131 ~~~~~ydp~~~--~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~-~W~~~-~-~~p~ 205 (446)
..+..||+ +. .|+.-.... ...+++....++.+++..... ...++.+|+ ..+ .|+.- . ..+.
T Consensus 56 ~~V~~~d~-~G~~~W~~~~~~~----~~~~~~~~~~dG~~lv~~~~~------~~~v~~vd~--~Gk~l~~~~~~~~~~~ 122 (276)
T 3no2_A 56 KGAKMITR-DGRELWNIAAPAG----CEMQTARILPDGNALVAWCGH------PSTILEVNM--KGEVLSKTEFETGIER 122 (276)
T ss_dssp SEEEEECT-TSCEEEEEECCTT----CEEEEEEECTTSCEEEEEEST------TEEEEEECT--TSCEEEEEEECCSCSS
T ss_pred CCEEEECC-CCCEEEEEcCCCC----ccccccEECCCCCEEEEecCC------CCEEEEEeC--CCCEEEEEeccCCCCc
Confidence 35788888 44 365433211 122344445677777765421 235788888 433 34432 1 1111
Q ss_pred C-ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC-cEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 206 A-RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD-EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 206 ~-r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
+ .....+....++.+++.... ...+.+||+.-+ .|+.-... ... ......++.+++.+..+
T Consensus 123 ~~~~~~~v~~~~~G~~lv~~~~------~~~v~~~d~~G~~~w~~~~~~---~~~-~~~~~~~g~~~v~~~~~------- 185 (276)
T 3no2_A 123 PHAQFRQINKNKKGNYLVPLFA------TSEVREIAPNGQLLNSVKLSG---TPF-SSAFLDNGDCLVACGDA------- 185 (276)
T ss_dssp GGGSCSCCEECTTSCEEEEETT------TTEEEEECTTSCEEEEEECSS---CCC-EEEECTTSCEEEECBTT-------
T ss_pred ccccccCceECCCCCEEEEecC------CCEEEEECCCCCEEEEEECCC---Ccc-ceeEcCCCCEEEEeCCC-------
Confidence 1 11122233344666665432 257889998732 47654321 111 23344467888776532
Q ss_pred cCcEEEEeCCCCc--eEEcccCCCCCCCCCCC--ceEEEEecCCCcccEEEEEc
Q 013264 284 KPDAECYDPKTGS--WSKFDHVWPFPSLSPRG--STATITSYRLQQHQWLWFLG 333 (446)
Q Consensus 284 ~~~v~~yd~~~~~--W~~~~~~~p~~~~~~r~--~~~~~~~~~~~~~~~lyv~G 333 (446)
..+.+||+++++ |+.-.. ..+..+. -.+++...+ +.+||..
T Consensus 186 -~~v~~~d~~tG~~~w~~~~~----~~~~~~l~~~~~~~~~~~----G~i~v~~ 230 (276)
T 3no2_A 186 -HCFVQLNLESNRIVRRVNAN----DIEGVQLFFVAQLFPLQN----GGLYICN 230 (276)
T ss_dssp -SEEEEECTTTCCEEEEEEGG----GSBSCCCSEEEEEEECTT----SCEEEEE
T ss_pred -CeEEEEeCcCCcEEEEecCC----CCCCccccccccceEcCC----CCEEEEe
Confidence 369999999764 765432 1111121 233444444 5888887
No 118
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=86.81 E-value=19 Score=33.03 Aligned_cols=137 Identities=14% Similarity=0.194 Sum_probs=69.2
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc-e
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF-F 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~-~ 210 (446)
.+.+||..+.+-... +.. ......+.....++.+++.|+.++ .+.+||. .+..-... +...... .
T Consensus 165 ~i~~wd~~~~~~~~~--~~~-h~~~v~~~~~~~~~~~l~sg~~d~-------~v~~wd~--~~~~~~~~--~~~h~~~v~ 230 (340)
T 1got_B 165 TCALWDIETGQQTTT--FTG-HTGDVMSLSLAPDTRLFVSGACDA-------SAKLWDV--REGMCRQT--FTGHESDIN 230 (340)
T ss_dssp CEEEEETTTTEEEEE--ECC-CSSCEEEEEECTTSSEEEEEETTS-------CEEEEET--TTCSEEEE--ECCCSSCEE
T ss_pred cEEEEECCCCcEEEE--EcC-CCCceEEEEECCCCCEEEEEeCCC-------cEEEEEC--CCCeeEEE--EcCCcCCEE
Confidence 356677766553321 111 111123333334677778887543 5888998 55543221 1111111 2
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++...+++.++.|+.+ ..+.+||..+++-...-..........++++. ++++.+.|+.+ ..+..
T Consensus 231 ~v~~~p~~~~l~s~s~d------~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d--------~~i~v 296 (340)
T 1got_B 231 AICFFPNGNAFATGSDD------ATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDD--------FNCNV 296 (340)
T ss_dssp EEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT--------SEEEE
T ss_pred EEEEcCCCCEEEEEcCC------CcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCC--------CeEEE
Confidence 23333346677777754 46789998876533221111111111233332 55666777643 26899
Q ss_pred EeCCCCc
Q 013264 290 YDPKTGS 296 (446)
Q Consensus 290 yd~~~~~ 296 (446)
||..+..
T Consensus 297 wd~~~~~ 303 (340)
T 1got_B 297 WDALKAD 303 (340)
T ss_dssp EETTTCC
T ss_pred EEcccCc
Confidence 9987654
No 119
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=86.78 E-value=7.1 Score=35.88 Aligned_cols=103 Identities=10% Similarity=0.035 Sum_probs=56.6
Q ss_pred eEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEE
Q 013264 184 DVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVC 263 (446)
Q Consensus 184 ~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~ 263 (446)
.++.+|. .+.++..+........-..++.-.|++||+.+.... ...+.+||..+++++.+............++
T Consensus 19 ~v~~~d~--~tg~~~~~~~~~~~~~p~~~a~spdg~l~~~~~~~~----~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a 92 (347)
T 3hfq_A 19 YQGTLDT--TAKTLTNDGLLAATQNPTYLALSAKDCLYSVDKEDD----EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVA 92 (347)
T ss_dssp EEEEEET--TTTEEEEEEEEEECSCCCCEEECTTCEEEEEEEETT----EEEEEEEEEETTEEEEEEEEEEESCCCSEEE
T ss_pred EEEEEcC--CCCeEEEeeeeeccCCcceEEEccCCeEEEEEecCC----CceEEEEEecCCcEEEeeeeecCCCCCEEEE
Confidence 4677777 778777653322222222344444578888764321 2678999998888876654322211112344
Q ss_pred EE-CC-EEEEEeCCCCCCCCcccCcEEEEeCC-CCceEEc
Q 013264 264 LE-GD-RFFVVSGYGTESQGRFKPDAECYDPK-TGSWSKF 300 (446)
Q Consensus 264 ~~-~~-~lyv~GG~~~~~~~~~~~~v~~yd~~-~~~W~~~ 300 (446)
+. ++ .||+.+.. ...+..||+. +++...+
T Consensus 93 ~spdg~~l~~~~~~--------~~~v~v~~~~~~g~~~~~ 124 (347)
T 3hfq_A 93 VDEARQLVYSANYH--------KGTAEVMKIAADGALTLT 124 (347)
T ss_dssp EETTTTEEEEEETT--------TTEEEEEEECTTSCEEEE
T ss_pred ECCCCCEEEEEeCC--------CCEEEEEEeCCCCCeeec
Confidence 33 33 57776532 1367888874 3344433
No 120
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=86.62 E-value=5.5 Score=36.38 Aligned_cols=102 Identities=16% Similarity=0.208 Sum_probs=51.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEee--CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA--SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||..+++...+..+.. ....-.+++... ++.+++.|+.++ .+.+||. .+..|..+..+......
T Consensus 36 ~v~lwd~~~~~~~~~~~l~g-H~~~V~~v~~~~~~~~~~l~s~s~D~-------~v~iWd~--~~~~~~~~~~~~~h~~~ 105 (316)
T 3bg1_A 36 SVKIFDVRNGGQILIADLRG-HEGPVWQVAWAHPMYGNILASCSYDR-------KVIIWRE--ENGTWEKSHEHAGHDSS 105 (316)
T ss_dssp EEEEEEEETTEEEEEEEEEC-CSSCEEEEEECCGGGSSCEEEEETTS-------CEEEECC--SSSCCCEEEEECCCSSC
T ss_pred eEEEEEecCCCcEEEEEEcC-CCccEEEEEeCCCCCCCEEEEEECCC-------EEEEEEC--CCCcceEEEEccCCCCc
Confidence 46677776654433322221 111112222211 256777777543 5889999 77766554333222222
Q ss_pred e-EEEEECC--cEEEEEeccCCCCCCCCeEEEEECCCC-cEEec
Q 013264 210 F-ACAVVGA--STVCVAGGHDGQKNALKSAEVYDVEAD-EWRML 249 (446)
Q Consensus 210 ~-~~~~~~d--~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~ 249 (446)
. +++...+ +.+++.|+.+ ..+.+||..+. .|...
T Consensus 106 V~~v~~~p~~~g~~lasgs~D------~~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 106 VNSVCWAPHDYGLILACGSSD------GAISLLTYTGEGQWEVK 143 (316)
T ss_dssp CCEEEECCTTTCSCEEEECSS------SCEEEEEECSSSCEEEC
T ss_pred eEEEEECCCCCCcEEEEEcCC------CCEEEEecCCCCCccee
Confidence 2 2333222 4566666654 45678887765 57543
No 121
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=86.47 E-value=18 Score=36.60 Aligned_cols=147 Identities=12% Similarity=0.019 Sum_probs=83.0
Q ss_pred eEEEEECC-CC---cEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 132 GLTIFNAS-NG---TWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 132 ~~~~ydp~-~~---~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
.++++|.. ++ +...+..-. ..........-++++|+.+..++ ...++++|+ .+.+++.+.......
T Consensus 218 ~i~~~d~~~~g~~~~~~~l~~~~---~~~~~~~~~spdg~l~~~~~~~~-----~~~l~~~~~--~~~~~~~l~~~~~~~ 287 (662)
T 3azo_A 218 ELKTARVTEDGRFADTRTLLGGP---EEAIAQAEWAPDGSLIVATDRTG-----WWNLHRVDP--ATGAATQLCRREEEF 287 (662)
T ss_dssp EEEEEEECTTSCEEEEEEEEEET---TBCEEEEEECTTSCEEEEECTTS-----SCEEEEECT--TTCCEEESSCCSSBS
T ss_pred EEEEEEECCCCcccccEEeCCCC---CceEcceEECCCCeEEEEECCCC-----CeEEEEEEC--CCCceeecccccccc
Confidence 46677776 45 333332211 11112233334677777765432 347999999 788898875532211
Q ss_pred c-------ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEE-EEECCEEEEEeCCCCCC
Q 013264 208 S-------FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGV-CLEGDRFFVVSGYGTES 279 (446)
Q Consensus 208 ~-------~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~-~~~~~~lyv~GG~~~~~ 279 (446)
. ....+...++++++.+.. + ...++.+|..+++.+.+..-. .....+ ...++.+++..+...
T Consensus 288 ~~p~w~~~~~~~~~~~~~~~~~~~~~-~----~~~l~~~d~~~~~~~~l~~~~---~~~~~~~s~~~~~~~~~~~~~~-- 357 (662)
T 3azo_A 288 AGPLWTPGMRWFAPLANGLIAVVHGK-G----AAVLGILDPESGELVDAAGPW---TEWAATLTVSGTRAVGVAASPR-- 357 (662)
T ss_dssp SCCCCSTTCCSEEECTTSCEEEEEBS-S----SCEEEEEETTTTEEEECCSSC---CEEEEEEEEETTEEEEEEEETT--
T ss_pred cCccccccCceEeEeCCCEEEEEEEc-C----ccEEEEEECCCCcEEEecCCC---CeEEEEEecCCCEEEEEEcCCC--
Confidence 0 112333334777777654 2 257888899888877764321 111233 455666666544321
Q ss_pred CCcccCcEEEEeCCCCceEEcc
Q 013264 280 QGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 280 ~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
....++.+|+.+++.+.+.
T Consensus 358 ---~~~~i~~~d~~~g~~~~l~ 376 (662)
T 3azo_A 358 ---TAYEVVELDTVTGRARTIG 376 (662)
T ss_dssp ---EEEEEEEEETTTCCEEEEE
T ss_pred ---CCCEEEEEECCCCceEEee
Confidence 2347888999888887764
No 122
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=86.40 E-value=16 Score=31.85 Aligned_cols=147 Identities=10% Similarity=0.006 Sum_probs=77.5
Q ss_pred eEEEEECCC-CcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASN-GTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~-~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+ .+...+..... .....+....-+++.+++++.... ....++.+|. .+..-..+..... ..
T Consensus 63 ~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~~--~~~~~~~~~~~~~---~~ 132 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEKVDTGFA--TICNNDHGISPDGALYAISDKVEF---GKSAIYLLPS--TGGTPRLMTKNLP---SY 132 (297)
T ss_dssp EEEEEESSSCCSCEECCCTTC--CCBCSCCEECTTSSEEEEEECTTT---SSCEEEEEET--TCCCCEECCSSSS---EE
T ss_pred eEEEEeCCCCCCceEeccccc--cccccceEECCCCCEEEEEEeCCC---CcceEEEEEC--CCCceEEeecCCC---cc
Confidence 577899888 77666554331 111122333345665555553221 2457899998 6666555543321 22
Q ss_pred EEEEECCc-EEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~v 287 (446)
.++...|+ .|++.++.++. ..++.+|..+.....+....... ..+... ++ .|++.+..++ ...+
T Consensus 133 ~~~~spdg~~l~~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~~~~~~~~------~~~i 199 (297)
T 2ojh_A 133 WHGWSPDGKSFTYCGIRDQV----FDIYSMDIDSGVETRLTHGEGRN---DGPDYSPDGRWIYFNSSRTG------QMQI 199 (297)
T ss_dssp EEEECTTSSEEEEEEEETTE----EEEEEEETTTCCEEECCCSSSCE---EEEEECTTSSEEEEEECTTS------SCEE
T ss_pred ceEECCCCCEEEEEECCCCc----eEEEEEECCCCcceEcccCCCcc---ccceECCCCCEEEEEecCCC------CccE
Confidence 22333234 45555544321 46777778877777665433211 223332 44 4555544332 2367
Q ss_pred EEEeCCCCceEEcc
Q 013264 288 ECYDPKTGSWSKFD 301 (446)
Q Consensus 288 ~~yd~~~~~W~~~~ 301 (446)
+.+++.+.....+.
T Consensus 200 ~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 200 WRVRVDGSSVERIT 213 (297)
T ss_dssp EEEETTSSCEEECC
T ss_pred EEECCCCCCcEEEe
Confidence 88887777766665
No 123
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=86.06 E-value=21 Score=32.99 Aligned_cols=136 Identities=7% Similarity=0.027 Sum_probs=72.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-c
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-F 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~ 209 (446)
.+.+||..+.+......... ......++...- ++.+++.|+.+ ..+.+||. .+.....+........ -
T Consensus 97 ~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~l~s~~~d-------~~i~iwd~--~~~~~~~~~~~~~~~~~v 166 (383)
T 3ei3_B 97 DIILWDYDVQNKTSFIQGMG-PGDAITGMKFNQFNTNQLFVSSIR-------GATTLRDF--SGSVIQVFAKTDSWDYWY 166 (383)
T ss_dssp CEEEEETTSTTCEEEECCCS-TTCBEEEEEEETTEEEEEEEEETT-------TEEEEEET--TSCEEEEEECCCCSSCCE
T ss_pred eEEEEeCCCcccceeeecCC-cCCceeEEEeCCCCCCEEEEEeCC-------CEEEEEEC--CCCceEEEeccCCCCCCe
Confidence 47788988877665544321 111222333322 44677777654 36889999 6666555533221111 2
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEEC-CE-EEEEeCCCCCCCCcccCcE
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEG-DR-FFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~-~~-lyv~GG~~~~~~~~~~~~v 287 (446)
.+++...+++.++.|+.+ ..+.+||.....-..+.... ....++++.. +. +++.|+.+ ..+
T Consensus 167 ~~~~~~~~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~h~---~~v~~~~~~~~~~~~l~s~~~d--------~~i 229 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDST------GRLLLLGLDGHEIFKEKLHK---AKVTHAEFNPRCDWLMATSSVD--------ATV 229 (383)
T ss_dssp EEEEEETTTTEEEEEETT------SEEEEEETTSCEEEEEECSS---SCEEEEEECSSCTTEEEEEETT--------SEE
T ss_pred EEEEECCCCCEEEEECCC------CCEEEEECCCCEEEEeccCC---CcEEEEEECCCCCCEEEEEeCC--------CEE
Confidence 233333445666776643 57899998544433332211 1113334432 33 66777653 268
Q ss_pred EEEeCCC
Q 013264 288 ECYDPKT 294 (446)
Q Consensus 288 ~~yd~~~ 294 (446)
..||+.+
T Consensus 230 ~iwd~~~ 236 (383)
T 3ei3_B 230 KLWDLRN 236 (383)
T ss_dssp EEEEGGG
T ss_pred EEEeCCC
Confidence 8999886
No 124
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=85.82 E-value=12 Score=35.02 Aligned_cols=134 Identities=13% Similarity=0.088 Sum_probs=66.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEE-EccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWR-RVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~-~~~~~p~~r~~~ 210 (446)
.+..||..+.+-...-... .....+.....++.+++.|+.++ .+.+||. .+.+-. .+.. ....-.
T Consensus 228 ~i~~~d~~~~~~~~~~~~~---~~~i~~~~~~~~~~~l~~~~~d~-------~i~i~d~--~~~~~~~~~~~--~~~~i~ 293 (425)
T 1r5m_A 228 AIFVYQITEKTPTGKLIGH---HGPISVLEFNDTNKLLLSASDDG-------TLRIWHG--GNGNSQNCFYG--HSQSIV 293 (425)
T ss_dssp CEEEEETTCSSCSEEECCC---SSCEEEEEEETTTTEEEEEETTS-------CEEEECS--SSBSCSEEECC--CSSCEE
T ss_pred eEEEEEcCCCceeeeeccC---CCceEEEEECCCCCEEEEEcCCC-------EEEEEEC--CCCccceEecC--CCccEE
Confidence 4667787765322111111 11122333334666677776443 5888998 443321 1111 111223
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
+++...++ +++.|+.+ ..+.+||..+.+-...-... .....++++. ++.+++.|+.+ ..+..
T Consensus 294 ~~~~~~~~-~l~~~~~d------~~i~i~d~~~~~~~~~~~~~--~~~i~~~~~s~~~~~l~~~~~d--------g~i~i 356 (425)
T 1r5m_A 294 SASWVGDD-KVISCSMD------GSVRLWSLKQNTLLALSIVD--GVPIFAGRISQDGQKYAVAFMD--------GQVNV 356 (425)
T ss_dssp EEEEETTT-EEEEEETT------SEEEEEETTTTEEEEEEECT--TCCEEEEEECTTSSEEEEEETT--------SCEEE
T ss_pred EEEECCCC-EEEEEeCC------CcEEEEECCCCcEeEecccC--CccEEEEEEcCCCCEEEEEECC--------CeEEE
Confidence 34444446 55666543 57899998876533221111 1111233333 45666666643 26888
Q ss_pred EeCCCCc
Q 013264 290 YDPKTGS 296 (446)
Q Consensus 290 yd~~~~~ 296 (446)
||..+..
T Consensus 357 ~~~~~~~ 363 (425)
T 1r5m_A 357 YDLKKLN 363 (425)
T ss_dssp EECHHHH
T ss_pred EECCCCc
Confidence 9887655
No 125
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=85.03 E-value=12 Score=38.79 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=69.6
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC--------ccceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA--------RSFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~--------r~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
.++.||+... .+.++.+|..+.+..|+.-...+.. ....+.++.+ ++||+... -..
T Consensus 76 ~~g~vyv~~~--------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~-~~v~v~~~-------dg~ 139 (677)
T 1kb0_A 76 VDGIMYVSAS--------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWK-GKVYVGAW-------DGR 139 (677)
T ss_dssp ETTEEEEECG--------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEET-TEEEEECT-------TSE
T ss_pred ECCEEEEECC--------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEEC-CEEEEEcC-------CCE
Confidence 6899999854 2458899983334458776443211 1112344555 79988632 157
Q ss_pred EEEEECCCCc--EEecCC-C-CccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEcc
Q 013264 236 AEVYDVEADE--WRMLPE-M-DEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKFD 301 (446)
Q Consensus 236 ~~~yd~~t~~--W~~~~~-~-~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~ 301 (446)
+..+|..|++ |+.-.. - ........+.++.++.+|+..+.... .....+++||.++++ |+.-.
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~---~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEY---GVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTT---CCBCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEeccccc---CCCCEEEEEECCCCcEEEEecc
Confidence 8999998774 886432 1 11011112345678898875432110 124579999998875 87643
No 126
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=84.90 E-value=30 Score=33.74 Aligned_cols=57 Identities=7% Similarity=0.069 Sum_probs=36.3
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc--cCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV--KPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~--~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
++++|+|-|. ..|+||. .+++.... +.++ . --++.... +++|++-| +..+.||..
T Consensus 158 ~~~~yfFkG~---------~yw~yd~--~~~~~~~~~w~gi~--~-iDAA~~~~-g~~YfFkG--------~~y~rfd~~ 214 (460)
T 1qhu_A 158 DEGILFFQGN---------RKWFWDL--TTGTKKERSWPAVG--N-CTSALRWL-GRYYCFQG--------NQFLRFNPV 214 (460)
T ss_dssp SSEEEEEETT---------EEEEEET--TTTEEEEECCTTSC--C-CSEEEEET-TEEEEEET--------TEEEEECTT
T ss_pred CCeEEEEecc---------cEEEEec--ccceeecccCCCCC--c-cchheeeC-CceEEEEC--------CEEEEEcCc
Confidence 6888988762 5899999 66654321 2232 2 23444455 89999977 456778775
Q ss_pred CC
Q 013264 243 AD 244 (446)
Q Consensus 243 t~ 244 (446)
++
T Consensus 215 ~~ 216 (460)
T 1qhu_A 215 SG 216 (460)
T ss_dssp TC
T ss_pred cC
Confidence 54
No 127
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=84.86 E-value=21 Score=31.96 Aligned_cols=137 Identities=9% Similarity=0.035 Sum_probs=72.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc--Cccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV--ARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~--~r~~ 209 (446)
.++.||+.+++-..... + ....+.+...++.+|+.. .+.+++||+ .+.+.+.+..... +...
T Consensus 36 ~i~~~d~~~~~~~~~~~-~----~~~~~i~~~~dG~l~v~~---------~~~l~~~d~--~~g~~~~~~~~~~~~~~~~ 99 (297)
T 3g4e_A 36 KVCRWDSFTKQVQRVTM-D----APVSSVALRQSGGYVATI---------GTKFCALNW--KEQSAVVLATVDNDKKNNR 99 (297)
T ss_dssp EEEEEETTTCCEEEEEC-S----SCEEEEEEBTTSSEEEEE---------TTEEEEEET--TTTEEEEEEECCTTCSSEE
T ss_pred EEEEEECCCCcEEEEeC-C----CceEEEEECCCCCEEEEE---------CCeEEEEEC--CCCcEEEEEecCCCCCCCC
Confidence 57889998876544322 1 122344444567776653 236899999 7788877654321 1111
Q ss_pred -eEEEEECCcEEEEEeccCCC-----CCCCCeEEEEECCCCcEEec-CCCCccCCcceEEEEE--CCEEEEEeCCCCCCC
Q 013264 210 -FACAVVGASTVCVAGGHDGQ-----KNALKSAEVYDVEADEWRML-PEMDEERDECQGVCLE--GDRFFVVSGYGTESQ 280 (446)
Q Consensus 210 -~~~~~~~d~~iyv~GG~~~~-----~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~ 280 (446)
..+++-.+++||+..-.... ......+++||+.. +-..+ ..+..+ .++++. +..||+....
T Consensus 100 ~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~~~~~p----ngi~~spdg~~lyv~~~~----- 169 (297)
T 3g4e_A 100 FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFDQVDIS----NGLDWSLDHKIFYYIDSL----- 169 (297)
T ss_dssp EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEEEESBE----EEEEECTTSCEEEEEEGG-----
T ss_pred CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEeeccccc----cceEEcCCCCEEEEecCC-----
Confidence 22333335788875321110 01235788888753 33332 111111 344443 3468887542
Q ss_pred CcccCcEEEEeC--CCCce
Q 013264 281 GRFKPDAECYDP--KTGSW 297 (446)
Q Consensus 281 ~~~~~~v~~yd~--~~~~W 297 (446)
.+.+++||. .+++.
T Consensus 170 ---~~~i~~~~~d~~~G~~ 185 (297)
T 3g4e_A 170 ---SYSVDAFDYDLQTGQI 185 (297)
T ss_dssp ---GTEEEEEEECTTTCCE
T ss_pred ---CCcEEEEeccCCCCcc
Confidence 346888875 55554
No 128
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=84.65 E-value=29 Score=35.98 Aligned_cols=136 Identities=15% Similarity=0.268 Sum_probs=69.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+++....-... .....+.+...++..++.|+.+ ..+.+||. .++ |.....+........
T Consensus 78 ~i~vw~~~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~~d-------g~i~vw~~--~~~-~~~~~~~~~~~~~v~ 144 (814)
T 3mkq_A 78 RIRVFNYNTGEKVVDFEAH---PDYIRSIAVHPTKPYVLSGSDD-------LTVKLWNW--ENN-WALEQTFEGHEHFVM 144 (814)
T ss_dssp EEEEEETTTCCEEEEEECC---SSCEEEEEECSSSSEEEEEETT-------SEEEEEEG--GGT-SEEEEEEECCSSCEE
T ss_pred eEEEEECCCCcEEEEEecC---CCCEEEEEEeCCCCEEEEEcCC-------CEEEEEEC--CCC-ceEEEEEcCCCCcEE
Confidence 5678888877654322111 1122333333456566666643 36888998 544 222222221112222
Q ss_pred EEEE-C-CcEEEEEeccCCCCCCCCeEEEEECCCCc--EEecCCCCccCCcceEEEEE---CCEEEEEeCCCCCCCCccc
Q 013264 212 CAVV-G-ASTVCVAGGHDGQKNALKSAEVYDVEADE--WRMLPEMDEERDECQGVCLE---GDRFFVVSGYGTESQGRFK 284 (446)
Q Consensus 212 ~~~~-~-d~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 284 (446)
++.+ . ++..++.|+.+ ..+.+||..+.+ ........ ..- ..++.. ++.+++.|+.++
T Consensus 145 ~~~~~p~~~~~l~~~~~d------g~v~vwd~~~~~~~~~~~~~~~--~~v-~~~~~~~~~~~~~l~~~~~dg------- 208 (814)
T 3mkq_A 145 CVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTGQE--RGV-NYVDYYPLPDKPYMITASDDL------- 208 (814)
T ss_dssp EEEEETTEEEEEEEEETT------SEEEEEETTCSSCSEEEECCCT--TCC-CEEEECCSTTCCEEEEECTTS-------
T ss_pred EEEEEcCCCCEEEEEeCC------CeEEEEECCCCcceeEEecCCC--CCE-EEEEEEECCCCCEEEEEeCCC-------
Confidence 2333 2 35677777653 478899986553 22211111 111 233333 566777776432
Q ss_pred CcEEEEeCCCCce
Q 013264 285 PDAECYDPKTGSW 297 (446)
Q Consensus 285 ~~v~~yd~~~~~W 297 (446)
.+..||..+++-
T Consensus 209 -~i~~~d~~~~~~ 220 (814)
T 3mkq_A 209 -TIKIWDYQTKSC 220 (814)
T ss_dssp -EEEEEETTTTEE
T ss_pred -EEEEEECCCCcE
Confidence 689999987753
No 129
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=84.48 E-value=3.9 Score=37.40 Aligned_cols=114 Identities=10% Similarity=0.078 Sum_probs=61.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-C--CcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-G--ASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~--d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.+++.|+.++ .+.+||. .+.....+..+.........+.+ . ++.+.+.|+.+ ..+.+||
T Consensus 23 ~~g~~lasgs~D~-------~v~lwd~--~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D------~~v~iWd 87 (316)
T 3bg1_A 23 YYGTRLATCSSDR-------SVKIFDV--RNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYD------RKVIIWR 87 (316)
T ss_dssp GGGCEEEEEETTT-------EEEEEEE--ETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETT------SCEEEEC
T ss_pred CCCCEEEEEeCCC-------eEEEEEe--cCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECC------CEEEEEE
Confidence 4566777777543 5788888 55544333333222222223333 1 14566666654 4678999
Q ss_pred CCCCcEEecCCCCccCCcceEEEEEC---CEEEEEeCCCCCCCCcccCcEEEEeCCCC-ceEEc
Q 013264 241 VEADEWRMLPEMDEERDECQGVCLEG---DRFFVVSGYGTESQGRFKPDAECYDPKTG-SWSKF 300 (446)
Q Consensus 241 ~~t~~W~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~ 300 (446)
..+.+|..+..+........++++.. +.+++.|+.++ .+..||..++ .|...
T Consensus 88 ~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~--------~i~lwd~~~~~~~~~~ 143 (316)
T 3bg1_A 88 EENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDG--------AISLLTYTGEGQWEVK 143 (316)
T ss_dssp CSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSS--------CEEEEEECSSSCEEEC
T ss_pred CCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCC--------CEEEEecCCCCCccee
Confidence 98877754432221111112344432 45667777543 5788888765 57543
No 130
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=84.42 E-value=28 Score=32.91 Aligned_cols=95 Identities=12% Similarity=0.131 Sum_probs=54.8
Q ss_pred eEEEEeCcCCCCcEEEccCCccCccceE-EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEE
Q 013264 184 DVYVLDMVNNSSRWRRVKPMSVARSFFA-CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGV 262 (446)
Q Consensus 184 ~v~~~d~~~~t~~W~~~~~~p~~r~~~~-~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~ 262 (446)
.|+++|. .+.+..++-.+........ ++...|++..+.|+.+ ..+.+||..+++-...-.....+ ..+
T Consensus 126 tV~lWd~--~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~D------g~v~iWd~~~~~~~~~~~~h~~~---v~~ 194 (420)
T 4gga_A 126 SVYLWSA--SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRLRNMTSHSAR---VGS 194 (420)
T ss_dssp EEEEEET--TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SCEEEEETTTTEEEEEECCCSSC---EEE
T ss_pred EEEEEEC--CCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECC------CeEEEEEcCCCcEEEEEeCCCCc---eEE
Confidence 6888998 7777665544433333333 3333456777777754 46889999887543322222222 233
Q ss_pred EEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 263 CLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 263 ~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
...++.+.+.|+.+ ..+..+|..+...
T Consensus 195 ~s~~~~~l~sgs~d--------~~i~~~d~~~~~~ 221 (420)
T 4gga_A 195 LSWNSYILSSGSRS--------GHIHHHDVRVAEH 221 (420)
T ss_dssp EEEETTEEEEEETT--------SEEEEEETTSSSC
T ss_pred EeeCCCEEEEEeCC--------CceeEeeecccce
Confidence 34456666777653 2577888766543
No 131
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=83.98 E-value=25 Score=32.04 Aligned_cols=157 Identities=10% Similarity=0.045 Sum_probs=84.4
Q ss_pred EEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCC-------ccC-ccceEEEEECC-cEEEEEeccCC
Q 013264 159 CVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPM-------SVA-RSFFACAVVGA-STVCVAGGHDG 228 (446)
Q Consensus 159 ~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~-------p~~-r~~~~~~~~~d-~~iyv~GG~~~ 228 (446)
.+++.. ++.|||..++. .+.+.+||+ ....-..+... +.. ..-.++++-.+ +.|||....
T Consensus 147 ~ia~~~~~g~lyv~d~~~------~~~I~~~~~--~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-- 216 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYC------NSRIVQFSP--SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-- 216 (329)
T ss_dssp EEEECTTTCCEEEEECSS------CCEEEEECT--TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT--
T ss_pred EEEEeCCCCeEEEEeCCC------CCeEEEEcC--CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC--
Confidence 444433 78999997521 346899998 44443333211 111 11234555444 799998643
Q ss_pred CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCC
Q 013264 229 QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPS 308 (446)
Q Consensus 229 ~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~ 308 (446)
...+.+||+.+++....-..+..-....+++...+.+|+..|...-. ......+..+|+.+++....-. +.
T Consensus 217 ----~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~~~v~-~~~~~~v~~~~~~~g~~~~~~~----~~ 287 (329)
T 3fvz_A 217 ----NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIPGFLFAVNGKPYFG-DQEPVQGFVMNFSSGEIIDVFK----PV 287 (329)
T ss_dssp ----TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEETTEEEEEECCCCTT-CSCCCCEEEEETTTCCEEEEEC----CS
T ss_pred ----CCEEEEEECCCCcEEEEEeccccCCCcceeeecCCEEEEeCCCEEec-cCCCcEEEEEEcCCCeEEEEEc----CC
Confidence 25899999987766543222211111134455557788877742211 1123579999998887654421 11
Q ss_pred CCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 309 LSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 309 ~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
.........++++. ++.|||....++
T Consensus 288 ~~~~~~p~~ia~~~---dG~lyvad~~~~ 313 (329)
T 3fvz_A 288 RKHFDMPHDIVASE---DGTVYIGDAHTN 313 (329)
T ss_dssp SSCCSSEEEEEECT---TSEEEEEESSSC
T ss_pred CCccCCeeEEEECC---CCCEEEEECCCC
Confidence 11122223333332 258999876544
No 132
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=83.49 E-value=28 Score=32.18 Aligned_cols=111 Identities=6% Similarity=-0.043 Sum_probs=61.7
Q ss_pred EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCc-cCccceEEEEEC-CcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 167 KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMS-VARSFFACAVVG-ASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 167 ~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p-~~r~~~~~~~~~-d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
.+++.|+.++ .+.+||. .+.+....-... ....-.+++... ++.+++.|+.+ ..+.+||..+.
T Consensus 87 ~~l~s~~~dg-------~i~iwd~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d------~~i~iwd~~~~ 151 (383)
T 3ei3_B 87 TTVAVGSKGG-------DIILWDY--DVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIR------GATTLRDFSGS 151 (383)
T ss_dssp TEEEEEEBTS-------CEEEEET--TSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETT------TEEEEEETTSC
T ss_pred CEEEEEcCCC-------eEEEEeC--CCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCC------CEEEEEECCCC
Confidence 5777777543 5889999 666665543322 222222333333 24666766643 57889999887
Q ss_pred cEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 245 EWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 245 ~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
....+...........++++. ++.+++.|+.+ ..+..||+....-..+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------~~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDST--------GRLLLLGLDGHEIFKE 200 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETT--------SEEEEEETTSCEEEEE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCC--------CCEEEEECCCCEEEEe
Confidence 766654333211111233333 45666666643 3789999865444333
No 133
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=83.45 E-value=7.6 Score=35.19 Aligned_cols=136 Identities=13% Similarity=0.165 Sum_probs=65.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+..||..+.+-...-... .....+++...++.+++.|+.++ .+.+||. .+.+ .+..+.....-..
T Consensus 196 ~i~i~d~~~~~~~~~~~~h---~~~v~~~~~s~~~~~l~s~s~Dg-------~i~iwd~--~~~~--~~~~~~~~~~v~~ 261 (340)
T 4aow_A 196 LVKVWNLANCKLKTNHIGH---TGYLNTVTVSPDGSLCASGGKDG-------QAMLWDL--NEGK--HLYTLDGGDIINA 261 (340)
T ss_dssp CEEEEETTTTEEEEEECCC---SSCEEEEEECTTSSEEEEEETTC-------EEEEEET--TTTE--EEEEEECSSCEEE
T ss_pred EEEEEECCCCceeeEecCC---CCcEEEEEECCCCCEEEEEeCCC-------eEEEEEe--ccCc--eeeeecCCceEEe
Confidence 3566777766543321111 11123333434677777777543 5888998 4433 3322222222223
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEec-C-CCC-----ccCCcceEEEEE-CCEEEEEeCCCCCCCCcc
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRML-P-EMD-----EERDECQGVCLE-GDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~-~~~-----~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~ 283 (446)
++... +..++.++.+ ..+.+||..+..-... . ... .......++++. ++++++.|+.++
T Consensus 262 ~~~~~-~~~~~~~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg------ 328 (340)
T 4aow_A 262 LCFSP-NRYWLCAATG------PSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN------ 328 (340)
T ss_dssp EEECS-SSSEEEEEET------TEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS------
T ss_pred eecCC-CCceeeccCC------CEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC------
Confidence 33333 3344555542 4678899877643211 1 111 001111233332 456667777543
Q ss_pred cCcEEEEeCCCCc
Q 013264 284 KPDAECYDPKTGS 296 (446)
Q Consensus 284 ~~~v~~yd~~~~~ 296 (446)
.|..||+++++
T Consensus 329 --~v~iW~~~tGt 339 (340)
T 4aow_A 329 --LVRVWQVTIGT 339 (340)
T ss_dssp --CEEEEEEEC--
T ss_pred --EEEEEeCCCcC
Confidence 58889887764
No 134
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=83.43 E-value=29 Score=32.85 Aligned_cols=137 Identities=14% Similarity=0.165 Sum_probs=68.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+.+-... +.. ....-.+++...++.+++.|+.++ .+.+||. .+.+- +..+........
T Consensus 131 ~i~vwd~~~~~~~~~--l~~-h~~~V~~v~~~~~~~~l~sgs~D~-------~i~iwd~--~~~~~--~~~~~~h~~~V~ 196 (410)
T 1vyh_C 131 TIKVWDYETGDFERT--LKG-HTDSVQDISFDHSGKLLASCSADM-------TIKLWDF--QGFEC--IRTMHGHDHNVS 196 (410)
T ss_dssp CEEEEETTTCCCCEE--ECC-CSSCEEEEEECTTSSEEEEEETTS-------CCCEEET--TSSCE--EECCCCCSSCEE
T ss_pred eEEEEECCCCcEEEE--Eec-cCCcEEEEEEcCCCCEEEEEeCCC-------eEEEEeC--CCCce--eEEEcCCCCCEE
Confidence 456777766543221 111 111123333334677778887654 3667888 44432 222222222222
Q ss_pred EE-EECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEE
Q 013264 212 CA-VVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAEC 289 (446)
Q Consensus 212 ~~-~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~ 289 (446)
++ ...++..++.|+.+ ..+.+||..+..-... +.........+.. .++.+++.|+.++ .+..
T Consensus 197 ~v~~~p~~~~l~s~s~D------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~~~~g~~l~s~s~D~--------~v~v 260 (410)
T 1vyh_C 197 SVSIMPNGDHIVSASRD------KTIKMWEVQTGYCVKT--FTGHREWVRMVRPNQDGTLIASCSNDQ--------TVRV 260 (410)
T ss_dssp EEEECSSSSEEEEEETT------SEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS--------CEEE
T ss_pred EEEEeCCCCEEEEEeCC------CeEEEEECCCCcEEEE--EeCCCccEEEEEECCCCCEEEEEcCCC--------eEEE
Confidence 33 33335566666653 5788999987754321 1111111112222 2456677776543 6888
Q ss_pred EeCCCCceE
Q 013264 290 YDPKTGSWS 298 (446)
Q Consensus 290 yd~~~~~W~ 298 (446)
||..+..-.
T Consensus 261 wd~~~~~~~ 269 (410)
T 1vyh_C 261 WVVATKECK 269 (410)
T ss_dssp EETTTCCEE
T ss_pred EECCCCcee
Confidence 998877543
No 135
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=83.42 E-value=25 Score=31.68 Aligned_cols=137 Identities=11% Similarity=-0.016 Sum_probs=76.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.++.||+..+ .......+ ...++.++..+++|||...... ...++++|+ .+.+.+.+...+..+...+
T Consensus 54 ~I~~~d~~g~-~~~~~~~~----~~p~gia~~~dG~l~vad~~~~-----~~~v~~~d~--~~g~~~~~~~~~~~~~~~g 121 (306)
T 2p4o_A 54 EIVSITPDGN-QQIHATVE----GKVSGLAFTSNGDLVATGWNAD-----SIPVVSLVK--SDGTVETLLTLPDAIFLNG 121 (306)
T ss_dssp EEEEECTTCC-EEEEEECS----SEEEEEEECTTSCEEEEEECTT-----SCEEEEEEC--TTSCEEEEEECTTCSCEEE
T ss_pred eEEEECCCCc-eEEEEeCC----CCceeEEEcCCCcEEEEeccCC-----cceEEEEcC--CCCeEEEEEeCCCccccCc
Confidence 4677887754 22221122 2234455545778988753211 125888998 7777776655554454455
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc---EEecCC----CC-ccCCcceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE---WRMLPE----MD-EERDECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~---W~~~~~----~~-~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
.+...++.+|+.-. ....++++|+.+.+ |..-+. .+ .......++...++.||+.--.
T Consensus 122 ~~~~~~~~~~v~d~------~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~~-------- 187 (306)
T 2p4o_A 122 ITPLSDTQYLTADS------YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNTE-------- 187 (306)
T ss_dssp EEESSSSEEEEEET------TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEETT--------
T ss_pred ccccCCCcEEEEEC------CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeCC--------
Confidence 55455467888632 12588999987652 321111 11 1111113444456689997532
Q ss_pred cCcEEEEeCCC
Q 013264 284 KPDAECYDPKT 294 (446)
Q Consensus 284 ~~~v~~yd~~~ 294 (446)
.+.+++||+..
T Consensus 188 ~~~I~~~~~~~ 198 (306)
T 2p4o_A 188 KMLLLRIPVDS 198 (306)
T ss_dssp TTEEEEEEBCT
T ss_pred CCEEEEEEeCC
Confidence 34799999875
No 136
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=83.26 E-value=26 Score=31.63 Aligned_cols=114 Identities=7% Similarity=0.047 Sum_probs=67.0
Q ss_pred ceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeE
Q 013264 157 CQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 157 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~ 236 (446)
....++..++.||+..-. ...++++|+ ... ....... +..-+++++..++++||....... ..+
T Consensus 34 pegia~~~~g~lyv~d~~-------~~~I~~~d~--~g~-~~~~~~~--~~~p~gia~~~dG~l~vad~~~~~----~~v 97 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHE-------VGEIVSITP--DGN-QQIHATV--EGKVSGLAFTSNGDLVATGWNADS----IPV 97 (306)
T ss_dssp EEEEEECTTSCEEEEETT-------TTEEEEECT--TCC-EEEEEEC--SSEEEEEEECTTSCEEEEEECTTS----CEE
T ss_pred cceEEECCCCCEEEEeCC-------CCeEEEECC--CCc-eEEEEeC--CCCceeEEEcCCCcEEEEeccCCc----ceE
Confidence 345555457789998532 346999999 553 2222111 122344555545789987642211 357
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.+||+.+++.+.+...+..+.. .+.+. .++.+|+.... ...++++|+.++
T Consensus 98 ~~~d~~~g~~~~~~~~~~~~~~-~g~~~~~~~~~~v~d~~--------~g~i~~~d~~~~ 148 (306)
T 2p4o_A 98 VSLVKSDGTVETLLTLPDAIFL-NGITPLSDTQYLTADSY--------RGAIWLIDVVQP 148 (306)
T ss_dssp EEEECTTSCEEEEEECTTCSCE-EEEEESSSSEEEEEETT--------TTEEEEEETTTT
T ss_pred EEEcCCCCeEEEEEeCCCcccc-CcccccCCCcEEEEECC--------CCeEEEEeCCCC
Confidence 8899988888776555444432 33333 35577876421 237999999865
No 137
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=83.14 E-value=15 Score=34.57 Aligned_cols=112 Identities=13% Similarity=0.280 Sum_probs=61.9
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~y 239 (446)
++...+++.++.|+.++ .+.+||. .+.+-...-.- ....-.+++...++...+.|+.+ ..+.+|
T Consensus 129 v~~s~dg~~l~s~~~d~-------~i~iwd~--~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~s~s~d------~~v~iw 192 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDR-------LIRIWDI--ENRKIVMILQG-HEQDIYSLDYFPSGDKLVSGSGD------RTVRIW 192 (393)
T ss_dssp EEECTTSSEEEEEETTS-------CEEEEET--TTTEEEEEECC-CSSCEEEEEECTTSSEEEEEETT------SEEEEE
T ss_pred EEECCCCCEEEEEcCCC-------eEEEEEC--CCCcEEEEEcc-CCCCEEEEEEcCCCCEEEEecCC------CcEEEE
Confidence 33334677777777543 5889999 65543322111 11112233333345555666543 578899
Q ss_pred ECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE
Q 013264 240 DVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 240 d~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
|..+.+-...-.... ...++++. ++++++.|+.++ .+..||..++.-.
T Consensus 193 d~~~~~~~~~~~~~~---~v~~~~~~~~~~~~l~~~s~d~--------~v~iwd~~~~~~~ 242 (393)
T 1erj_A 193 DLRTGQCSLTLSIED---GVTTVAVSPGDGKYIAAGSLDR--------AVRVWDSETGFLV 242 (393)
T ss_dssp ETTTTEEEEEEECSS---CEEEEEECSTTCCEEEEEETTS--------CEEEEETTTCCEE
T ss_pred ECCCCeeEEEEEcCC---CcEEEEEECCCCCEEEEEcCCC--------cEEEEECCCCcEE
Confidence 998876543222111 11233333 567777777543 6889999887543
No 138
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=82.89 E-value=27 Score=31.61 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=48.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+.+-...-... .....+.....++..++.|+.+ ..+.+||. .+.+-...-. ....-.+
T Consensus 55 ~i~vwd~~~~~~~~~~~~h---~~~v~~~~~~~~~~~l~s~~~d-------g~i~iwd~--~~~~~~~~~~--~~~~v~~ 120 (369)
T 3zwl_B 55 SASVWYSLNGERLGTLDGH---TGTIWSIDVDCFTKYCVTGSAD-------YSIKLWDV--SNGQCVATWK--SPVPVKR 120 (369)
T ss_dssp CEEEEETTTCCEEEEECCC---SSCEEEEEECTTSSEEEEEETT-------TEEEEEET--TTCCEEEEEE--CSSCEEE
T ss_pred EEEEEeCCCchhhhhhhhc---CCcEEEEEEcCCCCEEEEEeCC-------CeEEEEEC--CCCcEEEEee--cCCCeEE
Confidence 4677887766543321111 1112233333356677777654 36889999 6565433322 2222223
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
++...+++.++.++.+.. .....+.+||..+.
T Consensus 121 ~~~~~~~~~l~~~~~~~~-~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 121 VEFSPCGNYFLAILDNVM-KNPGSINIYEIERD 152 (369)
T ss_dssp EEECTTSSEEEEEECCBT-TBCCEEEEEEEEEC
T ss_pred EEEccCCCEEEEecCCcc-CCCCEEEEEEecCC
Confidence 333334555555554311 12357788886554
No 139
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=82.22 E-value=31 Score=31.81 Aligned_cols=107 Identities=18% Similarity=0.211 Sum_probs=56.9
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
++.+++.|+.++ .+.+||. .+.+....- ....... +++...++..++.|+.+ ..+.+||..+
T Consensus 209 ~g~~l~sgs~Dg-------~v~~wd~--~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~s~s~D------~~v~lwd~~~ 271 (354)
T 2pbi_B 209 TGNTFVSGGCDK-------KAMVWDM--RSGQCVQAF--ETHESDVNSVRYYPSGDAFASGSDD------ATCRLYDLRA 271 (354)
T ss_dssp SCCEEEEEETTS-------CEEEEET--TTCCEEEEE--CCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCCC-------eEEEEEC--CCCcEEEEe--cCCCCCeEEEEEeCCCCEEEEEeCC------CeEEEEECCC
Confidence 356777777653 5889999 666543321 1111122 22333345667777654 4678999887
Q ss_pred CcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 244 DEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 244 ~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
++-...-..........++.+. ++.+.+.|+.+ ..+..||..+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d--------~~i~vwd~~~~~ 317 (354)
T 2pbi_B 272 DREVAIYSKESIIFGASSVDFSLSGRLLFAGYND--------YTINVWDVLKGS 317 (354)
T ss_dssp TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETT--------SCEEEEETTTCS
T ss_pred CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECC--------CcEEEEECCCCc
Confidence 6433221111111121233332 45666666643 268999987764
No 140
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=81.70 E-value=16 Score=33.76 Aligned_cols=154 Identities=11% Similarity=0.042 Sum_probs=76.0
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCE-EEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRK-LLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
..++.+|....++..+.... ...........-+++ |++.+...+. ....++++|+ .+.+...+...+. .
T Consensus 216 ~~l~~~d~~~~~~~~l~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~---~~~~l~~~d~--~~g~~~~l~~~~~--~- 285 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEHA--EGESCTHEFWIPDGSAMAYVSYFKGQ---TDRVIYKANP--ETLENEEVMVMPP--C- 285 (396)
T ss_dssp CCCEEEETTSCCCEESSCCC--TTEEEEEEEECTTSSCEEEEEEETTT---CCEEEEEECT--TTCCEEEEEECCS--E-
T ss_pred ceEEEEECCCCceeEeeccC--CCccccceEECCCCCEEEEEecCCCC---ccceEEEEEC--CCCCeEEeeeCCC--C-
Confidence 35777888777776665421 011112223323454 4443321111 1234999999 7777776654442 1
Q ss_pred eEEEEEC-CcEEEEEeccCCC----------CCCCCeEEEEECCCCcEEecCCCCccC---------CcceEEEEECC-E
Q 013264 210 FACAVVG-ASTVCVAGGHDGQ----------KNALKSAEVYDVEADEWRMLPEMDEER---------DECQGVCLEGD-R 268 (446)
Q Consensus 210 ~~~~~~~-d~~iyv~GG~~~~----------~~~~~~~~~yd~~t~~W~~~~~~~~~r---------~~~~~~~~~~~-~ 268 (446)
..+... |++++++.+.... ......++++|..+++...+...+... ........-++ .
T Consensus 286 -~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 364 (396)
T 3c5m_A 286 -SHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDG 364 (396)
T ss_dssp -EEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSE
T ss_pred -CCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCe
Confidence 133333 4666666542210 012368999999888766554322210 00011112234 5
Q ss_pred EEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 269 FFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 269 lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
|++.....+ ...++.+|+.++.++.+.
T Consensus 365 l~~~s~~~~------~~~l~~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 365 VLFTSDFEG------VPAIYIADVPESYKHLEH 391 (396)
T ss_dssp EEEEECTTS------SCEEEEEECCTTCC----
T ss_pred EEEEecCCC------CceEEEEEEccccccccc
Confidence 665544322 236899999888887664
No 141
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=81.32 E-value=34 Score=31.74 Aligned_cols=236 Identities=8% Similarity=0.006 Sum_probs=109.6
Q ss_pred eeEEEEECCCCcEEecCCCCC----CCCccceEEEEe----eCCEEEEEeCc------CCCCCCccCeEEEEeCc---CC
Q 013264 131 YGLTIFNASNGTWERIRPHVG----RIPMFCQCVAVP----ASRKLLLIGGW------DPITLEPVPDVYVLDMV---NN 193 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~----~~p~~~~~~~~~----~~~~lyv~GG~------~~~~~~~~~~v~~~d~~---~~ 193 (446)
-.+..+|+..+.=..+ ..+. ..+......+.. -.+.|+|+.-. .+......+.+.+||+. +.
T Consensus 35 g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg 113 (334)
T 2p9w_A 35 GRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENS 113 (334)
T ss_dssp TEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTC
T ss_pred CEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCC
Confidence 3578899986654444 3331 012212123332 35788886210 11111124679999992 11
Q ss_pred CCcEEE-ccCCccC-------ccc--eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC---cEEecCCCCccCCcce
Q 013264 194 SSRWRR-VKPMSVA-------RSF--FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD---EWRMLPEMDEERDECQ 260 (446)
Q Consensus 194 t~~W~~-~~~~p~~-------r~~--~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~r~~~~ 260 (446)
...|.. ++..... +.. --+++-.+|.+||.+... ...++++|+... .|-.-.+....+.+..
T Consensus 114 ~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~-----~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~n 188 (334)
T 2p9w_A 114 KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALG-----MPAIARVSADGKTVSTFAWESGNGGQRPGYS 188 (334)
T ss_dssp CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEES-----SCEEEEECTTSCCEEEEEECCCCSSSCCSCS
T ss_pred CEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCC-----CCeEEEEeCCCCEEeeeeecCCCcccccCcc
Confidence 233432 1111111 211 233333358999986642 146888888754 2543333233344446
Q ss_pred EEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceE--EEEecCCCcccEE-EEEcCC
Q 013264 261 GVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTA--TITSYRLQQHQWL-WFLGKE 335 (446)
Q Consensus 261 ~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~--~~~~~~~~~~~~l-yv~GG~ 335 (446)
++++. +..|++..+ . ..+.+||+.+-...+++....+........-+ ..-.++ ++ +|..+.
T Consensus 189 GIv~~pdg~~Liv~~~-~--------g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G-----~vllV~~~~ 254 (334)
T 2p9w_A 189 GITFDPHSNKLIAFGG-P--------RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGN-----ESVLVGARA 254 (334)
T ss_dssp EEEEETTTTEEEEESS-S--------SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETT-----EEEEEEEET
T ss_pred eEEEeCCCCEEEEEcC-C--------CeEEEEcCCCCcceeecccccCCcccccCcccccccccCC-----EEEEEEcCC
Confidence 77777 446666654 2 26999998853221121100000001111112 122344 66 554433
Q ss_pred CCC--CceeEeceEEeeccCCCCcCCCCCCCCeEEEeeccccCCCceEEEEeccCCC
Q 013264 336 QQQ--NGEVVKGKIVSSIVPLPKSVTEGSSSPCVSVTTLHNSQQQQKVFVMTGNGGR 390 (446)
Q Consensus 336 ~~~--~~~~~~W~~~~~~~~~p~~~~~~R~~~~~~~~~~~~~~~~~~l~v~GG~~~~ 390 (446)
.+. -...+.|+.....+..|.... .+ +.++.++-... .+++||++.+.-..
T Consensus 255 ~~~~~l~S~DgW~sa~~~g~~~~~~~-~~-g~tt~t~~~~~--~~~~iYvv~~~f~~ 307 (334)
T 2p9w_A 255 PYAISFRSWDNWKSANIKKTKRSELQ-NS-GFTAVADYYQG--SEQGLYAVSAFFDN 307 (334)
T ss_dssp TEEEEEECSSTTSEEEEEEEECGGGG-SS-CEEEEEEEEET--TEEEEEEEECCGGG
T ss_pred CCEEEEECCCCcceeEEeeeecCccc-cC-ceeEEEEeccc--cCCeEEEEeeecCC
Confidence 322 112234977766655554332 22 33333320000 02899999976443
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=81.16 E-value=16 Score=32.92 Aligned_cols=135 Identities=4% Similarity=0.025 Sum_probs=71.1
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcE--EEccCCccCc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRW--RRVKPMSVAR 207 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W--~~~~~~p~~r 207 (446)
..+..||+.+++....-..+. .. .+.+..-++ .||+.+.. ...++++|+ .+.+- ..+..-..+.
T Consensus 20 ~~v~~~d~~~~~~~~~~~~~~--~~--~~~~~s~dg~~l~~~~~~-------~~~i~~~d~--~~~~~~~~~~~~~~~~~ 86 (331)
T 3u4y_A 20 RRISFFSTDTLEILNQITLGY--DF--VDTAITSDCSNVVVTSDF-------CQTLVQIET--QLEPPKVVAIQEGQSSM 86 (331)
T ss_dssp TEEEEEETTTCCEEEEEECCC--CE--EEEEECSSSCEEEEEEST-------TCEEEEEEC--SSSSCEEEEEEECSSCC
T ss_pred CeEEEEeCcccceeeeEEccC--Cc--ceEEEcCCCCEEEEEeCC-------CCeEEEEEC--CCCceeEEecccCCCCc
Confidence 358899999998866544431 11 133333344 47777653 237999999 66653 2222222222
Q ss_pred cceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCccc
Q 013264 208 SFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFK 284 (446)
Q Consensus 208 ~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~ 284 (446)
++++...| ..|| ++...+. ...+.+||..+++-...-+. .... .++++. ++ .||+.+...
T Consensus 87 --~~~~~s~dg~~l~-~~~~~~~---~~~i~v~d~~~~~~~~~~~~--~~~~-~~~~~spdg~~l~~~~~~~-------- 149 (331)
T 3u4y_A 87 --ADVDITPDDQFAV-TVTGLNH---PFNMQSYSFLKNKFISTIPI--PYDA-VGIAISPNGNGLILIDRSS-------- 149 (331)
T ss_dssp --CCEEECTTSSEEE-ECCCSSS---SCEEEEEETTTTEEEEEEEC--CTTE-EEEEECTTSSCEEEEEETT--------
T ss_pred --cceEECCCCCEEE-EecCCCC---cccEEEEECCCCCeEEEEEC--CCCc-cceEECCCCCEEEEEecCC--------
Confidence 21333333 4566 3322211 13899999998876543222 1111 344443 33 588775532
Q ss_pred Cc-EEEEeCCCC
Q 013264 285 PD-AECYDPKTG 295 (446)
Q Consensus 285 ~~-v~~yd~~~~ 295 (446)
.. +..||...+
T Consensus 150 ~~~i~~~~~~~~ 161 (331)
T 3u4y_A 150 ANTVRRFKIDAD 161 (331)
T ss_dssp TTEEEEEEECTT
T ss_pred CceEEEEEECCC
Confidence 24 777776543
No 143
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=81.15 E-value=23 Score=39.06 Aligned_cols=112 Identities=11% Similarity=0.193 Sum_probs=61.4
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
+.+...++..+++|+.++ .+.+||. .+........-.... -.+++...+++..+.|+.+ ..+.+
T Consensus 966 ~~~~sp~g~~l~~g~~~g-------~i~i~d~--~~~~~~~~~~~h~~~-v~~l~~s~dg~~l~s~~~d------g~i~v 1029 (1249)
T 3sfz_A 966 CCCLSPHLEYVAFGDEDG-------AIKIIEL--PNNRVFSSGVGHKKA-VRHIQFTADGKTLISSSED------SVIQV 1029 (1249)
T ss_dssp EEEECTTSSEEEEEETTS-------CCEEEET--TTTSCEEECCCCSSC-CCCEEECSSSSCEEEECSS------SBEEE
T ss_pred EEEEcCCCCEEEEEcCCC-------CEEEEEc--CCCceeeecccCCCc-eEEEEECCCCCEEEEEcCC------CEEEE
Confidence 334445667777776543 4778898 555433221111111 1223333346666777643 47899
Q ss_pred EECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 239 YDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
||..+++.......... ..++++..+..++.++.+ ..+..||..+++-
T Consensus 1030 wd~~~~~~~~~~~~~~~---v~~~~~~~~~~l~~~~~d--------g~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1030 WNWQTGDYVFLQAHQET---VKDFRLLQDSRLLSWSFD--------GTVKVWNVITGRI 1077 (1249)
T ss_dssp EETTTTEEECCBCCSSC---EEEEEECSSSEEEEEESS--------SEEEEEETTTTCC
T ss_pred EECCCCceEEEecCCCc---EEEEEEcCCCcEEEEECC--------CcEEEEECCCCce
Confidence 99999887654422211 133444444445555543 2689999988753
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=80.88 E-value=30 Score=34.45 Aligned_cols=105 Identities=12% Similarity=0.095 Sum_probs=58.1
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeEEEEEC-
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDV- 241 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~- 241 (446)
.++.+|+.+.. .+.+.++|. .+.+-... ++....-|.+++-.| ..+|+.+. + +.+.+||.
T Consensus 147 p~~~~~vs~~~-------d~~V~v~D~--~t~~~~~~--i~~g~~~~~v~~spdg~~l~v~~~-d------~~V~v~D~~ 208 (543)
T 1nir_A 147 LPNLFSVTLRD-------AGQIALVDG--DSKKIVKV--IDTGYAVHISRMSASGRYLLVIGR-D------ARIDMIDLW 208 (543)
T ss_dssp GGGEEEEEEGG-------GTEEEEEET--TTCCEEEE--EECSTTEEEEEECTTSCEEEEEET-T------SEEEEEETT
T ss_pred CCCEEEEEEcC-------CCeEEEEEC--CCceEEEE--EecCcccceEEECCCCCEEEEECC-C------CeEEEEECc
Confidence 46788888764 346889999 66654322 221222444444444 46666643 1 68999999
Q ss_pred -CCCcEEecCCCCccCCcceEEEEE-----CC-EEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 242 -EADEWRMLPEMDEERDECQGVCLE-----GD-RFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 242 -~t~~W~~~~~~~~~r~~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
.+.+- +..++....- ..+++. ++ .+|+... ..+.+.++|..+.+=
T Consensus 209 ~~t~~~--~~~i~~g~~p-~~va~sp~~~~dg~~l~v~~~--------~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 209 AKEPTK--VAEIKIGIEA-RSVESSKFKGYEDRYTIAGAY--------WPPQFAIMDGETLEP 260 (543)
T ss_dssp SSSCEE--EEEEECCSEE-EEEEECCSTTCTTTEEEEEEE--------ESSEEEEEETTTCCE
T ss_pred CCCCcE--EEEEecCCCc-ceEEeCCCcCCCCCEEEEEEc--------cCCeEEEEecccccc
Confidence 56542 2222222221 334443 34 5666432 134788999887653
No 145
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=80.86 E-value=16 Score=32.73 Aligned_cols=112 Identities=13% Similarity=0.200 Sum_probs=58.0
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEEC---CcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG---ASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~---d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.+++.|+.++ .+.+||.......++.+..+........++.+. |+.+++.|+.+ ..+.+||
T Consensus 21 ~~~~~l~~~~~dg-------~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d------g~v~vwd 87 (351)
T 3f3f_A 21 FYGRHVATCSSDQ-------HIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYD------KTVKLWE 87 (351)
T ss_dssp SSSSEEEEEETTS-------EEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT------SCEEEEE
T ss_pred CCCCEEEEeeCCC-------eEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC------CeEEEEe
Confidence 4566666666543 577777722244455544333333333334432 25666777654 4677888
Q ss_pred CCCC-------cEEecCCCCccCCcceEEEEEC---CEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 241 VEAD-------EWRMLPEMDEERDECQGVCLEG---DRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 241 ~~t~-------~W~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
..+. .|..+..+........+++... +.+++.|+.+ ..+..||+.+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d--------g~v~iwd~~~~~ 145 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND--------GILRLYDALEPS 145 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT--------CEEEEEECSSTT
T ss_pred cCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC--------CcEEEecCCChH
Confidence 7664 3443333222222223344432 5556666643 268899987653
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=80.66 E-value=20 Score=32.16 Aligned_cols=142 Identities=12% Similarity=0.104 Sum_probs=71.5
Q ss_pred eEEEEECCCCcEEecCCCCCCCCc-cceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc----
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPM-FCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV---- 205 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~-~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~---- 205 (446)
.+.++|+.+.+-...-..+. .. ..+..+..-++ .+|+.+.. ...++++|+ .+.+-...-..+.
T Consensus 12 ~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~v~~~~-------~~~v~~~d~--~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVITIAD--AGPTPMVPMVAPGGRIAYATVNK-------SESLVKIDL--VTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEETTTTEEEEEEECTT--CTTCCCCEEECTTSSEEEEEETT-------TTEEEEEET--TTCCEEEEEECCBTTEE
T ss_pred eEEEEECCCCcEEEEEEcCC--CCCCccceEEcCCCCEEEEEeCC-------CCeEEEEEC--CCCCeEeeEEcCCcccc
Confidence 57889988876544322221 00 12234443444 67777653 346999999 6665433211111
Q ss_pred CccceEEEEECCc-EEEEEeccC---CCCC--CCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCC
Q 013264 206 ARSFFACAVVGAS-TVCVAGGHD---GQKN--ALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGT 277 (446)
Q Consensus 206 ~r~~~~~~~~~d~-~iyv~GG~~---~~~~--~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~ 277 (446)
......++...|+ .||+..... .... ....+.+||..+.+....-..... . .++++. ++ .||+..
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~--~-~~~~~s~dg~~l~~~~---- 153 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQ--I-TMLAWARDGSKLYGLG---- 153 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSS--C-CCEEECTTSSCEEEES----
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCC--c-ceeEECCCCCEEEEeC----
Confidence 0012233333334 777774211 0000 126899999988765433222211 1 223332 33 476652
Q ss_pred CCCCcccCcEEEEeCCCCceE
Q 013264 278 ESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 278 ~~~~~~~~~v~~yd~~~~~W~ 298 (446)
..+..||+.+++-.
T Consensus 154 -------~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 154 -------RDLHVMDPEAGTLV 167 (337)
T ss_dssp -------SSEEEEETTTTEEE
T ss_pred -------CeEEEEECCCCcEe
Confidence 25889999887643
No 147
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=80.62 E-value=20 Score=31.69 Aligned_cols=113 Identities=13% Similarity=0.213 Sum_probs=59.4
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc-eEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF-FACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~-~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
+.....++. ++.|+.+ ..+.+||. .+.+-. ..+...... .+++...+++ ++.|+.+ ..+.
T Consensus 189 ~~~~~~~~~-~~~~~~d-------g~i~i~d~--~~~~~~--~~~~~~~~~i~~~~~~~~~~-l~~~~~d------g~v~ 249 (313)
T 3odt_A 189 HLAVVDDGH-FISCSND-------GLIKLVDM--HTGDVL--RTYEGHESFVYCIKLLPNGD-IVSCGED------RTVR 249 (313)
T ss_dssp EEEEEETTE-EEEEETT-------SEEEEEET--TTCCEE--EEEECCSSCEEEEEECTTSC-EEEEETT------SEEE
T ss_pred EEEEcCCCe-EEEccCC-------CeEEEEEC--Cchhhh--hhhhcCCceEEEEEEecCCC-EEEEecC------CEEE
Confidence 344445667 6666643 36889999 544422 122111122 2333333454 4555532 5789
Q ss_pred EEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 238 VYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+||..+.+-...-..+... ..+++.. +++ ++.|+.+ ..+..||+.++++....
T Consensus 250 iwd~~~~~~~~~~~~~~~~--i~~~~~~~~~~-~~~~~~d--------g~i~iw~~~~~~~~~~~ 303 (313)
T 3odt_A 250 IWSKENGSLKQVITLPAIS--IWSVDCMSNGD-IIVGSSD--------NLVRIFSQEKSRWASED 303 (313)
T ss_dssp EECTTTCCEEEEEECSSSC--EEEEEECTTSC-EEEEETT--------SCEEEEESCGGGCCC--
T ss_pred EEECCCCceeEEEeccCce--EEEEEEccCCC-EEEEeCC--------CcEEEEeCCCCceeehh
Confidence 9999887654332222211 1233333 445 4556643 26999999998875543
No 148
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=80.49 E-value=33 Score=30.96 Aligned_cols=139 Identities=14% Similarity=0.256 Sum_probs=68.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeC---CEEEEEeCcCCCCCCccCeEEEEeCcCCCCc--EEEccCCccC
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPAS---RKLLLIGGWDPITLEPVPDVYVLDMVNNSSR--WRRVKPMSVA 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~--W~~~~~~p~~ 206 (446)
.+.+||..+++...+.... ......++....+ +.+++.|+.++ .+.+||. .+.. -..+.....+
T Consensus 45 ~v~iw~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~l~~~~~dg-------~i~iwd~--~~~~~~~~~~~~~~~~ 113 (357)
T 3i2n_A 45 VIQLYEIQHGDLKLLREIE--KAKPIKCGTFGATSLQQRYLATGDFGG-------NLHIWNL--EAPEMPVYSVKGHKEI 113 (357)
T ss_dssp EEEEEEECSSSEEEEEEEE--ESSCEEEEECTTCCTTTCCEEEEETTS-------CEEEECT--TSCSSCSEEECCCSSC
T ss_pred EEEEEeCCCCcccceeeec--ccCcEEEEEEcCCCCCCceEEEecCCC-------eEEEEeC--CCCCccEEEEEecccc
Confidence 4778888877765443222 1111122222222 46777776543 5888998 5443 2222211111
Q ss_pred ccceEEEEE------CCcEEEEEeccCCCCCCCCeEEEEECCCCc--EEecCCCCcc-CCcceEEEE-----ECCEEEEE
Q 013264 207 RSFFACAVV------GASTVCVAGGHDGQKNALKSAEVYDVEADE--WRMLPEMDEE-RDECQGVCL-----EGDRFFVV 272 (446)
Q Consensus 207 r~~~~~~~~------~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~-r~~~~~~~~-----~~~~lyv~ 272 (446)
-.++... .++..++.|+.+ ..+.+||..+.. ...+...... .....+++. .++.+++.
T Consensus 114 --v~~~~~~~~~~~s~~~~~l~~~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 185 (357)
T 3i2n_A 114 --INAIDGIGGLGIGEGAPEIVTGSRD------GTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCA 185 (357)
T ss_dssp --EEEEEEESGGGCC-CCCEEEEEETT------SCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEE
T ss_pred --eEEEeeccccccCCCccEEEEEeCC------CeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEE
Confidence 1111111 124566666643 467899988764 3333222211 111122321 35666666
Q ss_pred eCCCCCCCCcccCcEEEEeCCCCce
Q 013264 273 SGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 273 GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
|+.+ ..+..||..+.+-
T Consensus 186 ~~~d--------~~i~i~d~~~~~~ 202 (357)
T 3i2n_A 186 GYDN--------GDIKLFDLRNMAL 202 (357)
T ss_dssp EETT--------SEEEEEETTTTEE
T ss_pred EccC--------CeEEEEECccCce
Confidence 6643 3689999988764
No 149
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=80.35 E-value=32 Score=30.79 Aligned_cols=63 Identities=16% Similarity=0.199 Sum_probs=35.4
Q ss_pred cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 218 STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 218 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+.+++.|+.+ ..+.+||..+.+-...-.... ....++++. ++++++.|+.++ .+..||..+.+
T Consensus 185 ~~~~~s~~~d------~~i~i~d~~~~~~~~~~~~h~--~~v~~~~~s~~~~~l~s~s~Dg--------~i~iwd~~~~~ 248 (340)
T 4aow_A 185 NPIIVSCGWD------KLVKVWNLANCKLKTNHIGHT--GYLNTVTVSPDGSLCASGGKDG--------QAMLWDLNEGK 248 (340)
T ss_dssp SCEEEEEETT------SCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEEETTC--------EEEEEETTTTE
T ss_pred CcEEEEEcCC------CEEEEEECCCCceeeEecCCC--CcEEEEEECCCCCEEEEEeCCC--------eEEEEEeccCc
Confidence 3455666543 467889988776543221111 111233333 456777777543 68889988764
No 150
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=80.32 E-value=9 Score=34.47 Aligned_cols=113 Identities=8% Similarity=0.083 Sum_probs=59.3
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-C--CcEEEEEeccCCCCCCCCeE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-G--ASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~--d~~iyv~GG~~~~~~~~~~~ 236 (446)
++...+++.++.|+.++ .+.+||. .+...+.+..+.........+.+ . ++.+.+.|+.+ ..+
T Consensus 15 ~~~s~~g~~las~s~D~-------~v~iw~~--~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D------~~v 79 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDK-------TIKIFEV--EGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYD------GKV 79 (297)
T ss_dssp EEECTTSSEEEEEETTS-------CEEEEEB--CSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETT------TEE
T ss_pred EEECCCCCEEEEEeCCC-------EEEEEec--CCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCC------CEE
Confidence 33334667777777543 4778887 54433323222222122222333 1 14566677654 578
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEEEC---CEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCLEG---DRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~---~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.+||..+.+|..+..+........+++... +.+++.|+.++ .+..||+.+.
T Consensus 80 ~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~--------~v~~wd~~~~ 133 (297)
T 2pm7_B 80 MIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDG--------KVSVVEFKEN 133 (297)
T ss_dssp EEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTS--------EEEEEEBCSS
T ss_pred EEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCC--------cEEEEEecCC
Confidence 899998887765433222112212333332 45666666432 5788887765
No 151
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=79.66 E-value=17 Score=36.88 Aligned_cols=120 Identities=13% Similarity=0.167 Sum_probs=68.2
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeC-cCCCCcEEEccCCcc-----Ccc---ceEEEE--ECCcE----EEEEeccCC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDM-VNNSSRWRRVKPMSV-----ARS---FFACAV--VGAST----VCVAGGHDG 228 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~-~~~t~~W~~~~~~p~-----~r~---~~~~~~--~~d~~----iyv~GG~~~ 228 (446)
.++.||+.+.. ...++.+|. .+.+..|+.-..... .++ ..+.++ .+ ++ ||+...
T Consensus 61 ~~g~vyv~~~~-------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~-g~~~~rV~v~t~--- 129 (599)
T 1w6s_A 61 VDGKMYIHTSF-------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGD-GKTPALILKTQL--- 129 (599)
T ss_dssp ETTEEEEECST-------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCC-SSSCCEEEEECT---
T ss_pred ECCEEEEEeCC-------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecC-CcceeEEEEEcC---
Confidence 68999998652 235888887 556667887544321 111 122333 34 66 887532
Q ss_pred CCCCCCeEEEEECCCCc--EEecCCCCccC-CcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEEcc
Q 013264 229 QKNALKSAEVYDVEADE--WRMLPEMDEER-DECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSKFD 301 (446)
Q Consensus 229 ~~~~~~~~~~yd~~t~~--W~~~~~~~~~r-~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~~~ 301 (446)
-..+..+|..|.+ |+.-..-.... ....+-++.++++|+-.+.... .....+++||.++++ |+.-.
T Consensus 130 ----dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~---g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 130 ----DGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAEL---GVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp ----TSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGG---TCCCEEEEEETTTCCEEEEEES
T ss_pred ----CCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEeccccc---CCCCeEEEEECCCCcEEEEEcC
Confidence 1578899988774 88532211111 1112335678888874321100 023479999999875 87543
No 152
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=79.62 E-value=35 Score=33.71 Aligned_cols=133 Identities=11% Similarity=0.086 Sum_probs=68.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc-Cccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV-ARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~-~r~~~ 210 (446)
.+..||..+.+... ..+.. ......+.+...++.+++.|+.++ .+.+||. .+.+- +..+.. .....
T Consensus 468 ~i~~~~~~~~~~~~-~~~~~-~~~~v~~~~~s~~g~~l~~~~~dg-------~i~iw~~--~~~~~--~~~~~~~h~~~v 534 (615)
T 1pgu_A 468 TIQVFKLSDLEVSF-DLKTP-LRAKPSYISISPSETYIAAGDVMG-------KILLYDL--QSREV--KTSRWAFRTSKI 534 (615)
T ss_dssp CEEEEETTEEEEEE-ECSSC-CSSCEEEEEECTTSSEEEEEETTS-------CEEEEET--TTTEE--EECCSCCCSSCE
T ss_pred eEEEEECCCccccc-cccCC-ccCceEEEEECCCCCEEEEcCCCC-------eEEEeeC--CCCcc--eeEeecCCCCce
Confidence 36677777765532 22221 112223333334777888887543 5889999 54443 333332 22222
Q ss_pred EEEEE-C----------CcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCCcceEEEEECCEEEEEeCCCC
Q 013264 211 ACAVV-G----------ASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGT 277 (446)
Q Consensus 211 ~~~~~-~----------d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~ 277 (446)
..+.+ . ++++.+.|+.+ ..+.+||..+. .-..+..-..+. . ......+++ .+.+|.++
T Consensus 535 ~~~~~sp~~~~~~~~~~~~~~l~~~~~d------g~i~iw~~~~~~~~~~~~~~h~~~v-~-~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 535 NAISWKPAEKGANEEEIEEDLVATGSLD------TNIFIYSVKRPMKIIKALNAHKDGV-N-NLLWETPST-LVSSGADA 605 (615)
T ss_dssp EEEEECCCC------CCSCCEEEEEETT------SCEEEEESSCTTCCEEETTSSTTCE-E-EEEEEETTE-EEEEETTS
T ss_pred eEEEEcCccccccccccCCCEEEEEcCC------CcEEEEECCCCceechhhhcCccce-E-EEEEcCCCC-eEEecCCc
Confidence 23333 2 36777777654 47889998875 233322211111 1 122344677 66676543
Q ss_pred CCCCcccCcEEEEeCCC
Q 013264 278 ESQGRFKPDAECYDPKT 294 (446)
Q Consensus 278 ~~~~~~~~~v~~yd~~~ 294 (446)
.+..||+++
T Consensus 606 --------~v~iw~~~~ 614 (615)
T 1pgu_A 606 --------CIKRWNVVL 614 (615)
T ss_dssp --------CEEEEEEC-
T ss_pred --------eEEEEeeec
Confidence 577777654
No 153
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=79.54 E-value=33 Score=31.10 Aligned_cols=140 Identities=6% Similarity=-0.066 Sum_probs=72.1
Q ss_pred eeEEEEECCCCcEEecCC-CCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCC---CcEEEccCCcc
Q 013264 131 YGLTIFNASNGTWERIRP-HVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNS---SRWRRVKPMSV 205 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~-~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t---~~W~~~~~~p~ 205 (446)
-.+..||+.+.+...+.. +. .....++..++ .|||.-.. .+.+++|++ .. ...+....++.
T Consensus 165 g~v~~~d~~~~~~~~~~~~~~-----~p~gia~~~dg~~lyv~d~~-------~~~I~~~~~--~~~~~~~~~~~~~~~g 230 (322)
T 2fp8_A 165 GRLIKYDPSTKETTLLLKELH-----VPGGAEVSADSSFVLVAEFL-------SHQIVKYWL--EGPKKGTAEVLVKIPN 230 (322)
T ss_dssp EEEEEEETTTTEEEEEEEEES-----CCCEEEECTTSSEEEEEEGG-------GTEEEEEES--SSTTTTCEEEEEECSS
T ss_pred ceEEEEeCCCCEEEEeccCCc-----cCcceEECCCCCEEEEEeCC-------CCeEEEEEC--CCCcCCccceEEeCCC
Confidence 357788888776554321 11 11234443344 58887331 357999998 53 23333332322
Q ss_pred CccceEEEEECCcEEEEEeccCCCC----CCCCeEEEEECCCCcEEecCCCC-ccCCcceEEEEECCEEEEEeCCCCCCC
Q 013264 206 ARSFFACAVVGASTVCVAGGHDGQK----NALKSAEVYDVEADEWRMLPEMD-EERDECQGVCLEGDRFFVVSGYGTESQ 280 (446)
Q Consensus 206 ~r~~~~~~~~~d~~iyv~GG~~~~~----~~~~~~~~yd~~t~~W~~~~~~~-~~r~~~~~~~~~~~~lyv~GG~~~~~~ 280 (446)
-..+++-.++.|||........ .....+.+||+....-..+.... .......+++..+++|||....
T Consensus 231 ---P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~~~~~~~~~~~g~L~v~~~~----- 302 (322)
T 2fp8_A 231 ---PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNILEVIPLPPPFAGEHFEQIQEHDGLLYIGTLF----- 302 (322)
T ss_dssp ---EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCEEEEEECCTTTTTSCCCEEEEETTEEEEECSS-----
T ss_pred ---CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCEEEEEECCCCCccccceEEEEeCCEEEEeecC-----
Confidence 2334444457899886431100 01256889998655444332211 0011123455678899987542
Q ss_pred CcccCcEEEEeCCCC
Q 013264 281 GRFKPDAECYDPKTG 295 (446)
Q Consensus 281 ~~~~~~v~~yd~~~~ 295 (446)
.+.|.+|++..+
T Consensus 303 ---~~~i~~~~~~~~ 314 (322)
T 2fp8_A 303 ---HGSVGILVYDKK 314 (322)
T ss_dssp ---CSEEEEEEC---
T ss_pred ---CCceEEEecccc
Confidence 246888887643
No 154
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=79.54 E-value=33 Score=30.37 Aligned_cols=138 Identities=14% Similarity=0.153 Sum_probs=69.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+++-..+-.+.. ....-.+++...+++.++.|+.++ .+.+||. .+.+-...- ........
T Consensus 46 tV~iWd~~tg~~~~~~~~~~-~~~~V~~v~~~~~~~~l~sgs~Dg-------~v~iw~~--~~~~~~~~~--~~h~~~~~ 113 (318)
T 4ggc_A 46 SVYLWSASSGDILQLLQMEQ-PGEYISSVAWIKEGNYLAVGTSSA-------EVQLWDV--QQQKRLRNM--TSHSARVG 113 (318)
T ss_dssp EEEEEETTTCCEEEEEECCS-TTCCEEEEEECTTSSEEEEEETTS-------EEEEEET--TTTEEEEEE--ECCSSCEE
T ss_pred EEEEEECCCCCEEEEEEecC-CCCeEEEEEECCCCCEEEEEECCC-------cEEEeec--CCceeEEEe--cCccceEE
Confidence 57889999888765443332 122223444445777788887643 5888999 656533221 11112223
Q ss_pred EEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEe
Q 013264 212 CAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 212 ~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+.... +.+.+.|+.+ ..+..++..+......................++++.+.|+.++ .+..||
T Consensus 114 ~~~~~-~~~l~s~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~--------~i~iwd 178 (318)
T 4ggc_A 114 SLSWN-SYILSSGSRS------GHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN--------LVNVWP 178 (318)
T ss_dssp EEEEE-TTEEEEEETT------SEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTS--------CEEEEE
T ss_pred EeecC-CCEEEEEecC------CceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCc--------ceeEEE
Confidence 33344 4555555543 34455565544332211000011110112223445556665432 588899
Q ss_pred CCCCc
Q 013264 292 PKTGS 296 (446)
Q Consensus 292 ~~~~~ 296 (446)
..+++
T Consensus 179 ~~~~~ 183 (318)
T 4ggc_A 179 SAPGE 183 (318)
T ss_dssp SSCBT
T ss_pred CCCCc
Confidence 87654
No 155
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=79.52 E-value=37 Score=30.95 Aligned_cols=133 Identities=8% Similarity=-0.006 Sum_probs=72.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC--cc-
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA--RS- 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~--r~- 208 (446)
.++.||+.+++...+.. + ....+.+...++.+|+... ..+++||+ .+.+.+.+...+.. ..
T Consensus 72 ~i~~~d~~~~~~~~~~~-~----~~v~~i~~~~dg~l~v~~~---------~gl~~~d~--~~g~~~~~~~~~~~~~~~~ 135 (326)
T 2ghs_A 72 ELHELHLASGRKTVHAL-P----FMGSALAKISDSKQLIASD---------DGLFLRDT--ATGVLTLHAELESDLPGNR 135 (326)
T ss_dssp EEEEEETTTTEEEEEEC-S----SCEEEEEEEETTEEEEEET---------TEEEEEET--TTCCEEEEECSSTTCTTEE
T ss_pred EEEEEECCCCcEEEEEC-C----CcceEEEEeCCCeEEEEEC---------CCEEEEEC--CCCcEEEEeeCCCCCCCCC
Confidence 57889998876654432 2 1223344446788887641 24899999 77887766443211 11
Q ss_pred ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCc
Q 013264 209 FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~ 286 (446)
...+++-.++++|+.............+++|| +.+.+.+.. ......+.++. ++ .||+.... .+.
T Consensus 136 ~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~---~~~~~~~i~~s~dg~~lyv~~~~--------~~~ 202 (326)
T 2ghs_A 136 SNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA---DISIPNSICFSPDGTTGYFVDTK--------VNR 202 (326)
T ss_dssp EEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE---EESSEEEEEECTTSCEEEEEETT--------TCE
T ss_pred CCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC---CCcccCCeEEcCCCCEEEEEECC--------CCE
Confidence 12233333578887532211111235788888 566554421 10111234443 33 68887542 247
Q ss_pred EEEEeCC
Q 013264 287 AECYDPK 293 (446)
Q Consensus 287 v~~yd~~ 293 (446)
+++||..
T Consensus 203 I~~~d~~ 209 (326)
T 2ghs_A 203 LMRVPLD 209 (326)
T ss_dssp EEEEEBC
T ss_pred EEEEEcc
Confidence 8999975
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=79.19 E-value=37 Score=30.84 Aligned_cols=145 Identities=11% Similarity=0.062 Sum_probs=80.2
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--cEEEccCC------
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--RWRRVKPM------ 203 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~W~~~~~~------ 203 (446)
.+..+|+.+.+-....... .-...+..++..++.||+.... ...+.+||+ ... .-..+...
T Consensus 70 ~i~~~d~~~g~~~~~~~~~--~~~~p~gia~d~~g~l~v~d~~-------~~~v~~~~~--~g~~~~~~~~~~~~~~g~~ 138 (329)
T 3fvz_A 70 TILVIDPNNAEILQSSGKN--LFYLPHGLSIDTDGNYWVTDVA-------LHQVFKLDP--HSKEGPLLILGRSMQPGSD 138 (329)
T ss_dssp CEEEECTTTCCEEEEECTT--TCSSEEEEEECTTSCEEEEETT-------TTEEEEECT--TCSSCCSEEESBTTBCCCS
T ss_pred cEEEEECCCCeEEeccCCC--ccCCceEEEECCCCCEEEEECC-------CCEEEEEeC--CCCeEEEEEecccCCCCCC
Confidence 5888999877765422211 1112244555457889998653 346999999 544 22223211
Q ss_pred ccCc-cceEEEEEC-CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCC-------CccCCcceEEEEE-C-CEEEEE
Q 013264 204 SVAR-SFFACAVVG-ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEM-------DEERDECQGVCLE-G-DRFFVV 272 (446)
Q Consensus 204 p~~r-~~~~~~~~~-d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-------~~~r~~~~~~~~~-~-~~lyv~ 272 (446)
...- .-..+++.. ++.|||..++. ...+.+||+....-..+... +.......++++. + +.|||.
T Consensus 139 ~~~~~~P~~ia~~~~~g~lyv~d~~~-----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~ 213 (329)
T 3fvz_A 139 QNHFCQPTDVAVEPSTGAVFVSDGYC-----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVA 213 (329)
T ss_dssp TTCCSSEEEEEECTTTCCEEEEECSS-----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEE
T ss_pred ccccCCCcEEEEeCCCCeEEEEeCCC-----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEE
Confidence 0111 122344442 48999997531 25789999655433333211 1111112455554 3 799998
Q ss_pred eCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 273 SGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 273 GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
... .+.|.+||+++++....
T Consensus 214 d~~--------~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 214 DRE--------NGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp ETT--------TTEEEEEETTTCCEEEE
T ss_pred ECC--------CCEEEEEECCCCcEEEE
Confidence 653 24799999997776543
No 157
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=78.87 E-value=8.3 Score=35.06 Aligned_cols=145 Identities=14% Similarity=0.126 Sum_probs=70.9
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCcc----
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSV---- 205 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~---- 205 (446)
..+.++|+.+++....-..+. ....+..+...++ .+|+.+.. ...+++||+ .+.+-...-..+.
T Consensus 21 ~~v~~~d~~~~~~~~~~~~~~--~~~~~~~~~s~dg~~~~v~~~~-------~~~i~~~d~--~t~~~~~~~~~~~~~~~ 89 (349)
T 1jmx_B 21 NNLHVVDVASDTVYKSCVMPD--KFGPGTAMMAPDNRTAYVLNNH-------YGDIYGIDL--DTCKNTFHANLSSVPGE 89 (349)
T ss_dssp TEEEEEETTTTEEEEEEECSS--CCSSCEEEECTTSSEEEEEETT-------TTEEEEEET--TTTEEEEEEESCCSTTE
T ss_pred CeEEEEECCCCcEEEEEecCC--CCCCceeEECCCCCEEEEEeCC-------CCcEEEEeC--CCCcEEEEEEccccccc
Confidence 357899998887654322221 0012334443444 57777642 346999999 6665443222211
Q ss_pred -CccceEEEEECCc-EEEEEecc-----CCCCCCCCeEEEEECCCCcEEec-CCCCccCCcceEEEE-ECCEEEEEeCCC
Q 013264 206 -ARSFFACAVVGAS-TVCVAGGH-----DGQKNALKSAEVYDVEADEWRML-PEMDEERDECQGVCL-EGDRFFVVSGYG 276 (446)
Q Consensus 206 -~r~~~~~~~~~d~-~iyv~GG~-----~~~~~~~~~~~~yd~~t~~W~~~-~~~~~~r~~~~~~~~-~~~~lyv~GG~~ 276 (446)
...-..++...|+ .||+.+.. .........+.+||..+++-... .....+..- .++++ -++++|+.++
T Consensus 90 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~s~dg~l~~~~~-- 166 (349)
T 1jmx_B 90 VGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQV-YLMRAADDGSLYVAGP-- 166 (349)
T ss_dssp EEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSC-CCEEECTTSCEEEESS--
T ss_pred ccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcc-cceeECCCCcEEEccC--
Confidence 1112333443334 56655421 00000125889999877432111 111112211 23333 3556777422
Q ss_pred CCCCCcccCcEEEEeCCCCceE
Q 013264 277 TESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 277 ~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
.+.+||+.+++-.
T Consensus 167 ---------~i~~~d~~~~~~~ 179 (349)
T 1jmx_B 167 ---------DIYKMDVKTGKYT 179 (349)
T ss_dssp ---------SEEEECTTTCCEE
T ss_pred ---------cEEEEeCCCCcee
Confidence 4889999887644
No 158
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=78.81 E-value=42 Score=31.24 Aligned_cols=109 Identities=12% Similarity=0.177 Sum_probs=58.4
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
..++.+++.|+.++ .+.+||. .+..-...-. .....-.+++...++++.+.|+.+ ..+.+||..
T Consensus 106 ~~~~~~l~~~~~dg-------~i~iwd~--~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~d------~~i~iwd~~ 169 (420)
T 3vl1_A 106 KLQMRRFILGTTEG-------DIKVLDS--NFNLQREIDQ-AHVSEITKLKFFPSGEALISSSQD------MQLKIWSVK 169 (420)
T ss_dssp CSSSCEEEEEETTS-------CEEEECT--TSCEEEEETT-SSSSCEEEEEECTTSSEEEEEETT------SEEEEEETT
T ss_pred ecCCCEEEEEECCC-------CEEEEeC--CCcceeeecc-cccCccEEEEECCCCCEEEEEeCC------CeEEEEeCC
Confidence 34677888887543 5889998 5554433211 111122233333346666666643 478999987
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
+.+-. ..+........++++. ++.+++.|+.++ .+..||+.+++-
T Consensus 170 ~~~~~--~~~~~h~~~v~~~~~~~~~~~l~s~~~d~--------~v~iwd~~~~~~ 215 (420)
T 3vl1_A 170 DGSNP--RTLIGHRATVTDIAIIDRGRNVLSASLDG--------TIRLWECGTGTT 215 (420)
T ss_dssp TCCCC--EEEECCSSCEEEEEEETTTTEEEEEETTS--------CEEEEETTTTEE
T ss_pred CCcCc--eEEcCCCCcEEEEEEcCCCCEEEEEcCCC--------cEEEeECCCCce
Confidence 65311 1111111111334443 455566666532 589999988753
No 159
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=78.57 E-value=20 Score=34.00 Aligned_cols=107 Identities=11% Similarity=0.154 Sum_probs=57.2
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc-eEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF-FACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~-~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
-++.+++.|+.++ .+.+||. .+.+-... +...... .+++...++++.+.|+.+ ..+.+||..
T Consensus 118 p~~~~l~s~s~Dg-------~i~vwd~--~~~~~~~~--l~~h~~~V~~v~~~~~~~~l~sgs~D------~~i~iwd~~ 180 (410)
T 1vyh_C 118 PVFSVMVSASEDA-------TIKVWDY--ETGDFERT--LKGHTDSVQDISFDHSGKLLASCSAD------MTIKLWDFQ 180 (410)
T ss_dssp SSSSEEEEEESSS-------CEEEEET--TTCCCCEE--ECCCSSCEEEEEECTTSSEEEEEETT------SCCCEEETT
T ss_pred CCCCEEEEEeCCC-------eEEEEEC--CCCcEEEE--EeccCCcEEEEEEcCCCCEEEEEeCC------CeEEEEeCC
Confidence 3566777777543 5888998 55543221 1111111 223333346777777764 345688887
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
+.+-.. .+........++++. ++..++.|+.+ ..+..||..++.-
T Consensus 181 ~~~~~~--~~~~h~~~V~~v~~~p~~~~l~s~s~D--------~~i~~wd~~~~~~ 226 (410)
T 1vyh_C 181 GFECIR--TMHGHDHNVSSVSIMPNGDHIVSASRD--------KTIKMWEVQTGYC 226 (410)
T ss_dssp SSCEEE--CCCCCSSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTCCE
T ss_pred CCceeE--EEcCCCCCEEEEEEeCCCCEEEEEeCC--------CeEEEEECCCCcE
Confidence 654322 222111111233333 45566667654 2689999988754
No 160
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=78.34 E-value=39 Score=30.76 Aligned_cols=106 Identities=10% Similarity=0.141 Sum_probs=58.9
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
++.+++.|+.++ .+.+||. .+.+-...........-.+++...++.+++.|+.+ ..+.+||..+.
T Consensus 138 ~~~~l~s~s~dg-------~i~~wd~--~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~d------g~i~iwd~~~~ 202 (343)
T 3lrv_A 138 NTEYFIWADNRG-------TIGFQSY--EDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPD------GILDVYNLSSP 202 (343)
T ss_dssp -CCEEEEEETTC-------CEEEEES--SSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTT------SCEEEEESSCT
T ss_pred CCCEEEEEeCCC-------cEEEEEC--CCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCC------CEEEEEECCCC
Confidence 566777777543 5889999 66665443222222223344444457787877754 47899999877
Q ss_pred cEE--ecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 245 EWR--MLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 245 ~W~--~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+-. .+..-. .....++++. ++...+.|+ + +.+..||+.+.+
T Consensus 203 ~~~~~~~~~~h--~~~v~~l~fs~~g~~l~s~~-~--------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 203 DQASSRFPVDE--EAKIKEVKFADNGYWMVVEC-D--------QTVVCFDLRKDV 246 (343)
T ss_dssp TSCCEECCCCT--TSCEEEEEECTTSSEEEEEE-S--------SBEEEEETTSST
T ss_pred CCCccEEeccC--CCCEEEEEEeCCCCEEEEEe-C--------CeEEEEEcCCCC
Confidence 532 222101 1111333443 445555555 2 168999998764
No 161
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=78.23 E-value=42 Score=30.88 Aligned_cols=94 Identities=18% Similarity=0.228 Sum_probs=49.9
Q ss_pred eEEEEeCcCCCCcEEEccCCccCccceEEEEEC---CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcce
Q 013264 184 DVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG---ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQ 260 (446)
Q Consensus 184 ~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~---d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~ 260 (446)
.+.+||. .+.+-... +........+..+. ++..++.|+.+ ..+.+||..+.+....-.... ....
T Consensus 177 ~v~lwd~--~~~~~~~~--~~~h~~~v~~~~~~~~~~g~~l~sgs~D------g~v~~wd~~~~~~~~~~~~h~--~~v~ 244 (354)
T 2pbi_B 177 TCALWDV--ESGQLLQS--FHGHGADVLCLDLAPSETGNTFVSGGCD------KKAMVWDMRSGQCVQAFETHE--SDVN 244 (354)
T ss_dssp EEEEEET--TTCCEEEE--EECCSSCEEEEEECCCSSCCEEEEEETT------SCEEEEETTTCCEEEEECCCS--SCEE
T ss_pred cEEEEeC--CCCeEEEE--EcCCCCCeEEEEEEeCCCCCEEEEEeCC------CeEEEEECCCCcEEEEecCCC--CCeE
Confidence 5888998 65553221 11111111222221 24667777754 468899998876543211111 1112
Q ss_pred EEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 261 GVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 261 ~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
++++. ++.+++.|+.++ .+..||+.++.-
T Consensus 245 ~v~~~p~~~~l~s~s~D~--------~v~lwd~~~~~~ 274 (354)
T 2pbi_B 245 SVRYYPSGDAFASGSDDA--------TCRLYDLRADRE 274 (354)
T ss_dssp EEEECTTSSEEEEEETTS--------CEEEEETTTTEE
T ss_pred EEEEeCCCCEEEEEeCCC--------eEEEEECCCCcE
Confidence 33333 456667777543 688999988753
No 162
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=77.43 E-value=50 Score=31.36 Aligned_cols=18 Identities=17% Similarity=0.008 Sum_probs=14.2
Q ss_pred cceEEEEECCcEEEEEec
Q 013264 208 SFFACAVVGASTVCVAGG 225 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG 225 (446)
..|+++...+++||..|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 457777777799999984
No 163
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=77.24 E-value=46 Score=30.87 Aligned_cols=142 Identities=10% Similarity=0.125 Sum_probs=70.3
Q ss_pred eEEEEECCCCcEEecCCCC--CCCCccceEEEE-eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--cEEEccCCccC
Q 013264 132 GLTIFNASNGTWERIRPHV--GRIPMFCQCVAV-PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--RWRRVKPMSVA 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~--~~~p~~~~~~~~-~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~W~~~~~~p~~ 206 (446)
.+.+||..+++-...-... ........+... ..++.+++.|+.++ .+.+||. ... .-..+.. ..
T Consensus 181 ~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-------~v~~wd~--~~~~~~~~~~~~--h~ 249 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDT-------TVRLWDL--RITSRAVRTYHG--HE 249 (380)
T ss_dssp CEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTS-------CEEEEET--TTTCCCCEEECC--CS
T ss_pred cEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCC-------eEEEEEC--CCCCcceEEECC--cC
Confidence 4677888777654322111 000111112222 12667888888654 4888998 422 1111111 11
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCcc-----CCcceEEEE-ECCEEEEEeCCCCCCC
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEE-----RDECQGVCL-EGDRFFVVSGYGTESQ 280 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~-----r~~~~~~~~-~~~~lyv~GG~~~~~~ 280 (446)
..-.+++...+++.++.|+.+ ..+.+||..+++-...-..... .....++++ .++++.+.|+.++
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D------~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg--- 320 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDD------GTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNG--- 320 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSS------SCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTS---
T ss_pred CCeEEEEEecCCCeEEEEcCC------CeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCC---
Confidence 111233444446677777754 4678999988754322111110 001123333 3566666666432
Q ss_pred CcccCcEEEEeCCCCceE
Q 013264 281 GRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 281 ~~~~~~v~~yd~~~~~W~ 298 (446)
.+..||..+.+-.
T Consensus 321 -----~i~vwd~~~~~~~ 333 (380)
T 3iz6_a 321 -----DCYVWDTLLAEMV 333 (380)
T ss_dssp -----CEEEEETTTCCEE
T ss_pred -----CEEEEECCCCceE
Confidence 6899999877543
No 164
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=77.22 E-value=28 Score=32.06 Aligned_cols=157 Identities=12% Similarity=0.035 Sum_probs=79.8
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCE-EEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRK-LLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR 207 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~-lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r 207 (446)
...++.+|..+++...+.... .........- ++. |++... ... ......++++|. .+..++.+.. ..+.
T Consensus 167 ~~~l~~~d~~~g~~~~~~~~~----~~~~~~~~sp~dg~~l~~~~~-~~~-~~~~~~l~~~d~--~~~~~~~l~~-~~~~ 237 (396)
T 3c5m_A 167 TCRLIKVDIETGELEVIHQDT----AWLGHPIYRPFDDSTVGFCHE-GPH-DLVDARMWLVNE--DGSNVRKIKE-HAEG 237 (396)
T ss_dssp CEEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEEC-SCS-SSCSCCCEEEET--TSCCCEESSC-CCTT
T ss_pred cceEEEEECCCCcEEeeccCC----cccccceECCCCCCEEEEEec-CCC-CCCCceEEEEEC--CCCceeEeec-cCCC
Confidence 446889999988877665322 1122222222 344 444432 111 111257999999 7777777654 2111
Q ss_pred cce-EEEEECCcE-EEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCC------
Q 013264 208 SFF-ACAVVGAST-VCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTE------ 278 (446)
Q Consensus 208 ~~~-~~~~~~d~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~------ 278 (446)
... ..+...|++ |+......+. ....++++|..+++...+...+. . .....- +++++++.+....
T Consensus 238 ~~~~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~---~-~~~~s~~dg~~l~~~~~~~p~~~~~~ 311 (396)
T 3c5m_A 238 ESCTHEFWIPDGSAMAYVSYFKGQ--TDRVIYKANPETLENEEVMVMPP---C-SHLMSNFDGSLMVGDGCDAPVDVADA 311 (396)
T ss_dssp EEEEEEEECTTSSCEEEEEEETTT--CCEEEEEECTTTCCEEEEEECCS---E-EEEEECSSSSEEEEEECCC-------
T ss_pred ccccceEECCCCCEEEEEecCCCC--ccceEEEEECCCCCeEEeeeCCC---C-CCCccCCCCceEEEecCCcceeeccc
Confidence 112 223333444 4444322221 12359999999988777654432 1 222223 6666665442100
Q ss_pred --CCCcccCcEEEEeCCCCceEEcc
Q 013264 279 --SQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 279 --~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
........++.+|+.+++...+.
T Consensus 312 ~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 312 DSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ---CCCCCCEEEEEETTTTBCCEEE
T ss_pred cccccCCCCcEEEEecccCceEEcc
Confidence 00001247899999887765554
No 165
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=77.09 E-value=39 Score=29.97 Aligned_cols=64 Identities=0% Similarity=0.003 Sum_probs=34.6
Q ss_pred cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECC-----EEEEEeCCCCCCCCcccCcEEEEeC
Q 013264 218 STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGD-----RFFVVSGYGTESQGRFKPDAECYDP 292 (446)
Q Consensus 218 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~-----~lyv~GG~~~~~~~~~~~~v~~yd~ 292 (446)
+..+++|+.+ ..+..++..+.+...+..+........++++..+ .+++.|+.++ .+..||.
T Consensus 182 ~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg--------~i~iwd~ 247 (351)
T 3f3f_A 182 PEKLAVSALE------QAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDG--------RIRIFKI 247 (351)
T ss_dssp CCEEEEEETT------EEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTS--------CEEEEEE
T ss_pred CcEEEEecCC------CcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCC--------eEEEEeC
Confidence 4566666643 2445566666666544444332222234444443 6777777543 5777777
Q ss_pred CCC
Q 013264 293 KTG 295 (446)
Q Consensus 293 ~~~ 295 (446)
.+.
T Consensus 248 ~~~ 250 (351)
T 3f3f_A 248 TEK 250 (351)
T ss_dssp EEC
T ss_pred CCC
Confidence 653
No 166
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=76.79 E-value=32 Score=31.88 Aligned_cols=113 Identities=12% Similarity=0.078 Sum_probs=57.9
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
+.+...++.+++.|+.++ .+.+||. ....-..+.... ..-.+++...+++.++.++.+ ..+.+
T Consensus 113 ~~~~s~~~~~l~~~~~dg-------~i~i~~~--~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~d------~~i~i 175 (425)
T 1r5m_A 113 CLAWSHDGNSIVTGVENG-------ELRLWNK--TGALLNVLNFHR--APIVSVKWNKDGTHIISMDVE------NVTIL 175 (425)
T ss_dssp EEEECTTSSEEEEEETTS-------CEEEEET--TSCEEEEECCCC--SCEEEEEECTTSSEEEEEETT------CCEEE
T ss_pred EEEEcCCCCEEEEEeCCC-------eEEEEeC--CCCeeeeccCCC--ccEEEEEECCCCCEEEEEecC------CeEEE
Confidence 333334667777777543 4788886 445444443211 112233333345555666543 46789
Q ss_pred EECCCCcEEecCCCCccCC-------------cceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 239 YDVEADEWRMLPEMDEERD-------------ECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~-------------~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
||..+.+-...-....... ...++....+..+++|+.+ ..+..||..+++
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------g~i~~~d~~~~~ 238 (425)
T 1r5m_A 176 WNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPK--------GAIFVYQITEKT 238 (425)
T ss_dssp EETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGG--------GCEEEEETTCSS
T ss_pred EECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCC--------CeEEEEEcCCCc
Confidence 9988776543322221110 0122333334445666643 368999998764
No 167
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=76.49 E-value=63 Score=32.05 Aligned_cols=135 Identities=13% Similarity=0.071 Sum_probs=68.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.++|..+.+-...-... ...|.++..-++ .||+.+. + +.+.+||+ ...+-+.+..++....-.
T Consensus 160 ~V~v~D~~t~~~~~~i~~g----~~~~~v~~spdg~~l~v~~~-d-------~~V~v~D~--~~~t~~~~~~i~~g~~p~ 225 (543)
T 1nir_A 160 QIALVDGDSKKIVKVIDTG----YAVHISRMSASGRYLLVIGR-D-------ARIDMIDL--WAKEPTKVAEIKIGIEAR 225 (543)
T ss_dssp EEEEEETTTCCEEEEEECS----TTEEEEEECTTSCEEEEEET-T-------SEEEEEET--TSSSCEEEEEEECCSEEE
T ss_pred eEEEEECCCceEEEEEecC----cccceEEECCCCCEEEEECC-C-------CeEEEEEC--cCCCCcEEEEEecCCCcc
Confidence 5778898887654322211 113555444444 5666543 2 46899998 322333333333333333
Q ss_pred EEEEEC----C-cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCC-----------CccCCcceEEEEE--CCEEEEE
Q 013264 211 ACAVVG----A-STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEM-----------DEERDECQGVCLE--GDRFFVV 272 (446)
Q Consensus 211 ~~~~~~----d-~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~-----------~~~r~~~~~~~~~--~~~lyv~ 272 (446)
.+++-. | ..+|+..-. ...+.++|..+.+=...-+. +.++- .+++.. ++.+|+.
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~------~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v--~~i~~s~~~~~~~vs 297 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYW------PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV--AAIIASHEHPEFIVN 297 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEE------SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE--EEEEECSSSSEEEEE
T ss_pred eEEeCCCcCCCCCEEEEEEcc------CCeEEEEeccccccceeecccCcccCccccccCCce--EEEEECCCCCEEEEE
Confidence 444442 3 456665422 25778899877653322111 11121 233332 4466665
Q ss_pred eCCCCCCCCcccCcEEEEeCCCCc
Q 013264 273 SGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 273 GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
... ...+..+|..+.+
T Consensus 298 ~~~--------~g~i~vvd~~~~~ 313 (543)
T 1nir_A 298 VKE--------TGKVLLVNYKDID 313 (543)
T ss_dssp ETT--------TTEEEEEECTTSS
T ss_pred ECC--------CCeEEEEEecCCC
Confidence 432 2478899987753
No 168
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=75.47 E-value=35 Score=31.48 Aligned_cols=118 Identities=11% Similarity=0.110 Sum_probs=58.9
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc-cCCc-c---CccceEEEEECCcEEEEEeccCCCCCCC
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV-KPMS-V---ARSFFACAVVGASTVCVAGGHDGQKNAL 233 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~-~~~p-~---~r~~~~~~~~~d~~iyv~GG~~~~~~~~ 233 (446)
+....-++ +++.|+.+ ..+.+||. .+.+-... .... . ...-.+++...++++++.|+.++. .
T Consensus 191 ~~~~~~~~-~l~~~~~d-------g~i~i~d~--~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~---~ 257 (397)
T 1sq9_A 191 SVDISERG-LIATGFNN-------GTVQISEL--STLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS---F 257 (397)
T ss_dssp EEEECTTS-EEEEECTT-------SEEEEEET--TTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT---E
T ss_pred EEEECCCc-eEEEEeCC-------CcEEEEEC--CCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCC---C
Confidence 34443456 66777643 36889999 55543222 1100 0 111222333334566677665421 1
Q ss_pred CeEEEEECCCCcEEec-CCCC--c--------cCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 234 KSAEVYDVEADEWRML-PEMD--E--------ERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 234 ~~~~~yd~~t~~W~~~-~~~~--~--------~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
..+.+||..+.+-... .... . ......++++. ++++++.|+.+ ..+..||..+.+-
T Consensus 258 g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d--------g~i~iwd~~~~~~ 325 (397)
T 1sq9_A 258 GCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWD--------GKLRFWDVKTKER 325 (397)
T ss_dssp EEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETT--------SEEEEEETTTTEE
T ss_pred ceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCC--------CeEEEEEcCCCce
Confidence 5789999887643221 1100 0 11111233333 45666666643 2689999987753
No 169
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=74.87 E-value=59 Score=30.91 Aligned_cols=66 Identities=11% Similarity=0.054 Sum_probs=36.8
Q ss_pred CeEEEEEC--CC-CcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCC-CcccCcEEEEeCCCCceEEc
Q 013264 234 KSAEVYDV--EA-DEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQ-GRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 234 ~~~~~yd~--~t-~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~-~~~~~~v~~yd~~~~~W~~~ 300 (446)
..+.+||. .+ +++..+..+... ....++++..+.+++..+...... ....-.++.++.+++.|+..
T Consensus 330 ~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~~~~~ 399 (450)
T 2vdu_B 330 KCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNLNENSFVVN 399 (450)
T ss_dssp SEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEETTTTEEEEC
T ss_pred CeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEcCCCeEEEc
Confidence 57888887 33 455555444333 223566677778888766432110 00112566777888888633
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=74.70 E-value=20 Score=32.92 Aligned_cols=98 Identities=6% Similarity=0.003 Sum_probs=49.7
Q ss_pred eEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeEE--EEECCCCcEEecCCCCccCCcce
Q 013264 184 DVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSAE--VYDVEADEWRMLPEMDEERDECQ 260 (446)
Q Consensus 184 ~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~--~yd~~t~~W~~~~~~~~~r~~~~ 260 (446)
.++.+|+ .+.+.+.+... ....-..++.-.| ..||+.+..... ...+. .+|..+++.+.+...+.......
T Consensus 30 ~~~~~d~--~~g~~~~~~~~-~~~~p~~l~~spdg~~l~~~~~~~~~---~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~ 103 (361)
T 3scy_A 30 YTFRFNE--ETGESLPLSDA-EVANPSYLIPSADGKFVYSVNEFSKD---QAAVSAFAFDKEKGTLHLLNTQKTMGADPC 103 (361)
T ss_dssp EEEEEET--TTCCEEEEEEE-ECSCCCSEEECTTSSEEEEEECCSST---TCEEEEEEEETTTTEEEEEEEEECSSSCEE
T ss_pred EEEEEeC--CCCCEEEeecc-cCCCCceEEECCCCCEEEEEEccCCC---CCcEEEEEEeCCCCcEEEeeEeccCCCCcE
Confidence 3556677 77877776544 2222122333333 457777653211 13454 45555677776654432222213
Q ss_pred EEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 261 GVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 261 ~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.+++.++.||+....+ ..+.+||+.++
T Consensus 104 ~~~~dg~~l~~~~~~~--------~~v~~~~~~~~ 130 (361)
T 3scy_A 104 YLTTNGKNIVTANYSG--------GSITVFPIGQD 130 (361)
T ss_dssp EEEECSSEEEEEETTT--------TEEEEEEBCTT
T ss_pred EEEECCCEEEEEECCC--------CEEEEEEeCCC
Confidence 3444344577665321 36788887643
No 171
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=74.68 E-value=60 Score=30.87 Aligned_cols=114 Identities=15% Similarity=0.167 Sum_probs=58.9
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEE--ccCCccCcc-ceEEEEECC---cEEEEEeccCCCCCCC
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRR--VKPMSVARS-FFACAVVGA---STVCVAGGHDGQKNAL 233 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~--~~~~p~~r~-~~~~~~~~d---~~iyv~GG~~~~~~~~ 233 (446)
++..-++..++.|+.+ ..++.+|. .+..... +..+..... -.+++...+ +++++.|+.+
T Consensus 155 ~~~sp~~~~l~~~~~~-------g~v~~~~~--~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d------ 219 (450)
T 2vdu_B 155 ISIAEDDTTVIIADKF-------GDVYSIDI--NSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRD------ 219 (450)
T ss_dssp EEECTTSSEEEEEETT-------SEEEEEET--TSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETT------
T ss_pred EEEcCCCCEEEEEeCC-------CcEEEEec--CCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCC------
Confidence 3333456666666543 35788887 4443321 112221111 223334444 6677777653
Q ss_pred CeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 234 KSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 234 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
..+.+||..+.+-...- +........++++.++++++.|+.+ ..+..||..+++-
T Consensus 220 ~~i~vwd~~~~~~~~~~-~~~h~~~v~~~~~sd~~~l~s~~~d--------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 220 EHIKISHYPQCFIVDKW-LFGHKHFVSSICCGKDYLLLSAGGD--------DKIFAWDWKTGKN 274 (450)
T ss_dssp SCEEEEEESCTTCEEEE-CCCCSSCEEEEEECSTTEEEEEESS--------SEEEEEETTTCCE
T ss_pred CcEEEEECCCCceeeee-ecCCCCceEEEEECCCCEEEEEeCC--------CeEEEEECCCCcE
Confidence 46788998776533210 0001111123333366666777643 3789999988764
No 172
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=74.38 E-value=62 Score=30.91 Aligned_cols=192 Identities=8% Similarity=0.075 Sum_probs=97.0
Q ss_pred ECCCCcEEe--cCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeE--EEEeC-c--CCCCcEEEccCCccC-cc
Q 013264 137 NASNGTWER--IRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDV--YVLDM-V--NNSSRWRRVKPMSVA-RS 208 (446)
Q Consensus 137 dp~~~~W~~--l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v--~~~d~-~--~~t~~W~~~~~~p~~-r~ 208 (446)
-...+.|+. |+..+ ....-|+-+ .+++.-|++|=.+++.. -.++ ..|.. . ...-.-+++++--.+ .+
T Consensus 266 ~F~~spW~~t~L~~i~--~vTe~HSFa-~i~~~~fa~GyHnGDv~--PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~As 340 (670)
T 3ju4_A 266 SFHKSPWRKTDLGLIP--SVTEVHSFA-TIDNNGFAMGYHQGDVA--PREVGLFYFPDAFNSPSNYVRRQIPSEYEPDAS 340 (670)
T ss_dssp CSTTSCCEEEECCSCT--TCSEEEEEE-ECSSSCEEEEEEECSSS--SCEEEEEEETTTTTCTTCCEEEECCGGGCTTEE
T ss_pred eeccCCceeccccccc--ceeeeeeee-EecCCceEEEeccCCCC--cceeeEEEecccccCCcceeeeechhhhccccc
Confidence 345566765 44444 122234333 47788888886554421 2233 22211 0 012223444443222 23
Q ss_pred ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCC---CCc---
Q 013264 209 FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTES---QGR--- 282 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~---~~~--- 282 (446)
..++-.++ +++|++--.....+.-..+.+-+-.-..|+.+.-.........-.+..++.||+||...... .++
T Consensus 341 EPCvkyYd-gvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~nvHhtnlPFakvgD~l~mFgsERA~nEWE~G~pD~ 419 (670)
T 3ju4_A 341 EPCIKYYD-GVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHNVHHTTLPFAKVGDDLIMFGSERAENEWEAGAPDD 419 (670)
T ss_dssp EEEEEEET-TEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTCCCSSCCCEEEETTEEEEEEECSSTTCSSTTCCCC
T ss_pred cchhhhhC-CEEEEEecCcCCCCCcceeeeecccCCchhheeccccccccCCCcceeCCEEEEEeccccccccccCCCcc
Confidence 34555566 89999864433333446777777778899977422222221134567899999998752111 011
Q ss_pred -----ccCc-EEE-----EeCCCCceEEcccCC-CCCCCCCCCceEEEEecCCCcccEEE-EEcCCCCC
Q 013264 283 -----FKPD-AEC-----YDPKTGSWSKFDHVW-PFPSLSPRGSTATITSYRLQQHQWLW-FLGKEQQQ 338 (446)
Q Consensus 283 -----~~~~-v~~-----yd~~~~~W~~~~~~~-p~~~~~~r~~~~~~~~~~~~~~~~ly-v~GG~~~~ 338 (446)
+... +.. +..+.-+|..+...+ .+..-..-.+.+.+++.+ +.|| +|||.+.-
T Consensus 420 RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD----~~lyyiFGgEd~~ 484 (670)
T 3ju4_A 420 RYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKD----NYIYYMFGGEDHF 484 (670)
T ss_dssp CSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEET----TEEEEEEEEBCSC
T ss_pred cccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeC----CEEEEEecCcccC
Confidence 1111 122 223344677765321 222333445667777776 4664 78987653
No 173
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=74.04 E-value=22 Score=32.22 Aligned_cols=140 Identities=10% Similarity=0.085 Sum_probs=66.1
Q ss_pred eEEEEECCC-CcEE-ecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASN-GTWE-RIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~-~~W~-~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.+||..+ .+-. .+.... ....+.....++..++.|+.+ ..+.+||. .+.+-...-. .....
T Consensus 198 ~i~i~d~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~l~~~~~d-------~~i~v~d~--~~~~~~~~~~--~~~~~ 262 (369)
T 3zwl_B 198 KISKYDVSNNYEYVDSIDLHE----KSISDMQFSPDLTYFITSSRD-------TNSFLVDV--STLQVLKKYE--TDCPL 262 (369)
T ss_dssp EEEEEETTTTTEEEEEEECCS----SCEEEEEECTTSSEEEEEETT-------SEEEEEET--TTCCEEEEEE--CSSCE
T ss_pred EEEEEECCCCcEeEEEEecCC----CceeEEEECCCCCEEEEecCC-------ceEEEEEC--CCCceeeeec--CCCCc
Confidence 467888876 2322 222111 112233333466666776643 36889999 5554333211 12222
Q ss_pred eEEEEECCcEEEEEeccCCCCC--------CCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCC
Q 013264 210 FACAVVGASTVCVAGGHDGQKN--------ALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQ 280 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~--------~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~ 280 (446)
..++...+++..++|+.++... ....+.+||..+.+=... +........++++. ++++++.|+.++
T Consensus 263 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~--~~~~~~~v~~~~~s~~~~~l~s~~~dg--- 337 (369)
T 3zwl_B 263 NTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR--VQGHFGPLNTVAISPQGTSYASGGEDG--- 337 (369)
T ss_dssp EEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEE--EECCSSCEEEEEECTTSSEEEEEETTS---
T ss_pred eeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh--eecccCcEEEEEECCCCCEEEEEcCCC---
Confidence 2333333355555555433210 112678888876643221 11111111233333 556777776543
Q ss_pred CcccCcEEEEeCCCCc
Q 013264 281 GRFKPDAECYDPKTGS 296 (446)
Q Consensus 281 ~~~~~~v~~yd~~~~~ 296 (446)
.+..||.+++.
T Consensus 338 -----~v~iw~~~~~~ 348 (369)
T 3zwl_B 338 -----FIRLHHFEKSY 348 (369)
T ss_dssp -----EEEEEEECHHH
T ss_pred -----eEEEEECcccc
Confidence 67888877654
No 174
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=72.99 E-value=43 Score=31.60 Aligned_cols=18 Identities=17% Similarity=0.187 Sum_probs=14.3
Q ss_pred cceEEEEECCcEEEEEec
Q 013264 208 SFFACAVVGASTVCVAGG 225 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG 225 (446)
..|+++...+++||..|-
T Consensus 168 ~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCC
Confidence 457777777789999984
No 175
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=72.80 E-value=25 Score=31.81 Aligned_cols=105 Identities=12% Similarity=0.253 Sum_probs=56.6
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
+.+++.|+.++ .+.+||. .+........+....... +++...+++.++.|+.+ ..+.+||..+.
T Consensus 54 g~~l~~~~~dg-------~i~iw~~--~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d------g~v~iwd~~~~ 118 (368)
T 3mmy_A 54 GNFLIAGSWAN-------DVRCWEV--QDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCD------KTAKMWDLSSN 118 (368)
T ss_dssp SEEEEEEETTS-------EEEEEEE--CTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETT------SEEEEEETTTT
T ss_pred ceEEEEECCCC-------cEEEEEc--CCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCC------CcEEEEEcCCC
Confidence 47778877543 5888888 553322212222112222 23333345666666643 57899999988
Q ss_pred cEEecCCCCccCCcceEEEE---ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 245 EWRMLPEMDEERDECQGVCL---EGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 245 ~W~~~~~~~~~r~~~~~~~~---~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+-........+ ..++.+ .++.+++.|+.++ .+..||+.+++
T Consensus 119 ~~~~~~~~~~~---v~~~~~~~~~~~~~l~~~~~dg--------~i~vwd~~~~~ 162 (368)
T 3mmy_A 119 QAIQIAQHDAP---VKTIHWIKAPNYSCVMTGSWDK--------TLKFWDTRSSN 162 (368)
T ss_dssp EEEEEEECSSC---EEEEEEEECSSCEEEEEEETTS--------EEEEECSSCSS
T ss_pred CceeeccccCc---eEEEEEEeCCCCCEEEEccCCC--------cEEEEECCCCc
Confidence 76654322111 123333 2556667776532 57778776653
No 176
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=72.78 E-value=44 Score=29.80 Aligned_cols=105 Identities=10% Similarity=0.152 Sum_probs=54.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
-++.+++.|+.++ .+.+||. .+..-.. .+..... -.++....+++..+.|+.+ ..+.+||..
T Consensus 23 p~~~~l~s~~~dg-------~v~lWd~--~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~s~s~d------~~i~vwd~~ 85 (304)
T 2ynn_A 23 PTEPWVLTTLYSG-------RVELWNY--ETQVEVR--SIQVTETPVRAGKFIARKNWIIVGSDD------FRIRVFNYN 85 (304)
T ss_dssp SSSSEEEEEETTS-------EEEEEET--TTTEEEE--EEECCSSCEEEEEEEGGGTEEEEEETT------SEEEEEETT
T ss_pred CCCCEEEEEcCCC-------cEEEEEC--CCCceeE--EeeccCCcEEEEEEeCCCCEEEEECCC------CEEEEEECC
Confidence 4566666676543 5888888 5554322 1111111 1233333445666777643 578899988
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+++-... +........++++. ++.+.+.|+.++ .+..||.+++
T Consensus 86 ~~~~~~~--~~~h~~~v~~~~~~~~~~~l~sgs~D~--------~v~lWd~~~~ 129 (304)
T 2ynn_A 86 TGEKVVD--FEAHPDYIRSIAVHPTKPYVLSGSDDL--------TVKLWNWENN 129 (304)
T ss_dssp TCCEEEE--EECCSSCEEEEEECSSSSEEEEEETTS--------CEEEEEGGGT
T ss_pred CCcEEEE--EeCCCCcEEEEEEcCCCCEEEEECCCC--------eEEEEECCCC
Confidence 7653221 11111111233333 445666666543 6888888765
No 177
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=72.76 E-value=52 Score=29.31 Aligned_cols=167 Identities=14% Similarity=0.204 Sum_probs=78.5
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+++-... +.. ....-.+++...++.+++.|+.++ .+.+||. .+. +.....+........
T Consensus 78 ~i~vwd~~~~~~~~~--~~~-h~~~v~~~~~~~~~~~l~sgs~D~-------~v~lWd~--~~~-~~~~~~~~~h~~~v~ 144 (304)
T 2ynn_A 78 RIRVFNYNTGEKVVD--FEA-HPDYIRSIAVHPTKPYVLSGSDDL-------TVKLWNW--ENN-WALEQTFEGHEHFVM 144 (304)
T ss_dssp EEEEEETTTCCEEEE--EEC-CSSCEEEEEECSSSSEEEEEETTS-------CEEEEEG--GGT-TEEEEEECCCCSCEE
T ss_pred EEEEEECCCCcEEEE--EeC-CCCcEEEEEEcCCCCEEEEECCCC-------eEEEEEC--CCC-cchhhhhcccCCcEE
Confidence 467788776653221 111 112223344434566777777543 5788898 443 222111111112222
Q ss_pred EEEEC--CcEEEEEeccCCCCCCCCeEEEEECCCCc--EEecCCCCccCCcceEEEEE---CCEEEEEeCCCCCCCCccc
Q 013264 212 CAVVG--ASTVCVAGGHDGQKNALKSAEVYDVEADE--WRMLPEMDEERDECQGVCLE---GDRFFVVSGYGTESQGRFK 284 (446)
Q Consensus 212 ~~~~~--d~~iyv~GG~~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~r~~~~~~~~~---~~~lyv~GG~~~~~~~~~~ 284 (446)
++.+. ++.+++.|+.+ ..+.+||..+.. ...... ..+ ....+... ++.+.+.|+.+
T Consensus 145 ~v~~~p~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~--~~~-~v~~~~~~~~~~~~~l~s~s~D-------- 207 (304)
T 2ynn_A 145 CVAFNPKDPSTFASGCLD------RTVKVWSLGQSTPNFTLTTG--QER-GVNYVDYYPLPDKPYMITASDD-------- 207 (304)
T ss_dssp EEEECTTCTTEEEEEETT------SEEEEEETTCSSCSEEEECC--CTT-CEEEEEECCSTTCCEEEEEETT--------
T ss_pred EEEECCCCCCEEEEEeCC------CeEEEEECCCCCccceeccC--CcC-cEEEEEEEEcCCCCEEEEEcCC--------
Confidence 33332 35667777754 478889976542 111111 111 11122222 44566666643
Q ss_pred CcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 285 PDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 285 ~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
..+..||..+.+-...- .........+.+.. ++.+++.|+.++.
T Consensus 208 ~~i~iWd~~~~~~~~~~-------~~h~~~v~~~~~~p---~~~~l~s~s~Dg~ 251 (304)
T 2ynn_A 208 LTIKIWDYQTKSCVATL-------EGHMSNVSFAVFHP---TLPIIISGSEDGT 251 (304)
T ss_dssp SEEEEEETTTTEEEEEE-------ECCSSCEEEEEECS---SSSEEEEEETTSC
T ss_pred CeEEEEeCCCCccceee-------CCCCCCEEEEEECC---CCCEEEEEcCCCe
Confidence 36899999887532211 11122223333332 1467777877654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=72.45 E-value=51 Score=29.10 Aligned_cols=147 Identities=13% Similarity=0.082 Sum_probs=75.5
Q ss_pred eEEEEECCCCcEEecCCCCCCC-CccceEEEEeeCCEEEEE----eCcC------CCCCCccCeEEEEeCcCCCCcEEEc
Q 013264 132 GLTIFNASNGTWERIRPHVGRI-PMFCQCVAVPASRKLLLI----GGWD------PITLEPVPDVYVLDMVNNSSRWRRV 200 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~-p~~~~~~~~~~~~~lyv~----GG~~------~~~~~~~~~v~~~d~~~~t~~W~~~ 200 (446)
.+..||+.+++...+....... .......++.-++.||+. |... .........++.+|+ . .+...+
T Consensus 91 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~-g~~~~~ 167 (296)
T 3e5z_A 91 RLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAP--D-GTLSAP 167 (296)
T ss_dssp EEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECT--T-SCEEEE
T ss_pred eEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECC--C-CCEEEe
Confidence 5788898888877654321100 011123444467889986 4311 000111347999999 5 444443
Q ss_pred cCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC-CCcE-E--ecCCCCccCCcceEEEE-ECCEEEEEeCC
Q 013264 201 KPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE-ADEW-R--MLPEMDEERDECQGVCL-EGDRFFVVSGY 275 (446)
Q Consensus 201 ~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W-~--~~~~~~~~r~~~~~~~~-~~~~lyv~GG~ 275 (446)
..- .....+++.-.|+++++.... ...+++||.. +++. . .+-......- .++++ -+|.||+..+
T Consensus 168 ~~~--~~~~~gi~~s~dg~~lv~~~~------~~~i~~~~~~~~g~~~~~~~~~~~~~~~p--~~i~~d~~G~l~v~~~- 236 (296)
T 3e5z_A 168 IRD--RVKPNGLAFLPSGNLLVSDTG------DNATHRYCLNARGETEYQGVHFTVEPGKT--DGLRVDAGGLIWASAG- 236 (296)
T ss_dssp ECC--CSSEEEEEECTTSCEEEEETT------TTEEEEEEECSSSCEEEEEEEECCSSSCC--CSEEEBTTSCEEEEET-
T ss_pred ecC--CCCCccEEECCCCCEEEEeCC------CCeEEEEEECCCCcCcCCCeEeeCCCCCC--CeEEECCCCCEEEEcC-
Confidence 221 111133444445666644332 2578899986 4555 1 1111111111 23333 3678998761
Q ss_pred CCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 276 GTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 276 ~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+.|.+||++...-..+.
T Consensus 237 ---------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 237 ---------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp ---------TEEEEECTTSCEEEEEE
T ss_pred ---------CeEEEECCCCCEEEEEE
Confidence 26999999866555554
No 179
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=71.85 E-value=69 Score=30.36 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=64.7
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeE
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~ 236 (446)
+..++..++.||+.... ...+.++|+ .+..-..+.... ...+ .+...+ +.||+...... ..+
T Consensus 134 ~~la~d~~g~lyv~d~~-------~~~I~~id~--~~g~~~~~~~~~--~~~~-ia~~~~g~~l~~~d~~~~-----~~I 196 (409)
T 3hrp_A 134 WGIAAVGNNTVLAYQRD-------DPRVRLISV--DDNKVTTVHPGF--KGGK-PAVTKDKQRVYSIGWEGT-----HTV 196 (409)
T ss_dssp EEEEECSTTEEEEEETT-------TTEEEEEET--TTTEEEEEEETC--CBCB-CEECTTSSEEEEEBSSTT-----CEE
T ss_pred eEEEEeCCCCEEEEecC-------CCcEEEEEC--CCCEEEEeeccC--CCCc-eeEecCCCcEEEEecCCC-----ceE
Confidence 34455467889998652 346999999 666655543221 1122 333332 46777643211 278
Q ss_pred EEEECCCCc-EEecCCCCc-cCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 237 EVYDVEADE-WRMLPEMDE-ERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 237 ~~yd~~t~~-W~~~~~~~~-~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
+++|+.++. ...+..... .....+++++. ++.||+... ...+++||+.+..-..+
T Consensus 197 ~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~---------~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 197 YVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDS---------NKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp EEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECT---------TCEEEEEETTTCCEEEE
T ss_pred EEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEEC---------CCcEEEEECCCCCEEEE
Confidence 999987543 233311111 11111344444 579999422 23699999998876555
No 180
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=71.77 E-value=45 Score=28.19 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=59.7
Q ss_pred ceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcE-EEccC--CccC--ccceEEEEECCcEEEEEeccCCCC
Q 013264 157 CQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRW-RRVKP--MSVA--RSFFACAVVGASTVCVAGGHDGQK 230 (446)
Q Consensus 157 ~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W-~~~~~--~p~~--r~~~~~~~~~d~~iyv~GG~~~~~ 230 (446)
-.++... .++++|+|-|. .+|+|+. .+..- +.+.. +|.. ....+.. ..++++|++-|
T Consensus 55 IDAa~~~~~~~~~yfFkG~---------~yw~~~~--~~~~~Pk~i~~~G~p~~~~~iDAA~~-~~~g~~yfFkg----- 117 (195)
T 1itv_A 55 LDSVFEEPLSKKLFFFSGR---------QVWVYTG--ASVLGPRRLDKLGLGADVAQVTGALR-SGRGKMLLFSG----- 117 (195)
T ss_dssp CSEEEECTTTCCEEEEETT---------EEEEEET--TEEEEEEEGGGGTCCTTCCCCCEEEE-CSTTEEEEEET-----
T ss_pred ccEEEEECCCCeEEEEeCC---------EEEEEcC--CccCCCEEeeecccCCCccceeEEEE-cCCCeEEEEeC-----
Confidence 3444432 26889999762 4778876 32110 11211 2211 2222322 33489999976
Q ss_pred CCCCeEEEEECCCCcEEe-----c----CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 231 NALKSAEVYDVEADEWRM-----L----PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 231 ~~~~~~~~yd~~t~~W~~-----~----~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+..+.||..+++=.. + +.+|.. ..++...++.+|++-|. ..+.||..+.+
T Consensus 118 ---~~ywr~d~~~~~~~~gyPr~i~~~w~Gvp~~---idaa~~~~g~~Yffkg~----------~y~~~~~~~~~ 176 (195)
T 1itv_A 118 ---RRLWRFDVKAQMVDPRSASEVDRMFPGVPLD---THDVFQFREKAYFCQDR----------FYWRVSSRSEL 176 (195)
T ss_dssp ---TEEEEEETTTTEECGGGCEEHHHHSTTSCSS---CSEEEEETTEEEEEETT----------EEEEEECCTTC
T ss_pred ---CEEEEEeCCcccccCCCccChhhcCCCCCCC---CCEEEEeCCeEEEEeCC----------EEEEEECCccE
Confidence 467999987753211 1 122221 23555567999999873 57888887765
No 181
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=71.68 E-value=65 Score=29.98 Aligned_cols=97 Identities=14% Similarity=0.117 Sum_probs=50.9
Q ss_pred CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 216 GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 216 ~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
.|++.++.|+.+ ..+.+||..+.+-...-.-. .....++++. ++...+.|+.+ ..+..||+.+
T Consensus 133 ~dg~~l~s~~~d------~~i~iwd~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~s~s~d--------~~v~iwd~~~ 196 (393)
T 1erj_A 133 PDGKFLATGAED------RLIRIWDIENRKIVMILQGH--EQDIYSLDYFPSGDKLVSGSGD--------RTVRIWDLRT 196 (393)
T ss_dssp TTSSEEEEEETT------SCEEEEETTTTEEEEEECCC--SSCEEEEEECTTSSEEEEEETT--------SEEEEEETTT
T ss_pred CCCCEEEEEcCC------CeEEEEECCCCcEEEEEccC--CCCEEEEEEcCCCCEEEEecCC--------CcEEEEECCC
Confidence 346777777653 47889999887644321111 1111233333 44555666543 3689999988
Q ss_pred CceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 295 GSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 295 ~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
++-...-. ........+.... ++++++.|+.++.
T Consensus 197 ~~~~~~~~-------~~~~v~~~~~~~~---~~~~l~~~s~d~~ 230 (393)
T 1erj_A 197 GQCSLTLS-------IEDGVTTVAVSPG---DGKYIAAGSLDRA 230 (393)
T ss_dssp TEEEEEEE-------CSSCEEEEEECST---TCCEEEEEETTSC
T ss_pred CeeEEEEE-------cCCCcEEEEEECC---CCCEEEEEcCCCc
Confidence 86543321 1111222233221 1477788877654
No 182
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=71.56 E-value=54 Score=28.96 Aligned_cols=139 Identities=6% Similarity=-0.018 Sum_probs=75.6
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC---cc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA---RS 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~---r~ 208 (446)
.+..||+.++ ...+.... ....+.+...++.||+.... ...+.+||+ .+.+.+.+...... ..
T Consensus 51 ~i~~~~~~~~-~~~~~~~~----~~~~~l~~~~dg~l~v~~~~-------~~~i~~~d~--~~g~~~~~~~~~~~~~~~~ 116 (296)
T 3e5z_A 51 RTWAWSDDGQ-LSPEMHPS----HHQNGHCLNKQGHLIACSHG-------LRRLERQRE--PGGEWESIADSFEGKKLNS 116 (296)
T ss_dssp EEEEEETTSC-EEEEESSC----SSEEEEEECTTCCEEEEETT-------TTEEEEECS--TTCCEEEEECEETTEECCC
T ss_pred EEEEEECCCC-eEEEECCC----CCcceeeECCCCcEEEEecC-------CCeEEEEcC--CCCcEEEEeeccCCCCCCC
Confidence 5788999887 55544322 12234444457888877532 246999999 77887765332111 11
Q ss_pred ceEEEEECCcEEEEE----eccC------C-CCCCCCeEEEEECCCCcEEecC-CCCccCCcceEEEEE-CCEEEEEeCC
Q 013264 209 FFACAVVGASTVCVA----GGHD------G-QKNALKSAEVYDVEADEWRMLP-EMDEERDECQGVCLE-GDRFFVVSGY 275 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~----GG~~------~-~~~~~~~~~~yd~~t~~W~~~~-~~~~~r~~~~~~~~~-~~~lyv~GG~ 275 (446)
...+++-.+++||+. |... . .......++.||+. ++-+.+. .+..+ .++++. ++++++....
T Consensus 117 ~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~----~gi~~s~dg~~lv~~~~ 191 (296)
T 3e5z_A 117 PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKP----NGLAFLPSGNLLVSDTG 191 (296)
T ss_dssp CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSE----EEEEECTTSCEEEEETT
T ss_pred CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCC----ccEEECCCCCEEEEeCC
Confidence 123444445889986 4321 0 01112578999987 5554442 21111 234443 4555554432
Q ss_pred CCCCCCcccCcEEEEeCC-CCce
Q 013264 276 GTESQGRFKPDAECYDPK-TGSW 297 (446)
Q Consensus 276 ~~~~~~~~~~~v~~yd~~-~~~W 297 (446)
...+++||+. +++.
T Consensus 192 --------~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 192 --------DNATHRYCLNARGET 206 (296)
T ss_dssp --------TTEEEEEEECSSSCE
T ss_pred --------CCeEEEEEECCCCcC
Confidence 2378999986 5555
No 183
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=70.87 E-value=89 Score=31.23 Aligned_cols=116 Identities=13% Similarity=0.093 Sum_probs=62.2
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEE-ccC--C---ccCccceEEEEECCcEEEEEeccCCCCC
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRR-VKP--M---SVARSFFACAVVGASTVCVAGGHDGQKN 231 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~-~~~--~---p~~r~~~~~~~~~d~~iyv~GG~~~~~~ 231 (446)
.+++..-++.+++.|+.++ .+.+||. .+.+-.. +.. + .....-.+++...|++..+.|+.+
T Consensus 194 ~~v~fspdg~~las~s~D~-------~i~lwd~--~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D---- 260 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDG-------TIVLYNG--VDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASAD---- 260 (611)
T ss_dssp EEEEECTTSSEEEEEETTS-------CEEEEET--TTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETT----
T ss_pred EEEEECCCCCEEEEEECCC-------cEEEEEC--CCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCC----
Confidence 3444445677888887653 5888998 5555432 211 0 111112233333356777777653
Q ss_pred CCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 232 ALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 232 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
..+.++|..+.+....-............+..++..++.++.++ .+..||+.+.+
T Consensus 261 --~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~--------~i~~~~~~~~~ 315 (611)
T 1nr0_A 261 --KTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANG--------FINFVNPELGS 315 (611)
T ss_dssp --SEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTC--------CEEEEETTTTE
T ss_pred --CeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCC--------cEEEEeCCCCC
Confidence 57889999888765432222111111222333555556665432 57888888765
No 184
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=70.72 E-value=51 Score=30.97 Aligned_cols=141 Identities=9% Similarity=0.074 Sum_probs=70.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceE
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFA 211 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~ 211 (446)
.+.+||..+.+-...-..+. ......+.+..-++.+++.|+.++ .+.+||. .+.+....-.......-.+
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~-h~~~v~~~~~s~~~~~l~s~~~dg-------~i~iwd~--~~~~~~~~~~~~~~~~v~~ 262 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSP-RHGAVSSICIDEECCVLILGTTRG-------IIDIWDI--RFNVLIRSWSFGDHAPITH 262 (437)
T ss_dssp EEEEEETTTCCEEEEEECCG-GGCCEEEEEECTTSCEEEEEETTS-------CEEEEET--TTTEEEEEEBCTTCEEEEE
T ss_pred eEEEEeCCCCeeeEEEccCC-CCCceEEEEECCCCCEEEEEcCCC-------eEEEEEc--CCccEEEEEecCCCCceEE
Confidence 56778887765432211110 011122333334677777777543 5889999 6554332211111111111
Q ss_pred EEEE----CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEec-C-C---C------Cc-------------cCCcceEEE
Q 013264 212 CAVV----GASTVCVAGGHDGQKNALKSAEVYDVEADEWRML-P-E---M------DE-------------ERDECQGVC 263 (446)
Q Consensus 212 ~~~~----~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~-~-~---~------~~-------------~r~~~~~~~ 263 (446)
++.. .++++++.|+.+ ..+.+||..+.+-... . . . |. ......+++
T Consensus 263 ~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~ 336 (437)
T 3gre_A 263 VEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTIS 336 (437)
T ss_dssp EEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEE
T ss_pred EEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEE
Confidence 1111 234565665543 4688899877653211 0 0 0 00 000113445
Q ss_pred EECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 264 LEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 264 ~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+.++.+++.||.++ .+..||+.+.+
T Consensus 337 ~~~~~~l~s~~~d~--------~i~~wd~~~~~ 361 (437)
T 3gre_A 337 VSNDKILLTDEATS--------SIVMFSLNELS 361 (437)
T ss_dssp EETTEEEEEEGGGT--------EEEEEETTCGG
T ss_pred ECCceEEEecCCCC--------eEEEEECCCcc
Confidence 55788888888543 79999998875
No 185
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=70.65 E-value=59 Score=29.04 Aligned_cols=143 Identities=13% Similarity=0.100 Sum_probs=74.4
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-c--c
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-R--S 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-r--~ 208 (446)
.+..||+ +.+...+.... ....+.+...+++||+.... ...+.+||+ . .+.+.+...... + .
T Consensus 68 ~i~~~~~-~g~~~~~~~~~----~~~~gl~~d~dG~l~v~~~~-------~~~v~~~~~--~-g~~~~~~~~~~~~~~~~ 132 (305)
T 3dr2_A 68 RVLGWRE-DGTVDVLLDAT----AFTNGNAVDAQQRLVHCEHG-------RRAITRSDA--D-GQAHLLVGRYAGKRLNS 132 (305)
T ss_dssp EEEEEET-TSCEEEEEESC----SCEEEEEECTTSCEEEEETT-------TTEEEEECT--T-SCEEEEECEETTEECSC
T ss_pred EEEEEeC-CCCEEEEeCCC----CccceeeECCCCCEEEEECC-------CCEEEEECC--C-CCEEEEEeccCCCccCC
Confidence 4667777 34443332211 11234444457788876421 236889998 5 555555322111 1 1
Q ss_pred ceEEEEECCcEEEEE----eccCC-------CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCC
Q 013264 209 FFACAVVGASTVCVA----GGHDG-------QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGY 275 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~----GG~~~-------~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~ 275 (446)
-..+++-.+++||+. |-... .......+++||+.+++.+.+. .... ..++++. ++ .||+....
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~--p~gl~~spdg~~lyv~~~~ 208 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDH--PNGLAFSPDEQTLYVSQTP 208 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESS--EEEEEECTTSSEEEEEECC
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCC--CcceEEcCCCCEEEEEecC
Confidence 123444445889985 32210 0011357899999888887764 2111 1344444 33 68887542
Q ss_pred CCCCCCcccCcEEEEeCCCCc
Q 013264 276 GTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 276 ~~~~~~~~~~~v~~yd~~~~~ 296 (446)
... ...+.+++||+..+.
T Consensus 209 ~~~---~~~~~i~~~~~~~~~ 226 (305)
T 3dr2_A 209 EQG---HGSVEITAFAWRDGA 226 (305)
T ss_dssp C------CCCEEEEEEEETTE
T ss_pred CcC---CCCCEEEEEEecCCC
Confidence 110 012479999987664
No 186
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=70.54 E-value=23 Score=30.92 Aligned_cols=61 Identities=7% Similarity=0.018 Sum_probs=36.7
Q ss_pred CcEEEEEeccCCCCCCCCeEEEEECCCCcEEe-----cC-CCCccC-----CcceEEEE--ECCEEEEEeCCCCCCCCcc
Q 013264 217 ASTVCVAGGHDGQKNALKSAEVYDVEADEWRM-----LP-EMDEER-----DECQGVCL--EGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 217 d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~-----~~-~~~~~r-----~~~~~~~~--~~~~lyv~GG~~~~~~~~~ 283 (446)
++++|++-| +..++||..+++=.. +. .+|... ....++.. .++++|+|-|.
T Consensus 129 ~~k~yfFkG--------~~yw~~d~~~~~~~~gyPk~i~~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg~-------- 192 (227)
T 3lp9_A 129 GKEVYLFKG--------DQYARIDYGSNSMVNKEIKSISSGYPCFRNTIFESGADAAFASHKTNEVYFFKDD-------- 192 (227)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEESSSSCEEHHHHCGGGTTSGGGGCCSEEEECSSTTEEEEEETT--------
T ss_pred CCEEEEEEC--------CEEEEEeCCCccccCCCCeEHHHCCCCccccccCCCccEEEEcCCCceEEEEECC--------
Confidence 489999977 578999987653211 00 122110 11123333 35899999773
Q ss_pred cCcEEEEeCCCC
Q 013264 284 KPDAECYDPKTG 295 (446)
Q Consensus 284 ~~~v~~yd~~~~ 295 (446)
.-+.||..++
T Consensus 193 --~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 --HYARVKVTPX 202 (227)
T ss_dssp --EEEEEECCSS
T ss_pred --EEEEEECCcc
Confidence 5788998776
No 187
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=70.32 E-value=49 Score=28.00 Aligned_cols=111 Identities=12% Similarity=0.136 Sum_probs=60.0
Q ss_pred CccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc--E-EEcc----CCccCccceEEEEECCcEEEEEecc
Q 013264 154 PMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR--W-RRVK----PMSVARSFFACAVVGASTVCVAGGH 226 (446)
Q Consensus 154 p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~--W-~~~~----~~p~~r~~~~~~~~~d~~iyv~GG~ 226 (446)
|..-.++....++++|+|-| +.+|+||. .+.. . +.+. .+|......+.....++++|.+-|
T Consensus 50 P~~iDAa~~~~~g~~yfFkg---------~~yw~~~~--~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG- 117 (196)
T 3c7x_A 50 PASINTAYERKDGKFVFFKG---------DKHWVFDE--ASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG- 117 (196)
T ss_dssp CSSCCEEEECTTSCEEEEET---------TEEEEEET--TEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-
T ss_pred CCCccEEEEeCCCcEEEecC---------CEEEEEeC--CcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-
Confidence 33334444335788999965 25788876 2211 0 1222 233222232222222489999976
Q ss_pred CCCCCCCCeEEEEECCCCcEEe-----c---CCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 227 DGQKNALKSAEVYDVEADEWRM-----L---PEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 227 ~~~~~~~~~~~~yd~~t~~W~~-----~---~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+..++||..+++=.. + +.+|... .++... ++ ++|++-|. ..+.||..+.+
T Consensus 118 -------~~yw~yd~~~~~v~~gyPk~i~~~~gip~~i---daAf~~~~~~~~YfFkg~----------~y~r~d~~~~~ 177 (196)
T 3c7x_A 118 -------NKYYRFNEELRAVDSEYPKNIKVWEGIPESP---RGSFMGSDEVFTYFYKGN----------KYWKFNNQKLK 177 (196)
T ss_dssp -------TEEEEEETTTTEECTTCSEEGGGSBTCCSSC---SEEEECTTSSEEEEEETT----------EEEEEETTTTE
T ss_pred -------CEEEEEeCCcccccCCCCccHHHCCCcCCCc---ceeEEecCCCEEEEEECC----------EEEEEECCcce
Confidence 467899987753221 1 1222211 233333 44 99999773 57899988764
No 188
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=70.31 E-value=30 Score=30.08 Aligned_cols=64 Identities=14% Similarity=0.219 Sum_probs=36.7
Q ss_pred CcEEEEEeccCCCCCCCCeEEEEECCCC----cEEe--------cCCCCcc--CCcceEEEE--ECCEEEEEeCCCCCCC
Q 013264 217 ASTVCVAGGHDGQKNALKSAEVYDVEAD----EWRM--------LPEMDEE--RDECQGVCL--EGDRFFVVSGYGTESQ 280 (446)
Q Consensus 217 d~~iyv~GG~~~~~~~~~~~~~yd~~t~----~W~~--------~~~~~~~--r~~~~~~~~--~~~~lyv~GG~~~~~~ 280 (446)
++++|++-| +.+++||..++ .-.. .+.+|.. ....-++.. .++++|+|-|.
T Consensus 70 ~g~~~fFkg--------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~IDAA~~~~~~gk~yfFkG~----- 136 (225)
T 3oyo_A 70 ASEAYVFSG--------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSIDSAFRSTKGKEVYLFKGN----- 136 (225)
T ss_dssp TTEEEEEET--------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCCEEEECSSTTEEEEEETT-----
T ss_pred CCeEEEEcC--------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccceEEEECCCCcEEEEeCC-----
Confidence 489999976 46788876332 2211 1223321 001123333 36899999873
Q ss_pred CcccCcEEEEeCCCCceE
Q 013264 281 GRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 281 ~~~~~~v~~yd~~~~~W~ 298 (446)
..++||..+++-.
T Consensus 137 -----~yw~~d~~~~~~~ 149 (225)
T 3oyo_A 137 -----KYVRIAYDSKQLV 149 (225)
T ss_dssp -----EEEEEETTTTEEE
T ss_pred -----eEEEEECCCCeec
Confidence 5789998776554
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=69.93 E-value=59 Score=28.82 Aligned_cols=164 Identities=10% Similarity=0.033 Sum_probs=84.5
Q ss_pred eEEEEECCCCc--EEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 132 GLTIFNASNGT--WERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~--W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
.+.++|+.+.+ |+.-..- ....+.+.+..++.+++.+ .+.++.||+ +.+..|+.-.+ .....
T Consensus 16 ~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilvs~---------~~~V~~~d~-~G~~~W~~~~~--~~~~~ 79 (276)
T 3no2_A 16 KIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILFSY---------SKGAKMITR-DGRELWNIAAP--AGCEM 79 (276)
T ss_dssp EEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEEEC---------BSEEEEECT-TSCEEEEEECC--TTCEE
T ss_pred EEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEEeC---------CCCEEEECC-CCCEEEEEcCC--CCccc
Confidence 47788987764 6643321 0123555565688888832 235899999 23445765442 11123
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC-cEEec--CCCCccC-CcceEEEEECCEEEEEeCCCCCCCCcccC
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD-EWRML--PEMDEER-DECQGVCLEGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~--~~~~~~r-~~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 285 (446)
+++....|+++++..... ...+..+|+..+ .|+.- ....... .........++.+++.... ..
T Consensus 80 ~~~~~~~dG~~lv~~~~~-----~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~--------~~ 146 (276)
T 3no2_A 80 QTARILPDGNALVAWCGH-----PSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA--------TS 146 (276)
T ss_dssp EEEEECTTSCEEEEEEST-----TEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT--------TT
T ss_pred cccEECCCCCEEEEecCC-----CCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC--------CC
Confidence 445555567777764421 146778887443 24432 1111110 0101223446666665432 23
Q ss_pred cEEEEeCCCC-ceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 286 DAECYDPKTG-SWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 286 ~v~~yd~~~~-~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
.+.+||++-+ .|+.-.. ...++++...+ +.++|.+...+
T Consensus 147 ~v~~~d~~G~~~w~~~~~---------~~~~~~~~~~~----g~~~v~~~~~~ 186 (276)
T 3no2_A 147 EVREIAPNGQLLNSVKLS---------GTPFSSAFLDN----GDCLVACGDAH 186 (276)
T ss_dssp EEEEECTTSCEEEEEECS---------SCCCEEEECTT----SCEEEECBTTS
T ss_pred EEEEECCCCCEEEEEECC---------CCccceeEcCC----CCEEEEeCCCC
Confidence 7999999732 3654331 01123344433 47777766544
No 190
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=69.74 E-value=56 Score=28.44 Aligned_cols=138 Identities=12% Similarity=0.110 Sum_probs=72.9
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+..||+....-..+.... . ...+..++. .++.||+.-.. .+.+.++|+ ....-+.+..... ..-.
T Consensus 59 ~I~~~~~~g~~~~~~~~~~--~-~~p~~ia~d~~~~~lyv~d~~-------~~~I~~~~~--~g~~~~~~~~~~~-~~P~ 125 (267)
T 1npe_A 59 SIGRASLHGGEPTTIIRQD--L-GSPEGIALDHLGRTIFWTDSQ-------LDRIEVAKM--DGTQRRVLFDTGL-VNPR 125 (267)
T ss_dssp EEEEEESSSCCCEEEECTT--C-CCEEEEEEETTTTEEEEEETT-------TTEEEEEET--TSCSCEEEECSSC-SSEE
T ss_pred EEEEEecCCCCcEEEEECC--C-CCccEEEEEecCCeEEEEECC-------CCEEEEEEc--CCCCEEEEEECCC-CCcc
Confidence 5677887665433222111 1 122444443 26899998542 357899998 5443333321111 1123
Q ss_pred EEEEEC-CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVG-ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~-d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.+++-. +++||+..... ....++++++....-+.+..... ....++++. ++.||+.-.. .+.+
T Consensus 126 ~i~vd~~~g~lyv~~~~~----~~~~I~~~~~dg~~~~~~~~~~~--~~P~gia~d~~~~~lyv~d~~--------~~~I 191 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNR----DNPKIETSHMDGTNRRILAQDNL--GLPNGLTFDAFSSQLCWVDAG--------THRA 191 (267)
T ss_dssp EEEEETTTTEEEEEECCS----SSCEEEEEETTSCCCEEEECTTC--SCEEEEEEETTTTEEEEEETT--------TTEE
T ss_pred EEEEeeCCCEEEEEECCC----CCcEEEEEecCCCCcEEEEECCC--CCCcEEEEcCCCCEEEEEECC--------CCEE
Confidence 344442 38999985321 12578889886544333321111 112445554 5699998542 3479
Q ss_pred EEEeCCCCc
Q 013264 288 ECYDPKTGS 296 (446)
Q Consensus 288 ~~yd~~~~~ 296 (446)
.+||+....
T Consensus 192 ~~~~~~g~~ 200 (267)
T 1npe_A 192 ECLNPAQPG 200 (267)
T ss_dssp EEEETTEEE
T ss_pred EEEecCCCc
Confidence 999997643
No 191
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=69.62 E-value=81 Score=32.59 Aligned_cols=128 Identities=10% Similarity=0.072 Sum_probs=69.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCC--ccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc--CCccCc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIP--MFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK--PMSVAR 207 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p--~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~--~~p~~r 207 (446)
.+..||+.++++..+..-. .. ....+.....++.|++-. . .-+.+||| .+++++... .++. .
T Consensus 494 Gl~~~d~~~~~~~~~~~~~--~~~~~~~~~i~~d~~g~lWigt-~--------~Gl~~~~~--~~~~~~~~~~~gl~~-~ 559 (758)
T 3ott_A 494 GIDKINPRTREVTKLFADE--LTGEKSPNYLLCDEDGLLWVGF-H--------GGVMRINP--KDESQQSISFGSFSN-N 559 (758)
T ss_dssp SEEEEETTTTEEEEECTTT--SCGGGCEEEEEECTTSCEEEEE-T--------TEEEEECC----CCCCBCCCCC----C
T ss_pred CcEEEeCCCCceEEecCCC--cCCCcccceEEECCCCCEEEEe-c--------CceEEEec--CCCceEEecccCCCc-c
Confidence 4678999999888764321 11 122334444567888643 1 23889999 777776553 2332 1
Q ss_pred cceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCc
Q 013264 208 SFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
.-.++..- ++.|++... +-+.+||+.+.+..... ++..... .++.. .+|.||+ ||. +.
T Consensus 560 ~i~~i~~~-~g~lWi~t~--------~Gl~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~G~l~f-G~~---------~G 618 (758)
T 3ott_A 560 EILSMTCV-KNSIWVSTT--------NGLWIIDRKTMDARQQN-MTNKRFT-SLLFDPKEDCVYL-GGA---------DG 618 (758)
T ss_dssp CEEEEEEE-TTEEEEEES--------SCEEEEETTTCCEEEC---CCCCCS-EEEEETTTTEEEE-ECB---------SE
T ss_pred ceEEEEEC-CCCEEEECC--------CCeEEEcCCCceeEEec-CCCCcee-eeEEECCCCcEEE-ecC---------Cc
Confidence 22333333 488887642 34689999998876542 2222222 22222 2667765 553 35
Q ss_pred EEEEeCCC
Q 013264 287 AECYDPKT 294 (446)
Q Consensus 287 v~~yd~~~ 294 (446)
+..|||+.
T Consensus 619 l~~f~p~~ 626 (758)
T 3ott_A 619 FGISHSNL 626 (758)
T ss_dssp EEEEEC--
T ss_pred eEEEChhh
Confidence 88999964
No 192
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=69.55 E-value=33 Score=31.64 Aligned_cols=106 Identities=19% Similarity=0.236 Sum_probs=55.4
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccC----------C-ccCccceEEEEE-C-CcEEEEEeccCCCCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKP----------M-SVARSFFACAVV-G-ASTVCVAGGHDGQKN 231 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~----------~-p~~r~~~~~~~~-~-d~~iyv~GG~~~~~~ 231 (446)
++.+++.|+.++ .+.+||. .+........ . .........+.+ . ++.+++.|+.+
T Consensus 55 ~~~~l~~~~~dg-------~i~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d---- 121 (408)
T 4a11_B 55 EGRYMLSGGSDG-------VIVLYDL--ENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFD---- 121 (408)
T ss_dssp TCCEEEEEETTS-------CEEEEEC--CCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETT----
T ss_pred CCCEEEEEcCCC-------eEEEEEC--CCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCC----
Confidence 567777777543 4788888 4443221110 0 011122222232 2 34566666643
Q ss_pred CCCeEEEEECCCCcEEecCCCCccCCcceEEEEE----CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 232 ALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE----GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 232 ~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
..+.+||..+.+-...-..+... ..+... ++.+++.|+.+ ..+..||+.+.+
T Consensus 122 --~~i~iwd~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--------~~v~~~d~~~~~ 177 (408)
T 4a11_B 122 --KTLKVWDTNTLQTADVFNFEETV---YSHHMSPVSTKHCLVAVGTRG--------PKVQLCDLKSGS 177 (408)
T ss_dssp --SEEEEEETTTTEEEEEEECSSCE---EEEEECSSCSSCCEEEEEESS--------SSEEEEESSSSC
T ss_pred --CeEEEeeCCCCccceeccCCCce---eeeEeecCCCCCcEEEEEcCC--------CeEEEEeCCCcc
Confidence 57889999887655443322221 122222 33466666643 268999998764
No 193
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=69.47 E-value=40 Score=30.31 Aligned_cols=108 Identities=11% Similarity=0.207 Sum_probs=54.0
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC---cEEEEEeccCCCCCCCCeEEEEECC
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA---STVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d---~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
..+++.|+.+.. ...+.+||. .+.+............-.+++...+ +.+++.|+.+ ..+.+||..
T Consensus 31 ~~l~~~~s~~~~----d~~v~iw~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d------g~i~iwd~~ 98 (357)
T 3i2n_A 31 AKFVTMGNFARG----TGVIQLYEI--QHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG------GNLHIWNLE 98 (357)
T ss_dssp SEEEEEEC--CC----CEEEEEEEE--CSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT------SCEEEECTT
T ss_pred ceEEEecCccCC----CcEEEEEeC--CCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC------CeEEEEeCC
Confidence 356666654210 236888998 6666554433222222223333222 3666666643 467889887
Q ss_pred CCc--EEecCCCCccCCcceEEEE-------ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 243 ADE--WRMLPEMDEERDECQGVCL-------EGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 243 t~~--W~~~~~~~~~r~~~~~~~~-------~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+.+ -..+.. ......++.. .++.+++.|+.++ .+..||+.+..
T Consensus 99 ~~~~~~~~~~~---~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~--------~i~vwd~~~~~ 150 (357)
T 3i2n_A 99 APEMPVYSVKG---HKEIINAIDGIGGLGIGEGAPEIVTGSRDG--------TVKVWDPRQKD 150 (357)
T ss_dssp SCSSCSEEECC---CSSCEEEEEEESGGGCC-CCCEEEEEETTS--------CEEEECTTSCS
T ss_pred CCCccEEEEEe---cccceEEEeeccccccCCCccEEEEEeCCC--------eEEEEeCCCCC
Confidence 764 111111 1111112222 2455666666432 68899998764
No 194
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=69.16 E-value=62 Score=28.71 Aligned_cols=108 Identities=15% Similarity=0.073 Sum_probs=53.3
Q ss_pred CeEEEEeCcCCCCcEEEccCCccCc-cceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCcc----C
Q 013264 183 PDVYVLDMVNNSSRWRRVKPMSVAR-SFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEE----R 256 (446)
Q Consensus 183 ~~v~~~d~~~~t~~W~~~~~~p~~r-~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----r 256 (446)
..+.++|+ .+.+-...-.++... ....++.-.|+ .+|+.+.. ...+.+||..+.+-...-..+.. .
T Consensus 11 ~~v~~~d~--~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~------~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 82 (337)
T 1pby_B 11 DKLVVIDT--EKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNK------SESLVKIDLVTGETLGRIDLSTPEERVK 82 (337)
T ss_dssp TEEEEEET--TTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETT------TTEEEEEETTTCCEEEEEECCBTTEEEE
T ss_pred CeEEEEEC--CCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCC------CCeEEEEECCCCCeEeeEEcCCcccccc
Confidence 46888998 665543322222210 12233333334 78877643 25789999988765432111110 0
Q ss_pred CcceEEEEE--CCEEEEEeCCCCCCCCc---ccCcEEEEeCCCCceEE
Q 013264 257 DECQGVCLE--GDRFFVVSGYGTESQGR---FKPDAECYDPKTGSWSK 299 (446)
Q Consensus 257 ~~~~~~~~~--~~~lyv~GG~~~~~~~~---~~~~v~~yd~~~~~W~~ 299 (446)
.- ..+++. +..||+........... ....+.+||+.+.+...
T Consensus 83 ~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~ 129 (337)
T 1pby_B 83 SL-FGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK 129 (337)
T ss_dssp CT-TCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE
T ss_pred cc-cceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEE
Confidence 11 233333 33777764210000000 12579999998876543
No 195
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=69.03 E-value=66 Score=28.97 Aligned_cols=142 Identities=10% Similarity=0.036 Sum_probs=76.4
Q ss_pred eeEEEEECCCCcEEecCCCCCC----------------CCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCC
Q 013264 131 YGLTIFNASNGTWERIRPHVGR----------------IPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNN 193 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~----------------~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~ 193 (446)
..+..||+..+++......... .....++.++.. ++.|||.... ..+.++|+ .
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~--------~~i~~~d~--~ 109 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY--------YHLSVVGS--E 109 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT--------TEEEEECT--T
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC--------CCEEEEeC--C
Confidence 3577889888777654321100 001123444432 6899997431 24888999 6
Q ss_pred CCcEEEccCCccC---ccceEEEEEC-CcEEEEEeccCCC-----------CCCCCeEEEEECCCCcEEecC-CCCccCC
Q 013264 194 SSRWRRVKPMSVA---RSFFACAVVG-ASTVCVAGGHDGQ-----------KNALKSAEVYDVEADEWRMLP-EMDEERD 257 (446)
Q Consensus 194 t~~W~~~~~~p~~---r~~~~~~~~~-d~~iyv~GG~~~~-----------~~~~~~~~~yd~~t~~W~~~~-~~~~~r~ 257 (446)
+...+.+...... .....+++-. ++.||+.-..... ......+++||+.+.+.+.+. .+..+
T Consensus 110 ~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p-- 187 (322)
T 2fp8_A 110 GGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVP-- 187 (322)
T ss_dssp CEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCC--
T ss_pred CCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccC--
Confidence 5555554322111 1123344444 5789987432110 012257899999888765442 11111
Q ss_pred cceEEEEE-C-CEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 258 ECQGVCLE-G-DRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 258 ~~~~~~~~-~-~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
.++++. + +.|||.-.. .+.|.+||+..
T Consensus 188 --~gia~~~dg~~lyv~d~~--------~~~I~~~~~~~ 216 (322)
T 2fp8_A 188 --GGAEVSADSSFVLVAEFL--------SHQIVKYWLEG 216 (322)
T ss_dssp --CEEEECTTSSEEEEEEGG--------GTEEEEEESSS
T ss_pred --cceEECCCCCEEEEEeCC--------CCeEEEEECCC
Confidence 344554 2 368887432 24799999875
No 196
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=68.92 E-value=69 Score=29.15 Aligned_cols=100 Identities=11% Similarity=0.061 Sum_probs=51.4
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeE--EEEeCcCCCCcEEEccCCccC
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDV--YVLDMVNNSSRWRRVKPMSVA 206 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v--~~~d~~~~t~~W~~~~~~p~~ 206 (446)
...++.+|+.+.+...+.......|. ..+..-++ .||+.+.... ....+ |.+|. .+.+.+.+...+..
T Consensus 28 ~i~~~~~d~~~g~~~~~~~~~~~~p~---~l~~spdg~~l~~~~~~~~----~~~~v~~~~~~~--~~g~~~~~~~~~~~ 98 (361)
T 3scy_A 28 GIYTFRFNEETGESLPLSDAEVANPS---YLIPSADGKFVYSVNEFSK----DQAAVSAFAFDK--EKGTLHLLNTQKTM 98 (361)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSCCC---SEEECTTSSEEEEEECCSS----TTCEEEEEEEET--TTTEEEEEEEEECS
T ss_pred CEEEEEEeCCCCCEEEeecccCCCCc---eEEECCCCCEEEEEEccCC----CCCcEEEEEEeC--CCCcEEEeeEeccC
Confidence 34567788888888776543211122 23332344 5777654311 12345 44555 55677766554432
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
........++++.||+.... -..+.+||..++
T Consensus 99 ~~~p~~~~~dg~~l~~~~~~------~~~v~~~~~~~~ 130 (361)
T 3scy_A 99 GADPCYLTTNGKNIVTANYS------GGSITVFPIGQD 130 (361)
T ss_dssp SSCEEEEEECSSEEEEEETT------TTEEEEEEBCTT
T ss_pred CCCcEEEEECCCEEEEEECC------CCEEEEEEeCCC
Confidence 22222222353567766532 157788887643
No 197
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=68.89 E-value=49 Score=33.31 Aligned_cols=117 Identities=14% Similarity=0.178 Sum_probs=65.1
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC---cc---ceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA---RS---FFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~---r~---~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
.++.||+.... +.++.+|..+-+..|+.-...+.. .+ ..+.++.+ ++||+... -..+.
T Consensus 67 ~~g~vyv~~~~--------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~-~~v~~~t~-------dg~l~ 130 (582)
T 1flg_A 67 SDGVIYVTASY--------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYG-DKVFFGTL-------DASVV 130 (582)
T ss_dssp ETTEEEEEETT--------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEET-TEEEEEET-------TTEEE
T ss_pred ECCEEEEEcCC--------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEEC-CEEEEEeC-------CCEEE
Confidence 68999998652 238889983334458775433221 11 12334556 79988532 15789
Q ss_pred EEECCCCc--EEecCCCCccCC-cceEEEEECC------EEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEE
Q 013264 238 VYDVEADE--WRMLPEMDEERD-ECQGVCLEGD------RFFVVSGYGTESQGRFKPDAECYDPKTGS--WSK 299 (446)
Q Consensus 238 ~yd~~t~~--W~~~~~~~~~r~-~~~~~~~~~~------~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~ 299 (446)
.+|..|.+ |+.-..-+.... ...+-++.++ .+|+ |....+ ......+++||+++++ |+.
T Consensus 131 AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e--~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 131 ALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDE--FGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGG--GCCBCEEEEECTTTCCEEEEE
T ss_pred EEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEE-eccccc--cCCCCEEEEEECCCCCEEeec
Confidence 99998874 885432211111 1122344555 6665 321110 0123479999999875 965
No 198
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=68.18 E-value=93 Score=31.73 Aligned_cols=105 Identities=8% Similarity=-0.048 Sum_probs=54.1
Q ss_pred eEEEEeCcCCC-CcEEEccCC-ccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCcc----C
Q 013264 184 DVYVLDMVNNS-SRWRRVKPM-SVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEE----R 256 (446)
Q Consensus 184 ~v~~~d~~~~t-~~W~~~~~~-p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----r 256 (446)
.++++|. .+ .+-..+... ........++. .|+ .|++....... ....++++|..+.+...+...... .
T Consensus 264 ~l~~~d~--~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 338 (741)
T 2ecf_A 264 KLGVISP--AEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQ--KKLDLVEVTLASNQQRVLAHETSPTWVPL 338 (741)
T ss_dssp EEEEECS--STTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTS--SEEEEEEEETTTCCEEEEEEEECSSCCCC
T ss_pred EEEEEEC--CCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccC--CeEEEEEEECCCCceEEEEEcCCCCcCCc
Confidence 7888998 66 654444322 11111222333 334 45444332221 236889999999887765322111 0
Q ss_pred CcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 257 DECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 257 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
.. .....-++++++.+..++ ...++.+|.... ...+.
T Consensus 339 ~~-~~~~spdg~~~~~~~~~g------~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 339 HN-SLRFLDDGSILWSSERTG------FQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp CS-CCEECTTSCEEEEECTTS------SCEEEEECSSSC-EEESC
T ss_pred CC-ceEECCCCeEEEEecCCC------ccEEEEEcCCCC-eeeee
Confidence 11 112233567666665432 246888887666 55554
No 199
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=67.91 E-value=64 Score=28.45 Aligned_cols=131 Identities=9% Similarity=0.142 Sum_probs=68.3
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCC--c-cCccceEEEEECC-cEEEEEeccCCCCCCCC
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPM--S-VARSFFACAVVGA-STVCVAGGHDGQKNALK 234 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~--p-~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~ 234 (446)
+.+...++.||+..............+++||+ .+.++..+... . ....-.+++...+ ++||+.... .
T Consensus 22 ~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~--~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~-------~ 92 (314)
T 1pjx_A 22 GPVFDKNGDFYIVAPEVEVNGKPAGEILRIDL--KTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMR-------L 92 (314)
T ss_dssp EEEECTTSCEEEEETTCEETTEECCEEEEECT--TTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETT-------T
T ss_pred CceECCCCCEEEEEeccccCCCCCCEEEEEeC--CCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECC-------C
Confidence 34443567888872110000001346999998 77887765320 0 1112234444445 789987642 3
Q ss_pred eEEEEECCCCcEEec-CCCCcc--CCcceEEEE-ECCEEEEEeCCCCC-------CCCcccCcEEEEeCCCCceEEc
Q 013264 235 SAEVYDVEADEWRML-PEMDEE--RDECQGVCL-EGDRFFVVSGYGTE-------SQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 235 ~~~~yd~~t~~W~~~-~~~~~~--r~~~~~~~~-~~~~lyv~GG~~~~-------~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
.+.+||+. ++...+ ...... ......+++ -++++|+....... ........++.||+. ++...+
T Consensus 93 ~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~ 167 (314)
T 1pjx_A 93 GLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQV 167 (314)
T ss_dssp EEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEE
T ss_pred CEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEe
Confidence 68899998 777665 322111 111123443 35688887543210 000112468999987 665544
No 200
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=67.38 E-value=86 Score=29.68 Aligned_cols=18 Identities=17% Similarity=0.073 Sum_probs=14.1
Q ss_pred ceEEEEeeCCEEEEEeCc
Q 013264 157 CQCVAVPASRKLLLIGGW 174 (446)
Q Consensus 157 ~~~~~~~~~~~lyv~GG~ 174 (446)
.|++++..++.||.+|--
T Consensus 26 ~hs~al~~~g~v~~wG~n 43 (406)
T 4d9s_A 26 SHSVALLSGDIVCSWGRG 43 (406)
T ss_dssp SEEEEEETTTEEEEEECC
T ss_pred CeEEEEEeCCEEEEEeCC
Confidence 467777689999999953
No 201
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=67.09 E-value=60 Score=27.75 Aligned_cols=103 Identities=10% Similarity=0.005 Sum_probs=54.6
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEE--c----cCCccCccceEEEEEC-CcEEEEEeccCCCCCCCCe
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRR--V----KPMSVARSFFACAVVG-ASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~--~----~~~p~~r~~~~~~~~~-d~~iyv~GG~~~~~~~~~~ 235 (446)
...+++|+|=|. .+|+++. ....+.. + +.+|. ... |+.... ++++|++-| +.
T Consensus 31 ~~~g~~y~Fkg~---------~~wr~~~--~~~~~~p~~I~~~wp~Lp~-~iD-Aa~~~~~~~~iyfFkG--------~~ 89 (207)
T 1pex_A 31 SLRGETMIFKDR---------FFWRLHP--QQVDAELFLTKSFWPELPN-RID-AAYEHPSHDLIFIFRG--------RK 89 (207)
T ss_dssp EETTEEEEEETT---------EEEEECS--SSSCCEEEEHHHHCTTSCS-SCC-EEEEETTTTEEEEEET--------TE
T ss_pred eCCCcEEEEECC---------EEEEEeC--CCcCCCceehhHhccCCCC-Ccc-EEEEeccCCcEEEEcc--------CE
Confidence 379999999652 4777776 3333221 1 23342 122 233332 379999976 45
Q ss_pred EEEEECCCCcE---EecCC--CCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 236 AEVYDVEADEW---RMLPE--MDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 236 ~~~yd~~t~~W---~~~~~--~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+++|+..+-.- ..+.. +|......-++... ++++|+|-|. ..+.||..+++
T Consensus 90 ~w~~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG~----------~ywr~d~~~~~ 147 (207)
T 1pex_A 90 FWALNGYDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSGN----------QVWRYDDTNHI 147 (207)
T ss_dssp EEEESTTCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEETT----------EEEEEETTTTE
T ss_pred EEEEeCCeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeCC----------EEEEEeCcCcc
Confidence 67776332111 12222 22211111233333 4799999873 67999987653
No 202
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=65.81 E-value=64 Score=35.48 Aligned_cols=113 Identities=9% Similarity=0.107 Sum_probs=60.8
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
+.+...++.+++.||.++ .+.+||. .+.+-.. .+....... +++...+++..+.|+.+ ..+.
T Consensus 620 ~~~~s~~~~~l~s~~~d~-------~i~vw~~--~~~~~~~--~~~~h~~~v~~~~~s~~~~~l~s~~~d------~~v~ 682 (1249)
T 3sfz_A 620 HACFSQDGQRIASCGADK-------TLQVFKA--ETGEKLL--DIKAHEDEVLCCAFSSDDSYIATCSAD------KKVK 682 (1249)
T ss_dssp EEEECTTSSEEEEEETTS-------CEEEEET--TTCCEEE--EECCCSSCEEEEEECTTSSEEEEEETT------SEEE
T ss_pred EEEECCCCCEEEEEeCCC-------eEEEEEC--CCCCEEE--EeccCCCCEEEEEEecCCCEEEEEeCC------CeEE
Confidence 334445677777777543 5889999 5554322 222222222 33333346666777643 5789
Q ss_pred EEECCCCcEEecCCCCccCCcceEEEEE---CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE
Q 013264 238 VYDVEADEWRMLPEMDEERDECQGVCLE---GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 238 ~yd~~t~~W~~~~~~~~~r~~~~~~~~~---~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
+||..+++-...-. .......+++.. ++.+.+.|+.+ ..+..||..+++-.
T Consensus 683 vwd~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~sg~~d--------~~v~vwd~~~~~~~ 736 (1249)
T 3sfz_A 683 IWDSATGKLVHTYD--EHSEQVNCCHFTNKSNHLLLATGSND--------FFLKLWDLNQKECR 736 (1249)
T ss_dssp EEETTTCCEEEEEE--CCSSCEEEEEECSSSSCCEEEEEETT--------SCEEEEETTSSSEE
T ss_pred EEECCCCceEEEEc--CCCCcEEEEEEecCCCceEEEEEeCC--------CeEEEEECCCcchh
Confidence 99998876443211 111111233333 23455555543 26899999887644
No 203
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=65.56 E-value=27 Score=31.62 Aligned_cols=106 Identities=8% Similarity=0.118 Sum_probs=57.5
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-C-CcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-G-ASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~-d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
+.+++.|+.++ .+.+||. .+.+-.. .+........+..+ . ++.+++.|+.+ ..+.+||..+
T Consensus 85 ~~~l~~~~~dg-------~i~v~d~--~~~~~~~--~~~~~~~~i~~~~~~~~~~~~l~s~~~d------g~i~iwd~~~ 147 (366)
T 3k26_A 85 HPLLAVAGSRG-------IIRIINP--ITMQCIK--HYVGHGNAINELKFHPRDPNLLLSVSKD------HALRLWNIQT 147 (366)
T ss_dssp CEEEEEEETTC-------EEEEECT--TTCCEEE--EEESCCSCEEEEEECSSCTTEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEecCCC-------EEEEEEc--hhceEee--eecCCCCcEEEEEECCCCCCEEEEEeCC------CeEEEEEeec
Confidence 56778877543 6889998 5544322 12211122222333 2 35677777653 4689999988
Q ss_pred CcEEec-CCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 244 DEWRML-PEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 244 ~~W~~~-~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+-... ..+........++++. ++..++.|+.++ .+..||+.+.+
T Consensus 148 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--------~i~i~d~~~~~ 194 (366)
T 3k26_A 148 DTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDH--------SLKLWRINSKR 194 (366)
T ss_dssp TEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTS--------CEEEEESCSHH
T ss_pred CeEEEEecccccccCceeEEEECCCCCEEEEecCCC--------CEEEEECCCCc
Confidence 764433 2112222222334433 345666666532 68999998764
No 204
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=65.27 E-value=77 Score=28.40 Aligned_cols=98 Identities=3% Similarity=-0.090 Sum_probs=50.8
Q ss_pred cEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 218 STVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 218 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+.+++.|+.+ ..+.+||..+.+-... +........++... ++.+++.|+.++ .+..||+.++
T Consensus 85 ~~~l~~~~~d------g~i~v~d~~~~~~~~~--~~~~~~~i~~~~~~~~~~~~l~s~~~dg--------~i~iwd~~~~ 148 (366)
T 3k26_A 85 HPLLAVAGSR------GIIRIINPITMQCIKH--YVGHGNAINELKFHPRDPNLLLSVSKDH--------ALRLWNIQTD 148 (366)
T ss_dssp CEEEEEEETT------CEEEEECTTTCCEEEE--EESCCSCEEEEEECSSCTTEEEEEETTS--------CEEEEETTTT
T ss_pred CCEEEEecCC------CEEEEEEchhceEeee--ecCCCCcEEEEEECCCCCCEEEEEeCCC--------eEEEEEeecC
Confidence 4677777653 4788999887643221 11111111334443 456777776543 6899999887
Q ss_pred ceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCCC
Q 013264 296 SWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 296 ~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
+-...-. ...........+.+.. ++..++.|+.++.
T Consensus 149 ~~~~~~~----~~~~~~~~v~~~~~~~---~~~~l~~~~~dg~ 184 (366)
T 3k26_A 149 TLVAIFG----GVEGHRDEVLSADYDL---LGEKIMSCGMDHS 184 (366)
T ss_dssp EEEEEEC----STTSCSSCEEEEEECT---TSSEEEEEETTSC
T ss_pred eEEEEec----ccccccCceeEEEECC---CCCEEEEecCCCC
Confidence 6443321 0111222233333321 1356777776654
No 205
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=65.25 E-value=47 Score=31.53 Aligned_cols=70 Identities=11% Similarity=0.104 Sum_probs=41.9
Q ss_pred cEEEEEecc---CCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECC--EEEEEeCCCCCCCCcccCcEEEEe
Q 013264 218 STVCVAGGH---DGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGD--RFFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 218 ~~iyv~GG~---~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~--~lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+++||.-+. ...+..-+.++++|..|.+-..- .+.+... .++++ -++ .||+..+. .++|.+||
T Consensus 292 ~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~--i~vg~~~-~~lavs~D~~~~ly~tn~~--------~~~VsViD 360 (386)
T 3sjl_D 292 DRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK--FEMGHEI-DSINVSQDEKPLLYALSTG--------DKTLYIHD 360 (386)
T ss_dssp TEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE--EEEEEEE-CEEEECSSSSCEEEEEETT--------TTEEEEEE
T ss_pred CeEEEEeccccccccCCCCCEEEEEECCCCeEEEE--EECCCCc-ceEEECCCCCeEEEEEcCC--------CCeEEEEE
Confidence 799997432 22222347899999988765432 2222221 23444 343 57776542 34799999
Q ss_pred CCCCceE
Q 013264 292 PKTGSWS 298 (446)
Q Consensus 292 ~~~~~W~ 298 (446)
..+++-.
T Consensus 361 ~~t~k~~ 367 (386)
T 3sjl_D 361 AESGEEL 367 (386)
T ss_dssp TTTCCEE
T ss_pred CCCCcEE
Confidence 9998744
No 206
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=65.17 E-value=49 Score=33.91 Aligned_cols=72 Identities=24% Similarity=0.362 Sum_probs=46.4
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCC-------cceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERD-------ECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~-------~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
++.+ ++||+.... ..+..+|..|. .|+.-...+.... ...+.++.+++||+...
T Consensus 63 ~v~~-g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~--------- 125 (668)
T 1kv9_A 63 LFHD-GVIYTSMSW-------SRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTL--------- 125 (668)
T ss_dssp EEET-TEEEEEEGG-------GEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECT---------
T ss_pred EEEC-CEEEEECCC-------CeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcC---------
Confidence 4556 899998652 57889998776 4887543332100 01245677889988542
Q ss_pred cCcEEEEeCCCCc--eEEcc
Q 013264 284 KPDAECYDPKTGS--WSKFD 301 (446)
Q Consensus 284 ~~~v~~yd~~~~~--W~~~~ 301 (446)
...++++|.++++ |+.-.
T Consensus 126 dg~l~alD~~tG~~~W~~~~ 145 (668)
T 1kv9_A 126 DGRLIALDAKTGKAIWSQQT 145 (668)
T ss_dssp TSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCEeeeecc
Confidence 1369999998874 87643
No 207
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=64.79 E-value=72 Score=27.86 Aligned_cols=131 Identities=11% Similarity=0.162 Sum_probs=60.4
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC-cEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS-RWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~-~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+.+-...-... .....+.....++.+++.|+.++ .+.+||. ... ....+..+.......
T Consensus 40 ~v~vw~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~l~~~~~dg-------~i~~~~~--~~~~~~~~~~~~~~~~~~i 107 (313)
T 3odt_A 40 TVRLWSKDDQWLGTVVYTG---QGFLNSVCYDSEKELLLFGGKDT-------MINGVPL--FATSGEDPLYTLIGHQGNV 107 (313)
T ss_dssp EEEEEEESSSEEEEEEEEC---SSCEEEEEEETTTTEEEEEETTS-------CEEEEET--TCCTTSCC-CEECCCSSCE
T ss_pred cEEEEECCCCEEEEEeecC---CccEEEEEECCCCCEEEEecCCC-------eEEEEEe--eecCCCCcccchhhcccCE
Confidence 4667777665433222111 11223334445677777777543 4667776 222 122222222222223
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-E-CCEEEEEeCCCCCCCCcccCcEE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-E-GDRFFVVSGYGTESQGRFKPDAE 288 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~-~~~lyv~GG~~~~~~~~~~~~v~ 288 (446)
...... +..++.|+.+ ..+.+||........... ......+.. . ++..++.|+.++ .+.
T Consensus 108 ~~~~~~-~~~l~~~~~d------~~i~~~d~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~d~--------~i~ 168 (313)
T 3odt_A 108 CSLSFQ-DGVVISGSWD------KTAKVWKEGSLVYNLQAH----NASVWDAKVVSFSENKFLTASADK--------TIK 168 (313)
T ss_dssp EEEEEE-TTEEEEEETT------SEEEEEETTEEEEEEECC----SSCEEEEEEEETTTTEEEEEETTS--------CEE
T ss_pred EEEEec-CCEEEEEeCC------CCEEEEcCCcEEEecccC----CCceeEEEEccCCCCEEEEEECCC--------CEE
Confidence 333444 4555666543 467888833322222211 111122222 2 456666666432 588
Q ss_pred EEeCC
Q 013264 289 CYDPK 293 (446)
Q Consensus 289 ~yd~~ 293 (446)
.||..
T Consensus 169 i~d~~ 173 (313)
T 3odt_A 169 LWQND 173 (313)
T ss_dssp EEETT
T ss_pred EEecC
Confidence 88843
No 208
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=64.45 E-value=64 Score=27.20 Aligned_cols=134 Identities=11% Similarity=0.099 Sum_probs=69.0
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--cEEE--c----cCCccCccceEEEEE-CCcEEEEEeccCCCCCCC
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--RWRR--V----KPMSVARSFFACAVV-GASTVCVAGGHDGQKNAL 233 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~W~~--~----~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~ 233 (446)
..++++|+|=|. .+|+++. ... .... + +.+|.. --|+... .++++|++-|
T Consensus 14 ~~~g~~yfFkg~---------~~Wr~~~--~~~~~~~~p~~Is~~w~glP~~--IDAa~~~~~~~~~yfFkG-------- 72 (195)
T 1itv_A 14 EIGNQLYLFKDG---------KYWRFSE--GRGSRPQGPFLIADKWPALPRK--LDSVFEEPLSKKLFFFSG-------- 72 (195)
T ss_dssp EETTEEEEEETT---------EEEEECC--SSSCCCEEEEEHHHHCTTSCSS--CSEEEECTTTCCEEEEET--------
T ss_pred EeCCEEEEEECC---------EEEEEEC--CccccCCCcEEhhhccCCCCCC--ccEEEEECCCCeEEEEeC--------
Confidence 379999999652 4788877 331 2211 1 233421 1223333 1378999977
Q ss_pred CeEEEEECCCCcE-EecCC--CCcc--CCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE-----EcccC
Q 013264 234 KSAEVYDVEADEW-RMLPE--MDEE--RDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS-----KFDHV 303 (446)
Q Consensus 234 ~~~~~yd~~t~~W-~~~~~--~~~~--r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~-----~~~~~ 303 (446)
+..++|+..+..- ..+.. +|.. ... +++.-.++++|+|-|. ..+.||..+++=. .+...
T Consensus 73 ~~yw~~~~~~~~~Pk~i~~~G~p~~~~~iD-AA~~~~~g~~yfFkg~----------~ywr~d~~~~~~~~gyPr~i~~~ 141 (195)
T 1itv_A 73 RQVWVYTGASVLGPRRLDKLGLGADVAQVT-GALRSGRGKMLLFSGR----------RLWRFDVKAQMVDPRSASEVDRM 141 (195)
T ss_dssp TEEEEEETTEEEEEEEGGGGTCCTTCCCCC-EEEECSTTEEEEEETT----------EEEEEETTTTEECGGGCEEHHHH
T ss_pred CEEEEEcCCccCCCEEeeecccCCCcccee-EEEEcCCCeEEEEeCC----------EEEEEeCCcccccCCCccChhhc
Confidence 4667787542110 01111 2221 122 2333236799999773 5789998775421 11112
Q ss_pred CCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 304 WPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 304 ~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
+++ . +..-.++...++ .+|.|-|..
T Consensus 142 w~G-v--p~~idaa~~~~g-----~~Yffkg~~ 166 (195)
T 1itv_A 142 FPG-V--PLDTHDVFQFRE-----KAYFCQDRF 166 (195)
T ss_dssp STT-S--CSSCSEEEEETT-----EEEEEETTE
T ss_pred CCC-C--CCCCCEEEEeCC-----eEEEEeCCE
Confidence 221 2 223334444455 899998853
No 209
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=64.23 E-value=72 Score=27.69 Aligned_cols=114 Identities=11% Similarity=0.043 Sum_probs=65.2
Q ss_pred EEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEEC-CcEEEEEeccCCCCCCCCeE
Q 013264 159 CVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVG-ASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 159 ~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~-d~~iyv~GG~~~~~~~~~~~ 236 (446)
..++.. ++.||+..... ....++++++ ....-+.+..... ..-.++++-. +++||+.-.. .+.+
T Consensus 126 ~i~vd~~~g~lyv~~~~~-----~~~~I~~~~~--dg~~~~~~~~~~~-~~P~gia~d~~~~~lyv~d~~------~~~I 191 (267)
T 1npe_A 126 GIVTDPVRGNLYWTDWNR-----DNPKIETSHM--DGTNRRILAQDNL-GLPNGLTFDAFSSQLCWVDAG------THRA 191 (267)
T ss_dssp EEEEETTTTEEEEEECCS-----SSCEEEEEET--TSCCCEEEECTTC-SCEEEEEEETTTTEEEEEETT------TTEE
T ss_pred EEEEeeCCCEEEEEECCC-----CCcEEEEEec--CCCCcEEEEECCC-CCCcEEEEcCCCCEEEEEECC------CCEE
Confidence 344433 68999985321 1347888988 4433333321111 1223344432 2689998532 2689
Q ss_pred EEEECCCCcEEec-CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE
Q 013264 237 EVYDVEADEWRML-PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 237 ~~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
.+||+.+..-..+ .....| .++++.++.||+.... .+.|.++|+.+++-.
T Consensus 192 ~~~~~~g~~~~~~~~~~~~P----~gi~~d~~~lyva~~~--------~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 192 ECLNPAQPGRRKVLEGLQYP----FAVTSYGKNLYYTDWK--------TNSVIAMDLAISKEM 242 (267)
T ss_dssp EEEETTEEEEEEEEECCCSE----EEEEEETTEEEEEETT--------TTEEEEEETTTTEEE
T ss_pred EEEecCCCceEEEecCCCCc----eEEEEeCCEEEEEECC--------CCeEEEEeCCCCCce
Confidence 9999876432222 222222 4566778999997542 247999999987654
No 210
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=63.60 E-value=83 Score=28.17 Aligned_cols=104 Identities=11% Similarity=0.124 Sum_probs=56.2
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEE--ECCcEEEEEeccCCCCCCCCeEEEEEC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAV--VGASTVCVAGGHDGQKNALKSAEVYDV 241 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~--~~d~~iyv~GG~~~~~~~~~~~~~yd~ 241 (446)
.++..++.|+.+ ..+.+||. .+.+...+... ...-.++.. ..++.+++.|+.+ ..+.+||.
T Consensus 96 ~~~~~l~s~~~d-------g~v~iwd~--~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~~d------g~i~vwd~ 158 (368)
T 3mmy_A 96 DDGSKVFTASCD-------KTAKMWDL--SSNQAIQIAQH--DAPVKTIHWIKAPNYSCVMTGSWD------KTLKFWDT 158 (368)
T ss_dssp TTSSEEEEEETT-------SEEEEEET--TTTEEEEEEEC--SSCEEEEEEEECSSCEEEEEEETT------SEEEEECS
T ss_pred cCCCEEEEEcCC-------CcEEEEEc--CCCCceeeccc--cCceEEEEEEeCCCCCEEEEccCC------CcEEEEEC
Confidence 356666677644 36889999 66665543221 111122222 2346777777654 46889998
Q ss_pred CCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 242 EADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 242 ~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+.+-... +.... ...+.......+++.++ ...+..||..+..
T Consensus 159 ~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~---------~~~i~~~~~~~~~ 201 (368)
T 3mmy_A 159 RSSNPMMV--LQLPE-RCYCADVIYPMAVVATA---------ERGLIVYQLENQP 201 (368)
T ss_dssp SCSSCSEE--EECSS-CEEEEEEETTEEEEEEG---------GGCEEEEECSSSC
T ss_pred CCCcEEEE--EecCC-CceEEEecCCeeEEEeC---------CCcEEEEEecccc
Confidence 77642211 11111 12344555665555443 2357888887653
No 211
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=63.13 E-value=1.3e+02 Score=30.36 Aligned_cols=111 Identities=10% Similarity=0.047 Sum_probs=57.9
Q ss_pred cCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC-cEEecCCCCccCC--
Q 013264 182 VPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD-EWRMLPEMDEERD-- 257 (446)
Q Consensus 182 ~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~r~-- 257 (446)
...++++|. .+.+-..+.......... .++...|++..+++..+... ....+.++|..+. ....+........
T Consensus 234 ~~~l~~~d~--~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~-~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 234 HVTVGIYHL--ATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQ-NECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp EEEEEEEET--TTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTS-CEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred eeEEEEEEC--CCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCC-CeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 457999999 777665554321111222 23333345533443333221 2358899999988 6765532111110
Q ss_pred cceEEEE-E--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 258 ECQGVCL-E--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 258 ~~~~~~~-~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
....+++ - ++++++.+..++ ...++.+|........+.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~ 351 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVT 351 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECC
T ss_pred ccCCceeecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecC
Confidence 0012223 2 677666554432 246888887777777665
No 212
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=61.72 E-value=63 Score=29.60 Aligned_cols=149 Identities=13% Similarity=0.111 Sum_probs=70.0
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCE-EEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC----
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRK-LLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA---- 206 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~---- 206 (446)
.++.+|........+..... ..........-+++ |+......+. ....++++|+ .+.+-+.+..++..
T Consensus 217 ~l~~~d~~~~~~~~l~~~~~--~~~~~~~~~spdg~~l~~~~~~~~~---~~~~l~~~d~--~~g~~~~l~~~~~~~~~~ 289 (388)
T 3pe7_A 217 RMWLINEDGTNMRKVKTHAE--GESCTHEFWVPDGSALVYVSYLKGS---PDRFIYSADP--ETLENRQLTSMPACSHLM 289 (388)
T ss_dssp SEEEEETTSCCCEESCCCCT--TEEEEEEEECTTSSCEEEEEEETTC---CCEEEEEECT--TTCCEEEEEEECCEEEEE
T ss_pred eEEEEeCCCCceEEeeeCCC--CcccccceECCCCCEEEEEecCCCC---CcceEEEEec--CCCceEEEEcCCCceeee
Confidence 56777776666555544321 11111222223454 5443322211 1235999999 77776666544320
Q ss_pred --ccceEEEEECCcEEEEEe----ccCCCCCCCCeEEEEECCCCcEEecCCCCcc----------CCcceEEEEECC-EE
Q 013264 207 --RSFFACAVVGASTVCVAG----GHDGQKNALKSAEVYDVEADEWRMLPEMDEE----------RDECQGVCLEGD-RF 269 (446)
Q Consensus 207 --r~~~~~~~~~d~~iyv~G----G~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----------r~~~~~~~~~~~-~l 269 (446)
.......--+ .+|++.. |.... ....++++|..+++-+.+...... ... .....-++ .|
T Consensus 290 ~~~~~~~~spdg-~~l~~~~~~~~~~~~~--~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~spDg~~l 365 (388)
T 3pe7_A 290 SNYDGSLMVGDG-SDAPVDVQDDSGYKIE--NDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHP-HPSFTPDDKQI 365 (388)
T ss_dssp ECTTSSEEEEEE-CCC------------C--CCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCC-CCEECTTSSEE
T ss_pred ecCCCCeEccCC-CcceeEeeeccccccC--CCCEEEEEeccCCceEEeccccCcccccccccccCCC-CccCCCCCCEE
Confidence 0011112222 2333321 11111 236899999999887766433320 111 11222344 56
Q ss_pred EEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 270 FVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 270 yv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
++.....+ ...++.+|+.+..|
T Consensus 366 ~~~s~~~g------~~~l~~~~l~~~~~ 387 (388)
T 3pe7_A 366 LFTSDVHG------KPALYLATLPESVW 387 (388)
T ss_dssp EEEECTTS------SCEEEEEECCGGGG
T ss_pred EEEecCCC------ceeEEEEECChhcc
Confidence 65554432 23689999887766
No 213
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=61.20 E-value=58 Score=33.44 Aligned_cols=71 Identities=21% Similarity=0.339 Sum_probs=47.0
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccC-------CcceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEER-------DECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r-------~~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
++.+ ++||+.... ..++.+|..|. .|+.-...+... ....+.++.+++||+...
T Consensus 74 ~v~~-g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v~v~~~--------- 136 (677)
T 1kb0_A 74 VVVD-GIMYVSASW-------SVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKVYVGAW--------- 136 (677)
T ss_dssp EEET-TEEEEECGG-------GCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEEEEECT---------
T ss_pred EEEC-CEEEEECCC-------CeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEEEEEcC---------
Confidence 4456 899998652 57899998877 498764433210 011355678899998643
Q ss_pred cCcEEEEeCCCCc--eEEc
Q 013264 284 KPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 284 ~~~v~~yd~~~~~--W~~~ 300 (446)
...++++|.++++ |+.-
T Consensus 137 dg~l~alD~~tG~~~W~~~ 155 (677)
T 1kb0_A 137 DGRLIALDAATGKEVWHQN 155 (677)
T ss_dssp TSEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEECCCCCEEeeec
Confidence 1369999998874 8764
No 214
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=61.06 E-value=70 Score=32.89 Aligned_cols=72 Identities=25% Similarity=0.351 Sum_probs=46.4
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccC-----C--cceEEEEECCEEEEEeCCCCCCCCcc
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEER-----D--ECQGVCLEGDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r-----~--~~~~~~~~~~~lyv~GG~~~~~~~~~ 283 (446)
++.+ ++||+.... ..+..+|..|. .|+.-...+... . ...+.++.+++||+...
T Consensus 67 ~v~~-g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~--------- 129 (689)
T 1yiq_A 67 IVVD-GVMYTTGPF-------SVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVL--------- 129 (689)
T ss_dssp EEET-TEEEEECGG-------GCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT---------
T ss_pred EEEC-CEEEEEcCC-------CeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEcc---------
Confidence 3456 899997642 46889998776 498654333110 0 01245678899988542
Q ss_pred cCcEEEEeCCCCc--eEEcc
Q 013264 284 KPDAECYDPKTGS--WSKFD 301 (446)
Q Consensus 284 ~~~v~~yd~~~~~--W~~~~ 301 (446)
...++++|.+|++ |+.-.
T Consensus 130 dg~l~AlDa~TG~~~W~~~~ 149 (689)
T 1yiq_A 130 DGRLEAIDAKTGQRAWSVDT 149 (689)
T ss_dssp TSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEECCCCCEeeeecC
Confidence 1369999998874 87654
No 215
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=60.30 E-value=93 Score=27.64 Aligned_cols=105 Identities=17% Similarity=0.326 Sum_probs=55.3
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc----EEEccCCccCccceEEEEECCcE-EEEEeccCCCCCCCCeEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR----WRRVKPMSVARSFFACAVVGAST-VCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~----W~~~~~~p~~r~~~~~~~~~d~~-iyv~GG~~~~~~~~~~~~~ 238 (446)
.++.+++.|+.+ ..+.+||. .+.. -.... .....-.+++...+++ .++.|+.+ ..+.+
T Consensus 21 ~~~~~l~~~~~d-------~~v~iw~~--~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~d------g~i~~ 83 (342)
T 1yfq_A 21 PSKSLLLITSWD-------GSLTVYKF--DIQAKNVDLLQSL--RYKHPLLCCNFIDNTDLQIYVGTVQ------GEILK 83 (342)
T ss_dssp GGGTEEEEEETT-------SEEEEEEE--ETTTTEEEEEEEE--ECSSCEEEEEEEESSSEEEEEEETT------SCEEE
T ss_pred CCCCEEEEEcCC-------CeEEEEEe--CCCCccccceeee--ecCCceEEEEECCCCCcEEEEEcCC------CeEEE
Confidence 345556666643 35778887 4444 22222 1222223333333356 66666643 47899
Q ss_pred EEC-CCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 239 YDV-EADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 239 yd~-~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
||. .+++-..+....... ...++.+..+.+++.|+.+ ..+..||+.+
T Consensus 84 wd~~~~~~~~~~~~~~~~~-~v~~l~~~~~~~l~s~~~d--------~~i~iwd~~~ 131 (342)
T 1yfq_A 84 VDLIGSPSFQALTNNEANL-GICRICKYGDDKLIAASWD--------GLIEVIDPRN 131 (342)
T ss_dssp ECSSSSSSEEECBSCCCCS-CEEEEEEETTTEEEEEETT--------SEEEEECHHH
T ss_pred EEeccCCceEeccccCCCC-ceEEEEeCCCCEEEEEcCC--------CeEEEEcccc
Confidence 999 888776655411111 1133444435555566543 2688888764
No 216
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=60.10 E-value=76 Score=31.77 Aligned_cols=72 Identities=17% Similarity=0.334 Sum_probs=46.5
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEEC-CCC--cEEecCCCCcc-C------CcceEEEEECCEEEEEeCCCCCCCCc
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDV-EAD--EWRMLPEMDEE-R------DECQGVCLEGDRFFVVSGYGTESQGR 282 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~-~t~--~W~~~~~~~~~-r------~~~~~~~~~~~~lyv~GG~~~~~~~~ 282 (446)
++.+ ++||+.... ...++.+|. .+. .|+.-...... + ....+.++.++++|+...
T Consensus 59 ~v~~-g~vyv~~~~------~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~-------- 123 (571)
T 2ad6_A 59 LVIG-DMMYVHSAF------PNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQIVKKQA-------- 123 (571)
T ss_dssp EEET-TEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECT--------
T ss_pred EEEC-CEEEEEeCC------CCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCEEEEEeC--------
Confidence 4456 899998652 146899998 766 59875433211 0 001345678999998643
Q ss_pred ccCcEEEEeCCCC--ceEEc
Q 013264 283 FKPDAECYDPKTG--SWSKF 300 (446)
Q Consensus 283 ~~~~v~~yd~~~~--~W~~~ 300 (446)
...++++|.+++ .|+.-
T Consensus 124 -dg~l~alD~~tG~~~W~~~ 142 (571)
T 2ad6_A 124 -NGHLLALDAKTGKINWEVE 142 (571)
T ss_dssp -TSEEEEEETTTCCEEEEEE
T ss_pred -CCEEEEEECCCCCEEEEec
Confidence 136999999887 58753
No 217
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=58.98 E-value=93 Score=29.74 Aligned_cols=109 Identities=11% Similarity=0.105 Sum_probs=61.6
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
++.||+.--. ..+.++|+ .++....+.. ....-.++++-.++ .|||....... ....+..++..
T Consensus 149 ~g~Lyv~d~~--------~~I~~id~--~~~~v~~~~~--~~~~P~~ia~d~~G~~lyvad~~~~~--~~~~v~~~~~~- 213 (430)
T 3tc9_A 149 HNHLYLVGEQ--------HPTRLIDF--EKEYVSTVYS--GLSKVRTICWTHEADSMIITNDQNNN--DRPNNYILTRE- 213 (430)
T ss_dssp EEEEEEEEBT--------EEEEEEET--TTTEEEEEEC--CCSCEEEEEECTTSSEEEEEECCSCT--TSEEEEEEEGG-
T ss_pred CCeEEEEeCC--------CcEEEEEC--CCCEEEEEec--CCCCcceEEEeCCCCEEEEEeCCCCc--ccceEEEEeCC-
Confidence 5789998431 57899999 7777776643 11112233333334 59998654322 12356667653
Q ss_pred CcEE---ecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 244 DEWR---MLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 244 ~~W~---~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
..|. .++.+..+ +++++. ++.||+.--. ...+++||+.+..-..+
T Consensus 214 g~~~~~~~l~~~~~p----~giavdp~~g~lyv~d~~--------~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 214 SGFKVITELTKGQNC----NGAETHPINGELYFNSWN--------AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GTSCSEEEEEECSSC----CCEEECTTTCCEEEEETT--------TTEEEEEETTTTEEEEE
T ss_pred CceeeeeeeccCCCc----eEEEEeCCCCEEEEEECC--------CCEEEEEECCCCcEEEE
Confidence 3332 33333222 344554 5789987432 23799999987765333
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=58.91 E-value=1.6e+02 Score=30.00 Aligned_cols=119 Identities=17% Similarity=0.266 Sum_probs=66.4
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCC---CcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEE
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNS---SRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t---~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~y 239 (446)
..++.||+....+. ....++.+|+ .+ ..|+.+-+-.... . .....+ ++|++....++ ...++++
T Consensus 289 ~~g~~l~~~t~~~~----~~~~l~~~d~--~~~~~~~~~~l~~~~~~~-~-~~s~~g-~~lv~~~~~~g----~~~l~~~ 355 (693)
T 3iuj_A 289 NKGSTLYLLTNRDA----PNRRLVTVDA--ANPGPAHWRDLIPERQQV-L-TVHSGS-GYLFAEYMVDA----TARVEQF 355 (693)
T ss_dssp EETTEEEEEECTTC----TTCEEEEEET--TSCCGGGCEEEECCCSSC-E-EEEEET-TEEEEEEEETT----EEEEEEE
T ss_pred ccCCEEEEEECCCC----CCCEEEEEeC--CCCCccccEEEecCCCCE-E-EEEEEC-CEEEEEEEECC----eeEEEEE
Confidence 35788998876532 2457999998 44 3487764322222 2 444555 67766544332 3578999
Q ss_pred ECCCCcEEecCCCCccCCcceEEEE--ECCEEEEE-eCCCCCCCCcccCcEEEEeCCCCceEEccc
Q 013264 240 DVEADEWRMLPEMDEERDECQGVCL--EGDRFFVV-SGYGTESQGRFKPDAECYDPKTGSWSKFDH 302 (446)
Q Consensus 240 d~~t~~W~~~~~~~~~r~~~~~~~~--~~~~lyv~-GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 302 (446)
|..+...+.++ ++..... ..... .++.|++. .+.. ....++.||+.+++.+.+..
T Consensus 356 d~~g~~~~~l~-~p~~~~~-~~~~~~~d~~~l~~~~ss~~------tP~~l~~~d~~~g~~~~l~~ 413 (693)
T 3iuj_A 356 DYEGKRVREVA-LPGLGSV-SGFNGKHDDPALYFGFENYA------QPPTLYRFEPKSGAISLYRA 413 (693)
T ss_dssp CTTSCEEEEEC-CSSSSEE-EECCCCTTCSCEEEEEECSS------SCCEEEEECTTTCCEEEEEC
T ss_pred ECCCCeeEEee-cCCCceE-EeeecCCCCCEEEEEecCCC------CCCEEEEEECCCCeEEEEEe
Confidence 98866555543 2221110 11111 12344443 3322 24589999999988877653
No 219
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=58.32 E-value=1.3e+02 Score=28.55 Aligned_cols=18 Identities=17% Similarity=0.102 Sum_probs=14.1
Q ss_pred cceEEEEECCcEEEEEec
Q 013264 208 SFFACAVVGASTVCVAGG 225 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG 225 (446)
..|+++...+++||..|-
T Consensus 188 ~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 188 ADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEecCCeEEEeeC
Confidence 457777777799999984
No 220
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=57.36 E-value=1.2e+02 Score=28.18 Aligned_cols=108 Identities=9% Similarity=0.054 Sum_probs=56.5
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc-cCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV-KPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~-~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
++.+++.|+.+ ..+.+||. .+.+-... ...+....-.+++...+++..+.|+.+ ..+.+||..+
T Consensus 181 ~~~~l~~~~~d-------~~i~iwd~--~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d------g~i~iwd~~~ 245 (437)
T 3gre_A 181 EKSLLVALTNL-------SRVIIFDI--RTLERLQIIENSPRHGAVSSICIDEECCVLILGTTR------GIIDIWDIRF 245 (437)
T ss_dssp SCEEEEEEETT-------SEEEEEET--TTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETT------SCEEEEETTT
T ss_pred CCCEEEEEeCC-------CeEEEEeC--CCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCC------CeEEEEEcCC
Confidence 46777777754 36899999 55543222 211111222233333346777777654 4688999988
Q ss_pred CcEEecCCCCccCCcceEEEEE-----CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 244 DEWRMLPEMDEERDECQGVCLE-----GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 244 ~~W~~~~~~~~~r~~~~~~~~~-----~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+-...-..+.. ....+++.. ++.+.+.|+.+ ..+..||..+++
T Consensus 246 ~~~~~~~~~~~~-~~v~~~~~~~~~s~~~~~l~s~~~d--------g~i~iwd~~~~~ 294 (437)
T 3gre_A 246 NVLIRSWSFGDH-APITHVEVCQFYGKNSVIVVGGSSK--------TFLTIWNFVKGH 294 (437)
T ss_dssp TEEEEEEBCTTC-EEEEEEEECTTTCTTEEEEEEESTT--------EEEEEEETTTTE
T ss_pred ccEEEEEecCCC-CceEEEEeccccCCCccEEEEEcCC--------CcEEEEEcCCCc
Confidence 655432111111 011122221 34455666543 268899998775
No 221
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=56.71 E-value=1.6e+02 Score=30.01 Aligned_cols=124 Identities=11% Similarity=0.053 Sum_probs=67.8
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
.....-+++..+++..... ..+.++++|. .+..++.+..-.... ...+.-+ +.+|+....+. ....+.+
T Consensus 231 ~~~~SpDG~~l~~~~~~~~---~~~~l~~~~~--~~~~~~~l~~~~~~~--~~~~~~~-g~l~~~s~~~~---~~~~l~~ 299 (695)
T 2bkl_A 231 QSDLSRDGKYLFVYILRGW---SENDVYWKRP--GEKDFRLLVKGVGAK--YEVHAWK-DRFYVLTDEGA---PRQRVFE 299 (695)
T ss_dssp EEEECTTSCCEEEEEEETT---TEEEEEEECT--TCSSCEEEEECSSCC--EEEEEET-TEEEEEECTTC---TTCEEEE
T ss_pred EEEECCCCCEEEEEEeCCC---CceEEEEEcC--CCCceEEeecCCCce--EEEEecC-CcEEEEECCCC---CCCEEEE
Confidence 3334445554444443221 2457888888 667888775422221 2222234 55766654332 2368899
Q ss_pred EECCCCc---EEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 239 YDVEADE---WRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 239 yd~~t~~---W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
+|..+.. |+.+-+-.....- ..++..+++|++....++ ...++.+|+....-..+
T Consensus 300 ~d~~~~~~~~~~~l~~~~~~~~l-~~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 300 VDPAKPARASWKEIVPEDSSASL-LSVSIVGGHLSLEYLKDA------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp EBTTBCSGGGCEEEECCCSSCEE-EEEEEETTEEEEEEEETT------EEEEEEEETTCCEEEEC
T ss_pred EeCCCCCccCCeEEecCCCCCeE-EEEEEECCEEEEEEEECC------EEEEEEEeCCCCeeEEe
Confidence 9987754 8876432211111 334555888888765433 23688888765444444
No 222
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=56.28 E-value=1.8e+02 Score=29.60 Aligned_cols=120 Identities=13% Similarity=0.176 Sum_probs=61.8
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc---EEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR---WRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~---W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.+|+....+. ....++++|. .+.. |+.+-+-.....-..+...+ +++++....++ ...++++|
T Consensus 280 ~~g~l~~~s~~~~----~~~~l~~~d~--~~~~~~~~~~l~~~~~~~~l~~~~~~~-~~lv~~~~~dg----~~~l~~~~ 348 (695)
T 2bkl_A 280 WKDRFYVLTDEGA----PRQRVFEVDP--AKPARASWKEIVPEDSSASLLSVSIVG-GHLSLEYLKDA----TSEVRVAT 348 (695)
T ss_dssp ETTEEEEEECTTC----TTCEEEEEBT--TBCSGGGCEEEECCCSSCEEEEEEEET-TEEEEEEEETT----EEEEEEEE
T ss_pred cCCcEEEEECCCC----CCCEEEEEeC--CCCCccCCeEEecCCCCCeEEEEEEEC-CEEEEEEEECC----EEEEEEEe
Confidence 3555666654321 2457999998 5544 77764322122222333445 78888776543 36788889
Q ss_pred CCCCcEEecCCCCccCCcceEEEE--ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 241 VEADEWRMLPEMDEERDECQGVCL--EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 241 ~~t~~W~~~~~~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
.....-+.+. ++..... .++.. .++.+++... +. .....++.||+.+++.+.+.
T Consensus 349 ~~g~~~~~l~-~~~~~~v-~~~~~s~d~~~l~~~~s-s~----~~P~~v~~~d~~~g~~~~l~ 404 (695)
T 2bkl_A 349 LKGKPVRTVQ-LPGVGAA-SNLMGLEDLDDAYYVFT-SF----TTPRQIYKTSVSTGKSELWA 404 (695)
T ss_dssp TTCCEEEECC-CSSSSEE-CCCBSCTTCSEEEEEEE-ET----TEEEEEEEEETTTCCEEEEE
T ss_pred CCCCeeEEec-CCCCeEE-EEeecCCCCCEEEEEEc-CC----CCCCEEEEEECCCCcEEEEe
Confidence 7654444432 1211100 01111 1234444321 11 12457899999988876654
No 223
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=56.23 E-value=94 Score=26.46 Aligned_cols=112 Identities=10% Similarity=0.160 Sum_probs=62.0
Q ss_pred CccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc--E-EEccCCccCc--cce-EEEEEC-CcEEEEEec
Q 013264 154 PMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR--W-RRVKPMSVAR--SFF-ACAVVG-ASTVCVAGG 225 (446)
Q Consensus 154 p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~--W-~~~~~~p~~r--~~~-~~~~~~-d~~iyv~GG 225 (446)
|....++... .++++|+|-|. .+|+|+. .+.. + +.+..+-.|. ... ++.... ++++|++-|
T Consensus 67 p~~iDAa~~~~~~~~iyfFkG~---------~~w~~~~--~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~gk~yfFkG 135 (207)
T 1pex_A 67 PNRIDAAYEHPSHDLIFIFRGR---------KFWALNG--YDILEGYPKKISELGLPKEVKKISAAVHFEDTGKTLLFSG 135 (207)
T ss_dssp CSSCCEEEEETTTTEEEEEETT---------EEEEEST--TCCCTTCSEESTTTTCCTTCCCCCEEEECTTTSEEEEEET
T ss_pred CCCccEEEEeccCCcEEEEccC---------EEEEEeC--CeeccCCceeccccCCCCCCccccEEEEeCCCCEEEEEeC
Confidence 3333444432 26899999662 5788876 2211 1 2233221221 122 233333 379999976
Q ss_pred cCCCCCCCCeEEEEECCCCcEEe---------cCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 226 HDGQKNALKSAEVYDVEADEWRM---------LPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 226 ~~~~~~~~~~~~~yd~~t~~W~~---------~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+..++||..+++=.. .+.+|.. ..++...++++|+|-|. ..+.||..+.+
T Consensus 136 --------~~ywr~d~~~~~~d~gyPr~i~~~~~Gip~~---iDaAf~~~g~~YfFkg~----------~y~rf~~~~~~ 194 (207)
T 1pex_A 136 --------NQVWRYDDTNHIMDKDYPRLIEEDFPGIGDK---VDAVYEKNGYIYFFNGP----------IQFEYSIWSNR 194 (207)
T ss_dssp --------TEEEEEETTTTEECSSCCCBHHHHSTTSCSC---CSEEEEETTEEEEEETT----------EEEEEETTTTE
T ss_pred --------CEEEEEeCcCccccCCCCccHHHcCCCCCCC---ccEEEEcCCcEEEEECC----------EEEEEeCCccE
Confidence 577999987653210 0122221 23444568999999773 57889987765
Q ss_pred e
Q 013264 297 W 297 (446)
Q Consensus 297 W 297 (446)
=
T Consensus 195 v 195 (207)
T 1pex_A 195 I 195 (207)
T ss_dssp E
T ss_pred E
Confidence 3
No 224
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=56.21 E-value=1.5e+02 Score=28.88 Aligned_cols=104 Identities=12% Similarity=0.106 Sum_probs=57.9
Q ss_pred CEEEEEeCc-CCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 166 RKLLLIGGW-DPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 166 ~~lyv~GG~-~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
+..++.|+. + ..+.+||. .+..... ..+.........+.+ .++++++.|+.+ ..+.+||..+
T Consensus 456 ~~~l~~~~~~d-------~~i~~~~~--~~~~~~~-~~~~~~~~~v~~~~~s~~g~~l~~~~~d------g~i~iw~~~~ 519 (615)
T 1pgu_A 456 QNYVAVGLEEG-------NTIQVFKL--SDLEVSF-DLKTPLRAKPSYISISPSETYIAAGDVM------GKILLYDLQS 519 (615)
T ss_dssp SSEEEEEETTT-------SCEEEEET--TEEEEEE-ECSSCCSSCEEEEEECTTSSEEEEEETT------SCEEEEETTT
T ss_pred CCEEEEeecCC-------CeEEEEEC--CCccccc-cccCCccCceEEEEECCCCCEEEEcCCC------CeEEEeeCCC
Confidence 555666654 3 25889999 6555432 222222222333333 346777777653 4688999887
Q ss_pred CcEEecCCCCc-cCCcceEEEEE-----------CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 244 DEWRMLPEMDE-ERDECQGVCLE-----------GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 244 ~~W~~~~~~~~-~r~~~~~~~~~-----------~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.+-... +.. ......++++. ++++.+.|+.++ .+..||..+.
T Consensus 520 ~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg--------~i~iw~~~~~ 573 (615)
T 1pgu_A 520 REVKTS--RWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDT--------NIFIYSVKRP 573 (615)
T ss_dssp TEEEEC--CSCCCSSCEEEEEECCCC------CCSCCEEEEEETTS--------CEEEEESSCT
T ss_pred CcceeE--eecCCCCceeEEEEcCccccccccccCCCEEEEEcCCC--------cEEEEECCCC
Confidence 654332 221 11111233332 567777776543 6899999886
No 225
>2kwv_A RAD30 homolog B, DNA polymerase IOTA; ubiquitin-binding motif, UBM, TL protein binding-signaling protein complex; HET: DNA; NMR {Mus musculus}
Probab=55.68 E-value=5.3 Score=24.90 Aligned_cols=24 Identities=25% Similarity=0.216 Sum_probs=18.9
Q ss_pred hcccCCCCCChHHHHHHHhcccCc
Q 013264 11 QEVQNLIPGLPDEIAMECLIRVPY 34 (446)
Q Consensus 11 ~~~~~~~~~LPddl~~~iLarlP~ 34 (446)
..|+..+..||.||.+++|+--..
T Consensus 15 ~VD~eVF~~LP~dIQ~Ells~~~~ 38 (48)
T 2kwv_A 15 GVDQEVFKQLPADIQEEILSGKSR 38 (48)
T ss_dssp TCCGGGTTTSCHHHHHHHTTCCCS
T ss_pred CCCHHHHHHCcHHHHHHHHhcchH
Confidence 456677889999999999986544
No 226
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=55.38 E-value=1.2e+02 Score=27.34 Aligned_cols=95 Identities=11% Similarity=0.028 Sum_probs=51.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEE--EccCCccCccc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWR--RVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~--~~~~~p~~r~~ 209 (446)
.+..||..+.+-....... ......+++..-++.+++.|+.++ .+.+||. .+.+-. .+.. .....-
T Consensus 150 ~i~~wd~~~~~~~~~~~~~--~~~~i~~~~~~pdg~~lasg~~dg-------~i~iwd~--~~~~~~~~~~~~-~h~~~v 217 (343)
T 3lrv_A 150 TIGFQSYEDDSQYIVHSAK--SDVEYSSGVLHKDSLLLALYSPDG-------ILDVYNL--SSPDQASSRFPV-DEEAKI 217 (343)
T ss_dssp CEEEEESSSSCEEEEECCC--SSCCCCEEEECTTSCEEEEECTTS-------CEEEEES--SCTTSCCEECCC-CTTSCE
T ss_pred cEEEEECCCCcEEEEEecC--CCCceEEEEECCCCCEEEEEcCCC-------EEEEEEC--CCCCCCccEEec-cCCCCE
Confidence 5678888877764433222 121233444445778888887543 5889999 555432 2221 011111
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE 245 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 245 (446)
.+++...+++..+.|+ + +.+.+||..+.+
T Consensus 218 ~~l~fs~~g~~l~s~~-~------~~v~iwd~~~~~ 246 (343)
T 3lrv_A 218 KEVKFADNGYWMVVEC-D------QTVVCFDLRKDV 246 (343)
T ss_dssp EEEEECTTSSEEEEEE-S------SBEEEEETTSST
T ss_pred EEEEEeCCCCEEEEEe-C------CeEEEEEcCCCC
Confidence 2233333456656665 2 268999987753
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=55.11 E-value=4.8 Score=38.06 Aligned_cols=107 Identities=10% Similarity=0.012 Sum_probs=43.6
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
.++.||+.+. + ..++.+|..+.+..|+.-. .... .+.++.+ +++|+.++.+ ..+..+|..+
T Consensus 8 ~~~~v~~gs~-d-------g~v~a~d~~tG~~~W~~~~--~~~~--s~p~~~~-g~~~v~~s~d------g~l~a~d~~t 68 (369)
T 2hz6_A 8 PETLLFVSTL-D-------GSLHAVSKRTGSIKWTLKE--DPVL--QVPTHVE-EPAFLPDPND------GSLYTLGSKN 68 (369)
T ss_dssp CTTEEEEEET-T-------SEEEEEETTTCCEEEEEEC--CCSC--CCC------CCEEECTTT------CCEEEC----
T ss_pred eCCEEEEEcC-C-------CEEEEEECCCCCEEEEecC--CCce--ecceEcC-CCEEEEeCCC------CEEEEEECCC
Confidence 5677776543 2 3689999833344576543 1111 1122333 6788876432 4678899865
Q ss_pred C--cEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc--eEE
Q 013264 244 D--EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS--WSK 299 (446)
Q Consensus 244 ~--~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~--W~~ 299 (446)
+ .|+.-...+..... ..+...++.+|+ |+. ...++++|+++++ |+.
T Consensus 69 G~~~w~~~~~~~~~~~~-sp~~~~~~~v~~-g~~--------dg~v~a~D~~tG~~~w~~ 118 (369)
T 2hz6_A 69 NEGLTKLPFTIPELVQA-SPCRSSDGILYM-GKK--------QDIWYVIDLLTGEKQQTL 118 (369)
T ss_dssp -CCSEECSCCHHHHHTT-CSCC-----CCC-CEE--------EEEEEEECCC--------
T ss_pred CceeeeeeccCcccccc-CceEecCCEEEE-EeC--------CCEEEEEECCCCcEEEEe
Confidence 4 57643221111111 111113555554 221 2258888888764 654
No 228
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=55.09 E-value=1.1e+02 Score=27.04 Aligned_cols=151 Identities=13% Similarity=0.112 Sum_probs=75.8
Q ss_pred eEEEEECCCCcEEecCCCCCCCC-ccceEEEEeeCCEEEEE----eCcC------CCCCCccCeEEEEeCcCCCCcEEEc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIP-MFCQCVAVPASRKLLLI----GGWD------PITLEPVPDVYVLDMVNNSSRWRRV 200 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p-~~~~~~~~~~~~~lyv~----GG~~------~~~~~~~~~v~~~d~~~~t~~W~~~ 200 (446)
.+..||+. ++...+.......+ ......++..++.||+. |-.. .........+++||+ .+.+.+.+
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~--~~g~~~~~ 184 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP--DGSPLQRM 184 (305)
T ss_dssp EEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS--SSCCCEEE
T ss_pred EEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC--CCCcEEEE
Confidence 46677775 55555432211000 11233455568889985 3211 000112357999999 77777766
Q ss_pred cCCccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEECCCCcEEe---cCCCCccCCcceEEEE-ECCEEEEEeCC
Q 013264 201 KPMSVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDVEADEWRM---LPEMDEERDECQGVCL-EGDRFFVVSGY 275 (446)
Q Consensus 201 ~~~p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~---~~~~~~~r~~~~~~~~-~~~~lyv~GG~ 275 (446)
. ... ...+.+...|+ .||+........ ....+++||...+.... ........- .++++ .++.||+..+
T Consensus 185 ~--~~~-~p~gl~~spdg~~lyv~~~~~~~~-~~~~i~~~~~~~~~l~~~~~~~~~~~~~p--dgi~~d~~G~lwv~~~- 257 (305)
T 3dr2_A 185 A--DLD-HPNGLAFSPDEQTLYVSQTPEQGH-GSVEITAFAWRDGALHDRRHFASVPDGLP--DGFCVDRGGWLWSSSG- 257 (305)
T ss_dssp E--EES-SEEEEEECTTSSEEEEEECCC----CCCEEEEEEEETTEEEEEEEEECCSSSCC--CSEEECTTSCEEECCS-
T ss_pred e--cCC-CCcceEEcCCCCEEEEEecCCcCC-CCCEEEEEEecCCCccCCeEEEECCCCCC--CeEEECCCCCEEEecC-
Confidence 4 111 12234444444 588875422110 12578999987654221 111111111 12333 3567887542
Q ss_pred CCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 276 GTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 276 ~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
..|.+||++...-..+.
T Consensus 258 ---------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 258 ---------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp ---------SEEEEECTTSCEEEEEE
T ss_pred ---------CcEEEECCCCCEEEEEE
Confidence 25999999766655554
No 229
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=53.84 E-value=58 Score=30.82 Aligned_cols=107 Identities=9% Similarity=0.093 Sum_probs=52.1
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCC--------cEEEccCCccC-ccceEEEEECCcE-EEEEeccCCCCCCCCe
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSS--------RWRRVKPMSVA-RSFFACAVVGAST-VCVAGGHDGQKNALKS 235 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--------~W~~~~~~p~~-r~~~~~~~~~d~~-iyv~GG~~~~~~~~~~ 235 (446)
+.+++.|+.++ .+.+||. .+. ....+..+... ....+++...++. +++.|+.+ ..
T Consensus 141 ~~~lat~~~dg-------~V~vwd~--~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d------g~ 205 (430)
T 2xyi_A 141 ACVIATKTPSS-------DVLVFDY--TKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDD------HT 205 (430)
T ss_dssp EEEEEEECSSS-------CEEEEEG--GGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTT------SC
T ss_pred CcEEEEECCCC-------cEEEEEC--CCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCC------Ce
Confidence 46777776543 5888888 431 12222111111 1112333333334 66666643 46
Q ss_pred EEEEECCCC---cEEe--cCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 236 AEVYDVEAD---EWRM--LPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 236 ~~~yd~~t~---~W~~--~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+.+||..+. .+.. ...+........+++.. ++.+++.|+.+ ..+..||+.+.
T Consensus 206 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d--------g~i~i~d~~~~ 264 (430)
T 2xyi_A 206 ICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADD--------QKLMIWDTRNN 264 (430)
T ss_dssp EEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETT--------SEEEEEETTCS
T ss_pred EEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCC--------CeEEEEECCCC
Confidence 788998772 2221 11111111111334443 45667666643 36899999875
No 230
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=53.78 E-value=1.4e+02 Score=27.53 Aligned_cols=114 Identities=12% Similarity=0.093 Sum_probs=59.2
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-----c-cceEEEEECCcEEEEEeccCCCCCC
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-----R-SFFACAVVGASTVCVAGGHDGQKNA 232 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-----r-~~~~~~~~~d~~iyv~GG~~~~~~~ 232 (446)
+++..-++..++.|+.++ .+.+||. .+..-...-..... . .-.+++.-.++++.+.|+.+
T Consensus 254 ~v~~~p~~~~l~s~s~D~-------~i~lwd~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d----- 319 (380)
T 3iz6_a 254 SVKFFPDGQRFGTGSDDG-------TCRLFDM--RTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSN----- 319 (380)
T ss_dssp EEEECTTSSEEEEECSSS-------CEEEEET--TTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTT-----
T ss_pred EEEEecCCCeEEEEcCCC-------eEEEEEC--CCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECC-----
Confidence 333434677777787654 4888998 55543322111100 0 11233333346666666543
Q ss_pred CCeEEEEECCCCcEEe-cCCCCccCCc-ceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 233 LKSAEVYDVEADEWRM-LPEMDEERDE-CQGVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 233 ~~~~~~yd~~t~~W~~-~~~~~~~r~~-~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
..+.+||..+.+-.. +..+...... ..++++ -++++++.|+.++ .+..||+...
T Consensus 320 -g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~--------~i~iW~~~~~ 376 (380)
T 3iz6_a 320 -GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDK--------NLKIWAFSGH 376 (380)
T ss_dssp -SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTS--------CEEEEECCSS
T ss_pred -CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCC--------CEEEEecCCC
Confidence 468899987765432 2222211111 123333 3567777787653 5777776543
No 231
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=53.70 E-value=1.1e+02 Score=26.38 Aligned_cols=97 Identities=10% Similarity=0.134 Sum_probs=52.8
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcC-------CCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVN-------NSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~-------~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~ 236 (446)
.++++|+|=|. .+|+++... .+..|.. +|. ... |+...+ +++|++-| +.+
T Consensus 27 ~~g~~yfFkg~---------~~Wr~~~~~~~~~p~~Is~~wpg---LP~-~ID-AA~~~~-~~~yfFkG--------~~y 83 (219)
T 1hxn_A 27 NHGATYVFSGS---------HYWRLDTNRDGWHSWPIAHQWPQ---GPS-TVD-AAFSWE-DKLYLIQD--------TKV 83 (219)
T ss_dssp TTSCEEEEETT---------EEEESSSSSCTTCCEEGGGTCTT---SCS-SCS-EEEEET-TEEEEEET--------TEE
T ss_pred CCCcEEEEeCC---------EEEEEcCCCCCCCceEhhhhccC---CCC-Ccc-EEEEEC-CcEEEecC--------CEE
Confidence 58999999663 466666510 1122332 332 122 333445 89999966 578
Q ss_pred EEEECCCCcEEecC----------CCCcc--CCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 237 EVYDVEADEWRMLP----------EMDEE--RDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 237 ~~yd~~t~~W~~~~----------~~~~~--r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
++|+..++ .+..+ .+|.. ...--++... ++++|+|-|. ..+.||..+
T Consensus 84 w~~~~~~~-~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG~----------~ywr~d~~~ 144 (219)
T 1hxn_A 84 YVFLTKGG-YTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAGR----------RLWWLDLKS 144 (219)
T ss_dssp EEEECSSS-CEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEETT----------EEEEEEGGG
T ss_pred EEEeCCCC-ceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeCC----------EEEEEeCCC
Confidence 89986532 12121 12222 1111233333 5799999873 578999755
No 232
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=53.60 E-value=1.3e+02 Score=29.20 Aligned_cols=135 Identities=10% Similarity=0.043 Sum_probs=65.8
Q ss_pred EeeCCEEEEEeCcCCCCCCccCeEEEEeCcC-------CCCcEEEccCCccCccceEEEEEC-CcEEEEEeccCCCCCCC
Q 013264 162 VPASRKLLLIGGWDPITLEPVPDVYVLDMVN-------NSSRWRRVKPMSVARSFFACAVVG-ASTVCVAGGHDGQKNAL 233 (446)
Q Consensus 162 ~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~-------~t~~W~~~~~~p~~r~~~~~~~~~-d~~iyv~GG~~~~~~~~ 233 (446)
....+++|+|-|. .+|+++... .+..|..+| .. . =++.... ++++|+|=|
T Consensus 269 ~~~~ge~y~Fkg~---------~~wr~~~~~~~~~p~~I~~~Wp~LP---~~-i-DAa~~~~~~g~~~fFKg-------- 326 (450)
T 1su3_A 269 TTIRGEVMFFKDR---------FYMRTNPFYPEVELNFISVFWPQLP---NG-L-EAAYEFADRDEVRFFKG-------- 326 (450)
T ss_dssp EEETTEEEEEETT---------EEEECCTTSSSCEEEEGGGTCTTSC---SS-C-CEEEEEGGGTEEEEEET--------
T ss_pred EecCCeEEEEeCC---------EEEEEcCCCCcccceehhHhccCCC---CC-e-eEEEEEcCCCeEEEEeC--------
Confidence 3479999999763 356665510 223333332 21 1 1222221 379999966
Q ss_pred CeEEEEECCCCc--E-EecC---CCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE-----Ec
Q 013264 234 KSAEVYDVEADE--W-RMLP---EMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS-----KF 300 (446)
Q Consensus 234 ~~~~~yd~~t~~--W-~~~~---~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~-----~~ 300 (446)
+.+|+|+..+-. + ..+. .+|......-++... ++++|+|-|. ..++||..+++-. .+
T Consensus 327 ~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG~----------~yw~yd~~~~~~~~gYPk~I 396 (450)
T 1su3_A 327 NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVAN----------KYWRYDEYKRSMDPGYPKMI 396 (450)
T ss_dssp TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEETT----------EEEEEETTTTEECSSCSEEH
T ss_pred CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeCC----------EEEEEeCCCccccCCCCcch
Confidence 466777643200 0 0000 122111111233333 5899999773 6899998764321 12
Q ss_pred ccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 301 DHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 301 ~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
...+|+ . +..--++...++ ++|.|-|..
T Consensus 397 ~~~fpg-i--p~~iDAA~~~~g-----~~YFFkg~~ 424 (450)
T 1su3_A 397 AHDFPG-I--GHKVDAVFMKDG-----FFYFFHGTR 424 (450)
T ss_dssp HHHSTT-S--CSCCSEEEEETT-----EEEEEETTE
T ss_pred hhcCCC-C--CCCccEEEEcCC-----eEEEEeCCE
Confidence 111222 2 222233333444 999998753
No 233
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=53.27 E-value=50 Score=33.16 Aligned_cols=105 Identities=10% Similarity=0.050 Sum_probs=58.1
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
++.+||.... .+.+.++|+ .+.+-. ..++....-|.+++-.| ..+|+.+. ...+.+||+.+
T Consensus 166 ~~~~~V~~~~-------~~~V~viD~--~t~~v~--~~i~~g~~p~~v~~SpDGr~lyv~~~-------dg~V~viD~~~ 227 (567)
T 1qks_A 166 ENLFSVTLRD-------AGQIALIDG--STYEIK--TVLDTGYAVHISRLSASGRYLFVIGR-------DGKVNMIDLWM 227 (567)
T ss_dssp GGEEEEEETT-------TTEEEEEET--TTCCEE--EEEECSSCEEEEEECTTSCEEEEEET-------TSEEEEEETTS
T ss_pred CceEEEEeCC-------CCeEEEEEC--CCCeEE--EEEeCCCCccceEECCCCCEEEEEcC-------CCeEEEEECCC
Confidence 5677777542 457999999 666433 22333333445554434 46787642 15799999852
Q ss_pred CcEEecCCCCccCCcceEEEEE-----CC-EEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 244 DEWRMLPEMDEERDECQGVCLE-----GD-RFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 244 ~~W~~~~~~~~~r~~~~~~~~~-----~~-~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
.+-+.+...+....- ..+++. ++ .+|+..- ..+.+.++|..+.+
T Consensus 228 ~t~~~v~~i~~G~~P-~~ia~s~~~~pDGk~l~v~n~--------~~~~v~ViD~~t~~ 277 (567)
T 1qks_A 228 KEPTTVAEIKIGSEA-RSIETSKMEGWEDKYAIAGAY--------WPPQYVIMDGETLE 277 (567)
T ss_dssp SSCCEEEEEECCSEE-EEEEECCSTTCTTTEEEEEEE--------ETTEEEEEETTTCC
T ss_pred CCCcEeEEEecCCCC-ceeEEccccCCCCCEEEEEEc--------cCCeEEEEECCCCc
Confidence 222333333322221 344444 44 6777643 23578888977654
No 234
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=52.50 E-value=41 Score=31.56 Aligned_cols=75 Identities=13% Similarity=0.071 Sum_probs=42.5
Q ss_pred eCCEEEEEeCcCC--CCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcE-EEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDP--ITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAST-VCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~--~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~-iyv~GG~~~~~~~~~~~~~yd 240 (446)
-+++|||...... ......++++++|. .+.+ .+..++.+...+++++-.|++ +++++... .+++.+||
T Consensus 277 d~~~lyV~~~~~~~~~~~~~~~~V~VID~--~t~~--vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~-----~~~V~ViD 347 (373)
T 2mad_H 277 SSDGIYLLTSEQSAWKLHAAAKEVTSVTG--LVGQ--TSSQISLGHDVDAISVAQDGGPDLYALSAG-----TEVLHIYD 347 (373)
T ss_pred CCCEEEEEeccCCcccccCCCCeEEEEEC--CCCE--EEEEEECCCCcCeEEECCCCCeEEEEEcCC-----CCeEEEEE
Confidence 3578898754211 11113568999999 5444 434444444455666655555 44443321 26899999
Q ss_pred CCCCcEE
Q 013264 241 VEADEWR 247 (446)
Q Consensus 241 ~~t~~W~ 247 (446)
..+.+=.
T Consensus 348 ~~t~~vv 354 (373)
T 2mad_H 348 AGAGDQD 354 (373)
T ss_pred CCCCCEE
Confidence 8776543
No 235
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=52.12 E-value=1.2e+02 Score=31.24 Aligned_cols=139 Identities=10% Similarity=0.031 Sum_probs=71.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc--CCccCcc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK--PMSVARS 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~--~~p~~r~ 208 (446)
.+.++|+....-..+.......|+ .+++. .++.||+..-. ....++++++ ....-+.+. .+..|
T Consensus 476 ~I~v~d~dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~------~~~~I~~~~~--dG~~~~~l~~~~l~~P-- 542 (699)
T 1n7d_A 476 TVSVADTKGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG------TPAKIKKGGL--NGVDIYSLVTENIQWP-- 542 (699)
T ss_dssp CEEEEBSSSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS------SSCCEEBCCS--SSCCCCEESCSSCSSC--
T ss_pred eEEEEecCCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC------CCCeEEEEeC--CCCCeeEEEeCCCCCc--
Confidence 456666665544333222111222 23321 35778876311 1246888887 433322221 22222
Q ss_pred ceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcE
Q 013264 209 FFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 209 ~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.++++- .+++||+.-.. ...+++||+....-+.+...........++++.++.||+.-.. .+.|
T Consensus 543 -nGlavd~~~~~LY~aD~~------~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~~lywtd~~--------~~~V 607 (699)
T 1n7d_A 543 -NGITLDLLSGRLYWVDSK------LHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAI 607 (699)
T ss_dssp -CCEEECTTTCCEEEEETT------TTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETTEEEEECST--------TTCE
T ss_pred -cEEEEeccCCEEEEEecC------CCeEEEEccCCCceEEEEecCCcCCCceEeEEECCEEEEEeCC--------CCeE
Confidence 233433 23789997532 3688999987544333332211111124667788899998632 3479
Q ss_pred EEEeCCCCceE
Q 013264 288 ECYDPKTGSWS 298 (446)
Q Consensus 288 ~~yd~~~~~W~ 298 (446)
.++|+.+++-.
T Consensus 608 ~~~d~~~G~~~ 618 (699)
T 1n7d_A 608 FSANRLTGSDV 618 (699)
T ss_dssp EEEETTTEEEE
T ss_pred EEEEccCCCce
Confidence 99998776543
No 236
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=51.39 E-value=1.4e+02 Score=26.91 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=64.9
Q ss_pred EEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeE
Q 013264 159 CVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSA 236 (446)
Q Consensus 159 ~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~ 236 (446)
..++. .++.||+..-. ....++++++ ....-+.+..-.. ..-.++++- .+++||+.-.. ...+
T Consensus 124 ~iavdp~~g~ly~~d~~------~~~~I~~~~~--dG~~~~~~~~~~~-~~P~gla~d~~~~~lY~~D~~------~~~I 188 (316)
T 1ijq_A 124 AIVVDPVHGFMYWTDWG------TPAKIKKGGL--NGVDIYSLVTENI-QWPNGITLDLLSGRLYWVDSK------LHSI 188 (316)
T ss_dssp EEEEETTTTEEEEEECS------SSCEEEEEET--TSCCEEEEECSSC-SCEEEEEEETTTTEEEEEETT------TTEE
T ss_pred eEEeCCCCCEEEEEccC------CCCeEEEEcC--CCCCeEEEEECCC-CCceEEEEeccCCEEEEEECC------CCeE
Confidence 34443 47899987531 1247999998 4444333321111 122344444 23799998432 3689
Q ss_pred EEEECCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 237 EVYDVEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 237 ~~yd~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
++||.....=+.+...........++++.++.||+.-.. .+.|.++|+.+++
T Consensus 189 ~~~d~dg~~~~~~~~~~~~~~~P~giav~~~~ly~~d~~--------~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 189 SSIDVNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAIFSANRLTGS 240 (316)
T ss_dssp EEEETTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT--------TTEEEEEETTTCC
T ss_pred EEEecCCCceEEEeecCCccCCcEEEEEECCEEEEEECC--------CCeEEEEeCCCCc
Confidence 999987543333322111111125677789999997632 2479999987664
No 237
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=50.99 E-value=1.5e+02 Score=27.52 Aligned_cols=103 Identities=8% Similarity=0.095 Sum_probs=57.2
Q ss_pred EEEEeCcCCC--CcEEEccCCccCccceEEEEEC--CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCC---Ccc--
Q 013264 185 VYVLDMVNNS--SRWRRVKPMSVARSFFACAVVG--ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEM---DEE-- 255 (446)
Q Consensus 185 v~~~d~~~~t--~~W~~~~~~p~~r~~~~~~~~~--d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~-- 255 (446)
+++++. .. .+|+...+......-+++++.. ++.||+.+...... .-+++.+-...+|+.+... +..
T Consensus 33 l~~~~~--~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g---~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 33 AWFLAS--DPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLG---PTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEE--CTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CC---EEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred eEEEEC--CCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCC---ccEEEeCCCCCCceECCccccCCCccc
Confidence 667776 44 6898764222222233344332 36888876432111 2566776667899988632 211
Q ss_pred C-----C-cceEEEEE----CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 256 R-----D-ECQGVCLE----GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 256 r-----~-~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
+ . ...++++. .+.||+.+. ...+++.+-...+|+.+.
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~~---------~ggl~~S~DgG~tW~~~~ 154 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGTS---------PQGLFRSTDHGASWEPVA 154 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEEE---------TTEEEEESSTTSBCEECH
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEec---------CCcEEEEcCCCCCeEECc
Confidence 0 0 11234443 567887542 125888888888999885
No 238
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=50.52 E-value=1.5e+02 Score=26.99 Aligned_cols=159 Identities=14% Similarity=0.046 Sum_probs=77.1
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS 208 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~ 208 (446)
...++.+|..+++-..+.... .........- +++.+++...... ......++.+|. .+...+.+........
T Consensus 167 ~~~l~~~d~~~g~~~~l~~~~----~~~~~~~~sp~dg~~l~~~~~~~~-~~~~~~l~~~d~--~~~~~~~l~~~~~~~~ 239 (388)
T 3pe7_A 167 CCRLMRVDLKTGESTVILQEN----QWLGHPIYRPYDDSTVAFCHEGPH-DLVDARMWLINE--DGTNMRKVKTHAEGES 239 (388)
T ss_dssp CEEEEEEETTTCCEEEEEEES----SCEEEEEEETTEEEEEEEEECSCT-TTSSCSEEEEET--TSCCCEESCCCCTTEE
T ss_pred cceEEEEECCCCceEEeecCC----ccccccEECCCCCCEEEEEEecCC-CCCcceEEEEeC--CCCceEEeeeCCCCcc
Confidence 356888999888766654322 1112233333 4554444332211 112457999999 6676666654321111
Q ss_pred ceEEEEECCcE-EEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccC-----CcceEEEEECCEEEEEeC----CCCC
Q 013264 209 FFACAVVGAST-VCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEER-----DECQGVCLEGDRFFVVSG----YGTE 278 (446)
Q Consensus 209 ~~~~~~~~d~~-iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r-----~~~~~~~~~~~~lyv~GG----~~~~ 278 (446)
....+.-.|++ |+.+....+. ....++++|+.+++-+.+..++... .......-.+..|++... +...
T Consensus 240 ~~~~~~spdg~~l~~~~~~~~~--~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~ 317 (388)
T 3pe7_A 240 CTHEFWVPDGSALVYVSYLKGS--PDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIE 317 (388)
T ss_dssp EEEEEECTTSSCEEEEEEETTC--CCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------C
T ss_pred cccceECCCCCEEEEEecCCCC--CcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccC
Confidence 11222222444 5444332222 1135999999998877665443200 000122222333443211 1101
Q ss_pred CCCcccCcEEEEeCCCCceEEcc
Q 013264 279 SQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 279 ~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
....++.+|+.+++-..+.
T Consensus 318 ----~~~~i~~~d~~~~~~~~l~ 336 (388)
T 3pe7_A 318 ----NDPFLYVFNMKNGTQHRVA 336 (388)
T ss_dssp ----CCCEEEEEETTTTEEEEEE
T ss_pred ----CCCEEEEEeccCCceEEec
Confidence 1347999999998877665
No 239
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=50.41 E-value=91 Score=27.86 Aligned_cols=17 Identities=0% Similarity=-0.017 Sum_probs=13.1
Q ss_pred eEEEEECCEEEEEeCCC
Q 013264 260 QGVCLEGDRFFVVSGYG 276 (446)
Q Consensus 260 ~~~~~~~~~lyv~GG~~ 276 (446)
|++++.++++|.+|-..
T Consensus 152 ~~~~l~~G~v~~wG~n~ 168 (282)
T 3qhy_B 152 TALAVKNGGVIAWGDNY 168 (282)
T ss_dssp EEEEEETTEEEEEECCT
T ss_pred EEEEEECCEEEEecCCC
Confidence 56666789999998754
No 240
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=50.28 E-value=1.4e+02 Score=26.79 Aligned_cols=112 Identities=11% Similarity=0.016 Sum_probs=61.6
Q ss_pred CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC
Q 013264 165 SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD 244 (446)
Q Consensus 165 ~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~ 244 (446)
++.+|+++.. ...+++||+ .+.+.+... .+ ..-.+++...++++|+... ..+.+||+.++
T Consensus 60 ~~~l~~~d~~-------~~~i~~~d~--~~~~~~~~~-~~--~~v~~i~~~~dg~l~v~~~--------~gl~~~d~~~g 119 (326)
T 2ghs_A 60 SGTAWWFNIL-------ERELHELHL--ASGRKTVHA-LP--FMGSALAKISDSKQLIASD--------DGLFLRDTATG 119 (326)
T ss_dssp TTEEEEEEGG-------GTEEEEEET--TTTEEEEEE-CS--SCEEEEEEEETTEEEEEET--------TEEEEEETTTC
T ss_pred CCEEEEEECC-------CCEEEEEEC--CCCcEEEEE-CC--CcceEEEEeCCCeEEEEEC--------CCEEEEECCCC
Confidence 4788888643 346999999 766655442 12 1223334444578887641 35899999999
Q ss_pred cEEecCCCCccC--CcceEEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 245 EWRMLPEMDEER--DECQGVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 245 ~W~~~~~~~~~r--~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
+.+.+...+... .....+++ -++++|+....... ......++.|| +++...+
T Consensus 120 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~--~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 120 VLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKA--ETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp CEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTC--CTTCEEEEEEE--TTEEEEE
T ss_pred cEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcC--CCCceEEEEEe--CCcEEEe
Confidence 887664432211 11122233 25678774321100 01234688888 5666554
No 241
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=50.16 E-value=2.2e+02 Score=28.80 Aligned_cols=145 Identities=12% Similarity=0.163 Sum_probs=70.9
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-ccceEEEEECCcEEEEEeccCCCCCCCCeEE
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-RSFFACAVVGASTVCVAGGHDGQKNALKSAE 237 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~ 237 (446)
+++...++.+++.|+.++ .+.+||. .+..-... +... ..-.+++...+++..+.|+.+ ..+.
T Consensus 435 ~v~~s~~g~~l~sgs~Dg-------~v~vwd~--~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~s~D------~~i~ 497 (694)
T 3dm0_A 435 DVVLSSDGQFALSGSWDG-------ELRLWDL--AAGVSTRR--FVGHTKDVLSVAFSLDNRQIVSASRD------RTIK 497 (694)
T ss_dssp EEEECTTSSEEEEEETTS-------EEEEEET--TTTEEEEE--EECCSSCEEEEEECTTSSCEEEEETT------SCEE
T ss_pred EEEECCCCCEEEEEeCCC-------cEEEEEC--CCCcceeE--EeCCCCCEEEEEEeCCCCEEEEEeCC------CEEE
Confidence 344445677777777543 6889998 55543221 1111 111223333345666666654 4677
Q ss_pred EEECCCCcEEec-CCCCccCCcceEEEEECC---EEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCC
Q 013264 238 VYDVEADEWRML-PEMDEERDECQGVCLEGD---RFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRG 313 (446)
Q Consensus 238 ~yd~~t~~W~~~-~~~~~~r~~~~~~~~~~~---~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~ 313 (446)
+||.....=..+ ......+....++.+..+ .+++.|+.+ ..+..||+.+.+-...- .....
T Consensus 498 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d--------~~v~vwd~~~~~~~~~~-------~~h~~ 562 (694)
T 3dm0_A 498 LWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD--------KTVKVWNLSNCKLRSTL-------AGHTG 562 (694)
T ss_dssp EECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT--------SCEEEEETTTCCEEEEE-------CCCSS
T ss_pred EEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC--------CeEEEEECCCCcEEEEE-------cCCCC
Confidence 888755432222 221111222123333322 355666643 26899999877543321 01122
Q ss_pred ceEEEEecCCCcccEEEEEcCCCCC
Q 013264 314 STATITSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 314 ~~~~~~~~~~~~~~~lyv~GG~~~~ 338 (446)
....+.+.. ++++++.|+.++.
T Consensus 563 ~v~~v~~sp---dg~~l~sg~~Dg~ 584 (694)
T 3dm0_A 563 YVSTVAVSP---DGSLCASGGKDGV 584 (694)
T ss_dssp CEEEEEECT---TSSEEEEEETTSB
T ss_pred CEEEEEEeC---CCCEEEEEeCCCe
Confidence 223333322 1478888887653
No 242
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=49.46 E-value=30 Score=32.93 Aligned_cols=74 Identities=16% Similarity=0.087 Sum_probs=45.8
Q ss_pred eCCEEEEEeCc--CCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc--EEEEEeccCCCCCCCCeEEEE
Q 013264 164 ASRKLLLIGGW--DPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS--TVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 164 ~~~~lyv~GG~--~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~--~iyv~GG~~~~~~~~~~~~~y 239 (446)
-++++||.-+. .+......+.++++|. .+++ .+...+.+..-.++++-.|+ .+|+.-+. .+++.+|
T Consensus 290 ~~~~lyV~~~~~~~~~hk~~~~~V~viD~--~t~k--v~~~i~vg~~~~~lavs~D~~~~ly~tn~~------~~~VsVi 359 (386)
T 3sjl_D 290 ALDRIYLLVDQRDEWRHKTASRFVVVLDA--KTGE--RLAKFEMGHEIDSINVSQDEKPLLYALSTG------DKTLYIH 359 (386)
T ss_dssp TTTEEEEEEEECCTTCTTSCEEEEEEEET--TTCC--EEEEEEEEEEECEEEECSSSSCEEEEEETT------TTEEEEE
T ss_pred CCCeEEEEeccccccccCCCCCEEEEEEC--CCCe--EEEEEECCCCcceEEECCCCCeEEEEEcCC------CCeEEEE
Confidence 47899997431 2222224678999999 5554 44444444444455555554 47776442 2688999
Q ss_pred ECCCCcEE
Q 013264 240 DVEADEWR 247 (446)
Q Consensus 240 d~~t~~W~ 247 (446)
|..+++-.
T Consensus 360 D~~t~k~~ 367 (386)
T 3sjl_D 360 DAESGEEL 367 (386)
T ss_dssp ETTTCCEE
T ss_pred ECCCCcEE
Confidence 99988754
No 243
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=49.37 E-value=1.6e+02 Score=27.00 Aligned_cols=153 Identities=8% Similarity=-0.050 Sum_probs=73.7
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~y 239 (446)
++..-++++.++++... -..+.++|+ .+.+-..... ....-..++.-.|+++.+.++. +.+.++
T Consensus 139 v~fSpDg~~la~as~~~-----d~~i~iwd~--~~~~~~~~~~--~~~~V~~v~fspdg~~l~s~s~-------~~~~~~ 202 (365)
T 4h5i_A 139 VYISREGTVAAIASSKV-----PAIMRIIDP--SDLTEKFEIE--TRGEVKDLHFSTDGKVVAYITG-------SSLEVI 202 (365)
T ss_dssp EEECTTSSCEEEEESCS-----SCEEEEEET--TTTEEEEEEE--CSSCCCEEEECTTSSEEEEECS-------SCEEEE
T ss_pred EEEcCCCCEEEEEECCC-----CCEEEEeEC--CCCcEEEEeC--CCCceEEEEEccCCceEEeccc-------eeEEEE
Confidence 33334666555443211 236889999 6665433321 2222234444445676666642 356788
Q ss_pred ECCCCcEEecCCCCccCCcceEE-EEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEE
Q 013264 240 DVEADEWRMLPEMDEERDECQGV-CLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATI 318 (446)
Q Consensus 240 d~~t~~W~~~~~~~~~r~~~~~~-~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~ 318 (446)
+..++.-..............++ ..-+++.++.++.++.. ...+..+|............ ..........++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~----~~~i~~~~~~~~~~~~~~~~---~~~~~~~~V~~~ 275 (365)
T 4h5i_A 203 STVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGK----GIVLTKISIKSGNTSVLRSK---QVTNRFKGITSM 275 (365)
T ss_dssp ETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSC----CEEEEEEEEETTEEEEEEEE---EEESSCSCEEEE
T ss_pred EeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcc----eeEEeecccccceecceeee---eecCCCCCeEeE
Confidence 87777654322221111111122 33467777777654321 12466777766655433210 111111222233
Q ss_pred EecCCCcccEEEEEcCCCCC
Q 013264 319 TSYRLQQHQWLWFLGKEQQQ 338 (446)
Q Consensus 319 ~~~~~~~~~~lyv~GG~~~~ 338 (446)
.+.. ++++++.|+.++.
T Consensus 276 ~~Sp---dg~~lasgs~D~~ 292 (365)
T 4h5i_A 276 DVDM---KGELAVLASNDNS 292 (365)
T ss_dssp EECT---TSCEEEEEETTSC
T ss_pred EECC---CCCceEEEcCCCE
Confidence 3321 2588888887764
No 244
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=48.74 E-value=2.4e+02 Score=28.89 Aligned_cols=146 Identities=15% Similarity=0.267 Sum_probs=77.3
Q ss_pred eEEEEECCCC--c-EEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCC--CcEEEccCCccC
Q 013264 132 GLTIFNASNG--T-WERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNS--SRWRRVKPMSVA 206 (446)
Q Consensus 132 ~~~~ydp~~~--~-W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t--~~W~~~~~~p~~ 206 (446)
.++.+|..+. . |..+..... .. ...+...++.||+....+. ....++++|. .+ ..|+.+-+-...
T Consensus 295 ~l~~~d~~~~~~~~~~~l~~~~~--~~--~~~~~~dg~~l~~~s~~~~----~~~~l~~~d~--~~~~~~~~~l~~~~~~ 364 (741)
T 1yr2_A 295 TVHVARVTNGKIGPVTALIPDLK--AQ--WDFVDGVGDQLWFVSGDGA----PLKKIVRVDL--SGSTPRFDTVVPESKD 364 (741)
T ss_dssp EEEEEEEETTEECCCEEEECSSS--SC--EEEEEEETTEEEEEECTTC----TTCEEEEEEC--SSSSCEEEEEECCCSS
T ss_pred eEEEEECCCCCCcccEEecCCCC--ce--EEEEeccCCEEEEEECCCC----CCCEEEEEeC--CCCccccEEEecCCCC
Confidence 4556666655 5 666644321 11 1222235777887764322 2457999998 66 578877432221
Q ss_pred ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE-ECC-EEEEE-eCCCCCCCCcc
Q 013264 207 RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL-EGD-RFFVV-SGYGTESQGRF 283 (446)
Q Consensus 207 r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~-~~~-~lyv~-GG~~~~~~~~~ 283 (446)
....+...+ +++++....++ ...++++|...+.-..+. ++..... .+... -++ .|++. .+.. .
T Consensus 365 -~l~~~~~~~-~~lv~~~~~dg----~~~l~~~~~~g~~~~~l~-~~~~~~v-~~~~~s~d~~~l~~~~ss~~------~ 430 (741)
T 1yr2_A 365 -NLESVGIAG-NRLFASYIHDA----KSQVLAFDLDGKPAGAVS-LPGIGSA-SGLSGRPGDRHAYLSFSSFT------Q 430 (741)
T ss_dssp -EEEEEEEEB-TEEEEEEEETT----EEEEEEEETTSCEEEECB-CSSSCEE-EEEECCBTCSCEEEEEEETT------E
T ss_pred -eEEEEEEEC-CEEEEEEEECC----EEEEEEEeCCCCceeecc-CCCCeEE-EEeecCCCCCEEEEEEcCCC------C
Confidence 112233345 78887766543 367888997555444443 2211110 11211 122 34433 2221 3
Q ss_pred cCcEEEEeCCCCceEEcc
Q 013264 284 KPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 284 ~~~v~~yd~~~~~W~~~~ 301 (446)
...++.||+.+++.+.+.
T Consensus 431 P~~i~~~d~~tg~~~~l~ 448 (741)
T 1yr2_A 431 PATVLALDPATAKTTPWE 448 (741)
T ss_dssp EEEEEEEETTTTEEEECS
T ss_pred CCEEEEEECCCCcEEEEe
Confidence 457999999998877664
No 245
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=48.30 E-value=2.4e+02 Score=28.84 Aligned_cols=126 Identities=17% Similarity=0.211 Sum_probs=69.9
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--c-EEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--R-WRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~-W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
.....-+++..++....... ..++++++|. .+. . |+.+..-....... +...+ ++||+....+. ....
T Consensus 272 ~~~~SpDG~~l~~~~~~~~~--~~~~l~~~d~--~~~~~~~~~~l~~~~~~~~~~-~~~dg-~~l~~~s~~~~---~~~~ 342 (741)
T 1yr2_A 272 GASVSSDGRWVVITSSEGTD--PVNTVHVARV--TNGKIGPVTALIPDLKAQWDF-VDGVG-DQLWFVSGDGA---PLKK 342 (741)
T ss_dssp EEEECTTSCEEEEEEECTTC--SCCEEEEEEE--ETTEECCCEEEECSSSSCEEE-EEEET-TEEEEEECTTC---TTCE
T ss_pred EEEECCCCCEEEEEEEccCC--CcceEEEEEC--CCCCCcccEEecCCCCceEEE-EeccC-CEEEEEECCCC---CCCE
Confidence 33344456444443322211 2568999999 666 6 87775433222222 22333 67887765432 2367
Q ss_pred EEEEECCC--CcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 236 AEVYDVEA--DEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 236 ~~~yd~~t--~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
++++|..+ ..|+.+-+-.... ...+...+++|++....++ ...++.+|+..+.-..+.
T Consensus 343 l~~~d~~~~~~~~~~l~~~~~~~--l~~~~~~~~~lv~~~~~dg------~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 343 IVRVDLSGSTPRFDTVVPESKDN--LESVGIAGNRLFASYIHDA------KSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp EEEEECSSSSCEEEEEECCCSSE--EEEEEEEBTEEEEEEEETT------EEEEEEEETTSCEEEECB
T ss_pred EEEEeCCCCccccEEEecCCCCe--EEEEEEECCEEEEEEEECC------EEEEEEEeCCCCceeecc
Confidence 89999888 5798775322211 1234555888888765432 236888887655444443
No 246
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=47.94 E-value=1.5e+02 Score=28.17 Aligned_cols=135 Identities=7% Similarity=0.019 Sum_probs=71.4
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCC-EEEEEeCcCCCCCCccCeEEEEeCcCCCCcE---EEccCCccC
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASR-KLLLIGGWDPITLEPVPDVYVLDMVNNSSRW---RRVKPMSVA 206 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~-~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W---~~~~~~p~~ 206 (446)
..+..+|+..++...+.... .+ ..+.++..++ .||+.....+. ....++.++. .. .+ ..++.+..
T Consensus 159 ~~I~~id~~~~~v~~~~~~~---~~-P~~ia~d~~G~~lyvad~~~~~---~~~~v~~~~~--~g-~~~~~~~l~~~~~- 227 (430)
T 3tc9_A 159 HPTRLIDFEKEYVSTVYSGL---SK-VRTICWTHEADSMIITNDQNNN---DRPNNYILTR--ES-GFKVITELTKGQN- 227 (430)
T ss_dssp EEEEEEETTTTEEEEEECCC---SC-EEEEEECTTSSEEEEEECCSCT---TSEEEEEEEG--GG-TSCSEEEEEECSS-
T ss_pred CcEEEEECCCCEEEEEecCC---CC-cceEEEeCCCCEEEEEeCCCCc---ccceEEEEeC--CC-ceeeeeeeccCCC-
Confidence 35778899888877664422 11 1233333344 49998653321 2335677776 22 23 23333322
Q ss_pred ccceEEEEEC-CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CC-EEEEEeCCCCCCCCcc
Q 013264 207 RSFFACAVVG-ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GD-RFFVVSGYGTESQGRF 283 (446)
Q Consensus 207 r~~~~~~~~~-d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~-~lyv~GG~~~~~~~~~ 283 (446)
-+++++.. ++.||+.--. ...+++||+.+..-..+...+.... ..++++. ++ .||+.--.
T Consensus 228 --p~giavdp~~g~lyv~d~~------~~~V~~~~~~~~~~~~~~~~~~~~~-P~gia~~pdG~~lyv~d~~-------- 290 (430)
T 3tc9_A 228 --CNGAETHPINGELYFNSWN------AGQVFRYDFTTQETTPLFTIQDSGW-EFHIQFHPSGNYAYIVVVN-------- 290 (430)
T ss_dssp --CCCEEECTTTCCEEEEETT------TTEEEEEETTTTEEEEEEECSSSSC-CEEEEECTTSSEEEEEETT--------
T ss_pred --ceEEEEeCCCCEEEEEECC------CCEEEEEECCCCcEEEEEEcCCCCc-ceeEEEcCCCCEEEEEECC--------
Confidence 23444443 4789987431 2579999998776533322221111 1244443 33 59998542
Q ss_pred cCcEEEEeCC
Q 013264 284 KPDAECYDPK 293 (446)
Q Consensus 284 ~~~v~~yd~~ 293 (446)
.+.|++||..
T Consensus 291 ~~~I~~~~~d 300 (430)
T 3tc9_A 291 QHYILRSDYD 300 (430)
T ss_dssp TTEEEEEEEE
T ss_pred CCEEEEEeCC
Confidence 3467776654
No 247
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=45.21 E-value=1.8e+02 Score=26.38 Aligned_cols=24 Identities=13% Similarity=0.180 Sum_probs=16.0
Q ss_pred CcEEEEEeccCCCCCCCCeEEEEECCCCcE
Q 013264 217 ASTVCVAGGHDGQKNALKSAEVYDVEADEW 246 (446)
Q Consensus 217 d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W 246 (446)
+++.++.|+.+ ..+.+||..+.+-
T Consensus 256 ~~~~l~~~~~d------g~i~vwd~~~~~~ 279 (408)
T 4a11_B 256 DGLHLLTVGTD------NRMRLWNSSNGEN 279 (408)
T ss_dssp TSSEEEEEETT------SCEEEEETTTCCB
T ss_pred CCCEEEEecCC------CeEEEEECCCCcc
Confidence 45666666643 4688999887653
No 248
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=44.59 E-value=83 Score=29.68 Aligned_cols=64 Identities=8% Similarity=0.153 Sum_probs=34.0
Q ss_pred cEEEEEeccCCCCCCCCeEEEEECCCCc-EEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 218 STVCVAGGHDGQKNALKSAEVYDVEADE-WRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 218 ~~iyv~GG~~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
+.+++.|+.+ ..+.+||..+.. ...+..+........++++. +..+++.|+.++ .+..||..+
T Consensus 244 ~~~l~s~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg--------~v~vwd~~~ 309 (430)
T 2xyi_A 244 ESLFGSVADD------QKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADK--------TVALWDLRN 309 (430)
T ss_dssp TTEEEEEETT------SEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTS--------EEEEEETTC
T ss_pred CCEEEEEeCC------CeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCC--------eEEEEeCCC
Confidence 5666666643 578999988652 11111111111111233333 234788887543 689999876
Q ss_pred C
Q 013264 295 G 295 (446)
Q Consensus 295 ~ 295 (446)
.
T Consensus 310 ~ 310 (430)
T 2xyi_A 310 L 310 (430)
T ss_dssp T
T ss_pred C
Confidence 3
No 249
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=44.47 E-value=42 Score=29.18 Aligned_cols=20 Identities=15% Similarity=0.280 Sum_probs=16.2
Q ss_pred CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 266 GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 266 ~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
++++|+|-|. ..++||..++
T Consensus 129 ~~k~yfFkG~----------~yw~~d~~~~ 148 (227)
T 3lp9_A 129 GKEVYLFKGD----------QYARIDYGSN 148 (227)
T ss_dssp TTEEEEEETT----------EEEEEETTTT
T ss_pred CCEEEEEECC----------EEEEEeCCCc
Confidence 5899999873 6899998765
No 250
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=43.95 E-value=1.6e+02 Score=25.42 Aligned_cols=60 Identities=7% Similarity=-0.018 Sum_probs=37.8
Q ss_pred CcEEEEEeccCCCCCCCCeEEEEECCCCcEEec----C-CCCcc-----CCcceEEEE--ECCEEEEEeCCCCCCCCccc
Q 013264 217 ASTVCVAGGHDGQKNALKSAEVYDVEADEWRML----P-EMDEE-----RDECQGVCL--EGDRFFVVSGYGTESQGRFK 284 (446)
Q Consensus 217 d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~----~-~~~~~-----r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~ 284 (446)
++++|.+-| +..++||..+++-..- . ..|.. .....++.. .++++|++-|.
T Consensus 127 ~gk~yfFkG--------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~--------- 189 (225)
T 3oyo_A 127 GKEVYLFKG--------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ--------- 189 (225)
T ss_dssp TTEEEEEET--------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT---------
T ss_pred CCcEEEEeC--------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC---------
Confidence 489999977 5779999777655431 1 12211 111134444 37899999873
Q ss_pred CcEEEEeCCC
Q 013264 285 PDAECYDPKT 294 (446)
Q Consensus 285 ~~v~~yd~~~ 294 (446)
..+.||..+
T Consensus 190 -~ywr~d~~~ 198 (225)
T 3oyo_A 190 -NYVRIDFTP 198 (225)
T ss_dssp -EEEEEECCT
T ss_pred -EEEEEeCCc
Confidence 678999873
No 251
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=43.83 E-value=1.7e+02 Score=25.80 Aligned_cols=133 Identities=10% Similarity=0.078 Sum_probs=64.7
Q ss_pred eEEEEECCCCc----EEecCCCCCCCCccceEEEEeeCCE-EEEEeCcCCCCCCccCeEEEEeC-cCCCCcEEEccCCcc
Q 013264 132 GLTIFNASNGT----WERIRPHVGRIPMFCQCVAVPASRK-LLLIGGWDPITLEPVPDVYVLDM-VNNSSRWRRVKPMSV 205 (446)
Q Consensus 132 ~~~~ydp~~~~----W~~l~~~~~~~p~~~~~~~~~~~~~-lyv~GG~~~~~~~~~~~v~~~d~-~~~t~~W~~~~~~p~ 205 (446)
.+.+||..+.. -..+... .....+.+...++. +++.|+.++ .+.+||. .. ..-..+.....
T Consensus 34 ~v~iw~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~~l~~~~~dg-------~i~~wd~~~~--~~~~~~~~~~~ 100 (342)
T 1yfq_A 34 SLTVYKFDIQAKNVDLLQSLRY----KHPLLCCNFIDNTDLQIYVGTVQG-------EILKVDLIGS--PSFQALTNNEA 100 (342)
T ss_dssp EEEEEEEETTTTEEEEEEEEEC----SSCEEEEEEEESSSEEEEEEETTS-------CEEEECSSSS--SSEEECBSCCC
T ss_pred eEEEEEeCCCCccccceeeeec----CCceEEEEECCCCCcEEEEEcCCC-------eEEEEEeccC--CceEeccccCC
Confidence 35666666554 3322211 12223344434666 677777543 5888887 43 33344433111
Q ss_pred CccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc-------EEecCCCCccCCcceEEEEECCEEEEEeCCCCC
Q 013264 206 ARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE-------WRMLPEMDEERDECQGVCLEGDRFFVVSGYGTE 278 (446)
Q Consensus 206 ~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~-------W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~ 278 (446)
...-.+++... +..++.|+.+ ..+.+||..+.. .+.+..+.... ...++.+..+. ++.|+.+
T Consensus 101 ~~~v~~l~~~~-~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~-l~~~~~d-- 169 (342)
T 1yfq_A 101 NLGICRICKYG-DDKLIAASWD------GLIEVIDPRNYGDGVIAVKNLNSNNTKVKN-KIFTMDTNSSR-LIVGMNN-- 169 (342)
T ss_dssp CSCEEEEEEET-TTEEEEEETT------SEEEEECHHHHTTBCEEEEESCSSSSSSCC-CEEEEEECSSE-EEEEEST--
T ss_pred CCceEEEEeCC-CCEEEEEcCC------CeEEEEcccccccccccccCCeeeEEeeCC-ceEEEEecCCc-EEEEeCC--
Confidence 22222333333 3455566543 467888876400 22222232221 12455555666 4455432
Q ss_pred CCCcccCcEEEEeCCC
Q 013264 279 SQGRFKPDAECYDPKT 294 (446)
Q Consensus 279 ~~~~~~~~v~~yd~~~ 294 (446)
..+..||..+
T Consensus 170 ------~~i~i~d~~~ 179 (342)
T 1yfq_A 170 ------SQVQWFRLPL 179 (342)
T ss_dssp ------TEEEEEESSC
T ss_pred ------CeEEEEECCc
Confidence 3689999987
No 252
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=43.79 E-value=1e+02 Score=30.41 Aligned_cols=133 Identities=10% Similarity=0.005 Sum_probs=69.5
Q ss_pred EEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEE
Q 013264 134 TIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACA 213 (446)
Q Consensus 134 ~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~ 213 (446)
.+||..+++-..+...+ . ...+..-+|+..++++.+.. ....++++|+ .+.+.+.+..-... ....+
T Consensus 135 ~l~d~~~g~~~~l~~~~----~--~~~~~spDG~~la~~~~~~~---~~~~i~~~d~--~~g~~~~l~~~~~~--~~~~~ 201 (582)
T 3o4h_A 135 ALYALDGGGLRELARLP----G--FGFVSDIRGDLIAGLGFFGG---GRVSLFTSNL--SSGGLRVFDSGEGS--FSSAS 201 (582)
T ss_dssp EEEEEETTEEEEEEEES----S--CEEEEEEETTEEEEEEEEET---TEEEEEEEET--TTCCCEEECCSSCE--EEEEE
T ss_pred eEEEccCCcEEEeecCC----C--ceEEECCCCCEEEEEEEcCC---CCeEEEEEcC--CCCCceEeecCCCc--cccce
Confidence 36677666655554333 1 23333345665555543321 1246999999 77888877443221 12333
Q ss_pred EECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceE-------EEEECCEEEEEeCCCCCCCCcccCc
Q 013264 214 VVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQG-------VCLEGDRFFVVSGYGTESQGRFKPD 286 (446)
Q Consensus 214 ~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~-------~~~~~~~lyv~GG~~~~~~~~~~~~ 286 (446)
.-.||+.++.+..++ ...++++|..+++.+.+......... .. ...-++++|+.+..+ ..
T Consensus 202 ~SpDG~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~spdg~~~~~~~~~--------g~ 268 (582)
T 3o4h_A 202 ISPGMKVTAGLETAR----EARLVTVDPRDGSVEDLELPSKDFSS-YRPTAITWLGYLPDGRLAVVARRE--------GR 268 (582)
T ss_dssp ECTTSCEEEEEECSS----CEEEEEECTTTCCEEECCCSCSHHHH-HCCSEEEEEEECTTSCEEEEEEET--------TE
T ss_pred ECCCCCEEEEccCCC----eeEEEEEcCCCCcEEEccCCCcChhh-hhhccccceeEcCCCcEEEEEEcC--------Cc
Confidence 333565544433222 25899999999888743332211111 01 022355777766543 25
Q ss_pred EEEEeC
Q 013264 287 AECYDP 292 (446)
Q Consensus 287 v~~yd~ 292 (446)
+..|+.
T Consensus 269 ~~l~~~ 274 (582)
T 3o4h_A 269 SAVFID 274 (582)
T ss_dssp EEEEET
T ss_pred EEEEEE
Confidence 677777
No 253
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=43.72 E-value=2.8e+02 Score=28.19 Aligned_cols=104 Identities=16% Similarity=0.113 Sum_probs=61.7
Q ss_pred cCeEEEEeCcCCCC--cEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCC---cEEecCCCCccC
Q 013264 182 VPDVYVLDMVNNSS--RWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEAD---EWRMLPEMDEER 256 (446)
Q Consensus 182 ~~~v~~~d~~~~t~--~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~r 256 (446)
.++++++|. .+. .|+.+..-...... .....+ ++||+....+.. ...+..+|..+. .|+.+.+-...
T Consensus 258 ~~~i~~~d~--~~~~~~~~~l~~~~~~~~~-~~~~~g-~~l~~~t~~~~~---~~~l~~~d~~~~~~~~~~~l~~~~~~- 329 (693)
T 3iuj_A 258 GNRLYVKDL--SQENAPLLTVQGDLDADVS-LVDNKG-STLYLLTNRDAP---NRRLVTVDAANPGPAHWRDLIPERQQ- 329 (693)
T ss_dssp CCEEEEEET--TSTTCCCEEEECSSSSCEE-EEEEET-TEEEEEECTTCT---TCEEEEEETTSCCGGGCEEEECCCSS-
T ss_pred CcEEEEEEC--CCCCCceEEEeCCCCceEE-EEeccC-CEEEEEECCCCC---CCEEEEEeCCCCCccccEEEecCCCC-
Confidence 368999998 544 67776543222211 123344 799998765432 368899998763 48876432221
Q ss_pred CcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 257 DECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 257 ~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
. .+....++.|++....++ ...++.+|+..+....+.
T Consensus 330 -~-~~~s~~g~~lv~~~~~~g------~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 330 -V-LTVHSGSGYLFAEYMVDA------TARVEQFDYEGKRVREVA 366 (693)
T ss_dssp -C-EEEEEETTEEEEEEEETT------EEEEEEECTTSCEEEEEC
T ss_pred -E-EEEEEECCEEEEEEEECC------eeEEEEEECCCCeeEEee
Confidence 1 245556777766543322 236899999876665554
No 254
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=43.68 E-value=1.8e+02 Score=25.93 Aligned_cols=103 Identities=9% Similarity=-0.011 Sum_probs=55.3
Q ss_pred cCeEEEEeCcCCCCcE-EEccCCccCccceEEEEECCcEEEEEeccCCCCC--C-CCeEEEEECCCCcEEecCCCCccCC
Q 013264 182 VPDVYVLDMVNNSSRW-RRVKPMSVARSFFACAVVGASTVCVAGGHDGQKN--A-LKSAEVYDVEADEWRMLPEMDEERD 257 (446)
Q Consensus 182 ~~~v~~~d~~~~t~~W-~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~--~-~~~~~~yd~~t~~W~~~~~~~~~r~ 257 (446)
...++++|+ .+.+. +.+.. + .....+...|+ +++.+....... . ...++.+| +++++.+..- .
T Consensus 151 ~~~l~~~d~--~~~~~~~~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~----~ 217 (347)
T 2gop_A 151 KTTFWIFDT--ESEEVIEEFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEK----V 217 (347)
T ss_dssp EEEEEEEET--TTTEEEEEEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEE----E
T ss_pred cceEEEEEC--CCCeEEeeecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccC----c
Confidence 357899999 77776 55554 3 33344444556 665554432111 1 35788888 7777766432 1
Q ss_pred cceEEEEECCE-EEEEeCCCCCCCCcccCcEEEEeCCCCceEEcc
Q 013264 258 ECQGVCLEGDR-FFVVSGYGTESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 258 ~~~~~~~~~~~-lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
..... .-+++ |++.+.... ........++.+| ++++..+.
T Consensus 218 ~~~~~-spdg~~l~~~~~~~~-~~~~~~~~l~~~d--~~~~~~l~ 258 (347)
T 2gop_A 218 SFYAV-DSDGERILLYGKPEK-KYMSEHNKLYIYD--GKEVMGIL 258 (347)
T ss_dssp SEEEE-EECSSCEEEEECCSS-SCCCSSCEEEEEC--SSCEEESS
T ss_pred ceeeE-CCCCCEEEEEEcccc-CCccccceEEEEC--CCceEecc
Confidence 11223 44554 544443221 1011235789999 66776664
No 255
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=43.34 E-value=2.3e+02 Score=27.24 Aligned_cols=19 Identities=11% Similarity=-0.111 Sum_probs=14.4
Q ss_pred cceEEEEECCcEEEEEecc
Q 013264 208 SFFACAVVGASTVCVAGGH 226 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~ 226 (446)
..|+++...+++||..|-.
T Consensus 213 ~~hs~alt~~G~v~~wG~n 231 (473)
T 3of7_A 213 KDHILFLDEEGMVFAWGNG 231 (473)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEeCCCeEEEEeCC
Confidence 3577777777899999854
No 256
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=42.81 E-value=2.3e+02 Score=27.08 Aligned_cols=133 Identities=13% Similarity=0.183 Sum_probs=74.6
Q ss_pred CCCcEEE--ccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC-----CC-cEEecCCCCccCCcceEEEE
Q 013264 193 NSSRWRR--VKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE-----AD-EWRMLPEMDEERDECQGVCL 264 (446)
Q Consensus 193 ~t~~W~~--~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~-----t~-~W~~~~~~~~~r~~~~~~~~ 264 (446)
....|++ ++..|..-.-|+.+.++ +.-|++|=.+++-..-.--..|-+. .. .=+.++.--.+-..-.++-.
T Consensus 268 ~~spW~~t~L~~i~~vTe~HSFa~i~-~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~sey~~~AsEPCvky 346 (670)
T 3ju4_A 268 HKSPWRKTDLGLIPSVTEVHSFATID-NNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPSEYEPDASEPCIKY 346 (670)
T ss_dssp TTSCCEEEECCSCTTCSEEEEEEECS-SSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCGGGCTTEEEEEEEE
T ss_pred ccCCceecccccccceeeeeeeeEec-CCceEEEeccCCCCcceeeEEEecccccCCcceeeeechhhhccccccchhhh
Confidence 3445654 34455555668888888 4556887665543221222233221 11 11222221111111256678
Q ss_pred ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 265 EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 265 ~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
++++||+...-.... ..-+.++.-+..-.+|+.+.. |-........-+.+++ .||+||-...
T Consensus 347 YdgvLyLtTRgt~~~--~~GS~L~rs~d~Gq~w~slrf----p~nvHhtnlPFakvgD-----~l~mFgsERA 408 (670)
T 3ju4_A 347 YDGVLYLITRGTRGD--RLGSSLHRSRDIGQTWESLRF----PHNVHHTTLPFAKVGD-----DLIMFGSERA 408 (670)
T ss_dssp ETTEEEEEEEESCTT--SCCCEEEEESSTTSSCEEEEC----TTCCCSSCCCEEEETT-----EEEEEEECSS
T ss_pred hCCEEEEEecCcCCC--CCcceeeeecccCCchhheec----cccccccCCCcceeCC-----EEEEEecccc
Confidence 899999985422211 234578888888889998874 3334455556677777 9999986543
No 257
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=42.71 E-value=1.4e+02 Score=30.80 Aligned_cols=135 Identities=10% Similarity=0.013 Sum_probs=70.3
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc--CCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK--PMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~--~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.||+.-. ..+.+.++|+ ....-+.+. .+..|+ ++++- .++.||+.--. ....+++++
T Consensus 463 ~~g~LY~tD~-------~~~~I~v~d~--dg~~~~~l~~~~~~~P~---giavDp~~g~ly~td~~-----~~~~I~~~~ 525 (699)
T 1n7d_A 463 IHSNIYWTDS-------VLGTVSVADT--KGVKRKTLFREQGSKPR---AIVVDPVHGFMYWTDWG-----TPAKIKKGG 525 (699)
T ss_dssp SSSBCEECCT-------TTSCEEEEBS--SSCCEEEECCCSSCCCC---CEECCSSSSCCEECCCS-----SSCCEEBCC
T ss_pred eCCcEEEEec-------cCCeEEEEec--CCCceEEEEeCCCCCcc---eEEEccCCCcEEEcccC-----CCCeEEEEe
Confidence 4678888632 1346899998 555444432 223332 23332 12788886411 125778887
Q ss_pred CCCCcEEecC--CCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCCCceE
Q 013264 241 VEADEWRMLP--EMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTA 316 (446)
Q Consensus 241 ~~t~~W~~~~--~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~ 316 (446)
+....-+.+. .+..| .++++. +++||+.-.. .+.|++||+....-+.+... ...++ ...+
T Consensus 526 ~dG~~~~~l~~~~l~~P----nGlavd~~~~~LY~aD~~--------~~~I~~~d~dG~~~~~~~~~-~~~~~---~P~g 589 (699)
T 1n7d_A 526 LNGVDIYSLVTENIQWP----NGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED-EKRLA---HPFS 589 (699)
T ss_dssp SSSCCCCEESCSSCSSC----CCEEECTTTCCEEEEETT--------TTEEEEECSSSSCCEEECCC-SSSCS---SCCC
T ss_pred CCCCCeeEEEeCCCCCc----cEEEEeccCCEEEEEecC--------CCeEEEEccCCCceEEEEec-CCcCC---CceE
Confidence 7544332221 22222 244553 6799997542 34799999975444444311 00111 2233
Q ss_pred EEEecCCCcccEEEEEcCCC
Q 013264 317 TITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 317 ~~~~~~~~~~~~lyv~GG~~ 336 (446)
+++..+ .||+.-...
T Consensus 590 lavd~~-----~lywtd~~~ 604 (699)
T 1n7d_A 590 LAVFED-----KVFWTDIIN 604 (699)
T ss_dssp CEEETT-----EEEEECSTT
T ss_pred eEEECC-----EEEEEeCCC
Confidence 344454 899887443
No 258
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=42.26 E-value=2.1e+02 Score=26.47 Aligned_cols=70 Identities=10% Similarity=0.131 Sum_probs=38.7
Q ss_pred cEEEEEeccCC---CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCE--EEEEeCCCCCCCCcccCcEEEEe
Q 013264 218 STVCVAGGHDG---QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDR--FFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 218 ~~iyv~GG~~~---~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~--lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+++||...... .....+.+.++|..+.+=. ..++.+... .++++. +++ +|+.... .+.|.+||
T Consensus 279 ~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv--~~i~~g~~p-~~i~~s~Dg~~~l~v~~~~--------~~~V~ViD 347 (373)
T 2mad_H 279 DGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTS--SQISLGHDV-DAISVAQDGGPDLYALSAG--------TEVLHIYD 347 (373)
T ss_pred CEEEEEeccCCcccccCCCCeEEEEECCCCEEE--EEEECCCCc-CeEEECCCCCeEEEEEcCC--------CCeEEEEE
Confidence 78999764221 1112468999998876542 222322222 334333 344 5554321 24799999
Q ss_pred CCCCceE
Q 013264 292 PKTGSWS 298 (446)
Q Consensus 292 ~~~~~W~ 298 (446)
.++.+=.
T Consensus 348 ~~t~~vv 354 (373)
T 2mad_H 348 AGAGDQD 354 (373)
T ss_pred CCCCCEE
Confidence 9886543
No 259
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=42.03 E-value=1.3e+02 Score=30.17 Aligned_cols=71 Identities=17% Similarity=0.316 Sum_probs=45.9
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCC-----cceEEEEECCEEEEEeCCCCCCCCcccC
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERD-----ECQGVCLEGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~-----~~~~~~~~~~~lyv~GG~~~~~~~~~~~ 285 (446)
++.+ ++||+.... ..+..+|..|. .|+.-...+.... ...+.++.+++||+... ..
T Consensus 65 ~v~~-g~vyv~~~~-------~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~~t~---------dg 127 (582)
T 1flg_A 65 IVSD-GVIYVTASY-------SRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFFGTL---------DA 127 (582)
T ss_dssp EEET-TEEEEEETT-------TEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEEEET---------TT
T ss_pred EEEC-CEEEEEcCC-------CCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEEEeC---------CC
Confidence 4556 899998653 24889998776 4886543332110 01344678999988542 23
Q ss_pred cEEEEeCCCCc--eEEc
Q 013264 286 DAECYDPKTGS--WSKF 300 (446)
Q Consensus 286 ~v~~yd~~~~~--W~~~ 300 (446)
.++++|.++++ |+.-
T Consensus 128 ~l~AlD~~TG~~~W~~~ 144 (582)
T 1flg_A 128 SVVALNKNTGKVVWKKK 144 (582)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred EEEEEECCCCCEEeeec
Confidence 79999998884 8753
No 260
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=41.88 E-value=2.2e+02 Score=26.55 Aligned_cols=117 Identities=9% Similarity=0.075 Sum_probs=64.5
Q ss_pred CCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcE-EEccC--CccC-ccceEEEEEC-CcEEEEEecc
Q 013264 153 IPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRW-RRVKP--MSVA-RSFFACAVVG-ASTVCVAGGH 226 (446)
Q Consensus 153 ~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W-~~~~~--~p~~-r~~~~~~~~~-d~~iyv~GG~ 226 (446)
+|....++... .++++|+|-|. .+|+|+.......+ +.+.. +|.. ..--++.... ++++|++-|
T Consensus 223 LP~~iDAa~~~~~~g~~~fFkg~---------~yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG- 292 (365)
T 3ba0_A 223 LPSGIEAAYEIEARNQVFLFKDD---------KYWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVD- 292 (365)
T ss_dssp CCSSCCEEEEEGGGTEEEEEETT---------EEEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEET-
T ss_pred CCCCccEEEEecCCCEEEEEeCC---------EEEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEEC-
Confidence 34333444432 37999999652 57888762111112 22332 2221 1122333333 379999966
Q ss_pred CCCCCCCCeEEEEECCCCcEEec---------CCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc
Q 013264 227 DGQKNALKSAEVYDVEADEWRML---------PEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS 296 (446)
Q Consensus 227 ~~~~~~~~~~~~yd~~t~~W~~~---------~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~ 296 (446)
+..++||..+++-..- +.+|.. ..++... ++++|+|-|. ..+.||..+.+
T Consensus 293 -------~~yw~yd~~~~~v~~gyPk~I~~~f~g~p~~---iDaA~~~~~g~~YfFkg~----------~ywr~d~~~~~ 352 (365)
T 3ba0_A 293 -------NQYWRYDERRQMMDPGYPKLITKNFQGIGPK---IDAVFYSKNKYYYFFQGS----------NQFEYDFLLQR 352 (365)
T ss_dssp -------TEEEEEETTTTEECSSCCCCHHHHSTTCCSS---CSEEEEETTTEEEEEETT----------EEEEEETTTTE
T ss_pred -------CEEEEEeCCcceecCCCCcchhhcCCCCCCc---cceeeEecCCcEEEEeCC----------EEEEEECCccE
Confidence 5779999876542210 122221 1344444 8899999773 68999998876
Q ss_pred eEE
Q 013264 297 WSK 299 (446)
Q Consensus 297 W~~ 299 (446)
-..
T Consensus 353 v~~ 355 (365)
T 3ba0_A 353 ITK 355 (365)
T ss_dssp EEE
T ss_pred Eec
Confidence 544
No 261
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=41.84 E-value=2.2e+02 Score=26.47 Aligned_cols=130 Identities=9% Similarity=-0.014 Sum_probs=65.4
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCc-CCC---------CCCccCeEEEEeCcCCCCcEEEc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGW-DPI---------TLEPVPDVYVLDMVNNSSRWRRV 200 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~-~~~---------~~~~~~~v~~~d~~~~t~~W~~~ 200 (446)
..++.+|+..+....+.......-....-.++..++.+|+-+.. -.. .......+++||+ . +.+.+
T Consensus 141 ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~--~~~~~ 216 (355)
T 3sre_A 141 VEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--N--DVRVV 216 (355)
T ss_dssp EEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--T--CCEEE
T ss_pred EEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--C--eEEEe
Confidence 34566777777666554444311122344555578898886532 110 0113467999999 4 33333
Q ss_pred -cCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeEEEEECCC-CcEEecCCCCccCCcceEEEEE--CCEEEEEeC
Q 013264 201 -KPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSAEVYDVEA-DEWRMLPEMDEERDECQGVCLE--GDRFFVVSG 274 (446)
Q Consensus 201 -~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG 274 (446)
..+.. .-+.+.-.| ..+||.-.. ...+++||... ++.+.......+. ..-++++. +|.||+..+
T Consensus 217 ~~~l~~---pNGia~spDg~~lYvadt~------~~~I~~~~~~~~g~l~~~~~~~~~g-~PDGi~vD~e~G~lwva~~ 285 (355)
T 3sre_A 217 AEGFDF---ANGINISPDGKYVYIAELL------AHKIHVYEKHANWTLTPLRVLSFDT-LVDNISVDPVTGDLWVGCH 285 (355)
T ss_dssp EEEESS---EEEEEECTTSSEEEEEEGG------GTEEEEEEECTTSCEEEEEEEECSS-EEEEEEECTTTCCEEEEEE
T ss_pred ecCCcc---cCcceECCCCCEEEEEeCC------CCeEEEEEECCCCcEecCEEEeCCC-CCceEEEeCCCCcEEEEec
Confidence 22221 123444334 478887432 26788998753 2333211111111 11345555 378999554
No 262
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=41.73 E-value=1.7e+02 Score=25.32 Aligned_cols=56 Identities=14% Similarity=0.241 Sum_probs=34.5
Q ss_pred eEEEEeCcCCCCcEEEccCCccCccc-eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEE
Q 013264 184 DVYVLDMVNNSSRWRRVKPMSVARSF-FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWR 247 (446)
Q Consensus 184 ~v~~~d~~~~t~~W~~~~~~p~~r~~-~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~ 247 (446)
.+.++|. .+.+-.+.-.+...... .+++...+++..+.|+.+ ..+.+||..+++-.
T Consensus 46 tV~iWd~--~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~D------g~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 46 SVYLWSA--SSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSS------AEVQLWDVQQQKRL 102 (318)
T ss_dssp EEEEEET--TTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETT------SEEEEEETTTTEEE
T ss_pred EEEEEEC--CCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECC------CcEEEeecCCceeE
Confidence 6889999 77776554333322222 233344456777777754 47889999887643
No 263
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=41.15 E-value=1.7e+02 Score=25.03 Aligned_cols=137 Identities=8% Similarity=0.101 Sum_probs=70.0
Q ss_pred eEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc-E--EEc----cCCccCccceEEEEE-CCcEEEEEeccCCC
Q 013264 158 QCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR-W--RRV----KPMSVARSFFACAVV-GASTVCVAGGHDGQ 229 (446)
Q Consensus 158 ~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~-W--~~~----~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~ 229 (446)
.+++. ..+++|+|-|. .+|+++. .... . ..+ +.+|. ... |+... .++++|++-|
T Consensus 34 DAi~~-~~g~~~fFkg~---------~~Wr~~~--~~~~~~~P~~I~~~wp~lp~-~ID-AA~~~~~~~k~yfFkG---- 95 (218)
T 1gen_A 34 DGIAQ-IRGEIFFFKDR---------FIWRTVT--PRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG---- 95 (218)
T ss_dssp SEEEE-ETTEEEEEETT---------EEEEESS--TTSCCEEEEEGGGTCTTSCS-CCS-EEEEETTTTEEEEEET----
T ss_pred eEEEe-CCCcEEEEECC---------EEEEEeC--CCCccCCCEEHHHhcCCCCC-Ccc-EEEEECCCCEEEEEeC----
Confidence 34443 69999999663 4666655 2211 1 111 22332 222 22222 2379999976
Q ss_pred CCCCCeEEEEECCCCcEEecCC---------CCccCCcceEEEE--ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceE
Q 013264 230 KNALKSAEVYDVEADEWRMLPE---------MDEERDECQGVCL--EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWS 298 (446)
Q Consensus 230 ~~~~~~~~~yd~~t~~W~~~~~---------~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~ 298 (446)
+..|+||.. +..+. +|.......++.. .++++|+|-|. ..+.||..+++=.
T Consensus 96 ----~~yW~y~~~----~~~~gyPk~I~~~g~p~~~~~IDAAf~~~~~g~~YfFkG~----------~ywr~d~~~~~v~ 157 (218)
T 1gen_A 96 ----NEYWIYSAS----TLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKKKMD 157 (218)
T ss_dssp ----TEEEEEETT----EECTTCSEEGGGGTCCTTCCCCSEEEEETTTTEEEEEETT----------EEEEEETTTTEEC
T ss_pred ----CEEEEEcCc----cccCCCCccHhhcCCCCCcCCccEEEEEcCCCeEEEEECC----------EEEEEECcccccc
Confidence 577899842 22221 1211111133443 36899999773 6889998776422
Q ss_pred -----EcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 299 -----KFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 299 -----~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
.+...+++ .+..-.++....+ ++.+|.|-|..
T Consensus 158 ~gyPr~i~~~w~g---~p~~idaAf~~~~---~g~~YfFkg~~ 194 (218)
T 1gen_A 158 PGFPKLIADAWNA---IPDNLDAVVDLQG---GGHSYFFKGAY 194 (218)
T ss_dssp SSCCEEHHHHSSS---CCSSCSEEEECTT---TCEEEEEETTE
T ss_pred CCCCcchhhccCC---CCCCCCEEEEEcC---CCcEEEEECCE
Confidence 11111221 2333334444441 24999997753
No 264
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=40.76 E-value=3e+02 Score=27.72 Aligned_cols=103 Identities=16% Similarity=0.406 Sum_probs=53.2
Q ss_pred EEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc
Q 013264 167 KLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE 245 (446)
Q Consensus 167 ~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 245 (446)
.+++.|+.++ .+.+||. .+.+-... +....... +++...++++++.|+.+ ..+.+||..+.+
T Consensus 532 ~~l~s~s~d~-------~v~vwd~--~~~~~~~~--~~~h~~~v~~v~~spdg~~l~sg~~D------g~i~iwd~~~~~ 594 (694)
T 3dm0_A 532 PTIVSASWDK-------TVKVWNL--SNCKLRST--LAGHTGYVSTVAVSPDGSLCASGGKD------GVVLLWDLAEGK 594 (694)
T ss_dssp CEEEEEETTS-------CEEEEET--TTCCEEEE--ECCCSSCEEEEEECTTSSEEEEEETT------SBCEEEETTTTE
T ss_pred ceEEEEeCCC-------eEEEEEC--CCCcEEEE--EcCCCCCEEEEEEeCCCCEEEEEeCC------CeEEEEECCCCc
Confidence 3455555432 5888898 55543321 11111122 23333346777777754 467889988775
Q ss_pred EEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 246 WRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 246 W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
-.. .+..... ..+++...+..++.++.+ +.+..||.++++-
T Consensus 595 ~~~--~~~~~~~-v~~~~~sp~~~~l~~~~~--------~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 595 KLY--SLEANSV-IHALCFSPNRYWLCAATE--------HGIKIWDLESKSI 635 (694)
T ss_dssp EEE--CCBCSSC-EEEEEECSSSSEEEEEET--------TEEEEEETTTTEE
T ss_pred eEE--EecCCCc-EEEEEEcCCCcEEEEEcC--------CCEEEEECCCCCC
Confidence 332 2222111 234444444444444422 2588999988754
No 265
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=40.29 E-value=2.6e+02 Score=26.97 Aligned_cols=108 Identities=10% Similarity=0.131 Sum_probs=54.1
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA 243 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t 243 (446)
.+++.++.++.+ ..+.+||. ....-..+.... ..-.+++...|+++.+.|+.+ ..+.+||...
T Consensus 436 ~d~~~l~~~~~d-------~~v~~w~~--~~~~~~~~~~~~--~~v~~~~~spd~~~las~~~d------~~i~iw~~~~ 498 (577)
T 2ymu_A 436 PDDQTIASASDD-------KTVKLWNR--NGQLLQTLTGHS--SSVRGVAFSPDGQTIASASDD------KTVKLWNRNG 498 (577)
T ss_dssp TTSSEEEEEETT-------SEEEEEET--TSCEEEEEECCS--SCEEEEEECTTSCEEEEEETT------SEEEEEETTS
T ss_pred CCCCEEEEEcCC-------CEEEEEEC--CCCEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCC------CEEEEEcCCC
Confidence 456666666643 25778887 444444332211 112233333457777777643 4678888644
Q ss_pred CcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEE
Q 013264 244 DEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSK 299 (446)
Q Consensus 244 ~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~ 299 (446)
..-..+..-. ....++++. ++++.+.|+.++ .+..||.....-..
T Consensus 499 ~~~~~~~~h~---~~v~~l~~s~dg~~l~s~~~dg--------~v~lwd~~~~~~~~ 544 (577)
T 2ymu_A 499 QLLQTLTGHS---SSVRGVAFSPDGQTIASASDDK--------TVKLWNRNGQLLQT 544 (577)
T ss_dssp CEEEEEECCS---SCEEEEEECTTSSCEEEEETTS--------EEEEECTTSCEEEE
T ss_pred CEEEEEeCCC---CCEEEEEEcCCCCEEEEEECcC--------EEEEEeCCCCEEEE
Confidence 3222222111 111233332 556666666432 58889865443333
No 266
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=40.22 E-value=1.7e+02 Score=27.27 Aligned_cols=18 Identities=17% Similarity=0.047 Sum_probs=14.2
Q ss_pred ceEEEEECCcEEEEEecc
Q 013264 209 FFACAVVGASTVCVAGGH 226 (446)
Q Consensus 209 ~~~~~~~~d~~iyv~GG~ 226 (446)
.|+++...+++||..|-.
T Consensus 223 ~~t~~l~~~G~v~~wG~n 240 (389)
T 3kci_A 223 AQTLCLTDDDTVWSWGDG 240 (389)
T ss_dssp CEEEEEETTTEEEEEECC
T ss_pred cEEEEEccCCEEEEEeCC
Confidence 577777777999999853
No 267
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=39.99 E-value=2e+02 Score=25.51 Aligned_cols=134 Identities=10% Similarity=0.141 Sum_probs=65.1
Q ss_pred eEEEEECCCCcEEe-cCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce
Q 013264 132 GLTIFNASNGTWER-IRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~-l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~ 210 (446)
.+.+||..+++-.. +..- .....++....++.+++.|+.++ .+.+||. ....-..+..-.. .-.
T Consensus 88 ~v~~wd~~~~~~~~~~~~h----~~~v~~~~~~~~~~~l~s~s~D~-------~i~vwd~--~~~~~~~~~~h~~--~v~ 152 (319)
T 3frx_A 88 TLRLWDVATGETYQRFVGH----KSDVMSVDIDKKASMIISGSRDK-------TIKVWTI--KGQCLATLLGHND--WVS 152 (319)
T ss_dssp EEEEEETTTTEEEEEEECC----SSCEEEEEECTTSCEEEEEETTS-------CEEEEET--TSCEEEEECCCSS--CEE
T ss_pred EEEEEECCCCCeeEEEccC----CCcEEEEEEcCCCCEEEEEeCCC-------eEEEEEC--CCCeEEEEeccCC--cEE
Confidence 46678877765322 2111 11122333334667777777543 4778888 5443332221110 111
Q ss_pred EEEEEC------CcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcc
Q 013264 211 ACAVVG------ASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 211 ~~~~~~------d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~ 283 (446)
.+.... ++.+++.|+.+ ..+.+||..+.+-... +........++++. ++++++.|+.++
T Consensus 153 ~~~~~~~~~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~~~dg------ 218 (319)
T 3frx_A 153 QVRVVPNEKADDDSVTIISAGND------KMVKAWNLNQFQIEAD--FIGHNSNINTLTASPDGTLIASAGKDG------ 218 (319)
T ss_dssp EEEECCC------CCEEEEEETT------SCEEEEETTTTEEEEE--ECCCCSCEEEEEECTTSSEEEEEETTC------
T ss_pred EEEEccCCCCCCCccEEEEEeCC------CEEEEEECCcchhhee--ecCCCCcEEEEEEcCCCCEEEEEeCCC------
Confidence 112211 12355555543 4678899876543321 11111111233333 556777777543
Q ss_pred cCcEEEEeCCCCc
Q 013264 284 KPDAECYDPKTGS 296 (446)
Q Consensus 284 ~~~v~~yd~~~~~ 296 (446)
.+..||..+.+
T Consensus 219 --~i~iwd~~~~~ 229 (319)
T 3frx_A 219 --EIMLWNLAAKK 229 (319)
T ss_dssp --EEEEEETTTTE
T ss_pred --eEEEEECCCCc
Confidence 68999998764
No 268
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=39.80 E-value=1.5e+02 Score=26.04 Aligned_cols=91 Identities=13% Similarity=0.197 Sum_probs=46.2
Q ss_pred EEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC-CCcEEecCCCCccCCcceEEE
Q 013264 185 VYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE-ADEWRMLPEMDEERDECQGVC 263 (446)
Q Consensus 185 v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~r~~~~~~~ 263 (446)
++.||+. ....|..... ... ....++.+ +.||+... -..+..||+. ...|+...+.+ .. .+.+
T Consensus 80 l~~~d~~-g~~~~~~~~~--~~~-~~~~~~~~-~~l~v~t~-------~~~l~~~d~~g~~~~~~~~~~~--~~--~~~~ 143 (330)
T 3hxj_A 80 VYAINPD-GTEKWRFDTK--KAI-VSDFTIFE-DILYVTSM-------DGHLYAINTDGTEKWRFKTKKA--IY--ATPI 143 (330)
T ss_dssp EEEECCC-GGGGGGSCC--------CCEEEET-TEEEEECT-------TSEEEEECTTSCEEEEEECSSC--CC--SCCE
T ss_pred EEEECCC-CcEEEEEECC--CCc-ccCceEEC-CEEEEEec-------CCEEEEEcCCCCEEEEEcCCCc--ee--eeeE
Confidence 8899982 2334543221 111 11122335 78887532 1467889987 34576543222 11 2223
Q ss_pred EE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCC-ceEEc
Q 013264 264 LE-GDRFFVVSGYGTESQGRFKPDAECYDPKTG-SWSKF 300 (446)
Q Consensus 264 ~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~-~W~~~ 300 (446)
.. ++.||+.. . ...+++||+... .|..-
T Consensus 144 ~~~~g~l~vgt-~--------~~~l~~~d~~g~~~~~~~ 173 (330)
T 3hxj_A 144 VSEDGTIYVGS-N--------DNYLYAINPDGTEKWRFK 173 (330)
T ss_dssp ECTTSCEEEEC-T--------TSEEEEECTTSCEEEEEE
T ss_pred EcCCCEEEEEc-C--------CCEEEEECCCCCEeEEEe
Confidence 44 67777742 2 136899999822 36543
No 269
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=39.53 E-value=2.7e+02 Score=26.89 Aligned_cols=107 Identities=11% Similarity=0.165 Sum_probs=53.7
Q ss_pred EEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 161 AVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 161 ~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
+...+++.++.|+.+ ..+.+||. ....-..+..... .-.+++...|++.++.++.+ ..+.+||
T Consensus 392 ~~s~dg~~l~~~~~d-------~~v~~~~~--~~~~~~~~~~~~~--~v~~~~~s~d~~~l~~~~~d------~~v~~w~ 454 (577)
T 2ymu_A 392 AFSPDGQTIASASDD-------KTVKLWNR--NGQLLQTLTGHSS--SVWGVAFSPDDQTIASASDD------KTVKLWN 454 (577)
T ss_dssp EECTTSSCEEEEETT-------SEEEEECT--TCCEEEEEECCSS--CEEEEEECTTSSEEEEEETT------SEEEEEE
T ss_pred EECCCCCEEEEEeCC-------CEEEEEeC--CCCEEEEecCCCC--CeEEEEECCCCCEEEEEcCC------CEEEEEE
Confidence 333456666666643 25778887 4433333322111 11223333346666666543 4678888
Q ss_pred CCCCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 241 VEADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 241 ~~t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.....-..+..... ...++++. ++++.+.|+.++ .+..||....
T Consensus 455 ~~~~~~~~~~~~~~---~v~~~~~spd~~~las~~~d~--------~i~iw~~~~~ 499 (577)
T 2ymu_A 455 RNGQLLQTLTGHSS---SVRGVAFSPDGQTIASASDDK--------TVKLWNRNGQ 499 (577)
T ss_dssp TTSCEEEEEECCSS---CEEEEEECTTSCEEEEEETTS--------EEEEEETTSC
T ss_pred CCCCEEEEEcCCCC---CEEEEEEcCCCCEEEEEeCCC--------EEEEEcCCCC
Confidence 76554443322111 11233333 567777766432 5788886543
No 270
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=39.50 E-value=2.2e+02 Score=25.80 Aligned_cols=69 Identities=9% Similarity=0.079 Sum_probs=38.0
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCe-EEEEeCcCCCCcEEEccCCc---cCccceEEEEECCcEEEEEeccCCCCCCCC
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPD-VYVLDMVNNSSRWRRVKPMS---VARSFFACAVVGASTVCVAGGHDGQKNALK 234 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~-v~~~d~~~~t~~W~~~~~~p---~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~ 234 (446)
+++...++.+++.|+.++ . +.+||. .+.+- +..+. ....-.+++.-.|++..+.|+.+ .
T Consensus 200 ~~~~s~~g~~l~s~s~d~-------~~v~iwd~--~~~~~--~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d------~ 262 (355)
T 3vu4_A 200 MVRLNRKSDMVATCSQDG-------TIIRVFKT--EDGVL--VREFRRGLDRADVVDMKWSTDGSKLAVVSDK------W 262 (355)
T ss_dssp EEEECTTSSEEEEEETTC-------SEEEEEET--TTCCE--EEEEECTTCCSCEEEEEECTTSCEEEEEETT------C
T ss_pred EEEECCCCCEEEEEeCCC-------CEEEEEEC--CCCcE--EEEEEcCCCCCcEEEEEECCCCCEEEEEECC------C
Confidence 333444677777777543 4 888999 54443 22222 11122233333346777777653 5
Q ss_pred eEEEEECCCC
Q 013264 235 SAEVYDVEAD 244 (446)
Q Consensus 235 ~~~~yd~~t~ 244 (446)
.+.+||..+.
T Consensus 263 ~v~iw~~~~~ 272 (355)
T 3vu4_A 263 TLHVFEIFND 272 (355)
T ss_dssp EEEEEESSCC
T ss_pred EEEEEEccCC
Confidence 7788887654
No 271
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=39.03 E-value=2.4e+02 Score=26.06 Aligned_cols=73 Identities=10% Similarity=0.093 Sum_probs=43.3
Q ss_pred ceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCc---EEEccCCccCccce-EEEEECC-cEEEEEeccCCCCC
Q 013264 157 CQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSR---WRRVKPMSVARSFF-ACAVVGA-STVCVAGGHDGQKN 231 (446)
Q Consensus 157 ~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~---W~~~~~~p~~r~~~-~~~~~~d-~~iyv~GG~~~~~~ 231 (446)
..-+++.-+|.+||.+... ...++++|| .... |-.-.+....+.+. +++...| +.|++..+ .
T Consensus 139 ~nDvavD~~GnaYVt~s~~------~~~I~rV~p--dG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~---- 205 (334)
T 2p9w_A 139 VVQSAQDRDGNSYVAFALG------MPAIARVSA--DGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-P---- 205 (334)
T ss_dssp EEEEEECTTSCEEEEEEES------SCEEEEECT--TSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-S----
T ss_pred CceeEECCCCCEEEeCCCC------CCeEEEEeC--CCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-C----
Confidence 3455666789999986542 156999999 5432 54323223334443 5556534 46666654 2
Q ss_pred CCCeEEEEECCCC
Q 013264 232 ALKSAEVYDVEAD 244 (446)
Q Consensus 232 ~~~~~~~yd~~t~ 244 (446)
..+..||..+-
T Consensus 206 --g~L~~fD~~~p 216 (334)
T 2p9w_A 206 --RALTAFDVSKP 216 (334)
T ss_dssp --SSEEEEECSSS
T ss_pred --CeEEEEcCCCC
Confidence 46789998743
No 272
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=38.44 E-value=4e+02 Score=28.53 Aligned_cols=107 Identities=14% Similarity=0.123 Sum_probs=57.8
Q ss_pred CeEE-EEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceE
Q 013264 183 PDVY-VLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQG 261 (446)
Q Consensus 183 ~~v~-~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~ 261 (446)
..++ ++|. .+..-..+. ........++.-.|++..+++... ..+.++|..+++-..+..-..... ..
T Consensus 358 ~~l~~~~d~--~~~~~~~l~--~~~~~~~~~~~SpDG~~la~~~~~------~~v~~~d~~tg~~~~~~~~~~~~v--~~ 425 (1045)
T 1k32_A 358 GDFLGIYDY--RTGKAEKFE--ENLGNVFAMGVDRNGKFAVVANDR------FEIMTVDLETGKPTVIERSREAMI--TD 425 (1045)
T ss_dssp EEEEEEEET--TTCCEEECC--CCCCSEEEEEECTTSSEEEEEETT------SEEEEEETTTCCEEEEEECSSSCC--CC
T ss_pred CceEEEEEC--CCCCceEec--CCccceeeeEECCCCCEEEEECCC------CeEEEEECCCCceEEeccCCCCCc--cc
Confidence 3688 8999 667666655 222222333343456655555432 488999999987766542222111 12
Q ss_pred EE-EECCEEEEEeCCCC--CCCCcccCcEEEEeCCCCceEEcc
Q 013264 262 VC-LEGDRFFVVSGYGT--ESQGRFKPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 262 ~~-~~~~~lyv~GG~~~--~~~~~~~~~v~~yd~~~~~W~~~~ 301 (446)
++ .-+++..++++... .........++.+|+.+++...+.
T Consensus 426 ~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 426 FTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp EEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECS
T ss_pred eEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEee
Confidence 22 23555445544321 000012347999999988755554
No 273
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=37.55 E-value=3.4e+02 Score=27.41 Aligned_cols=109 Identities=9% Similarity=0.055 Sum_probs=55.0
Q ss_pred eEEEEECCC-CcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCc---
Q 013264 132 GLTIFNASN-GTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVAR--- 207 (446)
Q Consensus 132 ~~~~ydp~~-~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r--- 207 (446)
.++.+|..+ ++-..+..... ........+...+..|++...... .....++++|+ .+.+...+-......
T Consensus 264 ~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~pDg~~l~~~~~~~~---~~~~~i~~~d~--~~g~~~~~~~~~~~~~~~ 337 (741)
T 2ecf_A 264 KLGVISPAEQAQTQWIDLGKE-QDIYLARVNWRDPQHLSFQRQSRD---QKKLDLVEVTL--ASNQQRVLAHETSPTWVP 337 (741)
T ss_dssp EEEEECSSTTCCCEEECCCSC-SSEEEEEEEEEETTEEEEEEEETT---SSEEEEEEEET--TTCCEEEEEEEECSSCCC
T ss_pred EEEEEECCCCCceEEecCCCC-cceEEEEEEeCCCCEEEEEEeccc---CCeEEEEEEEC--CCCceEEEEEcCCCCcCC
Confidence 677888877 66554432210 111112222223444554433111 12457999999 777766553222110
Q ss_pred cceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCC
Q 013264 208 SFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPE 251 (446)
Q Consensus 208 ~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~ 251 (446)
.....+...|+++++.++.++ ...++.+|.... ...+..
T Consensus 338 ~~~~~~~spdg~~~~~~~~~g----~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 338 LHNSLRFLDDGSILWSSERTG----FQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp CCSCCEECTTSCEEEEECTTS----SCEEEEECSSSC-EEESCC
T ss_pred cCCceEECCCCeEEEEecCCC----ccEEEEEcCCCC-eeeeee
Confidence 011233334577766665432 257888887666 665543
No 274
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=37.03 E-value=1.9e+02 Score=29.18 Aligned_cols=72 Identities=11% Similarity=0.239 Sum_probs=45.3
Q ss_pred EEECCcEEEEEeccCCCCCCCCeEEEEEC-CCC--cEEecCCCCcc-----CC--cceEEEE--ECCE----EEEEeCCC
Q 013264 213 AVVGASTVCVAGGHDGQKNALKSAEVYDV-EAD--EWRMLPEMDEE-----RD--ECQGVCL--EGDR----FFVVSGYG 276 (446)
Q Consensus 213 ~~~~d~~iyv~GG~~~~~~~~~~~~~yd~-~t~--~W~~~~~~~~~-----r~--~~~~~~~--~~~~----lyv~GG~~ 276 (446)
++.+ ++||+.... ...++.+|. .|. .|+.-...... .. ...+.++ .+++ ||+...
T Consensus 59 ~v~~-g~vyv~~~~------~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~-- 129 (599)
T 1w6s_A 59 LVVD-GKMYIHTSF------PNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQL-- 129 (599)
T ss_dssp EEET-TEEEEECST------TTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECT--
T ss_pred EEEC-CEEEEEeCC------CCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcC--
Confidence 4456 899998652 146889998 776 59876443321 10 0124456 6777 887532
Q ss_pred CCCCCcccCcEEEEeCCCCc--eEEc
Q 013264 277 TESQGRFKPDAECYDPKTGS--WSKF 300 (446)
Q Consensus 277 ~~~~~~~~~~v~~yd~~~~~--W~~~ 300 (446)
...++++|.++++ |+.-
T Consensus 130 -------dg~l~AlDa~TG~~~W~~~ 148 (599)
T 1w6s_A 130 -------DGNVAALNAETGETVWKVE 148 (599)
T ss_dssp -------TSEEEEEETTTCCEEEEEE
T ss_pred -------CCEEEEEECCCCCEEEeec
Confidence 1369999998875 8753
No 275
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=36.85 E-value=94 Score=29.86 Aligned_cols=119 Identities=12% Similarity=-0.010 Sum_probs=63.3
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCC---CCCCCCeEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDG---QKNALKSAEVY 239 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~---~~~~~~~~~~y 239 (446)
....+||.-..... ..+.+.++|+ .+++ .+...+..... .+++-.| .++||.--... .+...+.+.++
T Consensus 83 ~~~~vyV~n~~~~~---~~~~VsVID~--~t~~--vv~~I~vG~~P-gia~SpDgk~lyVan~~~~~~~~G~~~~~Vsvi 154 (426)
T 3c75_H 83 DARRVYIQDPAHFA---AITQQFVIDG--STGR--ILGMTDGGFLP-HPVAAEDGSFFAQASTVFERIARGKRTDYVEVF 154 (426)
T ss_dssp CTTEEEEEECTTTC---SSEEEEEEET--TTTE--EEEEEEECSSC-EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CCCEEEEECCCcCC---CCCeEEEEEC--CCCE--EEEEEECCCCC-ceEECCCCCEEEEEeccccccccCCCCCEEEEE
Confidence 34678887543211 1168999999 5544 44444444444 4444444 56888742100 00013689999
Q ss_pred ECCCCcEEecCCCC-ccC----CcceEEEE--ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 240 DVEADEWRMLPEMD-EER----DECQGVCL--EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 240 d~~t~~W~~~~~~~-~~r----~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
|+.+.+=..--+++ ..| ..-+.+++ .+..+||..-. ..+.|.++|+.+++=
T Consensus 155 D~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~-------~~~~VsVID~~t~kv 212 (426)
T 3c75_H 155 DPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS-------PAPAVGVVDLEGKTF 212 (426)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS-------SSCEEEEEETTTTEE
T ss_pred ECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC-------CCCeEEEEECCCCeE
Confidence 99998643211111 001 00122333 34588887421 134799999998764
No 276
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=36.58 E-value=2.6e+02 Score=25.91 Aligned_cols=160 Identities=12% Similarity=0.057 Sum_probs=84.1
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc--CCccCcc
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK--PMSVARS 208 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~--~~p~~r~ 208 (446)
.+..+++.......+.... ... ....++. .++.||+.-.. .+.++++++ ....-+.+. .+..|
T Consensus 139 ~I~r~~~~g~~~~~~~~~~--~~~-p~glavd~~~g~lY~~d~~-------~~~I~~~~~--dg~~~~~l~~~~l~~P-- 204 (386)
T 3v65_B 139 RILRANLNGSNVEEVVSTG--LES-PGGLAVDWVHDKLYWTDSG-------TSRIEVANL--DGAHRKVLLWQSLEKP-- 204 (386)
T ss_dssp EEEEEETTSCCEEEEECSS--CSC-CCCEEEETTTTEEEEEETT-------TTEEEECBT--TSCSCEEEECSSCSCE--
T ss_pred cEEEEecCCCCcEEEEeCC--CCC-ccEEEEEeCCCeEEEEcCC-------CCeEEEEeC--CCCceEEeecCCCCCC--
Confidence 4566666665544432221 111 1233443 47899998542 346888888 444333332 22222
Q ss_pred ceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecC--CCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcc
Q 013264 209 FFACAVV-GASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLP--EMDEERDECQGVCLE--GDRFFVVSGYGTESQGRF 283 (446)
Q Consensus 209 ~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~--~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~ 283 (446)
.++++- .++.||+.--. ....++++|+....-+.+. .+..| .++++. +++||+.-..
T Consensus 205 -~giavdp~~g~ly~td~~-----~~~~I~r~~~dG~~~~~~~~~~~~~P----nGlavd~~~~~lY~aD~~-------- 266 (386)
T 3v65_B 205 -RAIALHPMEGTIYWTDWG-----NTPRIEASSMDGSGRRIIADTHLFWP----NGLTIDYAGRRMYWVDAK-------- 266 (386)
T ss_dssp -EEEEEETTTTEEEEEECS-----SSCEEEEEETTSCSCEEEECSSCSCE----EEEEEEGGGTEEEEEETT--------
T ss_pred -cEEEEEcCCCeEEEeccC-----CCCEEEEEeCCCCCcEEEEECCCCCe----eeEEEeCCCCEEEEEECC--------
Confidence 233443 23799987421 1368999998765433332 22212 355553 7899998542
Q ss_pred cCcEEEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcC
Q 013264 284 KPDAECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGK 334 (446)
Q Consensus 284 ~~~v~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG 334 (446)
.+.|+++|+....=..+... .+. .-.+.++..+ .||+..-
T Consensus 267 ~~~I~~~d~dG~~~~~~~~~---~~~---~P~giav~~~-----~ly~td~ 306 (386)
T 3v65_B 267 HHVIERANLDGSHRKAVISQ---GLP---HPFAITVFED-----SLYWTDW 306 (386)
T ss_dssp TTEEEEECTTSCSCEEEECS---SCS---SEEEEEEETT-----EEEEEET
T ss_pred CCEEEEEeCCCCeeEEEEEC---CCC---CceEEEEECC-----EEEEeeC
Confidence 34799999875433333211 111 2234445454 8998854
No 277
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=35.53 E-value=46 Score=31.06 Aligned_cols=65 Identities=12% Similarity=0.033 Sum_probs=32.5
Q ss_pred ECCcEEEEEeccCCCCCCCCeEEEEECCCC--cEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeC
Q 013264 215 VGASTVCVAGGHDGQKNALKSAEVYDVEAD--EWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDP 292 (446)
Q Consensus 215 ~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~--~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~ 292 (446)
+.++.||+.+. + ..+..+|..++ .|+.-. . +.. .+.++.++++|+.++.+ ..++++|.
T Consensus 7 v~~~~v~~gs~-d------g~v~a~d~~tG~~~W~~~~--~-~~~--s~p~~~~g~~~v~~s~d--------g~l~a~d~ 66 (369)
T 2hz6_A 7 LPETLLFVSTL-D------GSLHAVSKRTGSIKWTLKE--D-PVL--QVPTHVEEPAFLPDPND--------GSLYTLGS 66 (369)
T ss_dssp -CTTEEEEEET-T------SEEEEEETTTCCEEEEEEC--C-CSC--CCC-----CCEEECTTT--------CCEEEC--
T ss_pred eeCCEEEEEcC-C------CEEEEEECCCCCEEEEecC--C-Cce--ecceEcCCCEEEEeCCC--------CEEEEEEC
Confidence 34478877543 1 47899998776 487543 1 111 22344567788876533 26899998
Q ss_pred CCC--ceEE
Q 013264 293 KTG--SWSK 299 (446)
Q Consensus 293 ~~~--~W~~ 299 (446)
+++ .|..
T Consensus 67 ~tG~~~w~~ 75 (369)
T 2hz6_A 67 KNNEGLTKL 75 (369)
T ss_dssp ---CCSEEC
T ss_pred CCCceeeee
Confidence 665 4653
No 278
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=35.36 E-value=3.7e+02 Score=27.20 Aligned_cols=156 Identities=10% Similarity=0.053 Sum_probs=79.3
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCC---------CCccCeEEEEeCcCCCCcEE--Ec
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPIT---------LEPVPDVYVLDMVNNSSRWR--RV 200 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~---------~~~~~~v~~~d~~~~t~~W~--~~ 200 (446)
.++.+|..+++........ .. ....+-.-+++.++++..+... ......+++++. .+..-. .+
T Consensus 152 ~i~v~d~~tg~~~~~~~~~---~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l--~t~~~~~~~v 225 (710)
T 2xdw_A 152 TIKFMKVDGAKELPDVLER---VK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVL--GTDQSEDILC 225 (710)
T ss_dssp EEEEEETTTTEEEEEEEEE---EC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEET--TSCGGGCEEE
T ss_pred EEEEEECCCCCCCcccccC---cc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEEC--CCCcccceEE
Confidence 6778888888776542211 00 1122222355444444332210 012346899998 665532 22
Q ss_pred cCCc-cCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCC------C--cEEecCCCCccCCcceEEEEECCEEEE
Q 013264 201 KPMS-VARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA------D--EWRMLPEMDEERDECQGVCLEGDRFFV 271 (446)
Q Consensus 201 ~~~p-~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t------~--~W~~~~~~~~~r~~~~~~~~~~~~lyv 271 (446)
-..+ .+........-.|++..++....... ....++++|..+ . .+..+..-..... ......++.||+
T Consensus 226 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~-~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dg~~l~~ 302 (710)
T 2xdw_A 226 AEFPDEPKWMGGAELSDDGRYVLLSIREGCD-PVNRLWYCDLQQESNGITGILKWVKLIDNFEGEY--DYVTNEGTVFTF 302 (710)
T ss_dssp ECCTTCTTCEEEEEECTTSCEEEEEEECSSS-SCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCE--EEEEEETTEEEE
T ss_pred eccCCCCeEEEEEEEcCCCCEEEEEEEccCC-CccEEEEEECcccccccCCccceEEeeCCCCcEE--EEEeccCCEEEE
Confidence 1111 12222334444445544443322211 136889999876 4 5777654222211 223445678888
Q ss_pred EeCCCCCCCCcccCcEEEEeCCCC---ceEEcc
Q 013264 272 VSGYGTESQGRFKPDAECYDPKTG---SWSKFD 301 (446)
Q Consensus 272 ~GG~~~~~~~~~~~~v~~yd~~~~---~W~~~~ 301 (446)
.+..+. ....++.+|+.+. .|+.+.
T Consensus 303 ~s~~~~-----~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 303 KTNRHS-----PNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp EECTTC-----TTCEEEEEETTSCCGGGCEEEE
T ss_pred EECCCC-----CCCEEEEEeCCCCCcccceecc
Confidence 876432 1347999999876 588876
No 279
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=34.85 E-value=1.3e+02 Score=27.69 Aligned_cols=68 Identities=18% Similarity=0.294 Sum_probs=41.8
Q ss_pred eCCEEEEEeCcCC---CCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECC-cEEEEEeccCCCCCCCCeEEEE
Q 013264 164 ASRKLLLIGGWDP---ITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGA-STVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 164 ~~~~lyv~GG~~~---~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d-~~iyv~GG~~~~~~~~~~~~~y 239 (446)
-++.+|+....++ ......+.++++|. .+.+ .+..++... -.++++-.| .+||+.++ +++.+|
T Consensus 264 dg~~lyv~~~~~~~~~~~~~~~~~v~viD~--~t~~--~v~~i~~~~-p~~ia~spdg~~l~v~n~--------~~v~v~ 330 (361)
T 2oiz_A 264 ASGRMYVFMHPDGKEGTHKFPAAEIWVMDT--KTKQ--RVARIPGRD-ALSMTIDQQRNLMLTLDG--------GNVNVY 330 (361)
T ss_dssp TTTEEEEEEESSCCTTCTTCCCSEEEEEET--TTTE--EEEEEECTT-CCEEEEETTTTEEEEECS--------SCEEEE
T ss_pred CCCeEEEEEccCCCcccccCCCceEEEEEC--CCCc--EEEEEecCC-eeEEEECCCCCEEEEeCC--------CeEEEE
Confidence 3588999854211 11112568999999 5554 455555555 556655544 46776542 578899
Q ss_pred ECCCC
Q 013264 240 DVEAD 244 (446)
Q Consensus 240 d~~t~ 244 (446)
|..+.
T Consensus 331 D~~t~ 335 (361)
T 2oiz_A 331 DISQP 335 (361)
T ss_dssp ECSSS
T ss_pred ECCCC
Confidence 98876
No 280
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=34.67 E-value=3.5e+02 Score=26.81 Aligned_cols=95 Identities=13% Similarity=0.065 Sum_probs=50.8
Q ss_pred eeEEEEECCCCcEEecCCCCCCCCccceEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 131 YGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 131 ~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
..+.++|..+++-...-+. ....|+++..- +..+|+.+. ...+.++|+ .+.+-+.+...+....-
T Consensus 177 ~~V~viD~~t~~v~~~i~~----g~~p~~v~~SpDGr~lyv~~~--------dg~V~viD~--~~~t~~~v~~i~~G~~P 242 (567)
T 1qks_A 177 GQIALIDGSTYEIKTVLDT----GYAVHISRLSASGRYLFVIGR--------DGKVNMIDL--WMKEPTTVAEIKIGSEA 242 (567)
T ss_dssp TEEEEEETTTCCEEEEEEC----SSCEEEEEECTTSCEEEEEET--------TSEEEEEET--TSSSCCEEEEEECCSEE
T ss_pred CeEEEEECCCCeEEEEEeC----CCCccceEECCCCCEEEEEcC--------CCeEEEEEC--CCCCCcEeEEEecCCCC
Confidence 3678899988765432111 22234555433 445777542 236999999 51222333333333222
Q ss_pred eEEEEE-----CCcEEEEEeccCCCCCCCCeEEEEECCCCc
Q 013264 210 FACAVV-----GASTVCVAGGHDGQKNALKSAEVYDVEADE 245 (446)
Q Consensus 210 ~~~~~~-----~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 245 (446)
..+++- ++..+||..-. .+.+.++|..|.+
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~------~~~v~ViD~~t~~ 277 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYW------PPQYVIMDGETLE 277 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEE------TTEEEEEETTTCC
T ss_pred ceeEEccccCCCCCEEEEEEcc------CCeEEEEECCCCc
Confidence 344444 32467776432 2677899976654
No 281
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=34.53 E-value=96 Score=30.62 Aligned_cols=98 Identities=12% Similarity=0.111 Sum_probs=54.3
Q ss_pred EEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEE
Q 013264 185 VYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCL 264 (446)
Q Consensus 185 v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~ 264 (446)
+.+||. .+.+-+.+...+. ...+.-.||+..++++.+.. ....++++|..+++++.+..-.... ...+.
T Consensus 134 ~~l~d~--~~g~~~~l~~~~~----~~~~~spDG~~la~~~~~~~--~~~~i~~~d~~~g~~~~l~~~~~~~---~~~~~ 202 (582)
T 3o4h_A 134 VALYAL--DGGGLRELARLPG----FGFVSDIRGDLIAGLGFFGG--GRVSLFTSNLSSGGLRVFDSGEGSF---SSASI 202 (582)
T ss_dssp EEEEEE--ETTEEEEEEEESS----CEEEEEEETTEEEEEEEEET--TEEEEEEEETTTCCCEEECCSSCEE---EEEEE
T ss_pred ceEEEc--cCCcEEEeecCCC----ceEEECCCCCEEEEEEEcCC--CCeEEEEEcCCCCCceEeecCCCcc---ccceE
Confidence 347898 7777666654332 22222223555555544322 1256999999999988775432211 22222
Q ss_pred -ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEE
Q 013264 265 -EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSK 299 (446)
Q Consensus 265 -~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~ 299 (446)
-+|+.++.+..++ ...++.+|+++++...
T Consensus 203 SpDG~~l~~~~~~~------~~~i~~~d~~~~~~~~ 232 (582)
T 3o4h_A 203 SPGMKVTAGLETAR------EARLVTVDPRDGSVED 232 (582)
T ss_dssp CTTSCEEEEEECSS------CEEEEEECTTTCCEEE
T ss_pred CCCCCEEEEccCCC------eeEEEEEcCCCCcEEE
Confidence 2454433433222 1368999999988773
No 282
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=34.27 E-value=2.5e+02 Score=25.04 Aligned_cols=65 Identities=9% Similarity=0.270 Sum_probs=34.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-ceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-FFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
.++.+++.|+.++ .+.+||. .+.+.... +..... -.+++...+++..+.||.+ ..+.+||..
T Consensus 86 ~~~~~l~s~s~D~-------~v~lwd~--~~~~~~~~--~~~h~~~v~~v~~sp~~~~l~s~~~d------~~i~~wd~~ 148 (343)
T 2xzm_R 86 QENCFAISSSWDK-------TLRLWDL--RTGTTYKR--FVGHQSEVYSVAFSPDNRQILSAGAE------REIKLWNIL 148 (343)
T ss_dssp SSTTEEEEEETTS-------EEEEEET--TSSCEEEE--EECCCSCEEEEEECSSTTEEEEEETT------SCEEEEESS
T ss_pred CCCCEEEEEcCCC-------cEEEEEC--CCCcEEEE--EcCCCCcEEEEEECCCCCEEEEEcCC------CEEEEEecc
Confidence 4566666776543 6889998 65543221 111111 1223333345566666653 467888876
Q ss_pred CCc
Q 013264 243 ADE 245 (446)
Q Consensus 243 t~~ 245 (446)
...
T Consensus 149 ~~~ 151 (343)
T 2xzm_R 149 GEC 151 (343)
T ss_dssp SCE
T ss_pred CCc
Confidence 443
No 283
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=34.23 E-value=2.5e+02 Score=24.87 Aligned_cols=110 Identities=13% Similarity=0.193 Sum_probs=55.6
Q ss_pred EEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccce-EEEEECCcEEEEEeccCCCCCCCCeEEE
Q 013264 160 VAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFF-ACAVVGASTVCVAGGHDGQKNALKSAEV 238 (446)
Q Consensus 160 ~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~-~~~~~~d~~iyv~GG~~~~~~~~~~~~~ 238 (446)
++...++..++.|+.++ .+.+||. .+.+-.. .+....... ++....++.+++.|+.+ ..+.+
T Consensus 71 ~~~s~dg~~l~s~s~D~-------~v~~wd~--~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~s~D------~~i~v 133 (319)
T 3frx_A 71 CTLTADGAYALSASWDK-------TLRLWDV--ATGETYQ--RFVGHKSDVMSVDIDKKASMIISGSRD------KTIKV 133 (319)
T ss_dssp EEECTTSSEEEEEETTS-------EEEEEET--TTTEEEE--EEECCSSCEEEEEECTTSCEEEEEETT------SCEEE
T ss_pred EEECCCCCEEEEEeCCC-------EEEEEEC--CCCCeeE--EEccCCCcEEEEEEcCCCCEEEEEeCC------CeEEE
Confidence 33334666777777543 6889999 6554321 111111112 22333346677777654 46788
Q ss_pred EECCCCcEEecCCCCccCCcceEEEEE-------CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 239 YDVEADEWRMLPEMDEERDECQGVCLE-------GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 239 yd~~t~~W~~~~~~~~~r~~~~~~~~~-------~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
||.....-..+..-. .....+.+. ++.+++.|+.+ ..+..||+.+.+-
T Consensus 134 wd~~~~~~~~~~~h~---~~v~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~~wd~~~~~~ 188 (319)
T 3frx_A 134 WTIKGQCLATLLGHN---DWVSQVRVVPNEKADDDSVTIISAGND--------KMVKAWNLNQFQI 188 (319)
T ss_dssp EETTSCEEEEECCCS---SCEEEEEECCC------CCEEEEEETT--------SCEEEEETTTTEE
T ss_pred EECCCCeEEEEeccC---CcEEEEEEccCCCCCCCccEEEEEeCC--------CEEEEEECCcchh
Confidence 888655433322111 111122222 22355566643 2688999987653
No 284
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=33.75 E-value=3.9e+02 Score=27.01 Aligned_cols=127 Identities=13% Similarity=0.163 Sum_probs=69.8
Q ss_pred EEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCC------C--cEEEccCCccCccceEEEEECCcEEEEEeccCCCC
Q 013264 159 CVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNS------S--RWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQK 230 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t------~--~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~ 230 (446)
.....-+++..++...... ...++++++|. .+ . .++.+..-.... ......-+ ++||+.+..+..
T Consensus 237 ~~~~SpDg~~l~~~~~~~~--~~~~~l~~~d~--~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dg-~~l~~~s~~~~~- 309 (710)
T 2xdw_A 237 GAELSDDGRYVLLSIREGC--DPVNRLWYCDL--QQESNGITGILKWVKLIDNFEGE-YDYVTNEG-TVFTFKTNRHSP- 309 (710)
T ss_dssp EEEECTTSCEEEEEEECSS--SSCCEEEEEEG--GGSSSSSCSSCCCEEEECSSSSC-EEEEEEET-TEEEEEECTTCT-
T ss_pred EEEEcCCCCEEEEEEEccC--CCccEEEEEEC--cccccccCCccceEEeeCCCCcE-EEEEeccC-CEEEEEECCCCC-
Confidence 3344445554444432211 12568999998 54 3 577765432222 12222333 688888765432
Q ss_pred CCCCeEEEEECCCC---cEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc-eEEcc
Q 013264 231 NALKSAEVYDVEAD---EWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGS-WSKFD 301 (446)
Q Consensus 231 ~~~~~~~~yd~~t~---~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~ 301 (446)
...+.++|..+. .|+.+.+-.....- ..++.. ++.+++....++ ...++.+|+.+++ ...+.
T Consensus 310 --~~~l~~~d~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~lv~~~~~~g------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 310 --NYRLINIDFTDPEESKWKVLVPEHEKDVL-EWVACVRSNFLVLCYLHDV------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp --TCEEEEEETTSCCGGGCEEEECCCSSCEE-EEEEEETTTEEEEEEEETT------EEEEEEEETTTCCEEEEEC
T ss_pred --CCEEEEEeCCCCCcccceeccCCCCCCeE-EEEEEEcCCEEEEEEEECC------EEEEEEEECCCCCEEEecC
Confidence 368899998875 58877432221111 344555 778887765432 2368899986654 44444
No 285
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=31.33 E-value=2.3e+02 Score=28.75 Aligned_cols=104 Identities=7% Similarity=0.075 Sum_probs=52.2
Q ss_pred EEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC-cEE--Ec----cCCccCccceEEEEE-CCcEEEEEeccCCCCCC
Q 013264 161 AVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS-RWR--RV----KPMSVARSFFACAVV-GASTVCVAGGHDGQKNA 232 (446)
Q Consensus 161 ~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~-~W~--~~----~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~ 232 (446)
+....+++|+|-|. .+|+++. ... ... .+ +.+|. ... ++... .++++|+|-|
T Consensus 449 it~~rg~~yfFKg~---------~yWr~~~--~~~~~~~P~~Is~~wp~LP~-~ID-AA~~~~~~~k~yFFkG------- 508 (631)
T 1ck7_A 449 IAQIRGEIFFFKDR---------FIWRTVT--PRDKPMGPLLVATFWPELPE-KID-AVYEAPQEEKAVFFAG------- 508 (631)
T ss_dssp EEECSSSEEEECSS---------EEEEESC--TTSCCEEEEEGGGTCTTSCS-SCS-BCCEETTTTEEEEEET-------
T ss_pred eEecCCcEEEEcCC---------EEEEEcC--CCCCCCCceeccccCCCCCc-cce-EEEEECCCCEEEEEec-------
Confidence 34478999999652 4677766 221 111 11 12221 122 22222 2378999966
Q ss_pred CCeEEEEECCCC--cE-EecCC--CCccCCcceEEEE--ECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 233 LKSAEVYDVEAD--EW-RMLPE--MDEERDECQGVCL--EGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 233 ~~~~~~yd~~t~--~W-~~~~~--~~~~r~~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+..|+||..+- -+ +.+.. +|......-++.. .++++|+|-|. ..+.||..++
T Consensus 509 -~~yWry~~~~l~~GYPk~Is~~G~P~~~~~IDAAf~~~~~gktYFFkG~----------~ywryd~~~~ 567 (631)
T 1ck7_A 509 -NEYWIYSASTLERGYPKPLTSLGLPPDVQRVDAAFNWSKNKKTYIFAGD----------KFWRYNEVKK 567 (631)
T ss_dssp -TEEEEEETTEECTTCCEEGGGGTCCTTCCCCCBCCCCTTTCEEEEEETT----------EEEEEETTTT
T ss_pred -CEEEEECCCccccCCCccchhcCCCCCCCcceeEEEecCCCeEEEEECC----------EEEEEcCCcc
Confidence 46788885210 00 01111 1111001112222 36799999773 6889998765
No 286
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=31.09 E-value=3.7e+02 Score=25.97 Aligned_cols=57 Identities=12% Similarity=0.215 Sum_probs=38.6
Q ss_pred CcEEEEEeccCCCCCCCCeEEEEECCCCcEEec--CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCC
Q 013264 217 ASTVCVAGGHDGQKNALKSAEVYDVEADEWRML--PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKT 294 (446)
Q Consensus 217 d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~--~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~ 294 (446)
++++|++-| +..+.||..+++.... +.++. . -++...++++|+|-|. ..+.||+.+
T Consensus 158 ~~~~yfFkG--------~~yw~yd~~~~~~~~~~w~gi~~--i--DAA~~~~g~~YfFkG~----------~y~rfd~~~ 215 (460)
T 1qhu_A 158 DEGILFFQG--------NRKWFWDLTTGTKKERSWPAVGN--C--TSALRWLGRYYCFQGN----------QFLRFNPVS 215 (460)
T ss_dssp SSEEEEEET--------TEEEEEETTTTEEEEECCTTSCC--C--SEEEEETTEEEEEETT----------EEEEECTTT
T ss_pred CCeEEEEec--------ccEEEEecccceeecccCCCCCc--c--chheeeCCceEEEECC----------EEEEEcCcc
Confidence 378899877 4679999988765432 22332 2 3555567899999884 577888765
Q ss_pred C
Q 013264 295 G 295 (446)
Q Consensus 295 ~ 295 (446)
.
T Consensus 216 ~ 216 (460)
T 1qhu_A 216 G 216 (460)
T ss_dssp C
T ss_pred C
Confidence 4
No 287
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=30.93 E-value=2.7e+02 Score=24.34 Aligned_cols=128 Identities=12% Similarity=0.198 Sum_probs=65.0
Q ss_pred eEEEEECC-CCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCC-CCcEEEccCCccCccc
Q 013264 132 GLTIFNAS-NGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNN-SSRWRRVKPMSVARSF 209 (446)
Q Consensus 132 ~~~~ydp~-~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~-t~~W~~~~~~p~~r~~ 209 (446)
.+.+||+. ...|..-...+ . ..+.+...++.||+.. . ...++.||+ . ...|..... .. ..
T Consensus 118 ~l~~~d~~g~~~~~~~~~~~----~-~~~~~~~~~g~l~vgt-~-------~~~l~~~d~--~g~~~~~~~~~--~~-~~ 179 (330)
T 3hxj_A 118 HLYAINTDGTEKWRFKTKKA----I-YATPIVSEDGTIYVGS-N-------DNYLYAINP--DGTEKWRFKTN--DA-IT 179 (330)
T ss_dssp EEEEECTTSCEEEEEECSSC----C-CSCCEECTTSCEEEEC-T-------TSEEEEECT--TSCEEEEEECS--SC-CC
T ss_pred EEEEEcCCCCEEEEEcCCCc----e-eeeeEEcCCCEEEEEc-C-------CCEEEEECC--CCCEeEEEecC--CC-ce
Confidence 47788887 44576543222 1 1122332367777742 1 236899999 5 233654322 11 11
Q ss_pred eEEEEECCcEEEEEeccCCCCCCCCeEEEEECCC-CcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcE
Q 013264 210 FACAVVGASTVCVAGGHDGQKNALKSAEVYDVEA-DEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 210 ~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t-~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v 287 (446)
.+.+...++.||+.. ..+.+||... ..|+....... . .+.+.. ++.||+... ...+
T Consensus 180 ~~~~~d~~g~l~v~t---------~~l~~~d~~g~~~~~~~~~~~~--~--~~~~~~~~g~l~v~t~---------~~gl 237 (330)
T 3hxj_A 180 SAASIGKDGTIYFGS---------DKVYAINPDGTEKWNFYAGYWT--V--TRPAISEDGTIYVTSL---------DGHL 237 (330)
T ss_dssp SCCEECTTCCEEEES---------SSEEEECTTSCEEEEECCSSCC--C--SCCEECTTSCEEEEET---------TTEE
T ss_pred eeeEEcCCCEEEEEe---------CEEEEECCCCcEEEEEccCCcc--e--eceEECCCCeEEEEcC---------CCeE
Confidence 222332347888754 3567888432 35765432211 1 223333 458887532 1268
Q ss_pred EEEeCCCCc-eEE
Q 013264 288 ECYDPKTGS-WSK 299 (446)
Q Consensus 288 ~~yd~~~~~-W~~ 299 (446)
.+||+.... |..
T Consensus 238 ~~~~~~g~~~~~~ 250 (330)
T 3hxj_A 238 YAINPDGTEKWRF 250 (330)
T ss_dssp EEECTTSCEEEEE
T ss_pred EEECCCCCEeEEe
Confidence 889875543 543
No 288
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=30.89 E-value=3.1e+02 Score=24.94 Aligned_cols=173 Identities=10% Similarity=-0.069 Sum_probs=85.7
Q ss_pred eEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCcc-ce
Q 013264 132 GLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARS-FF 210 (446)
Q Consensus 132 ~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~-~~ 210 (446)
.+.++|+.+.+-....... ..-.+++..-++++++.++. +.+.+++. .+.............. -.
T Consensus 158 ~i~iwd~~~~~~~~~~~~~----~~V~~v~fspdg~~l~s~s~--------~~~~~~~~--~~~~~~~~~~~~~~~~~v~ 223 (365)
T 4h5i_A 158 IMRIIDPSDLTEKFEIETR----GEVKDLHFSTDGKVVAYITG--------SSLEVIST--VTGSCIARKTDFDKNWSLS 223 (365)
T ss_dssp EEEEEETTTTEEEEEEECS----SCCCEEEECTTSSEEEEECS--------SCEEEEET--TTCCEEEEECCCCTTEEEE
T ss_pred EEEEeECCCCcEEEEeCCC----CceEEEEEccCCceEEeccc--------eeEEEEEe--ccCcceeeeecCCCCCCEE
Confidence 4667888776654332211 11233444456666666652 23667777 5555433222221111 12
Q ss_pred EEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCcEEecCC--CCccCCcceEEEE-ECCEEEEEeCCCCCCCCcccCcE
Q 013264 211 ACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADEWRMLPE--MDEERDECQGVCL-EGDRFFVVSGYGTESQGRFKPDA 287 (446)
Q Consensus 211 ~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~r~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~v 287 (446)
+++...|++.++.++.+... ...+..+|........... +........++++ -++++.+.|+.++ .|
T Consensus 224 ~v~fspdg~~l~~~s~d~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~--------~V 293 (365)
T 4h5i_A 224 KINFIADDTVLIAASLKKGK--GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN--------SI 293 (365)
T ss_dssp EEEEEETTEEEEEEEESSSC--CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS--------CE
T ss_pred EEEEcCCCCEEEEEecCCcc--eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC--------EE
Confidence 33334457877877765432 2356677776665543321 1111111123333 2667777787543 68
Q ss_pred EEEeCCCCceEEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCCC
Q 013264 288 ECYDPKTGSWSKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQQ 337 (446)
Q Consensus 288 ~~yd~~~~~W~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~~ 337 (446)
..||.++.+-...- ..........+.+.. ++++++-|+.++
T Consensus 294 ~iwd~~~~~~~~~~------~~gH~~~V~~v~fSp---dg~~laS~S~D~ 334 (365)
T 4h5i_A 294 ALVKLKDLSMSKIF------KQAHSFAITEVTISP---DSTYVASVSAAN 334 (365)
T ss_dssp EEEETTTTEEEEEE------TTSSSSCEEEEEECT---TSCEEEEEETTS
T ss_pred EEEECCCCcEEEEe------cCcccCCEEEEEECC---CCCEEEEEeCCC
Confidence 99999887532210 001112233344432 257888887765
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=30.75 E-value=4.8e+02 Score=27.18 Aligned_cols=107 Identities=9% Similarity=-0.001 Sum_probs=59.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccC--CccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKP--MSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~--~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.||+.--. ....++++++ ....-+.+.. +..| .++++- .+++||++=. ....|+++|
T Consensus 524 ~~g~LYwtD~g------~~~~I~~~~~--dG~~~~~lv~~~l~~P---~GLavD~~~~~LYwaD~------~~~~I~~~d 586 (791)
T 3m0c_C 524 VHGFMYWTDWG------TPAKIKKGGL--NGVDIYSLVTENIQWP---NGITLDLLSGRLYWVDS------KLHSISSID 586 (791)
T ss_dssp TTTEEEEEECS------SSCEEEEEET--TSCCEEEEECSSCSCE---EEEEEETTTTEEEEEET------TTTEEEEEE
T ss_pred CCCCEEEecCC------CCCeEEEEec--CCCceEEEEeCCCCCc---eEEEEecCCCeEEEEeC------CCCcEEEEe
Confidence 35889987421 1246889998 4444333322 2222 234433 2489999832 236899999
Q ss_pred CCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 241 VEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 241 ~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
+....=+.+...........++++.+++||+.-.. .+.|+++|..++
T Consensus 587 ~dG~~~~~v~~~~~~l~~P~glav~~~~lYwtD~~--------~~~I~~~dk~tG 633 (791)
T 3m0c_C 587 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAIFSANRLTG 633 (791)
T ss_dssp TTSCSCEEEEECTTTTSSEEEEEEETTEEEEEETT--------TTEEEEEETTTC
T ss_pred cCCCceEEEecCCCccCCCCEEEEeCCEEEEEECC--------CCEEEEEeCCCC
Confidence 87543333321111111125778889999998643 236677765444
No 290
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=30.63 E-value=78 Score=30.45 Aligned_cols=74 Identities=14% Similarity=0.117 Sum_probs=45.5
Q ss_pred eCCEEEEEeCcC--CCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc--EEEEEeccCCCCCCCCeEEEE
Q 013264 164 ASRKLLLIGGWD--PITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS--TVCVAGGHDGQKNALKSAEVY 239 (446)
Q Consensus 164 ~~~~lyv~GG~~--~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~--~iyv~GG~~~~~~~~~~~~~y 239 (446)
.++++||.-... +......+++.++|. . +++.+...+.+..-.++++-.|+ .+|+.... .+++.+|
T Consensus 329 dg~rlyVa~~~~~~gthk~~s~~VsVID~--~--T~kvv~~I~vg~~P~gia~spDg~~~lyv~n~~------s~~VsVI 398 (426)
T 3c75_H 329 QSDRIYLLVDQRDEWKHKAASRFVVVLNA--E--TGERINKIELGHEIDSINVSQDAEPLLYALSAG------TQTLHIY 398 (426)
T ss_dssp GGTEEEEEEEECCTTCTTSCEEEEEEEET--T--TCCEEEEEEEEEEECEEEECCSSSCEEEEEETT------TTEEEEE
T ss_pred CCCEEEEEecccccccccCCCCEEEEEEC--C--CCeEEEEEECCCCcCeEEEccCCCEEEEEEcCC------CCeEEEE
Confidence 458899974321 111113568999999 4 44455556666555666665554 57776532 2789999
Q ss_pred ECCCCcEE
Q 013264 240 DVEADEWR 247 (446)
Q Consensus 240 d~~t~~W~ 247 (446)
|..+.+=.
T Consensus 399 D~~t~kvv 406 (426)
T 3c75_H 399 DAATGEEL 406 (426)
T ss_dssp ETTTCCEE
T ss_pred ECCCCCEE
Confidence 98776543
No 291
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=30.10 E-value=3.6e+02 Score=25.53 Aligned_cols=105 Identities=10% Similarity=0.112 Sum_probs=58.7
Q ss_pred CEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECCCCc
Q 013264 166 RKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVEADE 245 (446)
Q Consensus 166 ~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~t~~ 245 (446)
+.||+.-.. +.+.++|+ .+.....+.. ....-.++++-.++.|||.--.... ....+..++... .
T Consensus 153 g~Lyv~D~~--------~~I~~id~--~~g~v~~~~~--~~~~P~giavd~dG~lyVad~~~~~--~~~gv~~~~~~~-~ 217 (433)
T 4hw6_A 153 DDLYWVGQR--------DAFRHVDF--VNQYVDIKTT--NIGQCADVNFTLNGDMVVVDDQSSD--TNTGIYLFTRAS-G 217 (433)
T ss_dssp CEEEEECBT--------SCEEEEET--TTTEEEEECC--CCSCEEEEEECTTCCEEEEECCSCT--TSEEEEEECGGG-T
T ss_pred CEEEEEeCC--------CCEEEEEC--CCCEEEEeec--CCCCccEEEECCCCCEEEEcCCCCc--ccceEEEEECCC-C
Confidence 889998321 57999999 7787776643 1112234444445679988543211 113355555432 2
Q ss_pred EE---ecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCce
Q 013264 246 WR---MLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 246 W~---~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
+. .++.+..+ .++++. ++.||+.-.. ...+++||+.+++-
T Consensus 218 ~~~~~~~~~~~~P----~giavd~~~G~lyv~d~~--------~~~V~~~d~~~g~~ 262 (433)
T 4hw6_A 218 FTERLSLCNARGA----KTCAVHPQNGKIYYTRYH--------HAMISSYDPATGTL 262 (433)
T ss_dssp TCCEEEEEECSSB----CCCEECTTTCCEEECBTT--------CSEEEEECTTTCCE
T ss_pred eeccccccccCCC----CEEEEeCCCCeEEEEECC--------CCEEEEEECCCCeE
Confidence 21 22222222 234443 5789986431 23799999987765
No 292
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=29.36 E-value=3.2e+02 Score=24.68 Aligned_cols=72 Identities=7% Similarity=-0.010 Sum_probs=33.9
Q ss_pred CCc-EEEEEeccCCCCCCCCeEEEEECC-CCcEEec----CCCC-ccCCcceEEEE---ECCEEEEEeCCCCCCCCcccC
Q 013264 216 GAS-TVCVAGGHDGQKNALKSAEVYDVE-ADEWRML----PEMD-EERDECQGVCL---EGDRFFVVSGYGTESQGRFKP 285 (446)
Q Consensus 216 ~d~-~iyv~GG~~~~~~~~~~~~~yd~~-t~~W~~~----~~~~-~~r~~~~~~~~---~~~~lyv~GG~~~~~~~~~~~ 285 (446)
.|+ .||+..... .......+.+||.. +++.+.+ +... .++. .+..- .++.||+.+.. .+
T Consensus 264 pdG~~l~v~~~~~-~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~--~a~sp~~~dg~~l~v~~~~--------~~ 332 (365)
T 1jof_A 264 FSGKYMFASSRAN-KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHS--NAVSPCPWSDEWMAITDDQ--------EG 332 (365)
T ss_dssp TTSSEEEEEEEES-STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTC--CCEEECTTCTTEEEEECSS--------SC
T ss_pred CCCCEEEEECCCC-CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCccc--ceecCCCcCCCEEEEEEcC--------CC
Confidence 344 577654221 11112378889875 5665532 1111 1221 12222 24567765432 23
Q ss_pred cEEEEeCCCCceE
Q 013264 286 DAECYDPKTGSWS 298 (446)
Q Consensus 286 ~v~~yd~~~~~W~ 298 (446)
.+.+|+.+.+.=+
T Consensus 333 ~v~v~~~~~~~l~ 345 (365)
T 1jof_A 333 WLEIYRWKDEFLH 345 (365)
T ss_dssp EEEEEEEETTEEE
T ss_pred eEEEEEEchhhCc
Confidence 6778877666433
No 293
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=28.88 E-value=4e+02 Score=25.63 Aligned_cols=113 Identities=12% Similarity=0.115 Sum_probs=61.6
Q ss_pred CCccceEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--cE-EEcc---CCcc--CccceEEEEEC-CcEEEE
Q 013264 153 IPMFCQCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--RW-RRVK---PMSV--ARSFFACAVVG-ASTVCV 222 (446)
Q Consensus 153 ~p~~~~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~W-~~~~---~~p~--~r~~~~~~~~~-d~~iyv 222 (446)
+|....++... .++++|+|=|. .+|+|+. .+. .+ +.+. -+|. .... ++.... ++++|+
T Consensus 305 LP~~iDAa~~~~~~g~~~fFKg~---------~~W~~~~--~~~~~gyP~~i~~~~g~P~~~~~ID-AA~~~~~~~k~yf 372 (450)
T 1su3_A 305 LPNGLEAAYEFADRDEVRFFKGN---------KYWAVQG--QNVLHGYPKDIYSSFGFPRTVKHID-AALSEENTGKTYF 372 (450)
T ss_dssp SCSSCCEEEEEGGGTEEEEEETT---------EEEEEET--TEECTTCSEEHHHHHCCCTTCCCCC-EEEEETTTTEEEE
T ss_pred CCCCeeEEEEEcCCCeEEEEeCC---------EEEEecC--CcccCCCceeeehhhcCCCCCCccc-eEEEEcCCCeEEE
Confidence 33333444332 37999999652 5788876 221 01 1111 1121 1122 233332 389999
Q ss_pred EeccCCCCCCCCeEEEEECCCCcEEe-----c----CCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCC
Q 013264 223 AGGHDGQKNALKSAEVYDVEADEWRM-----L----PEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPK 293 (446)
Q Consensus 223 ~GG~~~~~~~~~~~~~yd~~t~~W~~-----~----~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~ 293 (446)
|-| +..|+||..+++-.. + +.+|... .++...++++|+|-|. ..+.||..
T Consensus 373 FkG--------~~yw~yd~~~~~~~~gYPk~I~~~fpgip~~i---DAA~~~~g~~YFFkg~----------~ywr~d~~ 431 (450)
T 1su3_A 373 FVA--------NKYWRYDEYKRSMDPGYPKMIAHDFPGIGHKV---DAVFMKDGFFYFFHGT----------RQYKFDPK 431 (450)
T ss_dssp EET--------TEEEEEETTTTEECSSCSEEHHHHSTTSCSCC---SEEEEETTEEEEEETT----------EEEEEETT
T ss_pred EeC--------CEEEEEeCCCccccCCCCcchhhcCCCCCCCc---cEEEEcCCeEEEEeCC----------EEEEEECC
Confidence 976 578999976543221 1 1222211 3444578999999773 57899988
Q ss_pred CCceE
Q 013264 294 TGSWS 298 (446)
Q Consensus 294 ~~~W~ 298 (446)
+.+=.
T Consensus 432 ~~~v~ 436 (450)
T 1su3_A 432 TKRIL 436 (450)
T ss_dssp TTEEE
T ss_pred cceEe
Confidence 76544
No 294
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=26.36 E-value=3.7e+02 Score=24.43 Aligned_cols=140 Identities=12% Similarity=0.078 Sum_probs=76.6
Q ss_pred EEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc--cCCccCccceEEEEE-CCcEEEEEeccCCCCCCCC
Q 013264 159 CVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV--KPMSVARSFFACAVV-GASTVCVAGGHDGQKNALK 234 (446)
Q Consensus 159 ~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~--~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~ 234 (446)
..++. .++.||+.-.. .+.++++++ ....-+.+ ..+..| .++++- .++.||+.--.. ..
T Consensus 120 glavd~~~g~ly~~d~~-------~~~I~~~~~--dG~~~~~l~~~~l~~P---~~iavdp~~g~ly~td~~~-----~~ 182 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSG-------TSRIEVANL--DGAHRKVLLWQSLEKP---RAIALHPMEGTIYWTDWGN-----TP 182 (349)
T ss_dssp EEEEETTTTEEEEEETT-------TTEEEEEET--TSCSCEEEECTTCSCE---EEEEEETTTTEEEEEECSS-----SC
T ss_pred EEEEecCCCeEEEEcCC-------CCeEEEEcC--CCCceEEEEeCCCCCc---ceEEEecCcCeEEEeccCC-----CC
Confidence 34443 47899998542 347899998 54443333 222333 233443 137999984321 26
Q ss_pred eEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCCC
Q 013264 235 SAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSPR 312 (446)
Q Consensus 235 ~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~r 312 (446)
.++++|.....-+.+..-. .....++++. +++||+.-.. .+.|+++|+....=..+... .. .
T Consensus 183 ~I~r~~~dG~~~~~~~~~~--~~~PnGla~d~~~~~lY~aD~~--------~~~I~~~~~dG~~~~~~~~~---~~---~ 246 (349)
T 3v64_C 183 RIEASSMDGSGRRIIADTH--LFWPNGLTIDYAGRRMYWVDAK--------HHVIERANLDGSHRKAVISQ---GL---P 246 (349)
T ss_dssp EEEEEETTSCSCEESCCSS--CSCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEECS---SC---S
T ss_pred EEEEEeCCCCCcEEEEECC--CCCcceEEEeCCCCEEEEEECC--------CCEEEEEeCCCCceEEEEeC---CC---C
Confidence 8999998765444442211 1112455654 7899998542 34799999875433333211 11 1
Q ss_pred CceEEEEecCCCcccEEEEEcCCC
Q 013264 313 GSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 313 ~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
.-.+.++..+ .||+..-..
T Consensus 247 ~P~giav~~~-----~ly~td~~~ 265 (349)
T 3v64_C 247 HPFAITVFED-----SLYWTDWHT 265 (349)
T ss_dssp SEEEEEEETT-----EEEEEETTT
T ss_pred CceEEEEECC-----EEEEecCCC
Confidence 2234455444 899885443
No 295
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=25.99 E-value=2.9e+02 Score=23.05 Aligned_cols=134 Identities=7% Similarity=0.128 Sum_probs=68.2
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCC--cE-EEc----cCCccCccceEEEEECCcEEEEEeccCCCCCCCCe
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSS--RW-RRV----KPMSVARSFFACAVVGASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~--~W-~~~----~~~p~~r~~~~~~~~~d~~iyv~GG~~~~~~~~~~ 235 (446)
...+++|+|-|. .+|+++. ... .. +.+ +.+|. ... |+....++++|++-| +.
T Consensus 13 ~~~g~~~fFkg~---------~~w~~~~--~~~~~gyP~~I~~~w~glP~-~iD-Aa~~~~~g~~yfFkg--------~~ 71 (196)
T 3c7x_A 13 MLRGEMFVFKER---------WFWRVRN--NQVMDGYPMPIGQFWRGLPA-SIN-TAYERKDGKFVFFKG--------DK 71 (196)
T ss_dssp EETTEEEEEETT---------EEEEEET--TEECTTCSEEHHHHSTTCCS-SCC-EEEECTTSCEEEEET--------TE
T ss_pred EcCCEEEEEECC---------EEEEEEC--CccCCCCceEhhHhccCCCC-Ccc-EEEEeCCCcEEEecC--------CE
Confidence 478999999763 4777765 210 00 111 23333 222 222223478999976 46
Q ss_pred EEEEECCCCcE---EecC----CCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEE-----cc
Q 013264 236 AEVYDVEADEW---RMLP----EMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSK-----FD 301 (446)
Q Consensus 236 ~~~yd~~t~~W---~~~~----~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~-----~~ 301 (446)
.++||..+... ..+. .+|...- -++... ++++|++-|. ..+.||..+++-.. +.
T Consensus 72 yw~~~~~~~~~gyPk~I~~~~~glP~~~I--DAA~~~~~~g~~yfFkG~----------~yw~yd~~~~~v~~gyPk~i~ 139 (196)
T 3c7x_A 72 HWVFDEASLEPGYPKHIKELGRGLPTDKI--DAALFWMPNGKTYFFRGN----------KYYRFNEELRAVDSEYPKNIK 139 (196)
T ss_dssp EEEEETTEECTTCSEEGGGTCBSCCSSCC--SEEEEETTTTEEEEEETT----------EEEEEETTTTEECTTCSEEGG
T ss_pred EEEEeCCcccCCCCeEhhhcCCCCCCCcc--cEEEEEccCCEEEEEECC----------EEEEEeCCcccccCCCCccHH
Confidence 78888542110 0121 2332222 233333 6899999773 57899987753211 11
Q ss_pred cCCCCCCCCCCCceEEEEecCCCcccEEEEEcCCC
Q 013264 302 HVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKEQ 336 (446)
Q Consensus 302 ~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~~ 336 (446)
.++ ..+..-.++....+ .+++|.|-|..
T Consensus 140 -~~~---gip~~idaAf~~~~---~~~~YfFkg~~ 167 (196)
T 3c7x_A 140 -VWE---GIPESPRGSFMGSD---EVFTYFYKGNK 167 (196)
T ss_dssp -GSB---TCCSSCSEEEECTT---SSEEEEEETTE
T ss_pred -HCC---CcCCCcceeEEecC---CCEEEEEECCE
Confidence 111 12223334444433 13899998753
No 296
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=25.89 E-value=3.4e+02 Score=23.89 Aligned_cols=149 Identities=13% Similarity=0.079 Sum_probs=74.2
Q ss_pred ceeEEEEECCCCcEEecCCCCCCCCccceEEEEeeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccCccc
Q 013264 130 QYGLTIFNASNGTWERIRPHVGRIPMFCQCVAVPASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSF 209 (446)
Q Consensus 130 ~~~~~~ydp~~~~W~~l~~~~~~~p~~~~~~~~~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~ 209 (446)
...++.+|..+++-..+ . ........-+++.+++....... ....++++|. .+.+.+.+...+.
T Consensus 42 ~~~l~~~d~~~~~~~~l---~-----~~~~~~~SpDg~~la~~~~~~~~--~~~~l~~~~~--~~g~~~~l~~~~~---- 105 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---E-----NATMPRISPDGKKIAFMRANEEK--KVSEIWVADL--ETLSSKKILEAKN---- 105 (347)
T ss_dssp EEEEEEEETTTCCEEEE---E-----SCEEEEECTTSSEEEEEEEETTT--TEEEEEEEET--TTTEEEEEEEESE----
T ss_pred cceEEEEeCCCCceEEc---c-----cCCCeEECCCCCEEEEEEeccCC--CcceEEEEEC--CCCceEEEEcCCC----
Confidence 34577888888776655 1 01222332345433333322110 1346999999 7777766644332
Q ss_pred eEEEEE-CCc-EEEEEeccC-C--------------CC-----CCCCeEEEEECCCCcE-EecCCCCccCCcceEEEEEC
Q 013264 210 FACAVV-GAS-TVCVAGGHD-G--------------QK-----NALKSAEVYDVEADEW-RMLPEMDEERDECQGVCLEG 266 (446)
Q Consensus 210 ~~~~~~-~d~-~iyv~GG~~-~--------------~~-----~~~~~~~~yd~~t~~W-~~~~~~~~~r~~~~~~~~~~ 266 (446)
.....+ .|+ +|++..... . .+ .....++++|..+++- ..+.. + .. ...+...
T Consensus 106 ~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~---~~-~~~~~sp 180 (347)
T 2gop_A 106 IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P---RF-SSGIWHR 180 (347)
T ss_dssp EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E---TT-CEEEEET
T ss_pred ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C---Cc-ccccCCC
Confidence 222233 234 454443210 0 00 0135789999999887 66654 3 22 3444444
Q ss_pred CEEEEEeCCCCCCCCcc-cCcEEEEeCCCCceEEcc
Q 013264 267 DRFFVVSGYGTESQGRF-KPDAECYDPKTGSWSKFD 301 (446)
Q Consensus 267 ~~lyv~GG~~~~~~~~~-~~~v~~yd~~~~~W~~~~ 301 (446)
+.+++.+.......... ...++.+| ++++..+.
T Consensus 181 dg~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 181 DKIVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp TEEEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred CeEEEEEecccccccccccccEEEeC--CCceEEec
Confidence 44555554322110001 34688888 77777665
No 297
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=25.77 E-value=2.9e+02 Score=28.38 Aligned_cols=88 Identities=16% Similarity=0.249 Sum_probs=49.3
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCC-CCcccCcEEEEeCCCCceEEcccCCCCCCC--CCCCceEEE
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTES-QGRFKPDAECYDPKTGSWSKFDHVWPFPSL--SPRGSTATI 318 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~-~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~--~~r~~~~~~ 318 (446)
-.+|+.+..+|..... +.+++. ++.+|+..+-.... .+.....+++++-...+|+.+... +.. ..+.+.+.+
T Consensus 231 G~tW~~~~~~p~~~~~-~~~~~~~~~~l~~~~~d~~g~y~~~~~g~v~~s~d~G~tW~~i~~~---~~~~~~~~~~~~~i 306 (737)
T 2cn3_A 231 GVTWKAVPGQPKGLLP-HHGVLASNGMLYITYGDTCGPYDGNGKGQVWKFNTRTGEWIDITPI---PYSSSDNRFCFAGL 306 (737)
T ss_dssp TSCCEECTTCCCSSEE-EEEEECTTSEEEEEEESSCCSSCCSCCEEEEEEETTTCCEEECCSS---CTTSTTCCSEEEEE
T ss_pred CCceEECCCCCCcccc-eEEEECCCCeEEEEecCCCCccccccCceEEEEeCCCCCEEEccCC---CCCCcccccccccE
Confidence 4589999877654332 333333 67899875421100 000234688999999999999742 111 223444444
Q ss_pred EecCCCcccEEEEEcCC
Q 013264 319 TSYRLQQHQWLWFLGKE 335 (446)
Q Consensus 319 ~~~~~~~~~~lyv~GG~ 335 (446)
.++. ...+.||+.+..
T Consensus 307 ~v~p-~~~~~ly~~~~~ 322 (737)
T 2cn3_A 307 AVDR-QNPDIIMVTSMN 322 (737)
T ss_dssp EECT-TCTTCEEEEEEC
T ss_pred EEcC-CCCCEEEEEecc
Confidence 4432 112578888654
No 298
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=25.76 E-value=3.5e+02 Score=23.88 Aligned_cols=16 Identities=13% Similarity=0.291 Sum_probs=11.6
Q ss_pred eEEEEECCEEEEEeCC
Q 013264 260 QGVCLEGDRFFVVSGY 275 (446)
Q Consensus 260 ~~~~~~~~~lyv~GG~ 275 (446)
|++++-++++|.+|-.
T Consensus 74 hs~~l~~G~v~~wG~n 89 (282)
T 3qhy_B 74 HSLALKDGEVIAWGGN 89 (282)
T ss_dssp EEEEEETTEEEEEECC
T ss_pred EEEEEECCEEEEeeCC
Confidence 5566668888888864
No 299
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=25.05 E-value=4.2e+02 Score=24.64 Aligned_cols=107 Identities=9% Similarity=-0.011 Sum_probs=60.7
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEc-c-CCccCccceEEEEE-CCcEEEEEeccCCCCCCCCeEEEEE
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRV-K-PMSVARSFFACAVV-GASTVCVAGGHDGQKNALKSAEVYD 240 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~-~-~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~~~~yd 240 (446)
.++.||+.--. ....++++++ ....-+.+ . .+.. -.++++- .+++||++-. ....++++|
T Consensus 212 ~~g~ly~td~~------~~~~I~~~~~--dG~~~~~~~~~~l~~---P~glavd~~~~~lY~aD~------~~~~I~~~d 274 (400)
T 3p5b_L 212 VHGFMYWTDWG------TPAKIKKGGL--NGVDIYSLVTENIQW---PNGITLDLLSGRLYWVDS------KLHSISSID 274 (400)
T ss_dssp TTTEEEEEECS------SSCCEEEEET--TSCSCEEEECSSCSC---EEEEEEETTTTEEEEEET------TTTEEEEEE
T ss_pred ccCeEEEEeCC------CCCEEEEEeC--CCCccEEEEECCCCc---eEEEEEEeCCCEEEEEEC------CCCEEEEEe
Confidence 36889887421 1246889988 43332332 1 1211 2344444 2379999832 237899999
Q ss_pred CCCCcEEecCCCCccCCcceEEEEECCEEEEEeCCCCCCCCcccCcEEEEeCCCC
Q 013264 241 VEADEWRMLPEMDEERDECQGVCLEGDRFFVVSGYGTESQGRFKPDAECYDPKTG 295 (446)
Q Consensus 241 ~~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~ 295 (446)
.....-+.+...+.......++++.++.||+.--. ...|.++|..++
T Consensus 275 ~dG~~~~~~~~~~~~l~~P~gl~v~~~~lywtd~~--------~~~V~~~~~~~G 321 (400)
T 3p5b_L 275 VNGGNRKTILEDEKRLAHPFSLAVFEDKVFWTDII--------NEAIFSANRLTG 321 (400)
T ss_dssp TTSCCCEEEEECSSTTSSEEEEEEETTEEEEEESS--------SCSEEEEESSSC
T ss_pred CCCCccEEEEeCCCCCCCCEEEEEeCCEEEEecCC--------CCeEEEEEcCCC
Confidence 87543333322111111225778889999998632 247899996555
No 300
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=24.97 E-value=2.2e+02 Score=24.39 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=30.6
Q ss_pred EEEE-ECCEEEEEeCCCCCCCCcccCcEEEEeCCCCce--EEcccCCCCCCCCCCCceEEEEecCCCcccEEEEEcCC
Q 013264 261 GVCL-EGDRFFVVSGYGTESQGRFKPDAECYDPKTGSW--SKFDHVWPFPSLSPRGSTATITSYRLQQHQWLWFLGKE 335 (446)
Q Consensus 261 ~~~~-~~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W--~~~~~~~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~ 335 (446)
+++. .++++|+|-|. ..+.++.....+ ..+...+|. +|. .--++...++ ++|+|-|.
T Consensus 22 Ai~~~~~g~~yfFkg~----------~~Wr~~~~~~~~~p~~Is~~wpg-LP~--~IDAA~~~~~-----~~yfFkG~ 81 (219)
T 1hxn_A 22 AMVSDNHGATYVFSGS----------HYWRLDTNRDGWHSWPIAHQWPQ-GPS--TVDAAFSWED-----KLYLIQDT 81 (219)
T ss_dssp EEEECTTSCEEEEETT----------EEEESSSSSCTTCCEEGGGTCTT-SCS--SCSEEEEETT-----EEEEEETT
T ss_pred EEEECCCCcEEEEeCC----------EEEEEcCCCCCCCceEhhhhccC-CCC--CccEEEEECC-----cEEEecCC
Confidence 3443 57899999773 456666543332 234434442 332 2223333444 99999774
No 301
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=24.13 E-value=5.2e+02 Score=25.39 Aligned_cols=111 Identities=6% Similarity=0.043 Sum_probs=58.1
Q ss_pred eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEccCCccC-ccceEEEEECCcEEEEEeccCCCCCCCCeEEEEECC
Q 013264 164 ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVKPMSVA-RSFFACAVVGASTVCVAGGHDGQKNALKSAEVYDVE 242 (446)
Q Consensus 164 ~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~-r~~~~~~~~~d~~iyv~GG~~~~~~~~~~~~~yd~~ 242 (446)
-++..++.|+.+ ..+.++|. .+.+....-..... ......+... +..++.++.+ ..+.+||+.
T Consensus 249 pdg~~l~s~s~D-------~~v~lWd~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d------~~i~~~~~~ 312 (611)
T 1nr0_A 249 PDGTKIASASAD-------KTIKIWNV--ATLKVEKTIPVGTRIEDQQLGIIWT-KQALVSISAN------GFINFVNPE 312 (611)
T ss_dssp TTSSEEEEEETT-------SEEEEEET--TTTEEEEEEECCSSGGGCEEEEEEC-SSCEEEEETT------CCEEEEETT
T ss_pred CCCCEEEEEeCC-------CeEEEEeC--CCCceeeeecCCCCccceeEEEEEc-CCEEEEEeCC------CcEEEEeCC
Confidence 466777777754 36889999 66665432211111 1112223334 4555665543 356788887
Q ss_pred CCcEEecCCCCccCCcceEEEEE-CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEc
Q 013264 243 ADEWRMLPEMDEERDECQGVCLE-GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKF 300 (446)
Q Consensus 243 t~~W~~~~~~~~~r~~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~ 300 (446)
+.+-...- ........++++. +++..+.|+.++ .+..+|..++.-..+
T Consensus 313 ~~~~~~~~--~gh~~~v~~l~~spdg~~l~s~s~D~--------~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 313 LGSIDQVR--YGHNKAITALSSSADGKTLFSADAEG--------HINSWDISTGISNRV 361 (611)
T ss_dssp TTEEEEEE--CCCSSCEEEEEECTTSSEEEEEETTS--------CEEEEETTTCCEEEC
T ss_pred CCCcceEE--cCCCCCEEEEEEeCCCCEEEEEeCCC--------cEEEEECCCCceeee
Confidence 76532211 1111111233332 456666666542 688999988766543
No 302
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=23.59 E-value=1.8e+02 Score=27.10 Aligned_cols=89 Identities=8% Similarity=0.105 Sum_probs=51.0
Q ss_pred eCCEEEEEeCcC-CCCCCccCeEEEEeCcCCCCcEEEccCCccCccceEEEEECCc-EEEEEeccCCCCCCCCeEEEEEC
Q 013264 164 ASRKLLLIGGWD-PITLEPVPDVYVLDMVNNSSRWRRVKPMSVARSFFACAVVGAS-TVCVAGGHDGQKNALKSAEVYDV 241 (446)
Q Consensus 164 ~~~~lyv~GG~~-~~~~~~~~~v~~~d~~~~t~~W~~~~~~p~~r~~~~~~~~~d~-~iyv~GG~~~~~~~~~~~~~yd~ 241 (446)
.++++||.-... +......+.+.++|+ .++ +.+..++.+..-+++++..|+ ++|+..+.. .+++.++|.
T Consensus 274 dg~~lyV~~~~~~~~~~~~~~~~~ViD~--~t~--~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~-----~~~VsVID~ 344 (368)
T 1mda_H 274 NTDGIMILTVEHSRSCLAAAENTSSVTA--SVG--QTSGPISNGHDSDAIIAAQDGASDNYANSAG-----TEVLDIYDA 344 (368)
T ss_dssp TTTEEEEEEEECSSCTTSCEEEEEEEES--SSC--CEEECCEEEEEECEEEECCSSSCEEEEEETT-----TTEEEEEES
T ss_pred CCCEEEEEeccccCcccccCCCEEEEEC--CCC--eEEEEEECCCCcceEEECCCCCEEEEEccCC-----CCeEEEEEC
Confidence 457899853200 000001234569999 554 456666666666677666555 478776521 268999997
Q ss_pred CCCcEEecCCCCccCCcceEEEE
Q 013264 242 EADEWRMLPEMDEERDECQGVCL 264 (446)
Q Consensus 242 ~t~~W~~~~~~~~~r~~~~~~~~ 264 (446)
.| |+.+...+..+.- .++++
T Consensus 345 ~t--~kvv~~I~vg~~P-~~i~~ 364 (368)
T 1mda_H 345 AS--DQDQSSVELDKGP-ESLSV 364 (368)
T ss_dssp SS--CEEEEECCCCSCC-CEEEC
T ss_pred CC--CcEEEEEECCCCC-CEEEe
Confidence 65 5555666655543 44444
No 303
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=23.44 E-value=3.5e+02 Score=24.24 Aligned_cols=129 Identities=9% Similarity=0.059 Sum_probs=65.1
Q ss_pred EEEEeeCCEEEEEeCc-CCCCCCccCeEEEEeCcCCCCcEEEccCC---c-cC-ccceEEEEECCcEEEEEeccCCCCCC
Q 013264 159 CVAVPASRKLLLIGGW-DPITLEPVPDVYVLDMVNNSSRWRRVKPM---S-VA-RSFFACAVVGASTVCVAGGHDGQKNA 232 (446)
Q Consensus 159 ~~~~~~~~~lyv~GG~-~~~~~~~~~~v~~~d~~~~t~~W~~~~~~---p-~~-r~~~~~~~~~d~~iyv~GG~~~~~~~ 232 (446)
.+++..++++|+.... ... . ..++.++- .+-...|.. . .. ..-+++++-.+++|||+.-... ...
T Consensus 21 ~va~~~~g~~~v~~~~~~~~---~-~~l~~~~~----g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~-~~~ 91 (343)
T 2qe8_A 21 NITLTPDGRLFLSLHQFYQP---E-MQVAELTQ----DGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQ-SKS 91 (343)
T ss_dssp EEEECTTSCEEEEECGGGCC---S-CSEEEEET----TEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHH-HTS
T ss_pred eEEECCCCCEEEEeCCCCCC---c-eEEEEECC----CCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCC-cCC
Confidence 3444447889887532 111 1 35666652 222322221 0 11 1223444444589999852110 001
Q ss_pred CCeEEEEECCCCcEEecCCCC----ccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCc-eEEcc
Q 013264 233 LKSAEVYDVEADEWRMLPEMD----EERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGS-WSKFD 301 (446)
Q Consensus 233 ~~~~~~yd~~t~~W~~~~~~~----~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~-W~~~~ 301 (446)
...+.+||+.+++-...-.++ .+......+++. ++.+|+..... .....+.+||+.+++ |..+.
T Consensus 92 ~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~-----~~~~~i~v~d~~~g~~~r~~~ 162 (343)
T 2qe8_A 92 VPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP-----DDKAALIRVDLQTGLAARVLQ 162 (343)
T ss_dssp CCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS-----GGGCEEEEEETTTCCEEEECT
T ss_pred CCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc-----CCCCeEEEEECCCCCEEEEec
Confidence 257899999988743221221 111112455665 57899974310 023479999998664 65553
No 304
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=22.87 E-value=4e+02 Score=23.65 Aligned_cols=141 Identities=11% Similarity=-0.004 Sum_probs=76.4
Q ss_pred eEEEEe-eCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc--CCccCccceEEEEE-CCcEEEEEeccCCCCCCC
Q 013264 158 QCVAVP-ASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK--PMSVARSFFACAVV-GASTVCVAGGHDGQKNAL 233 (446)
Q Consensus 158 ~~~~~~-~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~--~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~ 233 (446)
...++. .++.||+.-.. .+.+.++|+ ....-+.+. .+..| .++++- .++.||+..-. ..
T Consensus 80 ~glavd~~~~~ly~~d~~-------~~~I~~~~~--~g~~~~~~~~~~~~~P---~~iavdp~~g~ly~~d~~-----~~ 142 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDSV-------LGTVSVADT--KGVKRKTLFRENGSKP---RAIVVDPVHGFMYWTDWG-----TP 142 (316)
T ss_dssp CEEEEETTTTEEEEEETT-------TTEEEEEET--TSSSEEEEEECTTCCE---EEEEEETTTTEEEEEECS-----SS
T ss_pred CEEEEeecCCeEEEEECC-------CCEEEEEeC--CCCceEEEEECCCCCc---ceEEeCCCCCEEEEEccC-----CC
Confidence 344443 47899998432 347889998 544433332 23222 234443 24899998521 12
Q ss_pred CeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEEcccCCCCCCCCC
Q 013264 234 KSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSKFDHVWPFPSLSP 311 (446)
Q Consensus 234 ~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~~~ 311 (446)
..++++++....=+.+..... ....++++. +++||+.-.. .+.|+++|+....=+.+... ....
T Consensus 143 ~~I~~~~~dG~~~~~~~~~~~--~~P~gla~d~~~~~lY~~D~~--------~~~I~~~d~dg~~~~~~~~~----~~~~ 208 (316)
T 1ijq_A 143 AKIKKGGLNGVDIYSLVTENI--QWPNGITLDLLSGRLYWVDSK--------LHSISSIDVNGGNRKTILED----EKRL 208 (316)
T ss_dssp CEEEEEETTSCCEEEEECSSC--SCEEEEEEETTTTEEEEEETT--------TTEEEEEETTSCSCEEEEEC----TTTT
T ss_pred CeEEEEcCCCCCeEEEEECCC--CCceEEEEeccCCEEEEEECC--------CCeEEEEecCCCceEEEeec----CCcc
Confidence 578999986544333321111 112455665 6799998542 34799999975433333210 0111
Q ss_pred CCceEEEEecCCCcccEEEEEcC
Q 013264 312 RGSTATITSYRLQQHQWLWFLGK 334 (446)
Q Consensus 312 r~~~~~~~~~~~~~~~~lyv~GG 334 (446)
..-.+.++.++ .||+.--
T Consensus 209 ~~P~giav~~~-----~ly~~d~ 226 (316)
T 1ijq_A 209 AHPFSLAVFED-----KVFWTDI 226 (316)
T ss_dssp SSEEEEEEETT-----EEEEEET
T ss_pred CCcEEEEEECC-----EEEEEEC
Confidence 22334455444 8998764
No 305
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=22.73 E-value=4.3e+02 Score=23.99 Aligned_cols=70 Identities=13% Similarity=0.185 Sum_probs=41.5
Q ss_pred cEEEEEeccCC----CCCCCCeEEEEECCCCcEEecCCCCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEe
Q 013264 218 STVCVAGGHDG----QKNALKSAEVYDVEADEWRMLPEMDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYD 291 (446)
Q Consensus 218 ~~iyv~GG~~~----~~~~~~~~~~yd~~t~~W~~~~~~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd 291 (446)
+++||....+. .......+.++|..+.+ .+..++... - .++++. +..||+.++ +.|.+||
T Consensus 266 ~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~~~-p-~~ia~spdg~~l~v~n~----------~~v~v~D 331 (361)
T 2oiz_A 266 GRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPGRD-A-LSMTIDQQRNLMLTLDG----------GNVNVYD 331 (361)
T ss_dssp TEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEECTT-C-CEEEEETTTTEEEEECS----------SCEEEEE
T ss_pred CeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEecCC-e-eEEEECCCCCEEEEeCC----------CeEEEEE
Confidence 79999864221 11124689999988875 333333333 2 455544 447776543 3799999
Q ss_pred CCCCceEEcc
Q 013264 292 PKTGSWSKFD 301 (446)
Q Consensus 292 ~~~~~W~~~~ 301 (446)
+++++-+.+.
T Consensus 332 ~~t~~l~~~~ 341 (361)
T 2oiz_A 332 ISQPEPKLLR 341 (361)
T ss_dssp CSSSSCEEEE
T ss_pred CCCCcceeeE
Confidence 9887324443
No 306
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=21.52 E-value=4.9e+02 Score=24.11 Aligned_cols=135 Identities=7% Similarity=0.041 Sum_probs=66.1
Q ss_pred eeCCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcE--EEc----cCCccCccceEEEEE-CCcEEEEEeccCCCCCCCCe
Q 013264 163 PASRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRW--RRV----KPMSVARSFFACAVV-GASTVCVAGGHDGQKNALKS 235 (446)
Q Consensus 163 ~~~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W--~~~----~~~p~~r~~~~~~~~-~d~~iyv~GG~~~~~~~~~~ 235 (446)
..++++|+|=|. .+|+++. ....- ..+ +.+|. ... ++... .++++|+|-| +.
T Consensus 188 ~~~g~~~fFkg~---------~~Wr~~~--~~~~~~p~~I~~~wpgLP~-~iD-Aa~~~~~~g~~~fFkg--------~~ 246 (365)
T 3ba0_A 188 TVGNKIFFFKDR---------FFWLKVS--ERPKTSVNLISSLWPTLPS-GIE-AAYEIEARNQVFLFKD--------DK 246 (365)
T ss_dssp EETTEEEEEETT---------EEEECCS--SCCCCCEEEHHHHCSSCCS-SCC-EEEEEGGGTEEEEEET--------TE
T ss_pred EcCCeEEEEeCC---------EEEEEcC--CCccCCccchhhhccCCCC-Ccc-EEEEecCCCEEEEEeC--------CE
Confidence 368999999652 4667665 22211 111 22331 122 33333 1379999976 45
Q ss_pred EEEEECCCCc--E-EecCC--CCccCCcceEEEEE--CCEEEEEeCCCCCCCCcccCcEEEEeCCCCceEE-----cccC
Q 013264 236 AEVYDVEADE--W-RMLPE--MDEERDECQGVCLE--GDRFFVVSGYGTESQGRFKPDAECYDPKTGSWSK-----FDHV 303 (446)
Q Consensus 236 ~~~yd~~t~~--W-~~~~~--~~~~r~~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~v~~yd~~~~~W~~-----~~~~ 303 (446)
.|+|+..+.. + ..+.. +|......-++... ++++|+|-|. ..++||..+++-.. +...
T Consensus 247 yWr~~~~~~~~gyPk~I~~~GlP~~~~~IDAA~~~~~~~~~yfFkG~----------~yw~yd~~~~~v~~gyPk~I~~~ 316 (365)
T 3ba0_A 247 YWLISNLRPEPNYPKSIHSFGFPNFVKKIDAAVFNPRFYRTYFFVDN----------QYWRYDERRQMMDPGYPKLITKN 316 (365)
T ss_dssp EEECSTTSCTTTCSEETTTTTCCTTCCCCCEEEEETTTTEEEEEETT----------EEEEEETTTTEECSSCCCCHHHH
T ss_pred EEEEcCCcccCCCCceeeeccCCCCCCCcCEEEEeCCCCEEEEEECC----------EEEEEeCCcceecCCCCcchhhc
Confidence 6666543211 1 12222 23211111233333 4799999773 67899987654221 1011
Q ss_pred CCCCCCCCCCceEEEEecCCCcccEEEEEcCC
Q 013264 304 WPFPSLSPRGSTATITSYRLQQHQWLWFLGKE 335 (446)
Q Consensus 304 ~p~~~~~~r~~~~~~~~~~~~~~~~lyv~GG~ 335 (446)
+|. .+..--++....+ +++|.|-|.
T Consensus 317 f~g---~p~~iDaA~~~~~----g~~YfFkg~ 341 (365)
T 3ba0_A 317 FQG---IGPKIDAVFYSKN----KYYYFFQGS 341 (365)
T ss_dssp STT---CCSSCSEEEEETT----TEEEEEETT
T ss_pred CCC---CCCccceeeEecC----CcEEEEeCC
Confidence 111 2223334444423 489999874
No 307
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.24 E-value=5e+02 Score=24.14 Aligned_cols=120 Identities=12% Similarity=0.049 Sum_probs=66.2
Q ss_pred eEEEEee-CCEEEEEeCcCCCCCCccCeEEEEeCcCCCCcEEEcc---CCccCccc-e-EEEEEC-CcEEEEEeccCCCC
Q 013264 158 QCVAVPA-SRKLLLIGGWDPITLEPVPDVYVLDMVNNSSRWRRVK---PMSVARSF-F-ACAVVG-ASTVCVAGGHDGQK 230 (446)
Q Consensus 158 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~v~~~d~~~~t~~W~~~~---~~p~~r~~-~-~~~~~~-d~~iyv~GG~~~~~ 230 (446)
+++++.- ++.||+... ...+++||+ .+.....+. ........ + .+++-. ++.||+.-..
T Consensus 222 ~~iav~p~~g~lyv~d~--------~~~I~~~d~--~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~---- 287 (409)
T 3hrp_A 222 GAVALDETEEWLYFVDS--------NKNFGRFNV--KTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQN---- 287 (409)
T ss_dssp CBCEECTTSSEEEEECT--------TCEEEEEET--TTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETT----
T ss_pred EEEEEeCCCCeEEEEEC--------CCcEEEEEC--CCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCC----
Confidence 3444434 789999421 236999999 666654441 11111222 2 555554 4899998432
Q ss_pred CCCCeEEEEECCCCcEEecCCC--Cc--------c-CCcceEEEEE-CCEEEEEeC-CCCCCCCcccCcEEEEeCCCCce
Q 013264 231 NALKSAEVYDVEADEWRMLPEM--DE--------E-RDECQGVCLE-GDRFFVVSG-YGTESQGRFKPDAECYDPKTGSW 297 (446)
Q Consensus 231 ~~~~~~~~yd~~t~~W~~~~~~--~~--------~-r~~~~~~~~~-~~~lyv~GG-~~~~~~~~~~~~v~~yd~~~~~W 297 (446)
...+.+||+....-...... +. . .....++++. ++.||+... . .+.|.+||+.++.-
T Consensus 288 --~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~--------~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 288 --LSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFK--------GYCLRKLDILDGYV 357 (409)
T ss_dssp --TTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTT--------TCEEEEEETTTTEE
T ss_pred --CCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCC--------CCEEEEEECCCCEE
Confidence 26789998875522222111 00 0 1112344444 467999854 2 23799999777776
Q ss_pred EEcc
Q 013264 298 SKFD 301 (446)
Q Consensus 298 ~~~~ 301 (446)
..+.
T Consensus 358 ~~~~ 361 (409)
T 3hrp_A 358 STVA 361 (409)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6554
No 308
>2b4w_A Hypothetical protein, conserved; structural genomics, PSI, protein structure initiative, structural genomics of pathogenic protozoa consortium; 1.98A {Leishmania major} SCOP: b.67.2.5
Probab=20.80 E-value=3.3e+02 Score=24.46 Aligned_cols=59 Identities=14% Similarity=0.261 Sum_probs=40.5
Q ss_pred EECCcEEEEEeccCCCC-CCCCeEEEEEC-CCCcEEecCCCCccCCcceEEEEECCEEEEEeCC
Q 013264 214 VVGASTVCVAGGHDGQK-NALKSAEVYDV-EADEWRMLPEMDEERDECQGVCLEGDRFFVVSGY 275 (446)
Q Consensus 214 ~~~d~~iyv~GG~~~~~-~~~~~~~~yd~-~t~~W~~~~~~~~~r~~~~~~~~~~~~lyv~GG~ 275 (446)
..+ |+.+++|-..... ...+.|.-|.- ..++|+.++.+...... .-.+-+++.| |+||.
T Consensus 38 ~~~-Gk~~I~GRVE~Rd~se~S~V~fFeet~~d~w~~v~~~~~~LqD-PF~t~I~gEl-i~GGv 98 (315)
T 2b4w_A 38 SYK-GKTHIYGRVEKRDIWAASHVRLFEETGKDEFTAVPELSWELED-PYIAKINNEM-IFGGT 98 (315)
T ss_dssp EET-TEEEEEEEEECTTCSSCCEEEEEEEEETTEEEECTTCCBSCEE-EEEEEETTEE-EEEEE
T ss_pred eEC-CEEEEEeeeecCCCccccEEEEEEEcCCCceEECCCCEEEecC-ccEEEECCEE-EeeeE
Confidence 345 8988888766554 24577877866 78999988884444444 5567788887 45664
Done!