Query 013268
Match_columns 446
No_of_seqs 429 out of 2017
Neff 8.9
Searched_HMMs 46136
Date Fri Mar 29 02:07:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013268.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/013268hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PRK13604 luxD acyl transferase 100.0 9.9E-27 2.2E-31 220.2 25.8 241 36-282 8-259 (307)
2 PLN02298 hydrolase, alpha/beta 99.9 1.3E-26 2.8E-31 227.8 22.2 255 36-292 31-327 (330)
3 PLN02385 hydrolase; alpha/beta 99.9 6.1E-26 1.3E-30 224.8 24.2 247 35-284 59-347 (349)
4 PHA02857 monoglyceride lipase; 99.9 8.9E-26 1.9E-30 216.1 23.6 237 42-282 5-273 (276)
5 KOG1455 Lysophospholipase [Lip 99.9 7.5E-26 1.6E-30 208.4 19.2 245 36-282 26-312 (313)
6 PRK10749 lysophospholipase L2; 99.9 5.7E-24 1.2E-28 209.0 26.8 242 36-282 29-329 (330)
7 KOG1552 Predicted alpha/beta h 99.9 1.7E-24 3.7E-29 195.8 18.6 218 36-285 34-255 (258)
8 PLN02652 hydrolase; alpha/beta 99.9 1.2E-23 2.6E-28 210.0 24.1 244 37-284 110-389 (395)
9 PRK00870 haloalkane dehalogena 99.9 2E-23 4.4E-28 202.6 23.9 243 33-282 17-301 (302)
10 TIGR02240 PHA_depoly_arom poly 99.9 1.9E-23 4.2E-28 200.1 22.2 229 43-283 7-267 (276)
11 KOG4391 Predicted alpha/beta h 99.9 3.2E-24 6.9E-29 186.9 14.5 249 7-284 29-284 (300)
12 PRK05077 frsA fermentation/res 99.9 1.3E-22 2.8E-27 204.2 28.6 235 33-283 164-413 (414)
13 COG1647 Esterase/lipase [Gener 99.9 5.4E-24 1.2E-28 187.0 15.6 213 65-280 14-242 (243)
14 PLN02511 hydrolase 99.9 2.1E-22 4.5E-27 201.7 27.6 270 15-287 42-370 (388)
15 COG2267 PldB Lysophospholipase 99.9 7.2E-23 1.6E-27 197.0 21.7 245 36-284 8-296 (298)
16 TIGR03343 biphenyl_bphD 2-hydr 99.9 3.3E-22 7.2E-27 191.7 25.4 211 65-280 29-281 (282)
17 PLN02824 hydrolase, alpha/beta 99.9 5.4E-22 1.2E-26 191.8 25.9 229 45-282 15-294 (294)
18 PRK03592 haloalkane dehalogena 99.9 2.8E-22 6E-27 193.9 22.4 228 45-284 14-291 (295)
19 PRK10566 esterase; Provisional 99.9 7.7E-22 1.7E-26 185.9 23.1 222 49-283 11-249 (249)
20 PRK10985 putative hydrolase; P 99.9 3.7E-21 8.1E-26 188.5 26.9 266 16-284 3-322 (324)
21 TIGR03611 RutD pyrimidine util 99.9 9.2E-22 2E-26 184.7 21.7 213 64-280 11-256 (257)
22 PRK06489 hypothetical protein; 99.9 3.6E-21 7.8E-26 191.4 25.6 247 36-283 35-358 (360)
23 COG1506 DAP2 Dipeptidyl aminop 99.9 6.4E-22 1.4E-26 209.2 21.0 239 35-285 363-619 (620)
24 PRK10673 acyl-CoA esterase; Pr 99.9 1.2E-21 2.6E-26 184.9 20.1 220 50-281 3-254 (255)
25 TIGR03056 bchO_mg_che_rel puta 99.9 6.8E-21 1.5E-25 181.7 24.2 229 42-280 10-278 (278)
26 PLN03087 BODYGUARD 1 domain co 99.9 1.1E-20 2.3E-25 191.6 26.7 235 41-281 179-478 (481)
27 PLN02965 Probable pheophorbida 99.9 3.3E-21 7.2E-26 182.4 21.7 212 68-282 5-253 (255)
28 PLN02578 hydrolase 99.9 9.7E-21 2.1E-25 187.9 25.8 223 44-280 72-353 (354)
29 PLN02679 hydrolase, alpha/beta 99.9 1.3E-20 2.8E-25 187.3 26.6 230 46-282 69-357 (360)
30 PRK10349 carboxylesterase BioH 99.9 9E-21 2E-25 179.4 21.3 205 66-280 13-254 (256)
31 TIGR01607 PST-A Plasmodium sub 99.9 6.8E-21 1.5E-25 187.0 21.0 234 42-280 2-331 (332)
32 TIGR01250 pro_imino_pep_2 prol 99.9 6.3E-20 1.4E-24 174.9 27.0 229 44-280 8-288 (288)
33 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.8E-20 3.8E-25 174.6 21.8 211 65-280 12-251 (251)
34 PRK03204 haloalkane dehalogena 99.9 4.3E-20 9.2E-25 177.9 25.1 223 45-279 21-285 (286)
35 PRK07581 hypothetical protein; 99.9 1.7E-20 3.7E-25 185.1 22.2 235 46-284 24-338 (339)
36 KOG4178 Soluble epoxide hydrol 99.9 9.8E-21 2.1E-25 177.4 19.1 237 39-282 23-320 (322)
37 TIGR01738 bioH putative pimelo 99.9 1.5E-20 3.2E-25 174.6 20.0 204 66-279 4-245 (245)
38 PF12697 Abhydrolase_6: Alpha/ 99.9 9.8E-21 2.1E-25 173.3 17.7 202 69-273 1-227 (228)
39 PLN02894 hydrolase, alpha/beta 99.9 1.1E-19 2.4E-24 182.7 26.9 222 64-287 103-390 (402)
40 TIGR01249 pro_imino_pep_1 prol 99.9 1.3E-19 2.9E-24 176.2 26.2 233 41-283 8-306 (306)
41 TIGR03100 hydr1_PEP hydrolase, 99.9 7.1E-20 1.5E-24 175.1 22.5 236 38-280 3-273 (274)
42 PLN02211 methyl indole-3-aceta 99.9 1E-19 2.2E-24 174.0 23.4 216 64-282 16-270 (273)
43 TIGR03695 menH_SHCHC 2-succiny 99.9 5.1E-20 1.1E-24 171.1 20.5 210 66-279 1-250 (251)
44 PLN03084 alpha/beta hydrolase 99.9 1.9E-19 4.1E-24 178.9 25.4 227 44-280 111-382 (383)
45 PRK14875 acetoin dehydrogenase 99.9 8.2E-20 1.8E-24 182.2 22.3 210 64-281 129-370 (371)
46 PRK11126 2-succinyl-6-hydroxy- 99.8 1.4E-19 3.1E-24 169.4 22.2 203 66-281 2-241 (242)
47 KOG4409 Predicted hydrolase/ac 99.8 2.6E-19 5.6E-24 168.3 23.4 244 31-282 61-364 (365)
48 TIGR00976 /NonD putative hydro 99.8 4.1E-20 9E-25 193.4 20.2 129 43-174 2-136 (550)
49 PF05448 AXE1: Acetyl xylan es 99.8 9.6E-20 2.1E-24 176.4 21.1 238 35-282 54-320 (320)
50 KOG1454 Predicted hydrolase/ac 99.8 2.9E-19 6.3E-24 173.8 22.2 217 64-282 56-324 (326)
51 TIGR01392 homoserO_Ac_trn homo 99.8 1.4E-19 3.1E-24 179.4 20.3 233 45-280 13-351 (351)
52 PF12695 Abhydrolase_5: Alpha/ 99.8 2.3E-19 5E-24 154.2 15.5 143 68-264 1-145 (145)
53 PRK08775 homoserine O-acetyltr 99.8 7.4E-19 1.6E-23 173.7 20.1 227 44-282 42-339 (343)
54 COG0429 Predicted hydrolase of 99.8 2.2E-18 4.8E-23 161.2 22.0 242 38-284 50-342 (345)
55 PRK00175 metX homoserine O-ace 99.8 2E-18 4.3E-23 172.8 22.8 235 46-283 31-375 (379)
56 PRK11071 esterase YqiA; Provis 99.8 1.5E-18 3.3E-23 156.4 18.0 183 67-280 2-189 (190)
57 COG3458 Acetyl esterase (deace 99.8 6.5E-19 1.4E-23 159.2 14.5 267 2-282 24-317 (321)
58 PF00326 Peptidase_S9: Prolyl 99.8 6.9E-19 1.5E-23 162.0 14.4 188 82-285 3-212 (213)
59 TIGR01836 PHA_synth_III_C poly 99.8 2.3E-18 5E-23 170.6 19.1 226 51-281 49-349 (350)
60 PLN02872 triacylglycerol lipas 99.8 3.9E-18 8.4E-23 169.9 20.6 251 32-284 39-391 (395)
61 PRK05855 short chain dehydroge 99.8 7.4E-18 1.6E-22 178.1 23.5 230 42-283 7-293 (582)
62 PF01738 DLH: Dienelactone hyd 99.8 1.2E-17 2.5E-22 154.4 18.3 190 50-283 1-218 (218)
63 PLN02980 2-oxoglutarate decarb 99.8 4.9E-17 1.1E-21 187.6 26.5 217 65-283 1370-1640(1655)
64 PRK05371 x-prolyl-dipeptidyl a 99.8 2.3E-16 4.9E-21 169.2 29.1 259 31-289 164-526 (767)
65 COG2936 Predicted acyl esteras 99.8 8.6E-18 1.9E-22 169.3 16.3 318 35-379 17-395 (563)
66 PF02129 Peptidase_S15: X-Pro 99.8 3.7E-17 7.9E-22 156.3 19.1 217 46-264 1-271 (272)
67 TIGR03101 hydr2_PEP hydrolase, 99.8 3.8E-17 8.2E-22 154.1 17.6 137 40-181 3-145 (266)
68 KOG1838 Alpha/beta hydrolase [ 99.7 5.9E-16 1.3E-20 150.2 25.4 269 15-284 64-390 (409)
69 PRK10115 protease 2; Provision 99.7 2E-16 4.3E-21 168.6 24.3 245 33-286 412-679 (686)
70 KOG4667 Predicted esterase [Li 99.7 4.6E-17 1E-21 142.4 15.8 229 35-280 8-256 (269)
71 PLN02442 S-formylglutathione h 99.7 3.2E-16 7E-21 150.4 23.2 229 40-284 21-282 (283)
72 TIGR02821 fghA_ester_D S-formy 99.7 4.9E-16 1.1E-20 148.7 24.1 227 38-283 14-275 (275)
73 PF06500 DUF1100: Alpha/beta h 99.7 3.7E-17 8.1E-22 159.7 15.7 235 34-283 162-410 (411)
74 COG2945 Predicted hydrolase of 99.7 2.1E-16 4.7E-21 136.3 17.6 193 38-280 5-205 (210)
75 COG0412 Dienelactone hydrolase 99.7 5.2E-16 1.1E-20 144.3 21.5 201 38-284 3-235 (236)
76 KOG2984 Predicted hydrolase [G 99.7 4.4E-17 9.6E-22 141.0 12.9 228 45-281 28-275 (277)
77 PRK11460 putative hydrolase; P 99.7 3.7E-16 8.1E-21 145.6 20.3 177 62-284 12-210 (232)
78 PLN00021 chlorophyllase 99.7 7.2E-16 1.6E-20 149.2 21.3 219 28-286 17-287 (313)
79 TIGR01840 esterase_phb esteras 99.7 3.1E-16 6.6E-21 144.3 17.2 180 53-251 2-195 (212)
80 PRK10162 acetyl esterase; Prov 99.7 2.2E-15 4.8E-20 147.1 22.4 235 35-284 55-317 (318)
81 PRK06765 homoserine O-acetyltr 99.7 2E-15 4.4E-20 150.5 22.2 231 47-281 40-387 (389)
82 TIGR01838 PHA_synth_I poly(R)- 99.7 5.1E-15 1.1E-19 151.8 21.9 215 48-266 172-457 (532)
83 KOG2382 Predicted alpha/beta h 99.7 3.8E-15 8.3E-20 140.1 18.8 220 62-282 48-313 (315)
84 PF00561 Abhydrolase_1: alpha/ 99.7 2.9E-15 6.2E-20 138.3 15.4 181 94-276 1-229 (230)
85 PF06342 DUF1057: Alpha/beta h 99.6 2.7E-13 5.9E-18 124.8 23.8 212 36-251 5-239 (297)
86 PRK07868 acyl-CoA synthetase; 99.6 4.8E-14 1E-18 157.4 22.3 231 49-285 48-364 (994)
87 KOG2564 Predicted acetyltransf 99.6 3.1E-14 6.7E-19 129.5 16.2 127 36-168 49-180 (343)
88 PF02230 Abhydrolase_2: Phosph 99.6 1.3E-13 2.8E-18 127.1 19.5 181 62-283 10-216 (216)
89 PF02273 Acyl_transf_2: Acyl t 99.6 6.5E-13 1.4E-17 118.9 22.0 223 38-267 3-240 (294)
90 KOG2100 Dipeptidyl aminopeptid 99.5 1.8E-13 3.9E-18 146.7 18.8 224 46-286 506-751 (755)
91 COG3208 GrsT Predicted thioest 99.5 6.8E-13 1.5E-17 119.9 19.4 208 63-279 4-233 (244)
92 PF12715 Abhydrolase_7: Abhydr 99.5 2.7E-14 5.9E-19 137.4 11.0 205 34-261 85-343 (390)
93 KOG2281 Dipeptidyl aminopeptid 99.5 2.3E-13 5E-18 135.9 16.8 229 38-281 614-866 (867)
94 COG0400 Predicted esterase [Ge 99.5 1.6E-12 3.4E-17 117.5 17.8 177 62-283 14-206 (207)
95 COG0596 MhpC Predicted hydrola 99.5 2.8E-12 6.1E-17 118.9 19.9 209 66-279 21-279 (282)
96 TIGR01839 PHA_synth_II poly(R) 99.4 5.8E-12 1.3E-16 128.1 19.6 210 49-264 200-481 (560)
97 PF10503 Esterase_phd: Esteras 99.4 6.7E-12 1.4E-16 114.6 17.6 182 50-251 1-196 (220)
98 PF05728 UPF0227: Uncharacteri 99.4 8.8E-12 1.9E-16 111.2 17.8 181 69-279 2-186 (187)
99 KOG2624 Triglyceride lipase-ch 99.4 7.6E-12 1.6E-16 123.5 18.7 249 31-283 42-399 (403)
100 KOG1515 Arylacetamide deacetyl 99.4 1.2E-11 2.6E-16 119.6 19.7 233 42-282 66-335 (336)
101 COG0657 Aes Esterase/lipase [L 99.4 1.1E-11 2.4E-16 120.8 19.0 226 43-280 57-308 (312)
102 PF07859 Abhydrolase_3: alpha/ 99.4 2.5E-12 5.4E-17 117.9 13.3 187 69-265 1-209 (211)
103 KOG3043 Predicted hydrolase re 99.4 4.5E-12 9.9E-17 112.3 12.9 173 67-283 40-241 (242)
104 COG2021 MET2 Homoserine acetyl 99.4 4.4E-11 9.6E-16 114.4 20.3 233 46-281 34-367 (368)
105 COG4757 Predicted alpha/beta h 99.4 5.3E-12 1.1E-16 112.2 12.8 233 40-279 8-280 (281)
106 PF12740 Chlorophyllase2: Chlo 99.3 4.8E-11 1E-15 110.5 17.3 175 52-266 6-207 (259)
107 KOG2551 Phospholipase/carboxyh 99.3 7.1E-11 1.5E-15 104.9 15.4 180 64-285 3-223 (230)
108 PF12146 Hydrolase_4: Putative 99.3 1.4E-11 3.1E-16 93.9 8.4 63 47-113 1-63 (79)
109 COG4099 Predicted peptidase [G 99.3 5E-11 1.1E-15 109.6 13.1 161 45-251 169-342 (387)
110 TIGR03230 lipo_lipase lipoprot 99.2 1.1E-10 2.3E-15 116.9 12.9 108 64-171 39-155 (442)
111 PF06821 Ser_hydrolase: Serine 99.2 6.4E-10 1.4E-14 98.1 15.3 148 69-266 1-155 (171)
112 PF07224 Chlorophyllase: Chlor 99.2 7.6E-10 1.7E-14 100.5 15.7 179 48-266 31-232 (307)
113 PF00975 Thioesterase: Thioest 99.2 2E-09 4.4E-14 99.8 19.3 207 67-281 1-227 (229)
114 COG4188 Predicted dienelactone 99.2 2.1E-11 4.5E-16 116.9 5.7 220 37-266 38-296 (365)
115 PF08840 BAAT_C: BAAT / Acyl-C 99.2 1.8E-11 3.9E-16 112.3 5.0 165 119-284 3-212 (213)
116 TIGR01849 PHB_depoly_PhaZ poly 99.2 2.5E-09 5.4E-14 106.0 20.4 246 29-282 67-406 (406)
117 COG3571 Predicted hydrolase of 99.2 2.7E-09 5.9E-14 89.6 17.3 164 64-266 12-183 (213)
118 PF03403 PAF-AH_p_II: Platelet 99.2 1.5E-10 3.3E-15 115.0 11.7 178 64-285 98-361 (379)
119 cd00707 Pancreat_lipase_like P 99.2 8.2E-11 1.8E-15 112.3 9.3 108 64-171 34-148 (275)
120 PF08538 DUF1749: Protein of u 99.2 1.7E-10 3.7E-15 108.8 10.7 210 65-280 32-303 (303)
121 PF09752 DUF2048: Uncharacteri 99.2 1.5E-09 3.3E-14 103.9 17.1 222 50-280 77-347 (348)
122 PF03959 FSH1: Serine hydrolas 99.2 2.5E-10 5.5E-15 104.8 11.4 169 65-271 3-208 (212)
123 PF05677 DUF818: Chlamydia CHL 99.2 8.4E-09 1.8E-13 97.7 21.4 222 37-283 112-364 (365)
124 KOG1553 Predicted alpha/beta h 99.1 2.7E-10 5.8E-15 106.7 10.5 185 37-241 214-400 (517)
125 TIGR03502 lipase_Pla1_cef extr 99.1 8.7E-10 1.9E-14 117.0 14.7 92 65-156 448-575 (792)
126 COG1505 Serine proteases of th 99.1 1E-09 2.2E-14 110.2 13.3 235 31-283 388-647 (648)
127 PF06057 VirJ: Bacterial virul 99.1 6.3E-10 1.4E-14 97.7 10.1 179 67-280 3-190 (192)
128 COG3509 LpqC Poly(3-hydroxybut 99.0 2.2E-09 4.8E-14 99.5 11.9 124 45-170 42-179 (312)
129 PF10230 DUF2305: Uncharacteri 99.0 7.1E-08 1.5E-12 91.6 21.6 105 66-170 2-122 (266)
130 PF03583 LIP: Secretory lipase 99.0 6.1E-08 1.3E-12 93.2 20.5 200 84-288 17-287 (290)
131 PRK10439 enterobactin/ferric e 99.0 6.6E-08 1.4E-12 97.3 19.9 197 39-266 182-393 (411)
132 COG3243 PhaC Poly(3-hydroxyalk 98.9 1.1E-08 2.5E-13 99.2 13.4 198 65-265 106-371 (445)
133 KOG4627 Kynurenine formamidase 98.9 5.3E-09 1.2E-13 91.5 9.5 188 49-266 55-249 (270)
134 PF00756 Esterase: Putative es 98.9 4.1E-09 8.8E-14 99.3 9.6 126 47-172 5-152 (251)
135 PRK04940 hypothetical protein; 98.9 8.7E-08 1.9E-12 84.0 17.1 117 136-280 60-178 (180)
136 PF03096 Ndr: Ndr family; Int 98.9 2.9E-07 6.4E-12 86.2 21.3 232 42-281 4-278 (283)
137 PF06028 DUF915: Alpha/beta hy 98.9 2.7E-08 5.8E-13 93.2 13.0 199 64-279 9-252 (255)
138 COG1770 PtrB Protease II [Amin 98.9 3.3E-08 7.1E-13 100.8 14.5 218 33-266 415-658 (682)
139 KOG2237 Predicted serine prote 98.9 2.6E-08 5.6E-13 100.7 13.1 242 34-284 438-707 (712)
140 KOG2565 Predicted hydrolases o 98.9 1.7E-07 3.8E-12 89.1 17.6 120 44-165 130-259 (469)
141 KOG2931 Differentiation-relate 98.8 2.2E-06 4.9E-11 79.5 22.5 236 38-281 23-305 (326)
142 KOG3847 Phospholipase A2 (plat 98.8 5.5E-08 1.2E-12 90.5 11.5 108 63-170 115-275 (399)
143 KOG2112 Lysophospholipase [Lip 98.8 9.1E-08 2E-12 84.7 12.3 176 66-281 3-203 (206)
144 PF07819 PGAP1: PGAP1-like pro 98.7 8.6E-08 1.9E-12 88.6 11.3 105 65-171 3-124 (225)
145 PRK10252 entF enterobactin syn 98.7 5.6E-07 1.2E-11 104.3 20.6 206 65-283 1067-1294(1296)
146 COG3545 Predicted esterase of 98.7 6.9E-07 1.5E-11 77.0 15.5 169 67-281 3-178 (181)
147 PF10142 PhoPQ_related: PhoPQ- 98.7 2.4E-06 5.3E-11 83.7 19.1 155 134-289 170-327 (367)
148 COG1073 Hydrolases of the alph 98.6 3.3E-07 7.3E-12 87.7 11.2 233 48-283 31-298 (299)
149 KOG3101 Esterase D [General fu 98.6 5.2E-07 1.1E-11 79.5 10.3 203 47-266 25-263 (283)
150 COG4814 Uncharacterized protei 98.4 4.8E-06 1E-10 75.7 13.7 199 66-281 45-286 (288)
151 PF12048 DUF3530: Protein of u 98.4 8.3E-05 1.8E-09 72.2 22.5 202 39-282 63-309 (310)
152 KOG3975 Uncharacterized conser 98.4 5.7E-05 1.2E-09 68.6 19.4 218 62-279 25-300 (301)
153 PF01674 Lipase_2: Lipase (cla 98.4 2.1E-07 4.7E-12 85.0 4.2 90 67-157 2-96 (219)
154 PLN02733 phosphatidylcholine-s 98.4 9.2E-07 2E-11 89.3 9.0 93 77-171 105-202 (440)
155 cd00312 Esterase_lipase Estera 98.4 9.5E-07 2.1E-11 91.8 8.0 119 49-170 78-213 (493)
156 PF05705 DUF829: Eukaryotic pr 98.3 3.8E-05 8.3E-10 71.9 17.5 204 67-279 1-240 (240)
157 PF10340 DUF2424: Protein of u 98.3 2.1E-05 4.6E-10 76.9 15.7 106 64-173 120-238 (374)
158 smart00824 PKS_TE Thioesterase 98.3 1.5E-05 3.2E-10 72.1 13.7 86 77-168 10-100 (212)
159 PF05990 DUF900: Alpha/beta hy 98.3 1.5E-05 3.3E-10 74.1 13.9 110 63-172 15-139 (233)
160 PTZ00472 serine carboxypeptida 98.3 1.4E-05 3.1E-10 81.8 14.4 127 46-175 59-221 (462)
161 PF00135 COesterase: Carboxyle 98.3 2.4E-06 5.2E-11 89.5 8.4 119 50-168 109-243 (535)
162 KOG3253 Predicted alpha/beta h 98.2 5E-06 1.1E-10 83.8 9.7 160 65-266 175-347 (784)
163 COG2272 PnbA Carboxylesterase 98.2 3.3E-06 7.1E-11 84.2 7.9 119 50-171 80-218 (491)
164 PF00151 Lipase: Lipase; Inte 98.2 2.1E-06 4.6E-11 83.8 5.1 107 63-171 68-188 (331)
165 COG3150 Predicted esterase [Ge 98.1 0.00011 2.5E-09 62.7 13.5 182 69-280 2-187 (191)
166 COG3319 Thioesterase domains o 98.1 2.2E-05 4.7E-10 73.5 9.7 100 67-171 1-104 (257)
167 KOG1551 Uncharacterized conser 98.0 3.6E-05 7.7E-10 70.3 10.1 217 64-282 111-366 (371)
168 COG0627 Predicted esterase [Ge 98.0 3.1E-05 6.7E-10 74.9 10.3 215 63-285 51-314 (316)
169 KOG4840 Predicted hydrolases o 98.0 0.00088 1.9E-08 59.9 17.5 108 64-173 34-147 (299)
170 COG2382 Fes Enterochelin ester 97.9 0.0002 4.2E-09 67.5 13.1 123 48-171 80-213 (299)
171 COG4782 Uncharacterized protei 97.9 0.00025 5.4E-09 68.2 13.1 113 64-176 114-240 (377)
172 PF11339 DUF3141: Protein of u 97.8 0.0017 3.6E-08 65.4 18.2 74 85-167 93-172 (581)
173 PF05057 DUF676: Putative seri 97.8 6E-05 1.3E-09 69.4 7.7 89 64-155 2-97 (217)
174 PF05577 Peptidase_S28: Serine 97.7 0.00032 6.9E-09 71.7 12.3 108 65-172 28-150 (434)
175 COG3946 VirJ Type IV secretory 97.7 0.001 2.2E-08 64.8 14.3 91 64-158 258-348 (456)
176 PF04301 DUF452: Protein of un 97.6 0.00036 7.8E-09 63.3 9.2 76 66-167 11-87 (213)
177 COG1075 LipA Predicted acetylt 97.6 0.00023 5E-09 70.0 8.3 104 66-174 59-168 (336)
178 PF11144 DUF2920: Protein of u 97.6 0.00085 1.8E-08 66.1 11.8 130 39-171 11-220 (403)
179 COG4287 PqaA PhoPQ-activated p 97.4 0.00075 1.6E-08 64.7 8.8 149 133-282 231-387 (507)
180 PF00450 Peptidase_S10: Serine 97.4 0.0023 5E-08 64.8 12.9 131 41-174 17-185 (415)
181 PF07082 DUF1350: Protein of u 97.4 0.019 4.1E-07 52.9 17.1 99 64-168 15-123 (250)
182 COG2819 Predicted hydrolase of 97.2 0.012 2.6E-07 54.8 14.4 43 128-170 127-172 (264)
183 KOG3967 Uncharacterized conser 97.0 0.014 3.1E-07 52.0 11.5 103 64-166 99-223 (297)
184 PLN02633 palmitoyl protein thi 96.9 0.052 1.1E-06 51.9 15.7 99 66-169 25-130 (314)
185 KOG1516 Carboxylesterase and r 96.9 0.0038 8.3E-08 65.8 8.8 117 50-168 97-230 (545)
186 PF08386 Abhydrolase_4: TAP-li 96.9 0.0043 9.3E-08 49.8 7.1 58 223-281 33-93 (103)
187 PF02450 LCAT: Lecithin:choles 96.8 0.0038 8.3E-08 62.7 8.1 83 81-171 66-161 (389)
188 KOG3724 Negative regulator of 96.8 0.0035 7.6E-08 65.8 7.8 98 65-168 88-218 (973)
189 PLN02209 serine carboxypeptida 96.8 0.035 7.7E-07 56.5 14.4 133 40-174 44-216 (437)
190 PLN03016 sinapoylglucose-malat 96.7 0.022 4.8E-07 57.9 12.6 126 46-173 48-213 (433)
191 KOG2183 Prolylcarboxypeptidase 96.7 0.0064 1.4E-07 59.5 8.2 101 67-167 81-199 (492)
192 PLN02606 palmitoyl-protein thi 96.7 0.013 2.8E-07 55.8 9.8 99 66-169 26-131 (306)
193 KOG2541 Palmitoyl protein thio 96.6 0.014 3.1E-07 53.9 9.4 98 67-169 24-127 (296)
194 PF04083 Abhydro_lipase: Parti 96.6 0.0076 1.7E-07 43.5 5.9 50 33-82 8-59 (63)
195 PF02089 Palm_thioest: Palmito 96.5 0.0053 1.2E-07 57.9 5.9 103 65-169 4-115 (279)
196 KOG2182 Hydrolytic enzymes of 96.4 0.034 7.4E-07 55.9 11.2 127 43-170 64-207 (514)
197 KOG1282 Serine carboxypeptidas 95.9 0.1 2.2E-06 52.9 12.0 130 40-171 49-214 (454)
198 cd00741 Lipase Lipase. Lipase 95.8 0.022 4.8E-07 49.1 6.1 51 120-170 12-67 (153)
199 PF01764 Lipase_3: Lipase (cla 95.7 0.023 5E-07 48.0 5.6 50 121-170 49-106 (140)
200 PLN02517 phosphatidylcholine-s 95.5 0.029 6.2E-07 58.0 6.3 86 81-170 157-263 (642)
201 cd00519 Lipase_3 Lipase (class 95.4 0.05 1.1E-06 50.3 7.2 52 120-171 112-169 (229)
202 TIGR03712 acc_sec_asp2 accesso 95.3 3.8 8.2E-05 41.7 20.3 108 62-176 285-396 (511)
203 KOG4388 Hormone-sensitive lipa 95.2 0.032 6.9E-07 56.8 5.4 102 62-169 392-507 (880)
204 KOG2369 Lecithin:cholesterol a 94.9 0.046 1E-06 54.7 5.7 76 80-159 124-205 (473)
205 PLN02454 triacylglycerol lipas 94.8 0.1 2.3E-06 52.0 7.9 53 119-171 209-272 (414)
206 PF07519 Tannase: Tannase and 94.5 1.1 2.3E-05 46.3 14.7 129 42-176 7-156 (474)
207 COG4947 Uncharacterized protei 94.3 0.18 4E-06 43.6 7.0 59 119-177 84-143 (227)
208 PF11288 DUF3089: Protein of u 94.2 0.089 1.9E-06 47.6 5.4 71 86-157 39-116 (207)
209 COG2939 Carboxypeptidase C (ca 94.0 0.3 6.4E-06 49.6 9.1 94 62-156 97-218 (498)
210 PF01083 Cutinase: Cutinase; 93.9 0.27 5.8E-06 43.7 7.8 75 92-170 38-122 (179)
211 COG2830 Uncharacterized protei 93.6 0.2 4.4E-06 42.8 6.0 76 65-166 10-86 (214)
212 PF11187 DUF2974: Protein of u 93.3 0.21 4.7E-06 46.0 6.3 34 136-169 84-122 (224)
213 KOG2521 Uncharacterized conser 92.9 1.5 3.3E-05 42.9 11.8 222 64-287 37-295 (350)
214 PF05576 Peptidase_S37: PS-10 92.5 0.43 9.3E-06 47.3 7.3 105 63-171 60-170 (448)
215 PLN02408 phospholipase A1 92.4 0.45 9.7E-06 46.9 7.4 36 121-156 183-220 (365)
216 PLN00413 triacylglycerol lipas 92.0 0.25 5.5E-06 50.0 5.2 35 121-155 269-303 (479)
217 KOG4372 Predicted alpha/beta h 92.0 0.3 6.5E-06 48.2 5.6 89 63-155 77-169 (405)
218 PLN02162 triacylglycerol lipas 91.8 0.27 5.8E-06 49.7 5.2 35 121-155 263-297 (475)
219 PLN02571 triacylglycerol lipas 91.7 0.25 5.4E-06 49.4 4.9 37 120-156 208-246 (413)
220 PLN02934 triacylglycerol lipas 91.6 0.27 5.9E-06 50.1 5.0 36 120-155 305-340 (515)
221 KOG1202 Animal-type fatty acid 91.5 9.2 0.0002 43.2 16.3 94 64-169 2121-2218(2376)
222 PF06259 Abhydrolase_8: Alpha/ 91.4 0.68 1.5E-05 40.9 6.8 51 119-169 91-143 (177)
223 PLN02310 triacylglycerol lipas 91.0 0.29 6.3E-06 48.8 4.5 36 121-156 190-229 (405)
224 PLN03037 lipase class 3 family 90.4 0.32 7E-06 49.7 4.3 21 136-156 318-338 (525)
225 PLN02324 triacylglycerol lipas 90.1 0.43 9.4E-06 47.7 4.8 37 120-156 197-235 (415)
226 PLN02213 sinapoylglucose-malat 90.1 1.4 3E-05 43.1 8.3 78 95-172 3-98 (319)
227 PLN02847 triacylglycerol lipas 89.8 0.93 2E-05 47.2 7.0 28 129-156 244-271 (633)
228 PLN02802 triacylglycerol lipas 89.2 0.55 1.2E-05 48.0 4.8 36 121-156 313-350 (509)
229 PLN02753 triacylglycerol lipas 88.8 0.64 1.4E-05 47.7 5.0 37 119-155 290-331 (531)
230 PLN02761 lipase class 3 family 88.8 0.6 1.3E-05 47.9 4.8 37 119-155 271-313 (527)
231 PLN02719 triacylglycerol lipas 88.5 0.64 1.4E-05 47.6 4.8 37 120-156 277-318 (518)
232 KOG4540 Putative lipase essent 87.8 1.1 2.4E-05 42.1 5.4 49 120-169 260-308 (425)
233 COG5153 CVT17 Putative lipase 87.8 1.1 2.4E-05 42.1 5.4 49 120-169 260-308 (425)
234 KOG4569 Predicted lipase [Lipi 87.2 0.84 1.8E-05 44.9 4.6 37 120-156 155-191 (336)
235 KOG4389 Acetylcholinesterase/B 85.5 1.1 2.4E-05 45.3 4.5 113 50-168 121-253 (601)
236 PF06441 EHN: Epoxide hydrolas 85.0 1.6 3.5E-05 35.5 4.5 38 44-85 74-111 (112)
237 PF09994 DUF2235: Uncharacteri 84.7 5.7 0.00012 37.9 8.9 91 67-157 2-113 (277)
238 PF08237 PE-PPE: PE-PPE domain 83.5 5.4 0.00012 36.8 7.8 64 93-156 2-68 (225)
239 PF03283 PAE: Pectinacetyleste 82.4 5.7 0.00012 39.5 8.1 37 119-155 137-175 (361)
240 COG3673 Uncharacterized conser 82.3 9.5 0.00021 36.7 8.9 93 64-156 29-142 (423)
241 PF07519 Tannase: Tannase and 82.2 2 4.4E-05 44.3 5.0 63 223-285 352-430 (474)
242 KOG1283 Serine carboxypeptidas 81.7 21 0.00046 34.5 10.9 132 45-179 11-175 (414)
243 COG4553 DepA Poly-beta-hydroxy 81.6 50 0.0011 31.6 16.2 61 224-284 339-409 (415)
244 PF06850 PHB_depo_C: PHB de-po 81.1 2.5 5.3E-05 37.7 4.3 59 224-282 134-202 (202)
245 PF05277 DUF726: Protein of un 76.1 7 0.00015 38.4 6.3 39 134-172 218-262 (345)
246 COG0529 CysC Adenylylsulfate k 66.1 40 0.00087 29.8 8.0 38 64-101 20-59 (197)
247 PLN02213 sinapoylglucose-malat 62.3 24 0.00052 34.4 6.8 58 224-281 233-316 (319)
248 PTZ00472 serine carboxypeptida 57.2 23 0.00051 36.5 6.0 58 224-281 364-458 (462)
249 PF00450 Peptidase_S10: Serine 56.3 18 0.0004 36.2 5.1 57 224-280 330-414 (415)
250 PLN03016 sinapoylglucose-malat 56.2 36 0.00078 34.8 7.1 58 224-281 347-430 (433)
251 COG4822 CbiK Cobalamin biosynt 54.8 47 0.001 30.1 6.6 62 64-141 136-199 (265)
252 PLN02209 serine carboxypeptida 54.3 39 0.00085 34.5 7.0 58 224-281 351-434 (437)
253 KOG1282 Serine carboxypeptidas 47.7 43 0.00093 34.3 6.0 58 225-282 364-448 (454)
254 cd07212 Pat_PNPLA9 Patatin-lik 46.7 1.1E+02 0.0023 29.8 8.4 33 124-156 16-52 (312)
255 KOG2029 Uncharacterized conser 40.9 37 0.0008 35.6 4.3 49 122-170 510-572 (697)
256 COG1087 GalE UDP-glucose 4-epi 39.0 1.2E+02 0.0026 29.3 7.1 84 85-169 16-119 (329)
257 KOG2385 Uncharacterized conser 38.9 73 0.0016 32.9 5.9 47 127-173 437-490 (633)
258 TIGR03709 PPK2_rel_1 polyphosp 37.2 1.2E+02 0.0026 28.7 6.8 72 64-148 53-126 (264)
259 cd07198 Patatin Patatin-like p 36.2 52 0.0011 28.6 4.1 35 123-158 14-48 (172)
260 PF12242 Eno-Rase_NADH_b: NAD( 35.8 80 0.0017 23.7 4.2 39 119-157 20-61 (78)
261 COG1856 Uncharacterized homolo 35.0 84 0.0018 28.8 5.1 79 85-165 102-185 (275)
262 PRK12467 peptide synthase; Pro 34.9 1.4E+02 0.003 39.9 9.1 87 65-156 3691-3777(3956)
263 PF06309 Torsin: Torsin; Inte 34.9 59 0.0013 27.0 3.9 31 63-93 49-81 (127)
264 TIGR03707 PPK2_P_aer polyphosp 34.6 1.7E+02 0.0036 27.1 7.3 72 65-149 29-102 (230)
265 PF09949 DUF2183: Uncharacteri 34.5 2.3E+02 0.005 22.4 7.6 82 82-165 13-97 (100)
266 PRK10279 hypothetical protein; 33.9 51 0.0011 31.8 3.9 34 123-157 21-54 (300)
267 cd07225 Pat_PNPLA6_PNPLA7 Pata 33.3 57 0.0012 31.6 4.2 35 123-158 31-65 (306)
268 PF10081 Abhydrolase_9: Alpha/ 32.7 54 0.0012 31.2 3.7 86 85-171 53-148 (289)
269 PF06792 UPF0261: Uncharacteri 32.0 4.9E+02 0.011 26.3 10.4 93 67-159 2-118 (403)
270 cd07207 Pat_ExoU_VipD_like Exo 31.1 69 0.0015 28.2 4.2 35 123-158 15-49 (194)
271 cd07210 Pat_hypo_W_succinogene 29.9 82 0.0018 28.8 4.4 35 123-158 16-50 (221)
272 TIGR00128 fabD malonyl CoA-acy 29.4 66 0.0014 30.4 3.9 29 127-155 74-102 (290)
273 smart00827 PKS_AT Acyl transfe 29.2 68 0.0015 30.5 4.0 29 126-155 73-101 (298)
274 COG3946 VirJ Type IV secretory 28.5 1.8E+02 0.0038 29.4 6.5 104 64-167 46-154 (456)
275 PF11713 Peptidase_C80: Peptid 28.1 29 0.00064 30.0 1.1 50 99-148 59-116 (157)
276 cd07227 Pat_Fungal_NTE1 Fungal 26.6 84 0.0018 29.8 4.0 35 123-158 26-60 (269)
277 PF00698 Acyl_transf_1: Acyl t 26.5 47 0.001 32.2 2.4 29 125-154 74-102 (318)
278 TIGR03131 malonate_mdcH malona 26.2 86 0.0019 29.9 4.1 28 127-155 68-95 (295)
279 TIGR02873 spore_ylxY probable 26.1 70 0.0015 30.3 3.4 34 67-100 231-264 (268)
280 PRK02399 hypothetical protein; 25.0 7.3E+02 0.016 25.1 10.9 98 67-164 4-126 (406)
281 cd07228 Pat_NTE_like_bacteria 25.0 1.1E+02 0.0025 26.5 4.4 35 123-158 16-50 (175)
282 COG1752 RssA Predicted esteras 24.9 92 0.002 30.0 4.1 34 124-158 28-61 (306)
283 TIGR02764 spore_ybaN_pdaB poly 24.4 56 0.0012 28.9 2.3 34 67-100 152-188 (191)
284 cd07209 Pat_hypo_Ecoli_Z1214_l 24.4 1E+02 0.0022 28.0 4.0 35 123-158 14-48 (215)
285 PF00326 Peptidase_S9: Prolyl 22.7 1.2E+02 0.0025 27.1 4.1 64 65-134 143-211 (213)
286 cd07224 Pat_like Patatin-like 22.7 1.2E+02 0.0026 28.0 4.2 35 123-158 15-51 (233)
287 cd07205 Pat_PNPLA6_PNPLA7_NTE1 22.5 1.4E+02 0.003 25.9 4.4 34 123-157 16-49 (175)
288 TIGR02884 spore_pdaA delta-lac 21.8 1E+02 0.0022 28.2 3.5 35 66-100 186-221 (224)
289 PRK06731 flhF flagellar biosyn 21.8 6.6E+02 0.014 23.8 9.0 63 92-165 153-218 (270)
290 TIGR01118 lacA galactose-6-pho 21.7 2.4E+02 0.0052 23.9 5.3 73 83-169 16-88 (141)
291 PRK13256 thiopurine S-methyltr 21.5 81 0.0018 29.1 2.7 29 69-102 46-74 (226)
292 PTZ00215 ribose 5-phosphate is 20.9 5.1E+02 0.011 22.2 7.3 75 83-169 18-94 (151)
293 TIGR00689 rpiB_lacA_lacB sugar 20.9 5.2E+02 0.011 21.9 7.4 74 83-169 14-88 (144)
294 TIGR00632 vsr DNA mismatch end 20.7 1.6E+02 0.0036 24.0 4.0 14 86-99 100-113 (117)
295 PF10605 3HBOH: 3HB-oligomer h 20.5 73 0.0016 33.7 2.4 32 138-169 287-320 (690)
296 KOG0781 Signal recognition par 20.5 3.1E+02 0.0067 28.4 6.6 85 70-165 442-537 (587)
297 PF09419 PGP_phosphatase: Mito 20.4 3.5E+02 0.0075 23.7 6.3 54 88-146 35-88 (168)
No 1
>PRK13604 luxD acyl transferase; Provisional
Probab=99.96 E-value=9.9e-27 Score=220.22 Aligned_cols=241 Identities=15% Similarity=0.132 Sum_probs=176.2
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCC-CCCCCCCcCC
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSL 114 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~-G~S~~~~~~~ 114 (446)
...+..+...||.+|++++..|.. ....+.++||++||+++....+..+++.|+++||+|+.+|+||+ |.|+|.....
T Consensus 8 ~~~~~~~~~~dG~~L~Gwl~~P~~-~~~~~~~~vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~ 86 (307)
T PRK13604 8 KTIDHVICLENGQSIRVWETLPKE-NSPKKNNTILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEF 86 (307)
T ss_pred cchhheEEcCCCCEEEEEEEcCcc-cCCCCCCEEEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccC
Confidence 445677888999999999988863 13457789999999999887799999999999999999999988 9998876443
Q ss_pred Ccc-hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHH
Q 013268 115 GWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (446)
Q Consensus 115 ~~~-~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (446)
... ...|+.++++|++++ ...+|+|+||||||.+|+.+|... +++++|+.+|+.++.+.+..........+|.....
T Consensus 87 t~s~g~~Dl~aaid~lk~~-~~~~I~LiG~SmGgava~~~A~~~-~v~~lI~~sp~~~l~d~l~~~~~~~~~~~p~~~lp 164 (307)
T PRK13604 87 TMSIGKNSLLTVVDWLNTR-GINNLGLIAASLSARIAYEVINEI-DLSFLITAVGVVNLRDTLERALGYDYLSLPIDELP 164 (307)
T ss_pred cccccHHHHHHHHHHHHhc-CCCceEEEEECHHHHHHHHHhcCC-CCCEEEEcCCcccHHHHHHHhhhcccccCcccccc
Confidence 322 278999999999886 568899999999999997777644 49999999999998877765433211111111110
Q ss_pred HH-----HHH-HHHHHhhhhccccc-ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC-CCcEEEEeCC-CCC
Q 013268 194 MA-----VQY-MRRVIQKKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHN 264 (446)
Q Consensus 194 ~~-----~~~-~~~~~~~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~~~~~~g-gH~ 264 (446)
.. ... ...++.....+... ...+...++++++|+|+|||..|.+||++.++.+++.++ .++++++++| +|.
T Consensus 165 ~~~d~~g~~l~~~~f~~~~~~~~~~~~~s~i~~~~~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~ 244 (307)
T PRK13604 165 EDLDFEGHNLGSEVFVTDCFKHGWDTLDSTINKMKGLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHD 244 (307)
T ss_pred cccccccccccHHHHHHHHHhcCccccccHHHHHhhcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccc
Confidence 00 000 01222222122111 234556677888999999999999999999999999886 5788999998 999
Q ss_pred CCChhHHHHHHHHHHHhh
Q 013268 265 SSRPQFYYDSVSIFFYNV 282 (446)
Q Consensus 265 ~~~~~~~~~~i~~Fl~~~ 282 (446)
+.+.-. .+..|.+..
T Consensus 245 l~~~~~---~~~~~~~~~ 259 (307)
T PRK13604 245 LGENLV---VLRNFYQSV 259 (307)
T ss_pred cCcchH---HHHHHHHHH
Confidence 885432 334455544
No 2
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.95 E-value=1.3e-26 Score=227.83 Aligned_cols=255 Identities=20% Similarity=0.288 Sum_probs=172.0
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh-hHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVS- 113 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~-~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~- 113 (446)
+.++..+.+.||..|+++.|.|.. .+.++++|||+||++.+.. .+..++..|+++||+|+++|+||||.|.+....
T Consensus 31 ~~~~~~~~~~dg~~l~~~~~~~~~--~~~~~~~VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~ 108 (330)
T PLN02298 31 KGSKSFFTSPRGLSLFTRSWLPSS--SSPPRALIFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYV 108 (330)
T ss_pred ccccceEEcCCCCEEEEEEEecCC--CCCCceEEEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccC
Confidence 346667888999999999998752 2246789999999986643 456677889989999999999999999754321
Q ss_pred CCcc-hHHHHHHHHHHHHhcC--CCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH------HHHHHHHHH
Q 013268 114 LGWH-EKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVY 183 (446)
Q Consensus 114 ~~~~-~~~D~~~~i~~l~~~~--~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~------~~~~~~~~~ 183 (446)
.... ..+|+.++++++.... ...+++|+||||||.+++.++.++|+ |+++|+++|...... .........
T Consensus 109 ~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 188 (330)
T PLN02298 109 PNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIPQILTFV 188 (330)
T ss_pred CCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHHHHHHHH
Confidence 1212 2788999999997642 23579999999999999999999998 999999988653211 011111111
Q ss_pred hhhCCchhH-------H-HHHHHHHHHHhh--hhccc----------cc--ccchhhhCCCCCCcEEEEEeCCCCCCChH
Q 013268 184 KIRLPKFTV-------K-MAVQYMRRVIQK--KAKFD----------IM--DLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (446)
Q Consensus 184 ~~~~~~~~~-------~-~~~~~~~~~~~~--~~~~~----------~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (446)
....+.... . .........+.. ...+. .. .......+.++++|+|+++|++|.++|++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~ivp~~ 268 (330)
T PLN02298 189 ARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVTDYLGKKLKDVSIPFIVLHGSADVVTDPD 268 (330)
T ss_pred HHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHHHHHHHhhhhcCCCEEEEecCCCCCCCHH
Confidence 111111000 0 000000000000 00000 00 00123456789999999999999999999
Q ss_pred HHHHHHHHcC-CCcEEEEeCC-CCCCC--Ch----hHHHHHHHHHHHhhcCCCCCCCCC
Q 013268 242 HSDLIFNAYA-GDKNIIKFDG-DHNSS--RP----QFYYDSVSIFFYNVLHPPQIPSTH 292 (446)
Q Consensus 242 ~~~~l~~~l~-~~~~~~~~~g-gH~~~--~~----~~~~~~i~~Fl~~~L~~~~~~~~~ 292 (446)
.++.+++.++ ..++++++++ +|... +| +.+.+.|.+||.+++.....++.+
T Consensus 269 ~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~~~~ 327 (330)
T PLN02298 269 VSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATPSED 327 (330)
T ss_pred HHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCCccc
Confidence 9999998876 4578999998 99965 34 357788899999998766665544
No 3
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.95 E-value=6.1e-26 Score=224.76 Aligned_cols=247 Identities=21% Similarity=0.328 Sum_probs=167.9
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~ 113 (446)
+..++..+.+.||.+|.+..|.|. ...++|+|||+||++++... |..++..|+++||+|+++|+||||.|++....
T Consensus 59 ~~~~~~~~~~~~g~~l~~~~~~p~---~~~~~~~iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~ 135 (349)
T PLN02385 59 IKTEESYEVNSRGVEIFSKSWLPE---NSRPKAAVCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGY 135 (349)
T ss_pred cceeeeeEEcCCCCEEEEEEEecC---CCCCCeEEEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCC
Confidence 445667788899999999999986 33567999999999988654 56788899888999999999999999864322
Q ss_pred -CCcc-hHHHHHHHHHHHHhcC--CCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH------HHHHHHHH
Q 013268 114 -LGWH-EKDDLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDV 182 (446)
Q Consensus 114 -~~~~-~~~D~~~~i~~l~~~~--~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~------~~~~~~~~ 182 (446)
..+. .++|+.++++.+.... ...+++|+||||||++++.++.++|+ ++++|+++|...... ........
T Consensus 136 ~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~~~~~ 215 (349)
T PLN02385 136 IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQILIL 215 (349)
T ss_pred cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHHHHHH
Confidence 1222 2667777777775432 23579999999999999999999998 999999988643211 11111111
Q ss_pred HhhhCCch------h-HHH-HHHHHHHHHhhh--hcc----------ccc--ccchhhhCCCCCCcEEEEEeCCCCCCCh
Q 013268 183 YKIRLPKF------T-VKM-AVQYMRRVIQKK--AKF----------DIM--DLNCLKLAPKTFIPALFGHASEDKFIRA 240 (446)
Q Consensus 183 ~~~~~~~~------~-~~~-~~~~~~~~~~~~--~~~----------~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (446)
.....+.. . ... ............ ..+ ... ..+....+.++++|+|+++|++|.++|+
T Consensus 216 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~i~~P~Lii~G~~D~vv~~ 295 (349)
T PLN02385 216 LANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQLEEVSLPLLILHGEADKVTDP 295 (349)
T ss_pred HHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhcccCCCCEEEEEeCCCCccCh
Confidence 11111100 0 000 000000000000 000 000 0122345778999999999999999999
Q ss_pred HHHHHHHHHcC-CCcEEEEeCC-CCCCC--ChhH----HHHHHHHHHHhhcC
Q 013268 241 RHSDLIFNAYA-GDKNIIKFDG-DHNSS--RPQF----YYDSVSIFFYNVLH 284 (446)
Q Consensus 241 ~~~~~l~~~l~-~~~~~~~~~g-gH~~~--~~~~----~~~~i~~Fl~~~L~ 284 (446)
+.++.+++.++ .+++++++++ ||... +|++ +++.|.+||++++.
T Consensus 296 ~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL~~~~~ 347 (349)
T PLN02385 296 SVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWLDSHST 347 (349)
T ss_pred HHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHHHHhcc
Confidence 99999999885 3578889997 99976 4554 78889999998864
No 4
>PHA02857 monoglyceride lipase; Provisional
Probab=99.95 E-value=8.9e-26 Score=216.13 Aligned_cols=237 Identities=17% Similarity=0.249 Sum_probs=165.2
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC-Ccc-hH
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-GWH-EK 119 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~-~~~-~~ 119 (446)
+.+.||..|.++.|.|. ..++++|+++||++++...|..++..|+++||+|+++|+||||.|.+..... .+. .+
T Consensus 5 ~~~~~g~~l~~~~~~~~----~~~~~~v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~ 80 (276)
T PHA02857 5 MFNLDNDYIYCKYWKPI----TYPKALVFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYV 80 (276)
T ss_pred eecCCCCEEEEEeccCC----CCCCEEEEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHH
Confidence 55679999999999884 3566888888999999999999999999999999999999999998643221 221 26
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH-----HHHHHHHH-Hh-hh-CCch
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-----LMLELVDV-YK-IR-LPKF 190 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~-----~~~~~~~~-~~-~~-~~~~ 190 (446)
+|+...++++++.....+++++||||||.+|+.+|..+|+ ++++|+++|...... .+...... +. .. ...+
T Consensus 81 ~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (276)
T PHA02857 81 RDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRLNLLAAKLMGIFYPNKIVGKL 160 (276)
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHHHHHHHHHHHHhCCCCccCCC
Confidence 7777777777766556789999999999999999999998 899999998754211 11111100 00 00 0000
Q ss_pred hHHHHHH---HHHHHHhhhhc----------ccc--cccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcE
Q 013268 191 TVKMAVQ---YMRRVIQKKAK----------FDI--MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (446)
Q Consensus 191 ~~~~~~~---~~~~~~~~~~~----------~~~--~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~ 255 (446)
....... ........... ... ...+....+.++++|+|+++|++|.++|++.+..+.+.+...++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~l~~~~~~~~~ 240 (276)
T PHA02857 161 CPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIPKIKTPILILQGTNNEISDVSGAYYFMQHANCNRE 240 (276)
T ss_pred CHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcccCCCCEEEEecCCCCcCChHHHHHHHHHccCCce
Confidence 0000000 00000000000 000 00122346778999999999999999999999999998865678
Q ss_pred EEEeCC-CCCCC--C---hhHHHHHHHHHHHhh
Q 013268 256 IIKFDG-DHNSS--R---PQFYYDSVSIFFYNV 282 (446)
Q Consensus 256 ~~~~~g-gH~~~--~---~~~~~~~i~~Fl~~~ 282 (446)
+.++++ ||... . .+++++.+.+||+++
T Consensus 241 ~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 241 IKIYEGAKHHLHKETDEVKKSVMKEIETWIFNR 273 (276)
T ss_pred EEEeCCCcccccCCchhHHHHHHHHHHHHHHHh
Confidence 888887 99876 2 357888999999875
No 5
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.94 E-value=7.5e-26 Score=208.40 Aligned_cols=245 Identities=19% Similarity=0.332 Sum_probs=176.5
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCCh-hhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL 114 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~-~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~ 114 (446)
....-.+++.+|.+|.+..|.|.. ..+++..|+++||++... ..|..++..|+..||.|+++|++|||.|+|....-
T Consensus 26 ~~~~~~~~n~rG~~lft~~W~p~~--~~~pr~lv~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi 103 (313)
T KOG1455|consen 26 TYSESFFTNPRGAKLFTQSWLPLS--GTEPRGLVFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYV 103 (313)
T ss_pred ceeeeeEEcCCCCEeEEEecccCC--CCCCceEEEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccC
Confidence 345667889999999999999963 336788999999999875 67788999999999999999999999999765443
Q ss_pred Cc--chHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH------HHHHHHHHH
Q 013268 115 GW--HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD------LMLELVDVY 183 (446)
Q Consensus 115 ~~--~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~------~~~~~~~~~ 183 (446)
.. ..++|+...++.++.+... .+.+++||||||++++.++.++|+ .+|+|+++|.....+ ....++...
T Consensus 104 ~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~~l~~l 183 (313)
T KOG1455|consen 104 PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVISILTLL 183 (313)
T ss_pred CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHHHHHHH
Confidence 22 2277888888876666443 688999999999999999999998 899999888654322 222222222
Q ss_pred hhhCCchhH---HH-----HHHHHHH-HHhh-----------hhccccc--ccchhhhCCCCCCcEEEEEeCCCCCCChH
Q 013268 184 KIRLPKFTV---KM-----AVQYMRR-VIQK-----------KAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (446)
Q Consensus 184 ~~~~~~~~~---~~-----~~~~~~~-~~~~-----------~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (446)
...+|.+.. +. ..+-..+ .... ...+++. ..+....+.++++|++|+||++|.++.+.
T Consensus 184 ~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l~~vtvPflilHG~dD~VTDp~ 263 (313)
T KOG1455|consen 184 SKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNLNEVTVPFLILHGTDDKVTDPK 263 (313)
T ss_pred HHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhcccccccEEEEecCCCcccCcH
Confidence 222332220 00 0000000 0000 0001111 12455778899999999999999999999
Q ss_pred HHHHHHHHcC-CCcEEEEeCC-CCCCC------ChhHHHHHHHHHHHhh
Q 013268 242 HSDLIFNAYA-GDKNIIKFDG-DHNSS------RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 242 ~~~~l~~~l~-~~~~~~~~~g-gH~~~------~~~~~~~~i~~Fl~~~ 282 (446)
.++.+++..+ .++++.+||| -|... +.+.++..|++||+++
T Consensus 264 ~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl~~r 312 (313)
T KOG1455|consen 264 VSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWLDER 312 (313)
T ss_pred HHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHHHhc
Confidence 9999999876 6899999999 88755 3356778889999875
No 6
>PRK10749 lysophospholipase L2; Provisional
Probab=99.93 E-value=5.7e-24 Score=209.01 Aligned_cols=242 Identities=15% Similarity=0.144 Sum_probs=164.8
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC--
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-- 113 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~-- 113 (446)
.+++..+...||.++++..|.|. .++++||++||++++...|..++..|+++||+|+++|+||||.|++....
T Consensus 29 ~~~~~~~~~~~g~~l~~~~~~~~-----~~~~~vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~ 103 (330)
T PRK10749 29 QREEAEFTGVDDIPIRFVRFRAP-----HHDRVVVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPH 103 (330)
T ss_pred hccceEEEcCCCCEEEEEEccCC-----CCCcEEEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCC
Confidence 35667788899999999988753 34579999999999988899999999999999999999999999754221
Q ss_pred ----CCcc-hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH-----HHHHH---H
Q 013268 114 ----LGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLE---L 179 (446)
Q Consensus 114 ----~~~~-~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~-----~~~~~---~ 179 (446)
..+. .++|+..+++.+....+..+++++||||||.+++.++..+|+ ++++|+.+|..... ..... .
T Consensus 104 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~ 183 (330)
T PRK10749 104 RGHVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMARRILNW 183 (330)
T ss_pred cCccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHHHHHHHH
Confidence 1121 256777777776555566899999999999999999999998 99999998865321 11111 1
Q ss_pred HHHHhh----------hCCchh---------HHHHHHHHHHHHhhhhc------c----cccc--cchhhhCCCCCCcEE
Q 013268 180 VDVYKI----------RLPKFT---------VKMAVQYMRRVIQKKAK------F----DIMD--LNCLKLAPKTFIPAL 228 (446)
Q Consensus 180 ~~~~~~----------~~~~~~---------~~~~~~~~~~~~~~~~~------~----~~~~--~~~~~~l~~i~~PvL 228 (446)
...... .....+ ........+........ + .... ......+.++++|+|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~L 263 (330)
T PRK10749 184 AEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILAGEQVLAGAGDITTPLL 263 (330)
T ss_pred HHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHHHHHHHhhccCCCCCEE
Confidence 110000 000000 00001111111111000 0 0000 022345678999999
Q ss_pred EEEeCCCCCCChHHHHHHHHHcC------CCcEEEEeCC-CCCCC-C----hhHHHHHHHHHHHhh
Q 013268 229 FGHASEDKFIRARHSDLIFNAYA------GDKNIIKFDG-DHNSS-R----PQFYYDSVSIFFYNV 282 (446)
Q Consensus 229 ii~G~~D~~vp~~~~~~l~~~l~------~~~~~~~~~g-gH~~~-~----~~~~~~~i~~Fl~~~ 282 (446)
+++|++|.+++++.++.+++.++ .+++++++++ +|... + .+.+++.|.+||+++
T Consensus 264 ii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 264 LLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 99999999999999999988764 2457899998 99866 2 356888888998764
No 7
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.93 E-value=1.7e-24 Score=195.83 Aligned_cols=218 Identities=22% Similarity=0.355 Sum_probs=175.8
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCC
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSL 114 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~~~~~ 114 (446)
..+.+..++.+|..+.+..+.|. ....++|+++||...+......+...|.. -+++|+.+||+|+|.|.|.+...
T Consensus 34 ~v~v~~~~t~rgn~~~~~y~~~~----~~~~~~lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~ 109 (258)
T KOG1552|consen 34 FVEVFKVKTSRGNEIVCMYVRPP----EAAHPTLLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSER 109 (258)
T ss_pred ccceEEeecCCCCEEEEEEEcCc----cccceEEEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccc
Confidence 45667788999999999988885 24679999999998777766666666655 38999999999999999998877
Q ss_pred CcchHHHHHHHHHHHHhcCC-CCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHH
Q 013268 115 GWHEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (446)
Q Consensus 115 ~~~~~~D~~~~i~~l~~~~~-~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (446)
+. .+|+.++.+||++..+ .++|+|+|+|+|+..++.+|++.| ++++|+.+|+.+..+.+.......
T Consensus 110 n~--y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~~tv~Lasr~~-~~alVL~SPf~S~~rv~~~~~~~~---------- 176 (258)
T KOG1552|consen 110 NL--YADIKAVYEWLRNRYGSPERIILYGQSIGTVPTVDLASRYP-LAAVVLHSPFTSGMRVAFPDTKTT---------- 176 (258)
T ss_pred cc--hhhHHHHHHHHHhhcCCCceEEEEEecCCchhhhhHhhcCC-cceEEEeccchhhhhhhccCcceE----------
Confidence 43 7999999999999984 699999999999999999999999 999999999998765543221100
Q ss_pred HHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC-ChhHH
Q 013268 194 MAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQFY 271 (446)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~-~~~~~ 271 (446)
+..........++.|++|+|++||++|.+++..+..+++++.++..+-.+..| ||... ...++
T Consensus 177 ---------------~~~d~f~~i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~g~gH~~~~~~~~y 241 (258)
T KOG1552|consen 177 ---------------YCFDAFPNIEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVKGAGHNDIELYPEY 241 (258)
T ss_pred ---------------EeeccccccCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEecCCCcccccCHHH
Confidence 11111122467888999999999999999999999999999997655555555 99877 56689
Q ss_pred HHHHHHHHHhhcCC
Q 013268 272 YDSVSIFFYNVLHP 285 (446)
Q Consensus 272 ~~~i~~Fl~~~L~~ 285 (446)
.+.+..|+......
T Consensus 242 i~~l~~f~~~~~~~ 255 (258)
T KOG1552|consen 242 IEHLRRFISSVLPS 255 (258)
T ss_pred HHHHHHHHHHhccc
Confidence 99999999877654
No 8
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=1.2e-23 Score=210.05 Aligned_cols=244 Identities=18% Similarity=0.232 Sum_probs=171.0
Q ss_pred eEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC-C
Q 013268 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL-G 115 (446)
Q Consensus 37 ~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~-~ 115 (446)
.....+...+|..+.+..|.|. .+.++++||++||++++...|..++..|+++||+|+++|+||||.|++..... .
T Consensus 110 ~~~~~~~~~~~~~l~~~~~~p~---~~~~~~~Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~ 186 (395)
T PLN02652 110 WATSLFYGARRNALFCRSWAPA---AGEMRGILIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPS 186 (395)
T ss_pred EEEEEEECCCCCEEEEEEecCC---CCCCceEEEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcC
Confidence 4667788899999999999885 34567899999999999888999999999999999999999999998753211 2
Q ss_pred cc-hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC----CccEEEEeCCccCHHH---HHHHHHHHHhhhC
Q 013268 116 WH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFSDLFD---LMLELVDVYKIRL 187 (446)
Q Consensus 116 ~~-~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p----~v~~lVl~sp~~~~~~---~~~~~~~~~~~~~ 187 (446)
.. ..+|+..+++++.......+++++||||||.+++.++. +| .++++|+.+|+..... .............
T Consensus 187 ~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a~-~p~~~~~v~glVL~sP~l~~~~~~~~~~~~~~l~~~~~ 265 (395)
T PLN02652 187 LDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAAS-YPSIEDKLEGIVLTSPALRVKPAHPIVGAVAPIFSLVA 265 (395)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHHh-ccCcccccceEEEECcccccccchHHHHHHHHHHHHhC
Confidence 11 26788999999987655568999999999999998764 44 3899999998754321 0000101111111
Q ss_pred CchhHHHH----------HHHHHHHHhhh----------hcccccc--cchhhhCCCCCCcEEEEEeCCCCCCChHHHHH
Q 013268 188 PKFTVKMA----------VQYMRRVIQKK----------AKFDIMD--LNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (446)
Q Consensus 188 ~~~~~~~~----------~~~~~~~~~~~----------~~~~~~~--~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (446)
|.+..... ........... ....... ......+.++++|+|++||++|.++|++.++.
T Consensus 266 p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~L~~I~vPvLIi~G~~D~vvp~~~a~~ 345 (395)
T PLN02652 266 PRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRNFKSVTVPFMVLHGTADRVTDPLASQD 345 (395)
T ss_pred CCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhhcccCCCCEEEEEeCCCCCCCHHHHHH
Confidence 11100000 00000000000 0000000 01234567899999999999999999999999
Q ss_pred HHHHcCC-CcEEEEeCC-CCCCC---ChhHHHHHHHHHHHhhcC
Q 013268 246 IFNAYAG-DKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 246 l~~~l~~-~~~~~~~~g-gH~~~---~~~~~~~~i~~Fl~~~L~ 284 (446)
+++.+.. .++++++++ +|... .++++++.+.+||..++.
T Consensus 346 l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL~~~~~ 389 (395)
T PLN02652 346 LYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWMEKRLD 389 (395)
T ss_pred HHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHHHHHhh
Confidence 9998764 578899998 89854 578999999999998875
No 9
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.92 E-value=2e-23 Score=202.60 Aligned_cols=243 Identities=14% Similarity=0.124 Sum_probs=152.7
Q ss_pred CceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc
Q 013268 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (446)
Q Consensus 33 ~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~ 112 (446)
.++..+.+++...+|.++... |... +.+..|+|||+||++++...|..++..|.++||+|+++|+||||.|.....
T Consensus 17 ~~~~~~~~~~~~~~~~~~~i~-y~~~---G~~~~~~lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~ 92 (302)
T PRK00870 17 YPFAPHYVDVDDGDGGPLRMH-YVDE---GPADGPPVLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTR 92 (302)
T ss_pred CCCCceeEeecCCCCceEEEE-EEec---CCCCCCEEEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCC
Confidence 344555677776667654432 2222 222468999999999999999999999988899999999999999975432
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH-----HHHHHHHHHHhhh
Q 013268 113 SLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----DLMLELVDVYKIR 186 (446)
Q Consensus 113 ~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~-----~~~~~~~~~~~~~ 186 (446)
...+ ..+++.+.+..+.+..+.++++++||||||.+++.+|..+|+ |+++|++++..... .....+.. ....
T Consensus 93 ~~~~-~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~-~~~~ 170 (302)
T PRK00870 93 REDY-TYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRA-FSQY 170 (302)
T ss_pred cccC-CHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhc-cccc
Confidence 2111 133333333333344477899999999999999999999998 99999988642110 01111100 0000
Q ss_pred CC--------------chhHHHHHHHHH--------HHHhhhhcc---c------ccccchhhhCCCCCCcEEEEEeCCC
Q 013268 187 LP--------------KFTVKMAVQYMR--------RVIQKKAKF---D------IMDLNCLKLAPKTFIPALFGHASED 235 (446)
Q Consensus 187 ~~--------------~~~~~~~~~~~~--------~~~~~~~~~---~------~~~~~~~~~l~~i~~PvLii~G~~D 235 (446)
.+ .........+.. ......... . .........+.++++|+++|+|++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D 250 (302)
T PRK00870 171 SPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSD 250 (302)
T ss_pred CchhhHHHHhhccccccCCHHHHHHhhcccCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCC
Confidence 00 000000000000 000000000 0 0000112346789999999999999
Q ss_pred CCCChHHHHHHHHHcCCCc--EEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 236 KFIRARHSDLIFNAYAGDK--NIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 236 ~~vp~~~~~~l~~~l~~~~--~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
.++|... +.+.+.+++.. .+.++++ ||+.. .|+++.+.|.+|++++
T Consensus 251 ~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~ 301 (302)
T PRK00870 251 PITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRAT 301 (302)
T ss_pred CcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHHhcC
Confidence 9999866 77888877532 3677887 99977 7899999999999764
No 10
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.92 E-value=1.9e-23 Score=200.06 Aligned_cols=229 Identities=13% Similarity=0.157 Sum_probs=152.0
Q ss_pred ECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-HHH
Q 013268 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDD 121 (446)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~-~~D 121 (446)
...+|.++++..+. .+...++|||+||++++...|..++..|.+ +|+|+++|+||||.|+.......+.. .++
T Consensus 7 ~~~~~~~~~~~~~~-----~~~~~~plvllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~ 80 (276)
T TIGR02240 7 IDLDGQSIRTAVRP-----GKEGLTPLLIFNGIGANLELVFPFIEALDP-DLEVIAFDVPGVGGSSTPRHPYRFPGLAKL 80 (276)
T ss_pred eccCCcEEEEEEec-----CCCCCCcEEEEeCCCcchHHHHHHHHHhcc-CceEEEECCCCCCCCCCCCCcCcHHHHHHH
Confidence 33578888875542 122347899999999999999999998876 69999999999999985433222211 344
Q ss_pred HHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH------HHHHHHHH--HHhhhCC--ch
Q 013268 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVD--VYKIRLP--KF 190 (446)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~------~~~~~~~~--~~~~~~~--~~ 190 (446)
+.++++.+ +.++++|+||||||.+++.+|.++|+ |+++|++++..... ........ ....... ..
T Consensus 81 ~~~~i~~l----~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (276)
T TIGR02240 81 AARMLDYL----DYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGKPKVLMMMASPRRYIQPSHGIHI 156 (276)
T ss_pred HHHHHHHh----CcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCchhHHHHhcCchhhhccccccch
Confidence 44444444 67889999999999999999999998 99999998765321 11000000 0000000 00
Q ss_pred hH-----------HHHHHHHHHHHhhhhc-------ccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC
Q 013268 191 TV-----------KMAVQYMRRVIQKKAK-------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG 252 (446)
Q Consensus 191 ~~-----------~~~~~~~~~~~~~~~~-------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~ 252 (446)
.. ......... ...... ......+....++++++|+|+++|++|++++++.++.+.+.+++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~~ 235 (276)
T TIGR02240 157 APDIYGGAFRRDPELAMAHASK-VRSGGKLGYYWQLFAGLGWTSIHWLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIPN 235 (276)
T ss_pred hhhhccceeeccchhhhhhhhh-cccCCCchHHHHHHHHcCCchhhHhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCCC
Confidence 00 000000000 000000 00011122344678999999999999999999999999998875
Q ss_pred CcEEEEeCCCCCCC--ChhHHHHHHHHHHHhhc
Q 013268 253 DKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 253 ~~~~~~~~ggH~~~--~~~~~~~~i~~Fl~~~L 283 (446)
.+++++++||+.. .|+++.+.|.+|+++.-
T Consensus 236 -~~~~~i~~gH~~~~e~p~~~~~~i~~fl~~~~ 267 (276)
T TIGR02240 236 -AELHIIDDGHLFLITRAEAVAPIIMKFLAEER 267 (276)
T ss_pred -CEEEEEcCCCchhhccHHHHHHHHHHHHHHhh
Confidence 5677888899976 78899999999998764
No 11
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.92 E-value=3.2e-24 Score=186.88 Aligned_cols=249 Identities=18% Similarity=0.369 Sum_probs=189.9
Q ss_pred hhhccCCCCCCCCCccccccccccCCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHH
Q 013268 7 NFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA 86 (446)
Q Consensus 7 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~ 86 (446)
+.++.|+...-.+.....++++ +++| +.+++++.|..+|.+++.. .+.+.|+++++||..|+.......+
T Consensus 29 ~~LvYps~pqgsR~~vptP~~~---n~py--e~i~l~T~D~vtL~a~~~~-----~E~S~pTlLyfh~NAGNmGhr~~i~ 98 (300)
T KOG4391|consen 29 KTLVYPSFPQGSRENVPTPKEF---NMPY--ERIELRTRDKVTLDAYLML-----SESSRPTLLYFHANAGNMGHRLPIA 98 (300)
T ss_pred ceeeccCcccccccCCCCcccc---CCCc--eEEEEEcCcceeEeeeeec-----ccCCCceEEEEccCCCcccchhhHH
Confidence 4455666544444544555555 4445 8888999999999998776 3358999999999999988877776
Q ss_pred HHh-ccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccE
Q 013268 87 VIL-LPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAG 162 (446)
Q Consensus 87 ~~L-~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~ 162 (446)
..+ ..-+.+|+.+++||+|.|.|.+...+. .-|..++++|+..+... .+++++|.|+||.+|+.+|+++.+ +.+
T Consensus 99 ~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL--~lDs~avldyl~t~~~~dktkivlfGrSlGGAvai~lask~~~ri~~ 176 (300)
T KOG4391|consen 99 RVFYVNLKMNVLIVSYRGYGKSEGSPSEEGL--KLDSEAVLDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDRISA 176 (300)
T ss_pred HHHHHHcCceEEEEEeeccccCCCCccccce--eccHHHHHHHHhcCccCCcceEEEEecccCCeeEEEeeccchhheee
Confidence 655 445899999999999999999988876 47899999999998665 789999999999999999999887 999
Q ss_pred EEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHH
Q 013268 163 MVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (446)
Q Consensus 163 lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (446)
+|+-..+.+...........+ +.+ ++..+..... ......+.+.+.|.|++.|.+|.+||+.+
T Consensus 177 ~ivENTF~SIp~~~i~~v~p~-------~~k----~i~~lc~kn~------~~S~~ki~~~~~P~LFiSGlkDelVPP~~ 239 (300)
T KOG4391|consen 177 IIVENTFLSIPHMAIPLVFPF-------PMK----YIPLLCYKNK------WLSYRKIGQCRMPFLFISGLKDELVPPVM 239 (300)
T ss_pred eeeechhccchhhhhheeccc-------hhh----HHHHHHHHhh------hcchhhhccccCceEEeecCccccCCcHH
Confidence 999999888754433222111 111 1111111100 01124455677899999999999999999
Q ss_pred HHHHHHHcCC-CcEEEEeCC-CCCCC-ChhHHHHHHHHHHHhhcC
Q 013268 243 SDLIFNAYAG-DKNIIKFDG-DHNSS-RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 243 ~~~l~~~l~~-~~~~~~~~g-gH~~~-~~~~~~~~i~~Fl~~~L~ 284 (446)
++.+++..+. .+++..||+ .|+.. -.+.+++.|.+|+.+.-.
T Consensus 240 Mr~Ly~~c~S~~Krl~eFP~gtHNDT~i~dGYfq~i~dFlaE~~~ 284 (300)
T KOG4391|consen 240 MRQLYELCPSRTKRLAEFPDGTHNDTWICDGYFQAIEDFLAEVVK 284 (300)
T ss_pred HHHHHHhCchhhhhheeCCCCccCceEEeccHHHHHHHHHHHhcc
Confidence 9999999884 577889987 89977 577899999999998865
No 12
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.92 E-value=1.3e-22 Score=204.20 Aligned_cols=235 Identities=17% Similarity=0.191 Sum_probs=165.2
Q ss_pred CceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCCh-hhHHHHHHHhccCCcEEEEeCCCCCCCCCCCC
Q 013268 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (446)
Q Consensus 33 ~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~-~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~ 111 (446)
.++..+.+.++..+|.+|.++++.|. ..++.|+||++||+++.. ..|..++..|+++||+|+++|+||+|.|.+..
T Consensus 164 ~~~~~e~v~i~~~~g~~l~g~l~~P~---~~~~~P~Vli~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~ 240 (414)
T PRK05077 164 LPGELKELEFPIPGGGPITGFLHLPK---GDGPFPTVLVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWK 240 (414)
T ss_pred cCCceEEEEEEcCCCcEEEEEEEECC---CCCCccEEEEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCC
Confidence 34456888899889989999999997 346789999888888764 45777888999999999999999999997543
Q ss_pred cCCCcchHHHHHHHHHHHHhcCC--CCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH-HH---HHH----HH
Q 013268 112 VSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF-DL---MLE----LV 180 (446)
Q Consensus 112 ~~~~~~~~~D~~~~i~~l~~~~~--~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~-~~---~~~----~~ 180 (446)
... .......++++++..... .++|+++||||||++++.+|..+|+ |+++|+++|..... .. ... ..
T Consensus 241 ~~~--d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p~~~~ 318 (414)
T PRK05077 241 LTQ--DSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVPEMYL 318 (414)
T ss_pred ccc--cHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhchHHHH
Confidence 211 112334578889987753 4899999999999999999999885 99999998876411 10 000 00
Q ss_pred HHHhhh--CCchhHHHHHHHHHHHHhhhhcccccccchhhh-CCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEE
Q 013268 181 DVYKIR--LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNII 257 (446)
Q Consensus 181 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~ 257 (446)
..+... .+.......... ...+.. ..... ..++++|+|+|+|++|+++|++.++.+.+..+ +.+++
T Consensus 319 ~~la~~lg~~~~~~~~l~~~-------l~~~sl---~~~~~l~~~i~~PvLiI~G~~D~ivP~~~a~~l~~~~~-~~~l~ 387 (414)
T PRK05077 319 DVLASRLGMHDASDEALRVE-------LNRYSL---KVQGLLGRRCPTPMLSGYWKNDPFSPEEDSRLIASSSA-DGKLL 387 (414)
T ss_pred HHHHHHhCCCCCChHHHHHH-------hhhccc---hhhhhhccCCCCcEEEEecCCCCCCCHHHHHHHHHhCC-CCeEE
Confidence 000000 000000000000 001111 01111 25789999999999999999999998887776 45688
Q ss_pred EeCCCCCCCChhHHHHHHHHHHHhhc
Q 013268 258 KFDGDHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 258 ~~~ggH~~~~~~~~~~~i~~Fl~~~L 283 (446)
++++.|....++.+.+.+.+||.++|
T Consensus 388 ~i~~~~~~e~~~~~~~~i~~wL~~~l 413 (414)
T PRK05077 388 EIPFKPVYRNFDKALQEISDWLEDRL 413 (414)
T ss_pred EccCCCccCCHHHHHHHHHHHHHHHh
Confidence 88887766788999999999999876
No 13
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.92 E-value=5.4e-24 Score=186.97 Aligned_cols=213 Identities=18% Similarity=0.227 Sum_probs=160.8
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~-~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
....||++||+.|+..+...+++.|.++||.|.+|.+||||.........++.+ .+|+.+..++|.+. +.+.|.++|.
T Consensus 14 G~~AVLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~-gy~eI~v~Gl 92 (243)
T COG1647 14 GNRAVLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEA-GYDEIAVVGL 92 (243)
T ss_pred CCEEEEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHc-CCCeEEEEee
Confidence 348999999999999999999999999999999999999999886666665544 78899999999876 6789999999
Q ss_pred chhHHHHHHHHHhCCCccEEEEeCCccCHHH---HHHHHHH---HHhhhCCchhHHHHHHHHHHHH----hhhhcccccc
Q 013268 144 SMGAVTSLLYGAEDPSIAGMVLDSAFSDLFD---LMLELVD---VYKIRLPKFTVKMAVQYMRRVI----QKKAKFDIMD 213 (446)
Q Consensus 144 S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 213 (446)
||||.+++.+|..+| ++++|.++++....+ .+..++. ... .++..........+.... .....+...-
T Consensus 93 SmGGv~alkla~~~p-~K~iv~m~a~~~~k~~~~iie~~l~y~~~~k-k~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i 170 (243)
T COG1647 93 SMGGVFALKLAYHYP-PKKIVPMCAPVNVKSWRIIIEGLLEYFRNAK-KYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLI 170 (243)
T ss_pred cchhHHHHHHHhhCC-ccceeeecCCcccccchhhhHHHHHHHHHhh-hccCCCHHHHHHHHHHhhcchHHHHHHHHHHH
Confidence 999999999999999 999999998876322 1222222 111 112111222222222111 1111222222
Q ss_pred cchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC-CCcEEEEeCC-CCCCC---ChhHHHHHHHHHHH
Q 013268 214 LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (446)
Q Consensus 214 ~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~~~~~~g-gH~~~---~~~~~~~~i~~Fl~ 280 (446)
.+....+..|..|+++++|.+|++||.+.+..+++... .++++.++++ ||... +.+.+.+.|..||+
T Consensus 171 ~~~~~~~~~I~~pt~vvq~~~D~mv~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL~ 242 (243)
T COG1647 171 KDARRSLDKIYSPTLVVQGRQDEMVPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFLE 242 (243)
T ss_pred HHHHhhhhhcccchhheecccCCCCCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHhh
Confidence 24456777899999999999999999999999998875 6789999998 99866 67789999999986
No 14
>PLN02511 hydrolase
Probab=99.91 E-value=2.1e-22 Score=201.70 Aligned_cols=270 Identities=16% Similarity=0.127 Sum_probs=171.1
Q ss_pred CCCCCCccccccccc---------cCCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-H-H
Q 013268 15 AEYNPDQYLWERDFM---------LAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-A-N 83 (446)
Q Consensus 15 ~~~~~~~~~~~~~~~---------~~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-~-~ 83 (446)
..|.|..|+.+..++ .....|+++ .+...||..+...++.+.........|+||++||++++... | .
T Consensus 42 ~~y~p~~wl~n~h~qT~~~~~~~~~~~~~~~re--~l~~~DG~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~ 119 (388)
T PLN02511 42 RPYDAFPLLGNRHVETIFASFFRSLPAVRYRRE--CLRTPDGGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVR 119 (388)
T ss_pred CCccCCccCCCccHHHhhHHHhcCCCCCceeEE--EEECCCCCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHH
Confidence 367887777777665 223445444 56778999988776543211123457899999999876543 4 4
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCCCCCCcC-CCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC---
Q 013268 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS--- 159 (446)
Q Consensus 84 ~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~-~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~--- 159 (446)
.++..+.++||+|+++|+||||.|...... ......+|+.++++++..+.+..+++++||||||.+++.++.++++
T Consensus 120 ~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~SlGg~i~~~yl~~~~~~~~ 199 (388)
T PLN02511 120 HMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSLGANILVNYLGEEGENCP 199 (388)
T ss_pred HHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEechhHHHHHHHHHhcCCCCC
Confidence 567777788999999999999999743211 1112378999999999988766799999999999999999999885
Q ss_pred ccEEEEeCCccCHHHHHHHHHH------------HHhh-------hC---C-chhHHH------HHHHHHHHHhhhhccc
Q 013268 160 IAGMVLDSAFSDLFDLMLELVD------------VYKI-------RL---P-KFTVKM------AVQYMRRVIQKKAKFD 210 (446)
Q Consensus 160 v~~lVl~sp~~~~~~~~~~~~~------------~~~~-------~~---~-~~~~~~------~~~~~~~~~~~~~~~~ 210 (446)
|+++++++++.++......+.. .... .+ + .+.... ..++..........+.
T Consensus 200 v~~~v~is~p~~l~~~~~~~~~~~~~~y~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~t~~~~gf~ 279 (388)
T PLN02511 200 LSGAVSLCNPFDLVIADEDFHKGFNNVYDKALAKALRKIFAKHALLFEGLGGEYNIPLVANAKTVRDFDDGLTRVSFGFK 279 (388)
T ss_pred ceEEEEECCCcCHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCccCHHHHHhCCCHHHHHHhhhhhcCCCC
Confidence 7888887776654211100000 0000 00 0 000000 0000000000001111
Q ss_pred c-----cccchhhhCCCCCCcEEEEEeCCCCCCChHHH-HHHHHHcCCCcEEEEeCC-CCCCC--ChhH------HHHHH
Q 013268 211 I-----MDLNCLKLAPKTFIPALFGHASEDKFIRARHS-DLIFNAYAGDKNIIKFDG-DHNSS--RPQF------YYDSV 275 (446)
Q Consensus 211 ~-----~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~-~~l~~~l~~~~~~~~~~g-gH~~~--~~~~------~~~~i 275 (446)
. ...+....+++|++|+|+|+|++|+++|.+.. ....+..+ +.+++++++ ||... .++. +.+.+
T Consensus 280 ~~~~yy~~~s~~~~L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p-~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i 358 (388)
T PLN02511 280 SVDAYYSNSSSSDSIKHVRVPLLCIQAANDPIAPARGIPREDIKANP-NCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVV 358 (388)
T ss_pred CHHHHHHHcCchhhhccCCCCeEEEEcCCCCcCCcccCcHhHHhcCC-CEEEEECCCcceeccccCCCCCCCCccHHHHH
Confidence 0 01234457788999999999999999998754 33444444 566777775 99866 3433 57889
Q ss_pred HHHHHhhcCCCC
Q 013268 276 SIFFYNVLHPPQ 287 (446)
Q Consensus 276 ~~Fl~~~L~~~~ 287 (446)
.+||+.......
T Consensus 359 ~~Fl~~~~~~~~ 370 (388)
T PLN02511 359 MEFLEALEEGKS 370 (388)
T ss_pred HHHHHHHHHhcc
Confidence 999988875433
No 15
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.91 E-value=7.2e-23 Score=197.02 Aligned_cols=245 Identities=23% Similarity=0.289 Sum_probs=172.4
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCC-CCCcCC
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD-GDYVSL 114 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~-~~~~~~ 114 (446)
...+..+...||..+.+..|.+. ..+..+||++||++.+...|..++..|..+||.|+++|+||||.|. +.....
T Consensus 8 ~~~~~~~~~~d~~~~~~~~~~~~----~~~~g~Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~ 83 (298)
T COG2267 8 TRTEGYFTGADGTRLRYRTWAAP----EPPKGVVVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHV 83 (298)
T ss_pred ccccceeecCCCceEEEEeecCC----CCCCcEEEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCc
Confidence 44667788899999999999874 2334899999999999999999999999999999999999999997 332222
Q ss_pred -Ccch-HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH--HHHHHHHH----Hhh
Q 013268 115 -GWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELVDV----YKI 185 (446)
Q Consensus 115 -~~~~-~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~--~~~~~~~~----~~~ 185 (446)
.+.. ..|+..+++.+.......+++++||||||.+++.++..++. |+++|+.+|+..+.. ........ ...
T Consensus 84 ~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~ 163 (298)
T COG2267 84 DSFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGGAILRLILARLALKLLGR 163 (298)
T ss_pred hhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCChhHHHHHHHHHhcccccc
Confidence 1222 66777777777665455899999999999999999999987 999999999887662 11111111 111
Q ss_pred hCCchhHHH-------------HHHHHHHHHhhhh-ccc------------ccccchhhhCCCCCCcEEEEEeCCCCCCC
Q 013268 186 RLPKFTVKM-------------AVQYMRRVIQKKA-KFD------------IMDLNCLKLAPKTFIPALFGHASEDKFIR 239 (446)
Q Consensus 186 ~~~~~~~~~-------------~~~~~~~~~~~~~-~~~------------~~~~~~~~~l~~i~~PvLii~G~~D~~vp 239 (446)
..|.+.... ............. .+. ...........++++|+|+++|++|.+++
T Consensus 164 ~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~~~~~~~~~~~~~PvLll~g~~D~vv~ 243 (298)
T COG2267 164 IRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGRVPALRDAPAIALPVLLLQGGDDRVVD 243 (298)
T ss_pred cccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhcccchhccccccCCEEEEecCCCcccc
Confidence 112221111 0001111110000 000 00011223356689999999999999999
Q ss_pred -hHHHHHHHHHcCC-CcEEEEeCC-CCCCC---Ch--hHHHHHHHHHHHhhcC
Q 013268 240 -ARHSDLIFNAYAG-DKNIIKFDG-DHNSS---RP--QFYYDSVSIFFYNVLH 284 (446)
Q Consensus 240 -~~~~~~l~~~l~~-~~~~~~~~g-gH~~~---~~--~~~~~~i~~Fl~~~L~ 284 (446)
.+...++++.++. ++++++++| .|... .. +++++.+.+|+.+.+.
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~~ 296 (298)
T COG2267 244 NVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWLAEALP 296 (298)
T ss_pred CcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHHHhhcc
Confidence 7989999888774 468999998 88855 33 7788889999988764
No 16
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.91 E-value=3.3e-22 Score=191.69 Aligned_cols=211 Identities=16% Similarity=0.158 Sum_probs=137.4
Q ss_pred CCcEEEEECCCCCChhhHHH---HHHHhccCCcEEEEeCCCCCCCCCCCCcCC--CcchHHHHHHHHHHHHhcCCCCcEE
Q 013268 65 PLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRIG 139 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~---~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~--~~~~~~D~~~~i~~l~~~~~~~~i~ 139 (446)
..|+||++||++++...|.. .+..+++.||+|+++|+||||.|+...... .....+++.++++.+ +.++++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l----~~~~~~ 104 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDAL----DIEKAH 104 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHc----CCCCee
Confidence 45789999999988766653 345677779999999999999998643221 111244555544444 778999
Q ss_pred EEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH--------HHHHHHHHHHhh--------h-----C-CchhHHHHH
Q 013268 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--------DLMLELVDVYKI--------R-----L-PKFTVKMAV 196 (446)
Q Consensus 140 lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~--------~~~~~~~~~~~~--------~-----~-~~~~~~~~~ 196 (446)
++||||||.+++.+|.++|+ ++++|++++..... .........+.. . . +........
T Consensus 105 lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (282)
T TIGR03343 105 LVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYAEPSYETLKQMLNVFLFDQSLITEELL 184 (282)
T ss_pred EEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhcCCCHHHHHHHHhhCccCcccCcHHHH
Confidence 99999999999999999997 99999987642100 001111100000 0 0 000000000
Q ss_pred H-HH----------HHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCC
Q 013268 197 Q-YM----------RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (446)
Q Consensus 197 ~-~~----------~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~ 264 (446)
+ .. ...............+....++++++|+|+++|++|.+++++.++++.+.+++ .+++++++ ||+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~~v~~~~~~~~~~~~~~-~~~~~i~~agH~ 263 (282)
T TIGR03343 185 QGRWENIQRQPEHLKNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDRFVPLDHGLKLLWNMPD-AQLHVFSRCGHW 263 (282)
T ss_pred HhHHHHhhcCHHHHHHHHHhccccccccchHHHHHhhCCCCEEEEEccCCCcCCchhHHHHHHhCCC-CEEEEeCCCCcC
Confidence 0 00 00000000001112233445778999999999999999999999999998874 66778886 999
Q ss_pred CC--ChhHHHHHHHHHHH
Q 013268 265 SS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 265 ~~--~~~~~~~~i~~Fl~ 280 (446)
.. +|+.+.+.|.+|+.
T Consensus 264 ~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 264 AQWEHADAFNRLVIDFLR 281 (282)
T ss_pred CcccCHHHHHHHHHHHhh
Confidence 77 78899999999986
No 17
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=5.4e-22 Score=191.80 Aligned_cols=229 Identities=15% Similarity=0.184 Sum_probs=146.5
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC----CCcchHH
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----LGWHEKD 120 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~----~~~~~~~ 120 (446)
.+|..+++... + .+.|+|||+||++++...|..++..|+++ |+|+++|+||||.|+..... ......+
T Consensus 15 ~~~~~i~y~~~------G-~~~~~vlllHG~~~~~~~w~~~~~~L~~~-~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~ 86 (294)
T PLN02824 15 WKGYNIRYQRA------G-TSGPALVLVHGFGGNADHWRKNTPVLAKS-HRVYAIDLLGYGYSDKPNPRSAPPNSFYTFE 86 (294)
T ss_pred EcCeEEEEEEc------C-CCCCeEEEECCCCCChhHHHHHHHHHHhC-CeEEEEcCCCCCCCCCCccccccccccCCHH
Confidence 36777776543 1 23489999999999999999999999876 79999999999999854211 0112234
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH---------HH-HHHHHHHHHhh----
Q 013268 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---------FD-LMLELVDVYKI---- 185 (446)
Q Consensus 121 D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~---------~~-~~~~~~~~~~~---- 185 (446)
++.+.+..+.+..+.++++|+||||||.+++.+|.++|+ |+++|++++.... .. ....+......
T Consensus 87 ~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (294)
T PLN02824 87 TWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVG 166 (294)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHH
Confidence 444444333333367899999999999999999999998 9999998864311 01 11001000000
Q ss_pred -----hC--CchhHHH-----------HHHHHHHHHhhh---------hcc-c-ccccchhhhCCCCCCcEEEEEeCCCC
Q 013268 186 -----RL--PKFTVKM-----------AVQYMRRVIQKK---------AKF-D-IMDLNCLKLAPKTFIPALFGHASEDK 236 (446)
Q Consensus 186 -----~~--~~~~~~~-----------~~~~~~~~~~~~---------~~~-~-~~~~~~~~~l~~i~~PvLii~G~~D~ 236 (446)
.. +...... ............ ..+ . .........++++++|+|+|+|++|.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lvi~G~~D~ 246 (294)
T PLN02824 167 KAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFISYSGGPLPEELLPAVKCPVLIAWGEKDP 246 (294)
T ss_pred HHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhccccccchHHHHhhcCCCeEEEEecCCC
Confidence 00 0000000 000000000000 000 0 00011234567899999999999999
Q ss_pred CCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 237 FIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 237 ~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
.++.+.++.+.+..+ ..+++++++ ||+.. +|+++.+.|.+|++++
T Consensus 247 ~~~~~~~~~~~~~~~-~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~~ 294 (294)
T PLN02824 247 WEPVELGRAYANFDA-VEDFIVLPGVGHCPQDEAPELVNPLIESFVARH 294 (294)
T ss_pred CCChHHHHHHHhcCC-ccceEEeCCCCCChhhhCHHHHHHHHHHHHhcC
Confidence 999999988766554 456888876 99977 8899999999999763
No 18
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.90 E-value=2.8e-22 Score=193.92 Aligned_cols=228 Identities=14% Similarity=0.119 Sum_probs=146.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~ 124 (446)
.+|.++.+..+ ++.|+|||+||++++...|..++..|+++ |+|+++|+||||.|+....... .++..+
T Consensus 14 ~~g~~i~y~~~--------G~g~~vvllHG~~~~~~~w~~~~~~L~~~-~~via~D~~G~G~S~~~~~~~~---~~~~a~ 81 (295)
T PRK03592 14 VLGSRMAYIET--------GEGDPIVFLHGNPTSSYLWRNIIPHLAGL-GRCLAPDLIGMGASDKPDIDYT---FADHAR 81 (295)
T ss_pred ECCEEEEEEEe--------CCCCEEEEECCCCCCHHHHHHHHHHHhhC-CEEEEEcCCCCCCCCCCCCCCC---HHHHHH
Confidence 47888887654 24579999999999999999999999887 4999999999999986543322 233333
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH---H---HHHHHHHHHHhhhC----------
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL---F---DLMLELVDVYKIRL---------- 187 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~---~---~~~~~~~~~~~~~~---------- 187 (446)
.+..+.+..+.++++++||||||.+|+.++..+|+ |+++|++++.... . .........+....
T Consensus 82 dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (295)
T PRK03592 82 YLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALRSPGEGEEMVLEEN 161 (295)
T ss_pred HHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHhCcccccccccchh
Confidence 33333333467899999999999999999999998 9999999874321 0 11111111111000
Q ss_pred -------Cc-----hhHHHHHHHHHHH---------Hhhhhcccc----c-----ccchhhhCCCCCCcEEEEEeCCCCC
Q 013268 188 -------PK-----FTVKMAVQYMRRV---------IQKKAKFDI----M-----DLNCLKLAPKTFIPALFGHASEDKF 237 (446)
Q Consensus 188 -------~~-----~~~~~~~~~~~~~---------~~~~~~~~~----~-----~~~~~~~l~~i~~PvLii~G~~D~~ 237 (446)
+. +.......+.... ......... . ..+....+.++++|+|+|+|++|.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~ 241 (295)
T PRK03592 162 VFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAI 241 (295)
T ss_pred hHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcc
Confidence 00 0000000000000 000000000 0 0011234577899999999999999
Q ss_pred CChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhhcC
Q 013268 238 IRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 238 vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~L~ 284 (446)
+++....++.....++.+++++++ ||+.. .|+++.+.|.+|+.+...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~ 291 (295)
T PRK03592 242 LTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRL 291 (295)
T ss_pred cCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHHHHhcc
Confidence 966555555544434566778776 99977 899999999999987643
No 19
>PRK10566 esterase; Provisional
Probab=99.90 E-value=7.7e-22 Score=185.93 Aligned_cols=222 Identities=19% Similarity=0.218 Sum_probs=145.3
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC----c----chHH
Q 013268 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG----W----HEKD 120 (446)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~----~----~~~~ 120 (446)
.+...++.|.+. .+++.|+||++||++++...|..++..|+++||+|+++|+||+|.+........ | ...+
T Consensus 11 ~~~~~~~~p~~~-~~~~~p~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (249)
T PRK10566 11 GIEVLHAFPAGQ-RDTPLPTVFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQ 89 (249)
T ss_pred CcceEEEcCCCC-CCCCCCEEEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHH
Confidence 344456777531 234679999999999998888889999999999999999999997632211110 1 1256
Q ss_pred HHHHHHHHHHhcC--CCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH
Q 013268 121 DLKVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY 198 (446)
Q Consensus 121 D~~~~i~~l~~~~--~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (446)
|+.++++++.++. +.++|+++||||||.+++.++..+|++++.+.+.+........... +........ .....
T Consensus 90 ~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~~ 164 (249)
T PRK10566 90 EFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMGSGYFTSLARTL---FPPLIPETA--AQQAE 164 (249)
T ss_pred HHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeCcHHHHHHHHHh---ccccccccc--ccHHH
Confidence 7788888888764 3479999999999999999999999876655433221111111000 000000000 00000
Q ss_pred HHHHHhhhhcccccccchhhhCCCC-CCcEEEEEeCCCCCCChHHHHHHHHHcCC-----CcEEEEeCC-CCCCCChhHH
Q 013268 199 MRRVIQKKAKFDIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAG-----DKNIIKFDG-DHNSSRPQFY 271 (446)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~-----~~~~~~~~g-gH~~~~~~~~ 271 (446)
......... ..+....+.++ ++|+|++||++|.++|++.++.+++.++. ..+++++++ ||... ...
T Consensus 165 ~~~~~~~~~-----~~~~~~~~~~i~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~H~~~--~~~ 237 (249)
T PRK10566 165 FNNIVAPLA-----EWEVTHQLEQLADRPLLLWHGLADDVVPAAESLRLQQALRERGLDKNLTCLWEPGVRHRIT--PEA 237 (249)
T ss_pred HHHHHHHHh-----hcChhhhhhhcCCCCEEEEEcCCCCcCCHHHHHHHHHHHHhcCCCcceEEEecCCCCCccC--HHH
Confidence 111111111 11233445565 68999999999999999999999988763 246677888 99865 356
Q ss_pred HHHHHHHHHhhc
Q 013268 272 YDSVSIFFYNVL 283 (446)
Q Consensus 272 ~~~i~~Fl~~~L 283 (446)
.+.+.+||+++|
T Consensus 238 ~~~~~~fl~~~~ 249 (249)
T PRK10566 238 LDAGVAFFRQHL 249 (249)
T ss_pred HHHHHHHHHhhC
Confidence 788999999764
No 20
>PRK10985 putative hydrolase; Provisional
Probab=99.89 E-value=3.7e-21 Score=188.50 Aligned_cols=266 Identities=14% Similarity=0.129 Sum_probs=163.3
Q ss_pred CCCCCccccccccc------cC-CCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh--HHHHH
Q 013268 16 EYNPDQYLWERDFM------LA-GRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAA 86 (446)
Q Consensus 16 ~~~~~~~~~~~~~~------~~-~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~--~~~~~ 86 (446)
+|.|..|+.+..++ +. ...++.+...+...||..+...+ .+.+ ......|+||++||++++... +..++
T Consensus 3 ~~~p~~~~~~~h~qt~~~~~~~~~~~~~~~~~~~~~~dg~~~~l~w-~~~~-~~~~~~p~vll~HG~~g~~~~~~~~~~~ 80 (324)
T PRK10985 3 EFTPMRGASNPHLQTLLPRLIRRKVLFTPYWQRLELPDGDFVDLAW-SEDP-AQARHKPRLVLFHGLEGSFNSPYAHGLL 80 (324)
T ss_pred CCCCCcCCCCCcHHHhhHHHhcCCCCCCcceeEEECCCCCEEEEec-CCCC-ccCCCCCEEEEeCCCCCCCcCHHHHHHH
Confidence 46666666666664 11 11122333446778898776553 2211 123457999999999876433 45688
Q ss_pred HHhccCCcEEEEeCCCCCCCCCCCC-cCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC-C--ccE
Q 013268 87 VILLPSNITLFTLDFSGSGLSDGDY-VSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-S--IAG 162 (446)
Q Consensus 87 ~~L~~~Gy~Vi~~D~~G~G~S~~~~-~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p-~--v~~ 162 (446)
..|.++||+|+++|+||||.+.... ........+|+..++++++++.+..+++++||||||.+++.++++++ + +++
T Consensus 81 ~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~ 160 (324)
T PRK10985 81 EAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDA 160 (324)
T ss_pred HHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccE
Confidence 8999999999999999999775432 11122337899999999998877789999999999998888887764 2 788
Q ss_pred EEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHH------------------H---------HHHH-hhhhcccc---
Q 013268 163 MVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQY------------------M---------RRVI-QKKAKFDI--- 211 (446)
Q Consensus 163 lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~---------~~~~-~~~~~~~~--- 211 (446)
+|+++++.++......+.......+..+........ + .... .....+..
T Consensus 161 ~v~i~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~ 240 (324)
T PRK10985 161 AVIVSAPLMLEACSYRMEQGFSRVYQRYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAID 240 (324)
T ss_pred EEEEcCCCCHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHH
Confidence 888888776543211111100000000000000000 0 0000 00000000
Q ss_pred --cccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC------Chh-HHHHHHHHHHHh
Q 013268 212 --MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS------RPQ-FYYDSVSIFFYN 281 (446)
Q Consensus 212 --~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~------~~~-~~~~~i~~Fl~~ 281 (446)
...+....++++++|+++|+|++|++++.+....+.+..+ +.+++++++ ||+.. .+. ..-+.+.+||+.
T Consensus 241 ~y~~~~~~~~l~~i~~P~lii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~GH~~~~~g~~~~~~~w~~~~~~~~~~~ 319 (324)
T PRK10985 241 YYRQCSALPLLNQIRKPTLIIHAKDDPFMTHEVIPKPESLPP-NVEYQLTEHGGHVGFVGGTLLKPQMWLEQRIPDWLTT 319 (324)
T ss_pred HHHHCChHHHHhCCCCCEEEEecCCCCCCChhhChHHHHhCC-CeEEEECCCCCceeeCCCCCCCCCccHHHHHHHHHHH
Confidence 0122345678899999999999999999887777655443 456677776 99854 122 445667889876
Q ss_pred hcC
Q 013268 282 VLH 284 (446)
Q Consensus 282 ~L~ 284 (446)
.+.
T Consensus 320 ~~~ 322 (324)
T PRK10985 320 YLE 322 (324)
T ss_pred hhc
Confidence 653
No 21
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.89 E-value=9.2e-22 Score=184.72 Aligned_cols=213 Identities=16% Similarity=0.186 Sum_probs=138.1
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
.+.|+||++||++++...|...+..|.+ +|+|+++|+||||.|...... .+ ..++..+.+..+.+..+..+++++||
T Consensus 11 ~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~-~~-~~~~~~~~~~~~i~~~~~~~~~l~G~ 87 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYWAPQLDVLTQ-RFHVVTYDHRGTGRSPGELPP-GY-SIAHMADDVLQLLDALNIERFHFVGH 87 (257)
T ss_pred CCCCEEEEEcCCCcchhHHHHHHHHHHh-ccEEEEEcCCCCCCCCCCCcc-cC-CHHHHHHHHHHHHHHhCCCcEEEEEe
Confidence 4578999999999999999888877765 799999999999999754321 11 12333333333333336688999999
Q ss_pred chhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHH----HHHHHHhhh-CCchh---------HHHHHHH---H-HHHHh
Q 013268 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML----ELVDVYKIR-LPKFT---------VKMAVQY---M-RRVIQ 204 (446)
Q Consensus 144 S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~----~~~~~~~~~-~~~~~---------~~~~~~~---~-~~~~~ 204 (446)
||||.+++.++..+|+ ++++|+++++........ ......... ...+. ..+.... . .....
T Consensus 88 S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (257)
T TIGR03611 88 ALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRRCFDVRIALLQHAGPEAYVHAQALFLYPADWISENAARLAADEAH 167 (257)
T ss_pred chhHHHHHHHHHHChHHhHHheeecCCCCCChhHHHHHHHHHHHHhccCcchhhhhhhhhhccccHhhccchhhhhhhhh
Confidence 9999999999999997 999999887554311100 000000000 00000 0000000 0 00000
Q ss_pred hhhc-----------ccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhH
Q 013268 205 KKAK-----------FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQF 270 (446)
Q Consensus 205 ~~~~-----------~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~ 270 (446)
.... ......+....+.++++|+++++|++|.++|++.++.+++.+++ .+++++++ ||... ++++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~~~~ 246 (257)
T TIGR03611 168 ALAHFPGKANVLRRINALEAFDVSARLDRIQHPVLLIANRDDMLVPYTQSLRLAAALPN-AQLKLLPYGGHASNVTDPET 246 (257)
T ss_pred cccccCccHHHHHHHHHHHcCCcHHHhcccCccEEEEecCcCcccCHHHHHHHHHhcCC-ceEEEECCCCCCccccCHHH
Confidence 0000 00011233355778899999999999999999999999988875 46777775 99866 7889
Q ss_pred HHHHHHHHHH
Q 013268 271 YYDSVSIFFY 280 (446)
Q Consensus 271 ~~~~i~~Fl~ 280 (446)
+.+.|.+||+
T Consensus 247 ~~~~i~~fl~ 256 (257)
T TIGR03611 247 FNRALLDFLK 256 (257)
T ss_pred HHHHHHHHhc
Confidence 9999999985
No 22
>PRK06489 hypothetical protein; Provisional
Probab=99.89 E-value=3.6e-21 Score=191.43 Aligned_cols=247 Identities=14% Similarity=0.147 Sum_probs=150.9
Q ss_pred eeEEEEEEC---CCCcEEEEEEEecCC-CCCCCCCcEEEEECCCCCChhhHH--HHHHHh-------ccCCcEEEEeCCC
Q 013268 36 KRQDLEIRN---ARGHVLQCSHYMPSP-FPEDTPLPCVVYCHGNSGCRADAN--EAAVIL-------LPSNITLFTLDFS 102 (446)
Q Consensus 36 ~~~~v~~~~---~dG~~L~~~~~~P~~-~~~~~~~p~VVllHG~g~~~~~~~--~~~~~L-------~~~Gy~Vi~~D~~ 102 (446)
.-+++.+.. .+|.++++..+.... ....+..|+|||+||++++...|. .+...| ..++|+|+++|+|
T Consensus 35 ~~~~~~~~~~~~~~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~ 114 (360)
T PRK06489 35 VARDFTFHSGETLPELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGI 114 (360)
T ss_pred eccceeccCCCCcCCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCC
Confidence 334455554 567777776542100 000011689999999999887775 444443 2468999999999
Q ss_pred CCCCCCCCCcCC----CcchHHHHH-HHHHHHHhcCCCCcEE-EEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH---
Q 013268 103 GSGLSDGDYVSL----GWHEKDDLK-VVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--- 172 (446)
Q Consensus 103 G~G~S~~~~~~~----~~~~~~D~~-~~i~~l~~~~~~~~i~-lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~--- 172 (446)
|||.|+...... .....+++. +++..+.+..++++++ |+||||||++|+.+|.++|+ |+++|++++....
T Consensus 115 GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~ 194 (360)
T PRK06489 115 GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSG 194 (360)
T ss_pred CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccH
Confidence 999997543211 012245554 3445565666778875 89999999999999999998 9999998764311
Q ss_pred HHH-HHHH-HHHHhhh-------CCch--hHHH-------------------------HHHHHHHHHhhhh-----c---
Q 013268 173 FDL-MLEL-VDVYKIR-------LPKF--TVKM-------------------------AVQYMRRVIQKKA-----K--- 208 (446)
Q Consensus 173 ~~~-~~~~-~~~~~~~-------~~~~--~~~~-------------------------~~~~~~~~~~~~~-----~--- 208 (446)
... .... ....... .... .... ....+........ .
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (360)
T PRK06489 195 RNWMWRRMLIESIRNDPAWNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLY 274 (360)
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHH
Confidence 110 1000 0000000 0000 0000 0000000000000 0
Q ss_pred -c-cccccchhhhCCCCCCcEEEEEeCCCCCCChHHH--HHHHHHcCCCcEEEEeCC-----CCCCC-ChhHHHHHHHHH
Q 013268 209 -F-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS--DLIFNAYAGDKNIIKFDG-----DHNSS-RPQFYYDSVSIF 278 (446)
Q Consensus 209 -~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~--~~l~~~l~~~~~~~~~~g-----gH~~~-~~~~~~~~i~~F 278 (446)
+ .....+....+.+|++|+|+|+|++|.++|++.+ +.+.+.+++ .+++++++ ||... +|+.+.+.|.+|
T Consensus 275 ~~~~~~~~d~~~~L~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~-a~l~~i~~a~~~~GH~~~e~P~~~~~~i~~F 353 (360)
T PRK06489 275 QWDSSRDYNPSPDLEKIKAPVLAINSADDERNPPETGVMEAALKRVKH-GRLVLIPASPETRGHGTTGSAKFWKAYLAEF 353 (360)
T ss_pred HHHHhhccChHHHHHhCCCCEEEEecCCCcccChhhHHHHHHHHhCcC-CeEEEECCCCCCCCcccccCHHHHHHHHHHH
Confidence 0 0011234456778999999999999999999875 778888875 56777775 89877 788999999999
Q ss_pred HHhhc
Q 013268 279 FYNVL 283 (446)
Q Consensus 279 l~~~L 283 (446)
|+++-
T Consensus 354 L~~~~ 358 (360)
T PRK06489 354 LAQVP 358 (360)
T ss_pred HHhcc
Confidence 98764
No 23
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.89 E-value=6.4e-22 Score=209.20 Aligned_cols=239 Identities=19% Similarity=0.232 Sum_probs=178.1
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh--HHHHHHHhccCCcEEEEeCCCCCCCCC----
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPSNITLFTLDFSGSGLSD---- 108 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~--~~~~~~~L~~~Gy~Vi~~D~~G~G~S~---- 108 (446)
.+.+.+.++..||.++.++++.|.+....++.|+||++||++..... +....+.|+.+||.|+.+|+||.+.-.
T Consensus 363 ~~~e~~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~ 442 (620)
T COG1506 363 AEPEPVTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFA 442 (620)
T ss_pred CCceEEEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHH
Confidence 45688999999999999999999876555667999999999754433 566788999999999999999875532
Q ss_pred -CCCcCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhh
Q 013268 109 -GDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKI 185 (446)
Q Consensus 109 -~~~~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~ 185 (446)
......+..+.+|+.++++++.+...+ ++++|+|+|+||++++.++...|.+++.+...+..+...........+..
T Consensus 443 ~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~~f~a~~~~~~~~~~~~~~~~~~~~~~~ 522 (620)
T COG1506 443 DAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIGITGGSYGGYMTLLAATKTPRFKAAVAVAGGVDWLLYFGESTEGLRF 522 (620)
T ss_pred HhhhhccCCccHHHHHHHHHHHHhCCCcChHHeEEeccChHHHHHHHHHhcCchhheEEeccCcchhhhhccccchhhcC
Confidence 222234445689999999988777655 59999999999999999999999988888777765543322211111000
Q ss_pred hCCchhHHHHHHHHHHHHhhh--hcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeC
Q 013268 186 RLPKFTVKMAVQYMRRVIQKK--AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFD 260 (446)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~ 260 (446)
.. ....... ........++...+.++++|+|+|||+.|..||.+++..++++++ .+.++++++
T Consensus 523 ~~------------~~~~~~~~~~~~~~~~~sp~~~~~~i~~P~LliHG~~D~~v~~~q~~~~~~aL~~~g~~~~~~~~p 590 (620)
T COG1506 523 DP------------EENGGGPPEDREKYEDRSPIFYADNIKTPLLLIHGEEDDRVPIEQAEQLVDALKRKGKPVELVVFP 590 (620)
T ss_pred CH------------HHhCCCcccChHHHHhcChhhhhcccCCCEEEEeecCCccCChHHHHHHHHHHHHcCceEEEEEeC
Confidence 00 0000000 011122346778889999999999999999999999999998876 467889999
Q ss_pred C-CCCCCCh---hHHHHHHHHHHHhhcCC
Q 013268 261 G-DHNSSRP---QFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 261 g-gH~~~~~---~~~~~~i~~Fl~~~L~~ 285 (446)
+ +|.+..+ ....+.+.+||+++++.
T Consensus 591 ~e~H~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (620)
T COG1506 591 DEGHGFSRPENRVKVLKEILDWFKRHLKQ 619 (620)
T ss_pred CCCcCCCCchhHHHHHHHHHHHHHHHhcC
Confidence 8 9998743 46778899999999864
No 24
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.89 E-value=1.2e-21 Score=184.86 Aligned_cols=220 Identities=18% Similarity=0.240 Sum_probs=142.4
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-HHHHHHHHHH
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSY 128 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~-~~D~~~~i~~ 128 (446)
+.+..+.|. +...+|+||++||++++...|..++..|.+ +|+|+++|+||||.|..... ..+.. ++|+.+++++
T Consensus 3 ~~~~~~~~~---~~~~~~~iv~lhG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~s~~~~~-~~~~~~~~d~~~~l~~ 77 (255)
T PRK10673 3 LNIRAQTAQ---NPHNNSPIVLVHGLFGSLDNLGVLARDLVN-DHDIIQVDMRNHGLSPRDPV-MNYPAMAQDLLDTLDA 77 (255)
T ss_pred ceeeeccCC---CCCCCCCEEEECCCCCchhHHHHHHHHHhh-CCeEEEECCCCCCCCCCCCC-CCHHHHHHHHHHHHHH
Confidence 344444443 445679999999999999999999888865 69999999999999985432 22221 4555555554
Q ss_pred HHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH------HHHHHHHHHHhhhCCchhHHHHHHHHHH
Q 013268 129 LRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF------DLMLELVDVYKIRLPKFTVKMAVQYMRR 201 (446)
Q Consensus 129 l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (446)
+ +.++++++||||||.+++.+|..+|+ |+++|++++..... .....+........... ......+..
T Consensus 78 l----~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 151 (255)
T PRK10673 78 L----QIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEAGATTR--QQAAAIMRQ 151 (255)
T ss_pred c----CCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhcccccH--HHHHHHHHH
Confidence 4 66789999999999999999999998 99999975322110 01000000000000000 000000000
Q ss_pred ---------HHhhhh---c--cc-------ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeC
Q 013268 202 ---------VIQKKA---K--FD-------IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD 260 (446)
Q Consensus 202 ---------~~~~~~---~--~~-------~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ 260 (446)
...... . +. .........++++++|+|+|+|++|..++.+..+.+.+.+++ .++++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~G~~D~~~~~~~~~~~~~~~~~-~~~~~~~ 230 (255)
T PRK10673 152 HLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAWPHPALFIRGGNSPYVTEAYRDDLLAQFPQ-ARAHVIA 230 (255)
T ss_pred hcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHhCCcccCCCCCCeEEEECCCCCCCCHHHHHHHHHhCCC-cEEEEeC
Confidence 000000 0 00 000011123567889999999999999999999999888875 5677777
Q ss_pred C-CCCCC--ChhHHHHHHHHHHHh
Q 013268 261 G-DHNSS--RPQFYYDSVSIFFYN 281 (446)
Q Consensus 261 g-gH~~~--~~~~~~~~i~~Fl~~ 281 (446)
+ ||+.. .|+.+.+.|.+||.+
T Consensus 231 ~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 231 GAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred CCCCeeeccCHHHHHHHHHHHHhc
Confidence 6 99866 788899999999975
No 25
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.88 E-value=6.8e-21 Score=181.66 Aligned_cols=229 Identities=16% Similarity=0.110 Sum_probs=148.2
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHH
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D 121 (446)
+...+|.++.+.... ....|+||++||++++...|..++..|++ +|+|+++|+||||.|....... ...++
T Consensus 10 ~~~~~~~~~~~~~~g------~~~~~~vv~~hG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~~~--~~~~~ 80 (278)
T TIGR03056 10 RVTVGPFHWHVQDMG------PTAGPLLLLLHGTGASTHSWRDLMPPLAR-SFRVVAPDLPGHGFTRAPFRFR--FTLPS 80 (278)
T ss_pred eeeECCEEEEEEecC------CCCCCeEEEEcCCCCCHHHHHHHHHHHhh-CcEEEeecCCCCCCCCCccccC--CCHHH
Confidence 334578887766542 22458999999999999999999988876 6999999999999998654311 12444
Q ss_pred HHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH--------HHHHHHHH------Hhhh
Q 013268 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--------LMLELVDV------YKIR 186 (446)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~--------~~~~~~~~------~~~~ 186 (446)
+.+.+..+.+..+.++++|+||||||.+++.+|..+|+ ++++|++++...... ........ ....
T Consensus 81 ~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (278)
T TIGR03056 81 MAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLACNPFTPPMMSR 160 (278)
T ss_pred HHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhhcccchHHHHh
Confidence 44444444455566889999999999999999999998 999998876432110 00000000 0000
Q ss_pred C---CchhHHH-----------HHHHHHHHHhhhh-------cc-cccccchhhhCCCCCCcEEEEEeCCCCCCChHHHH
Q 013268 187 L---PKFTVKM-----------AVQYMRRVIQKKA-------KF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSD 244 (446)
Q Consensus 187 ~---~~~~~~~-----------~~~~~~~~~~~~~-------~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~ 244 (446)
. ....... ............. .. ..........++++++|+++++|++|.++|.+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~P~lii~g~~D~~vp~~~~~ 240 (278)
T TIGR03056 161 GAADQQRVERLIRDTGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITIPLHLIAGEEDKAVPPDESK 240 (278)
T ss_pred hcccCcchhHHhhccccccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCCCEEEEEeCCCcccCHHHHH
Confidence 0 0000000 0000000000000 00 00000122456788999999999999999999999
Q ss_pred HHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHH
Q 013268 245 LIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 245 ~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~ 280 (446)
.+.+.+++ .+++++++ ||+.. .++++.+.|.+|++
T Consensus 241 ~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~f~~ 278 (278)
T TIGR03056 241 RAATRVPT-ATLHVVPGGGHLVHEEQADGVVGLILQAAE 278 (278)
T ss_pred HHHHhccC-CeEEEECCCCCcccccCHHHHHHHHHHHhC
Confidence 98888764 56788887 99976 78899999999973
No 26
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.88 E-value=1.1e-20 Score=191.61 Aligned_cols=235 Identities=14% Similarity=0.123 Sum_probs=151.3
Q ss_pred EEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHH-HHHHhc---cCCcEEEEeCCCCCCCCCCCCcCCCc
Q 013268 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-AAVILL---PSNITLFTLDFSGSGLSDGDYVSLGW 116 (446)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~-~~~~L~---~~Gy~Vi~~D~~G~G~S~~~~~~~~~ 116 (446)
.+.+..|.+|++....|. .+..+|+|||+||++++...|.. +...|. +++|+|+++|+||||.|+.... ..
T Consensus 179 ~~~~~~~~~l~~~~~gp~---~~~~k~~VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~-~~- 253 (481)
T PLN03087 179 SWLSSSNESLFVHVQQPK---DNKAKEDVLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPAD-SL- 253 (481)
T ss_pred eeEeeCCeEEEEEEecCC---CCCCCCeEEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCC-Cc-
Confidence 455556688998888775 33456899999999999988875 335554 3689999999999999975432 11
Q ss_pred chHHHHHHHH-HHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH----HHHHHHHHHh-hh-CC
Q 013268 117 HEKDDLKVVV-SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LMLELVDVYK-IR-LP 188 (446)
Q Consensus 117 ~~~~D~~~~i-~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~----~~~~~~~~~~-~~-~~ 188 (446)
...++..+.+ ..+.+..+.++++++||||||.+++.+|.++|+ |+++|++++...... .......... .. .+
T Consensus 254 ytl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (481)
T PLN03087 254 YTLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWP 333 (481)
T ss_pred CCHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCC
Confidence 2244444444 345555678999999999999999999999998 999999986542110 0000000000 00 00
Q ss_pred c-----hhHHH-----------------HHHHHHHHHhhh-----h-----------cc-c----c------cccchhhh
Q 013268 189 K-----FTVKM-----------------AVQYMRRVIQKK-----A-----------KF-D----I------MDLNCLKL 219 (446)
Q Consensus 189 ~-----~~~~~-----------------~~~~~~~~~~~~-----~-----------~~-~----~------~~~~~~~~ 219 (446)
. ....+ ....+....... . .+ . . .+......
T Consensus 334 ~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l 413 (481)
T PLN03087 334 PIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHV 413 (481)
T ss_pred ccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHH
Confidence 0 00000 000000000000 0 00 0 0 00001112
Q ss_pred CCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC---ChhHHHHHHHHHHHh
Q 013268 220 APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYN 281 (446)
Q Consensus 220 l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~---~~~~~~~~i~~Fl~~ 281 (446)
..+|++|+|+++|++|.++|++.++.+.+.+++ .+++++++ ||..+ +|+.+++.|.+|...
T Consensus 414 ~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~-a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 414 RDQLKCDVAIFHGGDDELIPVECSYAVKAKVPR-ARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred HHhCCCCEEEEEECCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 236899999999999999999999999999875 67888887 99955 688999999999854
No 27
>PLN02965 Probable pheophorbidase
Probab=99.88 E-value=3.3e-21 Score=182.44 Aligned_cols=212 Identities=14% Similarity=0.165 Sum_probs=136.9
Q ss_pred EEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEechh
Q 013268 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMG 146 (446)
Q Consensus 68 ~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~G 146 (446)
.|||+||++.+...|..++..|.+.||+|+++|+||||.|+..... . ...+++.+.+..+.+..+. .+++++|||||
T Consensus 5 ~vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~-~-~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmG 82 (255)
T PLN02965 5 HFVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNT-V-SSSDQYNRPLFALLSDLPPDHKVILVGHSIG 82 (255)
T ss_pred EEEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccc-c-CCHHHHHHHHHHHHHhcCCCCCEEEEecCcc
Confidence 5999999999999999999999888999999999999999754321 1 1133433333333333355 59999999999
Q ss_pred HHHHHHHHHhCCC-ccEEEEeCCcc---CH--HHHHHHHHH----HHhh---hCCchh-------HHHHHHHH-HH----
Q 013268 147 AVTSLLYGAEDPS-IAGMVLDSAFS---DL--FDLMLELVD----VYKI---RLPKFT-------VKMAVQYM-RR---- 201 (446)
Q Consensus 147 G~ial~~a~~~p~-v~~lVl~sp~~---~~--~~~~~~~~~----~~~~---~~~~~~-------~~~~~~~~-~~---- 201 (446)
|.+++.++..+|+ |+++|++++.. .. ......... .+.. ...... ........ ..
T Consensus 83 G~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (255)
T PLN02965 83 GGSVTEALCKFTDKISMAIYVAAAMVKPGSIISPRLKNVMEGTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLE 162 (255)
T ss_pred hHHHHHHHHhCchheeEEEEEccccCCCCCCccHHHHhhhhccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHH
Confidence 9999999999998 99999987652 11 111111000 0000 000000 00000000 00
Q ss_pred -HHhhhh---c--c-ccccc-chhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhH
Q 013268 202 -VIQKKA---K--F-DIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQF 270 (446)
Q Consensus 202 -~~~~~~---~--~-~~~~~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~ 270 (446)
...... . . ..... +....+.++++|+++++|++|..+|++.++.+.+.+++. +++++++ ||+.. +|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~D~~~~~~~~~~~~~~~~~a-~~~~i~~~GH~~~~e~p~~ 241 (255)
T PLN02965 163 DYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAKDNLFDPVRQDVMVENWPPA-QTYVLEDSDHSAFFSVPTT 241 (255)
T ss_pred HHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCCCCCCCHHHHHHHHHhCCcc-eEEEecCCCCchhhcCHHH
Confidence 000000 0 0 00000 111234568999999999999999999999999998864 5777765 99977 8999
Q ss_pred HHHHHHHHHHhh
Q 013268 271 YYDSVSIFFYNV 282 (446)
Q Consensus 271 ~~~~i~~Fl~~~ 282 (446)
+.+.|.+|++..
T Consensus 242 v~~~l~~~~~~~ 253 (255)
T PLN02965 242 LFQYLLQAVSSL 253 (255)
T ss_pred HHHHHHHHHHHh
Confidence 999999998754
No 28
>PLN02578 hydrolase
Probab=99.88 E-value=9.7e-21 Score=187.85 Aligned_cols=223 Identities=17% Similarity=0.194 Sum_probs=144.6
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch-HHHH
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE-KDDL 122 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~-~~D~ 122 (446)
+.+|..+.+... ++.|+||++||++++...|..++..|++ +|+|+++|+||||.|++....+.... .+++
T Consensus 72 ~~~~~~i~Y~~~--------g~g~~vvliHG~~~~~~~w~~~~~~l~~-~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l 142 (354)
T PLN02578 72 TWRGHKIHYVVQ--------GEGLPIVLIHGFGASAFHWRYNIPELAK-KYKVYALDLLGFGWSDKALIEYDAMVWRDQV 142 (354)
T ss_pred EECCEEEEEEEc--------CCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCcccccCHHHHHHHH
Confidence 345767775432 2447799999999999999988888875 69999999999999987654333211 2344
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHH--------------HHHH--------HH
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--------------DLML--------EL 179 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~--------------~~~~--------~~ 179 (446)
.+.++.+ ..++++++||||||.+++.+|.++|+ ++++|++++..... .... ..
T Consensus 143 ~~~i~~~----~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 218 (354)
T PLN02578 143 ADFVKEV----VKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVLTRFVVKPLKEW 218 (354)
T ss_pred HHHHHHh----ccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchhhHHHhHHHHHH
Confidence 4444433 45789999999999999999999998 99999986532110 0000 00
Q ss_pred HHHHhhh---CCchhHHHHHH--------------HHHHHH--------------hhhhcc--cccccchhhhCCCCCCc
Q 013268 180 VDVYKIR---LPKFTVKMAVQ--------------YMRRVI--------------QKKAKF--DIMDLNCLKLAPKTFIP 226 (446)
Q Consensus 180 ~~~~~~~---~~~~~~~~~~~--------------~~~~~~--------------~~~~~~--~~~~~~~~~~l~~i~~P 226 (446)
....... ........... ++.... .....+ .....+....++++++|
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 298 (354)
T PLN02578 219 FQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYTLDSLLSKLSCP 298 (354)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCCHHHHhhcCCCC
Confidence 0000000 00000000000 000000 000000 00112234556789999
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC--ChhHHHHHHHHHHH
Q 013268 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~--~~~~~~~~i~~Fl~ 280 (446)
+++|+|++|.+++.+.++.+.+.+++ .+++++++||+.+ .|+++.+.|.+|+.
T Consensus 299 vLiI~G~~D~~v~~~~~~~l~~~~p~-a~l~~i~~GH~~~~e~p~~~~~~I~~fl~ 353 (354)
T PLN02578 299 LLLLWGDLDPWVGPAKAEKIKAFYPD-TTLVNLQAGHCPHDEVPEQVNKALLEWLS 353 (354)
T ss_pred EEEEEeCCCCCCCHHHHHHHHHhCCC-CEEEEeCCCCCccccCHHHHHHHHHHHHh
Confidence 99999999999999999999988875 4677777899977 79999999999985
No 29
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.88 E-value=1.3e-20 Score=187.29 Aligned_cols=230 Identities=16% Similarity=0.244 Sum_probs=140.5
Q ss_pred CCc-EEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH
Q 013268 46 RGH-VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (446)
Q Consensus 46 dG~-~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~ 124 (446)
+|. +++|....+.. .....|+|||+||++++...|..++..|.+ +|+|+++|+||||.|+.... ..+ ..++..+
T Consensus 69 ~g~~~i~Y~~~G~g~--~~~~gp~lvllHG~~~~~~~w~~~~~~L~~-~~~via~Dl~G~G~S~~~~~-~~~-~~~~~a~ 143 (360)
T PLN02679 69 KGEYSINYLVKGSPE--VTSSGPPVLLVHGFGASIPHWRRNIGVLAK-NYTVYAIDLLGFGASDKPPG-FSY-TMETWAE 143 (360)
T ss_pred CCceeEEEEEecCcc--cCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCCC-ccc-cHHHHHH
Confidence 354 77766542210 011358999999999999999999988876 79999999999999976432 111 1233333
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHHHh-CCC-ccEEEEeCCccCHH------HHHHH-------HHHHHhhhCCc
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE-DPS-IAGMVLDSAFSDLF------DLMLE-------LVDVYKIRLPK 189 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~-~p~-v~~lVl~sp~~~~~------~~~~~-------~~~~~~~~~~~ 189 (446)
.+..+.+..+.++++|+||||||.+++.++.. +|+ |+++|++++..... ..... ..... ...+.
T Consensus 144 ~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 222 (360)
T PLN02679 144 LILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPLLWLIDFL-LKQRG 222 (360)
T ss_pred HHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcchHHHHHHH-hhchh
Confidence 33222233367899999999999999998874 677 99999998653210 00000 00000 00000
Q ss_pred hh---------HHHHHHHHHH--------------HHhhh-------hc----cc-ccccchhhhCCCCCCcEEEEEeCC
Q 013268 190 FT---------VKMAVQYMRR--------------VIQKK-------AK----FD-IMDLNCLKLAPKTFIPALFGHASE 234 (446)
Q Consensus 190 ~~---------~~~~~~~~~~--------------~~~~~-------~~----~~-~~~~~~~~~l~~i~~PvLii~G~~ 234 (446)
.. .......+.. ..... .. .. ....+....+.++++|+|+++|++
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PtLii~G~~ 302 (360)
T PLN02679 223 IASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPIKLIPRISLPILVLWGDQ 302 (360)
T ss_pred hHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHHHHhhhcCCCEEEEEeCC
Confidence 00 0000000000 00000 00 00 001122345678999999999999
Q ss_pred CCCCChHHH-----HHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 235 DKFIRARHS-----DLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 235 D~~vp~~~~-----~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
|.++|++.. ..+.+.++ +.+++++++ ||+.. .|+++.+.|.+||.+.
T Consensus 303 D~~~p~~~~~~~~~~~l~~~ip-~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL~~~ 357 (360)
T PLN02679 303 DPFTPLDGPVGKYFSSLPSQLP-NVTLYVLEGVGHCPHDDRPDLVHEKLLPWLAQL 357 (360)
T ss_pred CCCcCchhhHHHHHHhhhccCC-ceEEEEcCCCCCCccccCHHHHHHHHHHHHHhc
Confidence 999998742 23444455 467888887 99977 7999999999999763
No 30
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.87 E-value=9e-21 Score=179.40 Aligned_cols=205 Identities=14% Similarity=0.094 Sum_probs=134.6
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEech
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~ 145 (446)
.|+|||+||++++...|..++..|.+ .|+|+++|+||||.|.... .. ..+++.+ .+.+. ..++++++||||
T Consensus 13 ~~~ivllHG~~~~~~~w~~~~~~L~~-~~~vi~~Dl~G~G~S~~~~-~~---~~~~~~~---~l~~~-~~~~~~lvGhS~ 83 (256)
T PRK10349 13 NVHLVLLHGWGLNAEVWRCIDEELSS-HFTLHLVDLPGFGRSRGFG-AL---SLADMAE---AVLQQ-APDKAIWLGWSL 83 (256)
T ss_pred CCeEEEECCCCCChhHHHHHHHHHhc-CCEEEEecCCCCCCCCCCC-CC---CHHHHHH---HHHhc-CCCCeEEEEECH
Confidence 35799999999999999999999976 5999999999999997532 11 2333333 33332 458899999999
Q ss_pred hHHHHHHHHHhCCC-ccEEEEeCCccCHH----------HHHHHHHHHHhh----hC---------CchhHH-HHHHHHH
Q 013268 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF----------DLMLELVDVYKI----RL---------PKFTVK-MAVQYMR 200 (446)
Q Consensus 146 GG~ial~~a~~~p~-v~~lVl~sp~~~~~----------~~~~~~~~~~~~----~~---------~~~~~~-~~~~~~~ 200 (446)
||.+++.+|.++|+ |+++|++++..... .....+...... .. ...... .......
T Consensus 84 Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (256)
T PRK10349 84 GGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQQQLSDDFQRTVERFLALQTMGTETARQDARALKK 163 (256)
T ss_pred HHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHHHHHHhchHHHHHHHHHHHHccCchHHHHHHHHHH
Confidence 99999999999998 99999987642210 001011000000 00 000000 0000000
Q ss_pred HHHhhh--------hcc-cccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--Ch
Q 013268 201 RVIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (446)
Q Consensus 201 ~~~~~~--------~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~ 268 (446)
...... ... .....+....+.++++|+|+++|++|.++|.+.++.+.+.+++ .+++++++ ||+.+ +|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~i~~-~~~~~i~~~gH~~~~e~p 242 (256)
T PRK10349 164 TVLALPMPEVDVLNGGLEILKTVDLRQPLQNVSMPFLRLYGYLDGLVPRKVVPMLDKLWPH-SESYIFAKAAHAPFISHP 242 (256)
T ss_pred HhhccCCCcHHHHHHHHHHHHhCccHHHHhhcCCCeEEEecCCCccCCHHHHHHHHHhCCC-CeEEEeCCCCCCccccCH
Confidence 000000 000 0012234456778999999999999999999998888888874 56788887 99977 78
Q ss_pred hHHHHHHHHHHH
Q 013268 269 QFYYDSVSIFFY 280 (446)
Q Consensus 269 ~~~~~~i~~Fl~ 280 (446)
+.+.+.+.+|-.
T Consensus 243 ~~f~~~l~~~~~ 254 (256)
T PRK10349 243 AEFCHLLVALKQ 254 (256)
T ss_pred HHHHHHHHHHhc
Confidence 899999988754
No 31
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.87 E-value=6.8e-21 Score=187.00 Aligned_cols=234 Identities=17% Similarity=0.188 Sum_probs=153.3
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh-hH-------------------------HHHHHHhccCCcE
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA-DA-------------------------NEAAVILLPSNIT 95 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~-~~-------------------------~~~~~~L~~~Gy~ 95 (446)
+.+.||..|+++.|.|. .++.+|+++||++++.. .+ ..+++.|.++||.
T Consensus 2 ~~~~~g~~l~~~~~~~~-----~~kg~v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~ 76 (332)
T TIGR01607 2 FRNKDGLLLKTYSWIVK-----NAIGIIVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYS 76 (332)
T ss_pred ccCCCCCeEEEeeeecc-----CCeEEEEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCc
Confidence 56789999999999874 46789999999998875 11 3578999999999
Q ss_pred EEEeCCCCCCCCCCCCcCC----Ccch-HHHHHHHHHHHHh-------------------cCC-CCcEEEEEechhHHHH
Q 013268 96 LFTLDFSGSGLSDGDYVSL----GWHE-KDDLKVVVSYLRG-------------------NKQ-TSRIGLWGRSMGAVTS 150 (446)
Q Consensus 96 Vi~~D~~G~G~S~~~~~~~----~~~~-~~D~~~~i~~l~~-------------------~~~-~~~i~lvG~S~GG~ia 150 (446)
|+++|+||||.|.+..... ++.. ++|+..+++.+++ ... ..+++|+||||||.++
T Consensus 77 V~~~D~rGHG~S~~~~~~~g~~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~ 156 (332)
T TIGR01607 77 VYGLDLQGHGESDGLQNLRGHINCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIA 156 (332)
T ss_pred EEEecccccCCCccccccccchhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHH
Confidence 9999999999998642211 2322 5777778877754 122 3589999999999999
Q ss_pred HHHHHhCC---------CccEEEEeCCccCH-----------HHHHHHHHHHHhhhCCchhHHH---H---HHHHHHHHh
Q 013268 151 LLYGAEDP---------SIAGMVLDSAFSDL-----------FDLMLELVDVYKIRLPKFTVKM---A---VQYMRRVIQ 204 (446)
Q Consensus 151 l~~a~~~p---------~v~~lVl~sp~~~~-----------~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~ 204 (446)
+.++...+ .++|+|+.+|...+ ......+........|.+.... . .........
T Consensus 157 ~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 236 (332)
T TIGR01607 157 LRLLELLGKSNENNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIKF 236 (332)
T ss_pred HHHHHHhccccccccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHhc
Confidence 99886542 38899988876422 1111111111111222221100 0 000000000
Q ss_pred hhhccc----------cccc--chhhhCCCC--CCcEEEEEeCCCCCCChHHHHHHHHHcC-CCcEEEEeCC-CCCCC--
Q 013268 205 KKAKFD----------IMDL--NCLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS-- 266 (446)
Q Consensus 205 ~~~~~~----------~~~~--~~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~~~~~~g-gH~~~-- 266 (446)
+...+. +... .....+.++ ++|+|+++|++|.+++++.++.+++.+. .+++++++++ +|...
T Consensus 237 Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E 316 (332)
T TIGR01607 237 DKFRYDGGITFNLASELIKATDTLDCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIE 316 (332)
T ss_pred CccccCCcccHHHHHHHHHHHHHHHhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccC
Confidence 000000 0000 011233445 6899999999999999999999988765 4678889998 89876
Q ss_pred -ChhHHHHHHHHHHH
Q 013268 267 -RPQFYYDSVSIFFY 280 (446)
Q Consensus 267 -~~~~~~~~i~~Fl~ 280 (446)
..+++.+.|.+||.
T Consensus 317 ~~~~~v~~~i~~wL~ 331 (332)
T TIGR01607 317 PGNEEVLKKIIEWIS 331 (332)
T ss_pred CCHHHHHHHHHHHhh
Confidence 35788899999985
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.87 E-value=6.3e-20 Score=174.90 Aligned_cols=229 Identities=16% Similarity=0.210 Sum_probs=141.6
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHH
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~-~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~ 122 (446)
+.+|..+.+..+.+ .+..|+||++||++++...| ..+...+.+.||+|+++|+||+|.|............+++
T Consensus 8 ~~~~~~~~~~~~~~-----~~~~~~vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~ 82 (288)
T TIGR01250 8 TVDGGYHLFTKTGG-----EGEKIKLLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYF 82 (288)
T ss_pred cCCCCeEEEEeccC-----CCCCCeEEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHH
Confidence 35565665544322 23468899999987665544 4455555555999999999999999854322211224555
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCc------------
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPK------------ 189 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~------------ 189 (446)
.+.+..+.+..+..+++++||||||.+++.+|..+|+ ++++|+.++............... ..++.
T Consensus 83 ~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 161 (288)
T TIGR01250 83 VDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKELNRLR-KELPPEVRAAIKRCEAS 161 (288)
T ss_pred HHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHHHHHHH-hhcChhHHHHHHHHHhc
Confidence 5555555555577889999999999999999999998 999999887554322111000000 00000
Q ss_pred --hhHHHHHHHHHHHH--------------hhh------h---------cc----cccccchhhhCCCCCCcEEEEEeCC
Q 013268 190 --FTVKMAVQYMRRVI--------------QKK------A---------KF----DIMDLNCLKLAPKTFIPALFGHASE 234 (446)
Q Consensus 190 --~~~~~~~~~~~~~~--------------~~~------~---------~~----~~~~~~~~~~l~~i~~PvLii~G~~ 234 (446)
+............. ... . .+ .....+....+.++++|+++++|++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 241 (288)
T TIGR01250 162 GDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSEIKVPTLLTVGEF 241 (288)
T ss_pred cCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhccCCCEEEEecCC
Confidence 00000000000000 000 0 00 0011123445678999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHH
Q 013268 235 DKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~ 280 (446)
|.+ +++.++.+.+.+++ .+++++++ ||+.. +|+++.+.|.+|++
T Consensus 242 D~~-~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~ 288 (288)
T TIGR01250 242 DTM-TPEAAREMQELIAG-SRLVVFPDGSHMTMIEDPEVYFKLLSDFIR 288 (288)
T ss_pred Ccc-CHHHHHHHHHhccC-CeEEEeCCCCCCcccCCHHHHHHHHHHHhC
Confidence 985 66778888887764 46777876 99866 78899999999873
No 33
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.87 E-value=1.8e-20 Score=174.63 Aligned_cols=211 Identities=17% Similarity=0.182 Sum_probs=137.7
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEec
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 144 (446)
.+|+||++||++.+...|..++..|. +||+|+++|+||+|.|........ .+++.+.+..+.+..+.++++++|||
T Consensus 12 ~~~~li~~hg~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~~~~---~~~~~~~~~~~i~~~~~~~v~liG~S 87 (251)
T TIGR02427 12 GAPVLVFINSLGTDLRMWDPVLPALT-PDFRVLRYDKRGHGLSDAPEGPYS---IEDLADDVLALLDHLGIERAVFCGLS 87 (251)
T ss_pred CCCeEEEEcCcccchhhHHHHHHHhh-cccEEEEecCCCCCCCCCCCCCCC---HHHHHHHHHHHHHHhCCCceEEEEeC
Confidence 57899999999999999988888886 589999999999999975433222 34444444444444466889999999
Q ss_pred hhHHHHHHHHHhCCC-ccEEEEeCCccCHHH--HHHHHH------------HH-Hhhh-CCch---hHHHHHHHHHHHHh
Q 013268 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD--LMLELV------------DV-YKIR-LPKF---TVKMAVQYMRRVIQ 204 (446)
Q Consensus 145 ~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~--~~~~~~------------~~-~~~~-~~~~---~~~~~~~~~~~~~~ 204 (446)
|||++++.+|.++|+ ++++|++++...... ...... .. .... ...+ .......+......
T Consensus 88 ~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (251)
T TIGR02427 88 LGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARIAAVRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVR 167 (251)
T ss_pred chHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHHhhhhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHh
Confidence 999999999999987 999998876432110 000000 00 0000 0000 00000000000000
Q ss_pred hh------hcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHH
Q 013268 205 KK------AKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSV 275 (446)
Q Consensus 205 ~~------~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i 275 (446)
.. ........+....+.++++|+++++|++|.++|.+..+.+.+.+++ .+++++++ ||... .++.+.+.+
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~g~~D~~~~~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~~p~~~~~~i 246 (251)
T TIGR02427 168 QPPDGYAGCCAAIRDADFRDRLGAIAVPTLCIAGDQDGSTPPELVREIADLVPG-ARFAEIRGAGHIPCVEQPEAFNAAL 246 (251)
T ss_pred cCHHHHHHHHHHHhcccHHHHhhhcCCCeEEEEeccCCcCChHHHHHHHHhCCC-ceEEEECCCCCcccccChHHHHHHH
Confidence 00 0000112233455678899999999999999999999988888774 56777875 99866 788888888
Q ss_pred HHHHH
Q 013268 276 SIFFY 280 (446)
Q Consensus 276 ~~Fl~ 280 (446)
.+|++
T Consensus 247 ~~fl~ 251 (251)
T TIGR02427 247 RDFLR 251 (251)
T ss_pred HHHhC
Confidence 88873
No 34
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.87 E-value=4.3e-20 Score=177.88 Aligned_cols=223 Identities=16% Similarity=0.193 Sum_probs=141.7
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV 124 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~ 124 (446)
.+|.++++... +..|+|||+||++.+...|..++..|.+ +|+|+++|+||||.|+.... .. ...++..+
T Consensus 21 ~~~~~i~y~~~--------G~~~~iv~lHG~~~~~~~~~~~~~~l~~-~~~vi~~D~~G~G~S~~~~~-~~-~~~~~~~~ 89 (286)
T PRK03204 21 SSRGRIHYIDE--------GTGPPILLCHGNPTWSFLYRDIIVALRD-RFRCVAPDYLGFGLSERPSG-FG-YQIDEHAR 89 (286)
T ss_pred cCCcEEEEEEC--------CCCCEEEEECCCCccHHHHHHHHHHHhC-CcEEEEECCCCCCCCCCCCc-cc-cCHHHHHH
Confidence 36777775532 2458999999999888889888888865 69999999999999975432 11 22567777
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH----HH-HHHHHHH------------HH-hh
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL----FD-LMLELVD------------VY-KI 185 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~----~~-~~~~~~~------------~~-~~ 185 (446)
.+..+.+..+.++++++||||||.+++.++..+|+ |+++|++++.... .. ....... .. ..
T Consensus 90 ~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (286)
T PRK03204 90 VIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVER 169 (286)
T ss_pred HHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHH
Confidence 77777777678899999999999999999999998 9999987764311 00 0000000 00 00
Q ss_pred hCC-----chhHHHHHHHH---------HHHHhhhhcccccc---cchhhhCC--CCCCcEEEEEeCCCCCCChH-HHHH
Q 013268 186 RLP-----KFTVKMAVQYM---------RRVIQKKAKFDIMD---LNCLKLAP--KTFIPALFGHASEDKFIRAR-HSDL 245 (446)
Q Consensus 186 ~~~-----~~~~~~~~~~~---------~~~~~~~~~~~~~~---~~~~~~l~--~i~~PvLii~G~~D~~vp~~-~~~~ 245 (446)
..+ .........+. .........+.... ......+. .+++|+|+|+|++|.++++. ..+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~ 249 (286)
T PRK03204 170 LIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPR 249 (286)
T ss_pred hccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHH
Confidence 000 00000000000 00000000000000 00001111 12799999999999998665 5677
Q ss_pred HHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHH
Q 013268 246 IFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFF 279 (446)
Q Consensus 246 l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl 279 (446)
+.+.+++ .+++++++ ||+.. .|+++.+.|.+||
T Consensus 250 ~~~~ip~-~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 250 LRATFPD-HVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred HHHhcCC-CeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 7788875 56778876 99977 7899999999987
No 35
>PRK07581 hypothetical protein; Validated
Probab=99.87 E-value=1.7e-20 Score=185.08 Aligned_cols=235 Identities=13% Similarity=0.087 Sum_probs=148.5
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHH---HHhccCCcEEEEeCCCCCCCCCCCCcC---CCc---
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---VILLPSNITLFTLDFSGSGLSDGDYVS---LGW--- 116 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~---~~L~~~Gy~Vi~~D~~G~G~S~~~~~~---~~~--- 116 (446)
+|.+|++..+.+. .....|+||++||++++...|..++ ..|...+|+||++|+||||.|...... ++.
T Consensus 24 ~~~~l~y~~~G~~---~~~~~~~vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~ 100 (339)
T PRK07581 24 PDARLAYKTYGTL---NAAKDNAILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARF 100 (339)
T ss_pred CCceEEEEecCcc---CCCCCCEEEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCC
Confidence 5677776665321 1134577888888887766655443 356666899999999999999754321 111
Q ss_pred ---chHHHHHHHHHHHHhcCCCCc-EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH----HHHHHH------
Q 013268 117 ---HEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL----MLELVD------ 181 (446)
Q Consensus 117 ---~~~~D~~~~i~~l~~~~~~~~-i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~----~~~~~~------ 181 (446)
...+|+.+....+.+.+++++ ++|+||||||++|+.+|.++|+ |+++|++++....... ......
T Consensus 101 ~~~~~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~~~~~~l~~~~ 180 (339)
T PRK07581 101 PHVTIYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLEGLKAALTADP 180 (339)
T ss_pred CceeHHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHHHHHHHHHhCC
Confidence 124666665556666668888 5799999999999999999999 9999998654421110 000000
Q ss_pred --------------------HHh---------h-h-CCchh----HHHHHHHHHHHHh--h----------hhccccc--
Q 013268 182 --------------------VYK---------I-R-LPKFT----VKMAVQYMRRVIQ--K----------KAKFDIM-- 212 (446)
Q Consensus 182 --------------------~~~---------~-~-~~~~~----~~~~~~~~~~~~~--~----------~~~~~~~-- 212 (446)
... . . ..... ............. . .......
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 260 (339)
T PRK07581 181 AFNGGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRN 260 (339)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccC
Confidence 000 0 0 00000 0000000000000 0 0000000
Q ss_pred ---ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC--CCCCC--ChhHHHHHHHHHHHhhcC
Q 013268 213 ---DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS--RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 213 ---~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g--gH~~~--~~~~~~~~i~~Fl~~~L~ 284 (446)
..+....+++|++|+|+|+|++|..+|++.++.+.+.+++ .+++++++ ||... .++.+...|.+|+.+++.
T Consensus 261 ~~~~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~-a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~~~~~~ 338 (339)
T PRK07581 261 PAYGGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPN-AELRPIESIWGHLAGFGQNPADIAFIDAALKELLA 338 (339)
T ss_pred cccCCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCC-CeEEEeCCCCCccccccCcHHHHHHHHHHHHHHHh
Confidence 1134456778999999999999999999999999888875 56777774 99866 788999999999999874
No 36
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.87 E-value=9.8e-21 Score=177.44 Aligned_cols=237 Identities=17% Similarity=0.131 Sum_probs=153.7
Q ss_pred EEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 013268 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (446)
Q Consensus 39 ~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~ 118 (446)
+..+.+-+|.++.+..- +.+..|+|+++||+......|+.+...|+.+||+|+++|+||+|.|+.+.....+.
T Consensus 23 ~hk~~~~~gI~~h~~e~------g~~~gP~illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt- 95 (322)
T KOG4178|consen 23 SHKFVTYKGIRLHYVEG------GPGDGPIVLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYT- 95 (322)
T ss_pred ceeeEEEccEEEEEEee------cCCCCCEEEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceee-
Confidence 34444455655554432 44678999999999999999999999999999999999999999999776544433
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC-----HHHHHH---------------
Q 013268 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLML--------------- 177 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~-----~~~~~~--------------- 177 (446)
+.-+...+..+...++.+++.++||+|||++|+.+|..+|+ |+++|+++.... ..+...
T Consensus 96 ~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y~~~fQ~~ 175 (322)
T KOG4178|consen 96 IDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYYICLFQEP 175 (322)
T ss_pred HHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccceeEecccc
Confidence 33333333334444478999999999999999999999999 999999765433 000000
Q ss_pred -------------HHHHH-HhhhCC---------chh----HHHHHHHHHHHHhhh------hcccccccch---hhhCC
Q 013268 178 -------------ELVDV-YKIRLP---------KFT----VKMAVQYMRRVIQKK------AKFDIMDLNC---LKLAP 221 (446)
Q Consensus 178 -------------~~~~~-~~~~~~---------~~~----~~~~~~~~~~~~~~~------~~~~~~~~~~---~~~l~ 221 (446)
.+... .....+ +.. .....++........ ..+..++.+. .....
T Consensus 176 ~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~ 255 (322)
T KOG4178|consen 176 GKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALA 255 (322)
T ss_pred CcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhccccccccccchhhHHHhhCchhcccccc
Confidence 00000 000000 000 011111111111000 0011111222 45567
Q ss_pred CCCCcEEEEEeCCCCCCChH-HHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 222 KTFIPALFGHASEDKFIRAR-HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
++++|+++++|..|.+.+.. ....+.+.++...+.+++++ ||+.. +|+++.+.+.+|+++.
T Consensus 256 ~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~~ 320 (322)
T KOG4178|consen 256 KITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINSF 320 (322)
T ss_pred ccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHHHhh
Confidence 89999999999999998877 44444455555545667776 99977 8999999999999875
No 37
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.86 E-value=1.5e-20 Score=174.63 Aligned_cols=204 Identities=15% Similarity=0.109 Sum_probs=133.8
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEech
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~ 145 (446)
.|+||++||++++...|..++..|.+ +|+|+++|+||+|.|..... ...+++ ++.+.+.. .++++++||||
T Consensus 4 ~~~iv~~HG~~~~~~~~~~~~~~l~~-~~~vi~~d~~G~G~s~~~~~----~~~~~~---~~~~~~~~-~~~~~lvG~S~ 74 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVFRCLDEELSA-HFTLHLVDLPGHGRSRGFGP----LSLADA---AEAIAAQA-PDPAIWLGWSL 74 (245)
T ss_pred CceEEEEcCCCCchhhHHHHHHhhcc-CeEEEEecCCcCccCCCCCC----cCHHHH---HHHHHHhC-CCCeEEEEEcH
Confidence 47899999999999999999988875 69999999999999875321 123333 33333332 26899999999
Q ss_pred hHHHHHHHHHhCCC-ccEEEEeCCccCHH-----------HHHHHHHHHHhhh-------------CC-chhHHHHHHHH
Q 013268 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLF-----------DLMLELVDVYKIR-------------LP-KFTVKMAVQYM 199 (446)
Q Consensus 146 GG~ial~~a~~~p~-v~~lVl~sp~~~~~-----------~~~~~~~~~~~~~-------------~~-~~~~~~~~~~~ 199 (446)
||.+++.++.++|+ ++++|++++..... .....+....... .. ...........
T Consensus 75 Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T TIGR01738 75 GGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGFQQQLSDDYQRTIERFLALQTLGTPTARQDARALK 154 (245)
T ss_pred HHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHH
Confidence 99999999999998 99999886643210 0111110000000 00 00000000000
Q ss_pred HHHHhhh--------hcc-cccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--C
Q 013268 200 RRVIQKK--------AKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--R 267 (446)
Q Consensus 200 ~~~~~~~--------~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~ 267 (446)
....... ..+ .....+....+.++++|+++++|++|.+++++..+.+.+.++ +.+++++++ ||+.. +
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~e~ 233 (245)
T TIGR01738 155 QTLLARPTPNVQVLQAGLEILATVDLRQPLQNISVPFLRLYGYLDGLVPAKVVPYLDKLAP-HSELYIFAKAAHAPFLSH 233 (245)
T ss_pred HHhhccCCCCHHHHHHHHHHhhcccHHHHHhcCCCCEEEEeecCCcccCHHHHHHHHHhCC-CCeEEEeCCCCCCccccC
Confidence 0000000 000 011123345567899999999999999999999998888877 467888886 99966 7
Q ss_pred hhHHHHHHHHHH
Q 013268 268 PQFYYDSVSIFF 279 (446)
Q Consensus 268 ~~~~~~~i~~Fl 279 (446)
|+++.+.|.+|+
T Consensus 234 p~~~~~~i~~fi 245 (245)
T TIGR01738 234 AEAFCALLVAFK 245 (245)
T ss_pred HHHHHHHHHhhC
Confidence 899999998885
No 38
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.86 E-value=9.8e-21 Score=173.31 Aligned_cols=202 Identities=19% Similarity=0.254 Sum_probs=132.7
Q ss_pred EEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHH
Q 013268 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (446)
Q Consensus 69 VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ 148 (446)
|||+||++++...|..+++.|+ +||+|+++|+||+|.|..... ......++..+.+..+.+....++++++|||+||.
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~G~G~s~~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~ 78 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALA-RGYRVIAFDLPGHGRSDPPPD-YSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGM 78 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHH-TTSEEEEEECTTSTTSSSHSS-GSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHh-CCCEEEEEecCCccccccccc-cCCcchhhhhhhhhhcccccccccccccccccccc
Confidence 7999999999999999999995 799999999999999986553 11122333333333333444668999999999999
Q ss_pred HHHHHHHhCCC-ccEEEEeCCccCHHHHH-----HHHHHHHh----hhCCch---------hHHHHHHHHHHHHhhhhcc
Q 013268 149 TSLLYGAEDPS-IAGMVLDSAFSDLFDLM-----LELVDVYK----IRLPKF---------TVKMAVQYMRRVIQKKAKF 209 (446)
Q Consensus 149 ial~~a~~~p~-v~~lVl~sp~~~~~~~~-----~~~~~~~~----~~~~~~---------~~~~~~~~~~~~~~~~~~~ 209 (446)
+++.++..+|+ |+++|++++........ ..+..... ...... ...................
T Consensus 79 ~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (228)
T PF12697_consen 79 IALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLAWRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEY 158 (228)
T ss_dssp HHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccceeecccccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccccccc
Confidence 99999999998 99999999988653321 11111100 000000 0000001110000000000
Q ss_pred -c--ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHH
Q 013268 210 -D--IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYD 273 (446)
Q Consensus 210 -~--~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~ 273 (446)
. ....+....++++++|+++++|++|.+++.+..+.+.+.++ +.+++++++ ||+.. +|+++.+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~~~~~~~~~~~-~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 159 LRSNLWQADLSEALPRIKVPVLVIHGEDDPIVPPESAEELADKLP-NAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHHHHHHHHHHHGSSSEEEEEEETTSSSSHHHHHHHHHHHST-TEEEEEETTSSSTHHHHSHHHHHH
T ss_pred cccccccccccccccccCCCeEEeecCCCCCCCHHHHHHHHHHCC-CCEEEEECCCCCccHHHCHHHHhc
Confidence 0 11223345667789999999999999999999999998887 568899986 99966 6666654
No 39
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=1.1e-19 Score=182.74 Aligned_cols=222 Identities=16% Similarity=0.137 Sum_probs=140.5
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCc-chHH-HHHHHHHHHHhcCCCCcEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKD-DLKVVVSYLRGNKQTSRIGLW 141 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~-~~~~-D~~~~i~~l~~~~~~~~i~lv 141 (446)
+.+|+|||+||++++...|...+..|.+ +|+|+++|+||+|.|+........ .... .+.+.+..+.+..+.++++|+
T Consensus 103 ~~~p~vvllHG~~~~~~~~~~~~~~L~~-~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lv 181 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFFFRNFDALAS-RFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILL 181 (402)
T ss_pred CCCCEEEEECCCCcchhHHHHHHHHHHh-CCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEE
Confidence 4679999999999998888888888876 599999999999999754322111 1111 222233333334467899999
Q ss_pred EechhHHHHHHHHHhCCC-ccEEEEeCCccCHH--HH----HHH----H----HHHH-hhh-CCc------------hhH
Q 013268 142 GRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLF--DL----MLE----L----VDVY-KIR-LPK------------FTV 192 (446)
Q Consensus 142 G~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~--~~----~~~----~----~~~~-~~~-~~~------------~~~ 192 (446)
||||||.+++.+|.++|+ |+++|+++|..... .. ... + .... ... .|. ...
T Consensus 182 GhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gp~~~~l~~ 261 (402)
T PLN02894 182 GHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLWESNFTPQKIIRGLGPWGPNLVR 261 (402)
T ss_pred EECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHhhcCCCHHHHHHhccchhHHHHH
Confidence 999999999999999998 99999987653110 00 000 0 0000 000 000 000
Q ss_pred HH---------------------HHHHHHHHH----------hhhhcc-cccccchhhhCCCCCCcEEEEEeCCCCCCCh
Q 013268 193 KM---------------------AVQYMRRVI----------QKKAKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRA 240 (446)
Q Consensus 193 ~~---------------------~~~~~~~~~----------~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (446)
.. ..+++.... ...... .....+....+.+|++|+++|+|++|.+.+
T Consensus 262 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~I~vP~liI~G~~D~i~~- 340 (402)
T PLN02894 262 RYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGAFARKPLLESASEWKVPTTFIYGRHDWMNY- 340 (402)
T ss_pred HHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCchhhcchHhhhcccCCCCEEEEEeCCCCCCc-
Confidence 00 000000000 000000 011223334577899999999999998765
Q ss_pred HHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhhcCCCC
Q 013268 241 RHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVLHPPQ 287 (446)
Q Consensus 241 ~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~L~~~~ 287 (446)
.....+.+..+...+++++++ ||+.. +|+.+.+.|.+|++.++....
T Consensus 341 ~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~~~~~~~~~ 390 (402)
T PLN02894 341 EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYACRKYLSPDR 390 (402)
T ss_pred HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHHHHhccCCc
Confidence 556666666655567888887 99866 789999999999999998643
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.86 E-value=1.3e-19 Score=176.16 Aligned_cols=233 Identities=17% Similarity=0.174 Sum_probs=146.5
Q ss_pred EEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHH
Q 013268 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKD 120 (446)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~ 120 (446)
.+...||.+|++..+. ....++||++||++++...+ .+...+...+|+|+++|+||||.|........ ...+
T Consensus 8 ~~~~~~~~~l~y~~~g------~~~~~~lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~-~~~~ 79 (306)
T TIGR01249 8 YLNVSDNHQLYYEQSG------NPDGKPVVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEE-NTTW 79 (306)
T ss_pred eEEcCCCcEEEEEECc------CCCCCEEEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCccc-CCHH
Confidence 4555678888876542 22356799999988765432 34445556789999999999999985432222 2245
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHH------------HHHHHHHhhhC
Q 013268 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM------------LELVDVYKIRL 187 (446)
Q Consensus 121 D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~------------~~~~~~~~~~~ 187 (446)
++.+.+..+.+..+.++++++||||||.+++.++.++|+ ++++|+.+++....... ......+....
T Consensus 80 ~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (306)
T TIGR01249 80 DLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRFMDSI 159 (306)
T ss_pred HHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHHhhhC
Confidence 666666666666677899999999999999999999998 99999987654311100 00000010000
Q ss_pred CchhH--HHHHH--------------HHHHHHhh-h----h--------------------c----------ccccccch
Q 013268 188 PKFTV--KMAVQ--------------YMRRVIQK-K----A--------------------K----------FDIMDLNC 216 (446)
Q Consensus 188 ~~~~~--~~~~~--------------~~~~~~~~-~----~--------------------~----------~~~~~~~~ 216 (446)
+.... ..... ........ . . . +.......
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (306)
T TIGR01249 160 PENERNEQLVNAYHDRLQSGDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFLDVENFI 239 (306)
T ss_pred ChhhhhccHHHHHHHHccCCCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchhcCchHH
Confidence 00000 00000 00000000 0 0 0 00000012
Q ss_pred hhhCCCC-CCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhhc
Q 013268 217 LKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 217 ~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L 283 (446)
...+.++ ++|+|+++|++|.++|++.++.+++.+++ .+++++++ ||....+ +..+.|.+|+..+|
T Consensus 240 ~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~gH~~~~~-~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 240 LDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPE-AELKVTNNAGHSAFDP-NNLAALVHALETYL 306 (306)
T ss_pred HHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCC-CEEEEECCCCCCCCCh-HHHHHHHHHHHHhC
Confidence 2345566 59999999999999999999999999874 56888886 9998755 45688888887764
No 41
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.86 E-value=7.1e-20 Score=175.12 Aligned_cols=236 Identities=17% Similarity=0.225 Sum_probs=148.9
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCC----ChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG----CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~----~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~ 113 (446)
+.+.+. .+|.+|.+.++.|.. ...+.||++||+.. +...+..+++.|+++||+|+++|+||||.|.+....
T Consensus 3 ~~~~~~-~~~~~l~g~~~~p~~----~~~~~vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~ 77 (274)
T TIGR03100 3 RALTFS-CEGETLVGVLHIPGA----SHTTGVLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLG 77 (274)
T ss_pred eeEEEE-cCCcEEEEEEEcCCC----CCCCeEEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCC
Confidence 456665 567899999998852 23456777776653 333456778999999999999999999999865322
Q ss_pred CCcchHHHHHHHHHHHHhcC-CCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHH-HHHHH-HHHhh-----
Q 013268 114 LGWHEKDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDL-MLELV-DVYKI----- 185 (446)
Q Consensus 114 ~~~~~~~D~~~~i~~l~~~~-~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~-~~~~~-~~~~~----- 185 (446)
.. ...+|+.++++++++.. +.++|+++||||||.+++.+|...+.|+++|+++|+...... ..... ..+..
T Consensus 78 ~~-~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~~~~v~~lil~~p~~~~~~~~~~~~~~~~~~~~~~~~ 156 (274)
T TIGR03100 78 FE-GIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPADLRVAGLVLLNPWVRTEAAQAASRIRHYYLGQLLSA 156 (274)
T ss_pred HH-HHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhhCCCccEEEEECCccCCcccchHHHHHHHHHHHHhCh
Confidence 11 22688999999998764 457899999999999999998766669999999988542210 00001 00000
Q ss_pred -----hCC-chhHHHHHHHHHH-HHhh--hh---cccccccchhhhCCCCCCcEEEEEeCCCCCCChHHH------HHHH
Q 013268 186 -----RLP-KFTVKMAVQYMRR-VIQK--KA---KFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS------DLIF 247 (446)
Q Consensus 186 -----~~~-~~~~~~~~~~~~~-~~~~--~~---~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~------~~l~ 247 (446)
..+ ..........+.. .... .. ............+.++++|+|+++|..|...+ +.. ....
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~P~ll~~g~~D~~~~-~~~~~~~~~~~~~ 235 (274)
T TIGR03100 157 DFWRKLLSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAERMKAGLERFQGPVLFILSGNDLTAQ-EFADSVLGEPAWR 235 (274)
T ss_pred HHHHHhcCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHHHHHHHHHhcCCcEEEEEcCcchhHH-HHHHHhccChhhH
Confidence 000 0000000111111 0000 00 00001122334555779999999999998853 221 3333
Q ss_pred HHcC-CCcEEEEeCC-CCCCC---ChhHHHHHHHHHHH
Q 013268 248 NAYA-GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFY 280 (446)
Q Consensus 248 ~~l~-~~~~~~~~~g-gH~~~---~~~~~~~~i~~Fl~ 280 (446)
+.+. ..+++..+++ +|+.. .++++.+.|.+||+
T Consensus 236 ~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL~ 273 (274)
T TIGR03100 236 GALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWLR 273 (274)
T ss_pred HHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHHh
Confidence 4343 4677888876 99875 45789999999985
No 42
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.86 E-value=1e-19 Score=173.97 Aligned_cols=216 Identities=14% Similarity=0.182 Sum_probs=138.4
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC-CCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS-LGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~-~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 142 (446)
+.+|+|||+||++.+...|..++..|.++||+|+++|+||||.|...... .++ .+++..+.+++......++++|+|
T Consensus 16 ~~~p~vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~--~~~~~~l~~~i~~l~~~~~v~lvG 93 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTF--DEYNKPLIDFLSSLPENEKVILVG 93 (273)
T ss_pred CCCCeEEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCH--HHHHHHHHHHHHhcCCCCCEEEEE
Confidence 55789999999999999999999999888999999999999987543321 222 233344445554432347999999
Q ss_pred echhHHHHHHHHHhCCC-ccEEEEeCCccC-----HHHHHHHHH---HHHhh------hC------Cc--hhHHHHHHHH
Q 013268 143 RSMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----LFDLMLELV---DVYKI------RL------PK--FTVKMAVQYM 199 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p~-v~~lVl~sp~~~-----~~~~~~~~~---~~~~~------~~------~~--~~~~~~~~~~ 199 (446)
|||||.+++.++..+|+ |+++|++++... ......... ..... .. .. ........++
T Consensus 94 hS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (273)
T PLN02211 94 HSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL 173 (273)
T ss_pred ECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH
Confidence 99999999999999987 999999876432 111110000 00000 00 00 0000000000
Q ss_pred HH-----------HHhhhhcc-cccccchhhhCCCC-CCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 013268 200 RR-----------VIQKKAKF-DIMDLNCLKLAPKT-FIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (446)
Q Consensus 200 ~~-----------~~~~~~~~-~~~~~~~~~~l~~i-~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~ 266 (446)
.. ........ .....+......++ ++|+++|.|++|..+|++..+.+.+.++.. +++.+++||..+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~~-~~~~l~~gH~p~ 252 (273)
T PLN02211 174 YQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYIKTLHDHVVKPEQQEAMIKRWPPS-QVYELESDHSPF 252 (273)
T ss_pred hcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEEEeCCCCCCCHHHHHHHHHhCCcc-EEEEECCCCCcc
Confidence 00 00000000 00111111123345 789999999999999999999999988754 677778999976
Q ss_pred --ChhHHHHHHHHHHHhh
Q 013268 267 --RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 267 --~~~~~~~~i~~Fl~~~ 282 (446)
.|+++.+.|.++....
T Consensus 253 ls~P~~~~~~i~~~a~~~ 270 (273)
T PLN02211 253 FSTPFLLFGLLIKAAASV 270 (273)
T ss_pred ccCHHHHHHHHHHHHHHh
Confidence 8999998888876543
No 43
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.85 E-value=5.1e-20 Score=171.13 Aligned_cols=210 Identities=17% Similarity=0.201 Sum_probs=134.9
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHH-HHHHHhcCCCCcEEEEEec
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV-VSYLRGNKQTSRIGLWGRS 144 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~-i~~l~~~~~~~~i~lvG~S 144 (446)
+|+||++||++++...|..++..|+ +||+|+++|+||+|.|........ ...+++... +..+.+..+.++++++|||
T Consensus 1 ~~~vv~~hG~~~~~~~~~~~~~~L~-~~~~v~~~d~~g~G~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~G~S 78 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADWQALIELLG-PHFRCLAIDLPGHGSSQSPDEIER-YDFEEAAQDILATLLDQLGIEPFFLVGYS 78 (251)
T ss_pred CCEEEEEcCCCCchhhHHHHHHHhc-ccCeEEEEcCCCCCCCCCCCccCh-hhHHHHHHHHHHHHHHHcCCCeEEEEEec
Confidence 3789999999999999999999998 799999999999999976432222 223444433 5566666567899999999
Q ss_pred hhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHH---H------HHHHHhh-----------hCCc------hhHHHHHH
Q 013268 145 MGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML---E------LVDVYKI-----------RLPK------FTVKMAVQ 197 (446)
Q Consensus 145 ~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~---~------~~~~~~~-----------~~~~------~~~~~~~~ 197 (446)
+||.+++.+|.++|+ |+++|++++......... . ....... ..+. ........
T Consensus 79 ~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (251)
T TIGR03695 79 MGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLAQRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQA 158 (251)
T ss_pred cHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhhhHHHhcCccHHHHHHhcCceeeecccCChHHhHH
Confidence 999999999999998 999999887543221000 0 0000000 0000 00000000
Q ss_pred HHHHH--------Hhhhhccc-ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC-
Q 013268 198 YMRRV--------IQKKAKFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS- 266 (446)
Q Consensus 198 ~~~~~--------~~~~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~- 266 (446)
..... ........ ....+....+.++++|+++++|++|..++ +..+.+.+..+ ..+++++++ ||+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~D~~~~-~~~~~~~~~~~-~~~~~~~~~~gH~~~~ 236 (251)
T TIGR03695 159 LRAKRLANNPEGLAKMLRATGLGKQPSLWPKLQALTIPVLYLCGEKDEKFV-QIAKEMQKLLP-NLTLVIIANAGHNIHL 236 (251)
T ss_pred HHHhcccccchHHHHHHHHhhhhcccchHHHhhCCCCceEEEeeCcchHHH-HHHHHHHhcCC-CCcEEEEcCCCCCcCc
Confidence 00000 00000000 00112334567889999999999998764 45566665554 467888887 99876
Q ss_pred -ChhHHHHHHHHHH
Q 013268 267 -RPQFYYDSVSIFF 279 (446)
Q Consensus 267 -~~~~~~~~i~~Fl 279 (446)
.++++.+.|.+|+
T Consensus 237 e~~~~~~~~i~~~l 250 (251)
T TIGR03695 237 ENPEAFAKILLAFL 250 (251)
T ss_pred cChHHHHHHHHHHh
Confidence 7888888998887
No 44
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.85 E-value=1.9e-19 Score=178.91 Aligned_cols=227 Identities=14% Similarity=0.126 Sum_probs=146.1
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC-cchHHHH
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-WHEKDDL 122 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~-~~~~~D~ 122 (446)
..+|.++.+... +....|+|||+||++++...|..++..|++ +|+|+++|+||||.|+......+ ....+++
T Consensus 111 ~~~~~~~~y~~~------G~~~~~~ivllHG~~~~~~~w~~~~~~L~~-~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~ 183 (383)
T PLN03084 111 SSDLFRWFCVES------GSNNNPPVLLIHGFPSQAYSYRKVLPVLSK-NYHAIAFDWLGFGFSDKPQPGYGFNYTLDEY 183 (383)
T ss_pred cCCceEEEEEec------CCCCCCeEEEECCCCCCHHHHHHHHHHHhc-CCEEEEECCCCCCCCCCCcccccccCCHHHH
Confidence 467777765543 223468999999999999999999988875 79999999999999986543211 1124444
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH-----HHHHHHHHHHH-h---h-------
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL-----FDLMLELVDVY-K---I------- 185 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~-----~~~~~~~~~~~-~---~------- 185 (446)
.+.+..+.+..+.++++|+|||+||.+++.+|..+|+ |+++|++++.... ......+.... . .
T Consensus 184 a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~ 263 (383)
T PLN03084 184 VSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRAS 263 (383)
T ss_pred HHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHH
Confidence 4444444444477899999999999999999999998 9999999876431 11111000000 0 0
Q ss_pred --hC----Cc-hhHHHHHHHH-------------HHHHhhhhcccccc--cchhh--hCCCCCCcEEEEEeCCCCCCChH
Q 013268 186 --RL----PK-FTVKMAVQYM-------------RRVIQKKAKFDIMD--LNCLK--LAPKTFIPALFGHASEDKFIRAR 241 (446)
Q Consensus 186 --~~----~~-~~~~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~--~l~~i~~PvLii~G~~D~~vp~~ 241 (446)
.+ +. ........+. ....... ...... .+... ...++++|+|+++|+.|.+++.+
T Consensus 264 ~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~-~~~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~ 342 (383)
T PLN03084 264 DKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSM-KKELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYD 342 (383)
T ss_pred hhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHh-hcccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHH
Confidence 00 00 0000000000 0000000 000000 00001 11357899999999999999999
Q ss_pred HHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHH
Q 013268 242 HSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 242 ~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~ 280 (446)
.++.+.+.. +.++.++++ ||+.. .|+++.+.|.+|+.
T Consensus 343 ~~~~~a~~~--~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~ 382 (383)
T PLN03084 343 GVEDFCKSS--QHKLIELPMAGHHVQEDCGEELGGIISGILS 382 (383)
T ss_pred HHHHHHHhc--CCeEEEECCCCCCcchhCHHHHHHHHHHHhh
Confidence 888888763 457888887 99977 78999999999986
No 45
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.85 E-value=8.2e-20 Score=182.25 Aligned_cols=210 Identities=18% Similarity=0.144 Sum_probs=138.5
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
+..|+|||+||++++...|..+...|.+ +|+|+++|+||||.|........ .+++.+.+..+.+..+..+++++||
T Consensus 129 ~~~~~vl~~HG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~G~s~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~lvG~ 204 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNWLFNHAALAA-GRPVIALDLPGHGASSKAVGAGS---LDELAAAVLAFLDALGIERAHLVGH 204 (371)
T ss_pred CCCCeEEEECCCCCccchHHHHHHHHhc-CCEEEEEcCCCCCCCCCCCCCCC---HHHHHHHHHHHHHhcCCccEEEEee
Confidence 4568999999999999999999888876 59999999999999965433222 4566665666656667789999999
Q ss_pred chhHHHHHHHHHhCCC-ccEEEEeCCccCHHH----HHH------------HHHHHHhhhCCchhHHHHHHHHH------
Q 013268 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LML------------ELVDVYKIRLPKFTVKMAVQYMR------ 200 (446)
Q Consensus 144 S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~----~~~------------~~~~~~~~~~~~~~~~~~~~~~~------ 200 (446)
||||.+++.+|..+|. ++++|++++...... ... ............+..........
T Consensus 205 S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (371)
T PRK14875 205 SMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDYIDGFVAAESRRELKPVLELLFADPALVTRQMVEDLLKYKRLDG 284 (371)
T ss_pred chHHHHHHHHHHhCchheeEEEEECcCCcCcccchhHHHHhhcccchhHHHHHHHHHhcChhhCCHHHHHHHHHHhcccc
Confidence 9999999999999986 999999887532110 000 00000000000000000000000
Q ss_pred ------HHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHH
Q 013268 201 ------RVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFY 271 (446)
Q Consensus 201 ------~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~ 271 (446)
..............+....+.++++|+|+++|++|.++|++.++.+ ....++.++++ ||+.. +|+++
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~~~l----~~~~~~~~~~~~gH~~~~e~p~~~ 360 (371)
T PRK14875 285 VDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHAQGL----PDGVAVHVLPGAGHMPQMEAAADV 360 (371)
T ss_pred HHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHHhhc----cCCCeEEEeCCCCCChhhhCHHHH
Confidence 0000000000111233345678899999999999999998876544 34567888996 99976 78888
Q ss_pred HHHHHHHHHh
Q 013268 272 YDSVSIFFYN 281 (446)
Q Consensus 272 ~~~i~~Fl~~ 281 (446)
.+.|.+||++
T Consensus 361 ~~~i~~fl~~ 370 (371)
T PRK14875 361 NRLLAEFLGK 370 (371)
T ss_pred HHHHHHHhcc
Confidence 8899898864
No 46
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.85 E-value=1.4e-19 Score=169.45 Aligned_cols=203 Identities=16% Similarity=0.223 Sum_probs=128.0
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEech
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~ 145 (446)
.|+|||+||++++...|..++..| + +|+|+++|+||||.|..... .. .+++.+.+..+.+..+.++++++||||
T Consensus 2 ~p~vvllHG~~~~~~~w~~~~~~l-~-~~~vi~~D~~G~G~S~~~~~-~~---~~~~~~~l~~~l~~~~~~~~~lvG~S~ 75 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDWQPVGEAL-P-DYPRLYIDLPGHGGSAAISV-DG---FADVSRLLSQTLQSYNILPYWLVGYSL 75 (242)
T ss_pred CCEEEEECCCCCChHHHHHHHHHc-C-CCCEEEecCCCCCCCCCccc-cC---HHHHHHHHHHHHHHcCCCCeEEEEECH
Confidence 478999999999999999999887 3 69999999999999975432 12 333333333333344678999999999
Q ss_pred hHHHHHHHHHhCC-C-ccEEEEeCCccCHHH---HHHHHH--HHHhhhCCchh-HHHHHHH-------------HHHHHh
Q 013268 146 GAVTSLLYGAEDP-S-IAGMVLDSAFSDLFD---LMLELV--DVYKIRLPKFT-VKMAVQY-------------MRRVIQ 204 (446)
Q Consensus 146 GG~ial~~a~~~p-~-v~~lVl~sp~~~~~~---~~~~~~--~~~~~~~~~~~-~~~~~~~-------------~~~~~~ 204 (446)
||.+++.+|.++| + |+++|+.++...... ...... ..+...+.... ......+ ......
T Consensus 76 Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (242)
T PRK11126 76 GGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQEPLEQVLADWYQQPVFASLNAEQRQQLVA 155 (242)
T ss_pred HHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccCcHHHHHHHHHhcchhhccCccHHHHHHH
Confidence 9999999999985 4 999999876543211 000000 00000000000 0000000 000000
Q ss_pred hh---------hc---cc-ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--Ch
Q 013268 205 KK---------AK---FD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RP 268 (446)
Q Consensus 205 ~~---------~~---~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~ 268 (446)
.. .. .. ....+....+.++++|+++++|++|..+. .+.+.. +.+++++++ ||+.. +|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~-----~~~~~~--~~~~~~i~~~gH~~~~e~p 228 (242)
T PRK11126 156 KRSNNNGAAVAAMLEATSLAKQPDLRPALQALTFPFYYLCGERDSKFQ-----ALAQQL--ALPLHVIPNAGHNAHRENP 228 (242)
T ss_pred hcccCCHHHHHHHHHhcCcccCCcHHHHhhccCCCeEEEEeCCcchHH-----HHHHHh--cCeEEEeCCCCCchhhhCh
Confidence 00 00 00 01123345677899999999999998652 223332 467888887 99977 89
Q ss_pred hHHHHHHHHHHHh
Q 013268 269 QFYYDSVSIFFYN 281 (446)
Q Consensus 269 ~~~~~~i~~Fl~~ 281 (446)
+++.+.|.+|+.+
T Consensus 229 ~~~~~~i~~fl~~ 241 (242)
T PRK11126 229 AAFAASLAQILRL 241 (242)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999865
No 47
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.85 E-value=2.6e-19 Score=168.30 Aligned_cols=244 Identities=15% Similarity=0.118 Sum_probs=156.3
Q ss_pred CCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 013268 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 31 ~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~ 110 (446)
...++..+.+.+. ++..+......+ +...++++||+||+|+....|..-.+.|+. ..+|+++|++|+|.|+.+
T Consensus 61 ~~v~~~~~~v~i~--~~~~iw~~~~~~----~~~~~~plVliHGyGAg~g~f~~Nf~~La~-~~~vyaiDllG~G~SSRP 133 (365)
T KOG4409|consen 61 VPVPYSKKYVRIP--NGIEIWTITVSN----ESANKTPLVLIHGYGAGLGLFFRNFDDLAK-IRNVYAIDLLGFGRSSRP 133 (365)
T ss_pred cCCCcceeeeecC--CCceeEEEeecc----cccCCCcEEEEeccchhHHHHHHhhhhhhh-cCceEEecccCCCCCCCC
Confidence 3555655555554 555555444443 336778999999999999999888888887 799999999999999977
Q ss_pred CcCCCcch-HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH------------H
Q 013268 111 YVSLGWHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL------------M 176 (446)
Q Consensus 111 ~~~~~~~~-~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~------------~ 176 (446)
........ ...+.+.|+..+...++++..|+|||+||++|..+|.++|+ |+.+||++|+.-.... .
T Consensus 134 ~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w 213 (365)
T KOG4409|consen 134 KFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEW 213 (365)
T ss_pred CCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHH
Confidence 66554332 44566777777777788999999999999999999999999 9999999986422110 0
Q ss_pred HHHHHHH-------------hhhCCchhHHHHHHHHHHH--------Hhhh----h---------------cccccccch
Q 013268 177 LELVDVY-------------KIRLPKFTVKMAVQYMRRV--------IQKK----A---------------KFDIMDLNC 216 (446)
Q Consensus 177 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~--------~~~~----~---------------~~~~~~~~~ 216 (446)
......+ +..-|.+.-.+..+..... +... . .........
T Consensus 214 ~~~~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~Ar~Pm 293 (365)
T KOG4409|consen 214 YKALFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGWARRPM 293 (365)
T ss_pred HhhhhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccchhhhhH
Confidence 0000000 0000000000000000000 0000 0 000001112
Q ss_pred hhhCCCCC--CcEEEEEeCCCCCCChHHHHHHHHH-cCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 217 LKLAPKTF--IPALFGHASEDKFIRARHSDLIFNA-YAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 217 ~~~l~~i~--~PvLii~G~~D~~vp~~~~~~l~~~-l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
.+.+..++ +|+++|+|++|-+= .....++.+. ....++++++++ ||+.. +|+.+.+.|..++++.
T Consensus 294 ~~r~~~l~~~~pv~fiyG~~dWmD-~~~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~~~~ 364 (365)
T KOG4409|consen 294 IQRLRELKKDVPVTFIYGDRDWMD-KNAGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEECDKV 364 (365)
T ss_pred HHHHHhhccCCCEEEEecCccccc-chhHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHHhcc
Confidence 23333344 99999999999763 4445555544 344578888888 99866 8999999999988753
No 48
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.85 E-value=4.1e-20 Score=193.45 Aligned_cols=129 Identities=21% Similarity=0.304 Sum_probs=107.4
Q ss_pred ECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh----hHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 013268 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA----DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (446)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~----~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~ 118 (446)
++.||.+|.+.+|.|. ..++.|+||++||++.+.. ........|+++||.|+++|+||+|.|++.....+..+
T Consensus 2 ~~~DG~~L~~~~~~P~---~~~~~P~Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~ 78 (550)
T TIGR00976 2 PMRDGTRLAIDVYRPA---GGGPVPVILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDE 78 (550)
T ss_pred cCCCCCEEEEEEEecC---CCCCCCEEEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCccc
Confidence 5689999999999997 3457899999999997653 12234567889999999999999999998765554456
Q ss_pred HHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH
Q 013268 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD 174 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~ 174 (446)
.+|+.++++|+.++... .+|+++|+|+||.+++.+|..+|. ++++|+.++..++..
T Consensus 79 ~~D~~~~i~~l~~q~~~~~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d~~~ 136 (550)
T TIGR00976 79 AADGYDLVDWIAKQPWCDGNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWDLYR 136 (550)
T ss_pred chHHHHHHHHHHhCCCCCCcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccchhH
Confidence 89999999999887543 799999999999999999999876 999999888776553
No 49
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=99.85 E-value=9.6e-20 Score=176.39 Aligned_cols=238 Identities=23% Similarity=0.304 Sum_probs=155.7
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc--
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-- 112 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~-- 112 (446)
++..++.|.+.+|..|.++++.|.. ..++.|+||.+||+++....+.... .++.+||.|+.+|.||.|....+..
T Consensus 54 ~~vy~v~f~s~~g~~V~g~l~~P~~--~~~~~Pavv~~hGyg~~~~~~~~~~-~~a~~G~~vl~~d~rGqg~~~~d~~~~ 130 (320)
T PF05448_consen 54 VEVYDVSFESFDGSRVYGWLYRPKN--AKGKLPAVVQFHGYGGRSGDPFDLL-PWAAAGYAVLAMDVRGQGGRSPDYRGS 130 (320)
T ss_dssp EEEEEEEEEEGGGEEEEEEEEEES---SSSSEEEEEEE--TT--GGGHHHHH-HHHHTT-EEEEE--TTTSSSS-B-SSB
T ss_pred EEEEEEEEEccCCCEEEEEEEecCC--CCCCcCEEEEecCCCCCCCCccccc-ccccCCeEEEEecCCCCCCCCCCcccc
Confidence 4557899999999999999999984 3478899999999999877776654 4678899999999999993221100
Q ss_pred ---------CCCcc----------hHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccC
Q 013268 113 ---------SLGWH----------EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD 171 (446)
Q Consensus 113 ---------~~~~~----------~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~ 171 (446)
..+.. .+.|...++++++++.++ ++|++.|.|+||.+++.+|+.+++|+++++..|+..
T Consensus 131 ~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~l~slpevD~~rI~v~G~SqGG~lal~~aaLd~rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 131 SGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDFLRSLPEVDGKRIGVTGGSQGGGLALAAAALDPRVKAAAADVPFLC 210 (320)
T ss_dssp SSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST-SEEEEESESSS
T ss_pred CCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHHHHhCCCcCcceEEEEeecCchHHHHHHHHhCccccEEEecCCCcc
Confidence 00111 157888999999998766 799999999999999999999999999999888654
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHH---H-hhhhcc-cccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHH
Q 013268 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRV---I-QKKAKF-DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (446)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~-~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l 246 (446)
-......... ...+......+++.. - .....+ .+.-+|.....++|++|+++..|-.|+++|+......
T Consensus 211 d~~~~~~~~~------~~~~y~~~~~~~~~~d~~~~~~~~v~~~L~Y~D~~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~ 284 (320)
T PF05448_consen 211 DFRRALELRA------DEGPYPEIRRYFRWRDPHHEREPEVFETLSYFDAVNFARRIKCPVLFSVGLQDPVCPPSTQFAA 284 (320)
T ss_dssp SHHHHHHHT--------STTTHHHHHHHHHHSCTHCHHHHHHHHHHTT-HHHHGGG--SEEEEEEETT-SSS-HHHHHHH
T ss_pred chhhhhhcCC------ccccHHHHHHHHhccCCCcccHHHHHHHHhhhhHHHHHHHcCCCEEEEEecCCCCCCchhHHHH
Confidence 3322211111 011111222222200 0 000001 1122466677889999999999999999999999999
Q ss_pred HHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhh
Q 013268 247 FNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (446)
Q Consensus 247 ~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~ 282 (446)
++.++.++++.+++. ||... ++...+...+||.++
T Consensus 285 yN~i~~~K~l~vyp~~~He~~-~~~~~~~~~~~l~~~ 320 (320)
T PF05448_consen 285 YNAIPGPKELVVYPEYGHEYG-PEFQEDKQLNFLKEH 320 (320)
T ss_dssp HCC--SSEEEEEETT--SSTT-HHHHHHHHHHHHHH-
T ss_pred HhccCCCeeEEeccCcCCCch-hhHHHHHHHHHHhcC
Confidence 999998999999998 77655 333367788998764
No 50
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.84 E-value=2.9e-19 Score=173.80 Aligned_cols=217 Identities=16% Similarity=0.255 Sum_probs=147.5
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 142 (446)
...|.||++||++++...|...+..|.+. |+.|+++|++|+|.++.......++ ..+....+..+-......+++++|
T Consensus 56 ~~~~pvlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~-~~~~v~~i~~~~~~~~~~~~~lvg 134 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYT-LRELVELIRRFVKEVFVEPVSLVG 134 (326)
T ss_pred CCCCcEEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCcee-hhHHHHHHHHHHHhhcCcceEEEE
Confidence 57899999999999999999999888776 5999999999999655433333333 555566665555555667799999
Q ss_pred echhHHHHHHHHHhCCC-ccEEE---EeCCccCHHH----H----HHHHHHHHhhhCCc---hhHH-----H--------
Q 013268 143 RSMGAVTSLLYGAEDPS-IAGMV---LDSAFSDLFD----L----MLELVDVYKIRLPK---FTVK-----M-------- 194 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p~-v~~lV---l~sp~~~~~~----~----~~~~~~~~~~~~~~---~~~~-----~-------- 194 (446)
||+||.+|+.+|+.+|+ |+.+| ++++.....+ . +...........|. .+.. .
T Consensus 135 hS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 214 (326)
T KOG1454|consen 135 HSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALELLIPLSLTEPVRLVSEGLLRCLKVVY 214 (326)
T ss_pred eCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhhhcCccccccchhheeHhhhcceeeec
Confidence 99999999999999999 99999 6555443211 1 11111111111110 0000 0
Q ss_pred -----HHHHHHHHHh--------hhhcccc----c--ccchhhhCCCCC-CcEEEEEeCCCCCCChHHHHHHHHHcCCCc
Q 013268 195 -----AVQYMRRVIQ--------KKAKFDI----M--DLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDK 254 (446)
Q Consensus 195 -----~~~~~~~~~~--------~~~~~~~----~--~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~ 254 (446)
........+. ....... . +......+.++. +|+|+++|+.|+++|.+.+..+.+.+ ++.
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~pvlii~G~~D~~~p~~~~~~~~~~~-pn~ 293 (326)
T KOG1454|consen 215 TDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGFDENLLSLIKKIWKCPVLIIWGDKDQIVPLELAEELKKKL-PNA 293 (326)
T ss_pred cccccchhhhhhheecccccchhhhheeeEEEeccCccchHHHhhccccCCceEEEEcCcCCccCHHHHHHHHhhC-CCc
Confidence 0000000000 0000000 0 134445667777 99999999999999999999999988 467
Q ss_pred EEEEeCC-CCCCC--ChhHHHHHHHHHHHhh
Q 013268 255 NIIKFDG-DHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 255 ~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
+++++++ ||... .|++++..|..|+.+.
T Consensus 294 ~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi~~~ 324 (326)
T KOG1454|consen 294 ELVEIPGAGHLPHLERPEEVAALLRSFIARL 324 (326)
T ss_pred eEEEeCCCCcccccCCHHHHHHHHHHHHHHh
Confidence 8888886 99977 7999999999999875
No 51
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.84 E-value=1.4e-19 Score=179.35 Aligned_cols=233 Identities=12% Similarity=0.089 Sum_probs=146.3
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-----------HHHHH---HHhccCCcEEEEeCCCC--CCCCC
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----------ANEAA---VILLPSNITLFTLDFSG--SGLSD 108 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-----------~~~~~---~~L~~~Gy~Vi~~D~~G--~G~S~ 108 (446)
.+|.+|.|..|.+. .....|+||++||++++... |..++ ..|...+|+|+++|+|| +|.|.
T Consensus 13 ~~~~~~~y~~~g~~---~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~ 89 (351)
T TIGR01392 13 LSDVRVAYETYGTL---NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTG 89 (351)
T ss_pred cCCceEEEEecccc---CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCC
Confidence 46778888887542 12345799999999997632 44453 35666789999999999 56554
Q ss_pred CC---CcC------CCcchHHHHHHHHHHHHhcCCCCc-EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH--
Q 013268 109 GD---YVS------LGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL-- 175 (446)
Q Consensus 109 ~~---~~~------~~~~~~~D~~~~i~~l~~~~~~~~-i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~-- 175 (446)
.. +.. .....++|+.+.+..+.+..+.++ ++++||||||++++.+|..+|+ |+++|++++.......
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 169 (351)
T TIGR01392 90 PSSINPGGRPYGSDFPLITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCI 169 (351)
T ss_pred CCCCCCCCCcCCCCCCCCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHH
Confidence 21 100 111236676666666666668888 9999999999999999999998 9999998876532110
Q ss_pred -HHH-HHHHHhhh-------C-----CchhHHH--------------------------------------HHHHH----
Q 013268 176 -MLE-LVDVYKIR-------L-----PKFTVKM--------------------------------------AVQYM---- 199 (446)
Q Consensus 176 -~~~-~~~~~~~~-------~-----~~~~~~~--------------------------------------~~~~~---- 199 (446)
... ........ . |...... ...+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (351)
T TIGR01392 170 AFNEVQRQAILADPNWNDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQG 249 (351)
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHH
Confidence 000 00000000 0 0000000 00000
Q ss_pred HHHHhhh---------hcccccc-----cchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEE----EEeCC
Q 013268 200 RRVIQKK---------AKFDIMD-----LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI----IKFDG 261 (446)
Q Consensus 200 ~~~~~~~---------~~~~~~~-----~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~----~~~~g 261 (446)
....... ......+ .+....+++|++|+|+|+|++|.++|++.++.+.+.+++.... .++++
T Consensus 250 ~~~~~~~d~~~~~~~~~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~ 329 (351)
T TIGR01392 250 DKFVDRFDANSYLYLTRALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESP 329 (351)
T ss_pred HHHHhhcCcchHHHHHHHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCC
Confidence 0000000 0000000 1234567789999999999999999999999999999864322 24555
Q ss_pred -CCCCC--ChhHHHHHHHHHHH
Q 013268 262 -DHNSS--RPQFYYDSVSIFFY 280 (446)
Q Consensus 262 -gH~~~--~~~~~~~~i~~Fl~ 280 (446)
||..+ +|+++.+.|.+||+
T Consensus 330 ~GH~~~le~p~~~~~~l~~FL~ 351 (351)
T TIGR01392 330 YGHDAFLVETDQVEELIRGFLR 351 (351)
T ss_pred CCcchhhcCHHHHHHHHHHHhC
Confidence 99876 78999999999973
No 52
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.82 E-value=2.3e-19 Score=154.18 Aligned_cols=143 Identities=30% Similarity=0.462 Sum_probs=120.1
Q ss_pred EEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHh-cCCCCcEEEEEechh
Q 013268 68 CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG-NKQTSRIGLWGRSMG 146 (446)
Q Consensus 68 ~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~-~~~~~~i~lvG~S~G 146 (446)
+||++||++++...|..+++.|+++||.|+.+|+||+|.+.+ ..++.++++++.. ..+.++++++|||+|
T Consensus 1 ~vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~l~G~S~G 71 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDG---------ADAVERVLADIRAGYPDPDRIILIGHSMG 71 (145)
T ss_dssp EEEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHH---------SHHHHHHHHHHHHHHCTCCEEEEEEETHH
T ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccch---------hHHHHHHHHHHHhhcCCCCcEEEEEEccC
Confidence 589999999999999999999999999999999999998732 2466777777633 236699999999999
Q ss_pred HHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCc
Q 013268 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (446)
Q Consensus 147 G~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 226 (446)
|.+++.++.+++.++++|+++++.. ...+.+.++|
T Consensus 72 g~~a~~~~~~~~~v~~~v~~~~~~~---------------------------------------------~~~~~~~~~p 106 (145)
T PF12695_consen 72 GAIAANLAARNPRVKAVVLLSPYPD---------------------------------------------SEDLAKIRIP 106 (145)
T ss_dssp HHHHHHHHHHSTTESEEEEESESSG---------------------------------------------CHHHTTTTSE
T ss_pred cHHHHHHhhhccceeEEEEecCccc---------------------------------------------hhhhhccCCc
Confidence 9999999999988999999998311 1234466679
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCC
Q 013268 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHN 264 (446)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~ 264 (446)
+++++|++|..++++..++++++++.+++++++++ +|+
T Consensus 107 v~~i~g~~D~~~~~~~~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 107 VLFIHGENDPLVPPEQVRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp EEEEEETT-SSSHHHHHHHHHHHHCSSEEEEEETTS-TT
T ss_pred EEEEEECCCCcCCHHHHHHHHHHcCCCcEEEEeCCCcCc
Confidence 99999999999999999999999998889999998 885
No 53
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=7.4e-19 Score=173.68 Aligned_cols=227 Identities=14% Similarity=0.139 Sum_probs=135.8
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh------------hHHHHHH---HhccCCcEEEEeCCCCCCCCC
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA------------DANEAAV---ILLPSNITLFTLDFSGSGLSD 108 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~------------~~~~~~~---~L~~~Gy~Vi~~D~~G~G~S~ 108 (446)
..+|.+++|..+.+ ...| +|++||++++.. .|..++. .|...+|+|+++|+||||.|.
T Consensus 42 ~~~~~~l~y~~~G~------~~~p-~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~ 114 (343)
T PRK08775 42 GLEDLRLRYELIGP------AGAP-VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSL 114 (343)
T ss_pred CCCCceEEEEEecc------CCCC-EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCC
Confidence 34677888776521 2335 555555544433 4666665 464457999999999999875
Q ss_pred CCCcCCCcchHHHHHHHHHHHHhcCCCCc-EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH---HHHHHHHHH
Q 013268 109 GDYVSLGWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---LMLELVDVY 183 (446)
Q Consensus 109 ~~~~~~~~~~~~D~~~~i~~l~~~~~~~~-i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~---~~~~~~~~~ 183 (446)
.. ... .++..+.+..+.+..+.++ ++++||||||++|+.+|.++|+ |+++|++++...... .........
T Consensus 115 ~~--~~~---~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~ 189 (343)
T PRK08775 115 DV--PID---TADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRA 189 (343)
T ss_pred CC--CCC---HHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHH
Confidence 32 121 2333333333434447755 5799999999999999999998 999999987542111 011000000
Q ss_pred hhhC-----Cch--------------hHH-------------------HHHHHHHH----HHhhhh---ccccc-ccch-
Q 013268 184 KIRL-----PKF--------------TVK-------------------MAVQYMRR----VIQKKA---KFDIM-DLNC- 216 (446)
Q Consensus 184 ~~~~-----~~~--------------~~~-------------------~~~~~~~~----~~~~~~---~~~~~-~~~~- 216 (446)
.... ... ... ....++.. ...... ..... ..+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (343)
T PRK08775 190 VALGQLQCAEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESIDLH 269 (343)
T ss_pred HHcCCCCCCchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHhhc
Confidence 0000 000 000 00000000 000000 00000 0000
Q ss_pred hhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeC--CCCCCC--ChhHHHHHHHHHHHhh
Q 013268 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD--GDHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~--ggH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
...+.+|++|+|+++|+.|.++|++.+..+.+.+.+..++++++ +||... +|+++.+.|.+||.+.
T Consensus 270 ~~~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL~~~ 339 (343)
T PRK08775 270 RVDPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTALRST 339 (343)
T ss_pred CCChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHHHhc
Confidence 12357899999999999999999999999999885456788885 499976 8999999999999865
No 54
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.82 E-value=2.2e-18 Score=161.24 Aligned_cols=242 Identities=18% Similarity=0.217 Sum_probs=155.7
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCCC-CCcCC
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDG-DYVSL 114 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~-~~~~~ 114 (446)
+...+..+||..+-..+..++ .....|.||++||+.|+.. ....++..+.++||.|+++++|||+.+.- .+..+
T Consensus 50 ~re~v~~pdg~~~~ldw~~~p---~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~y 126 (345)
T COG0429 50 TRERLETPDGGFIDLDWSEDP---RAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLY 126 (345)
T ss_pred ceEEEEcCCCCEEEEeeccCc---cccCCceEEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCccee
Confidence 334566688877777666543 5567799999999987643 34567888999999999999999997763 33333
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEechhH-HHHHHHHHhCCC--ccEEEEeCCccCHHHHHHHHHHHHh-------
Q 013268 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGA-VTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYK------- 184 (446)
Q Consensus 115 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG-~ial~~a~~~p~--v~~lVl~sp~~~~~~~~~~~~~~~~------- 184 (446)
.....+|+..++++++......++..+|+|+|| +++..++.+..+ +.+.+.++.+.++......+-..+.
T Consensus 127 h~G~t~D~~~~l~~l~~~~~~r~~~avG~SLGgnmLa~ylgeeg~d~~~~aa~~vs~P~Dl~~~~~~l~~~~s~~ly~r~ 206 (345)
T COG0429 127 HSGETEDIRFFLDWLKARFPPRPLYAVGFSLGGNMLANYLGEEGDDLPLDAAVAVSAPFDLEACAYRLDSGFSLRLYSRY 206 (345)
T ss_pred cccchhHHHHHHHHHHHhCCCCceEEEEecccHHHHHHHHHhhccCcccceeeeeeCHHHHHHHHHHhcCchhhhhhHHH
Confidence 223369999999999998888999999999999 555555554433 7777776666554321111111000
Q ss_pred ----------hhC----CchhHHHHHHHHHHHHhhhhcccc----------------cccchhhhCCCCCCcEEEEEeCC
Q 013268 185 ----------IRL----PKFTVKMAVQYMRRVIQKKAKFDI----------------MDLNCLKLAPKTFIPALFGHASE 234 (446)
Q Consensus 185 ----------~~~----~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~l~~i~~PvLii~G~~ 234 (446)
..+ +..+... ...+++. .....|+. ...+....+++|.+|+||||+.+
T Consensus 207 l~~~L~~~~~~kl~~l~~~~p~~~-~~~ik~~-~ti~eFD~~~Tap~~Gf~da~dYYr~aSs~~~L~~Ir~PtLii~A~D 284 (345)
T COG0429 207 LLRNLKRNAARKLKELEPSLPGTV-LAAIKRC-RTIREFDDLLTAPLHGFADAEDYYRQASSLPLLPKIRKPTLIINAKD 284 (345)
T ss_pred HHHHHHHHHHHHHHhcCcccCcHH-HHHHHhh-chHHhccceeeecccCCCcHHHHHHhccccccccccccceEEEecCC
Confidence 000 0011000 1111100 00001110 01245567889999999999999
Q ss_pred CCCCChHHHHHHHHHcCCCcEEEEeC-CCCCCC------Chh-HHHHHHHHHHHhhcC
Q 013268 235 DKFIRARHSDLIFNAYAGDKNIIKFD-GDHNSS------RPQ-FYYDSVSIFFYNVLH 284 (446)
Q Consensus 235 D~~vp~~~~~~l~~~l~~~~~~~~~~-ggH~~~------~~~-~~~~~i~~Fl~~~L~ 284 (446)
|++++++..-+.....++.+.+.+.+ |||... ++. ...+++.+||+..+.
T Consensus 285 DP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~~~~~~~~~W~~~ri~~~l~~~~~ 342 (345)
T COG0429 285 DPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLGGKLLHPQMWLEQRILDWLDPFLE 342 (345)
T ss_pred CCCCChhhCCcchhcCCCceEEEeecCCceEEeccCccccchhhHHHHHHHHHHHHHh
Confidence 99999987766666566666666666 599733 333 566788899988764
No 55
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.82 E-value=2e-18 Score=172.78 Aligned_cols=235 Identities=14% Similarity=0.116 Sum_probs=144.6
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-------------HHHHH---HHhccCCcEEEEeCCCCC-CCCC
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGS-GLSD 108 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-------------~~~~~---~~L~~~Gy~Vi~~D~~G~-G~S~ 108 (446)
+|.++.|..+... .....|+||++||++++... |..++ ..|...+|+|+++|++|+ |.|.
T Consensus 31 ~~~~~~y~~~G~~---~~~~~p~vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 31 PPVELAYETYGTL---NADRSNAVLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CCceEEEEecccc---CCCCCCEEEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCC
Confidence 4566677666421 12346899999999998875 44443 234356899999999983 4443
Q ss_pred CCCc-------CC----CcchHHHHHHHHHHHHhcCCCCc-EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH
Q 013268 109 GDYV-------SL----GWHEKDDLKVVVSYLRGNKQTSR-IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL 175 (446)
Q Consensus 109 ~~~~-------~~----~~~~~~D~~~~i~~l~~~~~~~~-i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~ 175 (446)
+... .. .....+++.+.+..+.+..+.++ ++++||||||.+++.+|..+|+ |+++|++++.......
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 187 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQ 187 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHH
Confidence 2210 00 01235666655555556668888 5899999999999999999998 9999998865432110
Q ss_pred ---H----HHHHHHHh------------------------------------hhCCc-h----h-----H-HHHHHHHH-
Q 013268 176 ---M----LELVDVYK------------------------------------IRLPK-F----T-----V-KMAVQYMR- 200 (446)
Q Consensus 176 ---~----~~~~~~~~------------------------------------~~~~~-~----~-----~-~~~~~~~~- 200 (446)
+ ........ ..+.. . . . .....+..
T Consensus 188 ~~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~ 267 (379)
T PRK00175 188 NIAFNEVARQAILADPDWHGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRY 267 (379)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHH
Confidence 0 00000000 00000 0 0 0 00000000
Q ss_pred ---HHHh------------hhhcccccc---cchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCC---cEEEEe
Q 013268 201 ---RVIQ------------KKAKFDIMD---LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD---KNIIKF 259 (446)
Q Consensus 201 ---~~~~------------~~~~~~~~~---~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~---~~~~~~ 259 (446)
.... ....++... .+....+.+|++|+|+|+|++|.++|++.++.+.+.+++. .+++++
T Consensus 268 ~~~~~~~~~d~~~~~~~~~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i 347 (379)
T PRK00175 268 QGDKFVERFDANSYLYLTRALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEI 347 (379)
T ss_pred HHHHHhhccCchHHHHHHHHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEe
Confidence 0000 000000000 1234567889999999999999999999999999998753 256655
Q ss_pred C-C-CCCCC--ChhHHHHHHHHHHHhhc
Q 013268 260 D-G-DHNSS--RPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 260 ~-g-gH~~~--~~~~~~~~i~~Fl~~~L 283 (446)
+ + ||..+ .|+++.+.|.+||.+.-
T Consensus 348 ~~~~GH~~~le~p~~~~~~L~~FL~~~~ 375 (379)
T PRK00175 348 DSPYGHDAFLLDDPRYGRLVRAFLERAA 375 (379)
T ss_pred CCCCCchhHhcCHHHHHHHHHHHHHhhh
Confidence 3 4 99977 88899999999998764
No 56
>PRK11071 esterase YqiA; Provisional
Probab=99.81 E-value=1.5e-18 Score=156.44 Aligned_cols=183 Identities=13% Similarity=0.129 Sum_probs=124.0
Q ss_pred cEEEEECCCCCChhhHHH--HHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 013268 67 PCVVYCHGNSGCRADANE--AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~--~~~~L~~--~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 142 (446)
|+||++||++++...|.. +...+.+ .+|+|+++|+||++ +++.+.+..+.+..+.++++++|
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~--------------~~~~~~l~~l~~~~~~~~~~lvG 67 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYP--------------ADAAELLESLVLEHGGDPLGLVG 67 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCH--------------HHHHHHHHHHHHHcCCCCeEEEE
Confidence 689999999999988873 3455554 37999999999884 23444555555555778999999
Q ss_pred echhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC
Q 013268 143 RSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK 222 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (446)
|||||.+++.+|..+| . .+|+++|..+..+.+.....................++... .. .+. ..+.
T Consensus 68 ~S~Gg~~a~~~a~~~~-~-~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~----~~-----~~~-~~i~- 134 (190)
T PRK11071 68 SSLGGYYATWLSQCFM-L-PAVVVNPAVRPFELLTDYLGENENPYTGQQYVLESRHIYDL----KV-----MQI-DPLE- 134 (190)
T ss_pred ECHHHHHHHHHHHHcC-C-CEEEECCCCCHHHHHHHhcCCcccccCCCcEEEcHHHHHHH----Hh-----cCC-ccCC-
Confidence 9999999999999998 3 45778887775444443322111000000000001111111 00 111 1133
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHH
Q 013268 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (446)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~ 280 (446)
..+|++++||++|++||++.+.++++.. .+++++| +|.+...+++.+.+.+|+.
T Consensus 135 ~~~~v~iihg~~De~V~~~~a~~~~~~~----~~~~~~ggdH~f~~~~~~~~~i~~fl~ 189 (190)
T PRK11071 135 SPDLIWLLQQTGDEVLDYRQAVAYYAAC----RQTVEEGGNHAFVGFERYFNQIVDFLG 189 (190)
T ss_pred ChhhEEEEEeCCCCcCCHHHHHHHHHhc----ceEEECCCCcchhhHHHhHHHHHHHhc
Confidence 6678999999999999999999999853 3456676 9999877899999999974
No 57
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=6.5e-19 Score=159.17 Aligned_cols=267 Identities=23% Similarity=0.271 Sum_probs=183.5
Q ss_pred hhhhhhhhccCCCCCCCCCccccccccccCCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh
Q 013268 2 IDQFINFVIRPPRAEYNPDQYLWERDFMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD 81 (446)
Q Consensus 2 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~ 81 (446)
+|+||+..++-.+.. +++..+...+++++.. +.-+++|+..+|.+|.+++.+|.. ..++.|.||-.||+++....
T Consensus 24 FdeFW~~~l~e~~~~-~~~p~l~~~d~~~~~v--e~ydvTf~g~~g~rI~gwlvlP~~--~~~~~P~vV~fhGY~g~~g~ 98 (321)
T COG3458 24 FDEFWKKTLEEARKV-PPEPVLERSDFTLPRV--EVYDVTFTGYGGARIKGWLVLPRH--EKGKLPAVVQFHGYGGRGGE 98 (321)
T ss_pred HHHHHHHHHHHHhcC-CCCceEEeccccCCce--EEEEEEEeccCCceEEEEEEeecc--cCCccceEEEEeeccCCCCC
Confidence 456665555433322 3444466666666544 458899999999999999999984 34788999999999999887
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCCCC----CCc---CCCc---------------chHHHHHHHHHHHHhcCCC--Cc
Q 013268 82 ANEAAVILLPSNITLFTLDFSGSGLSDG----DYV---SLGW---------------HEKDDLKVVVSYLRGNKQT--SR 137 (446)
Q Consensus 82 ~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~----~~~---~~~~---------------~~~~D~~~~i~~l~~~~~~--~~ 137 (446)
|..+. .++..||.|+.+|.||.|.|.. .+. ..++ ....|+..+++.+.+...+ ++
T Consensus 99 ~~~~l-~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave~~~sl~~vde~R 177 (321)
T COG3458 99 WHDML-HWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVEILASLDEVDEER 177 (321)
T ss_pred ccccc-cccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHHHHhccCccchhh
Confidence 76655 4556699999999999998732 111 1110 1256888899998887666 89
Q ss_pred EEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhh--hhcccccccc
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQK--KAKFDIMDLN 215 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 215 (446)
|++.|.|.||.+++.+++..|++++++++-|+.+-.....++. ..-+......+++..-.. .....+.-.+
T Consensus 178 i~v~G~SqGGglalaaaal~~rik~~~~~~Pfl~df~r~i~~~-------~~~~ydei~~y~k~h~~~e~~v~~TL~yfD 250 (321)
T COG3458 178 IGVTGGSQGGGLALAAAALDPRIKAVVADYPFLSDFPRAIELA-------TEGPYDEIQTYFKRHDPKEAEVFETLSYFD 250 (321)
T ss_pred eEEeccccCchhhhhhhhcChhhhcccccccccccchhheeec-------ccCcHHHHHHHHHhcCchHHHHHHHHhhhh
Confidence 9999999999999999999999999999888765332211110 001111111111111000 0000111224
Q ss_pred hhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhh
Q 013268 216 CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (446)
Q Consensus 216 ~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~ 282 (446)
....+.++++|+|+..|-.|+++|+......++++...+++.+++- +|... +....+.+..|+...
T Consensus 251 ~~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~aHe~~-p~~~~~~~~~~l~~l 317 (321)
T COG3458 251 IVNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFAHEGG-PGFQSRQQVHFLKIL 317 (321)
T ss_pred hhhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccccccC-cchhHHHHHHHHHhh
Confidence 5566788999999999999999999999999999999999999987 88865 222234455666544
No 58
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.80 E-value=6.9e-19 Score=161.95 Aligned_cols=188 Identities=23% Similarity=0.343 Sum_probs=131.1
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCCCCCC-----cCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHH
Q 013268 82 ANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYG 154 (446)
Q Consensus 82 ~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~-----~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a 154 (446)
|......|+++||.|+.+|+||.+...... ...+...++|+.++++++.++..+ ++|+|+|+|+||++++.++
T Consensus 3 f~~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~ 82 (213)
T PF00326_consen 3 FNWNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAA 82 (213)
T ss_dssp -SHHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHH
T ss_pred eeHHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhh
Confidence 345677899999999999999988544222 222334589999999999988644 8999999999999999999
Q ss_pred HhCCC-ccEEEEeCCccCHHHHHHH---HHH--HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCc
Q 013268 155 AEDPS-IAGMVLDSAFSDLFDLMLE---LVD--VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIP 226 (446)
Q Consensus 155 ~~~p~-v~~lVl~sp~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~P 226 (446)
..+|+ ++++|..+|..++...... +.. ......+..... ... ..++...+.+ +++|
T Consensus 83 ~~~~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~------------~~s~~~~~~~~~~~~P 146 (213)
T PF00326_consen 83 TQHPDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDPWDNPE----FYR------------ELSPISPADNVQIKPP 146 (213)
T ss_dssp HHTCCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSSTTTSHH----HHH------------HHHHGGGGGGCGGGSE
T ss_pred cccceeeeeeeccceecchhcccccccccccccccccCccchhhh----hhh------------hhccccccccccCCCC
Confidence 98998 8999999988765332211 110 000011100000 000 1122233334 7899
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-CCCCC---ChhHHHHHHHHHHHhhcCC
Q 013268 227 ALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS---RPQFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g-gH~~~---~~~~~~~~i~~Fl~~~L~~ 285 (446)
+|++||++|..||++++.++++++. .+.+++++++ ||... ....+.+.+.+||+++|+.
T Consensus 147 ~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~~~~~~~~~~~~f~~~~l~~ 212 (213)
T PF00326_consen 147 VLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPENRRDWYERILDFFDKYLKK 212 (213)
T ss_dssp EEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHHHHHHHHHHHHHHHHHHTT-
T ss_pred EEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCchhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999998876 3578899998 99766 3347788999999999874
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.80 E-value=2.3e-18 Score=170.60 Aligned_cols=226 Identities=15% Similarity=0.113 Sum_probs=146.3
Q ss_pred EEEEEecCCCCCCCCCcEEEEECCCCCChhhH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHH
Q 013268 51 QCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (446)
Q Consensus 51 ~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~-----~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~ 125 (446)
..+.|.|.. ....+++||++||...+...+ ..++..|+++||+|+++|++|+|.+........ ...+++.++
T Consensus 49 ~l~~~~~~~--~~~~~~pvl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d-~~~~~~~~~ 125 (350)
T TIGR01836 49 VLYRYTPVK--DNTHKTPLLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDD-YINGYIDKC 125 (350)
T ss_pred EEEEecCCC--CcCCCCcEEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHH-HHHHHHHHH
Confidence 333566642 123345699999986443333 578999999999999999999998764321111 113458889
Q ss_pred HHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH---HH---------HHHHHHhhhCCchh-
Q 013268 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL---ML---------ELVDVYKIRLPKFT- 191 (446)
Q Consensus 126 i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~---~~---------~~~~~~~~~~~~~~- 191 (446)
++++++..+..+++++||||||.+++.+++.+|+ |+++|+++++.++... .. ......+ .+|...
T Consensus 126 v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~~~ 204 (350)
T TIGR01836 126 VDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDLAVDTMG-NIPGELL 204 (350)
T ss_pred HHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHHHHHhcC-CCCHHHH
Confidence 9999988888999999999999999999999997 9999998876653210 00 0000000 000000
Q ss_pred -----------------------------------------------HHHHHHHHHHHHhhhhcccccc---cchhhhCC
Q 013268 192 -----------------------------------------------VKMAVQYMRRVIQKKAKFDIMD---LNCLKLAP 221 (446)
Q Consensus 192 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~ 221 (446)
.....+++........ +.... ......++
T Consensus 205 ~~~f~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~-l~~g~~~~~~~~~~l~ 283 (350)
T TIGR01836 205 NLTFLMLKPFSLGYQKYVNLVDILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNG-LINGEVEIGGRKVDLK 283 (350)
T ss_pred HHHHHhcCcchhhhHHHHHHHHhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCc-ccCCeeEECCEEccHH
Confidence 0000000000000000 00000 00112356
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHHHcCC-CcEEEEeCCCCCCC-----ChhHHHHHHHHHHHh
Q 013268 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDGDHNSS-----RPQFYYDSVSIFFYN 281 (446)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~~~~~~ggH~~~-----~~~~~~~~i~~Fl~~ 281 (446)
++++|+++++|++|.++|++.++.+++.++. .++++++++||... .++++++.|.+||.+
T Consensus 284 ~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl~~ 349 (350)
T TIGR01836 284 NIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWLQA 349 (350)
T ss_pred hCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHHHh
Confidence 7899999999999999999999999998874 56778888999864 257889999999975
No 60
>PLN02872 triacylglycerol lipase
Probab=99.80 E-value=3.9e-18 Score=169.92 Aligned_cols=251 Identities=18% Similarity=0.204 Sum_probs=160.5
Q ss_pred CCceeeEEEEEECCCCcEEEEEEEecCCC-CCCCCCcEEEEECCCCCChhhHH------HHHHHhccCCcEEEEeCCCCC
Q 013268 32 GRSYKRQDLEIRNARGHVLQCSHYMPSPF-PEDTPLPCVVYCHGNSGCRADAN------EAAVILLPSNITLFTLDFSGS 104 (446)
Q Consensus 32 ~~~~~~~~v~~~~~dG~~L~~~~~~P~~~-~~~~~~p~VVllHG~g~~~~~~~------~~~~~L~~~Gy~Vi~~D~~G~ 104 (446)
...|+.|+..+++.||..|....+.+... ....++|+||++||++.+...|. .++..|+++||+|+++|+||+
T Consensus 39 ~~gy~~e~h~v~T~DGy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~ 118 (395)
T PLN02872 39 PAGYSCTEHTIQTKDGYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGT 118 (395)
T ss_pred HcCCCceEEEEECCCCcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccceeecCcccchHHHHHhCCCCccccccccc
Confidence 34567788999999999998765532210 11234689999999998877762 355678899999999999998
Q ss_pred CCCCCCC---------cCCCcch--HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC----ccEEEEeCCc
Q 013268 105 GLSDGDY---------VSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAF 169 (446)
Q Consensus 105 G~S~~~~---------~~~~~~~--~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~----v~~lVl~sp~ 169 (446)
+.+.+.. ..+.+.+ ..|+.++++++.+.. ..+++++||||||.+++.++ .+|+ |+.+++++|.
T Consensus 119 ~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~-~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~ 196 (395)
T PLN02872 119 RWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT-NSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPI 196 (395)
T ss_pred ccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc-CCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcch
Confidence 8664311 1233444 369999999998653 37999999999999998554 5665 7777777776
Q ss_pred cCHHH-------HHH-----HHHHHHhh--hCCch-hHHHHHH-----------HHHHH---------------------
Q 013268 170 SDLFD-------LML-----ELVDVYKI--RLPKF-TVKMAVQ-----------YMRRV--------------------- 202 (446)
Q Consensus 170 ~~~~~-------~~~-----~~~~~~~~--~~~~~-~~~~~~~-----------~~~~~--------------------- 202 (446)
..+.. .+. .+...++. ..|.. ....... .+..+
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~C~~~~~c~~~~~~~~g~~~~~n~~~~~~~~~~~pa 276 (395)
T PLN02872 197 SYLDHVTAPLVLRMVFMHLDQMVVAMGIHQLNFRSDVLVKLLDSICEGHMDCNDLLTSITGTNCCFNASRIDYYLEYEPH 276 (395)
T ss_pred hhhccCCCHHHHHHHHHhHHHHHHHhcCceecCCcHHHHHHHHHHccCchhHHHHHHHHhCCCcccchhhhhHHHhcCCC
Confidence 43210 000 01000000 00100 0000000 00000
Q ss_pred ----------Hh--hhhccccccc----c---------hhhhCCCC--CCcEEEEEeCCCCCCChHHHHHHHHHcCCCcE
Q 013268 203 ----------IQ--KKAKFDIMDL----N---------CLKLAPKT--FIPALFGHASEDKFIRARHSDLIFNAYAGDKN 255 (446)
Q Consensus 203 ----------~~--~~~~~~~~~~----~---------~~~~l~~i--~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~ 255 (446)
.+ ....|...+. + +.-.+.++ ++|+++++|++|.+++++.++.+.+.+++..+
T Consensus 277 gtS~k~~~H~~Q~~~s~~f~~yDyg~~~n~~~Yg~~~pP~Y~l~~i~~~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~ 356 (395)
T PLN02872 277 PSSVKNLRHLFQMIRKGTFAHYDYGIFKNLKLYGQVNPPAFDLSLIPKSLPLWMGYGGTDGLADVTDVEHTLAELPSKPE 356 (395)
T ss_pred cchHHHHHHHHHHHhcCCcccCCCCchhhHHHhCCCCCCCcCcccCCCCccEEEEEcCCCCCCCHHHHHHHHHHCCCccE
Confidence 00 0001111111 1 12235566 58999999999999999999999999987567
Q ss_pred EEEeCC-CCC--C-C--ChhHHHHHHHHHHHhhcC
Q 013268 256 IIKFDG-DHN--S-S--RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 256 ~~~~~g-gH~--~-~--~~~~~~~~i~~Fl~~~L~ 284 (446)
++.+++ +|. . . .++.+++.|++|++++..
T Consensus 357 l~~l~~~gH~dfi~~~eape~V~~~Il~fL~~~~~ 391 (395)
T PLN02872 357 LLYLENYGHIDFLLSTSAKEDVYNHMIQFFRSLGK 391 (395)
T ss_pred EEEcCCCCCHHHHhCcchHHHHHHHHHHHHHHhhh
Confidence 888888 996 2 1 578899999999997654
No 61
>PRK05855 short chain dehydrogenase; Validated
Probab=99.80 E-value=7.4e-18 Score=178.13 Aligned_cols=230 Identities=16% Similarity=0.154 Sum_probs=140.3
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcc---h
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWH---E 118 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~---~ 118 (446)
+...+|.+|.++.+.+ ...|+|||+||++++...|..+...| ..||+|+++|+||||.|........+. .
T Consensus 7 ~~~~~g~~l~~~~~g~------~~~~~ivllHG~~~~~~~w~~~~~~L-~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~ 79 (582)
T PRK05855 7 VVSSDGVRLAVYEWGD------PDRPTVVLVHGYPDNHEVWDGVAPLL-ADRFRVVAYDVRGAGRSSAPKRTAAYTLARL 79 (582)
T ss_pred EEeeCCEEEEEEEcCC------CCCCeEEEEcCCCchHHHHHHHHHHh-hcceEEEEecCCCCCCCCCCCcccccCHHHH
Confidence 3457899999876632 34689999999999999999999888 568999999999999998543322211 1
Q ss_pred HHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCC--C-ccEEEEeCCccC-HH-H----------------HH
Q 013268 119 KDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFSD-LF-D----------------LM 176 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p--~-v~~lVl~sp~~~-~~-~----------------~~ 176 (446)
.+|+..+++.+ +. .+++|+||||||.+++.++.... . +..++..+++.. .. . ..
T Consensus 80 a~dl~~~i~~l----~~~~~~~lvGhS~Gg~~a~~~a~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (582)
T PRK05855 80 ADDFAAVIDAV----SPDRPVHLLAHDWGSIQGWEAVTRPRAAGRIASFTSVSGPSLDHVGFWLRSGLRRPTPRRLARAL 155 (582)
T ss_pred HHHHHHHHHHh----CCCCcEEEEecChHHHHHHHHHhCccchhhhhhheeccCCchHHHHHHHhhcccccchhhhhHHH
Confidence 45555555544 44 45999999999999988877632 2 333443332211 00 0 00
Q ss_pred HHHHHHH---hhhCCchhHHH----HHHHHHHHHhhhhcc------------------c-----ccccchhhhCCCCCCc
Q 013268 177 LELVDVY---KIRLPKFTVKM----AVQYMRRVIQKKAKF------------------D-----IMDLNCLKLAPKTFIP 226 (446)
Q Consensus 177 ~~~~~~~---~~~~~~~~~~~----~~~~~~~~~~~~~~~------------------~-----~~~~~~~~~l~~i~~P 226 (446)
....... ....+..+... ............... . ............+++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 235 (582)
T PRK05855 156 GQLLRSWYIYLFHLPVLPELLWRLGLGRAWPRLLRRVEGTPVDPIPTQTTLSDGAHGVKLYRANMIRSLSRPRERYTDVP 235 (582)
T ss_pred HHHhhhHHHHHHhCCCCcHHHhccchhhHHHHhhhhccCCCcchhhhhhhhccccchHHHHHhhhhhhhccCccCCccCc
Confidence 0000000 00000000000 000000000000000 0 0000011123458899
Q ss_pred EEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC--ChhHHHHHHHHHHHhhc
Q 013268 227 ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 227 vLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~--~~~~~~~~i~~Fl~~~L 283 (446)
+|+|+|++|.+++++....+.+.++ ...++++++||+.+ .|+++.+.|.+|+.+.-
T Consensus 236 ~lii~G~~D~~v~~~~~~~~~~~~~-~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~~~ 293 (582)
T PRK05855 236 VQLIVPTGDPYVRPALYDDLSRWVP-RLWRREIKAGHWLPMSHPQVLAAAVAEFVDAVE 293 (582)
T ss_pred eEEEEeCCCcccCHHHhccccccCC-cceEEEccCCCcchhhChhHHHHHHHHHHHhcc
Confidence 9999999999999998888877665 45677778899977 78899999999998754
No 62
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=99.78 E-value=1.2e-17 Score=154.37 Aligned_cols=190 Identities=23% Similarity=0.280 Sum_probs=133.0
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCC-CCCCCcCC--Cc---------c
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGL-SDGDYVSL--GW---------H 117 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~-S~~~~~~~--~~---------~ 117 (446)
+.+++..|. ..++.|.||++|+..|-......+++.|+++||.|+++|+-+-.. ........ .+ .
T Consensus 1 ~~ay~~~P~---~~~~~~~Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (218)
T PF01738_consen 1 IDAYVARPE---GGGPRPAVVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQ 77 (218)
T ss_dssp EEEEEEEET---TSSSEEEEEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHH
T ss_pred CeEEEEeCC---CCCCCCEEEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHH
Confidence 456788887 336889999999999988888889999999999999999864433 11111000 00 1
Q ss_pred hHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 013268 118 EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (446)
Q Consensus 118 ~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (446)
...++.+++++|+++... ++|+++|+|+||.+++.++...+.++++|...|....
T Consensus 78 ~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~~~~~a~v~~yg~~~~----------------------- 134 (218)
T PF01738_consen 78 VAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARDPRVDAAVSFYGGSPP----------------------- 134 (218)
T ss_dssp HHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCTTTSSEEEEES-SSSG-----------------------
T ss_pred HHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhccccceEEEEcCCCCC-----------------------
Confidence 146778889999988633 8999999999999999999998779999987771100
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHc---CCCcEEEEeCC-CCCCCC----
Q 013268 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAY---AGDKNIIKFDG-DHNSSR---- 267 (446)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l---~~~~~~~~~~g-gH~~~~---- 267 (446)
........++++|+++++|++|+.++.+....+.+.+ ....++++|+| +|.+..
T Consensus 135 ------------------~~~~~~~~~~~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~~~~~~~y~ga~HgF~~~~~~ 196 (218)
T PF01738_consen 135 ------------------PPPLEDAPKIKAPVLILFGENDPFFPPEEVEALEEALKAAGVDVEVHVYPGAGHGFANPSRP 196 (218)
T ss_dssp ------------------GGHHHHGGG--S-EEEEEETT-TTS-HHHHHHHHHHHHCTTTTEEEEEETT--TTTTSTTST
T ss_pred ------------------CcchhhhcccCCCEeecCccCCCCCChHHHHHHHHHHHhcCCcEEEEECCCCcccccCCCCc
Confidence 0111334567799999999999999999888888777 35778999998 998762
Q ss_pred ------hhHHHHHHHHHHHhhc
Q 013268 268 ------PQFYYDSVSIFFYNVL 283 (446)
Q Consensus 268 ------~~~~~~~i~~Fl~~~L 283 (446)
.+..++++++||+++|
T Consensus 197 ~~~~~aa~~a~~~~~~ff~~~L 218 (218)
T PF01738_consen 197 PYDPAAAEDAWQRTLAFFKRHL 218 (218)
T ss_dssp T--HHHHHHHHHHHHHHHCC--
T ss_pred ccCHHHHHHHHHHHHHHHHhcC
Confidence 1356788889998876
No 63
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.77 E-value=4.9e-17 Score=187.56 Aligned_cols=217 Identities=14% Similarity=0.103 Sum_probs=141.4
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc-----CCCcchHHHHHHHHHHHHhcCCCCcEE
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV-----SLGWHEKDDLKVVVSYLRGNKQTSRIG 139 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~-----~~~~~~~~D~~~~i~~l~~~~~~~~i~ 139 (446)
..|+|||+||++++...|..++..|.+ +|+|+++|+||||.|..... .......+++.+.+..+.+..+.++++
T Consensus 1370 ~~~~vVllHG~~~s~~~w~~~~~~L~~-~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~ 1448 (1655)
T PLN02980 1370 EGSVVLFLHGFLGTGEDWIPIMKAISG-SARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVT 1448 (1655)
T ss_pred CCCeEEEECCCCCCHHHHHHHHHHHhC-CCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 468999999999999999999988876 69999999999999975321 011122455555555444555678999
Q ss_pred EEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH----HHHH-----HH--------HHh-hhCCch------hHHH
Q 013268 140 LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL----MLEL-----VD--------VYK-IRLPKF------TVKM 194 (446)
Q Consensus 140 lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~----~~~~-----~~--------~~~-~~~~~~------~~~~ 194 (446)
|+||||||.+++.++.++|+ |+++|++++....... .... .. .+. ...... ....
T Consensus 1449 LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 1528 (1655)
T PLN02980 1449 LVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDHGLEIFLENWYSGELWKSLRNHPH 1528 (1655)
T ss_pred EEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhhhHHHHHHHhccHHHhhhhccCHH
Confidence 99999999999999999998 9999998764322110 0000 00 000 000000 0000
Q ss_pred HHHHHHHHHhh---------hhccc-ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCC-----------
Q 013268 195 AVQYMRRVIQK---------KAKFD-IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----------- 253 (446)
Q Consensus 195 ~~~~~~~~~~~---------~~~~~-~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~----------- 253 (446)
........... ...+. ....+....++++++|+|+|+|++|..++ +.+.++.+.+++.
T Consensus 1529 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dl~~~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~~~~~~~~~ 1607 (1655)
T PLN02980 1529 FNKIVASRLLHKDVPSLAKLLSDLSIGRQPSLWEDLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKESGNDKGKEI 1607 (1655)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhcccchHHHHHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccccccccccc
Confidence 00000000000 00000 01122335678899999999999999875 6677777776642
Q ss_pred cEEEEeCC-CCCCC--ChhHHHHHHHHHHHhhc
Q 013268 254 KNIIKFDG-DHNSS--RPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 254 ~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~~L 283 (446)
.+++++++ ||..+ +|+++.+.|.+||.+.-
T Consensus 1608 a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1608 IEIVEIPNCGHAVHLENPLPVIRALRKFLTRLH 1640 (1655)
T ss_pred eEEEEECCCCCchHHHCHHHHHHHHHHHHHhcc
Confidence 47888887 99977 89999999999999754
No 64
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.77 E-value=2.3e-16 Score=169.23 Aligned_cols=259 Identities=16% Similarity=0.205 Sum_probs=173.4
Q ss_pred CCCceeeEEEEEECC-----CC--cEEEEEEEecCCCCCCCCCcEEEEECCCCCC-------------------h---h-
Q 013268 31 AGRSYKRQDLEIRNA-----RG--HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC-------------------R---A- 80 (446)
Q Consensus 31 ~~~~~~~~~v~~~~~-----dG--~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~-------------------~---~- 80 (446)
...+.-||.+.+.+. || -.|.+.+.+|.....+-+-|+|.-.-.+... . .
T Consensus 164 ~~~~~ire~v~Vet~~Dtd~dg~~D~v~~~i~rP~~~~~g~k~p~i~~aspY~~g~~~~~~~~~~~~~~~~l~~~~~~~~ 243 (767)
T PRK05371 164 DTSQLIREVVYVETPVDTDQDGKLDLVKVTIVRPKETASGLKVPVIMTASPYYQGTNDVANDKKLHNVDVELYAKPPRAQ 243 (767)
T ss_pred CcccceEEEEEEeCCCCCCCCCCcceEEEEEECCCccCCCCccceEEecCccccCCCCcccccccccCCccccccCCccc
Confidence 344456788888764 45 3488889999753333356766643332110 0 0
Q ss_pred -----------------------hHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhc-----
Q 013268 81 -----------------------DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN----- 132 (446)
Q Consensus 81 -----------------------~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~----- 132 (446)
....+.++|+++||.|+.+|.||+|.|+|.....+..+.+|..++|+|+..+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~ 323 (767)
T PRK05371 244 FTPLKTQPRKLPVGPAEESFTHINSYSLNDYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYT 323 (767)
T ss_pred cccccccccccCCCccchhhccCcchhHHHHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCcccc
Confidence 0113457899999999999999999999987776677899999999999853
Q ss_pred ----------CC-CCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHH-----------------HHHH
Q 013268 133 ----------KQ-TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLEL-----------------VDVY 183 (446)
Q Consensus 133 ----------~~-~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~-----------------~~~~ 183 (446)
.. .++|+++|.|+||.+++.+|+..|. ++++|..++..+..+..... ....
T Consensus 324 d~~~~~~~kq~WsnGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is~~yd~yr~~G~~~~~~g~~ged~d~l~~~~ 403 (767)
T PRK05371 324 DRTRGKEVKADWSNGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAISSWYDYYRENGLVRAPGGYQGEDLDVLAELT 403 (767)
T ss_pred ccccccccccCCCCCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCCcHHHHhhcCCceeccCCcCCcchhhHHHHh
Confidence 12 2799999999999999999988766 99999999888766543220 0000
Q ss_pred hhh--CCch---hHHHHHHHHHHH---Hhhh-hcc--cccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC-
Q 013268 184 KIR--LPKF---TVKMAVQYMRRV---IQKK-AKF--DIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA- 251 (446)
Q Consensus 184 ~~~--~~~~---~~~~~~~~~~~~---~~~~-~~~--~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~- 251 (446)
..+ .+.. ............ .... ..+ .....+....+.+|++|+|++||..|..++++++.++++.++
T Consensus 404 ~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~ 483 (767)
T PRK05371 404 YSRNLLAGDYLRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPE 483 (767)
T ss_pred hhcccCcchhhcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHh
Confidence 000 0000 000000000000 0000 000 012335667778999999999999999999999999988875
Q ss_pred --CCcEEEEeCCCCCCC---ChhHHHHHHHHHHHhhcCCCCCC
Q 013268 252 --GDKNIIKFDGDHNSS---RPQFYYDSVSIFFYNVLHPPQIP 289 (446)
Q Consensus 252 --~~~~~~~~~ggH~~~---~~~~~~~~i~~Fl~~~L~~~~~~ 289 (446)
.++++++.+++|... ...++.+.+.+||+++|++..+.
T Consensus 484 ~g~pkkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd~~LkG~~ng 526 (767)
T PRK05371 484 NGVPKKLFLHQGGHVYPNNWQSIDFRDTMNAWFTHKLLGIDNG 526 (767)
T ss_pred cCCCeEEEEeCCCccCCCchhHHHHHHHHHHHHHhccccCCCC
Confidence 356787778899754 34578889999999999876543
No 65
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=99.76 E-value=8.6e-18 Score=169.33 Aligned_cols=318 Identities=14% Similarity=0.133 Sum_probs=201.3
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEEC--CCCCC---hhhHHHHHH---HhccCCcEEEEeCCCCCCC
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCH--GNSGC---RADANEAAV---ILLPSNITLFTLDFSGSGL 106 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllH--G~g~~---~~~~~~~~~---~L~~~Gy~Vi~~D~~G~G~ 106 (446)
|..+++.+++.||++|+..+|.|+ ..++.|+++..+ .+... ......... .++.+||.|+..|.||.|.
T Consensus 17 ~~~~~v~V~MRDGvrL~~dIy~Pa---~~g~~Pvll~~~~~Py~k~~~~~~~~~~~~p~~~~~aa~GYavV~qDvRG~~~ 93 (563)
T COG2936 17 YIERDVMVPMRDGVRLAADIYRPA---GAGPLPVLLSRTRLPYRKRNGTFGPQLSALPQPAWFAAQGYAVVNQDVRGRGG 93 (563)
T ss_pred eeeeeeeEEecCCeEEEEEEEccC---CCCCCceeEEeeccccccccccCcchhhcccccceeecCceEEEEeccccccc
Confidence 567889999999999999999998 568999999999 55443 111222333 7899999999999999999
Q ss_pred CCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHH-------
Q 013268 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML------- 177 (446)
Q Consensus 107 S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~------- 177 (446)
|+|........+++|..++|+|+.++... ++|+++|.|++|+.++.+|+..|. +++++..++..+.+....
T Consensus 94 SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D~y~d~~~~~G~~~ 173 (563)
T COG2936 94 SEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVDRYRDDAFYGGGAE 173 (563)
T ss_pred CCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccccccccccccccCcchh
Confidence 99998877656899999999999999776 899999999999999999999887 999998777665332110
Q ss_pred -HHHHHHh----hhCC----ch-------hHHHH---H-----------H-HHHHHHhhhhccc-ccccchhhhCCCCCC
Q 013268 178 -ELVDVYK----IRLP----KF-------TVKMA---V-----------Q-YMRRVIQKKAKFD-IMDLNCLKLAPKTFI 225 (446)
Q Consensus 178 -~~~~~~~----~~~~----~~-------~~~~~---~-----------~-~~~~~~~~~~~~~-~~~~~~~~~l~~i~~ 225 (446)
.....+. ...+ .. +.... . . +....+......+ ....+......++++
T Consensus 174 ~~~~~~W~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~~~~~~hp~~ddfW~~~~~~~d~~~i~v 253 (563)
T COG2936 174 LNFNLGWALTMLAPQPLTRIRPARLDRLAPLRVGAERWRDAPTELLEGEPYFLELWLEHPLRDDFWRRGDRVADLSKIKV 253 (563)
T ss_pred hhhhHHHHhhhcccCcccccccccccccchhhhhhccccccccchhccCcccchhhhcCCCccchhhccCcccccccCCC
Confidence 0000000 0000 00 00000 0 0 0000000000000 111244556778999
Q ss_pred cEEEEEeCCCCCCChHHHHHHHHHcCC-CcEEEEeCCCCCCC---Ch-----hHHHHHHHHHHHhhcCCCCCCCCCc---
Q 013268 226 PALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKFDGDHNSS---RP-----QFYYDSVSIFFYNVLHPPQIPSTHS--- 293 (446)
Q Consensus 226 PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~~~~~~ggH~~~---~~-----~~~~~~i~~Fl~~~L~~~~~~~~~~--- 293 (446)
|+|+|.|..|.. ......++..+.. ...+++-+-.|... .+ .+-.+...+|++.++.......+.+
T Consensus 254 P~L~i~gW~D~~--l~~~~~~~~~~~~r~~~lvvgPw~H~~~~~~~~~~~y~~~al~~~~~~l~~~~~~~~~~~~~r~~~ 331 (563)
T COG2936 254 PALVIGGWSDGY--LHTAIKLFAFLRSRPVKLVVGPWTHGGPEWEGPGKDYGATALSWQDDFLDAYLDDKENDPADRAGV 331 (563)
T ss_pred cEEEEccccccc--ccchHHHhhhcccCCceeEEcccccCCCcccccccchhhhhhhhhHhhhhHhhhhcccChhhcCCC
Confidence 999999999985 4445555555554 45566666677754 11 1222333445555444222211111
Q ss_pred cccccccccCccccCCccchhHHHHHHhhhhhhccccccCCCCCCCCCCCcchhHHhhhhcCccccccCCCCCCCCCccc
Q 013268 294 IKAEKYYDLGALKFGASMDQSLLYEIITGLRCASTDAASSSSAPPSILTAKPVDELLSEAVPIASKENSAVNEDEPSSFQ 373 (446)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~e~~~~~i~~~l~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (446)
.....++..+ ...-.+....||+++..|++|+|+...+.+..+.+++..-.|..+...
T Consensus 332 ~p~v~~~~~~----------------------~~~W~~~~~WPp~~t~~t~~yl~a~~~l~~~ap~~~~~~~~yv~dp~~ 389 (563)
T COG2936 332 RPVVRYFTMG----------------------GNHWRSATTWPPAPTTTTPLYLNAGGRLLQDAPASDESADEYVYDPLN 389 (563)
T ss_pred CCceEeeccC----------------------CccceecccCCCCCceeeeeEEccCCccccCCCCCCCccceEeecCCC
Confidence 1122222222 222334677888999999999999999999988887765555444433
Q ss_pred ccccCC
Q 013268 374 DKLSGL 379 (446)
Q Consensus 374 ~~~~~~ 379 (446)
....+.
T Consensus 390 p~~s~g 395 (563)
T COG2936 390 PVPSFG 395 (563)
T ss_pred CcccCC
Confidence 444444
No 66
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=99.76 E-value=3.7e-17 Score=156.28 Aligned_cols=217 Identities=16% Similarity=0.178 Sum_probs=138.8
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH----H------HHhccCCcEEEEeCCCCCCCCCCCCcCCC
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----A------VILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~----~------~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~ 115 (446)
||.+|.+.+|+| .....++.|+||..|+++......... . ..|+++||.|+..|.||.|.|+|......
T Consensus 1 DGv~L~adv~~P-~~~~~~~~P~il~~tpY~~~~~~~~~~~~~~~~~~~~~~~~~~~GY~vV~~D~RG~g~S~G~~~~~~ 79 (272)
T PF02129_consen 1 DGVRLAADVYRP-GADGGGPFPVILTRTPYGKGDQTASDLAGANPGPPSARRPFAERGYAVVVQDVRGTGGSEGEFDPMS 79 (272)
T ss_dssp TS-EEEEEEEEE---TTSSSEEEEEEEESSTCTC-HHHHHHTTCHHSHGGGHHHHHTT-EEEEEE-TTSTTS-S-B-TTS
T ss_pred CCCEEEEEEEec-CCCCCCcccEEEEccCcCCCCCcccchhhhhcccchhHHHHHhCCCEEEEECCcccccCCCccccCC
Confidence 799999999999 333778999999999999754221111 1 12899999999999999999999987766
Q ss_pred cchHHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH---------------HH--
Q 013268 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD---------------LM-- 176 (446)
Q Consensus 116 ~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~---------------~~-- 176 (446)
..+.+|..++|+|+..+... .+|+++|.|++|..++.+|+..|. +++++...+..++.. ..
T Consensus 80 ~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d~~~~~~~~gG~~~~~~~~~w~~ 159 (272)
T PF02129_consen 80 PNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSDLYRDSIYPGGAFRLGFFAGWED 159 (272)
T ss_dssp HHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SBTCCTSSEETTEEBCCHHHHHHH
T ss_pred hhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCcccccchhcCCcccccchhHHHH
Confidence 67799999999999999655 799999999999999999996655 999999766554321 11
Q ss_pred -HHHHHHHhhhCCchh--HHHH-------HHH----------HHHHHhhhh-cccccccchhhhCCCCCCcEEEEEeCCC
Q 013268 177 -LELVDVYKIRLPKFT--VKMA-------VQY----------MRRVIQKKA-KFDIMDLNCLKLAPKTFIPALFGHASED 235 (446)
Q Consensus 177 -~~~~~~~~~~~~~~~--~~~~-------~~~----------~~~~~~~~~-~~~~~~~~~~~~l~~i~~PvLii~G~~D 235 (446)
............... .... ... ...+..... .......+....+.++++|+|++.|..|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~i~vP~l~v~Gw~D 239 (272)
T PF02129_consen 160 LQSQQEDPQSRPAPDRDYLRERARYEALGDSPLGRLPRDPPYWDEWLDHPPYDPFWQERSPSERLDKIDVPVLIVGGWYD 239 (272)
T ss_dssp HHHHHHHHTCCCCSSSHHHHHHHHHHCHHHHHHHHCHGGTHHHHHHHHT-SSSHHHHTTBHHHHHGG--SEEEEEEETTC
T ss_pred HHHHhhcccCCCchhhhhhhhhhhhhhhhhHHHhhhccccHHHHHHHhCCCcCHHHHhCChHHHHhhCCCCEEEecccCC
Confidence 111111111111100 0000 000 011110000 0011122344456889999999999999
Q ss_pred CCCChHHHHHHHHHcCCCc----EEEEeCCCCC
Q 013268 236 KFIRARHSDLIFNAYAGDK----NIIKFDGDHN 264 (446)
Q Consensus 236 ~~vp~~~~~~l~~~l~~~~----~~~~~~ggH~ 264 (446)
..+. ..+.+.++.+.... ++++-+++|.
T Consensus 240 ~~~~-~~~~~~~~~l~~~~~~~~~Liigpw~H~ 271 (272)
T PF02129_consen 240 TLFL-RGALRAYEALRAPGSKPQRLIIGPWTHG 271 (272)
T ss_dssp SSTS-HHHHHHHHHHCTTSTC-EEEEEESESTT
T ss_pred cccc-hHHHHHHHHhhcCCCCCCEEEEeCCCCC
Confidence 7776 78888888887554 7888888995
No 67
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=3.8e-17 Score=154.07 Aligned_cols=137 Identities=19% Similarity=0.280 Sum_probs=108.1
Q ss_pred EEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCC----hhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC
Q 013268 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC----RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (446)
Q Consensus 40 v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~----~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~ 115 (446)
+.+++..|. +.+.++.|. ..++.|+|||+||+++. ...|..+++.|+++||.|+++|+||||.|.+......
T Consensus 3 ~~l~~~~g~-~~~~~~~p~---~~~~~~~VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~ 78 (266)
T TIGR03101 3 FFLDAPHGF-RFCLYHPPV---AVGPRGVVIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAAR 78 (266)
T ss_pred EEecCCCCc-EEEEEecCC---CCCCceEEEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCC
Confidence 455555555 556666665 33457899999999864 3345667889999999999999999999987654444
Q ss_pred cch-HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHH
Q 013268 116 WHE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (446)
Q Consensus 116 ~~~-~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~ 181 (446)
+.. .+|+..+++++++. +..+++++||||||.+++.++.++|+ ++++|+.+|..+....+..+..
T Consensus 79 ~~~~~~Dv~~ai~~L~~~-~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g~~~l~~~lr 145 (266)
T TIGR03101 79 WDVWKEDVAAAYRWLIEQ-GHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSGKQQLQQFLR 145 (266)
T ss_pred HHHHHHHHHHHHHHHHhc-CCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccchHHHHHHHHH
Confidence 333 68899999999876 57899999999999999999999987 9999999999887776666433
No 68
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.75 E-value=5.9e-16 Score=150.20 Aligned_cols=269 Identities=15% Similarity=0.159 Sum_probs=162.5
Q ss_pred CCCCCCccccccccc------cC-CCceeeEEEEEECCCCcEEEEEEEecCCC---CCCCCCcEEEEECCCCCChhh--H
Q 013268 15 AEYNPDQYLWERDFM------LA-GRSYKRQDLEIRNARGHVLQCSHYMPSPF---PEDTPLPCVVYCHGNSGCRAD--A 82 (446)
Q Consensus 15 ~~~~~~~~~~~~~~~------~~-~~~~~~~~v~~~~~dG~~L~~~~~~P~~~---~~~~~~p~VVllHG~g~~~~~--~ 82 (446)
..|-+..|.....++ +. ......+...++.+||..+..+++.+... +.....|+||++||..+++.. .
T Consensus 64 ~~y~p~~w~~~ghlQT~~~~~~~~~p~~~y~Reii~~~DGG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YV 143 (409)
T KOG1838|consen 64 EKYLPTLWLFSGHLQTLLLSFFGSKPPVEYTREIIKTSDGGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYV 143 (409)
T ss_pred cccccceeecCCeeeeeehhhcCCCCCCcceeEEEEeCCCCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHH
Confidence 345554555555443 11 12233455557778999999998877643 123577999999999865433 3
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCC-CCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC--
Q 013268 83 NEAAVILLPSNITLFTLDFSGSGLSDG-DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-- 159 (446)
Q Consensus 83 ~~~~~~L~~~Gy~Vi~~D~~G~G~S~~-~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-- 159 (446)
..++..+.++||+|++++.||+|.+.- .+..+.....+|+.++++++++++...++..+|.||||.+.+.+.++..+
T Consensus 144 r~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~ 223 (409)
T KOG1838|consen 144 RHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNT 223 (409)
T ss_pred HHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCC
Confidence 456777888899999999999988762 22333333379999999999999998999999999999999999998654
Q ss_pred --ccEEEEeCCccCH--HHHHHH-----HHHH-HhhhCCchh-------------------HHHHHHHHHHHHhhhhccc
Q 013268 160 --IAGMVLDSAFSDL--FDLMLE-----LVDV-YKIRLPKFT-------------------VKMAVQYMRRVIQKKAKFD 210 (446)
Q Consensus 160 --v~~lVl~sp~~~~--~~~~~~-----~~~~-~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~ 210 (446)
+.|+++.+|+..+ ...+.. .... ....+.... .+...++=.........+.
T Consensus 224 ~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~ 303 (409)
T KOG1838|consen 224 PLIAAVAVCNPWDLLAASRSIETPLYRRFYNRALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFK 303 (409)
T ss_pred CceeEEEEeccchhhhhhhHHhcccchHHHHHHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCC
Confidence 4555555665432 111000 0000 000000000 0000011111111111111
Q ss_pred c-----cccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC-CcEEEEe-CCCCCCC------ChhHHHHH-HH
Q 013268 211 I-----MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIKF-DGDHNSS------RPQFYYDS-VS 276 (446)
Q Consensus 211 ~-----~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~~~~~-~ggH~~~------~~~~~~~~-i~ 276 (446)
. ...+....+.+|++|+|+|++.+|+++|.+.. ...+...+ ..-+++- .|||... ....+.+. +.
T Consensus 304 ~~deYY~~aSs~~~v~~I~VP~L~ina~DDPv~p~~~i-p~~~~~~np~v~l~~T~~GGHlgfleg~~p~~~~w~~~~l~ 382 (409)
T KOG1838|consen 304 SVDEYYKKASSSNYVDKIKVPLLCINAADDPVVPEEAI-PIDDIKSNPNVLLVITSHGGHLGFLEGLWPSARTWMDKLLV 382 (409)
T ss_pred cHHHHHhhcchhhhcccccccEEEEecCCCCCCCcccC-CHHHHhcCCcEEEEEeCCCceeeeeccCCCccchhHHHHHH
Confidence 1 12345677889999999999999999998622 22222223 3323333 3699733 34566666 77
Q ss_pred HHHHhhcC
Q 013268 277 IFFYNVLH 284 (446)
Q Consensus 277 ~Fl~~~L~ 284 (446)
+|+.+...
T Consensus 383 ef~~~~~~ 390 (409)
T KOG1838|consen 383 EFLGNAIF 390 (409)
T ss_pred HHHHHHHh
Confidence 88877654
No 69
>PRK10115 protease 2; Provisional
Probab=99.75 E-value=2e-16 Score=168.62 Aligned_cols=245 Identities=15% Similarity=0.124 Sum_probs=168.0
Q ss_pred CceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 013268 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 33 ~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~ 110 (446)
..+..+.+.+++.||.+|.+.+..++.....++.|+||++||+.+... .|......|+++||.|+.+++||.|.-...
T Consensus 412 ~~~~~e~v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~ 491 (686)
T PRK10115 412 ANYRSEHLWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQ 491 (686)
T ss_pred cccEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHH
Confidence 356789999999999999985544332223456799999999887653 366667789999999999999998766533
Q ss_pred CcCC-----CcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHH
Q 013268 111 YVSL-----GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDV 182 (446)
Q Consensus 111 ~~~~-----~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~ 182 (446)
.... .....+|+.+++++|.++.-. +++++.|.|.||+++..++.++|+ ++++|+..|+.++...+..-
T Consensus 492 w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D~~~~~~~~--- 568 (686)
T PRK10115 492 WYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVDVVTTMLDE--- 568 (686)
T ss_pred HHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchhHhhhcccC---
Confidence 2221 224589999999999988433 799999999999999999999999 99999999998876543110
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcc-cccccchhhhCCCCCCc-EEEEEeCCCCCCChHHHHHHHHHcC---CCcEEE
Q 013268 183 YKIRLPKFTVKMAVQYMRRVIQKKAKF-DIMDLNCLKLAPKTFIP-ALFGHASEDKFIRARHSDLIFNAYA---GDKNII 257 (446)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~i~~P-vLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~ 257 (446)
.+|.... ....+ ... .....+ .+...++...+.+++.| +|+++|.+|..||+.++.++..++. .+..++
T Consensus 569 ---~~p~~~~-~~~e~-G~p-~~~~~~~~l~~~SP~~~v~~~~~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~~~~v 642 (686)
T PRK10115 569 ---SIPLTTG-EFEEW-GNP-QDPQYYEYMKSYSPYDNVTAQAYPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTDDHLL 642 (686)
T ss_pred ---CCCCChh-HHHHh-CCC-CCHHHHHHHHHcCchhccCccCCCceeEEecCCCCCcCchHHHHHHHHHHhcCCCCceE
Confidence 0010000 00000 000 000001 11235677888888999 6677999999999999999998875 234555
Q ss_pred Ee---CC-CCCCC-ChhHHH---HHHHHHHHhhcCCC
Q 013268 258 KF---DG-DHNSS-RPQFYY---DSVSIFFYNVLHPP 286 (446)
Q Consensus 258 ~~---~g-gH~~~-~~~~~~---~~i~~Fl~~~L~~~ 286 (446)
++ ++ ||... .....+ .....|+-..+...
T Consensus 643 l~~~~~~~GHg~~~~r~~~~~~~A~~~aFl~~~~~~~ 679 (686)
T PRK10115 643 LLCTDMDSGHGGKSGRFKSYEGVAMEYAFLIALAQGT 679 (686)
T ss_pred EEEecCCCCCCCCcCHHHHHHHHHHHHHHHHHHhCCc
Confidence 55 55 99854 222222 33457877776543
No 70
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.75 E-value=4.6e-17 Score=142.36 Aligned_cols=229 Identities=22% Similarity=0.272 Sum_probs=159.7
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~ 112 (446)
...+.+.+++..+.++.+.+. ..+...++|++||+-.+.. .+..++..|.+.||.++.+|++|.|.|.+.+.
T Consensus 8 ~~~~~ivi~n~~ne~lvg~lh------~tgs~e~vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~ 81 (269)
T KOG4667|consen 8 QIAQKIVIPNSRNEKLVGLLH------ETGSTEIVVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFY 81 (269)
T ss_pred eeeeEEEeccCCCchhhccee------ccCCceEEEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccc
Confidence 345678888888888887554 4467789999999987654 45677889999999999999999999998765
Q ss_pred CCCc-chHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHH-----HHH---
Q 013268 113 SLGW-HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELV-----DVY--- 183 (446)
Q Consensus 113 ~~~~-~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~-----~~~--- 183 (446)
.-.+ .+++|+..+++++... ...--+++|||-||.+++.++.+++++.-+|-+++-.++...+.+.+ ...
T Consensus 82 ~Gn~~~eadDL~sV~q~~s~~-nr~v~vi~gHSkGg~Vvl~ya~K~~d~~~viNcsGRydl~~~I~eRlg~~~l~~ike~ 160 (269)
T KOG4667|consen 82 YGNYNTEADDLHSVIQYFSNS-NRVVPVILGHSKGGDVVLLYASKYHDIRNVINCSGRYDLKNGINERLGEDYLERIKEQ 160 (269)
T ss_pred cCcccchHHHHHHHHHHhccC-ceEEEEEEeecCccHHHHHHHHhhcCchheEEcccccchhcchhhhhcccHHHHHHhC
Confidence 4433 4589999999999763 22223689999999999999999999999998888776654442111 100
Q ss_pred -hhhCC----chhHHHHHHHHHHHHhhhhcccccccchhhhCC--CCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEE
Q 013268 184 -KIRLP----KFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP--KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNI 256 (446)
Q Consensus 184 -~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~ 256 (446)
.+..+ .+...+....+...+ ..+..+... ..+||||-+||..|.+||.+.+.++++.+++ +.+
T Consensus 161 Gfid~~~rkG~y~~rvt~eSlmdrL---------ntd~h~aclkId~~C~VLTvhGs~D~IVPve~AkefAk~i~n-H~L 230 (269)
T KOG4667|consen 161 GFIDVGPRKGKYGYRVTEESLMDRL---------NTDIHEACLKIDKQCRVLTVHGSEDEIVPVEDAKEFAKIIPN-HKL 230 (269)
T ss_pred CceecCcccCCcCceecHHHHHHHH---------hchhhhhhcCcCccCceEEEeccCCceeechhHHHHHHhccC-Cce
Confidence 00000 011111111000000 011112222 2469999999999999999999999999997 779
Q ss_pred EEeCC-CCCCC-ChhHHHHHHHHHHH
Q 013268 257 IKFDG-DHNSS-RPQFYYDSVSIFFY 280 (446)
Q Consensus 257 ~~~~g-gH~~~-~~~~~~~~i~~Fl~ 280 (446)
.+++| +|... ...+.......|..
T Consensus 231 ~iIEgADHnyt~~q~~l~~lgl~f~k 256 (269)
T KOG4667|consen 231 EIIEGADHNYTGHQSQLVSLGLEFIK 256 (269)
T ss_pred EEecCCCcCccchhhhHhhhcceeEE
Confidence 99998 99988 44455555545543
No 71
>PLN02442 S-formylglutathione hydrolase
Probab=99.75 E-value=3.2e-16 Score=150.41 Aligned_cols=229 Identities=16% Similarity=0.174 Sum_probs=139.9
Q ss_pred EEEEC-CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHH---HHHHhccCCcEEEEeCCCCCCCCC-CCC---
Q 013268 40 LEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSD-GDY--- 111 (446)
Q Consensus 40 v~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~---~~~~L~~~Gy~Vi~~D~~G~G~S~-~~~--- 111 (446)
+.+.+ .-|..+.+.+|+|+.. ..++.|+|+++||++++...|.. +...+...|+.|+++|..++|... +..
T Consensus 21 ~~~~s~~l~~~~~~~vy~P~~~-~~~~~Pvv~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~ 99 (283)
T PLN02442 21 YKHFSSTLGCSMTFSVYFPPAS-DSGKVPVLYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSW 99 (283)
T ss_pred EEEeccccCCceEEEEEcCCcc-cCCCCCEEEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCcccc
Confidence 33443 5578899999999732 34578999999999988776643 345667779999999998776210 000
Q ss_pred ------------cCCC---cc----hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 112 ------------VSLG---WH----EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 112 ------------~~~~---~~----~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
.... +. ..+++...++......+.++++|+||||||..|+.++.++|+ ++++++.+|..+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 100 DFGVGAGFYLNATQEKWKNWRMYDYVVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred ccCCCcceeeccccCCCcccchhhhHHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 0000 01 123343344333333455889999999999999999999998 899999988865
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChH-HHHHHHHH-
Q 013268 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNA- 249 (446)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~- 249 (446)
+...... .. ....++......... ....++...+...++|+++++|++|.+++.. .++.+++.
T Consensus 180 ~~~~~~~-~~------------~~~~~~g~~~~~~~~--~d~~~~~~~~~~~~~pvli~~G~~D~~v~~~~~s~~~~~~l 244 (283)
T PLN02442 180 PINCPWG-QK------------AFTNYLGSDKADWEE--YDATELVSKFNDVSATILIDQGEADKFLKEQLLPENFEEAC 244 (283)
T ss_pred cccCchh-hH------------HHHHHcCCChhhHHH--cChhhhhhhccccCCCEEEEECCCCccccccccHHHHHHHH
Confidence 3210000 00 000000000000000 1122333445567899999999999998863 34444444
Q ss_pred --cCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhhcC
Q 013268 250 --YAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 250 --l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L~ 284 (446)
.+.+.++.++++ +|.+..-..+.+....|..+.++
T Consensus 245 ~~~g~~~~~~~~pg~~H~~~~~~~~i~~~~~~~~~~~~ 282 (283)
T PLN02442 245 KEAGAPVTLRLQPGYDHSYFFIATFIDDHINHHAQALK 282 (283)
T ss_pred HHcCCCeEEEEeCCCCccHHHHHHHHHHHHHHHHHHhc
Confidence 345678899998 99866444444555566655543
No 72
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.74 E-value=4.9e-16 Score=148.71 Aligned_cols=227 Identities=15% Similarity=0.204 Sum_probs=140.5
Q ss_pred EEEEEEC-CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH--HHHh-ccCCcEEEEeCC--CCCCCCCCC-
Q 013268 38 QDLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVIL-LPSNITLFTLDF--SGSGLSDGD- 110 (446)
Q Consensus 38 ~~v~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~--~~~L-~~~Gy~Vi~~D~--~G~G~S~~~- 110 (446)
+.+++.+ .-+..+.+.+|.|+... .++.|+|+++||++++...|... ...+ .+.||.|+++|. +|+|.+...
T Consensus 14 ~~~~~~s~~~~~~~~~~v~~P~~~~-~~~~P~vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~ 92 (275)
T TIGR02821 14 GFYRHKSETCGVPMTFGVFLPPQAA-AGPVPVLWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDD 92 (275)
T ss_pred EEEEEeccccCCceEEEEEcCCCcc-CCCCCEEEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcc
Confidence 3444443 45778889999997532 34689999999999988777532 3344 456999999998 555533210
Q ss_pred ----------Cc-------CCCcchHHHH-HHHHHHHHhcC--CCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCc
Q 013268 111 ----------YV-------SLGWHEKDDL-KVVVSYLRGNK--QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (446)
Q Consensus 111 ----------~~-------~~~~~~~~D~-~~~i~~l~~~~--~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~ 169 (446)
.. ...+.....+ .++...+.+.. +.++++++||||||++++.++.++|+ ++++++++|.
T Consensus 93 ~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~ 172 (275)
T TIGR02821 93 AWDFGKGAGFYVDATEEPWSQHYRMYSYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPI 172 (275)
T ss_pred cccccCCccccccCCcCcccccchHHHHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCc
Confidence 00 0011112222 23333444433 34789999999999999999999998 8999998888
Q ss_pred cCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC--CCCCcEEEEEeCCCCCCCh-HHHHHH
Q 013268 170 SDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP--KTFIPALFGHASEDKFIRA-RHSDLI 246 (446)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~i~~PvLii~G~~D~~vp~-~~~~~l 246 (446)
.+.... + .. ...+...+..... .....++...+. ....|+++++|+.|+.++. ..+..+
T Consensus 173 ~~~~~~------------~-~~----~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~plli~~G~~D~~v~~~~~~~~~ 234 (275)
T TIGR02821 173 VAPSRC------------P-WG----QKAFSAYLGADEA-AWRSYDASLLVADGGRHSTILIDQGTADQFLDEQLRPDAF 234 (275)
T ss_pred cCcccC------------c-ch----HHHHHHHhccccc-chhhcchHHHHhhcccCCCeeEeecCCCcccCccccHHHH
Confidence 653210 0 00 0011111110000 000111111111 2457999999999999998 455555
Q ss_pred HHHc---CCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhhc
Q 013268 247 FNAY---AGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 247 ~~~l---~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L 283 (446)
.+.+ ..+.++.+++| +|.+..-..+....++|+.+++
T Consensus 235 ~~~l~~~g~~v~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~ 275 (275)
T TIGR02821 235 EQACRAAGQALTLRRQAGYDHSYYFIASFIADHLRHHAERL 275 (275)
T ss_pred HHHHHHcCCCeEEEEeCCCCccchhHHHhHHHHHHHHHhhC
Confidence 5444 34678889998 9999877777888888887753
No 73
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.74 E-value=3.7e-17 Score=159.70 Aligned_cols=235 Identities=20% Similarity=0.282 Sum_probs=141.2
Q ss_pred ceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH-HHHhccCCcEEEEeCCCCCCCCCCCCc
Q 013268 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA-AVILLPSNITLFTLDFSGSGLSDGDYV 112 (446)
Q Consensus 34 ~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~-~~~L~~~Gy~Vi~~D~~G~G~S~~~~~ 112 (446)
++.-++++++-. |.+|.++++.|. .+++.|+||++.|..+...++..+ .+.|+++|++++++|.||.|.|...+.
T Consensus 162 ~~~i~~v~iP~e-g~~I~g~LhlP~---~~~p~P~VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l 237 (411)
T PF06500_consen 162 DYPIEEVEIPFE-GKTIPGYLHLPS---GEKPYPTVIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPL 237 (411)
T ss_dssp SSEEEEEEEEET-TCEEEEEEEESS---SSS-EEEEEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S
T ss_pred CCCcEEEEEeeC-CcEEEEEEEcCC---CCCCCCEEEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCC
Confidence 334455666644 489999999998 567889999999999998886655 467889999999999999999875443
Q ss_pred CCCcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhC-CCccEEEEeCCcc-CHHHHHHHHHHHHhhhCC
Q 013268 113 SLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAED-PSIAGMVLDSAFS-DLFDLMLELVDVYKIRLP 188 (446)
Q Consensus 113 ~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~-p~v~~lVl~sp~~-~~~~~~~~~~~~~~~~~~ 188 (446)
.... -.-..++++||.+...+ .+|+++|.|+||++|+++|..+ ++++++|..++.. .+...... ....|
T Consensus 238 ~~D~--~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~-----~~~~P 310 (411)
T PF06500_consen 238 TQDS--SRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEW-----QQRVP 310 (411)
T ss_dssp -S-C--CHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHH-----HTTS-
T ss_pred CcCH--HHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHH-----HhcCC
Confidence 3322 23467889999988766 6999999999999999999866 5599999988864 33221110 11222
Q ss_pred chhHHHHHHHH-------HHHHhhhhcccccccchhhhC--CCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEe
Q 013268 189 KFTVKMAVQYM-------RRVIQKKAKFDIMDLNCLKLA--PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKF 259 (446)
Q Consensus 189 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~ 259 (446)
......+...+ .........+.+... ..+ .+..+|+|.+.|++|+++|.+..+.+...-.+ .+...+
T Consensus 311 ~my~d~LA~rlG~~~~~~~~l~~el~~~SLk~q---GlL~~rr~~~plL~i~~~~D~v~P~eD~~lia~~s~~-gk~~~~ 386 (411)
T PF06500_consen 311 DMYLDVLASRLGMAAVSDESLRGELNKFSLKTQ---GLLSGRRCPTPLLAINGEDDPVSPIEDSRLIAESSTD-GKALRI 386 (411)
T ss_dssp HHHHHHHHHHCT-SCE-HHHHHHHGGGGSTTTT---TTTTSS-BSS-EEEEEETT-SSS-HHHHHHHHHTBTT--EEEEE
T ss_pred HHHHHHHHHHhCCccCCHHHHHHHHHhcCcchh---ccccCCCCCcceEEeecCCCCCCCHHHHHHHHhcCCC-Cceeec
Confidence 22111111100 000111112222111 123 67889999999999999999998888776544 445555
Q ss_pred CCCCCCCChhHHHHHHHHHHHhhc
Q 013268 260 DGDHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 260 ~ggH~~~~~~~~~~~i~~Fl~~~L 283 (446)
+.+=.....+.....+.+||++.|
T Consensus 387 ~~~~~~~gy~~al~~~~~Wl~~~l 410 (411)
T PF06500_consen 387 PSKPLHMGYPQALDEIYKWLEDKL 410 (411)
T ss_dssp -SSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccchHHHHHHHHHHHHHhc
Confidence 542111222456778889998765
No 74
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.73 E-value=2.1e-16 Score=136.32 Aligned_cols=193 Identities=20% Similarity=0.281 Sum_probs=146.5
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCC---CCh--hhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCR--ADANEAAVILLPSNITLFTLDFSGSGLSDGDYV 112 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g---~~~--~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~ 112 (446)
.++.+....| .+.++ |.|. .....|+.|++|.-+ |+. .....++..|.++||.++.+|+||-|.|.|.+.
T Consensus 5 ~~v~i~Gp~G-~le~~-~~~~---~~~~~~iAli~HPHPl~gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD 79 (210)
T COG2945 5 PTVIINGPAG-RLEGR-YEPA---KTPAAPIALICHPHPLFGGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFD 79 (210)
T ss_pred CcEEecCCcc-cceec-cCCC---CCCCCceEEecCCCccccCccCCHHHHHHHHHHHhCCceEEeecccccccccCccc
Confidence 4555655555 34443 4443 346789999999775 332 234566788999999999999999999998865
Q ss_pred CCCcchHHHHHHHHHHHHhcCCCCcE-EEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchh
Q 013268 113 SLGWHEKDDLKVVVSYLRGNKQTSRI-GLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (446)
Q Consensus 113 ~~~~~~~~D~~~~i~~l~~~~~~~~i-~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~ 191 (446)
.+..+.+|..++++|++.+....+. .+.|+|+|+++++.+|.+.|+....+...|..+.++.
T Consensus 80 -~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~la~r~~e~~~~is~~p~~~~~df---------------- 142 (210)
T COG2945 80 -NGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQLAMRRPEILVFISILPPINAYDF---------------- 142 (210)
T ss_pred -CCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHHHHhcccccceeeccCCCCchhh----------------
Confidence 4557799999999999998766554 7899999999999999999998888877777652110
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC-Chh
Q 013268 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS-RPQ 269 (446)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~-~~~ 269 (446)
..+.-..+|.++|+|+.|.++++....+..+.. ..+++.+++ +|++. .-.
T Consensus 143 --------------------------s~l~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~--~~~~i~i~~a~HFF~gKl~ 194 (210)
T COG2945 143 --------------------------SFLAPCPSPGLVIQGDADDVVDLVAVLKWQESI--KITVITIPGADHFFHGKLI 194 (210)
T ss_pred --------------------------hhccCCCCCceeEecChhhhhcHHHHHHhhcCC--CCceEEecCCCceecccHH
Confidence 123345579999999999999999888877763 344566666 99998 667
Q ss_pred HHHHHHHHHHH
Q 013268 270 FYYDSVSIFFY 280 (446)
Q Consensus 270 ~~~~~i~~Fl~ 280 (446)
.+.+.+.+|+.
T Consensus 195 ~l~~~i~~~l~ 205 (210)
T COG2945 195 ELRDTIADFLE 205 (210)
T ss_pred HHHHHHHHHhh
Confidence 88888889884
No 75
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.73 E-value=5.2e-16 Score=144.35 Aligned_cols=201 Identities=22% Similarity=0.261 Sum_probs=155.5
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCC-CCCCCCC-----
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDY----- 111 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~-G~S~~~~----- 111 (446)
+++.+...+ ..+.+++..|. ...+.|.||++|+..|-......+++.|+..||.|+++|+-+. |.+....
T Consensus 3 ~~v~~~~~~-~~~~~~~a~P~---~~~~~P~VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~ 78 (236)
T COG0412 3 TDVTIPAPD-GELPAYLARPA---GAGGFPGVIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAE 78 (236)
T ss_pred cceEeeCCC-ceEeEEEecCC---cCCCCCEEEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHH
Confidence 456677666 89999999997 4445599999999999988999999999999999999999863 2222111
Q ss_pred -cC-----CC-cchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHH
Q 013268 112 -VS-----LG-WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDV 182 (446)
Q Consensus 112 -~~-----~~-~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~ 182 (446)
.. .. .....|+.++++||..+... .+|+++|+||||.+++.++...|++++.+...|....
T Consensus 79 ~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~~v~a~v~fyg~~~~---------- 148 (236)
T COG0412 79 LETGLVERVDPAEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAPEVKAAVAFYGGLIA---------- 148 (236)
T ss_pred HhhhhhccCCHHHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccCCccEEEEecCCCCC----------
Confidence 00 11 12378999999999988633 7899999999999999999999999999976554321
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC---CcEEEEe
Q 013268 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKF 259 (446)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~~~~~ 259 (446)
.......++++|+|+..|+.|..+|......+.+.+.. ..++.++
T Consensus 149 --------------------------------~~~~~~~~~~~pvl~~~~~~D~~~p~~~~~~~~~~~~~~~~~~~~~~y 196 (236)
T COG0412 149 --------------------------------DDTADAPKIKVPVLLHLAGEDPYIPAADVDALAAALEDAGVKVDLEIY 196 (236)
T ss_pred --------------------------------CcccccccccCcEEEEecccCCCCChhHHHHHHHHHHhcCCCeeEEEe
Confidence 01122457889999999999999999988888887763 4678899
Q ss_pred CC-CCCCCCh-------------hHHHHHHHHHHHhhcC
Q 013268 260 DG-DHNSSRP-------------QFYYDSVSIFFYNVLH 284 (446)
Q Consensus 260 ~g-gH~~~~~-------------~~~~~~i~~Fl~~~L~ 284 (446)
++ .|.+.++ +..++++.+||.+++.
T Consensus 197 ~ga~H~F~~~~~~~~~~y~~~aa~~a~~~~~~ff~~~~~ 235 (236)
T COG0412 197 PGAGHGFANDRADYHPGYDAAAAEDAWQRVLAFFKRLLG 235 (236)
T ss_pred CCCccccccCCCcccccCCHHHHHHHHHHHHHHHHHhcc
Confidence 98 6876632 3567888999998875
No 76
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.73 E-value=4.4e-17 Score=140.96 Aligned_cols=228 Identities=17% Similarity=0.181 Sum_probs=149.9
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCC-ChhhHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcch-HHH
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-CRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHE-KDD 121 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~-~~~~~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~~~~~~-~~D 121 (446)
.+|.+|.+.-+ +. ....|+++.|.-| ...+|......+.+. .++|+++|-||+|.|..+...+..+. .+|
T Consensus 28 vng~ql~y~~~------G~-G~~~iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~D 100 (277)
T KOG2984|consen 28 VNGTQLGYCKY------GH-GPNYILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKD 100 (277)
T ss_pred ecCceeeeeec------CC-CCceeEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHh
Confidence 36788887654 22 3345677777655 455677666555444 49999999999999987666555432 567
Q ss_pred HHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHH---HH-------HHHHHHhhhCC-c
Q 013268 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDL---ML-------ELVDVYKIRLP-K 189 (446)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~---~~-------~~~~~~~~~~~-~ 189 (446)
...+++.++.. ...++.++|+|-||..|+.+|+++++ |..+|+.++...+... .. .+....+..+. .
T Consensus 101 a~~avdLM~aL-k~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~e~~ 179 (277)
T KOG2984|consen 101 AEYAVDLMEAL-KLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPYEDH 179 (277)
T ss_pred HHHHHHHHHHh-CCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchHHHh
Confidence 77777766554 67899999999999999999999999 9999988765543221 11 11111111000 0
Q ss_pred hhHHHHHHHHHHHHhhhh-cccccccc-hhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeC-CCCCCC
Q 013268 190 FTVKMAVQYMRRVIQKKA-KFDIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFD-GDHNSS 266 (446)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~-ggH~~~ 266 (446)
+......+....+..... .....+-+ +...+++++||+||+||++|++++..++--+....+.. ++.+++ |+|++.
T Consensus 180 Yg~e~f~~~wa~wvD~v~qf~~~~dG~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi~~~~~~a-~~~~~peGkHn~h 258 (277)
T KOG2984|consen 180 YGPETFRTQWAAWVDVVDQFHSFCDGRFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFIPVLKSLA-KVEIHPEGKHNFH 258 (277)
T ss_pred cCHHHHHHHHHHHHHHHHHHhhcCCCchHhhhcccccCCeeEeeCCcCCCCCCCCccchhhhcccc-eEEEccCCCccee
Confidence 111112222222221111 11121212 44568899999999999999999988887777766644 455555 699987
Q ss_pred --ChhHHHHHHHHHHHh
Q 013268 267 --RPQFYYDSVSIFFYN 281 (446)
Q Consensus 267 --~~~~~~~~i~~Fl~~ 281 (446)
+++++...+.+||++
T Consensus 259 Lrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 259 LRYAKEFNKLVLDFLKS 275 (277)
T ss_pred eechHHHHHHHHHHHhc
Confidence 899999999999975
No 77
>PRK11460 putative hydrolase; Provisional
Probab=99.73 E-value=3.7e-16 Score=145.58 Aligned_cols=177 Identities=15% Similarity=0.130 Sum_probs=123.6
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCC-----Cc--CCCc-c-------hHHHHHHHH
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD-----YV--SLGW-H-------EKDDLKVVV 126 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~-----~~--~~~~-~-------~~~D~~~~i 126 (446)
...+.|+||++||+|++...|..++..|...++.+..++.+|....... +. .... . ..+.+.+.+
T Consensus 12 ~~~~~~~vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i 91 (232)
T PRK11460 12 DKPAQQLLLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETV 91 (232)
T ss_pred CCCCCcEEEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHH
Confidence 3456799999999999999999999999877665556666654322110 00 0000 0 022344555
Q ss_pred HHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHH
Q 013268 127 SYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVI 203 (446)
Q Consensus 127 ~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (446)
+++.++.+. ++|+++|||+||.+++.++..+|+ +.++|..++... ..+
T Consensus 92 ~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~-----------------~~~------------ 142 (232)
T PRK11460 92 RYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA-----------------SLP------------ 142 (232)
T ss_pred HHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc-----------------ccc------------
Confidence 666555544 689999999999999999999888 566776655311 000
Q ss_pred hhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-CCCCCChhHHHHHHHHHH
Q 013268 204 QKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFF 279 (446)
Q Consensus 204 ~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl 279 (446)
.......|++++||++|++||++.++++.+.+. ...+++++++ ||... .+..+.+.+||
T Consensus 143 ---------------~~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L~~~g~~~~~~~~~~~gH~i~--~~~~~~~~~~l 205 (232)
T PRK11460 143 ---------------ETAPTATTIHLIHGGEDPVIDVAHAVAAQEALISLGGDVTLDIVEDLGHAID--PRLMQFALDRL 205 (232)
T ss_pred ---------------ccccCCCcEEEEecCCCCccCHHHHHHHHHHHHHCCCCeEEEEECCCCCCCC--HHHHHHHHHHH
Confidence 001235799999999999999999999888775 3457788887 99976 45667788888
Q ss_pred HhhcC
Q 013268 280 YNVLH 284 (446)
Q Consensus 280 ~~~L~ 284 (446)
.+.+.
T Consensus 206 ~~~l~ 210 (232)
T PRK11460 206 RYTVP 210 (232)
T ss_pred HHHcc
Confidence 88874
No 78
>PLN00021 chlorophyllase
Probab=99.72 E-value=7.2e-16 Score=149.23 Aligned_cols=219 Identities=14% Similarity=0.104 Sum_probs=149.3
Q ss_pred cccCCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCC
Q 013268 28 FMLAGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS 107 (446)
Q Consensus 28 ~~~~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S 107 (446)
|..........++.+.+.....+.+.+|.|. ..+..|+|||+||++.+...|..+++.|+++||.|+++|++|++..
T Consensus 17 ~~~g~~~~~~~~~~~~~~~~~~~p~~v~~P~---~~g~~PvVv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~ 93 (313)
T PLN00021 17 FETGKFPVELITVDESSRPSPPKPLLVATPS---EAGTYPVLLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGP 93 (313)
T ss_pred cccCCceeEEEEecCCCcCCCCceEEEEeCC---CCCCCCEEEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCC
Confidence 3333344445555554444567888899997 4577899999999999988899999999999999999999986432
Q ss_pred CCCCcCCCcchHHHHHHHHHHHHhc----------CCCCcEEEEEechhHHHHHHHHHhCCC------ccEEEEeCCccC
Q 013268 108 DGDYVSLGWHEKDDLKVVVSYLRGN----------KQTSRIGLWGRSMGAVTSLLYGAEDPS------IAGMVLDSAFSD 171 (446)
Q Consensus 108 ~~~~~~~~~~~~~D~~~~i~~l~~~----------~~~~~i~lvG~S~GG~ial~~a~~~p~------v~~lVl~sp~~~ 171 (446)
. .....++..++++|+.+. .+.++++++||||||.+++.+|..+++ ++++|++.|...
T Consensus 94 ~------~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 94 D------GTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred C------chhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 1 112356777788888753 223789999999999999999998863 788998888654
Q ss_pred HHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCC-----C----CChH-
Q 013268 172 LFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK-----F----IRAR- 241 (446)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~-----~----vp~~- 241 (446)
..... ...|.. . .......++.+|+|++.+..|. . .|..
T Consensus 168 ~~~~~--------~~~p~i------------------l-----~~~~~s~~~~~P~liig~g~~~~~~~~~~p~~ap~~~ 216 (313)
T PLN00021 168 TSKGK--------QTPPPV------------------L-----TYAPHSFNLDIPVLVIGTGLGGEPRNPLFPPCAPDGV 216 (313)
T ss_pred ccccc--------CCCCcc------------------c-----ccCcccccCCCCeEEEecCCCcccccccccccCCCCC
Confidence 21100 000100 0 0001222377999999999763 2 2243
Q ss_pred HHHHHHHHcCCCcEEEEeCC-CCCCC---C----------------------hhHHHHHHHHHHHhhcCCC
Q 013268 242 HSDLIFNAYAGDKNIIKFDG-DHNSS---R----------------------PQFYYDSVSIFFYNVLHPP 286 (446)
Q Consensus 242 ~~~~l~~~l~~~~~~~~~~g-gH~~~---~----------------------~~~~~~~i~~Fl~~~L~~~ 286 (446)
+-.++++.++.++.+.+.++ ||+.. . .+.+...+..||..+|.++
T Consensus 217 ~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~c~~g~~~~~~r~~~~g~~~aFl~~~l~~~ 287 (313)
T PLN00021 217 NHAEFFNECKAPAVHFVAKDYGHMDMLDDDTSGIRGKITGCMCKNGKPRKPMRRFVGGAVVAFLKAYLEGD 287 (313)
T ss_pred CHHHHHHhcCCCeeeeeecCCCcceeecCCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHhcCc
Confidence 34788888887777777776 99854 1 0133446778998888754
No 79
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.71 E-value=3.1e-16 Score=144.26 Aligned_cols=180 Identities=14% Similarity=0.088 Sum_probs=117.4
Q ss_pred EEEecCCCCCCCCCcEEEEECCCCCChhhHH---HHHHHhccCCcEEEEeCCCCCCCCCCCCc-------CCCcchHHHH
Q 013268 53 SHYMPSPFPEDTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFSGSGLSDGDYV-------SLGWHEKDDL 122 (446)
Q Consensus 53 ~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~---~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~-------~~~~~~~~D~ 122 (446)
++|+|++ ..++.|+||++||++++...+. .+...+.+.||.|+++|++|++.+..... .....+..++
T Consensus 2 ~ly~P~~--~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (212)
T TIGR01840 2 YVYVPAG--LTGPRALVLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESL 79 (212)
T ss_pred EEEcCCC--CCCCCCEEEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHH
Confidence 5788875 2457899999999998877664 34455556799999999999875432110 0111346788
Q ss_pred HHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH-HHHHHHHHHhhhCCchhHHHHHHH
Q 013268 123 KVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD-LMLELVDVYKIRLPKFTVKMAVQY 198 (446)
Q Consensus 123 ~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 198 (446)
..+++++.++..+ ++|+|+|||+||.+++.++..+|+ +++++.+++...... ......... ..+.. .......
T Consensus 80 ~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~-~~~~~~~ 156 (212)
T TIGR01840 80 HQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPYGEASSSISATPQM--CTAAT-AASVCRL 156 (212)
T ss_pred HHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcccccccchhhHhhc--CCCCC-HHHHHHH
Confidence 8999999887655 689999999999999999999998 888887776542111 000000000 00000 0111111
Q ss_pred HHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC
Q 013268 199 MRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (446)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (446)
.... .........|++++||.+|.+||++.++.+.+.+.
T Consensus 157 ~~~~--------------~~~~~~~~p~~~i~hG~~D~vVp~~~~~~~~~~l~ 195 (212)
T TIGR01840 157 VRGM--------------QSEYNGPTPIMSVVHGDADYTVLPGNADEIRDAML 195 (212)
T ss_pred Hhcc--------------CCcccCCCCeEEEEEcCCCceeCcchHHHHHHHHH
Confidence 1100 01122334567899999999999999999888765
No 80
>PRK10162 acetyl esterase; Provisional
Probab=99.70 E-value=2.2e-15 Score=147.10 Aligned_cols=235 Identities=18% Similarity=0.221 Sum_probs=149.4
Q ss_pred eeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCC---CChhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCC
Q 013268 35 YKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 35 ~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g---~~~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~ 110 (446)
...+++.+...+| .+.+++|.|.. ...|+||++||++ ++...+..++..|+. .|+.|+.+|||......
T Consensus 55 ~~~~~~~i~~~~g-~i~~~~y~P~~----~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~-- 127 (318)
T PRK10162 55 MATRAYMVPTPYG-QVETRLYYPQP----DSQATLFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEAR-- 127 (318)
T ss_pred ceEEEEEEecCCC-ceEEEEECCCC----CCCCEEEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCC--
Confidence 3467788887777 58899999852 3469999999988 555667777888877 49999999999654321
Q ss_pred CcCCCcchHHHHHHHHHHHHhc---CCC--CcEEEEEechhHHHHHHHHHhC-------CCccEEEEeCCccCHHHHHHH
Q 013268 111 YVSLGWHEKDDLKVVVSYLRGN---KQT--SRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLE 178 (446)
Q Consensus 111 ~~~~~~~~~~D~~~~i~~l~~~---~~~--~~i~lvG~S~GG~ial~~a~~~-------p~v~~lVl~sp~~~~~~~~~~ 178 (446)
.. ...+|+.++++|+.++ ++. ++|+|+|+|+||.+++.++... +.++++|+++|..+..+...
T Consensus 128 -~p---~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~~~~~s- 202 (318)
T PRK10162 128 -FP---QAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVS- 202 (318)
T ss_pred -CC---CcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCCCCChh-
Confidence 11 2378999999998764 333 6999999999999999888642 23899999998776432110
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchh-hhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCc
Q 013268 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCL-KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDK 254 (446)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~ 254 (446)
..........+.......+................++. ..+.+.-.|++|++|+.|++.+ .+..+.+++. ..+
T Consensus 203 -~~~~~~~~~~l~~~~~~~~~~~y~~~~~~~~~p~~~p~~~~l~~~lPp~~i~~g~~D~L~d--e~~~~~~~L~~aGv~v 279 (318)
T PRK10162 203 -RRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYYCLFNNDLTRDVPPCFIAGAEFDPLLD--DSRLLYQTLAAHQQPC 279 (318)
T ss_pred -HHHhCCCccccCHHHHHHHHHHhCCCccccCCcccCcchhhhhcCCCCeEEEecCCCcCcC--hHHHHHHHHHHcCCCE
Confidence 11111111112222222222222111100000000110 1121223599999999999864 5666666654 467
Q ss_pred EEEEeCC-CCCCC-------ChhHHHHHHHHHHHhhcC
Q 013268 255 NIIKFDG-DHNSS-------RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 255 ~~~~~~g-gH~~~-------~~~~~~~~i~~Fl~~~L~ 284 (446)
++++++| .|.+. ...+..+.+.+||.+.++
T Consensus 280 ~~~~~~g~~H~f~~~~~~~~~a~~~~~~~~~~l~~~~~ 317 (318)
T PRK10162 280 EFKLYPGTLHAFLHYSRMMDTADDALRDGAQFFTAQLK 317 (318)
T ss_pred EEEEECCCceehhhccCchHHHHHHHHHHHHHHHHHhc
Confidence 8999999 89754 134677788899988765
No 81
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.70 E-value=2e-15 Score=150.48 Aligned_cols=231 Identities=10% Similarity=0.043 Sum_probs=145.9
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-------------HHHHH---HHhccCCcEEEEeCCCCCCCCCCC
Q 013268 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-------------ANEAA---VILLPSNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-------------~~~~~---~~L~~~Gy~Vi~~D~~G~G~S~~~ 110 (446)
..+|.|..|... ...+.++||++|++.++... |..++ ..+-...|-||++|..|-|.|..+
T Consensus 40 ~~~~~Y~t~G~l---n~~~~n~vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p 116 (389)
T PRK06765 40 DVQMGYETYGTL---NRAKSNVILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDP 116 (389)
T ss_pred CceEEEEecccc---CCCCCCEEEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCC
Confidence 456777777543 33456999999999986432 33332 234344699999999998753211
Q ss_pred -----------C-----c--CCCcchHHHHHHHHHHHHhcCCCCcEE-EEEechhHHHHHHHHHhCCC-ccEEEEeCCcc
Q 013268 111 -----------Y-----V--SLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (446)
Q Consensus 111 -----------~-----~--~~~~~~~~D~~~~i~~l~~~~~~~~i~-lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~ 170 (446)
+ . .+....++|+.+.+..+.+..++.++. ++||||||++++.+|.++|+ |+++|++++..
T Consensus 117 ~~g~tgp~s~~p~tg~~~~~~fP~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~ 196 (389)
T PRK06765 117 NVITTGPASINPKTGKPYGMDFPVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNP 196 (389)
T ss_pred CCCCCCCCCCCcCCCCccCCCCCcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCC
Confidence 0 0 122234777777777777777888886 99999999999999999999 99999986543
Q ss_pred CHHH-----HHHHHHHHHhhhC-------------CchhHHHH-------------------------------------
Q 013268 171 DLFD-----LMLELVDVYKIRL-------------PKFTVKMA------------------------------------- 195 (446)
Q Consensus 171 ~~~~-----~~~~~~~~~~~~~-------------~~~~~~~~------------------------------------- 195 (446)
.... .......... .. |.......
T Consensus 197 ~~~~~~~~~~~~~~~~ai~-~dp~~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~ 275 (389)
T PRK06765 197 QNDAWTSVNVLQNWAEAIR-LDPNWKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTS 275 (389)
T ss_pred CCChhHHHHHHHHHHHHHH-hCCCCCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhh
Confidence 2211 1111111000 00 00000000
Q ss_pred -HHHHHHHH----------------hhhhccccc--ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC---C
Q 013268 196 -VQYMRRVI----------------QKKAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---D 253 (446)
Q Consensus 196 -~~~~~~~~----------------~~~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~ 253 (446)
..++.... .....++.. ..+....+.++++|+|+|+|+.|.++|++.++.+.+.++. +
T Consensus 276 ~e~yl~~~~~~~~~~~Dan~~l~l~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~ 355 (389)
T PRK06765 276 FEKEINKATYRRAELVDANHWLYLAKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKY 355 (389)
T ss_pred HHHHHHHHHHHhhhccChhhHHHHHHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCC
Confidence 00000000 000000000 0034556778999999999999999999999999988863 5
Q ss_pred cEEEEeCC--CCCCC--ChhHHHHHHHHHHHh
Q 013268 254 KNIIKFDG--DHNSS--RPQFYYDSVSIFFYN 281 (446)
Q Consensus 254 ~~~~~~~g--gH~~~--~~~~~~~~i~~Fl~~ 281 (446)
.+++++++ ||... +++.+.+.|.+||++
T Consensus 356 a~l~~I~s~~GH~~~le~p~~~~~~I~~FL~~ 387 (389)
T PRK06765 356 AEVYEIESINGHMAGVFDIHLFEKKIYEFLNR 387 (389)
T ss_pred eEEEEECCCCCcchhhcCHHHHHHHHHHHHcc
Confidence 67888863 99866 788999999999865
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.67 E-value=5.1e-15 Score=151.78 Aligned_cols=215 Identities=13% Similarity=0.081 Sum_probs=137.7
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHH-----HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHH
Q 013268 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-----EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDL 122 (446)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~-----~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~ 122 (446)
..+..+.|.|.. .....++||++||+......+. .++++|+++||+|+++|++|+|.+........ ...+++
T Consensus 172 ~~~eLi~Y~P~t--~~~~~~PlLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~dd-Y~~~~i 248 (532)
T TIGR01838 172 ELFQLIQYEPTT--ETVHKTPLLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDD-YIRDGV 248 (532)
T ss_pred CcEEEEEeCCCC--CcCCCCcEEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhh-hHHHHH
Confidence 345666777763 2336788999999976655543 68999999999999999999998865433222 224568
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHH----HHHHhC-CC-ccEEEEeCCccCHHH--------------HHHHHHHH
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSL----LYGAED-PS-IAGMVLDSAFSDLFD--------------LMLELVDV 182 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial----~~a~~~-p~-v~~lVl~sp~~~~~~--------------~~~~~~~~ 182 (446)
.++++.+++..+.++++++||||||.++. .+++.. ++ |++++++++..++.. .+......
T Consensus 249 ~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~~~~~~e~~~~~ 328 (532)
T TIGR01838 249 IAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEEIVAGIERQNGG 328 (532)
T ss_pred HHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCchhHHHHHHHHHh
Confidence 88999999888889999999999999852 245554 55 999998876554221 01111111
Q ss_pred HhhhCC--------------------------------------------chhHHHHHHHHHHHHhhhhcc--cccccch
Q 013268 183 YKIRLP--------------------------------------------KFTVKMAVQYMRRVIQKKAKF--DIMDLNC 216 (446)
Q Consensus 183 ~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 216 (446)
.+ .+| .++.....++++.+....... ...-.+.
T Consensus 329 ~G-~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~t~lP~~~~~~~lr~ly~~N~L~~G~~~v~g~ 407 (532)
T TIGR01838 329 GG-YLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDSTNLPGKMHNFYLRNLYLQNALTTGGLEVCGV 407 (532)
T ss_pred cC-CCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccCccchHHHHHHHHHHHHhcCCCcCCeeEECCE
Confidence 00 011 111111112222221111100 0000123
Q ss_pred hhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC
Q 013268 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS 266 (446)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~ 266 (446)
...+.+|++|+|+++|++|.++|++.+..+.+.+++...+++.++||...
T Consensus 408 ~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ 457 (532)
T TIGR01838 408 RLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAG 457 (532)
T ss_pred ecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchH
Confidence 34677899999999999999999999999999988655444434599854
No 83
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.67 E-value=3.8e-15 Score=140.06 Aligned_cols=220 Identities=19% Similarity=0.191 Sum_probs=143.5
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEE
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 140 (446)
.-...|+++++||+.|+...|..+...|+.. +-.|+++|.|.||.|............+|+...++.........++.+
T Consensus 48 ~~~~~Pp~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l 127 (315)
T KOG2382|consen 48 NLERAPPAIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVL 127 (315)
T ss_pred ccCCCCceEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCcee
Confidence 4467899999999999999999999999876 789999999999999865443322236778888887765556689999
Q ss_pred EEechhH-HHHHHHHHhCCC-c-cEEEEeCCccC---HHHHHHHHHHHHhhhCCc----hhHHH-------------HHH
Q 013268 141 WGRSMGA-VTSLLYGAEDPS-I-AGMVLDSAFSD---LFDLMLELVDVYKIRLPK----FTVKM-------------AVQ 197 (446)
Q Consensus 141 vG~S~GG-~ial~~a~~~p~-v-~~lVl~sp~~~---~~~~~~~~~~~~~~~~~~----~~~~~-------------~~~ 197 (446)
+|||||| .+++..+...|. + +.+|...++.. ......+........... ...+. ..+
T Consensus 128 ~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~d~~~~~~~~rke~~~~l~~~~~d~~~~~ 207 (315)
T KOG2382|consen 128 LGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQLDLSIGVSRGRKEALKSLIEVGFDNLVRQ 207 (315)
T ss_pred cccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhccccccccccHHHHHHHHHHHhcchHHHH
Confidence 9999999 777777788887 4 45555433311 111111111111100000 00011 111
Q ss_pred HHHHHHhh--hhc-c-ccc-------------ccchhhhC--CCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEE
Q 013268 198 YMRRVIQK--KAK-F-DIM-------------DLNCLKLA--PKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK 258 (446)
Q Consensus 198 ~~~~~~~~--~~~-~-~~~-------------~~~~~~~l--~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~ 258 (446)
++...+.. ... + +.. ..+....+ .....|||+++|.++.+++.++-.++.+.++. .++..
T Consensus 208 fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~~~~~~~pvlfi~g~~S~fv~~~~~~~~~~~fp~-~e~~~ 286 (315)
T KOG2382|consen 208 FILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLEDGPYTGPVLFIKGLQSKFVPDEHYPRMEKIFPN-VEVHE 286 (315)
T ss_pred HHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhcccccccccccccceeEEecCCCCCcChhHHHHHHHhccc-hheee
Confidence 11111110 000 0 000 00111112 44578999999999999999988888887774 77888
Q ss_pred eC-CCCCCC--ChhHHHHHHHHHHHhh
Q 013268 259 FD-GDHNSS--RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 259 ~~-ggH~~~--~~~~~~~~i~~Fl~~~ 282 (446)
++ +||+.. .|+++.+.|.+|+.++
T Consensus 287 ld~aGHwVh~E~P~~~~~~i~~Fl~~~ 313 (315)
T KOG2382|consen 287 LDEAGHWVHLEKPEEFIESISEFLEEP 313 (315)
T ss_pred cccCCceeecCCHHHHHHHHHHHhccc
Confidence 88 699977 8999999999998765
No 84
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.65 E-value=2.9e-15 Score=138.29 Aligned_cols=181 Identities=18% Similarity=0.199 Sum_probs=118.2
Q ss_pred cEEEEeCCCCCCCCCC--CCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCcc
Q 013268 94 ITLFTLDFSGSGLSDG--DYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (446)
Q Consensus 94 y~Vi~~D~~G~G~S~~--~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~ 170 (446)
|+|+++|+||+|.|+. ...... ...+|+.+.++.+++..+.++++++||||||.+++.+|+.+|+ |+++|+++++.
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~ 79 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPD-YTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPP 79 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCT-HCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESS
T ss_pred CEEEEEeCCCCCCCCCCccCCccc-ccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeec
Confidence 7899999999999994 122222 3378999999999999899889999999999999999999999 99999999861
Q ss_pred ----CH-----HH-HHHHHHH----H-HhhhCCchhHHHH---------------HHHH-HHHHh------hhhc-----
Q 013268 171 ----DL-----FD-LMLELVD----V-YKIRLPKFTVKMA---------------VQYM-RRVIQ------KKAK----- 208 (446)
Q Consensus 171 ----~~-----~~-~~~~~~~----~-~~~~~~~~~~~~~---------------~~~~-~~~~~------~~~~----- 208 (446)
.. .. ....... . ............. .... ..... ....
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (230)
T PF00561_consen 80 DLPDGLWNRIWPRGNLQGQLLDNFFNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNAL 159 (230)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred cchhhhhHHHHhhhhhhhhHHHhhhccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccc
Confidence 00 00 0000000 0 0000000000000 0000 00000 0000
Q ss_pred ccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHH
Q 013268 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVS 276 (446)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~ 276 (446)
......+....+.++++|+|+++|++|.++|++.+..+.+.+++ .+++++++ ||+.. .++++.+.|.
T Consensus 160 ~~~~~~~~~~~l~~i~~p~l~i~~~~D~~~p~~~~~~~~~~~~~-~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 160 GYFSVWDPSPALSNIKVPTLIIWGEDDPLVPPESSEQLAKLIPN-SQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp HHHHHHHHHHHHTTTTSEEEEEEETTCSSSHHHHHHHHHHHSTT-EEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred cccccccccccccccCCCeEEEEeCCCCCCCHHHHHHHHHhcCC-CEEEECCCCChHHHhcCHHhhhhhhc
Confidence 00111233456778999999999999999999999998888875 67888888 99966 6777766553
No 85
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.61 E-value=2.7e-13 Score=124.80 Aligned_cols=212 Identities=18% Similarity=0.272 Sum_probs=137.9
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG 115 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~ 115 (446)
-++.+.+...+|..+....-.-...+.+.+..+||-+||.+|+..++..+...|.+.|+++|.+++||+|.+.+.+...
T Consensus 5 ~~~~~k~~~~~~~~~~~~a~y~D~~~~gs~~gTVv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~- 83 (297)
T PF06342_consen 5 VRKLVKFQAENGKIVTVQAVYEDSLPSGSPLGTVVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQ- 83 (297)
T ss_pred EEEEEEcccccCceEEEEEEEEecCCCCCCceeEEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccc-
Confidence 3456777777776665554333333355566799999999999999999999999999999999999999998755432
Q ss_pred cchHHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccC-----HHH--HHHHHHHHHhhhC
Q 013268 116 WHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSD-----LFD--LMLELVDVYKIRL 187 (446)
Q Consensus 116 ~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~-----~~~--~~~~~~~~~~~~~ 187 (446)
+. -.+-...++.+.+.+++ ++++++|||.|+-.|+.++..+| ..++++++|..- +.. .+. ........+
T Consensus 84 ~~-n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~-~~g~~lin~~G~r~HkgIrp~~r~~-~i~~l~~~l 160 (297)
T PF06342_consen 84 YT-NEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP-LHGLVLINPPGLRPHKGIRPLSRME-TINYLYDLL 160 (297)
T ss_pred cC-hHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc-cceEEEecCCccccccCcCHHHHHH-HHHHHHHHh
Confidence 12 34444555556566576 88999999999999999999997 678998887541 111 111 111111123
Q ss_pred CchhHHHHHHHHHHHHh--------------hhhccccc-ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC
Q 013268 188 PKFTVKMAVQYMRRVIQ--------------KKAKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (446)
Q Consensus 188 ~~~~~~~~~~~~~~~~~--------------~~~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (446)
|.+........+-+.+. .....++. ....+..+.+-++|+|+++|.+|.+|.-+-+.++...+.
T Consensus 161 p~~~~~~i~~~~y~~iG~KV~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~ikvli~ygg~DhLIEeeI~~E~a~~f~ 239 (297)
T PF06342_consen 161 PRFIINAIMYFYYRMIGFKVSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKPIKVLIAYGGKDHLIEEEISFEFAMKFK 239 (297)
T ss_pred hHHHHHHHHHHHHHHhCeeecChHHHHHHHHHHHhcCHHHHHHHHHHhccCCCcEEEEEcCcchhhHHHHHHHHHHHhC
Confidence 33322222211111110 00011110 123345566667999999999999998887777766654
No 86
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.61 E-value=4.8e-14 Score=157.43 Aligned_cols=231 Identities=14% Similarity=0.135 Sum_probs=138.1
Q ss_pred EEEEEEEecCCCCC--CCCCcEEEEECCCCCChhhHHHH-----HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHH
Q 013268 49 VLQCSHYMPSPFPE--DTPLPCVVYCHGNSGCRADANEA-----AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD 121 (446)
Q Consensus 49 ~L~~~~~~P~~~~~--~~~~p~VVllHG~g~~~~~~~~~-----~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D 121 (446)
.+..+.|.|..... ....|+||++||++.+...|... +..|.++||+|+++|+ |.++...........++
T Consensus 48 ~~~l~~y~~~~~~~~~~~~~~plllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~ 124 (994)
T PRK07868 48 MYRLRRYFPPDNRPGQPPVGPPVLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADH 124 (994)
T ss_pred cEEEEEeCCCCccccccCCCCcEEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHH
Confidence 44555777753211 23568999999999988888754 7889999999999995 55543221111121233
Q ss_pred H---HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC-CC-ccEEEEeCCccCHH-----HHHHH------------H
Q 013268 122 L---KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-PS-IAGMVLDSAFSDLF-----DLMLE------------L 179 (446)
Q Consensus 122 ~---~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~-p~-v~~lVl~sp~~~~~-----~~~~~------------~ 179 (446)
+ .++++.++.. ..++++++||||||.+++.+++.+ ++ |+++|+++++.++. ..... +
T Consensus 125 i~~l~~~l~~v~~~-~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (994)
T PRK07868 125 VVALSEAIDTVKDV-TGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFMADHV 203 (994)
T ss_pred HHHHHHHHHHHHHh-hCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccchhhh
Confidence 3 3444444433 246899999999999999988755 43 99999866553211 00000 0
Q ss_pred HHHHhhhCCchh-------------HHHHH-------------------HHH-------------HHHHhhhhccc-cc-
Q 013268 180 VDVYKIRLPKFT-------------VKMAV-------------------QYM-------------RRVIQKKAKFD-IM- 212 (446)
Q Consensus 180 ~~~~~~~~~~~~-------------~~~~~-------------------~~~-------------~~~~~~~~~~~-~~- 212 (446)
... ..+|... ..... .+. ..++......+ ..
T Consensus 204 ~~~--~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g~~~~~~~~~~~~~n~~~~ 281 (994)
T PRK07868 204 FNR--LDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSGPAISELLKQFIAHNRMMT 281 (994)
T ss_pred hhc--CCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccchHHHHHHHHHHHHhCcccC
Confidence 000 0001000 00000 000 00000000000 00
Q ss_pred -ccch---hhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEE-eCCCCCCC-----ChhHHHHHHHHHHHhh
Q 013268 213 -DLNC---LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK-FDGDHNSS-----RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 213 -~~~~---~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~-~~ggH~~~-----~~~~~~~~i~~Fl~~~ 282 (446)
.... ...+++|++|+|+++|++|.++|++.++.+.+.+++.....+ .++||+.. .+++++..|.+||.++
T Consensus 282 g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~wl~~~ 361 (994)
T PRK07868 282 GGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADWVKWL 361 (994)
T ss_pred ceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHHHHHh
Confidence 0001 124788999999999999999999999999998875443234 44599955 5778999999999998
Q ss_pred cCC
Q 013268 283 LHP 285 (446)
Q Consensus 283 L~~ 285 (446)
-..
T Consensus 362 ~~~ 364 (994)
T PRK07868 362 EGD 364 (994)
T ss_pred ccC
Confidence 654
No 87
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.60 E-value=3.1e-14 Score=129.52 Aligned_cols=127 Identities=24% Similarity=0.313 Sum_probs=93.8
Q ss_pred eeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcC-
Q 013268 36 KRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS-NITLFTLDFSGSGLSDGDYVS- 113 (446)
Q Consensus 36 ~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~- 113 (446)
+.+++.+...++ ++..++-.| .....|+++++||+|.+.-.|..++..+..+ ..+|+++|+||||++.-....
T Consensus 49 ekedv~i~~~~~-t~n~Y~t~~----~~t~gpil~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~d 123 (343)
T KOG2564|consen 49 EKEDVSIDGSDL-TFNVYLTLP----SATEGPILLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDD 123 (343)
T ss_pred cccccccCCCcc-eEEEEEecC----CCCCccEEEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhh
Confidence 456666665555 666666555 3467899999999999999999998887665 678999999999999743322
Q ss_pred CCcc-hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHh--CCCccEEEEeCC
Q 013268 114 LGWH-EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSA 168 (446)
Q Consensus 114 ~~~~-~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~--~p~v~~lVl~sp 168 (446)
.... ...|+.++++++-.. ...+|+|+||||||.+|...|.. -|.+.|++.+.-
T Consensus 124 lS~eT~~KD~~~~i~~~fge-~~~~iilVGHSmGGaIav~~a~~k~lpsl~Gl~viDV 180 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGE-LPPQIILVGHSMGGAIAVHTAASKTLPSLAGLVVIDV 180 (343)
T ss_pred cCHHHHHHHHHHHHHHHhcc-CCCceEEEeccccchhhhhhhhhhhchhhhceEEEEE
Confidence 2221 267787777777543 24789999999999999887765 456888877543
No 88
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.59 E-value=1.3e-13 Score=127.14 Aligned_cols=181 Identities=19% Similarity=0.184 Sum_probs=109.0
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHH-HhccCCcEEEEeCCCC------CCC---CCCC---CcCCCcch-------HHH
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAV-ILLPSNITLFTLDFSG------SGL---SDGD---YVSLGWHE-------KDD 121 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~-~L~~~Gy~Vi~~D~~G------~G~---S~~~---~~~~~~~~-------~~D 121 (446)
.++..|+||++||+|.+...+..... .+...+..++.++-|. .|. +--+ ........ .+.
T Consensus 10 ~~~~~~lvi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~ 89 (216)
T PF02230_consen 10 KGKAKPLVILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAER 89 (216)
T ss_dssp SST-SEEEEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHH
T ss_pred CCCCceEEEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHH
Confidence 55788999999999999866666555 3344467888876652 122 1000 00001011 222
Q ss_pred HHHHHHHHHhc-CCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHH
Q 013268 122 LKVVVSYLRGN-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYM 199 (446)
Q Consensus 122 ~~~~i~~l~~~-~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (446)
+.++++...+. .+.++|++.|+|+||++|+.++..+|. +.++|+++++..... ..
T Consensus 90 l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~--------------~~--------- 146 (216)
T PF02230_consen 90 LDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES--------------EL--------- 146 (216)
T ss_dssp HHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC--------------CC---------
T ss_pred HHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc--------------cc---------
Confidence 33444433332 233799999999999999999999998 999999988653110 00
Q ss_pred HHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC---CcEEEEeCC-CCCCCChhHHHHHH
Q 013268 200 RRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDG-DHNSSRPQFYYDSV 275 (446)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~~~~~~g-gH~~~~~~~~~~~i 275 (446)
. ...... -++|++++||..|+++|.+.++...+.+.. +.++..|++ ||... .+....+
T Consensus 147 -------------~-~~~~~~--~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g~gH~i~--~~~~~~~ 208 (216)
T PF02230_consen 147 -------------E-DRPEAL--AKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPGGGHEIS--PEELRDL 208 (216)
T ss_dssp -------------H-CCHCCC--CTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT-SSS----HHHHHHH
T ss_pred -------------c-cccccc--CCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCCCCCCCC--HHHHHHH
Confidence 0 000111 168999999999999999998888887763 568899996 99876 4567788
Q ss_pred HHHHHhhc
Q 013268 276 SIFFYNVL 283 (446)
Q Consensus 276 ~~Fl~~~L 283 (446)
.+||++++
T Consensus 209 ~~~l~~~~ 216 (216)
T PF02230_consen 209 REFLEKHI 216 (216)
T ss_dssp HHHHHHH-
T ss_pred HHHHhhhC
Confidence 99998763
No 89
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=99.58 E-value=6.5e-13 Score=118.93 Aligned_cols=223 Identities=17% Similarity=0.212 Sum_probs=131.5
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCC-CCCCCCCcCCCc
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS-GLSDGDYVSLGW 116 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~-G~S~~~~~~~~~ 116 (446)
.+..+...+|.+|..+.-.|+.. .....++||+..|++.....+..++.+|+..||.|+.+|...| |.|+|....+..
T Consensus 3 idhvi~~~~~~~I~vwet~P~~~-~~~~~~tiliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftm 81 (294)
T PF02273_consen 3 IDHVIRLEDGRQIRVWETRPKNN-EPKRNNTILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTM 81 (294)
T ss_dssp EEEEEEETTTEEEEEEEE---TT-S---S-EEEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------H
T ss_pred ccceeEcCCCCEEEEeccCCCCC-CcccCCeEEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcch
Confidence 34556778999999999998742 3356799999999999999999999999999999999999877 999998877766
Q ss_pred ch-HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHH-
Q 013268 117 HE-KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM- 194 (446)
Q Consensus 117 ~~-~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~- 194 (446)
.. ..++..+++|++.. +..+++|+.-|+.|-+|+..|++- ++.-+|..-+..++...+......-....|....+.
T Consensus 82 s~g~~sL~~V~dwl~~~-g~~~~GLIAaSLSaRIAy~Va~~i-~lsfLitaVGVVnlr~TLe~al~~Dyl~~~i~~lp~d 159 (294)
T PF02273_consen 82 SIGKASLLTVIDWLATR-GIRRIGLIAASLSARIAYEVAADI-NLSFLITAVGVVNLRDTLEKALGYDYLQLPIEQLPED 159 (294)
T ss_dssp HHHHHHHHHHHHHHHHT-T---EEEEEETTHHHHHHHHTTTS---SEEEEES--S-HHHHHHHHHSS-GGGS-GGG--SE
T ss_pred HHhHHHHHHHHHHHHhc-CCCcchhhhhhhhHHHHHHHhhcc-CcceEEEEeeeeeHHHHHHHHhccchhhcchhhCCCc
Confidence 44 78999999999955 778899999999999999999844 688899888999888766654432222222111100
Q ss_pred ---------HHHHHHHHHhhhhccccccc-chhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC-CCcEEEEeCC-C
Q 013268 195 ---------AVQYMRRVIQKKAKFDIMDL-NCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA-GDKNIIKFDG-D 262 (446)
Q Consensus 195 ---------~~~~~~~~~~~~~~~~~~~~-~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~-~~~~~~~~~g-g 262 (446)
...+....+ ...+.+. +....++++.+|++.+++.+|..|......++...++ +..+++.++| .
T Consensus 160 ldfeGh~l~~~vFv~dc~----e~~w~~l~ST~~~~k~l~iP~iaF~A~~D~WV~q~eV~~~~~~~~s~~~klysl~Gs~ 235 (294)
T PF02273_consen 160 LDFEGHNLGAEVFVTDCF----EHGWDDLDSTINDMKRLSIPFIAFTANDDDWVKQSEVEELLDNINSNKCKLYSLPGSS 235 (294)
T ss_dssp EEETTEEEEHHHHHHHHH----HTT-SSHHHHHHHHTT--S-EEEEEETT-TTS-HHHHHHHHTT-TT--EEEEEETT-S
T ss_pred ccccccccchHHHHHHHH----HcCCccchhHHHHHhhCCCCEEEEEeCCCccccHHHHHHHHHhcCCCceeEEEecCcc
Confidence 111222211 1111111 2346677889999999999999999999999988776 3556777788 9
Q ss_pred CCCCC
Q 013268 263 HNSSR 267 (446)
Q Consensus 263 H~~~~ 267 (446)
|..-+
T Consensus 236 HdL~e 240 (294)
T PF02273_consen 236 HDLGE 240 (294)
T ss_dssp S-TTS
T ss_pred chhhh
Confidence 98773
No 90
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=99.55 E-value=1.8e-13 Score=146.65 Aligned_cols=224 Identities=20% Similarity=0.267 Sum_probs=163.2
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-----HHHHHHHhccCCcEEEEeCCCCCCCCCCCC-----cCCC
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-----ANEAAVILLPSNITLFTLDFSGSGLSDGDY-----VSLG 115 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-----~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~-----~~~~ 115 (446)
+|....+.+.+|++....++.|++|.+||+.++... .......+...|+.|+.+|.||.|...... ...+
T Consensus 506 ~~~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~~~~~~~~~~~~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG 585 (755)
T KOG2100|consen 506 DGITANAILILPPNFDPSKKYPLLVVVYGGPGSQSVTSKFSVDWNEVVVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLG 585 (755)
T ss_pred ccEEEEEEEecCCCCCCCCCCCEEEEecCCCCcceeeeeEEecHHHHhhccCCeEEEEEcCCCcCCcchhHHHHhhhhcC
Confidence 999999999999988888899999999999974221 111223566789999999999998776442 3345
Q ss_pred cchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC--ccEEEEeCCccCHHHHHHHHHHHHhhhCCchh
Q 013268 116 WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (446)
Q Consensus 116 ~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~ 191 (446)
..+++|...+++++.+..-+ .+|.|+|+|.||++++.++..+|. ++|.+.++|..++. .....-.......|...
T Consensus 586 ~~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd~~-~yds~~terymg~p~~~ 664 (755)
T KOG2100|consen 586 DVEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTDWL-YYDSTYTERYMGLPSEN 664 (755)
T ss_pred CcchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceeeee-eecccccHhhcCCCccc
Confidence 55689999999999887643 799999999999999999999984 78889999988764 21111100000111111
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcE-EEEEeCCCCCCChHHHHHHHHHcCC---CcEEEEeCC-CCCCC
Q 013268 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPA-LFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFDG-DHNSS 266 (446)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pv-Lii~G~~D~~vp~~~~~~l~~~l~~---~~~~~~~~g-gH~~~ 266 (446)
... ..+..+...+..++.|. |++||+.|..|+.+++..+++++.. ...+.++++ +|...
T Consensus 665 ~~~----------------y~e~~~~~~~~~~~~~~~LliHGt~DdnVh~q~s~~~~~aL~~~gv~~~~~vypde~H~is 728 (755)
T KOG2100|consen 665 DKG----------------YEESSVSSPANNIKTPKLLLIHGTEDDNVHFQQSAILIKALQNAGVPFRLLVYPDENHGIS 728 (755)
T ss_pred cch----------------hhhccccchhhhhccCCEEEEEcCCcCCcCHHHHHHHHHHHHHCCCceEEEEeCCCCcccc
Confidence 000 11123334555566666 9999999999999999999988762 467888888 99977
Q ss_pred Ch---hHHHHHHHHHHHhhcCCC
Q 013268 267 RP---QFYYDSVSIFFYNVLHPP 286 (446)
Q Consensus 267 ~~---~~~~~~i~~Fl~~~L~~~ 286 (446)
+. ..+...+..||..++..+
T Consensus 729 ~~~~~~~~~~~~~~~~~~~~~~~ 751 (755)
T KOG2100|consen 729 YVEVISHLYEKLDRFLRDCFGSP 751 (755)
T ss_pred cccchHHHHHHHHHHHHHHcCcc
Confidence 32 578889999999887643
No 91
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=6.8e-13 Score=119.95 Aligned_cols=208 Identities=13% Similarity=0.098 Sum_probs=134.4
Q ss_pred CCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCC----CCcE
Q 013268 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ----TSRI 138 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~----~~~i 138 (446)
....+.++.+|-.||++..|..+...|.. .+.++++.+||+|..-+.+. ..|+..+++.+..... ..++
T Consensus 4 ~~~~~~L~cfP~AGGsa~~fr~W~~~lp~-~iel~avqlPGR~~r~~ep~------~~di~~Lad~la~el~~~~~d~P~ 76 (244)
T COG3208 4 PGARLRLFCFPHAGGSASLFRSWSRRLPA-DIELLAVQLPGRGDRFGEPL------LTDIESLADELANELLPPLLDAPF 76 (244)
T ss_pred CCCCceEEEecCCCCCHHHHHHHHhhCCc-hhheeeecCCCcccccCCcc------cccHHHHHHHHHHHhccccCCCCe
Confidence 35667889999999999999998887765 59999999999997755443 2344444444443333 2689
Q ss_pred EEEEechhHHHHHHHHHhCCC----ccEEEEeCCccC------------HHHHHHHHHHHHhhhCCchhHHHHHHHHHHH
Q 013268 139 GLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD------------LFDLMLELVDVYKIRLPKFTVKMAVQYMRRV 202 (446)
Q Consensus 139 ~lvG~S~GG~ial~~a~~~p~----v~~lVl~sp~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (446)
.++||||||++|..+|.+..+ +.++.+.+.... -.+.+..+.+..+.....+.......++-.+
T Consensus 77 alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPi 156 (244)
T COG3208 77 ALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHLDDADFLADLVDLGGTPPELLEDPELMALFLPI 156 (244)
T ss_pred eecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHH
Confidence 999999999999999987432 566666543221 1123344444333221112222333333333
Q ss_pred HhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC--ChhHHHHHHHHHH
Q 013268 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS--RPQFYYDSVSIFF 279 (446)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~--~~~~~~~~i~~Fl 279 (446)
++...... ..+.. ..-..+.||+.++.|++|..+..+....+.+..++..++.+++|||++. ..+++...|.+.+
T Consensus 157 lRAD~~~~-e~Y~~-~~~~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~l 233 (244)
T COG3208 157 LRADFRAL-ESYRY-PPPAPLACPIHAFGGEKDHEVSRDELGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQHL 233 (244)
T ss_pred HHHHHHHh-ccccc-CCCCCcCcceEEeccCcchhccHHHHHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHHh
Confidence 32211110 01111 1124678999999999999999999999999888889999999999988 3445555554444
No 92
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=99.54 E-value=2.7e-14 Score=137.42 Aligned_cols=205 Identities=20% Similarity=0.259 Sum_probs=116.5
Q ss_pred ceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH------------------HHHHHHhccCCcE
Q 013268 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA------------------NEAAVILLPSNIT 95 (446)
Q Consensus 34 ~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~------------------~~~~~~L~~~Gy~ 95 (446)
.|..+.+.|...++..+.+++++|++. .++.|+||++||-++..+.. ..++..|+++||.
T Consensus 85 GY~~EKv~f~~~p~~~vpaylLvPd~~--~~p~PAVL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYV 162 (390)
T PF12715_consen 85 GYTREKVEFNTTPGSRVPAYLLVPDGA--KGPFPAVLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYV 162 (390)
T ss_dssp TEEEEEEEE--STTB-EEEEEEEETT----S-EEEEEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSE
T ss_pred CeEEEEEEEEccCCeeEEEEEEecCCC--CCCCCEEEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCE
Confidence 378899999999999999999999852 67899999999988654331 1346789999999
Q ss_pred EEEeCCCCCCCCCCCCcCC-----------------Ccc----hHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHH
Q 013268 96 LFTLDFSGSGLSDGDYVSL-----------------GWH----EKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLL 152 (446)
Q Consensus 96 Vi~~D~~G~G~S~~~~~~~-----------------~~~----~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~ 152 (446)
|+++|.+|+|+........ ++. ..-|...+++||.++..+ ++|+++|+||||..++.
T Consensus 163 vla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~ 242 (390)
T PF12715_consen 163 VLAPDALGFGERGDMEGAAQGSNYDCQALARNLLMLGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWW 242 (390)
T ss_dssp EEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHHTT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHH
T ss_pred EEEEccccccccccccccccccchhHHHHHHHHHHcCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHH
Confidence 9999999999865321111 000 123455689999998776 89999999999999999
Q ss_pred HHHhCCCccEEEEeCCccCHHHHHHHHH--H---------HHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCC
Q 013268 153 YGAEDPSIAGMVLDSAFSDLFDLMLELV--D---------VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAP 221 (446)
Q Consensus 153 ~a~~~p~v~~lVl~sp~~~~~~~~~~~~--~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (446)
+|+..++|++.|..+-.....+....+. . .+...+|.+. ..+++. +....+
T Consensus 243 LaALDdRIka~v~~~~l~~~~~~~~~mt~~~~~~~~~~~~~~~~~iPgl~---------------r~~D~P--dIasli- 304 (390)
T PF12715_consen 243 LAALDDRIKATVANGYLCTTQERALLMTMPNNNGLRGFPNCICNYIPGLW---------------RYFDFP--DIASLI- 304 (390)
T ss_dssp HHHH-TT--EEEEES-B--HHHHHHHB----TTS----SS-GGG--TTCC---------------CC--HH--HHHHTT-
T ss_pred HHHcchhhHhHhhhhhhhccchhhHhhccccccccCcCcchhhhhCccHH---------------hhCccH--HHHHHh-
Confidence 9999999999888776655443211110 0 0000111110 000000 111111
Q ss_pred CCCCcEEEEEeCCCCCCChHHHHHHHHHcCC--CcEEEEeCC
Q 013268 222 KTFIPALFGHASEDKFIRARHSDLIFNAYAG--DKNIIKFDG 261 (446)
Q Consensus 222 ~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~--~~~~~~~~g 261 (446)
-..|+|++.|..|+.+|. .+..++.... +.++..+|+
T Consensus 305 -APRPll~~nG~~Dklf~i--V~~AY~~~~~p~n~~~~~~p~ 343 (390)
T PF12715_consen 305 -APRPLLFENGGKDKLFPI--VRRAYAIMGAPDNFQIHHYPK 343 (390)
T ss_dssp -TTS-EEESS-B-HHHHHH--HHHHHHHTT-GGGEEE---GG
T ss_pred -CCCcchhhcCCcccccHH--HHHHHHhcCCCcceEEeeccc
Confidence 135999999999998765 6777777653 445555554
No 93
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=99.53 E-value=2.3e-13 Score=135.89 Aligned_cols=229 Identities=17% Similarity=0.220 Sum_probs=157.8
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh---HH--H--HHHHhccCCcEEEEeCCCCCCCCCCC
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD---AN--E--AAVILLPSNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~---~~--~--~~~~L~~~Gy~Vi~~D~~G~G~S~~~ 110 (446)
+-+.|.+..|.++++-+|.|.+...+++.|+|+++-|+++-.-. |. . -...|+..||.|+.+|-||.-...-.
T Consensus 614 eif~fqs~tg~~lYgmiyKPhn~~pgkkYptvl~VYGGP~VQlVnnsfkgi~ylR~~~LaslGy~Vv~IDnRGS~hRGlk 693 (867)
T KOG2281|consen 614 EIFSFQSKTGLTLYGMIYKPHNFQPGKKYPTVLNVYGGPGVQLVNNSFKGIQYLRFCRLASLGYVVVFIDNRGSAHRGLK 693 (867)
T ss_pred hheeeecCCCcEEEEEEEccccCCCCCCCceEEEEcCCCceEEeeccccceehhhhhhhhhcceEEEEEcCCCccccchh
Confidence 44778888899999999999987777889999999999863221 11 1 14578889999999999997554422
Q ss_pred C-----cCCCcchHHHHHHHHHHHHhcCCC---CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHH
Q 013268 111 Y-----VSLGWHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVD 181 (446)
Q Consensus 111 ~-----~~~~~~~~~D~~~~i~~l~~~~~~---~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~ 181 (446)
+ ...+.-+++|-.+.+++|.++.+. ++|+|.|+|+||++++....++|+ ++++|..+|..+....-....+
T Consensus 694 FE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGapVT~W~~YDTgYTE 773 (867)
T KOG2281|consen 694 FESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAPVTDWRLYDTGYTE 773 (867)
T ss_pred hHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCcceeeeeecccchh
Confidence 2 233555689999999999999754 899999999999999999999999 6777777766542110000001
Q ss_pred HHhhhCCchhHHHHHHHHHHHHhhhhcccccc-cchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEE
Q 013268 182 VYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMD-LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNII 257 (446)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~ 257 (446)
.+. ..|... ...+.... ......++.-...+|++||--|.-|+..+.-.+...+- +..++.
T Consensus 774 RYM-g~P~~n--------------E~gY~agSV~~~VeklpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagKpyeL~ 838 (867)
T KOG2281|consen 774 RYM-GYPDNN--------------EHGYGAGSVAGHVEKLPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGKPYELQ 838 (867)
T ss_pred hhc-CCCccc--------------hhcccchhHHHHHhhCCCCCceEEEEecccccchhhhhHHHHHHHHHhCCCceEEE
Confidence 110 112100 00000000 01113344444569999999999999999888877653 567899
Q ss_pred EeCC-CCCCCChh---HHHHHHHHHHHh
Q 013268 258 KFDG-DHNSSRPQ---FYYDSVSIFFYN 281 (446)
Q Consensus 258 ~~~g-gH~~~~~~---~~~~~i~~Fl~~ 281 (446)
+||. -|..-.++ -+-..+..|+.+
T Consensus 839 IfP~ERHsiR~~es~~~yE~rll~FlQ~ 866 (867)
T KOG2281|consen 839 IFPNERHSIRNPESGIYYEARLLHFLQE 866 (867)
T ss_pred EccccccccCCCccchhHHHHHHHHHhh
Confidence 9998 89866433 445567788765
No 94
>COG0400 Predicted esterase [General function prediction only]
Probab=99.50 E-value=1.6e-12 Score=117.52 Aligned_cols=177 Identities=24% Similarity=0.274 Sum_probs=122.7
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCC--CCC-------CCCCcCCCc-chHHHHHHHHHHHHh
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGS--GLS-------DGDYVSLGW-HEKDDLKVVVSYLRG 131 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~--G~S-------~~~~~~~~~-~~~~D~~~~i~~l~~ 131 (446)
.+...|+||++||.|++..++..+......+ +.++.+.-+-. |.. .+.+..... ...+.+.+.++.+.+
T Consensus 14 ~~p~~~~iilLHG~Ggde~~~~~~~~~~~P~-~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~ 92 (207)
T COG0400 14 GDPAAPLLILLHGLGGDELDLVPLPELILPN-ATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAE 92 (207)
T ss_pred CCCCCcEEEEEecCCCChhhhhhhhhhcCCC-CeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHH
Confidence 4567789999999999998888876666664 55555433211 000 011110000 113345556666666
Q ss_pred cCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhc
Q 013268 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAK 208 (446)
Q Consensus 132 ~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (446)
+.+. ++++++|+|.||++++.+...+|. ++++|+.+|...+...
T Consensus 93 ~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~~--------------------------------- 139 (207)
T COG0400 93 EYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEPE--------------------------------- 139 (207)
T ss_pred HhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCCc---------------------------------
Confidence 6666 899999999999999999999998 9999998886542110
Q ss_pred ccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCCCCCCCChhHHHHHHHHHHHhhc
Q 013268 209 FDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 209 ~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~ggH~~~~~~~~~~~i~~Fl~~~L 283 (446)
..-..-.+|++++||+.|++||...+.++.+.+. .++....+++||... .+..+.+.+|+.+.+
T Consensus 140 ---------~~~~~~~~pill~hG~~Dpvvp~~~~~~l~~~l~~~g~~v~~~~~~~GH~i~--~e~~~~~~~wl~~~~ 206 (207)
T COG0400 140 ---------LLPDLAGTPILLSHGTEDPVVPLALAEALAEYLTASGADVEVRWHEGGHEIP--PEELEAARSWLANTL 206 (207)
T ss_pred ---------cccccCCCeEEEeccCcCCccCHHHHHHHHHHHHHcCCCEEEEEecCCCcCC--HHHHHHHHHHHHhcc
Confidence 0001224799999999999999998888877664 467788889999976 455677888987754
No 95
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.49 E-value=2.8e-12 Score=118.88 Aligned_cols=209 Identities=19% Similarity=0.257 Sum_probs=122.3
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccC--CcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPS--NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~--Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
.|.|+++||++++...|......+... .|+|+++|+||||.|. .. . .........+..+.+..+..++.++||
T Consensus 21 ~~~i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~-~~---~-~~~~~~~~~~~~~~~~~~~~~~~l~G~ 95 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSD-PA---G-YSLSAYADDLAALLDALGLEKVVLVGH 95 (282)
T ss_pred CCeEEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCC-cc---c-ccHHHHHHHHHHHHHHhCCCceEEEEe
Confidence 559999999999988887743333332 1999999999999997 11 1 111222333444444546677999999
Q ss_pred chhHHHHHHHHHhCCC-ccEEEEeCCccC-----------HH-HHHHHHHHHH------------hhh--CCchh-----
Q 013268 144 SMGAVTSLLYGAEDPS-IAGMVLDSAFSD-----------LF-DLMLELVDVY------------KIR--LPKFT----- 191 (446)
Q Consensus 144 S~GG~ial~~a~~~p~-v~~lVl~sp~~~-----------~~-~~~~~~~~~~------------~~~--~~~~~----- 191 (446)
||||.+++.++..+|+ ++++|++++... .. .......... ... .....
T Consensus 96 S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (282)
T COG0596 96 SMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLGLDAAAFAALLAALGLLAALAAAARA 175 (282)
T ss_pred cccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhccchhhhhhhhhcccccccccccchh
Confidence 9999999999999998 999999886532 00 0000000000 000 00000
Q ss_pred --HH----HHHHHHHHHHhhhh--ccc-----ccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEE
Q 013268 192 --VK----MAVQYMRRVIQKKA--KFD-----IMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIK 258 (446)
Q Consensus 192 --~~----~~~~~~~~~~~~~~--~~~-----~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~ 258 (446)
.. .............. ... ...........++.+|+++++|.+|.+.+......+.+.++...++++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~~d~~~~~~~~~~~~~~~~~~~~~~~ 255 (282)
T COG0596 176 GLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGEDDPVVPAELARRLAAALPNDARLVV 255 (282)
T ss_pred ccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecCCCCcCCHHHHHHHHhhCCCCceEEE
Confidence 00 00000000000000 000 000012234566789999999999977776665666666654356777
Q ss_pred eCC-CCCCC--ChhHHHHHHHHHH
Q 013268 259 FDG-DHNSS--RPQFYYDSVSIFF 279 (446)
Q Consensus 259 ~~g-gH~~~--~~~~~~~~i~~Fl 279 (446)
+++ ||+.. .++.+.+.+.+|+
T Consensus 256 ~~~~gH~~~~~~p~~~~~~i~~~~ 279 (282)
T COG0596 256 IPGAGHFPHLEAPEAFAAALLAFL 279 (282)
T ss_pred eCCCCCcchhhcHHHHHHHHHHHH
Confidence 776 99977 6777777776643
No 96
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.45 E-value=5.8e-12 Score=128.11 Aligned_cols=210 Identities=11% Similarity=0.069 Sum_probs=136.9
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHH
Q 013268 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLK 123 (446)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~-----~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~ 123 (446)
.+..+.|.|.. +....++||+++++-.....+ ..++++|.++||.|+++|+++-+.......-..+ ++.+.
T Consensus 200 l~eLiqY~P~t--e~v~~~PLLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDY--v~~i~ 275 (560)
T TIGR01839 200 VLELIQYKPIT--EQQHARPLLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTY--VDALK 275 (560)
T ss_pred ceEEEEeCCCC--CCcCCCcEEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHH--HHHHH
Confidence 45556777753 335567889999887433323 4689999999999999999987766533221222 56788
Q ss_pred HHHHHHHhcCCCCcEEEEEechhHHHHHH----HHHhCCC--ccEEEEeCCccCHHH-----------HH---HHHHHHH
Q 013268 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLL----YGAEDPS--IAGMVLDSAFSDLFD-----------LM---LELVDVY 183 (446)
Q Consensus 124 ~~i~~l~~~~~~~~i~lvG~S~GG~ial~----~a~~~p~--v~~lVl~sp~~~~~~-----------~~---~~~~~~~ 183 (446)
++++.+++..+..+|.++|+||||.++.. +++.+++ |+.++++.+..++.. .+ .......
T Consensus 276 ~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf~~~g~l~~f~~e~~~~~~e~~~~~~ 355 (560)
T TIGR01839 276 EAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDSTMESPAALFADEQTLEAAKRRSYQA 355 (560)
T ss_pred HHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeecccccCCCCcchhccChHHHHHHHHHHHhc
Confidence 89999998888899999999999999986 7777773 999998776554321 00 0000000
Q ss_pred hhhCCc--------------------------------------------hhHHHHHHHHHHHHhhhhcc--cccc-cch
Q 013268 184 KIRLPK--------------------------------------------FTVKMAVQYMRRVIQKKAKF--DIMD-LNC 216 (446)
Q Consensus 184 ~~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~--~~~~-~~~ 216 (446)
+ .++. ++.....+++. +....... .... ...
T Consensus 356 G-~lpg~~ma~~F~~LrP~dliw~y~v~~yllg~~p~~fdll~Wn~D~t~lPg~~~~e~l~-ly~~N~L~~pG~l~v~G~ 433 (560)
T TIGR01839 356 G-VLDGSEMAKVFAWMRPNDLIWNYWVNNYLLGNEPPAFDILYWNNDTTRLPAAFHGDLLD-MFKSNPLTRPDALEVCGT 433 (560)
T ss_pred C-CcCHHHHHHHHHhcCchhhhHHHHHHHhhcCCCcchhhHHHHhCcCccchHHHHHHHHH-HHhcCCCCCCCCEEECCE
Confidence 0 0110 00011111110 00000000 0000 011
Q ss_pred hhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCC
Q 013268 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHN 264 (446)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~ 264 (446)
.-.+++|++|+|++.|..|.++|++.+..+.+.+..+++++..++||.
T Consensus 434 ~idL~~I~~Pvl~va~~~DHIvPw~s~~~~~~l~gs~~~fvl~~gGHI 481 (560)
T TIGR01839 434 PIDLKKVKCDSFSVAGTNDHITPWDAVYRSALLLGGKRRFVLSNSGHI 481 (560)
T ss_pred EechhcCCCCeEEEecCcCCcCCHHHHHHHHHHcCCCeEEEecCCCcc
Confidence 235678999999999999999999999999999988888999999997
No 97
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.44 E-value=6.7e-12 Score=114.64 Aligned_cols=182 Identities=16% Similarity=0.157 Sum_probs=114.2
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH--HHHhcc-CCcEEEEeCCCCCCCCCC------CCcCCCcchHH
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA--AVILLP-SNITLFTLDFSGSGLSDG------DYVSLGWHEKD 120 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~--~~~L~~-~Gy~Vi~~D~~G~G~S~~------~~~~~~~~~~~ 120 (446)
|.|++|+|+..+. .+.|+||++||.+++...+... ...+++ +||.|+.++........+ .....+..+..
T Consensus 1 l~Y~lYvP~~~~~-~~~PLVv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~ 79 (220)
T PF10503_consen 1 LSYRLYVPPGAPR-GPVPLVVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVA 79 (220)
T ss_pred CcEEEecCCCCCC-CCCCEEEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchh
Confidence 4578999986432 4679999999999998776543 234554 599999998653221111 11112223466
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH--HHHHHHHHHHHhhhCCchhHHHH
Q 013268 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--FDLMLELVDVYKIRLPKFTVKMA 195 (446)
Q Consensus 121 D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 195 (446)
.+..+++++..++.+ .+|++.|+|.||+++..++..+|+ +.++.+.++.... ...... ...........+...
T Consensus 80 ~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~~a~~~~~a-~~~m~~g~~~~p~~~- 157 (220)
T PF10503_consen 80 FIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYGCAASGASA-LSAMRSGPRPAPAAA- 157 (220)
T ss_pred hHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeecccccccccCcccH-HHHhhCCCCCChHHH-
Confidence 788889999888776 799999999999999999999999 7777776654321 000000 000000000001000
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC
Q 013268 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (446)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (446)
..... ..... -..|++++||+.|..|.+.+..++.+++.
T Consensus 158 ~~a~~---------------~~g~~--~~~P~~v~hG~~D~tV~~~n~~~~~~q~~ 196 (220)
T PF10503_consen 158 WGARS---------------DAGAY--PGYPRIVFHGTADTTVNPQNADQLVAQWL 196 (220)
T ss_pred HHhhh---------------hccCC--CCCCEEEEecCCCCccCcchHHHHHHHHH
Confidence 00000 00011 12599999999999999999888887754
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=99.44 E-value=8.8e-12 Score=111.23 Aligned_cols=181 Identities=14% Similarity=0.165 Sum_probs=114.0
Q ss_pred EEEECCCCCChhhHH--HHHHHhccCC--cEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEec
Q 013268 69 VVYCHGNSGCRADAN--EAAVILLPSN--ITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (446)
Q Consensus 69 VVllHG~g~~~~~~~--~~~~~L~~~G--y~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 144 (446)
||++||+.++..... .+.+.+.+.+ ..+.++|++.+ .+.+.+.++.+.+....+.+.|+|.|
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~--------------p~~a~~~l~~~i~~~~~~~~~liGSS 67 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF--------------PEEAIAQLEQLIEELKPENVVLIGSS 67 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC--------------HHHHHHHHHHHHHhCCCCCeEEEEEC
Confidence 799999998765543 4456666654 56777777621 23344444444444344569999999
Q ss_pred hhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC
Q 013268 145 MGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF 224 (446)
Q Consensus 145 ~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 224 (446)
|||+.|..+|.+++ +++ |+++|.......+...+.................... ....+. .....-.
T Consensus 68 lGG~~A~~La~~~~-~~a-vLiNPav~p~~~l~~~iG~~~~~~~~e~~~~~~~~~~----~l~~l~-------~~~~~~~ 134 (187)
T PF05728_consen 68 LGGFYATYLAERYG-LPA-VLINPAVRPYELLQDYIGEQTNPYTGESYELTEEHIE----ELKALE-------VPYPTNP 134 (187)
T ss_pred hHHHHHHHHHHHhC-CCE-EEEcCCCCHHHHHHHhhCccccCCCCccceechHhhh----hcceEe-------ccccCCC
Confidence 99999999998886 555 8889999887776654432111111110000000000 000000 0012234
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCCChhHHHHHHHHHH
Q 013268 225 IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFF 279 (446)
Q Consensus 225 ~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~~~~~~~~~i~~Fl 279 (446)
.++++++++.|.+++++.+...+ .+.+.++..+|+|-+..-++....|.+|+
T Consensus 135 ~~~lvll~~~DEvLd~~~a~~~~---~~~~~~i~~ggdH~f~~f~~~l~~i~~f~ 186 (187)
T PF05728_consen 135 ERYLVLLQTGDEVLDYREAVAKY---RGCAQIIEEGGDHSFQDFEEYLPQIIAFL 186 (187)
T ss_pred ccEEEEEecCCcccCHHHHHHHh---cCceEEEEeCCCCCCccHHHHHHHHHHhh
Confidence 68999999999999996665444 34556666667999998888899999987
No 99
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=99.43 E-value=7.6e-12 Score=123.48 Aligned_cols=249 Identities=16% Similarity=0.214 Sum_probs=166.4
Q ss_pred CCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHH------HHHHHhccCCcEEEEeCCCCC
Q 013268 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN------EAAVILLPSNITLFTLDFSGS 104 (446)
Q Consensus 31 ~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~------~~~~~L~~~Gy~Vi~~D~~G~ 104 (446)
..-.|+.|+..+++.||..|. .+-.|.. .+++|+|++.||+-.++..|. .++-.|+++||.|..-+.||.
T Consensus 42 ~~~gy~~E~h~V~T~DgYiL~-lhRIp~~---~~~rp~Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn 117 (403)
T KOG2624|consen 42 EKYGYPVEEHEVTTEDGYILT-LHRIPRG---KKKRPVVLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGN 117 (403)
T ss_pred HHcCCceEEEEEEccCCeEEE-EeeecCC---CCCCCcEEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCc
Confidence 344566799999999999544 4556653 288999999999999888773 356678999999999999997
Q ss_pred CCCCC----------CCcCCCcch--HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC----ccEEEEeCC
Q 013268 105 GLSDG----------DYVSLGWHE--KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSA 168 (446)
Q Consensus 105 G~S~~----------~~~~~~~~~--~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~----v~~lVl~sp 168 (446)
-.|.. .+-.++|++ ..|+.+.|+++.+.-+.++++.+|||.|+.+...++...|+ |+.+++++|
T Consensus 118 ~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP 197 (403)
T KOG2624|consen 118 TYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAP 197 (403)
T ss_pred ccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecc
Confidence 65542 123344555 67999999999998888999999999999999999999876 899999998
Q ss_pred ccCHH---HHHHHHHHHH-------hh------hCCchh-HH-H----------HHHHHHHH------------------
Q 013268 169 FSDLF---DLMLELVDVY-------KI------RLPKFT-VK-M----------AVQYMRRV------------------ 202 (446)
Q Consensus 169 ~~~~~---~~~~~~~~~~-------~~------~~~~~~-~~-~----------~~~~~~~~------------------ 202 (446)
..... .......... .. .+|... .+ . ........
T Consensus 198 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~fg~~~f~p~~~~~~~~~~~~C~~~~~~~~lC~~~~~~~~G~~~~~~n~~~~~ 277 (403)
T KOG2624|consen 198 AAFPKHIKSLLNKFLDPFLGAFSLLPLLFGRKEFLPSNLFIKKFARKICSGSKIFADLCSNFLFLLVGWNSNNWNTTLLP 277 (403)
T ss_pred hhhhcccccHHHHhhhhhhhhhhHHHHhcCCccccchhhHHHHHHHHHhcchhHHHHHHHHHHHHHcCcchHhhhhcccc
Confidence 77332 1111111100 00 001000 00 0 00000000
Q ss_pred ------------------Hhhh--h---ccccc----------ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHH
Q 013268 203 ------------------IQKK--A---KFDIM----------DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNA 249 (446)
Q Consensus 203 ------------------~~~~--~---~~~~~----------~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~ 249 (446)
.+.. . .++.. ...+.-.+.++++|+.+.+|.+|.++.++..+.+...
T Consensus 278 ~~~~h~pagtSvk~~~H~~Q~~~s~~f~~yD~G~~~N~~~Y~q~~pP~Y~l~~i~~P~~l~~g~~D~l~~~~DV~~~~~~ 357 (403)
T KOG2624|consen 278 VYLAHLPAGTSVKNIVHWAQIVRSGKFRKYDYGSKRNLKHYGQSTPPEYDLTNIKVPTALYYGDNDWLADPEDVLILLLV 357 (403)
T ss_pred hhhccCCCCccHHHHHHHHHHhcCCCccccCCCccccHhhcCCCCCCCCCccccccCEEEEecCCcccCCHHHHHHHHHh
Confidence 0000 0 00000 0112334566899999999999999999999988888
Q ss_pred cCCCcEE--EEeCC-CCCCC-----ChhHHHHHHHHHHHhhc
Q 013268 250 YAGDKNI--IKFDG-DHNSS-----RPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 250 l~~~~~~--~~~~g-gH~~~-----~~~~~~~~i~~Fl~~~L 283 (446)
+++.... +.++. .|... .++.+++.|++.+....
T Consensus 358 ~~~~~~~~~~~~~~ynHlDFi~g~da~~~vy~~vi~~~~~~~ 399 (403)
T KOG2624|consen 358 LPNSVIKYIVPIPEYNHLDFIWGLDAKEEVYDPVIERLRLFE 399 (403)
T ss_pred cccccccccccCCCccceeeeeccCcHHHHHHHHHHHHHhhh
Confidence 7754432 22566 88744 47889999999888765
No 100
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=99.43 E-value=1.2e-11 Score=119.64 Aligned_cols=233 Identities=18% Similarity=0.166 Sum_probs=143.8
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCC-----ChhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCCC
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSG-----CRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLG 115 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~-----~~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~~~~~~ 115 (446)
+.......+..++|.|.........|+|||+||+|. ....|..+...++. .+..|+.+||| .....+....
T Consensus 66 v~~~~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYR---LAPEh~~Pa~ 142 (336)
T KOG1515|consen 66 VTIDPFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYR---LAPEHPFPAA 142 (336)
T ss_pred eEecCCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcc---cCCCCCCCcc
Confidence 333455667788999987655478899999999983 24456777777744 48999999999 5555444444
Q ss_pred cchHHHHHHHHHHHHhc------CCCCcEEEEEechhHHHHHHHHHhC-------CCccEEEEeCCccCHHHHHHHHHHH
Q 013268 116 WHEKDDLKVVVSYLRGN------KQTSRIGLWGRSMGAVTSLLYGAED-------PSIAGMVLDSAFSDLFDLMLELVDV 182 (446)
Q Consensus 116 ~~~~~D~~~~i~~l~~~------~~~~~i~lvG~S~GG~ial~~a~~~-------p~v~~lVl~sp~~~~~~~~~~~~~~ 182 (446)
.+|...++.|+.++ .+.++|+|+|-|.||.+|..+|.+. +.+++.|++.|+....+....-.+.
T Consensus 143 ---y~D~~~Al~w~~~~~~~~~~~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~~~~~~~e~~~ 219 (336)
T KOG1515|consen 143 ---YDDGWAALKWVLKNSWLKLGADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQGTDRTESEKQQ 219 (336)
T ss_pred ---chHHHHHHHHHHHhHHHHhCCCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCCCCCCCHHHHH
Confidence 47877888777764 3448999999999999998777652 3399999999987654433322221
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhh-cccccccchhh-----hCCCCCC-cEEEEEeCCCCCCChHHHHHHHHHcC---C
Q 013268 183 YKIRLPKFTVKMAVQYMRRVIQKKA-KFDIMDLNCLK-----LAPKTFI-PALFGHASEDKFIRARHSDLIFNAYA---G 252 (446)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-----~l~~i~~-PvLii~G~~D~~vp~~~~~~l~~~l~---~ 252 (446)
.....+.........+++..+.... ..+..-.++.. ......+ |+|++.++.|.+. .....+.++++ .
T Consensus 220 ~~~~~~~~~~~~~~~~w~~~lP~~~~~~~~p~~np~~~~~~~d~~~~~lp~tlv~~ag~D~L~--D~~~~Y~~~Lkk~Gv 297 (336)
T KOG1515|consen 220 NLNGSPELARPKIDKWWRLLLPNGKTDLDHPFINPVGNSLAKDLSGLGLPPTLVVVAGYDVLR--DEGLAYAEKLKKAGV 297 (336)
T ss_pred hhcCCcchhHHHHHHHHHHhCCCCCCCcCCccccccccccccCccccCCCceEEEEeCchhhh--hhhHHHHHHHHHcCC
Confidence 1112222222222333332222222 11111122222 1222334 5999999999885 44444444444 3
Q ss_pred CcEEEEeCC-CCCCC-------ChhHHHHHHHHHHHhh
Q 013268 253 DKNIIKFDG-DHNSS-------RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 253 ~~~~~~~~g-gH~~~-------~~~~~~~~i~~Fl~~~ 282 (446)
..+++.+++ .|.+. ......+.+.+|+.+.
T Consensus 298 ~v~~~~~e~~~H~~~~~~~~~~~a~~~~~~i~~fi~~~ 335 (336)
T KOG1515|consen 298 EVTLIHYEDGFHGFHILDPSSKEAHALMDAIVEFIKSN 335 (336)
T ss_pred eEEEEEECCCeeEEEecCCchhhHHHHHHHHHHHHhhc
Confidence 455666776 88744 2236777788888754
No 101
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=99.42 E-value=1.1e-11 Score=120.84 Aligned_cols=226 Identities=17% Similarity=0.181 Sum_probs=136.2
Q ss_pred ECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCC---CChhhH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch
Q 013268 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE 118 (446)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g---~~~~~~-~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~ 118 (446)
....+..+.+++|.| ......+.|+||++||++ ++.... ......+...|+.|+.+|||- ....... ..
T Consensus 57 ~~~~~~~~~~~~y~p-~~~~~~~~p~vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrl---aPe~~~p---~~ 129 (312)
T COG0657 57 AGPSGDGVPVRVYRP-DRKAAATAPVVLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRL---APEHPFP---AA 129 (312)
T ss_pred cCCCCCceeEEEECC-CCCCCCCCcEEEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCC---CCCCCCC---ch
Confidence 344555577889998 222445789999999998 344444 344555666799999999993 3322111 23
Q ss_pred HHHHHHHHHHHHhcCC-----CCcEEEEEechhHHHHHHHHHhC-----CCccEEEEeCCccCHHHHHHHHHHHHhhhCC
Q 013268 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDLFDLMLELVDVYKIRLP 188 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~-----~~~i~lvG~S~GG~ial~~a~~~-----p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~ 188 (446)
++|+.+++.|++++.. .++|+++|+|.||.+++.++..- |..++.++++|..+... .......+.. ..
T Consensus 130 ~~d~~~a~~~l~~~~~~~g~dp~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~~-~~~~~~~~~~-~~ 207 (312)
T COG0657 130 LEDAYAAYRWLRANAAELGIDPSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLDLTS-SAASLPGYGE-AD 207 (312)
T ss_pred HHHHHHHHHHHHhhhHhhCCCccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCcc-cccchhhcCC-cc
Confidence 7899999999997742 48999999999999999888763 24799999999877654 1111111111 11
Q ss_pred chhHHHHH-HHHHHHHhhhhcccccccchh--hhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-
Q 013268 189 KFTVKMAV-QYMRRVIQKKAKFDIMDLNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG- 261 (446)
Q Consensus 189 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g- 261 (446)
.+...... .+.................+. ..+.. -.|+++++|+.|.+.+ ++..+.+++. ...++..+++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~p~~spl~~~~~~~-lPP~~i~~a~~D~l~~--~~~~~a~~L~~agv~~~~~~~~g~ 284 (312)
T COG0657 208 LLDAAAILAWFADLYLGAAPDREDPEASPLASDDLSG-LPPTLIQTAEFDPLRD--EGEAYAERLRAAGVPVELRVYPGM 284 (312)
T ss_pred ccCHHHHHHHHHHHhCcCccccCCCccCccccccccC-CCCEEEEecCCCcchh--HHHHHHHHHHHcCCeEEEEEeCCc
Confidence 11111111 222222211111000001111 11233 4689999999999987 5555555544 3567888998
Q ss_pred CCCCC--Ch---hHHHHHHHHHHH
Q 013268 262 DHNSS--RP---QFYYDSVSIFFY 280 (446)
Q Consensus 262 gH~~~--~~---~~~~~~i~~Fl~ 280 (446)
.|.+. .. ......+.+|+.
T Consensus 285 ~H~f~~~~~~~a~~~~~~~~~~l~ 308 (312)
T COG0657 285 IHGFDLLTGPEARSALRQIAAFLR 308 (312)
T ss_pred ceeccccCcHHHHHHHHHHHHHHH
Confidence 89763 21 233445556665
No 102
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=99.41 E-value=2.5e-12 Score=117.92 Aligned_cols=187 Identities=20% Similarity=0.168 Sum_probs=112.8
Q ss_pred EEEECCCCC---ChhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhc-----CCCCcEE
Q 013268 69 VVYCHGNSG---CRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGN-----KQTSRIG 139 (446)
Q Consensus 69 VVllHG~g~---~~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~-----~~~~~i~ 139 (446)
||++||++. +......++..+++ .|+.|+.+|||=. ... .....++|+.++++|+.++ .+.++|+
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~---p~~---~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~ 74 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLA---PEA---PFPAALEDVKAAYRWLLKNADKLGIDPERIV 74 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---T---TTS---STTHHHHHHHHHHHHHHHTHHHHTEEEEEEE
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeecccc---ccc---cccccccccccceeeeccccccccccccceE
Confidence 799999983 44445666777765 7999999999933 211 1123489999999999998 4558999
Q ss_pred EEEechhHHHHHHHHHhC-----CCccEEEEeCCccCH-HHHHHHHH--HHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 013268 140 LWGRSMGAVTSLLYGAED-----PSIAGMVLDSAFSDL-FDLMLELV--DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (446)
Q Consensus 140 lvG~S~GG~ial~~a~~~-----p~v~~lVl~sp~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (446)
|+|+|.||.+++.++... +.++++++++|..++ ........ ... ...+.........+...... ......
T Consensus 75 l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~ 152 (211)
T PF07859_consen 75 LIGDSAGGHLALSLALRARDRGLPKPKGIILISPWTDLQDFDGPSYDDSNEN-KDDPFLPAPKIDWFWKLYLP-GSDRDD 152 (211)
T ss_dssp EEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHSSTSTSSCHHHHHHHHH-STTSSSBHHHHHHHHHHHHS-TGGTTS
T ss_pred Eeecccccchhhhhhhhhhhhcccchhhhhcccccccchhcccccccccccc-cccccccccccccccccccc-cccccc
Confidence 999999999999988752 238999999998766 11001110 111 11122222233333332221 111111
Q ss_pred cccchhhh-CCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-CCCC
Q 013268 212 MDLNCLKL-APKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNS 265 (446)
Q Consensus 212 ~~~~~~~~-l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g-gH~~ 265 (446)
...++... -.+--.|+++++|+.|.++ ..+..++++++ .+.+++++++ +|.+
T Consensus 153 ~~~sp~~~~~~~~~Pp~~i~~g~~D~l~--~~~~~~~~~L~~~gv~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 153 PLASPLNASDLKGLPPTLIIHGEDDVLV--DDSLRFAEKLKKAGVDVELHVYPGMPHGF 209 (211)
T ss_dssp TTTSGGGSSCCTTCHEEEEEEETTSTTH--HHHHHHHHHHHHTT-EEEEEEETTEETTG
T ss_pred cccccccccccccCCCeeeeccccccch--HHHHHHHHHHHHCCCCEEEEEECCCeEEe
Confidence 12222222 1111359999999999875 56677777765 3568889998 8964
No 103
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=99.39 E-value=4.5e-12 Score=112.32 Aligned_cols=173 Identities=18% Similarity=0.182 Sum_probs=127.5
Q ss_pred cEEEEECCCCCC-hhhHHHHHHHhccCCcEEEEeCCCCC-CCCCC-CCcCC-------Cc-chHHHHHHHHHHHHhcCCC
Q 013268 67 PCVVYCHGNSGC-RADANEAAVILLPSNITLFTLDFSGS-GLSDG-DYVSL-------GW-HEKDDLKVVVSYLRGNKQT 135 (446)
Q Consensus 67 p~VVllHG~g~~-~~~~~~~~~~L~~~Gy~Vi~~D~~G~-G~S~~-~~~~~-------~~-~~~~D~~~~i~~l~~~~~~ 135 (446)
.+||.+.-..|. .......+..++..||.|+.||+-.- -.+.. +.... ++ ....++..+++||+.+...
T Consensus 40 ~~li~i~DvfG~~~~n~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~ 119 (242)
T KOG3043|consen 40 KVLIVIQDVFGFQFPNTREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDS 119 (242)
T ss_pred eEEEEEEeeeccccHHHHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCc
Confidence 456666555544 44467789999999999999998632 12221 11100 00 1267999999999988667
Q ss_pred CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc
Q 013268 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (446)
Q Consensus 136 ~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (446)
.+|+++|++|||.++..+....|.+.+++..-|... +
T Consensus 120 kkIGv~GfCwGak~vv~~~~~~~~f~a~v~~hps~~-------------------------------------------d 156 (242)
T KOG3043|consen 120 KKIGVVGFCWGAKVVVTLSAKDPEFDAGVSFHPSFV-------------------------------------------D 156 (242)
T ss_pred ceeeEEEEeecceEEEEeeccchhheeeeEecCCcC-------------------------------------------C
Confidence 999999999999999999999988888776554321 1
Q ss_pred hhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCC----cEEEEeCC-CCCCCC-------------hhHHHHHHHH
Q 013268 216 CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGD----KNIIKFDG-DHNSSR-------------PQFYYDSVSI 277 (446)
Q Consensus 216 ~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~----~~~~~~~g-gH~~~~-------------~~~~~~~i~~ 277 (446)
...+..+++|+|++.|+.|.++|++....+.+.+... .++.+|+| +|.+.. .++.++.++.
T Consensus 157 -~~D~~~vk~Pilfl~ae~D~~~p~~~v~~~ee~lk~~~~~~~~v~~f~g~~HGf~~~r~~~~~Ped~~~~eea~~~~~~ 235 (242)
T KOG3043|consen 157 -SADIANVKAPILFLFAELDEDVPPKDVKAWEEKLKENPAVGSQVKTFSGVGHGFVARRANISSPEDKKAAEEAYQRFIS 235 (242)
T ss_pred -hhHHhcCCCCEEEEeecccccCCHHHHHHHHHHHhcCcccceeEEEcCCccchhhhhccCCCChhHHHHHHHHHHHHHH
Confidence 1345567799999999999999999988888887743 25899999 998651 2467778889
Q ss_pred HHHhhc
Q 013268 278 FFYNVL 283 (446)
Q Consensus 278 Fl~~~L 283 (446)
||.+++
T Consensus 236 Wf~~y~ 241 (242)
T KOG3043|consen 236 WFKHYL 241 (242)
T ss_pred HHHHhh
Confidence 999876
No 104
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.39 E-value=4.4e-11 Score=114.36 Aligned_cols=233 Identities=13% Similarity=0.102 Sum_probs=143.6
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHH-------HHHH-------hccCCcEEEEeCCCCCC-CCCCC
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE-------AAVI-------LLPSNITLFTLDFSGSG-LSDGD 110 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~-------~~~~-------L~~~Gy~Vi~~D~~G~G-~S~~~ 110 (446)
++..|.+..|.-. ......+||++|++.++...... +.+. +--..|-||++|..|.. .|.++
T Consensus 34 ~~~~vay~T~Gtl---n~~~~NaVli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP 110 (368)
T COG2021 34 SDARVAYETYGTL---NAEKDNAVLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGP 110 (368)
T ss_pred cCcEEEEEecccc---cccCCceEEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCC
Confidence 3556677666432 33557899999999986443221 2222 33345999999999876 33322
Q ss_pred CcC----------CCcchHHHHHHHHHHHHhcCCCCcEE-EEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH--HHH-
Q 013268 111 YVS----------LGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL--FDL- 175 (446)
Q Consensus 111 ~~~----------~~~~~~~D~~~~i~~l~~~~~~~~i~-lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~--~~~- 175 (446)
... +....++|...+-+.|.+.+++.++. ++|-||||+.|+.++..+|+ |+.+|.++..... ...
T Consensus 111 ~s~~p~g~~yg~~FP~~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia 190 (368)
T COG2021 111 SSINPGGKPYGSDFPVITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIA 190 (368)
T ss_pred CCcCCCCCccccCCCcccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHH
Confidence 111 12234778888888888999998876 99999999999999999999 8777776553321 110
Q ss_pred HHHHHHHHhhhCCch----------------------------------------------------hHHHHHHHHHHHH
Q 013268 176 MLELVDVYKIRLPKF----------------------------------------------------TVKMAVQYMRRVI 203 (446)
Q Consensus 176 ~~~~~~~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~ 203 (446)
+...........|.+ ......++....+
T Consensus 191 ~~~~~r~AI~~DP~~n~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf 270 (368)
T COG2021 191 FNEVQRQAIEADPDWNGGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKF 270 (368)
T ss_pred HHHHHHHHHHhCCCccCCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHH
Confidence 111111100111111 0111111100000
Q ss_pred hh-------------hhccccc--ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC--CCCCC
Q 013268 204 QK-------------KAKFDIM--DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG--DHNSS 266 (446)
Q Consensus 204 ~~-------------~~~~~~~--~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g--gH~~~ 266 (446)
.. ...++.. .-+....+++|++|+|++.-+.|.++|++..+.+.+.++....++.++. ||.-.
T Consensus 271 ~~rfDaNsYL~lt~ald~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaF 350 (368)
T COG2021 271 VARFDANSYLYLTRALDYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAF 350 (368)
T ss_pred HhccCcchHHHHHHHHHhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhh
Confidence 00 0001100 1133445788999999999999999999999999999987655777765 89744
Q ss_pred --ChhHHHHHHHHHHHh
Q 013268 267 --RPQFYYDSVSIFFYN 281 (446)
Q Consensus 267 --~~~~~~~~i~~Fl~~ 281 (446)
+.+.+...|..||..
T Consensus 351 L~e~~~~~~~i~~fL~~ 367 (368)
T COG2021 351 LVESEAVGPLIRKFLAL 367 (368)
T ss_pred hcchhhhhHHHHHHhhc
Confidence 666777888888864
No 105
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.39 E-value=5.3e-12 Score=112.16 Aligned_cols=233 Identities=16% Similarity=0.195 Sum_probs=143.2
Q ss_pred EEEECCCCcEEEEEEEecCCCCCCCCCc-EEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC---CC
Q 013268 40 LEIRNARGHVLQCSHYMPSPFPEDTPLP-CVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS---LG 115 (446)
Q Consensus 40 v~~~~~dG~~L~~~~~~P~~~~~~~~~p-~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~---~~ 115 (446)
..+...||..+.+..|.. .++.+ .|+...+.+-....|+.++..++++||.|+++||||.|.|...... ..
T Consensus 8 ~~l~~~DG~~l~~~~~pA-----~~~~~g~~~va~a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~ 82 (281)
T COG4757 8 AHLPAPDGYSLPGQRFPA-----DGKASGRLVVAGATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWR 82 (281)
T ss_pred cccccCCCccCccccccC-----CCCCCCcEEecccCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccc
Confidence 567789999999998853 23444 5555566666667788899999999999999999999999743322 22
Q ss_pred cc--hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeC------CccCHHHHHH---------H
Q 013268 116 WH--EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS------AFSDLFDLML---------E 178 (446)
Q Consensus 116 ~~--~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~s------p~~~~~~~~~---------~ 178 (446)
+. ...|+.++++++++..+..+...+|||+||.+.-.+. +++.+.+....+ +.......+. .
T Consensus 83 ~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p 161 (281)
T COG4757 83 YLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHPKYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGP 161 (281)
T ss_pred hhhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCcccceeeEeccccccccchhhhhcccceeecccccc
Confidence 22 2678999999999987778999999999998765543 444433322221 1111111000 0
Q ss_pred HHHHHhhhCCc--------hhHHHHHHHHHHHHhhh-hcccccc-cchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHH
Q 013268 179 LVDVYKIRLPK--------FTVKMAVQYMRRVIQKK-AKFDIMD-LNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFN 248 (446)
Q Consensus 179 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~ 248 (446)
.+..+....|+ .+...+. -.++..+.. ..++... .+..+..+++.+|++++...+|+.+|+...+.+..
T Consensus 162 ~lt~w~g~~p~~l~G~G~d~p~~v~R-dW~RwcR~p~y~fddp~~~~~~q~yaaVrtPi~~~~~~DD~w~P~As~d~f~~ 240 (281)
T COG4757 162 PLTFWKGYMPKDLLGLGSDLPGTVMR-DWARWCRHPRYYFDDPAMRNYRQVYAAVRTPITFSRALDDPWAPPASRDAFAS 240 (281)
T ss_pred chhhccccCcHhhcCCCccCcchHHH-HHHHHhcCccccccChhHhHHHHHHHHhcCceeeeccCCCCcCCHHHHHHHHH
Confidence 01111111111 1111111 112222211 1111111 12345567899999999999999999999999888
Q ss_pred HcCC-CcEEEEeC---C--CCCCC--Ch-hHHHHHHHHHH
Q 013268 249 AYAG-DKNIIKFD---G--DHNSS--RP-QFYYDSVSIFF 279 (446)
Q Consensus 249 ~l~~-~~~~~~~~---g--gH~~~--~~-~~~~~~i~~Fl 279 (446)
...+ ..+.+.++ + ||+-. ++ |.+.+++++|+
T Consensus 241 ~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 241 FYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred hhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 7764 22333332 2 89855 33 77778877775
No 106
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.35 E-value=4.8e-11 Score=110.46 Aligned_cols=175 Identities=15% Similarity=0.122 Sum_probs=123.1
Q ss_pred EEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHh
Q 013268 52 CSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRG 131 (446)
Q Consensus 52 ~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~ 131 (446)
..++.|. ..+..|+|||+||+.-....|..+.+.++++||.|+.+|+...+... ...+++++.++++|+.+
T Consensus 6 l~v~~P~---~~g~yPVv~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~------~~~~~~~~~~vi~Wl~~ 76 (259)
T PF12740_consen 6 LLVYYPS---SAGTYPVVLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPD------DTDEVASAAEVIDWLAK 76 (259)
T ss_pred eEEEecC---CCCCcCEEEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCC------cchhHHHHHHHHHHHHh
Confidence 3467787 56789999999999977777889999999999999999976533211 12347889999999877
Q ss_pred cC----------CCCcEEEEEechhHHHHHHHHHhC-----C-CccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHH
Q 013268 132 NK----------QTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMA 195 (446)
Q Consensus 132 ~~----------~~~~i~lvG~S~GG~ial~~a~~~-----p-~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (446)
.. +..+++|.|||-||-+|..++..+ + .++++|++.|....... ....|..
T Consensus 77 ~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVdG~~~~--------~~~~P~v----- 143 (259)
T PF12740_consen 77 GLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVDGMSKG--------SQTEPPV----- 143 (259)
T ss_pred cchhhccccccccccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEeccccccccc--------cCCCCcc-----
Confidence 42 236899999999999999998886 2 38999999998742110 0000100
Q ss_pred HHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCC---------CCChH-HHHHHHHHcCCCcEEEEeCC-CCC
Q 013268 196 VQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDK---------FIRAR-HSDLIFNAYAGDKNIIKFDG-DHN 264 (446)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~---------~vp~~-~~~~l~~~l~~~~~~~~~~g-gH~ 264 (446)
. ......-+..+|+++|...-+. ..|.. +-.++++.++.+.-.++..+ ||.
T Consensus 144 ----------------~--~~~p~s~~~~~P~lviGtGLg~~~~~~~~~~CaP~g~n~~~Ff~~~~~p~~~~v~~~~GH~ 205 (259)
T PF12740_consen 144 ----------------L--TYTPQSFDFSMPALVIGTGLGGEPRNPLFPPCAPAGVNYREFFDECKPPSWHFVAKDYGHM 205 (259)
T ss_pred ----------------c--cCcccccCCCCCeEEEecccCcccccccCCCCCCCCCCHHHHHHhcCCCEEEEEeCCCCch
Confidence 0 0111222355899999877774 23332 56788888887666666666 998
Q ss_pred CC
Q 013268 265 SS 266 (446)
Q Consensus 265 ~~ 266 (446)
.+
T Consensus 206 d~ 207 (259)
T PF12740_consen 206 DF 207 (259)
T ss_pred Hh
Confidence 55
No 107
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=99.31 E-value=7.1e-11 Score=104.88 Aligned_cols=180 Identities=18% Similarity=0.239 Sum_probs=125.4
Q ss_pred CCCcEEEEECCCCCChhhHHH----HHHHhccCCcEEEEeCCCCC----CCC--CC-----CCc-----CCCcch-----
Q 013268 64 TPLPCVVYCHGNSGCRADANE----AAVILLPSNITLFTLDFSGS----GLS--DG-----DYV-----SLGWHE----- 118 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~----~~~~L~~~Gy~Vi~~D~~G~----G~S--~~-----~~~-----~~~~~~----- 118 (446)
..++-||++||+-.+...+.. +...+.+. +..+.+|-|-- +.+ .+ .+. ..+|..
T Consensus 3 ~~k~rvLcLHGfrQsg~~F~~Ktg~~rK~l~k~-~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~ 81 (230)
T KOG2551|consen 3 QKKLRVLCLHGFRQSGKVFSEKTGSLRKLLKKL-AELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEAS 81 (230)
T ss_pred CCCceEEEecchhhccHHHHHHhhhHHHHHHhh-heEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccc
Confidence 356889999999988776653 33444444 77777777721 111 11 000 122221
Q ss_pred -------HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHh---------CCCccEEEEeCCccCHHHHHHHHHHH
Q 013268 119 -------KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDV 182 (446)
Q Consensus 119 -------~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~---------~p~v~~lVl~sp~~~~~~~~~~~~~~ 182 (446)
-+.+..+.+|+.++...+ +|+|+|.|+.++..++.. .|.++-+|+++++.......
T Consensus 82 ~~~~~~~eesl~yl~~~i~enGPFD--GllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~~~~~------ 153 (230)
T KOG2551|consen 82 FTEYFGFEESLEYLEDYIKENGPFD--GLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFPSKKL------ 153 (230)
T ss_pred cccccChHHHHHHHHHHHHHhCCCc--cccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCCcchh------
Confidence 123556666666664444 799999999999888872 34478999998875421100
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCC
Q 013268 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGD 262 (446)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~gg 262 (446)
+-....+.+++|.|.|.|+.|.+++...+..|++.+.+. .++.-+||
T Consensus 154 --------------------------------~~~~~~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a-~vl~Hpgg 200 (230)
T KOG2551|consen 154 --------------------------------DESAYKRPLSTPSLHIFGETDTIVPSERSEQLAESFKDA-TVLEHPGG 200 (230)
T ss_pred --------------------------------hhhhhccCCCCCeeEEecccceeecchHHHHHHHhcCCC-eEEecCCC
Confidence 111334578899999999999999999999999999866 67778899
Q ss_pred CCCCChhHHHHHHHHHHHhhcCC
Q 013268 263 HNSSRPQFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 263 H~~~~~~~~~~~i~~Fl~~~L~~ 285 (446)
|..++...+.+.|.+||...+..
T Consensus 201 H~VP~~~~~~~~i~~fi~~~~~~ 223 (230)
T KOG2551|consen 201 HIVPNKAKYKEKIADFIQSFLQE 223 (230)
T ss_pred ccCCCchHHHHHHHHHHHHHHHh
Confidence 99998889999999999887653
No 108
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.29 E-value=1.4e-11 Score=93.91 Aligned_cols=63 Identities=25% Similarity=0.368 Sum_probs=56.6
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC
Q 013268 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS 113 (446)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~ 113 (446)
|.+|.++.|.|+ . +++.+|+++||++.+...|..+++.|+++||.|+++|+||||.|.+....
T Consensus 1 G~~L~~~~w~p~---~-~~k~~v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~ 63 (79)
T PF12146_consen 1 GTKLFYRRWKPE---N-PPKAVVVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGH 63 (79)
T ss_pred CcEEEEEEecCC---C-CCCEEEEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccc
Confidence 678999999986 2 27899999999999999999999999999999999999999999975543
No 109
>COG4099 Predicted peptidase [General function prediction only]
Probab=99.28 E-value=5e-11 Score=109.56 Aligned_cols=161 Identities=19% Similarity=0.266 Sum_probs=106.5
Q ss_pred CCCcEEEEEEEecCCCCCCCCC-cEEEEECCCCCChhhHHH-HHH-------HhccCCcEEEEeCCCC-CCCCCCCCcCC
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPL-PCVVYCHGNSGCRADANE-AAV-------ILLPSNITLFTLDFSG-SGLSDGDYVSL 114 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~-p~VVllHG~g~~~~~~~~-~~~-------~L~~~Gy~Vi~~D~~G-~G~S~~~~~~~ 114 (446)
.-|..|.|++|.|++...+++. |.|||+||.|....+-.. +.. ..-+.++-|+++.+-- +-.++....
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~-- 246 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTL-- 246 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccc--
Confidence 5689999999999876666665 999999999965543322 111 1112234555555321 111111110
Q ss_pred CcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchh
Q 013268 115 GWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFT 191 (446)
Q Consensus 115 ~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~ 191 (446)
.. -..-+..+.+.+.+++++ +||.++|.|+||+.++.++.++|+ +.+.+++++-.+-...
T Consensus 247 ~~-l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d~v~l---------------- 309 (387)
T COG4099 247 LY-LIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGDRVYL---------------- 309 (387)
T ss_pred hh-HHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCchhhh----------------
Confidence 00 012222333366777776 799999999999999999999999 8999988876541100
Q ss_pred HHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC
Q 013268 192 VKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA 251 (446)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~ 251 (446)
...+ -++|+.++|+.+|+++|.++++-+++.++
T Consensus 310 -------------------------v~~l--k~~piWvfhs~dDkv~Pv~nSrv~y~~lk 342 (387)
T COG4099 310 -------------------------VRTL--KKAPIWVFHSSDDKVIPVSNSRVLYERLK 342 (387)
T ss_pred -------------------------hhhh--ccCceEEEEecCCCccccCcceeehHHHH
Confidence 0111 13699999999999999999988887766
No 110
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.22 E-value=1.1e-10 Score=116.93 Aligned_cols=108 Identities=11% Similarity=0.066 Sum_probs=80.4
Q ss_pred CCCcEEEEECCCCCCh--hhHHH-HHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCc-chHHHHHHHHHHHHhcCC--C
Q 013268 64 TPLPCVVYCHGNSGCR--ADANE-AAVILLP--SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYLRGNKQ--T 135 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~--~~~~~-~~~~L~~--~Gy~Vi~~D~~G~G~S~~~~~~~~~-~~~~D~~~~i~~l~~~~~--~ 135 (446)
...|++|++||++.+. ..|.. ++..|.. .+|+|+++|++|+|.+......... ...+++.+++++|.+..+ .
T Consensus 39 ~~~ptvIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l 118 (442)
T TIGR03230 39 HETKTFIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPW 118 (442)
T ss_pred CCCCeEEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCC
Confidence 4579999999998653 34554 5555542 3699999999999987633211111 124677888888865443 5
Q ss_pred CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 136 SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 136 ~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
++++|+||||||.+|..++...|. |.+++++.|...
T Consensus 119 ~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 119 DNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred CcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 899999999999999999998887 999999988654
No 111
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.19 E-value=6.4e-10 Score=98.15 Aligned_cols=148 Identities=19% Similarity=0.212 Sum_probs=91.6
Q ss_pred EEEECCCCCCh-hhHHHH-HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEec
Q 013268 69 VVYCHGNSGCR-ADANEA-AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRS 144 (446)
Q Consensus 69 VVllHG~g~~~-~~~~~~-~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S 144 (446)
|+++||++++. ..|... .+.+... ++|-.+++- .-++.+.+..|.+.... ++++++|||
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~-~~V~~~~~~----------------~P~~~~W~~~l~~~i~~~~~~~ilVaHS 63 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENS-VRVEQPDWD----------------NPDLDEWVQALDQAIDAIDEPTILVAHS 63 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTS-EEEEEC--T----------------S--HHHHHHHHHHCCHC-TTTEEEEEET
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCC-eEEeccccC----------------CCCHHHHHHHHHHHHhhcCCCeEEEEeC
Confidence 68999999874 446554 4556554 788777761 12344455555554332 679999999
Q ss_pred hhHHHHHHHHH-hCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC
Q 013268 145 MGAVTSLLYGA-EDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK 222 (446)
Q Consensus 145 ~GG~ial~~a~-~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 222 (446)
+|+..++.+++ .... |+|+++++|+..... ....+. ...+.. .....
T Consensus 64 LGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~---------~~~~~~----------------~~~f~~------~p~~~ 112 (171)
T PF06821_consen 64 LGCLTALRWLAEQSQKKVAGALLVAPFDPDDP---------EPFPPE----------------LDGFTP------LPRDP 112 (171)
T ss_dssp HHHHHHHHHHHHTCCSSEEEEEEES--SCGCH---------HCCTCG----------------GCCCTT------SHCCH
T ss_pred HHHHHHHHHHhhcccccccEEEEEcCCCcccc---------cchhhh----------------cccccc------Ccccc
Confidence 99999999994 4444 999999999865200 000000 000100 11122
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 013268 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (446)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~ 266 (446)
+.+|.+++.+++|+.+|++.++.+.+.+. .+++.+++ ||+..
T Consensus 113 l~~~~~viaS~nDp~vp~~~a~~~A~~l~--a~~~~~~~~GHf~~ 155 (171)
T PF06821_consen 113 LPFPSIVIASDNDPYVPFERAQRLAQRLG--AELIILGGGGHFNA 155 (171)
T ss_dssp HHCCEEEEEETTBSSS-HHHHHHHHHHHT---EEEEETS-TTSSG
T ss_pred cCCCeEEEEcCCCCccCHHHHHHHHHHcC--CCeEECCCCCCccc
Confidence 34677999999999999999999999996 45777776 99965
No 112
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.19 E-value=7.6e-10 Score=100.52 Aligned_cols=179 Identities=14% Similarity=0.102 Sum_probs=123.6
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHH
Q 013268 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVS 127 (446)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~ 127 (446)
......++.|. ..+..|+|+|+||+.-....|..+...++++||.|+++++-..- . ..+..++++..++++
T Consensus 31 pPkpLlI~tP~---~~G~yPVilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~--~----p~~~~Ei~~aa~V~~ 101 (307)
T PF07224_consen 31 PPKPLLIVTPS---EAGTYPVILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLF--P----PDGQDEIKSAASVIN 101 (307)
T ss_pred CCCCeEEecCC---cCCCccEEEEeechhhhhHHHHHHHHHHhhcCeEEEechhhccc--C----CCchHHHHHHHHHHH
Confidence 44566678887 67899999999999988888999999999999999999997421 1 234466899999999
Q ss_pred HHHhcC----------CCCcEEEEEechhHHHHHHHHHhCC-C--ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHH
Q 013268 128 YLRGNK----------QTSRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM 194 (446)
Q Consensus 128 ~l~~~~----------~~~~i~lvG~S~GG~ial~~a~~~p-~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (446)
|+.+.+ +..+++++|||.||-+|..+|..+. + +.++|.+.|....... ....|..
T Consensus 102 WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~G~~k~--------~~t~P~i---- 169 (307)
T PF07224_consen 102 WLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVAGTSKG--------KQTPPPI---- 169 (307)
T ss_pred HHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccCCCCCC--------CCCCCCe----
Confidence 998762 2378999999999999999998774 3 7888877776553211 0011111
Q ss_pred HHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCC----CC---CChH--HHHHHHHHcCCCcEEEEeCC-CCC
Q 013268 195 AVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASED----KF---IRAR--HSDLIFNAYAGDKNIIKFDG-DHN 264 (446)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D----~~---vp~~--~~~~l~~~l~~~~~~~~~~g-gH~ 264 (446)
. ......-.+.+|+++|...-- .. +.+. +=++++...+......+... ||.
T Consensus 170 -----------------L--ty~p~SF~l~iPv~VIGtGLg~~~~~~~~~CaP~gvnH~eFf~eCk~p~~hfV~~dYGHm 230 (307)
T PF07224_consen 170 -----------------L--TYVPQSFDLDIPVLVIGTGLGPKRNPLFPPCAPDGVNHEEFFNECKPPCAHFVAKDYGHM 230 (307)
T ss_pred -----------------e--ecCCcccccCCceEEEecCcCccccCCCCCCCCCCcCHHHHHHhhcccceeeeecccccc
Confidence 0 000111245689999876544 12 2222 34677777776554444455 998
Q ss_pred CC
Q 013268 265 SS 266 (446)
Q Consensus 265 ~~ 266 (446)
.+
T Consensus 231 Dm 232 (307)
T PF07224_consen 231 DM 232 (307)
T ss_pred cc
Confidence 55
No 113
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.19 E-value=2e-09 Score=99.80 Aligned_cols=207 Identities=12% Similarity=0.124 Sum_probs=116.9
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechh
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~G 146 (446)
++|+++||.+|+...|..+++.+....+.|+.++++|.+... ....+. .+-+...++.++.....+++.|+|||+|
T Consensus 1 ~~lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~--~~~~si--~~la~~y~~~I~~~~~~gp~~L~G~S~G 76 (229)
T PF00975_consen 1 RPLFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDE--PPPDSI--EELASRYAEAIRARQPEGPYVLAGWSFG 76 (229)
T ss_dssp -EEEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTS--HEESSH--HHHHHHHHHHHHHHTSSSSEEEEEETHH
T ss_pred CeEEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCC--CCCCCH--HHHHHHHHHHhhhhCCCCCeeehccCcc
Confidence 479999999999999999999997755999999999998222 111221 2233445566666655569999999999
Q ss_pred HHHHHHHHHhC----CCccEEEEeCCccCH-HH--H--------HHHHHHHHhhhCC-chhHH-HHHHHHHHHHhhhhcc
Q 013268 147 AVTSLLYGAED----PSIAGMVLDSAFSDL-FD--L--------MLELVDVYKIRLP-KFTVK-MAVQYMRRVIQKKAKF 209 (446)
Q Consensus 147 G~ial~~a~~~----p~v~~lVl~sp~~~~-~~--~--------~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 209 (446)
|.+|..+|.+- ..+..++++.+.... .. . ............. ..... ....++..........
T Consensus 77 g~lA~E~A~~Le~~G~~v~~l~liD~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (229)
T PF00975_consen 77 GILAFEMARQLEEAGEEVSRLILIDSPPPSIKERPRSREPSDEQFIEELRRIGGTPDASLEDEELLARLLRALRDDFQAL 156 (229)
T ss_dssp HHHHHHHHHHHHHTT-SESEEEEESCSSTTCHSCHHHHHCHHHHHHHHHHHHCHHHHHHCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCceEEecCCCCCcccchhhhhhhHHHHHHHHHHhcCCchhhhcCHHHHHHHHHHHHHHHHHH
Confidence 99999998762 238888888744321 10 0 1111111110000 00000 0111111111111000
Q ss_pred cccccchhhhCCCCCCcEEEEEeCCCCCCChH---HHHHHHHHcCCCcEEEEeCCCCCCCChhHHHHHHHHHHHh
Q 013268 210 DIMDLNCLKLAPKTFIPALFGHASEDKFIRAR---HSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYN 281 (446)
Q Consensus 210 ~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~---~~~~l~~~l~~~~~~~~~~ggH~~~~~~~~~~~i~~Fl~~ 281 (446)
.. .. ......-.+|.++.....|+..... ....+.+......+++.++|+|+.+-. .....|.+++.+
T Consensus 157 ~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~v~G~H~~~l~-~~~~~i~~~I~~ 227 (229)
T PF00975_consen 157 EN--YS-IRPIDKQKVPITLFYALDDPLVSMDRLEEADRWWDYTSGDVEVHDVPGDHFSMLK-PHVAEIAEKIAE 227 (229)
T ss_dssp HT--CS--TTSSSESSEEEEEEECSSSSSSHHCGGHHCHHHGCBSSSEEEEEESSETTGHHS-TTHHHHHHHHHH
T ss_pred hh--cc-CCccccCCCcEEEEecCCCccccchhhhhHHHHHHhcCCCcEEEEEcCCCcEecc-hHHHHHHHHHhc
Confidence 00 00 0111111467899999999988766 233345555567789999999997722 223444444443
No 114
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=99.19 E-value=2.1e-11 Score=116.87 Aligned_cols=220 Identities=19% Similarity=0.149 Sum_probs=134.2
Q ss_pred eEEEEEECC-CCcEEEEEEEecCCCCC---CCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCC--CCCCC
Q 013268 37 RQDLEIRNA-RGHVLQCSHYMPSPFPE---DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSG--LSDGD 110 (446)
Q Consensus 37 ~~~v~~~~~-dG~~L~~~~~~P~~~~~---~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G--~S~~~ 110 (446)
...+.+... ++..+...+|.|..... ....|+||+-||.|+....+..+++.|++.||.|.++|++|.- .....
T Consensus 38 ~~~i~~~~~~r~~~~~v~~~~p~~~~~~~~~~~~PlvvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~ 117 (365)
T COG4188 38 FVTITLNDPQRDRERPVDLRLPQGGTGTVALYLLPLVVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAA 117 (365)
T ss_pred EEEEeccCcccCCccccceeccCCCccccccCcCCeEEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChh
Confidence 455555554 37788888898875211 1378999999999999999999999999999999999999852 22211
Q ss_pred CcC-------CCcchHHHHHHHHHHHHhc---C------CCCcEEEEEechhHHHHHHHHHhCCCcc-----EE----EE
Q 013268 111 YVS-------LGWHEKDDLKVVVSYLRGN---K------QTSRIGLWGRSMGAVTSLLYGAEDPSIA-----GM----VL 165 (446)
Q Consensus 111 ~~~-------~~~~~~~D~~~~i~~l~~~---~------~~~~i~lvG~S~GG~ial~~a~~~p~v~-----~l----Vl 165 (446)
... ..+....|+..++++|.+. . +..+|+++|||+||+.++.++....+.. |. +.
T Consensus 118 ~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~~~ld~~~Vgv~GhS~GG~T~m~laGA~~~~~~~~~~C~~~~~~~ 197 (365)
T COG4188 118 YAGPGSYAPAEWWERPLDISALLDALLQLTASPALAGRLDPQRVGVLGHSFGGYTAMELAGAELDAEALLQHCESASRIC 197 (365)
T ss_pred hcCCcccchhhhhcccccHHHHHHHHHHhhcCcccccccCccceEEEecccccHHHHHhccccccHHHHHHHhhhhhhcc
Confidence 111 1234478899999988877 2 2378999999999999999887655411 11 11
Q ss_pred eC-CccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccccc---cc-chhhhCCCCCCcEEEEEeCCCCCCCh
Q 013268 166 DS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIM---DL-NCLKLAPKTFIPALFGHASEDKFIRA 240 (446)
Q Consensus 166 ~s-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~l~~i~~PvLii~G~~D~~vp~ 240 (446)
.. +..+........ ....+... .++-...+ +..+... .. --...+.++++|++++.|..|.+.|+
T Consensus 198 ~~~~~~~~~~l~q~~----av~~~~~~----~~~rDpri--ravvA~~p~~~~~Fg~tgl~~v~~P~~~~a~s~D~~aP~ 267 (365)
T COG4188 198 LDPPGLNGRLLNQCA----AVWLPRQA----YDLRDPRI--RAVVAINPALGMIFGTTGLVKVTDPVLLAAGSADGFAPP 267 (365)
T ss_pred cCCCCcChhhhcccc----ccccchhh----hccccccc--eeeeeccCCcccccccccceeeecceeeecccccccCCc
Confidence 11 111111111000 00011000 00000000 0000000 00 01345678999999999999998776
Q ss_pred H-HHHHHHHHcCCC-cEEEEeCC-CCCCC
Q 013268 241 R-HSDLIFNAYAGD-KNIIKFDG-DHNSS 266 (446)
Q Consensus 241 ~-~~~~l~~~l~~~-~~~~~~~g-gH~~~ 266 (446)
. .....+..+++. +.+..+++ .|+..
T Consensus 268 ~~~~~~~f~~l~g~~k~~~~vp~a~h~sf 296 (365)
T COG4188 268 VTEQIRPFGYLPGALKYLRLVPGATHFSF 296 (365)
T ss_pred ccccccccccCCcchhheeecCCCccccc
Confidence 5 556666677754 55666666 89865
No 115
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=99.18 E-value=1.8e-11 Score=112.32 Aligned_cols=165 Identities=18% Similarity=0.231 Sum_probs=88.5
Q ss_pred HHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHH
Q 013268 119 KDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAV 196 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (446)
.+.+..+++||+++..+ ++|+|+|.|.||-+|+.+|+.+|+|+++|+++|..-........... ...+|..+.....
T Consensus 3 LEyfe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~i~avVa~~ps~~~~~~~~~~~~~-~~~lp~~~~~~~~ 81 (213)
T PF08840_consen 3 LEYFEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQISAVVAISPSSVVFQGIGFYRDS-SKPLPYLPFDISK 81 (213)
T ss_dssp CHHHHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSSEEEEEEES--SB--SSEEEETTE---EE----B-GGG
T ss_pred hHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCCccEEEEeCCceeEecchhcccCC-CccCCcCCcChhh
Confidence 36788999999999776 69999999999999999999999999999988765332100000000 0011111110000
Q ss_pred H--HHHHHHhhhhcccccccc----hhhhCCCCCCcEEEEEeCCCCCCChHH-HHHHHHHcCC-----CcEEEEeCC-CC
Q 013268 197 Q--YMRRVIQKKAKFDIMDLN----CLKLAPKTFIPALFGHASEDKFIRARH-SDLIFNAYAG-----DKNIIKFDG-DH 263 (446)
Q Consensus 197 ~--~~~~~~~~~~~~~~~~~~----~~~~l~~i~~PvLii~G~~D~~vp~~~-~~~l~~~l~~-----~~~~~~~~g-gH 263 (446)
. ...........+...... ..-.+.++++|+|+|.|++|.+.|... ++.+.+++.. ..+++.|++ ||
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~a~IpvE~i~~piLli~g~dD~~WpS~~~a~~i~~rL~~~~~~~~~~~l~Y~~aGH 161 (213)
T PF08840_consen 82 FSWNEPGLLRSRYAFELADDKAVEEARIPVEKIKGPILLISGEDDQIWPSSEMAEQIEERLKAAGFPHNVEHLSYPGAGH 161 (213)
T ss_dssp -EE-TTS-EE-TT-B--TTTGGGCCCB--GGG--SEEEEEEETT-SSS-HHHHHHHHHHHHHCTT-----EEEEETTB-S
T ss_pred ceecCCcceehhhhhhcccccccccccccHHHcCCCEEEEEeCCCCccchHHHHHHHHHHHHHhCCCCcceEEEcCCCCc
Confidence 0 000000000001101001 111355789999999999999998764 4455555542 357788888 99
Q ss_pred CCCC------------------------------hhHHHHHHHHHHHhhcC
Q 013268 264 NSSR------------------------------PQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 264 ~~~~------------------------------~~~~~~~i~~Fl~~~L~ 284 (446)
...- .++.+..+++||+++|.
T Consensus 162 ~i~~Py~P~~~~~~~~~~~~~~~~GG~~~~~a~A~~dsW~~~l~Fl~~~L~ 212 (213)
T PF08840_consen 162 LIEPPYFPHCRASYHKFIGTPLAWGGEPEAHAKAQEDSWKKILEFLRKHLG 212 (213)
T ss_dssp ---STT-----EEEETTTTEEEE--B-HHHHHHHHHHHHHHHHHHHHHH--
T ss_pred eecCCCCCCcccccccccCCcccCCCChHHHHHHHHHHHHHHHHHHHHHhC
Confidence 8420 13567889999999985
No 116
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.18 E-value=2.5e-09 Score=106.04 Aligned_cols=246 Identities=15% Similarity=0.099 Sum_probs=138.1
Q ss_pred ccCCCceeeE-EEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH-HHHHHHhccCCcEEEEeCCCCCCC
Q 013268 29 MLAGRSYKRQ-DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGL 106 (446)
Q Consensus 29 ~~~~~~~~~~-~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~-~~~~~~L~~~Gy~Vi~~D~~G~G~ 106 (446)
...|..+... ++.+. .+-.+| ++|.|.........|.||++..+.+..... +.+++.|.+ |+.|+..|+..-+.
T Consensus 67 ~~~~~~~~v~e~vV~~-~~~~~L--~~y~~~~~~~~~~~~pvLiV~Pl~g~~~~L~RS~V~~Ll~-g~dVYl~DW~~p~~ 142 (406)
T TIGR01849 67 EVDGKDVPIRERVVWD-KPFCRL--IHFKRQGFRAELPGPAVLIVAPMSGHYATLLRSTVEALLP-DHDVYITDWVNARM 142 (406)
T ss_pred EECCEEeeeEEEEEEE-CCCeEE--EEECCCCcccccCCCcEEEEcCCchHHHHHHHHHHHHHhC-CCcEEEEeCCCCCC
Confidence 4455554433 34343 333333 356664211112247899998888765544 467889998 99999999987663
Q ss_pred CCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC-----CC-ccEEEEeCCccCHHH---HHH
Q 013268 107 SDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----PS-IAGMVLDSAFSDLFD---LML 177 (446)
Q Consensus 107 S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~-----p~-v~~lVl~sp~~~~~~---~~~ 177 (446)
.+.....++ .+|+...+....+..+.+ +.++|+|+||.+++.+++.. |. ++.+++++++.+... .+.
T Consensus 143 vp~~~~~f~---ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~~~~p~~v~ 218 (406)
T TIGR01849 143 VPLSAGKFD---LEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDARASPTVVN 218 (406)
T ss_pred CchhcCCCC---HHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccCCCCCchHH
Confidence 321112222 233332322222333545 99999999999977666653 44 899999887665322 111
Q ss_pred HH--------HH-HH-----------h-hhCCchhH-------------HHHHHHHHHHHhhh-------h-c----ccc
Q 013268 178 EL--------VD-VY-----------K-IRLPKFTV-------------KMAVQYMRRVIQKK-------A-K----FDI 211 (446)
Q Consensus 178 ~~--------~~-~~-----------~-~~~~~~~~-------------~~~~~~~~~~~~~~-------~-~----~~~ 211 (446)
.+ .. .. + ..+|.+.. ....+++....... . . .+.
T Consensus 219 ~~a~~~~i~~~~~~~i~~vp~~~~g~gr~v~PG~~~~~~F~~mnp~r~~~~~~~~~~~l~~gd~~~~~~~~~f~~~y~d~ 298 (406)
T TIGR01849 219 ELAREKPIEWFQHNVIMRVPFPYPGAGRLVYPGFLQLAGFISMNLDRHTKAHSDFFLHLVKGDGQEADKHRIFYDEYLAV 298 (406)
T ss_pred HHhhcccHHHHHHHhhhccCccccCCCCcccCHHHHHHHHHHcCcchHHHHHHHHHHHHhcCCcchHHHHHHHHHHhhhc
Confidence 11 11 00 0 01222111 01111111111000 0 0 000
Q ss_pred ccc--------------------------chhhhCCCCC-CcEEEEEeCCCCCCChHHHHHHHHHc---C-CCcEEEEe-
Q 013268 212 MDL--------------------------NCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAY---A-GDKNIIKF- 259 (446)
Q Consensus 212 ~~~--------------------------~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l---~-~~~~~~~~- 259 (446)
.++ ...-.+++|+ +|+|.+.|++|.++++..+..+.+.+ + ..++.+..
T Consensus 299 ~dlpge~y~~~v~~vf~~n~L~~G~l~v~G~~Vdl~~I~~~pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k~~~~~~ 378 (406)
T TIGR01849 299 MDMTAEFYLQTIDVVFQQFLLPQGKFIVEGKRVDPGAITRVALLTVEGENDDISGLGQTKAALRLCTGIPEDMKRHHLQP 378 (406)
T ss_pred cCCcHHHHHHHHHHHHHhCCccCCcEEECCEEecHHHCcccceEEEeccCCCcCCHHHhHHHHHHhhcCChhhceEeecC
Confidence 000 0112355688 99999999999999999999999875 4 34545555
Q ss_pred CCCCCCC-----ChhHHHHHHHHHHHhh
Q 013268 260 DGDHNSS-----RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 260 ~ggH~~~-----~~~~~~~~i~~Fl~~~ 282 (446)
++||... ..++++..|.+||.++
T Consensus 379 ~~GH~Gvf~G~r~~~~i~P~i~~wl~~~ 406 (406)
T TIGR01849 379 GVGHYGVFSGSRFREEIYPLVREFIRRN 406 (406)
T ss_pred CCCeEEEeeChhhhhhhchHHHHHHHhC
Confidence 5699844 5678889999999753
No 117
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.18 E-value=2.7e-09 Score=89.63 Aligned_cols=164 Identities=15% Similarity=0.146 Sum_probs=112.4
Q ss_pred CCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCC----CCCcCCCcchHHHHHHHHHHHHhcCCCCc
Q 013268 64 TPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSD----GDYVSLGWHEKDDLKVVVSYLRGNKQTSR 137 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~----~~~~~~~~~~~~D~~~~i~~l~~~~~~~~ 137 (446)
...-+||+.||.|.+.+ .+...+..|+.+|+.|..|+++..-... .++...+ .-......++..++......+
T Consensus 12 ~~~~tilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~-t~~~~~~~~~aql~~~l~~gp 90 (213)
T COG3571 12 PAPVTILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSG-TLNPEYIVAIAQLRAGLAEGP 90 (213)
T ss_pred CCCEEEEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccc-cCCHHHHHHHHHHHhcccCCc
Confidence 44457899999997654 4667888999999999999998653221 1111111 112445556667777766689
Q ss_pred EEEEEechhHHHHHHHHHhCC-CccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccch
Q 013268 138 IGLWGRSMGAVTSLLYGAEDP-SIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNC 216 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p-~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (446)
+++-|+||||-++..++..-. +|+++++++-++. .|..+.+ -.
T Consensus 91 Li~GGkSmGGR~aSmvade~~A~i~~L~clgYPfh---------------ppGKPe~---------------------~R 134 (213)
T COG3571 91 LIIGGKSMGGRVASMVADELQAPIDGLVCLGYPFH---------------PPGKPEQ---------------------LR 134 (213)
T ss_pred eeeccccccchHHHHHHHhhcCCcceEEEecCccC---------------CCCCccc---------------------ch
Confidence 999999999999988877644 3999998764332 1221111 11
Q ss_pred hhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 013268 217 LKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (446)
Q Consensus 217 ~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~ 266 (446)
...+..+++|+||.+|+.|.+-..+.... -.+....+++++.+ +|..-
T Consensus 135 t~HL~gl~tPtli~qGtrD~fGtr~~Va~--y~ls~~iev~wl~~adHDLk 183 (213)
T COG3571 135 TEHLTGLKTPTLITQGTRDEFGTRDEVAG--YALSDPIEVVWLEDADHDLK 183 (213)
T ss_pred hhhccCCCCCeEEeecccccccCHHHHHh--hhcCCceEEEEeccCccccc
Confidence 25677889999999999999987775522 23456778888887 88743
No 118
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=99.18 E-value=1.5e-10 Score=114.97 Aligned_cols=178 Identities=20% Similarity=0.264 Sum_probs=99.0
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCC------CCC---C-------cC-----CC-c--c--
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLS------DGD---Y-------VS-----LG-W--H-- 117 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S------~~~---~-------~~-----~~-~--~-- 117 (446)
++.|+|||.||+++++..|..++..|+++||.|+++|+|..-.. ++. . .. .. . .
T Consensus 98 ~~~PvvIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (379)
T PF03403_consen 98 GKFPVVIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEE 177 (379)
T ss_dssp S-EEEEEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGH
T ss_pred CCCCEEEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhH
Confidence 67899999999999999999999999999999999999943211 100 0 00 00 0 0
Q ss_pred ----------hHHHHHHHHHHHHh----------------------cCCCCcEEEEEechhHHHHHHHHHhCCCccEEEE
Q 013268 118 ----------EKDDLKVVVSYLRG----------------------NKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVL 165 (446)
Q Consensus 118 ----------~~~D~~~~i~~l~~----------------------~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl 165 (446)
-..++..+++.|.+ +.+.++|+++|||+||..++.++....++++.|+
T Consensus 178 ~~~R~~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d~r~~~~I~ 257 (379)
T PF03403_consen 178 FELRNAQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQDTRFKAGIL 257 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH-TT--EEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhccCcceEEE
Confidence 03345566666643 1123679999999999999999999988999998
Q ss_pred eCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHH
Q 013268 166 DSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDL 245 (446)
Q Consensus 166 ~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~ 245 (446)
+.|+.-. .. + ....+++.|+|+|+.+. +.-......
T Consensus 258 LD~W~~P----------------l~------------------------~--~~~~~i~~P~L~InSe~--f~~~~~~~~ 293 (379)
T PF03403_consen 258 LDPWMFP----------------LG------------------------D--EIYSKIPQPLLFINSES--FQWWENIFR 293 (379)
T ss_dssp ES---TT----------------S-------------------------G--GGGGG--S-EEEEEETT--T--HHHHHH
T ss_pred eCCcccC----------------CC------------------------c--ccccCCCCCEEEEECcc--cCChhhHHH
Confidence 8876421 00 0 11134678999998875 222333333
Q ss_pred HHHHc--CCCcEEEEeCC-CCCCC------C---------------h----hHHHHHHHHHHHhhcCC
Q 013268 246 IFNAY--AGDKNIIKFDG-DHNSS------R---------------P----QFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 246 l~~~l--~~~~~~~~~~g-gH~~~------~---------------~----~~~~~~i~~Fl~~~L~~ 285 (446)
+.+.. .....++.+.| .|... . | +...+.+++||+++|+.
T Consensus 294 ~~~~~~~~~~~~~~ti~gt~H~s~sD~~ll~P~~l~~~~~~~g~~dp~~a~~i~~~~~l~FL~~~L~~ 361 (379)
T PF03403_consen 294 MKKVISNNKESRMLTIKGTAHLSFSDFPLLSPWLLGKFLGLKGSIDPERALRINNRASLAFLRRHLGL 361 (379)
T ss_dssp HHTT--TTS-EEEEEETT--GGGGSGGGGTS-HHHHHHTTSS-SS-HHHHHHHHHHHHHHHHHHHHT-
T ss_pred HHHHhccCCCcEEEEECCCcCCCcchhhhhhHHHHHHHhccccCcCHHHHHHHHHHHHHHHHHHhcCC
Confidence 33322 23556778888 89732 1 2 23445678899999874
No 119
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.18 E-value=8.2e-11 Score=112.32 Aligned_cols=108 Identities=13% Similarity=0.119 Sum_probs=78.3
Q ss_pred CCCcEEEEECCCCCCh-hhHHH-HHHHhc-cCCcEEEEeCCCCCCCCCCCCcCCCcc-hHHHHHHHHHHHHhcC--CCCc
Q 013268 64 TPLPCVVYCHGNSGCR-ADANE-AAVILL-PSNITLFTLDFSGSGLSDGDYVSLGWH-EKDDLKVVVSYLRGNK--QTSR 137 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~-~~~~~-~~~~L~-~~Gy~Vi~~D~~G~G~S~~~~~~~~~~-~~~D~~~~i~~l~~~~--~~~~ 137 (446)
..+|++|++||++++. ..|.. +...+. ..+|+|+++|+++++............ ..+++..+++++.+.. +.++
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~ 113 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLEN 113 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHH
Confidence 4578999999999876 45543 444444 458999999999873322110000111 1457778888887763 3478
Q ss_pred EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
++++||||||.+|..++...|+ |++++++.|...
T Consensus 114 i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 114 VHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred EEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 9999999999999999999887 999999887754
No 120
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=99.16 E-value=1.7e-10 Score=108.83 Aligned_cols=210 Identities=21% Similarity=0.272 Sum_probs=86.6
Q ss_pred CCcEEEEECCCCCC---hhhHHHHHHHhccCCcEEEEeCCC----CCCCCCCCCcCCCcchHHHHHHHHHHHHhcC----
Q 013268 65 PLPCVVYCHGNSGC---RADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---- 133 (446)
Q Consensus 65 ~~p~VVllHG~g~~---~~~~~~~~~~L~~~Gy~Vi~~D~~----G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~---- 133 (446)
...+|||+.|.+.. ..+...+++.|...||.|+-+-++ |+|.+.- ..+++|+.++++||+...
T Consensus 32 ~~~~llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL------~~D~~eI~~~v~ylr~~~~g~~ 105 (303)
T PF08538_consen 32 APNALLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSL------DRDVEEIAQLVEYLRSEKGGHF 105 (303)
T ss_dssp SSSEEEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--H------HHHHHHHHHHHHHHHHHS----
T ss_pred CCcEEEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchh------hhHHHHHHHHHHHHHHhhcccc
Confidence 56789999999854 344677888898789999999876 4443331 134899999999999883
Q ss_pred CCCcEEEEEechhHHHHHHHHHhC------CCccEEEEeCCccCHH---------HHHHHHHHHHh----hhCCc--hhH
Q 013268 134 QTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLF---------DLMLELVDVYK----IRLPK--FTV 192 (446)
Q Consensus 134 ~~~~i~lvG~S~GG~ial~~a~~~------p~v~~lVl~sp~~~~~---------~~~~~~~~~~~----~~~~~--~~~ 192 (446)
+.++|+|+|||-|+.-++.|+... +.|+++|+-+|..+-. +.+........ ..-+. .+.
T Consensus 106 ~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa~~~~~~~~~~~~~~v~~A~~~i~~g~~~~~lp~ 185 (303)
T PF08538_consen 106 GREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREAILNFLGEREAYEELVALAKELIAEGKGDEILPR 185 (303)
T ss_dssp --S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTSTTTSHHH---HHHHHHHHHHHHHCT-TT-GG--
T ss_pred CCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhHhhhcccchHHHHHHHHHHHHHHHcCCCCceeec
Confidence 458999999999999999998874 2399999988866421 11222111110 00000 000
Q ss_pred HHHH------H-HHHHHHh--------hhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChH-HHHHHHHHcCC---C
Q 013268 193 KMAV------Q-YMRRVIQ--------KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYAG---D 253 (446)
Q Consensus 193 ~~~~------~-~~~~~~~--------~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~~---~ 253 (446)
.... . ...++.. +.+.-++.+......+.++..|+|++.+.+|..||.. .-+.+.+++.. .
T Consensus 186 ~~~~~~~~~~PiTA~Rf~SL~s~~gdDD~FSSDL~de~l~~tfG~v~~plLvl~Sg~DEyvP~~vdk~~Ll~rw~~a~~~ 265 (303)
T PF08538_consen 186 EFTPLVFYDTPITAYRFLSLASPGGDDDYFSSDLSDERLKKTFGKVSKPLLVLYSGKDEYVPPWVDKEALLERWKAATNP 265 (303)
T ss_dssp --GGTTT-SS---HHHHHT-S-SSHHHHTHHHHHTT-HHHHTGGG--S-EEEEEE--TT---------------------
T ss_pred cccccccCCCcccHHHHHhccCCCCcccccCCCCCHHHHHHHhccCCCceEEEecCCCceeccccccccccccccccccc
Confidence 0000 0 0011100 0011122223344567788899999999999999875 33445555442 1
Q ss_pred ----cEEEEeCC-CCCCCCh------hHHHHHHHHHHH
Q 013268 254 ----KNIIKFDG-DHNSSRP------QFYYDSVSIFFY 280 (446)
Q Consensus 254 ----~~~~~~~g-gH~~~~~------~~~~~~i~~Fl~ 280 (446)
..--+++| +|....+ +.+.++|..||+
T Consensus 266 ~~~s~~S~iI~GA~H~~~~~~~~~~~~~l~~rV~~fl~ 303 (303)
T PF08538_consen 266 KIWSPLSGIIPGASHNVSGPSQAEAREWLVERVVKFLK 303 (303)
T ss_dssp --------------------------------------
T ss_pred ccccccccccccccccccccccccccccccccccccCC
Confidence 12346777 8987622 246677777763
No 121
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=99.16 E-value=1.5e-09 Score=103.85 Aligned_cols=222 Identities=17% Similarity=0.205 Sum_probs=134.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCCChhhHH-HH-HHHhccCCcEEEEeCCCCCCCCCCCCcCC------------C
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-EA-AVILLPSNITLFTLDFSGSGLSDGDYVSL------------G 115 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~-~~-~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~------------~ 115 (446)
-+..+..|..- ..+.+|++|.+.|.|.+..... .+ +..|++.|+..+.+..|-||.-....... +
T Consensus 77 a~~~~~~P~~~-~~~~rp~~IhLagTGDh~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g 155 (348)
T PF09752_consen 77 ARFQLLLPKRW-DSPYRPVCIHLAGTGDHGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMG 155 (348)
T ss_pred eEEEEEECCcc-ccCCCceEEEecCCCccchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHH
Confidence 44455667532 2456899999999987543332 23 77888889999999999998765321111 1
Q ss_pred cchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC---HHH-HH------HHHHHHHh
Q 013268 116 WHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD---LFD-LM------LELVDVYK 184 (446)
Q Consensus 116 ~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~---~~~-~~------~~~~~~~~ 184 (446)
...+.+...++.|++++ +..++++.|.||||.+|..+|+..|. +..+-++++... +.+ .+ ..+...+.
T Consensus 156 ~~~i~E~~~Ll~Wl~~~-G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~ 234 (348)
T PF09752_consen 156 RATILESRALLHWLERE-GYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFE 234 (348)
T ss_pred hHHHHHHHHHHHHHHhc-CCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhc
Confidence 11256777889999998 88999999999999999999999998 444444433221 000 00 00101000
Q ss_pred --------hhCCc-------------hhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHH
Q 013268 185 --------IRLPK-------------FTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHS 243 (446)
Q Consensus 185 --------~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~ 243 (446)
...+. ........++...+...... ..+. .+.-.-.+.++.+++|..||.+..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l--~nf~----~P~dp~~ii~V~A~~DaYVPr~~v 308 (348)
T PF09752_consen 235 DTVYEEEISDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHL--TNFP----VPVDPSAIIFVAAKNDAYVPRHGV 308 (348)
T ss_pred ccchhhhhcccccCcccccchhhccccchHHHHHHHHHHHHhhccc--cccC----CCCCCCcEEEEEecCceEechhhc
Confidence 00000 00011111111111111000 0000 011123588999999999999999
Q ss_pred HHHHHHcCCCcEEEEeCCCCCCC---ChhHHHHHHHHHHH
Q 013268 244 DLIFNAYAGDKNIIKFDGDHNSS---RPQFYYDSVSIFFY 280 (446)
Q Consensus 244 ~~l~~~l~~~~~~~~~~ggH~~~---~~~~~~~~i~~Fl~ 280 (446)
..+.+..++ .++.+++|||... +.+.+.+.|.+=|+
T Consensus 309 ~~Lq~~WPG-sEvR~l~gGHVsA~L~~q~~fR~AI~Daf~ 347 (348)
T PF09752_consen 309 LSLQEIWPG-SEVRYLPGGHVSAYLLHQEAFRQAIYDAFE 347 (348)
T ss_pred chHHHhCCC-CeEEEecCCcEEEeeechHHHHHHHHHHhh
Confidence 988888874 6788999999854 66777777776554
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=99.16 E-value=2.5e-10 Score=104.81 Aligned_cols=169 Identities=21% Similarity=0.233 Sum_probs=88.3
Q ss_pred CCcEEEEECCCCCChhhHHHHH----HHhccCCcEEEEeCCCCCC-----CCC----------CCCcCCCcc-------h
Q 013268 65 PLPCVVYCHGNSGCRADANEAA----VILLPSNITLFTLDFSGSG-----LSD----------GDYVSLGWH-------E 118 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~----~~L~~~Gy~Vi~~D~~G~G-----~S~----------~~~~~~~~~-------~ 118 (446)
+++.||++||++++...+.... ..|.+.++..+.+|-|--- ... .....+.|. .
T Consensus 3 ~k~riLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~ 82 (212)
T PF03959_consen 3 RKPRILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHE 82 (212)
T ss_dssp ---EEEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGG
T ss_pred CCceEEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCccc
Confidence 5689999999999998886543 3444437899988876321 110 000011111 1
Q ss_pred HHHHHHHHHHHHhcCCC-C-cEEEEEechhHHHHHHHHHh---------CCCccEEEEeCCccCHHHHHHHHHHHHhhhC
Q 013268 119 KDDLKVVVSYLRGNKQT-S-RIGLWGRSMGAVTSLLYGAE---------DPSIAGMVLDSAFSDLFDLMLELVDVYKIRL 187 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~-~-~i~lvG~S~GG~ial~~a~~---------~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~ 187 (446)
..++.+.++++.+.... . -.+|+|+|.||.+|..++.. .|.++.+|+++++......
T Consensus 83 ~~~~~~sl~~l~~~i~~~GPfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 83 YEGLDESLDYLRDYIEENGPFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp G---HHHHHHHHHHHHHH---SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred ccCHHHHHHHHHHHHHhcCCeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 34455555555443222 2 25899999999999888764 2348999999887532100
Q ss_pred CchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCCC
Q 013268 188 PKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSR 267 (446)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~~ 267 (446)
+ ...-...+|++|+|.|+|.+|.+++++.++.+.+.+.+..+++..+|||..+.
T Consensus 151 ---------------------~-----~~~~~~~~i~iPtlHv~G~~D~~~~~~~s~~L~~~~~~~~~v~~h~gGH~vP~ 204 (212)
T PF03959_consen 151 ---------------------Y-----QELYDEPKISIPTLHVIGENDPVVPPERSEALAEMFDPDARVIEHDGGHHVPR 204 (212)
T ss_dssp ---------------------G-----TTTT--TT---EEEEEEETT-SSS-HHHHHHHHHHHHHHEEEEEESSSSS---
T ss_pred ---------------------h-----hhhhccccCCCCeEEEEeCCCCCcchHHHHHHHHhccCCcEEEEECCCCcCcC
Confidence 0 00012456789999999999999999999999988874477888899999885
Q ss_pred hhHH
Q 013268 268 PQFY 271 (446)
Q Consensus 268 ~~~~ 271 (446)
....
T Consensus 205 ~~~~ 208 (212)
T PF03959_consen 205 KKED 208 (212)
T ss_dssp -HHH
T ss_pred Chhh
Confidence 4443
No 123
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=99.15 E-value=8.4e-09 Score=97.70 Aligned_cols=222 Identities=17% Similarity=0.235 Sum_probs=135.2
Q ss_pred eEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH-------HHHHHHhccCCcEEEEeCCCCCCCCCC
Q 013268 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA-------NEAAVILLPSNITLFTLDFSGSGLSDG 109 (446)
Q Consensus 37 ~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~-------~~~~~~L~~~Gy~Vi~~D~~G~G~S~~ 109 (446)
.+++.+.. |+..|.+....- +...+...||++-|.++..+.. ..+.+.....|.+|+.++|||.|.|.|
T Consensus 112 ~kRv~Iq~-D~~~IDt~~I~~---~~a~~~RWiL~s~GNg~~~E~~~~~~~~~~~~~~~ak~~~aNvl~fNYpGVg~S~G 187 (365)
T PF05677_consen 112 VKRVPIQY-DGVKIDTMAIHQ---PEAKPQRWILVSNGNGECYENRAMLDYKDDWIQRFAKELGANVLVFNYPGVGSSTG 187 (365)
T ss_pred eeeEEEee-CCEEEEEEEeeC---CCCCCCcEEEEEcCChHHhhhhhhhccccHHHHHHHHHcCCcEEEECCCccccCCC
Confidence 35555654 999988766431 1446788999999999876651 123333334588999999999999998
Q ss_pred CCcCCCcchHHHHHHHHHHHHhcCC---CCcEEEEEechhHHHHHHHHHhCCC-----ccE-EEEeCCccCHHHHHHHHH
Q 013268 110 DYVSLGWHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAEDPS-----IAG-MVLDSAFSDLFDLMLELV 180 (446)
Q Consensus 110 ~~~~~~~~~~~D~~~~i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~~p~-----v~~-lVl~sp~~~~~~~~~~~~ 180 (446)
..... .-+.|..+.++||+++.. .++|++.|||+||.++..++.++.- ++- +|-.-++.++......+.
T Consensus 188 ~~s~~--dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~~~~~dgi~~~~ikDRsfssl~~vas~~~ 265 (365)
T PF05677_consen 188 PPSRK--DLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEVLKGSDGIRWFLIKDRSFSSLAAVASQFF 265 (365)
T ss_pred CCCHH--HHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcccccCCCeeEEEEecCCcchHHHHHHHHH
Confidence 87532 237899999999997542 2899999999999999986665431 443 344456666655543332
Q ss_pred HHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCC-------CCCCChHHH--HHHHHH--
Q 013268 181 DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASE-------DKFIRARHS--DLIFNA-- 249 (446)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~-------D~~vp~~~~--~~l~~~-- 249 (446)
.... .++.+ ...+ +.+..+...++.||-+++++.+ |..++++.+ ..+.+.
T Consensus 266 ~~~~------------~~l~~----l~gW---nidS~K~s~~l~cpeIii~~~d~~~~~i~Dgl~~~~~~lA~~~l~~~~ 326 (365)
T PF05677_consen 266 GPIG------------KLLIK----LLGW---NIDSAKNSEKLQCPEIIIYGVDSRSQLIGDGLFEPENCLAAAFLDPPT 326 (365)
T ss_pred HHHH------------HHHHH----Hhcc---CCCchhhhccCCCCeEEEeccccchhhcccccCCcchhhHHHhcCCcc
Confidence 2111 11111 1122 3345566778889999999874 444554432 222221
Q ss_pred ---cCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhhc
Q 013268 250 ---YAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVL 283 (446)
Q Consensus 250 ---l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L 283 (446)
++..+..+.-.. .|..+-.+...+.+..-+.+++
T Consensus 327 ~~~~~~~Ki~i~~~~l~H~~~L~~~~~~~la~~I~~~~ 364 (365)
T PF05677_consen 327 AEKLSGKKIPIGERLLLHNEPLDDETIQALAEHILDHF 364 (365)
T ss_pred cccccccceecccccccccccCChHHHHHHHHHHHhhc
Confidence 111222222223 6776644455555555555443
No 124
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=99.14 E-value=2.7e-10 Score=106.67 Aligned_cols=185 Identities=21% Similarity=0.274 Sum_probs=126.4
Q ss_pred eEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCc
Q 013268 37 RQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW 116 (446)
Q Consensus 37 ~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~ 116 (446)
-+...+++.||..|......-.+...++....||.+-|..|--+. .....=++.||.|+.+++||++.|.|.+...
T Consensus 214 G~R~kiks~dgneiDtmF~d~r~n~~~ngq~LvIC~EGNAGFYEv--G~m~tP~~lgYsvLGwNhPGFagSTG~P~p~-- 289 (517)
T KOG1553|consen 214 GQRLKIKSSDGNEIDTMFLDGRPNQSGNGQDLVICFEGNAGFYEV--GVMNTPAQLGYSVLGWNHPGFAGSTGLPYPV-- 289 (517)
T ss_pred CeEEEEeecCCcchhheeecCCCCCCCCCceEEEEecCCccceEe--eeecChHHhCceeeccCCCCccccCCCCCcc--
Confidence 356778888998888654432212233456788888888764221 1122233569999999999999999887655
Q ss_pred chHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHH
Q 013268 117 HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKM 194 (446)
Q Consensus 117 ~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (446)
.+...+.+++++..+.++. +.|+++|+|.||+.+..+|..+|+|+++|+.+.+.++..+... +.|.+.
T Consensus 290 n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPdVkavvLDAtFDDllpLAl~-------rMP~~~--- 359 (517)
T KOG1553|consen 290 NTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPDVKAVVLDATFDDLLPLALF-------RMPTFF--- 359 (517)
T ss_pred cchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCCceEEEeecchhhhhhHHhh-------hchHHH---
Confidence 3366777788888887665 8899999999999999999999999999999998876443211 122211
Q ss_pred HHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChH
Q 013268 195 AVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRAR 241 (446)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~ 241 (446)
.......+. .....+..+.+.+.+-|+.+|.-.+|.++...
T Consensus 360 -~giV~~aiR-----nh~NLnnaell~ry~GPi~lIRRt~dEIitt~ 400 (517)
T KOG1553|consen 360 -SGIVEHAIR-----NHMNLNNAELLARYKGPIRLIRRTQDEIITTA 400 (517)
T ss_pred -HHHHHHHHH-----HhcccchHHHHHhhcCchhHhhhhhHhhhhcc
Confidence 111122111 12233445667778899999999999876543
No 125
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.12 E-value=8.7e-10 Score=116.96 Aligned_cols=92 Identities=23% Similarity=0.280 Sum_probs=72.6
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCC----------CcCC-------------Cc-chHH
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGD----------YVSL-------------GW-HEKD 120 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~----------~~~~-------------~~-~~~~ 120 (446)
..|+||++||++++...|..++..|+++||+|+++|+||||.|... .... .+ +.+.
T Consensus 448 g~P~VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~ 527 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSIL 527 (792)
T ss_pred CCcEEEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHH
Confidence 4689999999999999999999999989999999999999999432 1111 11 1256
Q ss_pred HHHHHHHHHH------hc------CCCCcEEEEEechhHHHHHHHHHh
Q 013268 121 DLKVVVSYLR------GN------KQTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 121 D~~~~i~~l~------~~------~~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
|+..+...+. .. .+..+++++||||||.++..++..
T Consensus 528 Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 528 DLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred HHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 7777777776 22 234799999999999999999875
No 126
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=99.10 E-value=1e-09 Score=110.22 Aligned_cols=235 Identities=14% Similarity=0.185 Sum_probs=157.0
Q ss_pred CCCceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCC--hhhHHHHHHHhccCCcEEEEeCCCCCCCCC
Q 013268 31 AGRSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSD 108 (446)
Q Consensus 31 ~~~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~--~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~ 108 (446)
..-+++.+....++.||++|.+.+.. ++...+ +.|++|+--|+..- ...|......+.++|...+..+.||-|+-.
T Consensus 388 Da~~~~veQ~~atSkDGT~IPYFiv~-K~~~~d-~~pTll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfG 465 (648)
T COG1505 388 DADNYEVEQFFATSKDGTRIPYFIVR-KGAKKD-ENPTLLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFG 465 (648)
T ss_pred CccCceEEEEEEEcCCCccccEEEEe-cCCcCC-CCceEEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccC
Confidence 34467788999999999999998886 544344 78888887777642 223445557788899999999999988776
Q ss_pred CCCcCCCc-----chHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHH----
Q 013268 109 GDYVSLGW-----HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM---- 176 (446)
Q Consensus 109 ~~~~~~~~-----~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~---- 176 (446)
......+. ...+|+.++.+.|.++.-. +++++.|-|-||.+.-.+..++|+ +.++|+-.|..++...-
T Consensus 466 p~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evPllDMlRYh~l~a 545 (648)
T COG1505 466 PEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVPLLDMLRYHLLTA 545 (648)
T ss_pred HHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccchhhhhhhccccc
Confidence 43222211 2378999999999888332 789999999999999999999999 88888777766543211
Q ss_pred -HHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC--CCCcEEEEEeCCCCCCChHHHHHHHHHcCC-
Q 013268 177 -LELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASEDKFIRARHSDLIFNAYAG- 252 (446)
Q Consensus 177 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D~~vp~~~~~~l~~~l~~- 252 (446)
..++..++ .|..+... . .+..+++..+++. .-.|+||-.+..|.-|+|.++++++.++..
T Consensus 546 G~sW~~EYG--~Pd~P~d~--~------------~l~~YSPy~nl~~g~kYP~~LITTs~~DDRVHPaHarKfaa~L~e~ 609 (648)
T COG1505 546 GSSWIAEYG--NPDDPEDR--A------------FLLAYSPYHNLKPGQKYPPTLITTSLHDDRVHPAHARKFAAKLQEV 609 (648)
T ss_pred chhhHhhcC--CCCCHHHH--H------------HHHhcCchhcCCccccCCCeEEEcccccccccchHHHHHHHHHHhc
Confidence 11222221 11111110 0 1112344444433 235899999999999999999999988762
Q ss_pred -CcEEEEe--CCCCCCCCh----hHHHHHHHHHHHhhc
Q 013268 253 -DKNIIKF--DGDHNSSRP----QFYYDSVSIFFYNVL 283 (446)
Q Consensus 253 -~~~~~~~--~ggH~~~~~----~~~~~~i~~Fl~~~L 283 (446)
...++.. +|||..-.+ ......+..||.+.|
T Consensus 610 ~~pv~~~e~t~gGH~g~~~~~~~A~~~a~~~afl~r~L 647 (648)
T COG1505 610 GAPVLLREETKGGHGGAAPTAEIARELADLLAFLLRTL 647 (648)
T ss_pred CCceEEEeecCCcccCCCChHHHHHHHHHHHHHHHHhh
Confidence 2233333 359986622 233345567887766
No 127
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=99.09 E-value=6.3e-10 Score=97.65 Aligned_cols=179 Identities=16% Similarity=0.072 Sum_probs=124.3
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechh
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~G 146 (446)
..+||+-|-||....-..++..|+++|+.|+.+|-+-+=.+.+.+. +...|+..++++..++.+..+++|+|+|+|
T Consensus 3 t~~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~----~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFG 78 (192)
T PF06057_consen 3 TLAVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPE----QTAADLARIIRHYRARWGRKRVVLIGYSFG 78 (192)
T ss_pred EEEEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHH----HHHHHHHHHHHHHHHHhCCceEEEEeecCC
Confidence 4688999999888767788999999999999999886656554442 237899999999999988899999999999
Q ss_pred HHHHHHHHHhCCC-----ccEEEEeCCccCHH--HHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhh
Q 013268 147 AVTSLLYGAEDPS-----IAGMVLDSAFSDLF--DLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKL 219 (446)
Q Consensus 147 G~ial~~a~~~p~-----v~~lVl~sp~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (446)
+-+.-.+..+-|. |+.+++++|..... -.+..++... -.....+....
T Consensus 79 ADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~dFeihv~~wlg~~-------------------------~~~~~~~~~pe 133 (192)
T PF06057_consen 79 ADVLPFIYNRLPAALRARVAQVVLLSPSTTADFEIHVSGWLGMG-------------------------GDDAAYPVIPE 133 (192)
T ss_pred chhHHHHHhhCCHHHHhheeEEEEeccCCcceEEEEhhhhcCCC-------------------------CCcccCCchHH
Confidence 9888877777663 89999988865421 0000010000 00000133344
Q ss_pred CCCCC-CcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC-ChhHHHHHHHHHHH
Q 013268 220 APKTF-IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-RPQFYYDSVSIFFY 280 (446)
Q Consensus 220 l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~-~~~~~~~~i~~Fl~ 280 (446)
+.++. .|++.|+|.+|.-..-. ..-.+..+++..+|||.+. +.+.+.+.|++-++
T Consensus 134 i~~l~~~~v~CiyG~~E~d~~cp------~l~~~~~~~i~lpGgHHfd~dy~~La~~Il~~l~ 190 (192)
T PF06057_consen 134 IAKLPPAPVQCIYGEDEDDSLCP------SLRQPGVEVIALPGGHHFDGDYDALAKRILDALK 190 (192)
T ss_pred HHhCCCCeEEEEEcCCCCCCcCc------cccCCCcEEEEcCCCcCCCCCHHHHHHHHHHHHh
Confidence 55554 49999999988752211 1112467789999998877 66677777766554
No 128
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.04 E-value=2.2e-09 Score=99.50 Aligned_cols=124 Identities=21% Similarity=0.194 Sum_probs=94.1
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHH--HHhcc-CCcEEEEeCCCC-------CCCCCCCC-cC
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA--VILLP-SNITLFTLDFSG-------SGLSDGDY-VS 113 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~--~~L~~-~Gy~Vi~~D~~G-------~G~S~~~~-~~ 113 (446)
.+|.+..+++|.|...+. +.|+||++||.+++...+.... +.+++ .||.|+.+|--. .+.+.++. ..
T Consensus 42 ~~g~~r~y~l~vP~g~~~--~apLvv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~ 119 (312)
T COG3509 42 VNGLKRSYRLYVPPGLPS--GAPLVVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRR 119 (312)
T ss_pred cCCCccceEEEcCCCCCC--CCCEEEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCccccc
Confidence 678899999999987543 4499999999999887766553 55555 499999995332 22332221 13
Q ss_pred CCcchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCcc
Q 013268 114 LGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (446)
Q Consensus 114 ~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~ 170 (446)
.+..++..+.++++.+..++.+ .+|++.|.|-||.++..++..+|+ +.++.++++..
T Consensus 120 ~g~ddVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 120 RGVDDVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred CCccHHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3445688899999999999887 599999999999999999999999 67776665543
No 129
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.01 E-value=7.1e-08 Score=91.62 Aligned_cols=105 Identities=18% Similarity=0.196 Sum_probs=78.1
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccC---CcEEEEeCCCCCCCCCCCC------cCCCcc-hHHHHHHHHHHHHhcC--
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSDGDY------VSLGWH-EKDDLKVVVSYLRGNK-- 133 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~---Gy~Vi~~D~~G~G~S~~~~------~~~~~~-~~~D~~~~i~~l~~~~-- 133 (446)
++.||+++|.+|-.+.|..+...|.++ .|.|+++.+.||-.++... ..++.. .++-..+.++.+....
T Consensus 2 ~~li~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~ 81 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNK 81 (266)
T ss_pred cEEEEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcC
Confidence 578999999999999999988877644 7999999999997776541 112221 1333444444444433
Q ss_pred CCCcEEEEEechhHHHHHHHHHhCC----CccEEEEeCCcc
Q 013268 134 QTSRIGLWGRSMGAVTSLLYGAEDP----SIAGMVLDSAFS 170 (446)
Q Consensus 134 ~~~~i~lvG~S~GG~ial~~a~~~p----~v~~lVl~sp~~ 170 (446)
...+++|+|||.|++++++++.+.+ +|.+++++.|..
T Consensus 82 ~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 82 PNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred CCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 3478999999999999999999998 388888877643
No 130
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.99 E-value=6.1e-08 Score=93.20 Aligned_cols=200 Identities=16% Similarity=0.205 Sum_probs=115.4
Q ss_pred HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCC------CCcEEEEEechhHHHHHHHHHhC
Q 013268 84 EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 84 ~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~------~~~i~lvG~S~GG~ial~~a~~~ 157 (446)
.++..++++||.|+++||.|.|. +...+..+...+.+.++..++... ..+++++|||.||..++.++...
T Consensus 17 ~~l~~~L~~GyaVv~pDY~Glg~----~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~ 92 (290)
T PF03583_consen 17 PFLAAWLARGYAVVAPDYEGLGT----PYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELA 92 (290)
T ss_pred HHHHHHHHCCCEEEecCCCCCCC----cccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHh
Confidence 34567778899999999999987 222233334555555555554322 26899999999999998776543
Q ss_pred ----CC----ccEEEEeCCccCHHHHHHH------------HHHHHhhhCCchh--HHH-----HHHHHHHH--------
Q 013268 158 ----PS----IAGMVLDSAFSDLFDLMLE------------LVDVYKIRLPKFT--VKM-----AVQYMRRV-------- 202 (446)
Q Consensus 158 ----p~----v~~lVl~sp~~~~~~~~~~------------~~~~~~~~~~~~~--~~~-----~~~~~~~~-------- 202 (446)
|+ +.+.++.+++.++...+.. .+..+....|.+. ... ....+...
T Consensus 93 ~~YApeL~~~l~Gaa~gg~~~dl~~~~~~~~~~~~~g~~~~~l~gl~~~yP~l~~~~~~~l~~~g~~~~~~~~~~c~~~~ 172 (290)
T PF03583_consen 93 PSYAPELNRDLVGAAAGGPPADLAALLRALNGGPFAGLVPYALLGLAAAYPELDELLDSYLTPEGRALLDDARTRCLADI 172 (290)
T ss_pred HHhCcccccceeEEeccCCccCHHHHHhccCCCccHhHHHHHHHHHHHhCccHHHHHHHHhhHHHHHHHHHHHhhhHHHH
Confidence 33 5677777777776544331 1111112223222 100 00000000
Q ss_pred Hhhhhcccc---------cccc------h-----hhhC-----CCCCCcEEEEEeCCCCCCChHHHHHHHHHcC----CC
Q 013268 203 IQKKAKFDI---------MDLN------C-----LKLA-----PKTFIPALFGHASEDKFIRARHSDLIFNAYA----GD 253 (446)
Q Consensus 203 ~~~~~~~~~---------~~~~------~-----~~~l-----~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~----~~ 253 (446)
......... ...+ . ...+ ...+.|++|.+|..|.++|+.....+.+.+. .+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~ 252 (290)
T PF03583_consen 173 VAEYAFQDLFTGDTRYFKPGADLLADPAFRRALAENSLGMGGDWTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGGAD 252 (290)
T ss_pred HHHhhhccccccchhccCChhhhhhhHHHHHHHHHhhccccCCCCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCC
Confidence 000000000 0000 0 0111 2336899999999999999999998887753 25
Q ss_pred cEEEEeCC-CCCCCChhHHHHHHHHHHHhhcCCCCC
Q 013268 254 KNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQI 288 (446)
Q Consensus 254 ~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L~~~~~ 288 (446)
++++.+++ +|..... .-....+.||..+|.+.+.
T Consensus 253 V~~~~~~~~~H~~~~~-~~~~~a~~Wl~~rf~G~~~ 287 (290)
T PF03583_consen 253 VEYVRYPGGGHLGAAF-ASAPDALAWLDDRFAGKPA 287 (290)
T ss_pred EEEEecCCCChhhhhh-cCcHHHHHHHHHHHCCCCC
Confidence 66777776 8986522 1235566999999987554
No 131
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.96 E-value=6.6e-08 Score=97.27 Aligned_cols=197 Identities=11% Similarity=0.073 Sum_probs=113.9
Q ss_pred EEEEEC-CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCCh-hhHHHHHHHhccCC----cEEEEeCCCCCCCCCCCCc
Q 013268 39 DLEIRN-ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPSN----ITLFTLDFSGSGLSDGDYV 112 (446)
Q Consensus 39 ~v~~~~-~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~-~~~~~~~~~L~~~G----y~Vi~~D~~G~G~S~~~~~ 112 (446)
.+.+.+ .-|....+++|.|.+.. .++.|+|+++||..... ......+..|...| ..++.+|..+...-.....
T Consensus 182 ~~~~~S~~Lg~~r~v~VY~P~~y~-~~~~PvlyllDG~~w~~~~~~~~~ld~li~~g~i~P~ivV~id~~~~~~R~~el~ 260 (411)
T PRK10439 182 EIIWKSERLGNSRRVWIYTTGDAA-PEERPLAILLDGQFWAESMPVWPALDSLTHRGQLPPAVYLLIDAIDTTHRSQELP 260 (411)
T ss_pred EEEEEccccCCceEEEEEECCCCC-CCCCCEEEEEECHHhhhcCCHHHHHHHHHHcCCCCceEEEEECCCCcccccccCC
Confidence 344443 34677888899997643 46789999999975221 11233445555555 3467887632111111111
Q ss_pred CCCcchHHH-HHHHHHHHHhcCCC----CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhh
Q 013268 113 SLGWHEKDD-LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIR 186 (446)
Q Consensus 113 ~~~~~~~~D-~~~~i~~l~~~~~~----~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~ 186 (446)
......+. +.+++-++.+++.. ++.+|.|+||||..|+.++..+|+ +.+++..+|..-... .
T Consensus 261 -~~~~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ww~~-----------~ 328 (411)
T PRK10439 261 -CNADFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSFWWPH-----------R 328 (411)
T ss_pred -chHHHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccceecCC-----------c
Confidence 11011122 34566777776543 678999999999999999999999 899999887531000 0
Q ss_pred CCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCCCC
Q 013268 187 LPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDGDH 263 (446)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~ggH 263 (446)
... .... +..... . .....-...+++-+|..|..+ .+..+.+.+.+. -...+.+++|||
T Consensus 329 ~~~-~~~~---l~~~l~-~------------~~~~~~~lr~~i~~G~~E~~~-~~~~~~l~~~L~~~G~~~~~~~~~GGH 390 (411)
T PRK10439 329 GGQ-QEGV---LLEQLK-A------------GEVSARGLRIVLEAGRREPMI-MRANQALYAQLHPAGHSVFWRQVDGGH 390 (411)
T ss_pred cCC-chhH---HHHHHH-h------------cccCCCCceEEEeCCCCCchH-HHHHHHHHHHHHHCCCcEEEEECCCCc
Confidence 000 0000 111000 0 001112245888899988654 455666766654 356788889999
Q ss_pred CCC
Q 013268 264 NSS 266 (446)
Q Consensus 264 ~~~ 266 (446)
...
T Consensus 391 d~~ 393 (411)
T PRK10439 391 DAL 393 (411)
T ss_pred CHH
Confidence 865
No 132
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.95 E-value=1.1e-08 Score=99.21 Aligned_cols=198 Identities=13% Similarity=0.054 Sum_probs=127.2
Q ss_pred CCcEEEEECCCCCChhhH-----HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcch--HHHHHHHHHHHHhcCCCCc
Q 013268 65 PLPCVVYCHGNSGCRADA-----NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHE--KDDLKVVVSYLRGNKQTSR 137 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~-----~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~--~~D~~~~i~~l~~~~~~~~ 137 (446)
-.++++++|.+-.....+ ..++.++.++|+.|+.+++++-..+.+. .++.+ .+++..+++.+++..+.++
T Consensus 106 ~~~PlLiVpP~iNk~yi~Dl~~~~s~V~~l~~~g~~vfvIsw~nPd~~~~~---~~~edYi~e~l~~aid~v~~itg~~~ 182 (445)
T COG3243 106 LKRPLLIVPPWINKFYILDLSPEKSLVRWLLEQGLDVFVISWRNPDASLAA---KNLEDYILEGLSEAIDTVKDITGQKD 182 (445)
T ss_pred CCCceEeeccccCceeEEeCCCCccHHHHHHHcCCceEEEeccCchHhhhh---ccHHHHHHHHHHHHHHHHHHHhCccc
Confidence 467788899886432222 4578899999999999999976666542 22222 4778889999999888899
Q ss_pred EEEEEechhHHHHHHHHHhCCC--ccEEEEeCCccCHHH-----------HHHHHHHHH--hhhCCchhH----------
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFD-----------LMLELVDVY--KIRLPKFTV---------- 192 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~--v~~lVl~sp~~~~~~-----------~~~~~~~~~--~~~~~~~~~---------- 192 (446)
|.++|+|.||.++..+++..+. |+.++++....++.. .+....... ...+|....
T Consensus 183 InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~DF~~~g~l~if~n~~~~~~~~~~i~~~g~lpg~~ma~~F~mLrpn 262 (445)
T COG3243 183 INLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPVDFSHAGDLGIFANEATIEALDADIVQKGILPGWYMAIVFFLLRPN 262 (445)
T ss_pred cceeeEecchHHHHHHHHhhhhcccccceeeecchhhccccccccccCHHHHHHHHhhhhhccCCChHHHHHHHHhcCcc
Confidence 9999999999999988888774 777777654443221 011000000 001111111
Q ss_pred ----------------------------------HHHHHHHHHHHhhhhccc--ccccchhhhCCCCCCcEEEEEeCCCC
Q 013268 193 ----------------------------------KMAVQYMRRVIQKKAKFD--IMDLNCLKLAPKTFIPALFGHASEDK 236 (446)
Q Consensus 193 ----------------------------------~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~i~~PvLii~G~~D~ 236 (446)
.....+++.++....... ..-....-.+.+|+||++++.|+.|.
T Consensus 263 dliw~~fV~nyl~ge~pl~fdllyWn~dst~~~~~~~~~~Lrn~y~~N~l~~g~~~v~G~~VdL~~It~pvy~~a~~~Dh 342 (445)
T COG3243 263 DLIWNYFVNNYLDGEQPLPFDLLYWNADSTRLPGAAHSEYLRNFYLENRLIRGGLEVSGTMVDLGDITCPVYNLAAEEDH 342 (445)
T ss_pred ccchHHHHHHhcCCCCCCchhHHHhhCCCccCchHHHHHHHHHHHHhChhhccceEECCEEechhhcccceEEEeecccc
Confidence 011111111111100000 00001223467799999999999999
Q ss_pred CCChHHHHHHHHHcCCCcEEEEeCCCCCC
Q 013268 237 FIRARHSDLIFNAYAGDKNIIKFDGDHNS 265 (446)
Q Consensus 237 ~vp~~~~~~l~~~l~~~~~~~~~~ggH~~ 265 (446)
++|.+......+.+++.++++..++||..
T Consensus 343 I~P~~Sv~~g~~l~~g~~~f~l~~sGHIa 371 (445)
T COG3243 343 IAPWSSVYLGARLLGGEVTFVLSRSGHIA 371 (445)
T ss_pred cCCHHHHHHHHHhcCCceEEEEecCceEE
Confidence 99999999999999988889999999983
No 133
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=98.93 E-value=5.3e-09 Score=91.48 Aligned_cols=188 Identities=13% Similarity=0.051 Sum_probs=127.6
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEECCCCC---ChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHH
Q 013268 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVV 125 (446)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VVllHG~g~---~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~ 125 (446)
.-...+|.|. ...|+.||+||+.. ++..-...+..+.++||+|..++|- .+....... ..+.++...
T Consensus 55 ~q~VDIwg~~-----~~~klfIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY~---l~~q~htL~--qt~~~~~~g 124 (270)
T KOG4627|consen 55 RQLVDIWGST-----NQAKLFIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGYN---LCPQVHTLE--QTMTQFTHG 124 (270)
T ss_pred ceEEEEecCC-----CCccEEEEEecchhhcCchhcccchhhhhhhcCeEEEEeccC---cCcccccHH--HHHHHHHHH
Confidence 4455677653 57799999999963 3334445566778889999998763 444321111 226788888
Q ss_pred HHHHHhcCCC-CcEEEEEechhHHHHHHHHHh--CCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHH
Q 013268 126 VSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE--DPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRV 202 (446)
Q Consensus 126 i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~--~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (446)
++|+.+.... +.+.+-|||.|+.+|+.+..+ .|.|.|+++.++...+.++...-.. ..-... .+
T Consensus 125 v~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~l~EL~~te~g----~dlgLt--------~~- 191 (270)
T KOG4627|consen 125 VNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYDLRELSNTESG----NDLGLT--------ER- 191 (270)
T ss_pred HHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhhHHHHhCCccc----cccCcc--------cc-
Confidence 8999888766 678888999999999998876 4559999999998877664321100 000000 00
Q ss_pred HhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 013268 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (446)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~ 266 (446)
... ....-...+..++.|+|++.|..|.---.++.+.+...+.. ..+..+++ +|+..
T Consensus 192 ---~ae---~~Scdl~~~~~v~~~ilVv~~~~espklieQnrdf~~q~~~-a~~~~f~n~~hy~I 249 (270)
T KOG4627|consen 192 ---NAE---SVSCDLWEYTDVTVWILVVAAEHESPKLIEQNRDFADQLRK-ASFTLFKNYDHYDI 249 (270)
T ss_pred ---hhh---hcCccHHHhcCceeeeeEeeecccCcHHHHhhhhHHHHhhh-cceeecCCcchhhH
Confidence 000 00011244567889999999999987778888898888775 56888898 99855
No 134
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.93 E-value=4.1e-09 Score=99.30 Aligned_cols=126 Identities=19% Similarity=0.280 Sum_probs=81.8
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhH--HHHHHHhccCC----cEEEEeCCCCCCCCCCC----------
Q 013268 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADA--NEAAVILLPSN----ITLFTLDFSGSGLSDGD---------- 110 (446)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~--~~~~~~L~~~G----y~Vi~~D~~G~G~S~~~---------- 110 (446)
|......+|+|.+....++.|+|+++||.......+ ...+..+...| ..+++++..+.+.....
T Consensus 5 g~~~~~~VylP~~y~~~~~~PvlylldG~~~~~~~~~~~~~~~~~~~~~~~~~~iiV~i~~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PF00756_consen 5 GRDRRVWVYLPPGYDPSKPYPVLYLLDGQSGWFRNGNAQEALDRLIAEGKIPPMIIVVIPNGDNSRFYTSWYLPAGSSRR 84 (251)
T ss_dssp TEEEEEEEEECTTGGTTTTEEEEEEESHTTHHHHHHHHHHHHHHHHHHHTSEEEEEEEEESSSTSSTTSBTTSSBCTTCB
T ss_pred CCeEEEEEEECCCCCCCCCCEEEEEccCCccccccchHHHHHHHHHHhCCCCceEEEEEecccccccccccccccccccc
Confidence 566777899998765667899999999972222111 22233333332 45666666555411110
Q ss_pred CcCCCcc-hHHH--HHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH
Q 013268 111 YVSLGWH-EKDD--LKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (446)
Q Consensus 111 ~~~~~~~-~~~D--~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~ 172 (446)
....+.. ...+ ..+++.++.+++.. .+.+|+|+||||..|+.++.++|+ +.++++++|....
T Consensus 85 ~~~~~~~~~~~~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 85 ADDSGGGDAYETFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp CTSTTTHHHHHHHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred cccCCCCcccceehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 0011111 1122 34678888888776 338999999999999999999999 9999999988544
No 135
>PRK04940 hypothetical protein; Provisional
Probab=98.93 E-value=8.7e-08 Score=84.05 Aligned_cols=117 Identities=15% Similarity=0.045 Sum_probs=78.9
Q ss_pred CcEEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccc
Q 013268 136 SRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLN 215 (446)
Q Consensus 136 ~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (446)
+++.|+|.|+||+.|..++.++. + ..|+++|.......+...... +..........+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-~-~aVLiNPAv~P~~~L~~~ig~-----~~~y~~~~~~h~~--------------- 117 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-I-RQVIFNPNLFPEENMEGKIDR-----PEEYADIATKCVT--------------- 117 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-C-CEEEECCCCChHHHHHHHhCC-----CcchhhhhHHHHH---------------
Confidence 57999999999999999999987 4 556678888776655444321 1110011111111
Q ss_pred hhhhCC-CCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHH
Q 013268 216 CLKLAP-KTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (446)
Q Consensus 216 ~~~~l~-~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~ 280 (446)
.++ +-.-..+++..+.|.+.+.+.+.+.+... ..+.+.+| +|-+..-+.+...|.+|+.
T Consensus 118 ---eL~~~~p~r~~vllq~gDEvLDyr~a~~~y~~~---y~~~v~~GGdH~f~~fe~~l~~I~~F~~ 178 (180)
T PRK04940 118 ---NFREKNRDRCLVILSRNDEVLDSQRTAEELHPY---YEIVWDEEQTHKFKNISPHLQRIKAFKT 178 (180)
T ss_pred ---HhhhcCcccEEEEEeCCCcccCHHHHHHHhccC---ceEEEECCCCCCCCCHHHHHHHHHHHHh
Confidence 111 11224699999999999999887776542 14666676 7888888899999999984
No 136
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=98.92 E-value=2.9e-07 Score=86.24 Aligned_cols=232 Identities=11% Similarity=0.113 Sum_probs=126.6
Q ss_pred EECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-HHHH-----HHHhccCCcEEEEeCCCCCCCCCCC-CcCC
Q 013268 42 IRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEA-----AVILLPSNITLFTLDFSGSGLSDGD-YVSL 114 (446)
Q Consensus 42 ~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-~~~~-----~~~L~~~Gy~Vi~~D~~G~G~S~~~-~~~~ 114 (446)
+++.-| .+.+.++.. ..+++|+||-.|-.|-+... |..+ .+.+.+ .|.++-+|.||+...... +..+
T Consensus 4 v~t~~G-~v~V~v~G~----~~~~kp~ilT~HDvGlNh~scF~~ff~~~~m~~i~~-~f~i~Hi~aPGqe~ga~~~p~~y 77 (283)
T PF03096_consen 4 VETPYG-SVHVTVQGD----PKGNKPAILTYHDVGLNHKSCFQGFFNFEDMQEILQ-NFCIYHIDAPGQEEGAATLPEGY 77 (283)
T ss_dssp EEETTE-EEEEEEESS------TTS-EEEEE--TT--HHHHCHHHHCSHHHHHHHT-TSEEEEEE-TTTSTT-----TT-
T ss_pred eccCce-EEEEEEEec----CCCCCceEEEeccccccchHHHHHHhcchhHHHHhh-ceEEEEEeCCCCCCCcccccccc
Confidence 444555 566656532 12369999999999987665 5544 344444 699999999999765432 2222
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHh------hhC
Q 013268 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYK------IRL 187 (446)
Q Consensus 115 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~------~~~ 187 (446)
.+-..+++.+.+..+.++++++.++-+|--.||++-.++|..+|+ |.|+|++++.......+.-...... ..+
T Consensus 78 ~yPsmd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~~~~L~~~gm 157 (283)
T PF03096_consen 78 QYPSMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLSSWLLYSYGM 157 (283)
T ss_dssp ----HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH-------CT
T ss_pred cccCHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHhccccccccc
Confidence 334477777777777777799999999999999999999999999 9999999886543322221111111 011
Q ss_pred CchhHHH----------------HHHHHHHHHhhhhc------c---cccccchhhhCCCCCCcEEEEEeCCCCCCChHH
Q 013268 188 PKFTVKM----------------AVQYMRRVIQKKAK------F---DIMDLNCLKLAPKTFIPALFGHASEDKFIRARH 242 (446)
Q Consensus 188 ~~~~~~~----------------~~~~~~~~~~~~~~------~---~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~ 242 (446)
....... ..+..+..+..... | ...+.+.....+...||+|++.|+..+. .+.
T Consensus 158 t~~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~--~~~ 235 (283)
T PF03096_consen 158 TSSVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPH--VDD 235 (283)
T ss_dssp TS-HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTT--HHH
T ss_pred ccchHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcc--hhh
Confidence 1111111 11111111111000 0 0112233444566779999999999987 567
Q ss_pred HHHHHHHcCC-CcEEEEeCC-CCCCC--ChhHHHHHHHHHHHh
Q 013268 243 SDLIFNAYAG-DKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (446)
Q Consensus 243 ~~~l~~~l~~-~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~ 281 (446)
+.++..++.+ ..+++.+++ |=... .|..+.+.+.-|+.-
T Consensus 236 vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFlQG 278 (283)
T PF03096_consen 236 VVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFLQG 278 (283)
T ss_dssp HHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHHHH
T ss_pred HHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHHcc
Confidence 7888888864 456677765 55544 788888888888764
No 137
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.88 E-value=2.7e-08 Score=93.16 Aligned_cols=199 Identities=17% Similarity=0.154 Sum_probs=116.7
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhc-cCCcE----EEEeCCCCC----CCCCC---CCc-----CCCc-----chHHH
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILL-PSNIT----LFTLDFSGS----GLSDG---DYV-----SLGW-----HEKDD 121 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~-~~Gy~----Vi~~D~~G~----G~S~~---~~~-----~~~~-----~~~~D 121 (446)
....+.||+||++++...+..++..+. ++|.. ++.++--|. |.-.. .+. .... ....-
T Consensus 9 ~~~tPTifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~w 88 (255)
T PF06028_consen 9 QSTTPTIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKW 88 (255)
T ss_dssp -S-EEEEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHH
T ss_pred cCCCcEEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHH
Confidence 345688999999999999999999886 55532 344444443 21111 000 0011 13667
Q ss_pred HHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC------CCccEEEEeCCccCHHHHHHH---HHHHHhhhCCchhH
Q 013268 122 LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLMLE---LVDVYKIRLPKFTV 192 (446)
Q Consensus 122 ~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~------p~v~~lVl~sp~~~~~~~~~~---~~~~~~~~~~~~~~ 192 (446)
+..++.+|++++++.++-+|||||||..++.++..+ |.+..+|.++++.+....... ........ |...
T Consensus 89 l~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~~~~~~~~~~~~~~~~g-p~~~- 166 (255)
T PF06028_consen 89 LKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGILGMNDDQNQNDLNKNG-PKSM- 166 (255)
T ss_dssp HHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTTTCCSC-TTTT-CSTT--BSS--
T ss_pred HHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCccccccccchhhhhcccC-Cccc-
Confidence 889999999999999999999999999999998874 447888888776653211000 00000000 1111
Q ss_pred HHHHHHHHHHHhh-hhcccccccchhhhCCCCCCcEEEEEeC------CCCCCChHHHHHHHHHcCC---CcEEEEeCC-
Q 013268 193 KMAVQYMRRVIQK-KAKFDIMDLNCLKLAPKTFIPALFGHAS------EDKFIRARHSDLIFNAYAG---DKNIIKFDG- 261 (446)
Q Consensus 193 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~i~~PvLii~G~------~D~~vp~~~~~~l~~~l~~---~~~~~~~~g- 261 (446)
......+... +.. + .-.+.+|-|.|. .|-.||...+..+...+.+ ..+-.++.|
T Consensus 167 ---~~~y~~l~~~~~~~-----------~-p~~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~~~Y~e~~v~G~ 231 (255)
T PF06028_consen 167 ---TPMYQDLLKNRRKN-----------F-PKNIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRAKSYQEKTVTGK 231 (255)
T ss_dssp ----HHHHHHHHTHGGG-----------S-TTT-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTSSEEEEEEEESG
T ss_pred ---CHHHHHHHHHHHhh-----------C-CCCeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhcccCceEEEEEECC
Confidence 1222222211 111 1 123579999998 8999999999999888864 223344544
Q ss_pred --CCCCC-ChhHHHHHHHHHH
Q 013268 262 --DHNSS-RPQFYYDSVSIFF 279 (446)
Q Consensus 262 --gH~~~-~~~~~~~~i~~Fl 279 (446)
.|... +...+.+.|.+||
T Consensus 232 ~a~HS~LheN~~V~~~I~~FL 252 (255)
T PF06028_consen 232 DAQHSQLHENPQVDKLIIQFL 252 (255)
T ss_dssp GGSCCGGGCCHHHHHHHHHHH
T ss_pred CCccccCCCCHHHHHHHHHHh
Confidence 58755 6668888888887
No 138
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=98.88 E-value=3.3e-08 Score=100.75 Aligned_cols=218 Identities=17% Similarity=0.186 Sum_probs=147.3
Q ss_pred CceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCCCC
Q 013268 33 RSYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGD 110 (446)
Q Consensus 33 ~~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~ 110 (446)
..|..+.+..+..||..+...++.-++..-.++.|++|+.-|.-|... .|....-.|.++|+.-...-.||-|.-...
T Consensus 415 ~~Y~s~riwa~a~dgv~VPVSLvyrkd~~~~g~~p~lLygYGaYG~s~~p~Fs~~~lSLlDRGfiyAIAHVRGGgelG~~ 494 (682)
T COG1770 415 EDYVSRRIWATADDGVQVPVSLVYRKDTKLDGSAPLLLYGYGAYGISMDPSFSIARLSLLDRGFVYAIAHVRGGGELGRA 494 (682)
T ss_pred hHeEEEEEEEEcCCCcEeeEEEEEecccCCCCCCcEEEEEeccccccCCcCcccceeeeecCceEEEEEEeecccccChH
Confidence 457888999999999999998887665445678899999888866432 344455678899998888888998876643
Q ss_pred CcCCC-----cchHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHH--
Q 013268 111 YVSLG-----WHEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELV-- 180 (446)
Q Consensus 111 ~~~~~-----~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~-- 180 (446)
....+ .....|+.++.++|.+..-. ++|+++|-|.||++...++.+.|+ ++++|+..|+.++...+..-.
T Consensus 495 WYe~GK~l~K~NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVDvltTMlD~slP 574 (682)
T COG1770 495 WYEDGKLLNKKNTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVDVLTTMLDPSLP 574 (682)
T ss_pred HHHhhhhhhccccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccchhhhhcCCCCC
Confidence 32221 23478999999999887433 689999999999999999999999 999999999998765432110
Q ss_pred ------HHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC-CCCcEEEEEeCCCCCCChHHHHHHHHHcC--
Q 013268 181 ------DVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TFIPALFGHASEDKFIRARHSDLIFNAYA-- 251 (446)
Q Consensus 181 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~~PvLii~G~~D~~vp~~~~~~l~~~l~-- 251 (446)
..|+ -|. .+...+++. .+++..++.. --.|+|++.|.+|+.|..-...+...++.
T Consensus 575 LT~~E~~EWG--NP~--d~e~y~yik------------SYSPYdNV~a~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~ 638 (682)
T COG1770 575 LTVTEWDEWG--NPL--DPEYYDYIK------------SYSPYDNVEAQPYPAILVTTGLNDPRVQYWEPAKWVAKLREL 638 (682)
T ss_pred CCccchhhhC--CcC--CHHHHHHHh------------hcCchhccccCCCCceEEEccccCCccccchHHHHHHHHhhc
Confidence 0010 111 111111111 2233333332 23578999999999998765555555544
Q ss_pred --C-CcEEE-E-eCCCCCCC
Q 013268 252 --G-DKNII-K-FDGDHNSS 266 (446)
Q Consensus 252 --~-~~~~~-~-~~ggH~~~ 266 (446)
+ +..+. + ..+||...
T Consensus 639 ~td~~plLlkt~M~aGHgG~ 658 (682)
T COG1770 639 KTDGNPLLLKTNMDAGHGGA 658 (682)
T ss_pred ccCCCcEEEEecccccCCCC
Confidence 2 22222 2 34599644
No 139
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=98.87 E-value=2.6e-08 Score=100.74 Aligned_cols=242 Identities=15% Similarity=0.158 Sum_probs=151.2
Q ss_pred ceeeEEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh--hHHHHHHHhccCCcEEEEeCCCCCCCCCCCC
Q 013268 34 SYKRQDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA--DANEAAVILLPSNITLFTLDFSGSGLSDGDY 111 (446)
Q Consensus 34 ~~~~~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~--~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~ 111 (446)
.|..+.+.+.+.||+.+...+..-+.....++.|.+|+.+|..+-.- .|..-...|.++|+.....|.||-|+-+...
T Consensus 438 ~y~~~r~~~~SkDGt~VPM~Iv~kk~~k~dg~~P~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~W 517 (712)
T KOG2237|consen 438 DYVVERIEVSSKDGTKVPMFIVYKKDIKLDGSKPLLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQW 517 (712)
T ss_pred ceEEEEEEEecCCCCccceEEEEechhhhcCCCceEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccch
Confidence 46788899999999999988776554445578999999988875322 2333344677899999999999998776443
Q ss_pred cCCCc-----chHHHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHH-HHHH
Q 013268 112 VSLGW-----HEKDDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE-LVDV 182 (446)
Q Consensus 112 ~~~~~-----~~~~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~-~~~~ 182 (446)
...+. ...+|+.+.++||.++.-. .+..+.|.|.||.++..+..++|+ +.++|+-.|+.++...... ....
T Consensus 518 Hk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~VpfmDvL~t~~~tilpl 597 (712)
T KOG2237|consen 518 HKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPFMDVLNTHKDTILPL 597 (712)
T ss_pred hhccchhhhcccHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcceehhhhhccCcccc
Confidence 33321 2389999999999988433 789999999999999999999999 8999998888876443211 0000
Q ss_pred HhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCC-CC-CcEEEEEeCCCCCCChHHHHHHHHHcC---------
Q 013268 183 YKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPK-TF-IPALFGHASEDKFIRARHSDLIFNAYA--------- 251 (446)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-i~-~PvLii~G~~D~~vp~~~~~~l~~~l~--------- 251 (446)
+..-+..+..+. .......+..+.+...+.+ .. .-+|+..+.+|..|++-++.++.++++
T Consensus 598 t~sd~ee~g~p~---------~~~~~~~i~~y~pv~~i~~q~~YPS~lvtta~hD~RV~~~~~~K~vAklre~~~~~~~q 668 (712)
T KOG2237|consen 598 TTSDYEEWGNPE---------DFEDLIKISPYSPVDNIKKQVQYPSMLVTTADHDDRVGPLESLKWVAKLREATCDSLKQ 668 (712)
T ss_pred chhhhcccCChh---------hhhhhheecccCccCCCchhccCcceEEeeccCCCcccccchHHHHHHHHHHhhcchhc
Confidence 000000000000 0000011112222222211 11 247889999988887776666665543
Q ss_pred -CCcEEEEeCC-CCCCCChh-HH---HHHHHHHHHhhcC
Q 013268 252 -GDKNIIKFDG-DHNSSRPQ-FY---YDSVSIFFYNVLH 284 (446)
Q Consensus 252 -~~~~~~~~~g-gH~~~~~~-~~---~~~i~~Fl~~~L~ 284 (446)
++.-+.+..+ ||..-.+. .. .....+||.+.+.
T Consensus 669 ~~pvll~i~~~agH~~~~~~~k~~~E~a~~yaFl~K~~~ 707 (712)
T KOG2237|consen 669 TNPVLLRIETKAGHGAEKPRFKQIEEAAFRYAFLAKMLN 707 (712)
T ss_pred CCCEEEEEecCCccccCCchHHHHHHHHHHHHHHHHHhc
Confidence 1233334444 99976331 11 2234567777664
No 140
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.86 E-value=1.7e-07 Score=89.10 Aligned_cols=120 Identities=16% Similarity=0.208 Sum_probs=96.9
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccC---------CcEEEEeCCCCCCCCCCCCcCC
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPS---------NITLFTLDFSGSGLSDGDYVSL 114 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~---------Gy~Vi~~D~~G~G~S~~~~~~~ 114 (446)
...|.+++..+..|...+..+.--+++++||++|+-..+..++..|... -|.||++.+||+|.|++... .
T Consensus 130 eIeGL~iHFlhvk~p~~k~~k~v~PlLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk-~ 208 (469)
T KOG2565|consen 130 EIEGLKIHFLHVKPPQKKKKKKVKPLLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSK-T 208 (469)
T ss_pred hhcceeEEEEEecCCccccCCcccceEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCcc-C
Confidence 3579999998888765444455568999999999999998888877553 37899999999999996543 3
Q ss_pred CcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEE
Q 013268 115 GWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVL 165 (446)
Q Consensus 115 ~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl 165 (446)
++. ...++.++.-|.-+++.++..|-|--||..++..+|..+|+ |.|+=+
T Consensus 209 GFn-~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHl 259 (469)
T KOG2565|consen 209 GFN-AAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHL 259 (469)
T ss_pred Ccc-HHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhh
Confidence 333 46677778888888899999999999999999999999998 766544
No 141
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=98.81 E-value=2.2e-06 Score=79.46 Aligned_cols=236 Identities=13% Similarity=0.099 Sum_probs=140.9
Q ss_pred EEEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh-HHHH-----HHHhccCCcEEEEeCCCCCCCCCCC-
Q 013268 38 QDLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD-ANEA-----AVILLPSNITLFTLDFSGSGLSDGD- 110 (446)
Q Consensus 38 ~~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~-~~~~-----~~~L~~~Gy~Vi~~D~~G~G~S~~~- 110 (446)
++..+.+..| .+.+.++.- .++++|+||-.|..|-+... |..+ +..+..+ |.|+-+|.||+-.....
T Consensus 23 ~e~~V~T~~G-~v~V~V~Gd----~~~~kpaiiTyhDlglN~~scFq~ff~~p~m~ei~~~-fcv~HV~~PGqe~gAp~~ 96 (326)
T KOG2931|consen 23 QEHDVETAHG-VVHVTVYGD----PKGNKPAIITYHDLGLNHKSCFQGFFNFPDMAEILEH-FCVYHVDAPGQEDGAPSF 96 (326)
T ss_pred eeeeeccccc-cEEEEEecC----CCCCCceEEEecccccchHhHhHHhhcCHhHHHHHhh-eEEEecCCCccccCCccC
Confidence 4445555555 455555532 12368899999999977655 5544 3456665 99999999999654322
Q ss_pred CcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhh----
Q 013268 111 YVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKI---- 185 (446)
Q Consensus 111 ~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~---- 185 (446)
+..+.+-..+++.+.+..+.++++.+.|+-+|--.|+++-.++|..+|+ |-|+||+++.......+.-....+..
T Consensus 97 p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~~s~~l~ 176 (326)
T KOG2931|consen 97 PEGYPYPSMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKVSSNLLY 176 (326)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHHHHHHHH
Confidence 2222344578888888888888899999999999999999999999999 99999987654322211111110000
Q ss_pred --hCCchhH----------------HHHHHHHHHHHhhhhc------c---cccccchhhhCC----CCCCcEEEEEeCC
Q 013268 186 --RLPKFTV----------------KMAVQYMRRVIQKKAK------F---DIMDLNCLKLAP----KTFIPALFGHASE 234 (446)
Q Consensus 186 --~~~~~~~----------------~~~~~~~~~~~~~~~~------~---~~~~~~~~~~l~----~i~~PvLii~G~~ 234 (446)
....... ....+..+..+..... | ...+.+...... .++||+|++.|++
T Consensus 177 ~~Gmt~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~ 256 (326)
T KOG2931|consen 177 YYGMTQGVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN 256 (326)
T ss_pred hhchhhhHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC
Confidence 0000000 0111111111111111 0 000111111112 4669999999999
Q ss_pred CCCCChHHHHHHHHHcC-CCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHh
Q 013268 235 DKFIRARHSDLIFNAYA-GDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (446)
Q Consensus 235 D~~vp~~~~~~l~~~l~-~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~ 281 (446)
-+.+ +.+..+..++. ....++.+.+ |-... .|..+.+.+.-|+.-
T Consensus 257 Sp~~--~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG 305 (326)
T KOG2931|consen 257 SPHV--SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFLQG 305 (326)
T ss_pred Cchh--hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHHcc
Confidence 8874 45566666664 3455666654 55544 688888888777754
No 142
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=98.79 E-value=5.5e-08 Score=90.46 Aligned_cols=108 Identities=18% Similarity=0.277 Sum_probs=76.5
Q ss_pred CCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCC------C---CCcCCCc-----------------
Q 013268 63 DTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD------G---DYVSLGW----------------- 116 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~------~---~~~~~~~----------------- 116 (446)
+.+.|+|||.||+++++..|..+.-.|+++||.|.++++|-+..+- . ......|
T Consensus 115 ~~k~PvvvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irN 194 (399)
T KOG3847|consen 115 NDKYPVVVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRN 194 (399)
T ss_pred CCCccEEEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeC
Confidence 5678999999999999999999999999999999999999764321 0 0000000
Q ss_pred ----chHHHHHHHHHHHHh-----------------------cCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCc
Q 013268 117 ----HEKDDLKVVVSYLRG-----------------------NKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (446)
Q Consensus 117 ----~~~~D~~~~i~~l~~-----------------------~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~ 169 (446)
.-+.....+++-|++ .....++.++|||+||+.++...+.+.++++.|+..++
T Consensus 195 eqv~~R~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~FrcaI~lD~W 274 (399)
T KOG3847|consen 195 EQVGQRAQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTDFRCAIALDAW 274 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccceeeeeeeeee
Confidence 002222333333322 22235789999999999999999988889988877665
Q ss_pred c
Q 013268 170 S 170 (446)
Q Consensus 170 ~ 170 (446)
.
T Consensus 275 M 275 (399)
T KOG3847|consen 275 M 275 (399)
T ss_pred e
Confidence 4
No 143
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.79 E-value=9.1e-08 Score=84.74 Aligned_cols=176 Identities=19% Similarity=0.247 Sum_probs=112.0
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCC--CCCc----------CCCcch---HHHHHHHHHHHH
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSD--GDYV----------SLGWHE---KDDLKVVVSYLR 130 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~--~~~~----------~~~~~~---~~D~~~~i~~l~ 130 (446)
..+||++||.+.+...|.++++.+.-++...|++.-|-.-.+. +... .....+ .....+.+..+.
T Consensus 3 ~atIi~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li 82 (206)
T KOG2112|consen 3 TATIIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLI 82 (206)
T ss_pred eEEEEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHH
Confidence 3589999999999999988888877778888888655322111 1000 001111 222223333332
Q ss_pred h----c-CCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHh
Q 013268 131 G----N-KQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQ 204 (446)
Q Consensus 131 ~----~-~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (446)
+ . ....+|++-|+||||.+++..+..++. +.+++..+++...... .++...
T Consensus 83 ~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p~~~~----------~~~~~~------------- 139 (206)
T KOG2112|consen 83 DNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLPRASI----------GLPGWL------------- 139 (206)
T ss_pred HHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccccchh----------hccCCc-------------
Confidence 2 2 123789999999999999999999976 7777766665431000 011100
Q ss_pred hhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-CCCCCChhHHHHHHHHHHH
Q 013268 205 KKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSSRPQFYYDSVSIFFY 280 (446)
Q Consensus 205 ~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~ 280 (446)
...+ ..|++..||+.|++||....+...+.+. ..+++..|+| +|... +++ .+.+..|+.
T Consensus 140 -------------~~~~--~~~i~~~Hg~~d~~vp~~~g~~s~~~l~~~~~~~~f~~y~g~~h~~~-~~e-~~~~~~~~~ 202 (206)
T KOG2112|consen 140 -------------PGVN--YTPILLCHGTADPLVPFRFGEKSAQFLKSLGVRVTFKPYPGLGHSTS-PQE-LDDLKSWIK 202 (206)
T ss_pred -------------cccC--cchhheecccCCceeehHHHHHHHHHHHHcCCceeeeecCCcccccc-HHH-HHHHHHHHH
Confidence 0001 5799999999999999986666555443 4577888899 99866 223 466778877
Q ss_pred h
Q 013268 281 N 281 (446)
Q Consensus 281 ~ 281 (446)
+
T Consensus 203 ~ 203 (206)
T KOG2112|consen 203 T 203 (206)
T ss_pred H
Confidence 6
No 144
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.74 E-value=8.6e-08 Score=88.62 Aligned_cols=105 Identities=19% Similarity=0.183 Sum_probs=73.2
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhc--------cCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcC---
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILL--------PSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK--- 133 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~--------~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~--- 133 (446)
.+.+|||+||.+|+...++.++..+. ...+.++++|+......-.... . ....+.+...++.+.+.+
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~-l-~~q~~~~~~~i~~i~~~~~~~ 80 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRT-L-QRQAEFLAEAIKYILELYKSN 80 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCcccccccccc-H-HHHHHHHHHHHHHHHHhhhhc
Confidence 46789999999999888777765542 2258899999876432211100 0 122456677777776665
Q ss_pred --CCCcEEEEEechhHHHHHHHHHhCC---C-ccEEEEeCCccC
Q 013268 134 --QTSRIGLWGRSMGAVTSLLYGAEDP---S-IAGMVLDSAFSD 171 (446)
Q Consensus 134 --~~~~i~lvG~S~GG~ial~~a~~~p---~-v~~lVl~sp~~~ 171 (446)
+..+|+|+||||||.+|-.++...+ + |+.+|.++.+..
T Consensus 81 ~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~ 124 (225)
T PF07819_consen 81 RPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHR 124 (225)
T ss_pred cCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCC
Confidence 4489999999999999988877644 2 899998876653
No 145
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.73 E-value=5.6e-07 Score=104.29 Aligned_cols=206 Identities=11% Similarity=0.040 Sum_probs=116.2
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH-HHHHHHhcCCCCcEEEEEe
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~-~i~~l~~~~~~~~i~lvG~ 143 (446)
..|.++++||++++...|..++..|.. ++.|++++.+|+|..... .. .++++.+ .++.+.......++.++||
T Consensus 1067 ~~~~l~~lh~~~g~~~~~~~l~~~l~~-~~~v~~~~~~g~~~~~~~--~~---~l~~la~~~~~~i~~~~~~~p~~l~G~ 1140 (1296)
T PRK10252 1067 DGPTLFCFHPASGFAWQFSVLSRYLDP-QWSIYGIQSPRPDGPMQT--AT---SLDEVCEAHLATLLEQQPHGPYHLLGY 1140 (1296)
T ss_pred CCCCeEEecCCCCchHHHHHHHHhcCC-CCcEEEEECCCCCCCCCC--CC---CHHHHHHHHHHHHHhhCCCCCEEEEEe
Confidence 347899999999999999999988865 699999999999865321 11 2333333 2333333323368999999
Q ss_pred chhHHHHHHHHHh---CCC-ccEEEEeCCccCHH-------------HHHHHHH---HHHh-hhCCchhHHHHHHHHHHH
Q 013268 144 SMGAVTSLLYGAE---DPS-IAGMVLDSAFSDLF-------------DLMLELV---DVYK-IRLPKFTVKMAVQYMRRV 202 (446)
Q Consensus 144 S~GG~ial~~a~~---~p~-v~~lVl~sp~~~~~-------------~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~ 202 (446)
||||.+|..+|.+ .+. +..++++.+..... ....... .... ......... ....+...
T Consensus 1141 S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 1219 (1296)
T PRK10252 1141 SLGGTLAQGIAARLRARGEEVAFLGLLDTWPPETQNWREKEANGLDPEVLAEIDREREAFLAAQQGSLSTE-LFTTIEGN 1219 (1296)
T ss_pred chhhHHHHHHHHHHHHcCCceeEEEEecCCCcccccccccccccCChhhhhhhhhhHHHHHHhhhccccHH-HHHHHHHH
Confidence 9999999999986 344 88888876533210 0000000 0000 000000000 00000000
Q ss_pred HhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCCChhHHHHHHHHHHHhh
Q 013268 203 IQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFYNV 282 (446)
Q Consensus 203 ~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~~~~~~~~~i~~Fl~~~ 282 (446)
+..... .........+.+|++++.+..|..........+.+.. +...+..++|+|+.+........+.+++.+.
T Consensus 1220 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~-~~~~~~~v~g~H~~~~~~~~~~~~~~~l~~~ 1293 (1296)
T PRK10252 1220 YADAVR-----LLTTAHSVPFDGKATLFVAERTLQEGMSPEQAWSPWI-AELDVYRQDCAHVDIISPEAFEKIGPILRAT 1293 (1296)
T ss_pred HHHHHH-----HHHhccCCcccCceEEEEcCCCCcccCCcccchhhhc-CCCEEEECCCCHHHHCCcHHHHHHHHHHHHH
Confidence 000000 0000123456789999999998765544333333333 5667788899998763333446666666665
Q ss_pred c
Q 013268 283 L 283 (446)
Q Consensus 283 L 283 (446)
+
T Consensus 1294 l 1294 (1296)
T PRK10252 1294 L 1294 (1296)
T ss_pred h
Confidence 4
No 146
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.73 E-value=6.9e-07 Score=76.95 Aligned_cols=169 Identities=12% Similarity=0.070 Sum_probs=99.0
Q ss_pred cEEEEECCCCCChh-hHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEech
Q 013268 67 PCVVYCHGNSGCRA-DANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSM 145 (446)
Q Consensus 67 p~VVllHG~g~~~~-~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~ 145 (446)
+.+|++||++++.. .|+...+ ++--++-.+++.. +. .-..+|-.+.++...+.. .++++||+||+
T Consensus 3 ~~~lIVpG~~~Sg~~HWq~~we---~~l~~a~rveq~~-------w~---~P~~~dWi~~l~~~v~a~-~~~~vlVAHSL 68 (181)
T COG3545 3 TDVLIVPGYGGSGPNHWQSRWE---SALPNARRVEQDD-------WE---APVLDDWIARLEKEVNAA-EGPVVLVAHSL 68 (181)
T ss_pred ceEEEecCCCCCChhHHHHHHH---hhCccchhcccCC-------CC---CCCHHHHHHHHHHHHhcc-CCCeEEEEecc
Confidence 57899999997753 3443221 2111122233220 00 011344444333332221 35699999999
Q ss_pred hHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCC
Q 013268 146 GAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF 224 (446)
Q Consensus 146 GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 224 (446)
|+.+++.++..... |+|+++++|+.--...... .....++. ....+..
T Consensus 69 Gc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~~------------------------------~~~~tf~~-~p~~~lp 117 (181)
T COG3545 69 GCATVAHWAEHIQRQVAGALLVAPPDVSRPEIRP------------------------------KHLMTFDP-IPREPLP 117 (181)
T ss_pred cHHHHHHHHHhhhhccceEEEecCCCccccccch------------------------------hhccccCC-CccccCC
Confidence 99999999988655 9999999998532110000 00000111 1122344
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC-----ChhHHHHHHHHHHHh
Q 013268 225 IPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS-----RPQFYYDSVSIFFYN 281 (446)
Q Consensus 225 ~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~-----~~~~~~~~i~~Fl~~ 281 (446)
-|.+++...+|++++++.++.+.+.+... .+..-++||+.. .-.+....+.+|+.+
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~~wgs~-lv~~g~~GHiN~~sG~g~wpeg~~~l~~~~s~ 178 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLANAWGSA-LVDVGEGGHINAESGFGPWPEGYALLAQLLSR 178 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHHhccHh-heecccccccchhhcCCCcHHHHHHHHHHhhh
Confidence 69999999999999999999999998743 244445699854 223455556565543
No 147
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=98.66 E-value=2.4e-06 Score=83.70 Aligned_cols=155 Identities=13% Similarity=0.136 Sum_probs=113.1
Q ss_pred CCCcEEEEEechhHHHHHHHHHhCCCccEEEEeC-CccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccc-c
Q 013268 134 QTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFD-I 211 (446)
Q Consensus 134 ~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~s-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 211 (446)
.++++++.|.|==|..++..|+.+|+|++++.+. ...++...+....+.++...+.-.......-+...+....... .
T Consensus 170 ~i~~FvV~GaSKRGWTtWltaa~D~RV~aivP~Vid~LN~~~~l~h~y~~yG~~ws~a~~dY~~~gi~~~l~tp~f~~L~ 249 (367)
T PF10142_consen 170 NIEKFVVTGASKRGWTTWLTAAVDPRVKAIVPIVIDVLNMKANLEHQYRSYGGNWSFAFQDYYNEGITQQLDTPEFDKLM 249 (367)
T ss_pred CccEEEEeCCchHhHHHHHhhccCcceeEEeeEEEccCCcHHHHHHHHHHhCCCCccchhhhhHhCchhhcCCHHHHHHH
Confidence 4589999999999999999999888899998643 4557777777777766633332222222211111111111111 1
Q ss_pred cccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhhcCCCCCC
Q 013268 212 MDLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNVLHPPQIP 289 (446)
Q Consensus 212 ~~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~L~~~~~~ 289 (446)
.-.|+.....++++|.++|.|..|++..+..+.-++..+++.+.+.++|. +|.... ..+.+.+..|+...+....-|
T Consensus 250 ~ivDP~~Y~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K~lr~vPN~~H~~~~-~~~~~~l~~f~~~~~~~~~lP 327 (367)
T PF10142_consen 250 QIVDPYSYRDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGEKYLRYVPNAGHSLIG-SDVVQSLRAFYNRIQNGRPLP 327 (367)
T ss_pred HhcCHHHHHHhcCccEEEEecCCCceeccCchHHHHhhCCCCeeEEeCCCCCcccch-HHHHHHHHHHHHHHHcCCCCC
Confidence 12467777788899999999999999999999999999999999999998 999886 677888999999987665444
No 148
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=98.59 E-value=3.3e-07 Score=87.66 Aligned_cols=233 Identities=21% Similarity=0.194 Sum_probs=128.6
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCC----C----cc--
Q 013268 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSL----G----WH-- 117 (446)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~----~----~~-- 117 (446)
..+.+.++.|......++.|.+++.||+++........+..++..++.++..+....|.+....... . ..
T Consensus 31 ~~~~~~l~~p~~~~~~~~~p~v~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 110 (299)
T COG1073 31 IALAAVLHLPPSGNEEKKLPAVVFLHGFGSSKEQSLGYAVLLAEKGYRVLAGDASLFGESGGDPRGLADSEGYAEDFSAA 110 (299)
T ss_pred ceeeeEEEecCCCCccccCceEEeccCccccccCcchHHHHhhhceeEEeeeccccccccccccccccCccccccccchh
Confidence 6678888888643222678999999999988777655788888889998888763333332211110 0 00
Q ss_pred -hHHHHHHHH--HHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC---ccEEEEeCCccC----HH------HHHHHHHH
Q 013268 118 -EKDDLKVVV--SYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFSD----LF------DLMLELVD 181 (446)
Q Consensus 118 -~~~D~~~~i--~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~---v~~lVl~sp~~~----~~------~~~~~~~~ 181 (446)
.......++ ++.......++....|.++|+..+..++...+. ...++....... +. ........
T Consensus 111 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~g~~~~~~~~~~~~~~~~~~~~ 190 (299)
T COG1073 111 VLLLLSEGVLDKDYRLLGASLGPRILAGLSLGGPSAGALLAWGPTRLDASRIVVWGESLGGALALLLLGANPELARELID 190 (299)
T ss_pred heeeeccccccHHHHHHhhhcCcceEEEEEeeccchHHHhhcchhHHHhhcccceeeccCceeeccccccchHHHHhhhh
Confidence 000000000 011111112678889999998888888877652 222222211111 00 01111111
Q ss_pred HHhhhCCchhH-HHHHHHHHHHHhhhhcccccccchhhhCCCCC-CcEEEEEeCCCCCCChHHHHHHHHHcCC-CcEEEE
Q 013268 182 VYKIRLPKFTV-KMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTF-IPALFGHASEDKFIRARHSDLIFNAYAG-DKNIIK 258 (446)
Q Consensus 182 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~-~PvLii~G~~D~~vp~~~~~~l~~~l~~-~~~~~~ 258 (446)
.+......... .....+... ... .......+....+.++. +|+|+++|.+|..||...+..++..... .+...+
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~d~~~~~~~i~~~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~ 267 (299)
T COG1073 191 YLITPGGFAPLPAPEAPLDTL--PLR-AVLLLLLDPFDDAEKISPRPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLF 267 (299)
T ss_pred hhccCCCCCCCCccccccccc--ccc-hhhhccCcchhhHhhcCCcceEEEecCCCcccchhhhHHHHhhhccCCceEEE
Confidence 11111111110 000000000 000 00122223344455565 7999999999999999999999998886 666777
Q ss_pred eCC-CCCCC---Ch--hHHHHHHHHHHHhhc
Q 013268 259 FDG-DHNSS---RP--QFYYDSVSIFFYNVL 283 (446)
Q Consensus 259 ~~g-gH~~~---~~--~~~~~~i~~Fl~~~L 283 (446)
+++ +|... .+ ++....+.+|+.+.+
T Consensus 268 ~~~~~H~~~~~~~~~~~~~~~~~~~f~~~~l 298 (299)
T COG1073 268 VPGGGHIDLYDNPPAVEQALDKLAEFLERHL 298 (299)
T ss_pred ecCCccccccCccHHHHHHHHHHHHHHHHhc
Confidence 665 89866 22 268888999998875
No 149
>KOG3101 consensus Esterase D [General function prediction only]
Probab=98.57 E-value=5.2e-07 Score=79.48 Aligned_cols=203 Identities=17% Similarity=0.232 Sum_probs=115.8
Q ss_pred CcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHH---HHHHhccCCcEEEEeCCCCCCCCC-CCCc--CCC-----
Q 013268 47 GHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANE---AAVILLPSNITLFTLDFSGSGLSD-GDYV--SLG----- 115 (446)
Q Consensus 47 G~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~---~~~~L~~~Gy~Vi~~D~~G~G~S~-~~~~--~~~----- 115 (446)
+..+..-+|+|+..+.+++-|++.++.|+....+.+.. +.+...++|+.|+.+|-.-.|..- ++.. +++
T Consensus 25 ~c~Mtf~vylPp~a~~~k~~P~lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGF 104 (283)
T KOG3101|consen 25 KCSMTFGVYLPPDAPRGKRCPVLFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGF 104 (283)
T ss_pred ccceEEEEecCCCcccCCcCceEEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCcee
Confidence 45577778999888888889999999999988777643 234456679999999975444221 1111 111
Q ss_pred --------cch-HHHHHHHHHHHHhcC-------CCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHH
Q 013268 116 --------WHE-KDDLKVVVSYLRGNK-------QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLE 178 (446)
Q Consensus 116 --------~~~-~~D~~~~i~~l~~~~-------~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~ 178 (446)
|.. .+...-+++.|.+.. +..++.|.||||||.-|+..+.++|. .+.+-..+|..+.....+
T Consensus 105 YvnAt~epw~~~yrMYdYv~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW- 183 (283)
T KOG3101|consen 105 YVNATQEPWAKHYRMYDYVVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW- 183 (283)
T ss_pred EEecccchHhhhhhHHHHHHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc-
Confidence 100 122222333332221 22679999999999999999999887 666666666655322111
Q ss_pred HHHHHhhhCCchhHHHHHHHHHHHHhhh-hccccc-ccchhhhCCCCCCcEEEEEeCCCCCCChH-HHHHHHHHcC----
Q 013268 179 LVDVYKIRLPKFTVKMAVQYMRRVIQKK-AKFDIM-DLNCLKLAPKTFIPALFGHASEDKFIRAR-HSDLIFNAYA---- 251 (446)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~~i~~PvLii~G~~D~~vp~~-~~~~l~~~l~---- 251 (446)
....+...+... ..+... ....+...+....-+||=+|..|.+..-+ --+.+.++..
T Consensus 184 ----------------GqKAf~gYLG~~ka~W~~yDat~lik~y~~~~~~ilIdqG~~D~Fl~~qLlPe~l~~a~~~~~~ 247 (283)
T KOG3101|consen 184 ----------------GQKAFTGYLGDNKAQWEAYDATHLIKNYRGVGDDILIDQGAADNFLAEQLLPENLLEACKATWQ 247 (283)
T ss_pred ----------------hHHHhhcccCCChHHHhhcchHHHHHhcCCCCccEEEecCccchhhhhhcChHHHHHHhhcccc
Confidence 111111111110 000000 01123444555667999999999987622 1123333333
Q ss_pred CCcEEEEeCC-CCCCC
Q 013268 252 GDKNIIKFDG-DHNSS 266 (446)
Q Consensus 252 ~~~~~~~~~g-gH~~~ 266 (446)
....+...+| +|...
T Consensus 248 ~~v~~r~~~gyDHSYy 263 (283)
T KOG3101|consen 248 APVVFRLQEGYDHSYY 263 (283)
T ss_pred ccEEEEeecCCCccee
Confidence 3445566678 88754
No 150
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.45 E-value=4.8e-06 Score=75.70 Aligned_cols=199 Identities=21% Similarity=0.218 Sum_probs=119.9
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCC-----cEEEEeCCCCCCCCCCCCcCC----------------CcchHHHHHH
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSN-----ITLFTLDFSGSGLSDGDYVSL----------------GWHEKDDLKV 124 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~G-----y~Vi~~D~~G~G~S~~~~~~~----------------~~~~~~D~~~ 124 (446)
.-+.||+||.+|+......++..|...+ --++.+|--|.=...|..... ......-+..
T Consensus 45 ~iPTIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~ 124 (288)
T COG4814 45 AIPTIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKK 124 (288)
T ss_pred ccceEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHH
Confidence 3457899999999999999988887754 246667766631111111100 0111455788
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC------CCccEEEEeCCccCHHHHH-HHHHHHHhhhCCchhHHHHHH
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED------PSIAGMVLDSAFSDLFDLM-LELVDVYKIRLPKFTVKMAVQ 197 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~------p~v~~lVl~sp~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 197 (446)
++.+|.+++++.++-++||||||.....++..+ |.++.+|.+++..+..... .+-.......-+...-....+
T Consensus 125 ~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN~~~l~~de~v~~v~~~~~~~~~t~y~~ 204 (288)
T COG4814 125 AMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFNVGNLVPDETVTDVLKDGPGLIKTPYYD 204 (288)
T ss_pred HHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEecccccccccCCCcchheeeccCccccCcHHHH
Confidence 999999999999999999999999999998874 5588999887766511100 000000000000000000011
Q ss_pred HHHHHHhhhhcccccccchhhhCCC--CCCcEEEEEeCCC------CCCChHHHHHHHHHcCCC-cEE--EEeCC---CC
Q 013268 198 YMRRVIQKKAKFDIMDLNCLKLAPK--TFIPALFGHASED------KFIRARHSDLIFNAYAGD-KNI--IKFDG---DH 263 (446)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~l~~--i~~PvLii~G~~D------~~vp~~~~~~l~~~l~~~-~~~--~~~~g---gH 263 (446)
++. ....+ -.+-+|+|.|+-| -.||...+..++..+++. +.+ .+++| .|
T Consensus 205 y~~-----------------~n~k~v~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~lf~~~~ksy~e~~~~Gk~a~H 267 (288)
T COG4814 205 YIA-----------------KNYKKVSPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHLFKKNGKSYIESLYKGKDARH 267 (288)
T ss_pred HHH-----------------hcceeCCCCcEEEEEecccccCCcCCCceechHhHHHHHHhccCcceeEEEeeeCCcchh
Confidence 110 11111 1356899999855 467788888888777743 322 24554 57
Q ss_pred CCC-ChhHHHHHHHHHHHh
Q 013268 264 NSS-RPQFYYDSVSIFFYN 281 (446)
Q Consensus 264 ~~~-~~~~~~~~i~~Fl~~ 281 (446)
... +...+.+.+..||-+
T Consensus 268 s~lhen~~v~~yv~~FLw~ 286 (288)
T COG4814 268 SKLHENPTVAKYVKNFLWE 286 (288)
T ss_pred hccCCChhHHHHHHHHhhc
Confidence 755 556788888888854
No 151
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.41 E-value=8.3e-05 Score=72.17 Aligned_cols=202 Identities=14% Similarity=0.107 Sum_probs=123.9
Q ss_pred EEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCCh---hhHHHHHHHhccCCcEEEEeCCCCC--CCCC-----
Q 013268 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFSGS--GLSD----- 108 (446)
Q Consensus 39 ~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~---~~~~~~~~~L~~~Gy~Vi~~D~~G~--G~S~----- 108 (446)
++..-..++..+-+ +|.|.. .+....+||++||.+.+. .....+...|.++|+.++++.+|.- ....
T Consensus 63 e~~~L~~~~~~fla-L~~~~~--~~~~~G~vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~ 139 (310)
T PF12048_consen 63 EVQWLQAGEERFLA-LWRPAN--SAKPQGAVIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATE 139 (310)
T ss_pred hcEEeecCCEEEEE-EEeccc--CCCCceEEEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCC
Confidence 33333344444443 677753 456678999999999775 3345677889999999999998861 1000
Q ss_pred -------C--CCcCC----------------Cc--chHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC--
Q 013268 109 -------G--DYVSL----------------GW--HEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-- 159 (446)
Q Consensus 109 -------~--~~~~~----------------~~--~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-- 159 (446)
+ ..... .+ .....+.+++.++.++ +..+++|+||+.|+.+++.+.+..+.
T Consensus 140 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ari~Aa~~~~~~~-~~~~ivlIg~G~gA~~~~~~la~~~~~~ 218 (310)
T PF12048_consen 140 AEEVPSAGDQQLSQPSDEPSPASAQEAEAREAYEERLFARIEAAIAFAQQQ-GGKNIVLIGHGTGAGWAARYLAEKPPPM 218 (310)
T ss_pred CCCCCCCCCCCcCCCCCCCccccccHhHHhHHHHHHHHHHHHHHHHHHHhc-CCceEEEEEeChhHHHHHHHHhcCCCcc
Confidence 0 00000 00 0133456666666665 45669999999999999999999876
Q ss_pred ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCcEEEEEeCCCCCCC
Q 013268 160 IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIPALFGHASEDKFIR 239 (446)
Q Consensus 160 v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~PvLii~G~~D~~vp 239 (446)
++++|++++.......- ......+.++++|||=|++.+...+
T Consensus 219 ~daLV~I~a~~p~~~~n-------------------------------------~~l~~~la~l~iPvLDi~~~~~~~~- 260 (310)
T PF12048_consen 219 PDALVLINAYWPQPDRN-------------------------------------PALAEQLAQLKIPVLDIYSADNPAS- 260 (310)
T ss_pred cCeEEEEeCCCCcchhh-------------------------------------hhHHHHhhccCCCEEEEecCCChHH-
Confidence 89999999876532210 0122456678899998888773322
Q ss_pred hHHHHH---HHHHcC-CCcEEEEeCC-CCCCC-ChhHHHHHHHHHHHhh
Q 013268 240 ARHSDL---IFNAYA-GDKNIIKFDG-DHNSS-RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 240 ~~~~~~---l~~~l~-~~~~~~~~~g-gH~~~-~~~~~~~~i~~Fl~~~ 282 (446)
...+.. ..++.. ...+-+.+.+ .|... ..+.+.++|..|+.++
T Consensus 261 ~~~a~~R~~~a~r~~~~~YrQ~~L~~~~~~~~~~~~~l~~rIrGWL~~~ 309 (310)
T PF12048_consen 261 QQTAKQRKQAAKRNKKPDYRQIQLPGLPDNPSGWQEQLLRRIRGWLKRH 309 (310)
T ss_pred HHHHHHHHHHHHhccCCCceeEecCCCCCChhhHHHHHHHHHHHHHHhh
Confidence 222211 111111 1222233444 55544 3444889999999865
No 152
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.41 E-value=5.7e-05 Score=68.57 Aligned_cols=218 Identities=13% Similarity=0.138 Sum_probs=121.1
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHHHhccC---CcEEEEeCCCCCCCCC---CCCcCCC----cchHHHHHHHHHHHHh
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPS---NITLFTLDFSGSGLSD---GDYVSLG----WHEKDDLKVVVSYLRG 131 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~---Gy~Vi~~D~~G~G~S~---~~~~~~~----~~~~~D~~~~i~~l~~ 131 (446)
....++.|+++.|.+|....|..++..|... .+.++.+-..||-.-. ....... +.-.+.+.--++++++
T Consensus 25 ~~~~~~li~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~ 104 (301)
T KOG3975|consen 25 SGEDKPLIVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKE 104 (301)
T ss_pred CCCCceEEEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHH
Confidence 4467899999999999999998888776543 2558888888886544 1111111 1113456666778877
Q ss_pred cCCC-CcEEEEEechhHHHHHHHHHhCC-C--ccEEEEeCCccC--------------------------------HHHH
Q 013268 132 NKQT-SRIGLWGRSMGAVTSLLYGAEDP-S--IAGMVLDSAFSD--------------------------------LFDL 175 (446)
Q Consensus 132 ~~~~-~~i~lvG~S~GG~ial~~a~~~p-~--v~~lVl~sp~~~--------------------------------~~~~ 175 (446)
.... .+++++|||.|+++.+.+..... . |..++++-|-.. +...
T Consensus 105 ~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~hv~~lt~yi~~~~lp~~ 184 (301)
T KOG3975|consen 105 YVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLPHVVSLTSYIYWILLPGF 184 (301)
T ss_pred hCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeehhhhheeeeeeeecChHH
Confidence 7655 79999999999999999987533 2 555555433110 0011
Q ss_pred HHHHHHHHhhhCCchhHHHH---HHHHHHHH-hhhhcccccccc-----hhhhCCCCCCcEEEEEeCCCCCCChHHHHHH
Q 013268 176 MLELVDVYKIRLPKFTVKMA---VQYMRRVI-QKKAKFDIMDLN-----CLKLAPKTFIPALFGHASEDKFIRARHSDLI 246 (446)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~-----~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l 246 (446)
.+.++.......++.+.... ..+..... .........+.. ..+.+.+-.+-+.+..|..|..+|.+....+
T Consensus 185 ir~~Li~~~l~~~n~p~e~l~tal~l~h~~v~rn~v~la~qEm~eV~~~d~e~~een~d~l~Fyygt~DgW~p~~~~d~~ 264 (301)
T KOG3975|consen 185 IRFILIKFMLCGSNGPQEFLSTALFLTHPQVVRNSVGLAAQEMEEVTTRDIEYCEENLDSLWFYYGTNDGWVPSHYYDYY 264 (301)
T ss_pred HHHHHHHHhcccCCCcHHHHhhHHHhhcHHHHHHHhhhchHHHHHHHHhHHHHHHhcCcEEEEEccCCCCCcchHHHHHH
Confidence 11111111111122111111 00000000 000000000000 0112223346788999999999999999999
Q ss_pred HHHcCC-CcEEEEeCCCCCCC--ChhHHHHHHHHHH
Q 013268 247 FNAYAG-DKNIIKFDGDHNSS--RPQFYYDSVSIFF 279 (446)
Q Consensus 247 ~~~l~~-~~~~~~~~ggH~~~--~~~~~~~~i~~Fl 279 (446)
.+.++. +.++-.-...|.+. +.+..+..+.+.+
T Consensus 265 kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~~ 300 (301)
T KOG3975|consen 265 KDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDMI 300 (301)
T ss_pred hhhcchhceeeccccCCcceeecccHHHHHHHHHhh
Confidence 999884 33343322288766 4555555555443
No 153
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=98.41 E-value=2.1e-07 Score=84.98 Aligned_cols=90 Identities=17% Similarity=0.261 Sum_probs=58.7
Q ss_pred cEEEEECCCCC-ChhhHHHHHHHhccCCcE---EEEeCCCCCCCCCCCCc-CCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 013268 67 PCVVYCHGNSG-CRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDYV-SLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (446)
Q Consensus 67 p~VVllHG~g~-~~~~~~~~~~~L~~~Gy~---Vi~~D~~G~G~S~~~~~-~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 141 (446)
.+|||+||.++ ....|..+++.|.++||. |+++++-.......... ...-.....+.+.|+.+++.-+. +|-|+
T Consensus 2 ~PVVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIV 80 (219)
T PF01674_consen 2 RPVVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIV 80 (219)
T ss_dssp --EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEE
T ss_pred CCEEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEE
Confidence 46999999998 567899999999999999 79999954433221100 00112256788888888888788 99999
Q ss_pred EechhHHHHHHHHHhC
Q 013268 142 GRSMGAVTSLLYGAED 157 (446)
Q Consensus 142 G~S~GG~ial~~a~~~ 157 (446)
||||||.++-.+....
T Consensus 81 gHS~G~~iaR~yi~~~ 96 (219)
T PF01674_consen 81 GHSMGGTIARYYIKGG 96 (219)
T ss_dssp EETCHHHHHHHHHHHC
T ss_pred EcCCcCHHHHHHHHHc
Confidence 9999999998887644
No 154
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=98.41 E-value=9.2e-07 Score=89.31 Aligned_cols=93 Identities=12% Similarity=0.019 Sum_probs=74.8
Q ss_pred CChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHh
Q 013268 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 77 ~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
.....|..+++.|.+.||.+ ..|++|+|.+.+..... ....+++.+.++.+.+..+..++.|+||||||.++..++..
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~-~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRL-PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccH-HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHH
Confidence 44577889999999999865 89999999886543211 12367888888888887777899999999999999999988
Q ss_pred CCC-----ccEEEEeCCccC
Q 013268 157 DPS-----IAGMVLDSAFSD 171 (446)
Q Consensus 157 ~p~-----v~~lVl~sp~~~ 171 (446)
+|+ |+.+|+++++..
T Consensus 183 ~p~~~~k~I~~~I~la~P~~ 202 (440)
T PLN02733 183 HSDVFEKYVNSWIAIAAPFQ 202 (440)
T ss_pred CCHhHHhHhccEEEECCCCC
Confidence 875 788898877654
No 155
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=98.36 E-value=9.5e-07 Score=91.81 Aligned_cols=119 Identities=16% Similarity=0.218 Sum_probs=78.3
Q ss_pred EEEEEEEecCCCCCCCCCcEEEEECCCCC---ChhhHHHHHHHhccC--CcEEEEeCCC-C---CCCCCCCCcCCCcchH
Q 013268 49 VLQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADANEAAVILLPS--NITLFTLDFS-G---SGLSDGDYVSLGWHEK 119 (446)
Q Consensus 49 ~L~~~~~~P~~~~~~~~~p~VVllHG~g~---~~~~~~~~~~~L~~~--Gy~Vi~~D~~-G---~G~S~~~~~~~~~~~~ 119 (446)
-|+..+|.|......++.|+||++||++- +...+ ....|+.. ++.|+.++|| | +...... ...+..-.
T Consensus 78 cl~l~i~~p~~~~~~~~~pv~v~ihGG~~~~g~~~~~--~~~~~~~~~~~~~vv~~~yRlg~~g~~~~~~~-~~~~n~g~ 154 (493)
T cd00312 78 CLYLNVYTPKNTKPGNSLPVMVWIHGGGFMFGSGSLY--PGDGLAREGDNVIVVSINYRLGVLGFLSTGDI-ELPGNYGL 154 (493)
T ss_pred CCeEEEEeCCCCCCCCCCCEEEEEcCCccccCCCCCC--ChHHHHhcCCCEEEEEecccccccccccCCCC-CCCcchhH
Confidence 35556888874323467899999999863 22221 12333333 3999999999 3 3222211 11111227
Q ss_pred HHHHHHHHHHHhcC-----CCCcEEEEEechhHHHHHHHHHhCC--C-ccEEEEeCCcc
Q 013268 120 DDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSAFS 170 (446)
Q Consensus 120 ~D~~~~i~~l~~~~-----~~~~i~lvG~S~GG~ial~~a~~~p--~-v~~lVl~sp~~ 170 (446)
.|...+++|++++. +.++|.|+|+|.||.++..++.... . ++++|+.++..
T Consensus 155 ~D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~ 213 (493)
T cd00312 155 KDQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSA 213 (493)
T ss_pred HHHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCc
Confidence 89999999998863 3379999999999999988777632 2 78888877643
No 156
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=98.33 E-value=3.8e-05 Score=71.88 Aligned_cols=204 Identities=16% Similarity=0.101 Sum_probs=115.0
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC--CcEEEEEec
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT--SRIGLWGRS 144 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~--~~i~lvG~S 144 (446)
|+||++--.+........+.+...+.|+.++.+-.+-....... . .....+..+++.+.+.... .+|.+-.+|
T Consensus 1 plvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~---~--~~~~~~~~l~~~l~~~~~~~~~~il~H~FS 75 (240)
T PF05705_consen 1 PLVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPS---K--RLAPAADKLLELLSDSQSASPPPILFHSFS 75 (240)
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeec---c--chHHHHHHHHHHhhhhccCCCCCEEEEEEE
Confidence 56666666666666667777777779999999877632211111 0 1123344455555554333 389999999
Q ss_pred hhHHHHHHHHHh-----------CCCccEEEEeCCccCHHH--HHHHHHHHHhhhCCchh------HHH-HHHHHHHHHh
Q 013268 145 MGAVTSLLYGAE-----------DPSIAGMVLDSAFSDLFD--LMLELVDVYKIRLPKFT------VKM-AVQYMRRVIQ 204 (446)
Q Consensus 145 ~GG~ial~~a~~-----------~p~v~~lVl~sp~~~~~~--~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~ 204 (446)
.||...+..... .|.++|+|+.|.+..... ....+... .+... ... ....+.....
T Consensus 76 nGG~~~~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (240)
T PF05705_consen 76 NGGSFLYSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTYSSSARAFSAA----LPKSSPRWFVPLWPLLQFLLRLSII 151 (240)
T ss_pred CchHHHHHHHHHHHHhcccccccccccceeEEeCCCCccccccHHHHHHHH----cCccchhhHHHHHHHHHHHHHHHHH
Confidence 988777655441 123899999987754322 11111111 12110 001 1111111000
Q ss_pred hh--hcccccc---cchh--hhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcC---CCcEEEEeCC-CCCCC---ChhH
Q 013268 205 KK--AKFDIMD---LNCL--KLAPKTFIPALFGHASEDKFIRARHSDLIFNAYA---GDKNIIKFDG-DHNSS---RPQF 270 (446)
Q Consensus 205 ~~--~~~~~~~---~~~~--~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~---~~~~~~~~~g-gH~~~---~~~~ 270 (446)
.. ....... .... .......+|-|+++++.|.+++.+..++..+... .++....+++ .|... +|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~ 231 (240)
T PF05705_consen 152 SYFIFGYPDVQEYYRRALNDFANSPSRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDR 231 (240)
T ss_pred HHHHhcCCcHHHHHHHHHhhhhcCCCCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHH
Confidence 00 0000000 0001 1122456899999999999999998888876654 2455666676 77755 8999
Q ss_pred HHHHHHHHH
Q 013268 271 YYDSVSIFF 279 (446)
Q Consensus 271 ~~~~i~~Fl 279 (446)
+.+.+.+|+
T Consensus 232 Y~~~v~~fw 240 (240)
T PF05705_consen 232 YWRAVDEFW 240 (240)
T ss_pred HHHHHHhhC
Confidence 999998874
No 157
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.31 E-value=2.1e-05 Score=76.87 Aligned_cols=106 Identities=20% Similarity=0.269 Sum_probs=72.4
Q ss_pred CCCcEEEEECCCCCChhhH-------HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCC
Q 013268 64 TPLPCVVYCHGNSGCRADA-------NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTS 136 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~-------~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~ 136 (446)
+..|+||++||+|-..... ..+...| + ...++++||.-...-.. ...+. ....++.+..++|.+..+..
T Consensus 120 k~DpVlIYlHGGGY~l~~~p~qi~~L~~i~~~l-~-~~SILvLDYsLt~~~~~-~~~yP-tQL~qlv~~Y~~Lv~~~G~~ 195 (374)
T PF10340_consen 120 KSDPVLIYLHGGGYFLGTTPSQIEFLLNIYKLL-P-EVSILVLDYSLTSSDEH-GHKYP-TQLRQLVATYDYLVESEGNK 195 (374)
T ss_pred CCCcEEEEEcCCeeEecCCHHHHHHHHHHHHHc-C-CCeEEEEeccccccccC-CCcCc-hHHHHHHHHHHHHHhccCCC
Confidence 3569999999998432221 1222233 3 46899999985430001 11111 33788899999999666789
Q ss_pred cEEEEEechhHHHHHHHHHh----CC--CccEEEEeCCccCHH
Q 013268 137 RIGLWGRSMGAVTSLLYGAE----DP--SIAGMVLDSAFSDLF 173 (446)
Q Consensus 137 ~i~lvG~S~GG~ial~~a~~----~p--~v~~lVl~sp~~~~~ 173 (446)
+|.|+|-|.||.+++.++.. ++ -.+.+|+++|+..+.
T Consensus 196 nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 196 NIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred eEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 99999999999999877653 11 169999999998764
No 158
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.30 E-value=1.5e-05 Score=72.06 Aligned_cols=86 Identities=16% Similarity=0.066 Sum_probs=59.7
Q ss_pred CChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHH-HHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 77 GCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDD-LKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 77 ~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D-~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
++...|..+...+.. ++.|++++++|++.+..... . .++ +...++.+.......++.++|||+||.++..++.
T Consensus 10 ~~~~~~~~~~~~l~~-~~~v~~~~~~g~~~~~~~~~--~---~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~ 83 (212)
T smart00824 10 SGPHEYARLAAALRG-RRDVSALPLPGFGPGEPLPA--S---ADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAA 83 (212)
T ss_pred CcHHHHHHHHHhcCC-CccEEEecCCCCCCCCCCCC--C---HHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHH
Confidence 566678888888876 58999999999986543221 1 222 2234444544444578999999999999988887
Q ss_pred hC---CC-ccEEEEeCC
Q 013268 156 ED---PS-IAGMVLDSA 168 (446)
Q Consensus 156 ~~---p~-v~~lVl~sp 168 (446)
.. +. +.+++++.+
T Consensus 84 ~l~~~~~~~~~l~~~~~ 100 (212)
T smart00824 84 RLEARGIPPAAVVLLDT 100 (212)
T ss_pred HHHhCCCCCcEEEEEcc
Confidence 62 23 788877654
No 159
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.30 E-value=1.5e-05 Score=74.11 Aligned_cols=110 Identities=18% Similarity=0.202 Sum_probs=74.4
Q ss_pred CCCCcEEEEECCCCCChhhH-HHHHHHhccCCc--EEEEeCCCCCCCCCCCCcCC--CcchHHHHHHHHHHHHhcCCCCc
Q 013268 63 DTPLPCVVYCHGNSGCRADA-NEAAVILLPSNI--TLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSR 137 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~-~~~~~~L~~~Gy--~Vi~~D~~G~G~S~~~~~~~--~~~~~~D~~~~i~~l~~~~~~~~ 137 (446)
...+.++||+||+..+.... ...++.....++ .++.+.+|+.|.-.+-.... ......++..+++.|.+..+..+
T Consensus 15 ~~~~~vlvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~ 94 (233)
T PF05990_consen 15 SPDKEVLVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKR 94 (233)
T ss_pred CCCCeEEEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCce
Confidence 35678999999999875543 233332222223 79999999877532211111 11125667778888877767799
Q ss_pred EEEEEechhHHHHHHHHHh----C--C----CccEEEEeCCccCH
Q 013268 138 IGLWGRSMGAVTSLLYGAE----D--P----SIAGMVLDSAFSDL 172 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~----~--p----~v~~lVl~sp~~~~ 172 (446)
|+|++||||+.+.+.+... . | .+..+|+.+|-.+.
T Consensus 95 I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~ 139 (233)
T PF05990_consen 95 IHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDN 139 (233)
T ss_pred EEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCH
Confidence 9999999999999887654 2 1 27788998887765
No 160
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.28 E-value=1.4e-05 Score=81.76 Aligned_cols=127 Identities=15% Similarity=0.208 Sum_probs=87.0
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHH------------------HhccCCcEEEEeCCC-CCCC
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV------------------ILLPSNITLFTLDFS-GSGL 106 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~------------------~L~~~Gy~Vi~~D~~-G~G~ 106 (446)
.+..+.++.|.... .....|+||+++|++|.+..+..+.+ .|.+ -.+++.+|.| |+|.
T Consensus 59 ~~~~lFyw~~~s~~--~~~~~Pl~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~-~~~~l~iDqP~G~G~ 135 (462)
T PTZ00472 59 TDKHYFYWAFGPRN--GNPEAPVLLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNN-EAYVIYVDQPAGVGF 135 (462)
T ss_pred CCceEEEEEEEcCC--CCCCCCEEEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCccccc-ccCeEEEeCCCCcCc
Confidence 36778888887653 34578999999999988765422211 1222 3678999975 8888
Q ss_pred CCCCCcCCC---cchHHHHHHHHHHHHhcCC---CCcEEEEEechhHHHHHHHHHhC---------CC--ccEEEEeCCc
Q 013268 107 SDGDYVSLG---WHEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAED---------PS--IAGMVLDSAF 169 (446)
Q Consensus 107 S~~~~~~~~---~~~~~D~~~~i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~~---------p~--v~~lVl~sp~ 169 (446)
|........ ...++|+..+++.+.++.. ..+++|+|+|+||..+..+|..- .. ++|+++..|+
T Consensus 136 S~~~~~~~~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~ 215 (462)
T PTZ00472 136 SYADKADYDHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGL 215 (462)
T ss_pred ccCCCCCCCCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccc
Confidence 875432221 1236777777776554433 38999999999999887777651 12 8999999998
Q ss_pred cCHHHH
Q 013268 170 SDLFDL 175 (446)
Q Consensus 170 ~~~~~~ 175 (446)
.+....
T Consensus 216 ~dp~~q 221 (462)
T PTZ00472 216 TDPYTQ 221 (462)
T ss_pred cChhhh
Confidence 876543
No 161
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=98.25 E-value=2.4e-06 Score=89.51 Aligned_cols=119 Identities=20% Similarity=0.314 Sum_probs=75.3
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCC---CCh-hhHHHHHHHhccCCcEEEEeCCC----CCCCCCCCCcCCCcchHHH
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCR-ADANEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKDD 121 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g---~~~-~~~~~~~~~L~~~Gy~Vi~~D~~----G~G~S~~~~~~~~~~~~~D 121 (446)
|+..+|.|.......+.|++|++||++ |+. .........++.+++.|++++|| |+-.+.......+..-..|
T Consensus 109 L~LnI~~P~~~~~~~~lPV~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~D 188 (535)
T PF00135_consen 109 LYLNIYTPSNASSNSKLPVMVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLD 188 (535)
T ss_dssp -EEEEEEETSSSSTTSEEEEEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHH
T ss_pred HHHhhhhccccccccccceEEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhh
Confidence 566689998654444689999999997 333 12222334556779999999999 3322221111112223789
Q ss_pred HHHHHHHHHhcCCC-----CcEEEEEechhHHHHHHHHHhCC--C-ccEEEEeCC
Q 013268 122 LKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSA 168 (446)
Q Consensus 122 ~~~~i~~l~~~~~~-----~~i~lvG~S~GG~ial~~a~~~p--~-v~~lVl~sp 168 (446)
...+++|++++... ++|.|+|+|.||..+...+.... . +.++|+.|+
T Consensus 189 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SG 243 (535)
T PF00135_consen 189 QRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES-
T ss_pred hHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeecccccccccccccccc
Confidence 99999999987532 79999999999988877666522 2 899999887
No 162
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.24 E-value=5e-06 Score=83.78 Aligned_cols=160 Identities=18% Similarity=0.156 Sum_probs=101.3
Q ss_pred CCcEEEEECCCC--CC-hhhHHHHHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCc-chHHHHHHHHHHH----HhcCC
Q 013268 65 PLPCVVYCHGNS--GC-RADANEAAVILLP--SNITLFTLDFSGSGLSDGDYVSLGW-HEKDDLKVVVSYL----RGNKQ 134 (446)
Q Consensus 65 ~~p~VVllHG~g--~~-~~~~~~~~~~L~~--~Gy~Vi~~D~~G~G~S~~~~~~~~~-~~~~D~~~~i~~l----~~~~~ 134 (446)
..|.+|++||.+ .. ...+..+-..|.- +-..|-++|++.- .++ ... +.++.+..+..+. ...+.
T Consensus 175 ~spl~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~--igG----~nI~h~ae~~vSf~r~kvlei~gefp 248 (784)
T KOG3253|consen 175 ASPLAIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNP--IGG----ANIKHAAEYSVSFDRYKVLEITGEFP 248 (784)
T ss_pred CCceEEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCC--CCC----cchHHHHHHHHHHhhhhhhhhhccCC
Confidence 468999999998 11 1222222223322 2345677777621 111 111 1133333333322 22334
Q ss_pred CCcEEEEEechhHHHHHHHHHhCCC--ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhccccc
Q 013268 135 TSRIGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIM 212 (446)
Q Consensus 135 ~~~i~lvG~S~GG~ial~~a~~~p~--v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (446)
..+|+|+|.|||+.++..+...+.+ |+++|+++-..+..+- +. .
T Consensus 249 ha~IiLvGrsmGAlVachVSpsnsdv~V~~vVCigypl~~vdg------------pr--------------------g-- 294 (784)
T KOG3253|consen 249 HAPIILVGRSMGALVACHVSPSNSDVEVDAVVCIGYPLDTVDG------------PR--------------------G-- 294 (784)
T ss_pred CCceEEEecccCceeeEEeccccCCceEEEEEEecccccCCCc------------cc--------------------C--
Confidence 4789999999999988888877665 8999987754431110 00 0
Q ss_pred ccchhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC
Q 013268 213 DLNCLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS 266 (446)
Q Consensus 213 ~~~~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~ 266 (446)
..-+.+-.++.|+||+.|.+|..++++..+++.+++....+++++++ +|.+-
T Consensus 295 --irDE~Lldmk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsma 347 (784)
T KOG3253|consen 295 --IRDEALLDMKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMA 347 (784)
T ss_pred --CcchhhHhcCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCcccc
Confidence 00022335668999999999999999999999999998888999998 99854
No 163
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=98.22 E-value=3.3e-06 Score=84.16 Aligned_cols=119 Identities=21% Similarity=0.300 Sum_probs=78.8
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCC---CChhhHHHHHHHhccCC-cEEEEeCCCC--CCCCC----C-CCcCCCcch
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNS---GCRADANEAAVILLPSN-ITLFTLDFSG--SGLSD----G-DYVSLGWHE 118 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g---~~~~~~~~~~~~L~~~G-y~Vi~~D~~G--~G~S~----~-~~~~~~~~~ 118 (446)
|+..+|.|.. ...+.|+||++||++ |+......--..|+++| +.|+.++||= .|.-. . .......--
T Consensus 80 L~LNIwaP~~--~a~~~PVmV~IHGG~y~~Gs~s~~~ydgs~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~G 157 (491)
T COG2272 80 LYLNIWAPEV--PAEKLPVMVYIHGGGYIMGSGSEPLYDGSALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLG 157 (491)
T ss_pred eeEEeeccCC--CCCCCcEEEEEeccccccCCCcccccChHHHHhcCCEEEEEeCcccccceeeehhhcccccccccccc
Confidence 4555888872 345689999999997 33332222345788887 9999999992 12111 1 000001112
Q ss_pred HHHHHHHHHHHHhcC-----CCCcEEEEEechhHHHHHHHHHhCCC----ccEEEEeCCccC
Q 013268 119 KDDLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSAFSD 171 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~-----~~~~i~lvG~S~GG~ial~~a~~~p~----v~~lVl~sp~~~ 171 (446)
..|...+++|++++. +.++|.|+|.|.||+.++.+.+. |. +..+|+.|+...
T Consensus 158 l~DqilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 158 LLDQILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 689999999999873 23789999999999988877655 44 666777776654
No 164
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.16 E-value=2.1e-06 Score=83.81 Aligned_cols=107 Identities=20% Similarity=0.217 Sum_probs=65.0
Q ss_pred CCCCcEEEEECCCCCCh--hhH-HHHHHHh-cc--CCcEEEEeCCCCCCCCCCCCcCCC---cchHHHHHHHHHHHHhcC
Q 013268 63 DTPLPCVVYCHGNSGCR--ADA-NEAAVIL-LP--SNITLFTLDFSGSGLSDGDYVSLG---WHEKDDLKVVVSYLRGNK 133 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~--~~~-~~~~~~L-~~--~Gy~Vi~~D~~G~G~S~~~~~~~~---~~~~~D~~~~i~~l~~~~ 133 (446)
+..+|++|++||+.++. ..| ..+...+ .. .+++||++|+...-. ....... ......+...+..|.+..
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~--~~Y~~a~~n~~~vg~~la~~l~~L~~~~ 145 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGAS--NNYPQAVANTRLVGRQLAKFLSFLINNF 145 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHS--S-HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhcc--ccccchhhhHHHHHHHHHHHHHHHHhhc
Confidence 35789999999999776 334 3455544 44 489999999963211 1100000 001334556667776443
Q ss_pred C--CCcEEEEEechhHHHHHHHHHhCCC---ccEEEEeCCccC
Q 013268 134 Q--TSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLDSAFSD 171 (446)
Q Consensus 134 ~--~~~i~lvG~S~GG~ial~~a~~~p~---v~~lVl~sp~~~ 171 (446)
+ .++|+|+|||+||.+|-.++..... |..|+.+.|...
T Consensus 146 g~~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 146 GVPPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp ---GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred CCChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 4 3899999999999999999887554 888888887754
No 165
>COG3150 Predicted esterase [General function prediction only]
Probab=98.10 E-value=0.00011 Score=62.66 Aligned_cols=182 Identities=12% Similarity=0.079 Sum_probs=97.5
Q ss_pred EEEECCCCCChhhHHHH--HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechh
Q 013268 69 VVYCHGNSGCRADANEA--AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (446)
Q Consensus 69 VVllHG~g~~~~~~~~~--~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~G 146 (446)
||++||+.++..+.... .+++... ..- .+.+..... .....+.+-++.+....+.....|+|-|+|
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~-~~~-------i~y~~p~l~----h~p~~a~~ele~~i~~~~~~~p~ivGssLG 69 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDED-VRD-------IEYSTPHLP----HDPQQALKELEKAVQELGDESPLIVGSSLG 69 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhcc-ccc-------eeeecCCCC----CCHHHHHHHHHHHHHHcCCCCceEEeecch
Confidence 89999999876665432 2333332 222 222221111 113444555555555445566899999999
Q ss_pred HHHHHHHHHhCCCccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccccccchhhhCCCCCCc
Q 013268 147 AVTSLLYGAEDPSIAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDIMDLNCLKLAPKTFIP 226 (446)
Q Consensus 147 G~ial~~a~~~p~v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P 226 (446)
|+.|.+++.... +++++ ++|.....+.+...+..-......-....-..-+ .+ -....+..++.|
T Consensus 70 GY~At~l~~~~G-irav~-~NPav~P~e~l~gylg~~en~ytg~~y~le~~hI------------~~-l~~~~~~~l~~p 134 (191)
T COG3150 70 GYYATWLGFLCG-IRAVV-FNPAVRPYELLTGYLGRPENPYTGQEYVLESRHI------------AT-LCVLQFRELNRP 134 (191)
T ss_pred HHHHHHHHHHhC-Chhhh-cCCCcCchhhhhhhcCCCCCCCCcceEEeehhhH------------HH-HHHhhccccCCC
Confidence 999999998876 55554 5666665555444332111000000000000000 00 011223333344
Q ss_pred -EEEEEeCC-CCCCChHHHHHHHHHcCCCcEEEEeCCCCCCCChhHHHHHHHHHHH
Q 013268 227 -ALFGHASE-DKFIRARHSDLIFNAYAGDKNIIKFDGDHNSSRPQFYYDSVSIFFY 280 (446)
Q Consensus 227 -vLii~G~~-D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~~~~~~~~~i~~Fl~ 280 (446)
.+++.... |.+.+...+...+.. ..+.++-+|+|-+..-+.+.+.|..|..
T Consensus 135 ~~~~lL~qtgDEvLDyr~a~a~y~~---~~~~V~dgg~H~F~~f~~~l~~i~aF~g 187 (191)
T COG3150 135 RCLVLLSQTGDEVLDYRQAVAYYHP---CYEIVWDGGDHKFKGFSRHLQRIKAFKG 187 (191)
T ss_pred cEEEeecccccHHHHHHHHHHHhhh---hhheeecCCCccccchHHhHHHHHHHhc
Confidence 45555555 998877766665543 3344444458998888888899988864
No 166
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.07 E-value=2.2e-05 Score=73.48 Aligned_cols=100 Identities=20% Similarity=0.223 Sum_probs=77.1
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechh
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~G 146 (446)
|++.++||.+|....|..++..|... ..|+.++.||.|.-.... ... -+.+...++.+++.-+.+++.|.|+|+|
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-~~v~~l~a~g~~~~~~~~--~~l--~~~a~~yv~~Ir~~QP~GPy~L~G~S~G 75 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-LPVYGLQAPGYGAGEQPF--ASL--DDMAAAYVAAIRRVQPEGPYVLLGWSLG 75 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-ceeeccccCccccccccc--CCH--HHHHHHHHHHHHHhCCCCCEEEEeeccc
Confidence 57899999999999999999999876 999999999998532211 111 2344556677777666689999999999
Q ss_pred HHHHHHHHHhC---C-CccEEEEeCCccC
Q 013268 147 AVTSLLYGAED---P-SIAGMVLDSAFSD 171 (446)
Q Consensus 147 G~ial~~a~~~---p-~v~~lVl~sp~~~ 171 (446)
|.+|..+|.+- . .|..++++.+...
T Consensus 76 G~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 76 GAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred cHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 99999998862 2 2888888766655
No 167
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.04 E-value=3.6e-05 Score=70.33 Aligned_cols=217 Identities=14% Similarity=0.126 Sum_probs=114.8
Q ss_pred CCCcEEEEECCCCCChhhHH-HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCc-chHHHH----HHHHHHHHh------
Q 013268 64 TPLPCVVYCHGNSGCRADAN-EAAVILLPSNITLFTLDFSGSGLSDGDYVSLGW-HEKDDL----KVVVSYLRG------ 131 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~-~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~-~~~~D~----~~~i~~l~~------ 131 (446)
+..++.|.+-|-|.+...-. .+...+.++|...+.+.-|-+|.......-... ..+.|+ ++.|+...+
T Consensus 111 K~~~KOG~~a~tgdh~y~rr~~L~~p~~k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~ 190 (371)
T KOG1551|consen 111 KMADLCLSWALTGDHVYTRRLVLSKPINKREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSS 190 (371)
T ss_pred CcCCeeEEEeecCCceeEeeeeecCchhhhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhccccc
Confidence 45577777776665433222 345567778899999999988876532110000 001221 122333322
Q ss_pred cCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHH----HHH---HHHHH---------HhhhCCchhHHH
Q 013268 132 NKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFD----LML---ELVDV---------YKIRLPKFTVKM 194 (446)
Q Consensus 132 ~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~----~~~---~~~~~---------~~~~~~~~~~~~ 194 (446)
..+.+++.|+|.||||.+|..+...++. |.-+=+.++-..... .+. ..+.. +..+.|.-....
T Consensus 191 ~~g~g~~~~~g~Smgg~~a~~vgS~~q~Pva~~p~l~~~~asvs~teg~l~~~~s~~~~~~~~t~~~~~~~r~p~Q~~~~ 270 (371)
T KOG1551|consen 191 ADGLGNLNLVGRSMGGDIANQVGSLHQKPVATAPCLNSSKASVSATEGLLLQDTSKMKRFNQTTNKSGYTSRNPAQSYHL 270 (371)
T ss_pred ccCcccceeeeeecccHHHHhhcccCCCCccccccccccccchhhhhhhhhhhhHHHHhhccCcchhhhhhhCchhhHHH
Confidence 2345899999999999999999998776 333322222111100 000 00000 111112111100
Q ss_pred HHHHHHHHHhhhhcccccc--cchhhhCCCCCCc-----EEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCCCCCCC-
Q 013268 195 AVQYMRRVIQKKAKFDIMD--LNCLKLAPKTFIP-----ALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDGDHNSS- 266 (446)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~--~~~~~~l~~i~~P-----vLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~ggH~~~- 266 (446)
......+.- .......+. .+-...+....+| +.++.+++|..+|......+.+..++ .++.+.+|||...
T Consensus 271 ~~~~~srn~-~~E~~~~Mr~vmd~~T~v~~fp~Pvdpsl~ivv~A~~D~Yipr~gv~~lQ~~WPg-~eVr~~egGHVsay 348 (371)
T KOG1551|consen 271 LSKEQSRNS-RKESLIFMRGVMDECTHVANFPVPVDPSLIIVVQAKEDAYIPRTGVRSLQEIWPG-CEVRYLEGGHVSAY 348 (371)
T ss_pred HHHHhhhcc-hHHHHHHHHHHHHhhchhhcCCCCCCCCeEEEEEecCCccccccCcHHHHHhCCC-CEEEEeecCceeee
Confidence 000000000 000000000 0111222333333 57889999999999888888888874 6788888999855
Q ss_pred --ChhHHHHHHHHHHHhh
Q 013268 267 --RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 267 --~~~~~~~~i~~Fl~~~ 282 (446)
..+.+...|.+-|++.
T Consensus 349 l~k~dlfRR~I~d~L~R~ 366 (371)
T KOG1551|consen 349 LFKQDLFRRAIVDGLDRL 366 (371)
T ss_pred ehhchHHHHHHHHHHHhh
Confidence 6678888888887765
No 168
>COG0627 Predicted esterase [General function prediction only]
Probab=98.04 E-value=3.1e-05 Score=74.87 Aligned_cols=215 Identities=13% Similarity=0.041 Sum_probs=112.6
Q ss_pred CCCCcEEEEECCCCCChhhHH---HHHHHhccCCcEEEEeCCC--------------CCCCCC-----CCCcCCCcchHH
Q 013268 63 DTPLPCVVYCHGNSGCRADAN---EAAVILLPSNITLFTLDFS--------------GSGLSD-----GDYVSLGWHEKD 120 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~~---~~~~~L~~~Gy~Vi~~D~~--------------G~G~S~-----~~~~~~~~~~~~ 120 (446)
+++.|+++++||..++...+. .+-......|+.++++|-. |-+.|- ..+........+
T Consensus 51 ~~~ipV~~~l~G~t~~~~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~p~G~~~sfY~d~~~~~~~~~~~q~~ 130 (316)
T COG0627 51 GRDIPVLYLLSGLTCNEPNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVMPLGGGASFYSDWTQPPWASGPYQWE 130 (316)
T ss_pred CCCCCEEEEeCCCCCCCCceEeccchhhhhhhcCeEEecCCCCcccCCCCccccccCCCccceecccccCccccCccchh
Confidence 467899999999998753332 2334445567888887433 222111 000000000011
Q ss_pred H--HHHHHHHHHhcCCC----CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHHHHHHHHhhhCCchhHH
Q 013268 121 D--LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLMLELVDVYKIRLPKFTVK 193 (446)
Q Consensus 121 D--~~~~i~~l~~~~~~----~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (446)
+ +.++-..+.+.... ++..|+||||||.-|+.+|+++|+ ++.+...+|..+........... ..+
T Consensus 131 tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s~~~~~~~~~---~~~----- 202 (316)
T COG0627 131 TFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPSSPWGPTLAM---GDP----- 202 (316)
T ss_pred HHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcchhceeccccccccccccccccccc---ccc-----
Confidence 1 11222233333232 278999999999999999999988 88888888877654211111000 000
Q ss_pred HHHHHHHHHHhhhhcccccccchhhhCCC--------------CCCcEEEEEeCCCCCCC-h-HHHHHHHHHcC---CCc
Q 013268 194 MAVQYMRRVIQKKAKFDIMDLNCLKLAPK--------------TFIPALFGHASEDKFIR-A-RHSDLIFNAYA---GDK 254 (446)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--------------i~~PvLii~G~~D~~vp-~-~~~~~l~~~l~---~~~ 254 (446)
+.......++.........+.++...+.+ ...++++-+|..|.+.. . ...+.+.+++. .+.
T Consensus 203 ~g~~~~~~~~G~~~~~~w~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~d~g~ad~~~~~~~~~~~~~~~a~~~~g~~~ 282 (316)
T COG0627 203 WGGKAFNAMLGPDSDPAWQENDPLSLIEKLVANANTRIWVYGGSPPELLIDNGPADFFLAANNLSTRAFAEALRAAGIPN 282 (316)
T ss_pred ccCccHHHhcCCCccccccccCchhHHHHhhhcccccceecccCCCccccccccchhhhhhcccCHHHHHHHHHhcCCCc
Confidence 00000000111111111111111111111 34577888999998875 2 22444555443 455
Q ss_pred EEEEeC-CCCCCCChhHHHHHHHHHHHhhcCC
Q 013268 255 NIIKFD-GDHNSSRPQFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 255 ~~~~~~-ggH~~~~~~~~~~~i~~Fl~~~L~~ 285 (446)
.+...+ |+|....-....+....|+.+.|..
T Consensus 283 ~~~~~~~G~Hsw~~w~~~l~~~~~~~a~~l~~ 314 (316)
T COG0627 283 GVRDQPGGDHSWYFWASQLADHLPWLAGALGL 314 (316)
T ss_pred eeeeCCCCCcCHHHHHHHHHHHHHHHHHHhcc
Confidence 666664 4898776667778888888887764
No 169
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.99 E-value=0.00088 Score=59.95 Aligned_cols=108 Identities=18% Similarity=0.143 Sum_probs=75.7
Q ss_pred CCCcEEEEECCCCCCh---hhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEE
Q 013268 64 TPLPCVVYCHGNSGCR---ADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGL 140 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~---~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~l 140 (446)
..+-.|||+.|++... .....+...|.+.+|.++-+-++.+-.--|.... ..+.+|+..+++++........|++
T Consensus 34 v~~~~vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~sl--k~D~edl~~l~~Hi~~~~fSt~vVL 111 (299)
T KOG4840|consen 34 VESVKVVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSL--KDDVEDLKCLLEHIQLCGFSTDVVL 111 (299)
T ss_pred ceEEEEEEEcccCCCccccccHHHHHHHHhhccceeeeeeccccccccccccc--cccHHHHHHHHHHhhccCcccceEE
Confidence 3446789999998542 2345677888889999999887743211111111 1347899999998865533469999
Q ss_pred EEechhHHHHHHHHHhC--CC-ccEEEEeCCccCHH
Q 013268 141 WGRSMGAVTSLLYGAED--PS-IAGMVLDSAFSDLF 173 (446)
Q Consensus 141 vG~S~GG~ial~~a~~~--p~-v~~lVl~sp~~~~~ 173 (446)
+|||-|+.=.+.+.... ++ +++.|+.+|..+..
T Consensus 112 ~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 112 VGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred EecCccchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999999988888442 33 88888888877643
No 170
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=97.92 E-value=0.0002 Score=67.47 Aligned_cols=123 Identities=15% Similarity=0.141 Sum_probs=75.6
Q ss_pred cEEEEEEEecCCCCCCCCCcEEEEECCCCCCh-hhHHHHHHHhccC----CcEEEEeCCCCCCCCCCCCcCCCcchHH-H
Q 013268 48 HVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCR-ADANEAAVILLPS----NITLFTLDFSGSGLSDGDYVSLGWHEKD-D 121 (446)
Q Consensus 48 ~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~-~~~~~~~~~L~~~----Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~-D 121 (446)
.+....+|.|.+.....+.|++++.||-.... .....+.+.|... .-.++.+|+--.-.-..... ......+ -
T Consensus 80 ~~~~~vv~lppgy~~~~k~pvl~~~DG~~~~~~g~i~~~~dsli~~g~i~pai~vgid~~d~~~R~~~~~-~n~~~~~~L 158 (299)
T COG2382 80 SERRRVVYLPPGYNPLEKYPVLYLQDGQDWFRSGRIPRILDSLIAAGEIPPAILVGIDYIDVKKRREELH-CNEAYWRFL 158 (299)
T ss_pred cceeEEEEeCCCCCccccccEEEEeccHHHHhcCChHHHHHHHHHcCCCCCceEEecCCCCHHHHHHHhc-ccHHHHHHH
Confidence 45555578888776778899999999874211 1112233344333 35677777752100000000 1000112 2
Q ss_pred HHHHHHHHHhcCCC----CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 122 LKVVVSYLRGNKQT----SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 122 ~~~~i~~l~~~~~~----~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
..+++-++++.+.. +.-+|+|.|+||.+++..+..+|+ +..++..||...
T Consensus 159 ~~eLlP~v~~~yp~~~~a~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 159 AQELLPYVEERYPTSADADGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred HHHhhhhhhccCcccccCCCcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 34556677777654 456899999999999999999999 888888777653
No 171
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.88 E-value=0.00025 Score=68.24 Aligned_cols=113 Identities=19% Similarity=0.182 Sum_probs=78.2
Q ss_pred CCCcEEEEECCCCCChhh-HHHHHHHhccCC--cEEEEeCCCCCCCCCCCCcCC--CcchHHHHHHHHHHHHhcCCCCcE
Q 013268 64 TPLPCVVYCHGNSGCRAD-ANEAAVILLPSN--ITLFTLDFSGSGLSDGDYVSL--GWHEKDDLKVVVSYLRGNKQTSRI 138 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~-~~~~~~~L~~~G--y~Vi~~D~~G~G~S~~~~~~~--~~~~~~D~~~~i~~l~~~~~~~~i 138 (446)
..+.++||+||+.-+-.. -.+.++.....| ...+.+-+|..|.--+-..+. ..+...+++.++.+|.+.....+|
T Consensus 114 ~~k~vlvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I 193 (377)
T COG4782 114 SAKTVLVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRI 193 (377)
T ss_pred CCCeEEEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceE
Confidence 467899999999865433 344555554444 567888998665432111111 112367899999999999888999
Q ss_pred EEEEechhHHHHHHHHHh----CC-----CccEEEEeCCccCHHHHH
Q 013268 139 GLWGRSMGAVTSLLYGAE----DP-----SIAGMVLDSAFSDLFDLM 176 (446)
Q Consensus 139 ~lvG~S~GG~ial~~a~~----~p-----~v~~lVl~sp~~~~~~~~ 176 (446)
+|++||||.++++.+..+ .. .++-+|+.+|-.+..-..
T Consensus 194 ~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DVF~ 240 (377)
T COG4782 194 YLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDVFS 240 (377)
T ss_pred EEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhhHH
Confidence 999999999999877654 11 278899988877754433
No 172
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.82 E-value=0.0017 Score=65.38 Aligned_cols=74 Identities=16% Similarity=0.273 Sum_probs=47.1
Q ss_pred HHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH----HHHHHHhcCC-CCcEEEEEechhHHHHHHHHHhCCC
Q 013268 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV----VVSYLRGNKQ-TSRIGLWGRSMGAVTSLLYGAEDPS 159 (446)
Q Consensus 85 ~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~----~i~~l~~~~~-~~~i~lvG~S~GG~ial~~a~~~p~ 159 (446)
+...| ..|+.|+.+.+.- ...+ -+.++|+.. .++.+..... ..+..|+|.|.||..++.+|+.+|+
T Consensus 93 vG~AL-~~GHPvYFV~F~p----~P~p----gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd 163 (581)
T PF11339_consen 93 VGVAL-RAGHPVYFVGFFP----EPEP----GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPD 163 (581)
T ss_pred HHHHH-HcCCCeEEEEecC----CCCC----CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcC
Confidence 33344 4488888877751 1111 123555544 3444444333 3589999999999999999999999
Q ss_pred -ccEEEEeC
Q 013268 160 -IAGMVLDS 167 (446)
Q Consensus 160 -v~~lVl~s 167 (446)
+.-+|+.+
T Consensus 164 ~~gplvlaG 172 (581)
T PF11339_consen 164 LVGPLVLAG 172 (581)
T ss_pred ccCceeecC
Confidence 55555543
No 173
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=97.81 E-value=6e-05 Score=69.42 Aligned_cols=89 Identities=17% Similarity=0.134 Sum_probs=48.1
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcC---CC--C
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---QT--S 136 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~--~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~---~~--~ 136 (446)
++.-+||++||+.|+..+|..+...+.. ..+.-..+.+.++...... ...+.. .-...+++++.+.. .. .
T Consensus 2 ~~~hLvV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~-T~~gI~--~~g~rL~~eI~~~~~~~~~~~~ 78 (217)
T PF05057_consen 2 KPVHLVVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFK-TFDGID--VCGERLAEEILEHIKDYESKIR 78 (217)
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccc-cchhhH--HHHHHHHHHHHHhccccccccc
Confidence 3567899999999999998877666655 1221112222222111111 011111 11222333333321 22 5
Q ss_pred cEEEEEechhHHHHHHHHH
Q 013268 137 RIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 137 ~i~lvG~S~GG~ial~~a~ 155 (446)
+|.++||||||.++-.+..
T Consensus 79 ~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 79 KISFIGHSLGGLIARYALG 97 (217)
T ss_pred cceEEEecccHHHHHHHHH
Confidence 8999999999999866554
No 174
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.73 E-value=0.00032 Score=71.71 Aligned_cols=108 Identities=19% Similarity=0.136 Sum_probs=68.5
Q ss_pred CCcEEEEECCCCCChhhH--HHHHHHhccC-CcEEEEeCCCCCCCCCCCCc--C--C---C-cchHHHHHHHHHHHHhcC
Q 013268 65 PLPCVVYCHGNSGCRADA--NEAAVILLPS-NITLFTLDFSGSGLSDGDYV--S--L---G-WHEKDDLKVVVSYLRGNK 133 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~--~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~--~--~---~-~~~~~D~~~~i~~l~~~~ 133 (446)
+.|++|++-|-+.-...+ ..+...|+++ |-.|+++++|-+|.|..... . . . .+.++|+...+++++.+.
T Consensus 28 ~gpifl~~ggE~~~~~~~~~~~~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~ 107 (434)
T PF05577_consen 28 GGPIFLYIGGEGPIEPFWINNGFMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKY 107 (434)
T ss_dssp TSEEEEEE--SS-HHHHHHH-HHHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCCccchhhhcCChHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhh
Confidence 378888886665322222 2234445444 78999999999999973211 1 1 1 123889999999998664
Q ss_pred C---CCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCH
Q 013268 134 Q---TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDL 172 (446)
Q Consensus 134 ~---~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~ 172 (446)
. ..|++++|-|+||++|..+-.++|+ |.|.+..+++...
T Consensus 108 ~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv~a 150 (434)
T PF05577_consen 108 NTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPVQA 150 (434)
T ss_dssp TTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--CCH
T ss_pred cCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEeccceeee
Confidence 3 2689999999999999999999999 8999988877643
No 175
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.71 E-value=0.001 Score=64.77 Aligned_cols=91 Identities=20% Similarity=0.170 Sum_probs=73.0
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
+....-||..|-||.+..-......|.++|+.|+-+|-.-+=.+.+.+.. ...|+..++++...+-+..++.|+|+
T Consensus 258 ~sd~~av~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe~----~a~Dl~r~i~~y~~~w~~~~~~liGy 333 (456)
T COG3946 258 NSDTVAVFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPEQ----IAADLSRLIRFYARRWGAKRVLLIGY 333 (456)
T ss_pred CcceEEEEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHHH----HHHHHHHHHHHHHHhhCcceEEEEee
Confidence 35567788999999888888899999999999999997766666655432 27899999999999888899999999
Q ss_pred chhHHHHHHHHHhCC
Q 013268 144 SMGAVTSLLYGAEDP 158 (446)
Q Consensus 144 S~GG~ial~~a~~~p 158 (446)
|+|+-+--.+-.+-|
T Consensus 334 SfGADvlP~~~n~L~ 348 (456)
T COG3946 334 SFGADVLPFAYNRLP 348 (456)
T ss_pred cccchhhHHHHHhCC
Confidence 999977655444443
No 176
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.61 E-value=0.00036 Score=63.25 Aligned_cols=76 Identities=18% Similarity=0.168 Sum_probs=49.8
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcE-EEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEec
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~-Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 144 (446)
..+||++.|+|.+...+..+. ...+|. ++++|||..-. |. + + ...++|.|+|+|
T Consensus 11 ~~LilfF~GWg~d~~~f~hL~---~~~~~D~l~~yDYr~l~~--------------d~----~-~---~~y~~i~lvAWS 65 (213)
T PF04301_consen 11 KELILFFAGWGMDPSPFSHLI---LPENYDVLICYDYRDLDF--------------DF----D-L---SGYREIYLVAWS 65 (213)
T ss_pred CeEEEEEecCCCChHHhhhcc---CCCCccEEEEecCccccc--------------cc----c-c---ccCceEEEEEEe
Confidence 579999999999877665442 123444 56789882210 11 1 1 134789999999
Q ss_pred hhHHHHHHHHHhCCCccEEEEeC
Q 013268 145 MGAVTSLLYGAEDPSIAGMVLDS 167 (446)
Q Consensus 145 ~GG~ial~~a~~~p~v~~lVl~s 167 (446)
||-.+|..+....| ++..|.++
T Consensus 66 mGVw~A~~~l~~~~-~~~aiAIN 87 (213)
T PF04301_consen 66 MGVWAANRVLQGIP-FKRAIAIN 87 (213)
T ss_pred HHHHHHHHHhccCC-cceeEEEE
Confidence 99999988766544 55555544
No 177
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.58 E-value=0.00023 Score=70.01 Aligned_cols=104 Identities=17% Similarity=0.127 Sum_probs=78.0
Q ss_pred CcEEEEECCCCCChhhHHHHHHHhccCCcE---EEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 013268 66 LPCVVYCHGNSGCRADANEAAVILLPSNIT---LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 66 ~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~---Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 142 (446)
.-+++++||++.....+..+...+...|+. +..+++++. ..... .....+.+...++.+....+..++.++|
T Consensus 59 ~~pivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~----~~~~~~ql~~~V~~~l~~~ga~~v~Lig 133 (336)
T COG1075 59 KEPIVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGG-DGTYS----LAVRGEQLFAYVDEVLAKTGAKKVNLIG 133 (336)
T ss_pred CceEEEEccCcCCcchhhhhhhhhcchHHHhccccccccccc-CCCcc----ccccHHHHHHHHHHHHhhcCCCceEEEe
Confidence 448999999988888888888788888888 899998865 11111 1112455556666665555668999999
Q ss_pred echhHHHHHHHHHhCC--C-ccEEEEeCCccCHHH
Q 013268 143 RSMGAVTSLLYGAEDP--S-IAGMVLDSAFSDLFD 174 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p--~-v~~lVl~sp~~~~~~ 174 (446)
|||||.++..++...+ . |+.++.++++.....
T Consensus 134 HS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~Gt~ 168 (336)
T COG1075 134 HSMGGLDSRYYLGVLGGANRVASVVTLGTPHHGTE 168 (336)
T ss_pred ecccchhhHHHHhhcCccceEEEEEEeccCCCCch
Confidence 9999999999999888 3 999999888765444
No 178
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.56 E-value=0.00085 Score=66.06 Aligned_cols=130 Identities=14% Similarity=0.092 Sum_probs=85.1
Q ss_pred EEEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhh--HHHHHHHhccC-CcEEEEeCCCCCCCCCCC-----
Q 013268 39 DLEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGD----- 110 (446)
Q Consensus 39 ~v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~--~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~----- 110 (446)
++++--.+..+|.+++.... .......|+++.|+|++... +....+.+|++ +..|+.++|=|.|.....
T Consensus 11 DvELgikR~sKLEyri~ydd---~Ke~kaIvfiI~GfG~dan~~~~d~~r~~iA~~fnvv~I~V~YHCf~~R~q~~A~~~ 87 (403)
T PF11144_consen 11 DVELGIKRESKLEYRISYDD---EKEIKAIVFIIPGFGADANSNYLDFMREYIAKKFNVVVISVNYHCFCNRPQYGAKFY 87 (403)
T ss_pred CeeecccccceeeEEeecCC---CCCceEEEEEeCCcCCCcchHHHHHHHHHHHHhCCEEEEEeeeeheeeccccCchhc
Confidence 45555567778888885543 44567788999999988663 34566677664 455566666665532210
Q ss_pred ----------------------CcC---------------------------------------------CCcchHHHHH
Q 013268 111 ----------------------YVS---------------------------------------------LGWHEKDDLK 123 (446)
Q Consensus 111 ----------------------~~~---------------------------------------------~~~~~~~D~~ 123 (446)
... +|.-.+-|..
T Consensus 88 ~~~~D~~iLk~~L~~i~i~~~~i~~~~~~~~~~~~L~~~I~~lK~~~~L~~d~kl~ls~tl~P~n~EYQN~GIMqAiD~I 167 (403)
T PF11144_consen 88 FDDIDKEILKKSLEKINIDSESINTYDNAEQIYELLNQNITELKEQGILPQDYKLNLSCTLIPPNGEYQNFGIMQAIDII 167 (403)
T ss_pred CCHHHHHHHHHHHHHcCccccccccchhHHHHHHHHHHHHHHHHhcCCCCCCcEEeEEEEecCCchhhhhhHHHHHHHHH
Confidence 000 0000133555
Q ss_pred HHHHHHHhcCCC--C--cEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 124 VVVSYLRGNKQT--S--RIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 124 ~~i~~l~~~~~~--~--~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
.++.++.+.... . +++++|+|.||++|..+|.-.|- +++++=-+++..
T Consensus 168 NAl~~l~k~~~~~~~~lp~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 168 NALLDLKKIFPKNGGGLPKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred HHHHHHHHhhhcccCCCcEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 666666665432 3 89999999999999999999998 888887666554
No 179
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=97.40 E-value=0.00075 Score=64.66 Aligned_cols=149 Identities=17% Similarity=0.214 Sum_probs=100.3
Q ss_pred CCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeC-CccCHHHHHHHHHHHHhhhCCchhHHHHHHHHHHHHhhhhcccc
Q 013268 133 KQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDS-AFSDLFDLMLELVDVYKIRLPKFTVKMAVQYMRRVIQKKAKFDI 211 (446)
Q Consensus 133 ~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~s-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (446)
..+..+.+.|-|--|..++.-|..+|++.++|... -..+....+..+...++..+|........+.+...+........
T Consensus 231 ~~Ik~F~VTGaSKRgWttwLTAIaDprv~aIvp~v~D~Lni~a~L~hiyrsYGgnwpi~l~pyyaegi~erl~tp~fkqL 310 (507)
T COG4287 231 VEIKGFMVTGASKRGWTTWLTAIADPRVFAIVPFVYDNLNIEAQLLHIYRSYGGNWPIKLAPYYAEGIDERLETPLFKQL 310 (507)
T ss_pred eeeeeEEEeccccchHHHHHHHhcCcchhhhhhhHHhhcccHHHHHHHHHhhCCCCCcccchhHhhhHHHhhcCHHHHHH
Confidence 34588999999999999999999999999888422 12345566666667666555543333333333332222222111
Q ss_pred cc-cchhhh-----CCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCCChhHHHHHHHHHHHhh
Q 013268 212 MD-LNCLKL-----APKTFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSSRPQFYYDSVSIFFYNV 282 (446)
Q Consensus 212 ~~-~~~~~~-----l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~~~~~~~~~i~~Fl~~~ 282 (446)
.+ .++... ..++.+|-+|+.|..|.++.+..+.-.++.+++.+.+.++|. .|...+ ..+.+.+..|+.+.
T Consensus 311 ~~IiDPlay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG~kaLrmvPN~~H~~~n-~~i~esl~~flnrf 387 (507)
T COG4287 311 LEIIDPLAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPGEKALRMVPNDPHNLIN-QFIKESLEPFLNRF 387 (507)
T ss_pred HHhhcHHHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCCceeeeeCCCCcchhhH-HHHHHHHHHHHHHH
Confidence 11 233333 367889999999999999999999999999999998999998 898763 23334444555443
No 180
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.37 E-value=0.0023 Score=64.80 Aligned_cols=131 Identities=16% Similarity=0.238 Sum_probs=80.8
Q ss_pred EEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHH-------------------HhccCCcEEEEeCC
Q 013268 41 EIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-------------------ILLPSNITLFTLDF 101 (446)
Q Consensus 41 ~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~-------------------~L~~~Gy~Vi~~D~ 101 (446)
.+....+..+.++.|.... .....|+||++.|++|++..+..+.+ .+.+ -.+++.+|.
T Consensus 17 ~~~~~~~~~lfyw~~~s~~--~~~~~Pl~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~-~an~l~iD~ 93 (415)
T PF00450_consen 17 PVNDNENAHLFYWFFESRN--DPEDDPLILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNK-FANLLFIDQ 93 (415)
T ss_dssp EECTTTTEEEEEEEEE-SS--GGCSS-EEEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGG-TSEEEEE--
T ss_pred ecCCCCCcEEEEEEEEeCC--CCCCccEEEEecCCceeccccccccccCceEEeeccccccccccccccc-ccceEEEee
Confidence 3434467889988886653 44678999999999998777644421 1222 368999996
Q ss_pred C-CCCCCCCCCcCC-Ccch---HHHHHHHHHHHHhcCC---CCcEEEEEechhHHHHHHHHHh----C-----CC--ccE
Q 013268 102 S-GSGLSDGDYVSL-GWHE---KDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----PS--IAG 162 (446)
Q Consensus 102 ~-G~G~S~~~~~~~-~~~~---~~D~~~~i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~----~-----p~--v~~ 162 (446)
| |.|.|....... .+.. ++|+..++..+..+.+ ..+++|+|-|+||..+-.+|.. . +. ++|
T Consensus 94 PvGtGfS~~~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkG 173 (415)
T PF00450_consen 94 PVGTGFSYGNDPSDYVWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKG 173 (415)
T ss_dssp STTSTT-EESSGGGGS-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEE
T ss_pred cCceEEeeccccccccchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhcccccccccccccc
Confidence 6 999987544432 2222 5555555544433333 2589999999999877666553 2 13 899
Q ss_pred EEEeCCccCHHH
Q 013268 163 MVLDSAFSDLFD 174 (446)
Q Consensus 163 lVl~sp~~~~~~ 174 (446)
+++.+|+.+...
T Consensus 174 i~IGng~~dp~~ 185 (415)
T PF00450_consen 174 IAIGNGWIDPRI 185 (415)
T ss_dssp EEEESE-SBHHH
T ss_pred ceecCccccccc
Confidence 999999887653
No 181
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.36 E-value=0.019 Score=52.94 Aligned_cols=99 Identities=15% Similarity=0.085 Sum_probs=64.6
Q ss_pred CCCcEEEEECCCC-C--ChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC--cchHHHHHHHHHHHHhcCCC---
Q 013268 64 TPLPCVVYCHGNS-G--CRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG--WHEKDDLKVVVSYLRGNKQT--- 135 (446)
Q Consensus 64 ~~~p~VVllHG~g-~--~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~--~~~~~D~~~~i~~l~~~~~~--- 135 (446)
++..+|-|+.|.. + ..-.|..+.+.|+++||.|++.=|.- | +.... ....+.+..+++.+.+..+.
T Consensus 15 ~P~gvihFiGGaf~ga~P~itYr~lLe~La~~Gy~ViAtPy~~-t-----fDH~~~A~~~~~~f~~~~~~L~~~~~~~~~ 88 (250)
T PF07082_consen 15 RPKGVIHFIGGAFVGAAPQITYRYLLERLADRGYAVIATPYVV-T-----FDHQAIAREVWERFERCLRALQKRGGLDPA 88 (250)
T ss_pred CCCEEEEEcCcceeccCcHHHHHHHHHHHHhCCcEEEEEecCC-C-----CcHHHHHHHHHHHHHHHHHHHHHhcCCCcc
Confidence 4666777777765 2 23457888999999999999988751 1 11110 01133445555666654332
Q ss_pred -CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCC
Q 013268 136 -SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSA 168 (446)
Q Consensus 136 -~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp 168 (446)
-+++-+|||||+-+-+.+...++. -++-|+++-
T Consensus 89 ~lP~~~vGHSlGcklhlLi~s~~~~~r~gniliSF 123 (250)
T PF07082_consen 89 YLPVYGVGHSLGCKLHLLIGSLFDVERAGNILISF 123 (250)
T ss_pred cCCeeeeecccchHHHHHHhhhccCcccceEEEec
Confidence 378889999999999988877654 566666553
No 182
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.22 E-value=0.012 Score=54.78 Aligned_cols=43 Identities=21% Similarity=0.257 Sum_probs=35.4
Q ss_pred HHHhcCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCcc
Q 013268 128 YLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (446)
Q Consensus 128 ~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~ 170 (446)
++.+.+.. ++.+|+|||+||.+++.+...+|+ +.+.++++|..
T Consensus 127 ~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSl 172 (264)
T COG2819 127 FIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSL 172 (264)
T ss_pred HHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchh
Confidence 44444443 679999999999999999999998 89999888753
No 183
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.95 E-value=0.014 Score=52.02 Aligned_cols=103 Identities=12% Similarity=0.029 Sum_probs=67.1
Q ss_pred CCCcEEEEECCCCCC-hhhHH---------------HHHHHhccCCcEEEEeCCCC---CCCCCCCCcCCCcchHHHHHH
Q 013268 64 TPLPCVVYCHGNSGC-RADAN---------------EAAVILLPSNITLFTLDFSG---SGLSDGDYVSLGWHEKDDLKV 124 (446)
Q Consensus 64 ~~~p~VVllHG~g~~-~~~~~---------------~~~~~L~~~Gy~Vi~~D~~G---~G~S~~~~~~~~~~~~~D~~~ 124 (446)
.+..++|++||.|-- +..|. ++++...+.||.|+..+--- +-.+...+.......++.+..
T Consensus 99 ~~~kLlVLIHGSGvVrAGQWARrLIIN~~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~kyirt~veh~~y 178 (297)
T KOG3967|consen 99 NPQKLLVLIHGSGVVRAGQWARRLIINEDLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKYIRTPVEHAKY 178 (297)
T ss_pred CccceEEEEecCceEecchHhhhhhhccccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchhccchHHHHHH
Confidence 456799999999832 22332 23445556699998887531 112222222222233666666
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC---ccEEEEe
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS---IAGMVLD 166 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~---v~~lVl~ 166 (446)
+..++........+.++.||+||...+.+..+.|+ |.++.+-
T Consensus 179 vw~~~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialT 223 (297)
T KOG3967|consen 179 VWKNIVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALT 223 (297)
T ss_pred HHHHHhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEee
Confidence 66666665566889999999999999999999886 6666654
No 184
>PLN02633 palmitoyl protein thioesterase family protein
Probab=96.90 E-value=0.052 Score=51.86 Aligned_cols=99 Identities=13% Similarity=0.039 Sum_probs=59.1
Q ss_pred CcEEEEECCCCCChh--hHHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEE
Q 013268 66 LPCVVYCHGNSGCRA--DANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (446)
Q Consensus 66 ~p~VVllHG~g~~~~--~~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lv 141 (446)
..++|+.||+|.+.. ....+.+.+... |..+.++.. |-+ . ...+-....+.+..+.+.+++.... +-+.++
T Consensus 25 ~~P~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i-g~~--~--~~s~~~~~~~Qve~vce~l~~~~~l~~G~naI 99 (314)
T PLN02633 25 SVPFIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI-GNG--V--GDSWLMPLTQQAEIACEKVKQMKELSQGYNIV 99 (314)
T ss_pred CCCeEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE-CCC--c--cccceeCHHHHHHHHHHHHhhchhhhCcEEEE
Confidence 356888999986533 344444444332 555655543 222 1 1111111134455555555543222 458999
Q ss_pred EechhHHHHHHHHHhCCC---ccEEEEeCCc
Q 013268 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (446)
Q Consensus 142 G~S~GG~ial~~a~~~p~---v~~lVl~sp~ 169 (446)
|+|.||.++-.++.+.|+ |+.+|.+++.
T Consensus 100 GfSQGGlflRa~ierc~~~p~V~nlISlggp 130 (314)
T PLN02633 100 GRSQGNLVARGLIEFCDGGPPVYNYISLAGP 130 (314)
T ss_pred EEccchHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999888653 8999987653
No 185
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=96.86 E-value=0.0038 Score=65.75 Aligned_cols=117 Identities=22% Similarity=0.317 Sum_probs=72.7
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCC---ChhhH--HHHHHHhccCCcEEEEeCCC----CCCCCCCCCcCCCcchHH
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSG---CRADA--NEAAVILLPSNITLFTLDFS----GSGLSDGDYVSLGWHEKD 120 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~---~~~~~--~~~~~~L~~~Gy~Vi~~D~~----G~G~S~~~~~~~~~~~~~ 120 (446)
|+..+|.|......+ .|++|++||++- +...+ ......+..+...|+++.+| |+.... +....+-.-..
T Consensus 97 LylNV~tp~~~~~~~-~pV~V~iHGG~~~~gs~~~~~~~~~~~~~~~~~VVvVt~~YRLG~lGF~st~-d~~~~gN~gl~ 174 (545)
T KOG1516|consen 97 LYLNVYTPQGCSESK-LPVMVYIHGGGFQFGSASSFEIISPAYVLLLKDVVVVTINYRLGPLGFLSTG-DSAAPGNLGLF 174 (545)
T ss_pred ceEEEeccCCCccCC-CCEEEEEeCCceeeccccchhhcCchhccccCCEEEEEecccceeceeeecC-CCCCCCcccHH
Confidence 445578887432212 899999999973 22222 22233455567899999998 332222 21112222367
Q ss_pred HHHHHHHHHHhcC-----CCCcEEEEEechhHHHHHHHHHhCC--C-ccEEEEeCC
Q 013268 121 DLKVVVSYLRGNK-----QTSRIGLWGRSMGAVTSLLYGAEDP--S-IAGMVLDSA 168 (446)
Q Consensus 121 D~~~~i~~l~~~~-----~~~~i~lvG~S~GG~ial~~a~~~p--~-v~~lVl~sp 168 (446)
|...+++|+++.. +.++|.|+|||.||..+..+...-. . +..+|..++
T Consensus 175 Dq~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG 230 (545)
T KOG1516|consen 175 DQLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSG 230 (545)
T ss_pred HHHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcc
Confidence 9999999998873 2389999999999998876654321 1 555555444
No 186
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=96.85 E-value=0.0043 Score=49.82 Aligned_cols=58 Identities=14% Similarity=0.196 Sum_probs=47.1
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHHHcCCCcEEEEeCC-CCCCC--ChhHHHHHHHHHHHh
Q 013268 223 TFIPALFGHASEDKFIRARHSDLIFNAYAGDKNIIKFDG-DHNSS--RPQFYYDSVSIFFYN 281 (446)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~~~~~~~~~~g-gH~~~--~~~~~~~~i~~Fl~~ 281 (446)
-..|+|++.++.|+.+|.+.++.+.+.+++ ..++..++ ||... ...-+.+.+.+||..
T Consensus 33 ~~~piL~l~~~~Dp~TP~~~a~~~~~~l~~-s~lvt~~g~gHg~~~~~s~C~~~~v~~yl~~ 93 (103)
T PF08386_consen 33 GAPPILVLGGTHDPVTPYEGARAMAARLPG-SRLVTVDGAGHGVYAGGSPCVDKAVDDYLLD 93 (103)
T ss_pred CCCCEEEEecCcCCCCcHHHHHHHHHHCCC-ceEEEEeccCcceecCCChHHHHHHHHHHHc
Confidence 358999999999999999999999999987 56888887 99876 334555666677764
No 187
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=96.83 E-value=0.0038 Score=62.72 Aligned_cols=83 Identities=14% Similarity=0.014 Sum_probs=60.4
Q ss_pred hHHHHHHHhccCCcEE-----EE-eCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHH
Q 013268 81 DANEAAVILLPSNITL-----FT-LDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (446)
Q Consensus 81 ~~~~~~~~L~~~Gy~V-----i~-~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a 154 (446)
.|..+++.|.+.||.. .+ +|+| .+.. ........+...|+.+.+.. ..+|+|+||||||.++..+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR---~~~~----~~~~~~~~lk~~ie~~~~~~-~~kv~li~HSmGgl~~~~fl 137 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWR---LSPA----ERDEYFTKLKQLIEEAYKKN-GKKVVLIAHSMGGLVARYFL 137 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechh---hchh----hHHHHHHHHHHHHHHHHHhc-CCcEEEEEeCCCchHHHHHH
Confidence 7888999998877752 33 7888 2221 00012567788888777664 68999999999999999888
Q ss_pred HhCC-------CccEEEEeCCccC
Q 013268 155 AEDP-------SIAGMVLDSAFSD 171 (446)
Q Consensus 155 ~~~p-------~v~~lVl~sp~~~ 171 (446)
...+ .|+++|.++++..
T Consensus 138 ~~~~~~~W~~~~i~~~i~i~~p~~ 161 (389)
T PF02450_consen 138 QWMPQEEWKDKYIKRFISIGTPFG 161 (389)
T ss_pred HhccchhhHHhhhhEEEEeCCCCC
Confidence 7753 1899999887654
No 188
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.83 E-value=0.0035 Score=65.77 Aligned_cols=98 Identities=17% Similarity=0.302 Sum_probs=61.4
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHh----------------ccCCcEEEEeCCCCCCCCCCCCcCC-C---cchHHHHHH
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVIL----------------LPSNITLFTLDFSGSGLSDGDYVSL-G---WHEKDDLKV 124 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L----------------~~~Gy~Vi~~D~~G~G~S~~~~~~~-~---~~~~~D~~~ 124 (446)
.+-+|+|++|..|+-..-+.++... ....|+.+++|+-+- .... | ....+.+.+
T Consensus 88 sGIPVLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe------~tAm~G~~l~dQtEYV~d 161 (973)
T KOG3724|consen 88 SGIPVLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEE------FTAMHGHILLDQTEYVND 161 (973)
T ss_pred CCceEEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccch------hhhhccHhHHHHHHHHHH
Confidence 4568999999999866655544322 223567777777531 1111 1 122667778
Q ss_pred HHHHHHhcCCC---------CcEEEEEechhHHHHHHHHHhC---CC-ccEEEEeCC
Q 013268 125 VVSYLRGNKQT---------SRIGLWGRSMGAVTSLLYGAED---PS-IAGMVLDSA 168 (446)
Q Consensus 125 ~i~~l~~~~~~---------~~i~lvG~S~GG~ial~~a~~~---p~-v~~lVl~sp 168 (446)
+|.++.+.+.. ..|+++||||||.+|...+..- ++ |.-++..+.
T Consensus 162 AIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlss 218 (973)
T KOG3724|consen 162 AIKYILSLYRGEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSS 218 (973)
T ss_pred HHHHHHHHhhcccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcC
Confidence 88888766432 3499999999999998766532 22 555665543
No 189
>PLN02209 serine carboxypeptidase
Probab=96.76 E-value=0.035 Score=56.47 Aligned_cols=133 Identities=15% Similarity=0.179 Sum_probs=80.0
Q ss_pred EEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHH----------------Hhcc------CCcEEE
Q 013268 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV----------------ILLP------SNITLF 97 (446)
Q Consensus 40 v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~----------------~L~~------~Gy~Vi 97 (446)
+.+....+..+.++.+.... .....|+|+++-|++|++..+..+.+ .+.. +-.+++
T Consensus 44 ~~v~~~~~~~lf~~f~es~~--~~~~~Pl~lWlnGGPG~SS~~g~f~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anll 121 (437)
T PLN02209 44 IGIGEEENVQFFYYFIKSDK--NPQEDPLIIWLNGGPGCSCLSGLFFENGPLALKNKVYNGSVPSLVSTTYSWTKTANII 121 (437)
T ss_pred EEecCCCCeEEEEEEEecCC--CCCCCCEEEEECCCCcHHHhhhHHHhcCCceeccCCCCCCcccceeCCCchhhcCcEE
Confidence 33433446677777665442 34568999999999987765432211 1111 125789
Q ss_pred EeCCC-CCCCCCCCCc-CCCc--chHHHHHHHHHHHHhcCC---CCcEEEEEechhHHHHHHHHHh----C-----CC--
Q 013268 98 TLDFS-GSGLSDGDYV-SLGW--HEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----PS-- 159 (446)
Q Consensus 98 ~~D~~-G~G~S~~~~~-~~~~--~~~~D~~~~i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~----~-----p~-- 159 (446)
-+|.| |.|.|..... .... .+++|+..++....+..+ ..+++|+|.|+||..+-.+|.. + +.
T Consensus 122 fiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~in 201 (437)
T PLN02209 122 FLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPIN 201 (437)
T ss_pred EecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCcee
Confidence 99955 8888853321 1111 124555555543333322 2589999999999766555542 2 22
Q ss_pred ccEEEEeCCccCHHH
Q 013268 160 IAGMVLDSAFSDLFD 174 (446)
Q Consensus 160 v~~lVl~sp~~~~~~ 174 (446)
++|+++.+++.+...
T Consensus 202 l~Gi~igng~td~~~ 216 (437)
T PLN02209 202 LQGYVLGNPITHIEF 216 (437)
T ss_pred eeeEEecCcccChhh
Confidence 789999999887543
No 190
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=96.71 E-value=0.022 Score=57.90 Aligned_cols=126 Identities=16% Similarity=0.188 Sum_probs=76.4
Q ss_pred CCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHH---H-------------Hhcc------CCcEEEEeCCC-
Q 013268 46 RGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAA---V-------------ILLP------SNITLFTLDFS- 102 (446)
Q Consensus 46 dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~---~-------------~L~~------~Gy~Vi~~D~~- 102 (446)
.+..+.++.+.... .....|+||++-|++|++.....+. . .+.. +-.+++.+|.|
T Consensus 48 ~~~~lfy~f~es~~--~~~~~P~~lWlnGGPG~SS~~g~~~e~GP~~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPv 125 (433)
T PLN03016 48 ENVQFFYYFIKSEN--NPKEDPLLIWLNGGPGCSCLGGIIFENGPVGLKFEVFNGSAPSLFSTTYSWTKMANIIFLDQPV 125 (433)
T ss_pred CCeEEEEEEEecCC--CcccCCEEEEEcCCCcHHHHHHHHHhcCCceeeccccCCCCCceeeCCCchhhcCcEEEecCCC
Confidence 45677877765542 3457899999999998765432111 1 1111 12679999955
Q ss_pred CCCCCCCCCcCCCcc---hHHHHHHHHH-HHHhcCC--CCcEEEEEechhHHHHHHHHHh----C-----CC--ccEEEE
Q 013268 103 GSGLSDGDYVSLGWH---EKDDLKVVVS-YLRGNKQ--TSRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGMVL 165 (446)
Q Consensus 103 G~G~S~~~~~~~~~~---~~~D~~~~i~-~l~~~~~--~~~i~lvG~S~GG~ial~~a~~----~-----p~--v~~lVl 165 (446)
|.|.|.......... .++++..++. |+..... ..+++|+|.|+||..+-.+|.. + +. ++|+++
T Consensus 126 GtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~i 205 (433)
T PLN03016 126 GSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYML 205 (433)
T ss_pred CCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEe
Confidence 888886432211111 2345554443 3333322 3789999999999866655543 2 22 899999
Q ss_pred eCCccCHH
Q 013268 166 DSAFSDLF 173 (446)
Q Consensus 166 ~sp~~~~~ 173 (446)
..|+.+..
T Consensus 206 GNg~t~~~ 213 (433)
T PLN03016 206 GNPVTYMD 213 (433)
T ss_pred cCCCcCch
Confidence 98877543
No 191
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.71 E-value=0.0064 Score=59.48 Aligned_cols=101 Identities=18% Similarity=0.184 Sum_probs=72.0
Q ss_pred cEEEEECCCCCChhhHHH---HHHHhc-cCCcEEEEeCCCCCCCCCCCCc-------CCCc----chHHHHHHHHHHHHh
Q 013268 67 PCVVYCHGNSGCRADANE---AAVILL-PSNITLFTLDFSGSGLSDGDYV-------SLGW----HEKDDLKVVVSYLRG 131 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~---~~~~L~-~~Gy~Vi~~D~~G~G~S~~~~~-------~~~~----~~~~D~~~~i~~l~~ 131 (446)
.+|++.-|.-|+.+.+.. ++-.++ +.+-.++..++|-+|+|..-.. ..++ +...|.+..+..|+.
T Consensus 81 gPIffYtGNEGdie~Fa~ntGFm~D~Ap~~~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~ 160 (492)
T KOG2183|consen 81 GPIFFYTGNEGDIEWFANNTGFMWDLAPELKALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKR 160 (492)
T ss_pred CceEEEeCCcccHHHHHhccchHHhhhHhhCceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhh
Confidence 567788888887665532 222222 2366799999999999862111 1121 237889999999988
Q ss_pred cCCC--CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeC
Q 013268 132 NKQT--SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDS 167 (446)
Q Consensus 132 ~~~~--~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~s 167 (446)
.... .+|+.+|-|+||+++..+=.++|. +.|....+
T Consensus 161 ~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaS 199 (492)
T KOG2183|consen 161 DLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAAS 199 (492)
T ss_pred ccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhcc
Confidence 7544 789999999999999999999999 55555443
No 192
>PLN02606 palmitoyl-protein thioesterase
Probab=96.68 E-value=0.013 Score=55.84 Aligned_cols=99 Identities=14% Similarity=0.090 Sum_probs=60.8
Q ss_pred CcEEEEECCCC--CChhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEE
Q 013268 66 LPCVVYCHGNS--GCRADANEAAVILLP-SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLW 141 (446)
Q Consensus 66 ~p~VVllHG~g--~~~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lv 141 (446)
..+||++||+| .+...+..+.+.+.. .|+.+..+- .|-+... .+-....+.+..+.+.+++.... +-+.++
T Consensus 26 ~~PvViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~-ig~~~~~----s~~~~~~~Qv~~vce~l~~~~~L~~G~naI 100 (306)
T PLN02606 26 SVPFVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVE-IGNGVQD----SLFMPLRQQASIACEKIKQMKELSEGYNIV 100 (306)
T ss_pred CCCEEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEE-ECCCccc----ccccCHHHHHHHHHHHHhcchhhcCceEEE
Confidence 45688999999 445566666666642 255444443 2322211 11011134555555666553222 458999
Q ss_pred EechhHHHHHHHHHhCCC---ccEEEEeCCc
Q 013268 142 GRSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (446)
Q Consensus 142 G~S~GG~ial~~a~~~p~---v~~lVl~sp~ 169 (446)
|+|.||.++-.++.+.|+ |+-+|.+++.
T Consensus 101 GfSQGglflRa~ierc~~~p~V~nlISlggp 131 (306)
T PLN02606 101 AESQGNLVARGLIEFCDNAPPVINYVSLGGP 131 (306)
T ss_pred EEcchhHHHHHHHHHCCCCCCcceEEEecCC
Confidence 999999999999988643 8999987654
No 193
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=96.61 E-value=0.014 Score=53.94 Aligned_cols=98 Identities=12% Similarity=0.158 Sum_probs=63.7
Q ss_pred cEEEEECCCCCChhh--HHHHHHHhccC-CcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEEE
Q 013268 67 PCVVYCHGNSGCRAD--ANEAAVILLPS-NITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWG 142 (446)
Q Consensus 67 p~VVllHG~g~~~~~--~~~~~~~L~~~-Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lvG 142 (446)
-++|++||.+....+ +..+.+.+.+. |..|+++|. |-|.-.+.. .. -.+.+..+.+.+...... +-+.++|
T Consensus 24 ~P~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~lei-g~g~~~s~l--~p--l~~Qv~~~ce~v~~m~~lsqGynivg 98 (296)
T KOG2541|consen 24 VPVIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEI-GDGIKDSSL--MP--LWEQVDVACEKVKQMPELSQGYNIVG 98 (296)
T ss_pred CCEEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEe-cCCcchhhh--cc--HHHHHHHHHHHHhcchhccCceEEEE
Confidence 568889999976555 55666666554 888999987 333111111 11 134455555666543333 5689999
Q ss_pred echhHHHHHHHHHhCCC--ccEEEEeCCc
Q 013268 143 RSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p~--v~~lVl~sp~ 169 (446)
.|.||.++-.++..-++ |+..|.++++
T Consensus 99 ~SQGglv~Raliq~cd~ppV~n~ISL~gP 127 (296)
T KOG2541|consen 99 YSQGGLVARALIQFCDNPPVKNFISLGGP 127 (296)
T ss_pred EccccHHHHHHHHhCCCCCcceeEeccCC
Confidence 99999999888877554 8888876654
No 194
>PF04083 Abhydro_lipase: Partial alpha/beta-hydrolase lipase region; InterPro: IPR006693 The alpha/beta hydrolase fold is common to several hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is similar: an alpha/beta sheet, not barrel, of eight beta-sheets connected by alpha-helices []. This entry represents the N-terminal part of an alpha/beta hydrolase domain found in a number of lipases.; GO: 0006629 lipid metabolic process; PDB: 1K8Q_B 1HLG_B.
Probab=96.57 E-value=0.0076 Score=43.47 Aligned_cols=50 Identities=20% Similarity=0.281 Sum_probs=29.2
Q ss_pred CceeeEEEEEECCCCcEEEEEEEecCC--CCCCCCCcEEEEECCCCCChhhH
Q 013268 33 RSYKRQDLEIRNARGHVLQCSHYMPSP--FPEDTPLPCVVYCHGNSGCRADA 82 (446)
Q Consensus 33 ~~~~~~~v~~~~~dG~~L~~~~~~P~~--~~~~~~~p~VVllHG~g~~~~~~ 82 (446)
..|+-|+..+++.||..|......+.. .+...++|+|++.||+.+++..|
T Consensus 8 ~GY~~E~h~V~T~DGYiL~l~RIp~~~~~~~~~~~k~pVll~HGL~~ss~~w 59 (63)
T PF04083_consen 8 HGYPCEEHEVTTEDGYILTLHRIPPGKNSSNQNKKKPPVLLQHGLLQSSDDW 59 (63)
T ss_dssp TT---EEEEEE-TTSEEEEEEEE-SBTTCTTTTTT--EEEEE--TT--GGGG
T ss_pred cCCCcEEEEEEeCCCcEEEEEEccCCCCCcccCCCCCcEEEECCcccChHHH
Confidence 346678999999999999876554432 12346789999999999998876
No 195
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=96.48 E-value=0.0053 Score=57.88 Aligned_cols=103 Identities=14% Similarity=0.082 Sum_probs=50.1
Q ss_pred CCcEEEEECCCCCCh---hhHHHH---HHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-Cc
Q 013268 65 PLPCVVYCHGNSGCR---ADANEA---AVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SR 137 (446)
Q Consensus 65 ~~p~VVllHG~g~~~---~~~~~~---~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~ 137 (446)
+..+||++||+|.+. ..+..+ ++.... |.-|..++.- -+.+......+-...-+.+..+.+.+++.... +-
T Consensus 4 ~~~PvViwHGmGD~~~~~~~m~~i~~~i~~~~P-G~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G 81 (279)
T PF02089_consen 4 SPLPVVIWHGMGDSCCNPSSMGSIKELIEEQHP-GTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANG 81 (279)
T ss_dssp SS--EEEE--TT--S--TTTHHHHHHHHHHHST-T--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-
T ss_pred CCCcEEEEEcCccccCChhHHHHHHHHHHHhCC-CceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcc
Confidence 345789999999642 234333 333332 7778888773 22111000000001122334444555443322 56
Q ss_pred EEEEEechhHHHHHHHHHhCCC--ccEEEEeCCc
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~--v~~lVl~sp~ 169 (446)
+.++|+|.||.+.-.++.+.+. |+.+|.++++
T Consensus 82 ~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggp 115 (279)
T PF02089_consen 82 FNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGP 115 (279)
T ss_dssp EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--
T ss_pred eeeeeeccccHHHHHHHHHCCCCCceeEEEecCc
Confidence 9999999999999999998765 9999987653
No 196
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=96.40 E-value=0.034 Score=55.93 Aligned_cols=127 Identities=17% Similarity=0.090 Sum_probs=88.1
Q ss_pred ECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHH-----HHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC--
Q 013268 43 RNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADAN-----EAAVILLPSNITLFTLDFSGSGLSDGDYVSLG-- 115 (446)
Q Consensus 43 ~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~-----~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~-- 115 (446)
.+.++....=+.|.+... .....|+.||+.|=|.....|. .+..+-.+.|-.|+.+++|-+|.|........
T Consensus 64 ~~~~~~~~Qq~~y~n~~~-~~~~gPiFLmIGGEgp~~~~wv~~~~~~~~~~AkkfgA~v~~lEHRFYG~S~P~~~~st~n 142 (514)
T KOG2182|consen 64 DSSNGKFFQQRFYNNNQW-AKPGGPIFLMIGGEGPESDKWVGNENLTWLQWAKKFGATVFQLEHRFYGQSSPIGDLSTSN 142 (514)
T ss_pred hcchhhhhhhheeecccc-ccCCCceEEEEcCCCCCCCCccccCcchHHHHHHHhCCeeEEeeeeccccCCCCCCCcccc
Confidence 444444444444544321 2456799999999886554442 23444445588999999999998853222111
Q ss_pred ------cchHHHHHHHHHHHHhcCCC---CcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCcc
Q 013268 116 ------WHEKDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFS 170 (446)
Q Consensus 116 ------~~~~~D~~~~i~~l~~~~~~---~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~ 170 (446)
.+...|+..+|+.+..+.+. .+++.+|-|+-|.++..+=.++|+ +.|.|..+++.
T Consensus 143 lk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 143 LKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 12378888888888877654 389999999999999999999999 77888777654
No 197
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=95.89 E-value=0.1 Score=52.95 Aligned_cols=130 Identities=17% Similarity=0.262 Sum_probs=80.9
Q ss_pred EEEECCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHHHH-----------Hhcc------CCcEEEEeCCC
Q 013268 40 LEIRNARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEAAV-----------ILLP------SNITLFTLDFS 102 (446)
Q Consensus 40 v~~~~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~~~-----------~L~~------~Gy~Vi~~D~~ 102 (446)
+.+....+..|.++.+.... .....|+||++-|++|.+.....+.+ .|.. +--+++-+|.|
T Consensus 49 v~v~~~~~~~LFYwf~eS~~--~P~~dPlvLWLnGGPGCSSl~G~~~E~GPf~v~~~G~tL~~N~ySWnk~aNiLfLd~P 126 (454)
T KOG1282|consen 49 VTVNESEGRQLFYWFFESEN--NPETDPLVLWLNGGPGCSSLGGLFEENGPFRVKYNGKTLYLNPYSWNKEANILFLDQP 126 (454)
T ss_pred EECCCCCCceEEEEEEEccC--CCCCCCEEEEeCCCCCccchhhhhhhcCCeEEcCCCCcceeCCccccccccEEEEecC
Confidence 44444568999998776542 34568999999999987654321111 0111 12468888988
Q ss_pred -CCCCCCCCCcC-C--C-cchHHHHHH-HHHHHHhcCCC--CcEEEEEechhHHHHHHHHHh----C-----CC--ccEE
Q 013268 103 -GSGLSDGDYVS-L--G-WHEKDDLKV-VVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE----D-----PS--IAGM 163 (446)
Q Consensus 103 -G~G~S~~~~~~-~--~-~~~~~D~~~-~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~----~-----p~--v~~l 163 (446)
|.|.|-..... . + ...++|... +.+|+.+.++. .++.|.|-|++|...-.+|.+ + |. ++|+
T Consensus 127 vGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~ 206 (454)
T KOG1282|consen 127 VGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGY 206 (454)
T ss_pred CcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEE
Confidence 77777532211 1 1 112455444 45677665444 789999999999666555543 2 22 8999
Q ss_pred EEeCCccC
Q 013268 164 VLDSAFSD 171 (446)
Q Consensus 164 Vl~sp~~~ 171 (446)
++..|..+
T Consensus 207 ~IGNg~td 214 (454)
T KOG1282|consen 207 AIGNGLTD 214 (454)
T ss_pred EecCcccC
Confidence 99887665
No 198
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.80 E-value=0.022 Score=49.10 Aligned_cols=51 Identities=12% Similarity=0.055 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC-----CccEEEEeCCcc
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAFS 170 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p-----~v~~lVl~sp~~ 170 (446)
..+...++......+..+|.++|||+||.+|..++.... .+..++..+++.
T Consensus 12 ~~i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 12 NLVLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 344444555444446689999999999999999887753 244455555443
No 199
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=95.69 E-value=0.023 Score=47.98 Aligned_cols=50 Identities=18% Similarity=0.173 Sum_probs=32.4
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC----C---C-ccEEEEeCCcc
Q 013268 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED----P---S-IAGMVLDSAFS 170 (446)
Q Consensus 121 D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~----p---~-v~~lVl~sp~~ 170 (446)
.+.+.++.+.+.....+|.+.|||+||.+|..++... + . ++.+...+|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 4444555555555557899999999999999888762 1 2 56666655554
No 200
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=95.49 E-value=0.029 Score=58.02 Aligned_cols=86 Identities=14% Similarity=0.015 Sum_probs=57.1
Q ss_pred hHHHHHHHhccCCcE-----EEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 81 DANEAAVILLPSNIT-----LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 81 ~~~~~~~~L~~~Gy~-----Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
.|..+++.|+..||. ...+|+| .+....... ......+...|+.+.+..+..+++|+||||||.+++.+..
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWR---ls~~~le~r-d~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~ 232 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWR---LSFQNTEVR-DQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMK 232 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccc---cCccchhhh-hHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHH
Confidence 457889999998885 3445555 221111000 1114667888888876655689999999999999998776
Q ss_pred hC-----------CC-----ccEEEEeCCcc
Q 013268 156 ED-----------PS-----IAGMVLDSAFS 170 (446)
Q Consensus 156 ~~-----------p~-----v~~lVl~sp~~ 170 (446)
.- ++ |++.|.++++.
T Consensus 233 wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 233 WVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred hccccccccCCcchHHHHHHHHHheeccccc
Confidence 32 21 78888887654
No 201
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=95.38 E-value=0.05 Score=50.35 Aligned_cols=52 Identities=10% Similarity=0.056 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC-----C-CccEEEEeCCccC
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED-----P-SIAGMVLDSAFSD 171 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~-----p-~v~~lVl~sp~~~ 171 (446)
.++...+..++++.+..++.+.|||+||.+|..++... + .+.++...+|...
T Consensus 112 ~~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~vg 169 (229)
T cd00519 112 NQVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRVG 169 (229)
T ss_pred HHHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCCC
Confidence 34444455555555567899999999999999888752 2 2677776666654
No 202
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=95.33 E-value=3.8 Score=41.68 Aligned_cols=108 Identities=20% Similarity=0.172 Sum_probs=66.3
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHHHhccCCcE-EEEeCCCCCCCCCCCCcCCCcch-HHHHHHHHHHHHhcCCC--Cc
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAVILLPSNIT-LFTLDFSGSGLSDGDYVSLGWHE-KDDLKVVVSYLRGNKQT--SR 137 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~-Vi~~D~~G~G~S~~~~~~~~~~~-~~D~~~~i~~l~~~~~~--~~ 137 (446)
++-+.|..|++-|+-. ++.+..+. .+.+.|.. .+.-|.|=-|.+- ..+..+ -+.+..+|+...+.++. +.
T Consensus 285 GD~KPPL~VYFSGyR~-aEGFEgy~-MMk~Lg~PfLL~~DpRleGGaF----YlGs~eyE~~I~~~I~~~L~~LgF~~~q 358 (511)
T TIGR03712 285 GDFKPPLNVYFSGYRP-AEGFEGYF-MMKRLGAPFLLIGDPRLEGGAF----YLGSDEYEQGIINVIQEKLDYLGFDHDQ 358 (511)
T ss_pred cCCCCCeEEeeccCcc-cCcchhHH-HHHhcCCCeEEeecccccccee----eeCcHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 5567789999999965 33332211 22222443 3445666444331 122221 23345555544444465 67
Q ss_pred EEEEEechhHHHHHHHHHhCCCccEEEEeCCccCHHHHH
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAFSDLFDLM 176 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~~~~~~~~ 176 (446)
++|-|.|||.+-|+.+++.-. ..++|+.-|..++....
T Consensus 359 LILSGlSMGTfgAlYYga~l~-P~AIiVgKPL~NLGtiA 396 (511)
T TIGR03712 359 LILSGLSMGTFGALYYGAKLS-PHAIIVGKPLVNLGTIA 396 (511)
T ss_pred eeeccccccchhhhhhcccCC-CceEEEcCcccchhhhh
Confidence 999999999999999998754 58899888888876543
No 203
>KOG4388 consensus Hormone-sensitive lipase HSL [Lipid transport and metabolism]
Probab=95.17 E-value=0.032 Score=56.85 Aligned_cols=102 Identities=15% Similarity=0.149 Sum_probs=64.6
Q ss_pred CCCCCcEEEEECCCCC---ChhhHHHHH-HHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcC---C
Q 013268 62 EDTPLPCVVYCHGNSG---CRADANEAA-VILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNK---Q 134 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~---~~~~~~~~~-~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~---~ 134 (446)
...++-.|+-+||+|- ++.....+. +|-...|..|+.+||.- ....+.. ...+.+.-+.-|+.++. +
T Consensus 392 ~p~S~sli~HcHGGGfVAqsSkSHE~YLr~Wa~aL~cPiiSVdYSL---APEaPFP---RaleEv~fAYcW~inn~allG 465 (880)
T KOG4388|consen 392 APRSRSLIVHCHGGGFVAQSSKSHEPYLRSWAQALGCPIISVDYSL---APEAPFP---RALEEVFFAYCWAINNCALLG 465 (880)
T ss_pred CCCCceEEEEecCCceeeeccccccHHHHHHHHHhCCCeEEeeecc---CCCCCCC---cHHHHHHHHHHHHhcCHHHhC
Confidence 3345678999999983 222222222 23333489999999973 2222222 23577777888887763 2
Q ss_pred C--CcEEEEEechhHHHHHHHHHh----CCC-ccEEEEeCCc
Q 013268 135 T--SRIGLWGRSMGAVTSLLYGAE----DPS-IAGMVLDSAF 169 (446)
Q Consensus 135 ~--~~i~lvG~S~GG~ial~~a~~----~p~-v~~lVl~sp~ 169 (446)
. ++|+++|-|.||.+.+-++.+ .-+ .+|+++..++
T Consensus 466 ~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~laY~p 507 (880)
T KOG4388|consen 466 STGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLMLAYPP 507 (880)
T ss_pred cccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEEecCh
Confidence 2 899999999999876554443 333 5888886543
No 204
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=94.92 E-value=0.046 Score=54.71 Aligned_cols=76 Identities=16% Similarity=0.021 Sum_probs=54.8
Q ss_pred hhHHHHHHHhccCCcE------EEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHH
Q 013268 80 ADANEAAVILLPSNIT------LFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLY 153 (446)
Q Consensus 80 ~~~~~~~~~L~~~Gy~------Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~ 153 (446)
..|..+++.|+.-||. -..+|+| .|........ .....++..|+..-+..+.+||+|++|||||.+.+.+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwR---ls~~~~e~rd-~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyF 199 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWR---LSYHNSEERD-QYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYF 199 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchh---hccCChhHHH-HHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHH
Confidence 4677888888888876 4567888 3221111111 1256778888888777777999999999999999999
Q ss_pred HHhCCC
Q 013268 154 GAEDPS 159 (446)
Q Consensus 154 a~~~p~ 159 (446)
....+.
T Consensus 200 l~w~~~ 205 (473)
T KOG2369|consen 200 LKWVEA 205 (473)
T ss_pred Hhcccc
Confidence 887764
No 205
>PLN02454 triacylglycerol lipase
Probab=94.83 E-value=0.1 Score=52.00 Aligned_cols=53 Identities=21% Similarity=0.230 Sum_probs=36.1
Q ss_pred HHHHHHHHHHHHhcCCCC--cEEEEEechhHHHHHHHHHhC-------C--CccEEEEeCCccC
Q 013268 119 KDDLKVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAED-------P--SIAGMVLDSAFSD 171 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~~--~i~lvG~S~GG~ial~~a~~~-------p--~v~~lVl~sp~~~ 171 (446)
.+++...++.+.+.+... +|.+.|||+||.+|+.+|... + .|..+++.+|-..
T Consensus 209 r~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRVG 272 (414)
T PLN02454 209 RSQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQVG 272 (414)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCccc
Confidence 345666666666665544 499999999999999988541 1 2556666666554
No 206
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=94.50 E-value=1.1 Score=46.32 Aligned_cols=129 Identities=15% Similarity=0.142 Sum_probs=77.3
Q ss_pred EECCCCc--EEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH----HHHhccCCcEEEEeCCCCCCCCCC----CC
Q 013268 42 IRNARGH--VLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA----AVILLPSNITLFTLDFSGSGLSDG----DY 111 (446)
Q Consensus 42 ~~~~dG~--~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~----~~~L~~~Gy~Vi~~D~~G~G~S~~----~~ 111 (446)
+...++. .|...+|+|.. = .--++.+-|+|-........ ...-+.+||.++.-|- ||..+.. ..
T Consensus 7 ~~~~~~~~~~i~fev~LP~~--W---NgR~~~~GgGG~~G~i~~~~~~~~~~~~~~~G~A~~~TD~-Gh~~~~~~~~~~~ 80 (474)
T PF07519_consen 7 IHPSDGSAPNIRFEVWLPDN--W---NGRFLQVGGGGFAGGINYADGKASMATALARGYATASTDS-GHQGSAGSDDASF 80 (474)
T ss_pred EecCCCCcceEEEEEECChh--h---ccCeEEECCCeeeCcccccccccccchhhhcCeEEEEecC-CCCCCcccccccc
Confidence 3444444 88888999962 1 12344444443221111111 2233456999999997 5544432 11
Q ss_pred c-------CCCcchHHHHHHHHHHHHhc-CC--CCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHH
Q 013268 112 V-------SLGWHEKDDLKVVVSYLRGN-KQ--TSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLM 176 (446)
Q Consensus 112 ~-------~~~~~~~~D~~~~i~~l~~~-~~--~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~ 176 (446)
. .+++..+.+...+-+.|.+. ++ ..+-+..|-|-||.-++..|.++|+ ++|||..+|..+...+.
T Consensus 81 ~~n~~~~~dfa~ra~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~~~~~~~ 156 (474)
T PF07519_consen 81 GNNPEALLDFAYRALHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAINWTHLQ 156 (474)
T ss_pred cCCHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchHHHHHHH
Confidence 1 01112233334444444433 22 2678999999999999999999999 99999999998876543
No 207
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.26 E-value=0.18 Score=43.57 Aligned_cols=59 Identities=17% Similarity=0.154 Sum_probs=45.8
Q ss_pred HHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccCHHHHHH
Q 013268 119 KDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSDLFDLML 177 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~~~~~~~ 177 (446)
++.-.+.-.|+++..-.....+-|-||||+.|..+.-++|+ +.++|..++..+..+.+.
T Consensus 84 ~~rH~AyerYv~eEalpgs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvYdardffg 143 (227)
T COG4947 84 AERHRAYERYVIEEALPGSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVYDARDFFG 143 (227)
T ss_pred HHHHHHHHHHHHHhhcCCCccccccchhhhhhhhhheeChhHhhhheeecceeeHHHhcc
Confidence 33344555677666444667889999999999999999999 899999999888765543
No 208
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=94.24 E-value=0.089 Score=47.56 Aligned_cols=71 Identities=18% Similarity=0.129 Sum_probs=47.3
Q ss_pred HHHhccCCcEEEEeCCCCCCCCC------CCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhC
Q 013268 86 AVILLPSNITLFTLDFSGSGLSD------GDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 86 ~~~L~~~Gy~Vi~~D~~G~G~S~------~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~ 157 (446)
+..|... .+|++|=||-..... ............|+.++.++..++.+. .+++|+|||.|+.+..++..+.
T Consensus 39 as~F~~~-~~vfAP~YRQatl~~~~~~~~~~~~~a~~~ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 39 ASAFNGV-CNVFAPRYRQATLYAFLDTDREDAEKAFDLAYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hhhhhcC-CccccChhhcchhhhhhccCcchhHHHHHhhHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 3445443 588999888432211 110000001267899999888777655 6999999999999999998874
No 209
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=94.00 E-value=0.3 Score=49.59 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=60.8
Q ss_pred CCCCCcEEEEECCCCCChhhHHHHHH-------------------HhccCCcEEEEeC-CCCCCCCCC--CCcC-CCcch
Q 013268 62 EDTPLPCVVYCHGNSGCRADANEAAV-------------------ILLPSNITLFTLD-FSGSGLSDG--DYVS-LGWHE 118 (446)
Q Consensus 62 ~~~~~p~VVllHG~g~~~~~~~~~~~-------------------~L~~~Gy~Vi~~D-~~G~G~S~~--~~~~-~~~~~ 118 (446)
...+.|+|+++.|++|++..+..+.+ .|... -.++-+| --|.|.|.. +... ..+..
T Consensus 97 dp~~rPvi~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~-adLvFiDqPvGTGfS~a~~~e~~~d~~~~ 175 (498)
T COG2939 97 DPANRPVIFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDF-ADLVFIDQPVGTGFSRALGDEKKKDFEGA 175 (498)
T ss_pred CCCCCceEEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccC-CceEEEecCcccCcccccccccccchhcc
Confidence 44578999999999998887765532 11121 3688899 458888873 1111 11122
Q ss_pred HHHHHHHHHHHHhcC----CC-CcEEEEEechhHHHHHHHHHh
Q 013268 119 KDDLKVVVSYLRGNK----QT-SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~----~~-~~i~lvG~S~GG~ial~~a~~ 156 (446)
.+|+..+.+.+.+.. .. .+.+|+|-|+||.-+..+|..
T Consensus 176 ~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~ 218 (498)
T COG2939 176 GKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHE 218 (498)
T ss_pred chhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHH
Confidence 466666665554432 22 689999999999888777764
No 210
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=93.89 E-value=0.27 Score=43.71 Aligned_cols=75 Identities=20% Similarity=0.143 Sum_probs=45.2
Q ss_pred CCcEEEEeCCCCCCCCCCCCcCCCcc---hHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHh--CCC-----cc
Q 013268 92 SNITLFTLDFSGSGLSDGDYVSLGWH---EKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE--DPS-----IA 161 (446)
Q Consensus 92 ~Gy~Vi~~D~~G~G~S~~~~~~~~~~---~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~--~p~-----v~ 161 (446)
....+..++||-..... .+... -..++...++....+-...+|+|+|+|.||.++..++.. .+. |.
T Consensus 38 ~~~~~~~V~YpA~~~~~----~y~~S~~~G~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~ 113 (179)
T PF01083_consen 38 TSVAVQGVEYPASLGPN----SYGDSVAAGVANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIA 113 (179)
T ss_dssp CEEEEEE--S---SCGG----SCHHHHHHHHHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEE
T ss_pred CeeEEEecCCCCCCCcc----cccccHHHHHHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEE
Confidence 34666677887332211 11101 145666666666666566899999999999999999887 221 88
Q ss_pred EEEEeCCcc
Q 013268 162 GMVLDSAFS 170 (446)
Q Consensus 162 ~lVl~sp~~ 170 (446)
++++++-+.
T Consensus 114 avvlfGdP~ 122 (179)
T PF01083_consen 114 AVVLFGDPR 122 (179)
T ss_dssp EEEEES-TT
T ss_pred EEEEecCCc
Confidence 888876554
No 211
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.64 E-value=0.2 Score=42.82 Aligned_cols=76 Identities=21% Similarity=0.176 Sum_probs=47.6
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCc-EEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEe
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGR 143 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy-~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~ 143 (446)
+...||++-|+|........+. ...++ .++++||+..... + |+. + ...|-++.+
T Consensus 10 gd~LIvyFaGwgtpps~v~HLi---lpeN~dl~lcYDY~dl~ld------f------Dfs-A---------y~hirlvAw 64 (214)
T COG2830 10 GDHLIVYFAGWGTPPSAVNHLI---LPENHDLLLCYDYQDLNLD------F------DFS-A---------YRHIRLVAW 64 (214)
T ss_pred CCEEEEEEecCCCCHHHHhhcc---CCCCCcEEEEeehhhcCcc------c------chh-h---------hhhhhhhhh
Confidence 3458999999998876654432 23344 5688999743211 0 111 1 134568999
Q ss_pred chhHHHHHHHHHhCCCccEEEEe
Q 013268 144 SMGAVTSLLYGAEDPSIAGMVLD 166 (446)
Q Consensus 144 S~GG~ial~~a~~~p~v~~lVl~ 166 (446)
|||-.+|-++....+ ++..+.+
T Consensus 65 SMGVwvAeR~lqg~~-lksatAi 86 (214)
T COG2830 65 SMGVWVAERVLQGIR-LKSATAI 86 (214)
T ss_pred hHHHHHHHHHHhhcc-ccceeee
Confidence 999999998877665 4444443
No 212
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=93.26 E-value=0.21 Score=45.99 Aligned_cols=34 Identities=18% Similarity=0.052 Sum_probs=26.5
Q ss_pred CcEEEEEechhHHHHHHHHHhCC-----CccEEEEeCCc
Q 013268 136 SRIGLWGRSMGAVTSLLYGAEDP-----SIAGMVLDSAF 169 (446)
Q Consensus 136 ~~i~lvG~S~GG~ial~~a~~~p-----~v~~lVl~sp~ 169 (446)
+++.+.|||.||.+|..++...+ +|..++...++
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgP 122 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGP 122 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCC
Confidence 46999999999999999998843 26777755443
No 213
>KOG2521 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.91 E-value=1.5 Score=42.93 Aligned_cols=222 Identities=13% Similarity=0.061 Sum_probs=111.1
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCC--CCcEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ--TSRIGLW 141 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~--~~~i~lv 141 (446)
..+|+|+++.+.|..............+.||.++.+-.|-+-..-... ...-........+..+.+... ..++.+-
T Consensus 37 s~k~Iv~~~gWag~~~r~l~ky~~~Yq~~g~~~~~~tap~~~~~~~~s--~~~~sl~~~~~~l~~L~~~~~~~~~pi~fh 114 (350)
T KOG2521|consen 37 SEKPIVVLLGWAGAIDRNLMKYSKIYQDKGYIVVRITAPCPSVFLSAS--RRILSLSLASTRLSELLSDYNSDPCPIIFH 114 (350)
T ss_pred ccccEEEEeeeccccchhHHHHHHHHhcCCceEEEecCcccccccccc--cccchhhHHHHHHHHHhhhccCCcCceEEE
Confidence 344666666666655555556777888889999999888553221111 111112334344444444333 4688888
Q ss_pred EechhHHHHHHHH---Hh-C-CC----ccEEEEeCCccCHHHHH-----------HHHH---HHHhhhCCchhHHHH---
Q 013268 142 GRSMGAVTSLLYG---AE-D-PS----IAGMVLDSAFSDLFDLM-----------LELV---DVYKIRLPKFTVKMA--- 195 (446)
Q Consensus 142 G~S~GG~ial~~a---~~-~-p~----v~~lVl~sp~~~~~~~~-----------~~~~---~~~~~~~~~~~~~~~--- 195 (446)
-+|+||...+... .. . |. ..+++..+......... .... ......+..+.....
T Consensus 115 ~FS~ng~~~~~si~~~~~~~~~~~~~~~~~~~fdS~p~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 194 (350)
T KOG2521|consen 115 VFSGNGVRLMYSISLQLIKHEPKAAQLSGGIIFDSAPARSSPVQLGWAVSFSSPPDDYVARWARLNYHITLLTMAGNEGG 194 (350)
T ss_pred EecCCceeehHHHHHHHhhcCchhHhhcCCceEeccccccchhhhcceeccccCchhhHHHHHhcCeEEEEEEeeecccc
Confidence 9999997655433 22 2 33 56677765433211100 0000 000000000000000
Q ss_pred HHHHHHHH-hhhhcccccccc-hhhhCCCCCCcEEEEEeCCCCCCChHHHHHHHHHcCC---CcEEEEeC-CCCC---CC
Q 013268 196 VQYMRRVI-QKKAKFDIMDLN-CLKLAPKTFIPALFGHASEDKFIRARHSDLIFNAYAG---DKNIIKFD-GDHN---SS 266 (446)
Q Consensus 196 ~~~~~~~~-~~~~~~~~~~~~-~~~~l~~i~~PvLii~G~~D~~vp~~~~~~l~~~l~~---~~~~~~~~-ggH~---~~ 266 (446)
...+.... .........-.+ ..........+.+.+.+..|.++|....+++.+.... ....+-+. +.|. -.
T Consensus 195 ~~~~~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~ly~~s~~d~v~~~~~ie~f~~~~~~~g~~v~s~~~~ds~H~~h~r~ 274 (350)
T KOG2521|consen 195 AYLLGPLAEKISMSRKYHFLDRYEEQRNELPWNQLYLYSDNDDVLPADEIEKFIALRREKGVNVKSVKFKDSEHVAHFRS 274 (350)
T ss_pred hhhhhhhhhccccccchHHHHHHHhhhhcccccceeecCCccccccHHHHHHHHHHHHhcCceEEEeeccCccceeeecc
Confidence 00000000 000000000000 0111112246788899999999999999888655442 22223333 3454 44
Q ss_pred ChhHHHHHHHHHHHhhcCCCC
Q 013268 267 RPQFYYDSVSIFFYNVLHPPQ 287 (446)
Q Consensus 267 ~~~~~~~~i~~Fl~~~L~~~~ 287 (446)
.|..+.+...+|++.......
T Consensus 275 ~p~~y~~~~~~Fl~~~~~~~~ 295 (350)
T KOG2521|consen 275 FPKTYLKKCSEFLRSVISSYN 295 (350)
T ss_pred CcHHHHHHHHHHHHhcccccC
Confidence 899999999999999876543
No 214
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=92.46 E-value=0.43 Score=47.30 Aligned_cols=105 Identities=21% Similarity=0.260 Sum_probs=79.2
Q ss_pred CCCCcEEEEECCCCCChhhH-HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCC----cchHHHHHHHHHHHHhcCCCCc
Q 013268 63 DTPLPCVVYCHGNSGCRADA-NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLG----WHEKDDLKVVVSYLRGNKQTSR 137 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~-~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~----~~~~~D~~~~i~~l~~~~~~~~ 137 (446)
+..+|+|++.-|++-..... ......| . -+-+.+++|-+|.|...+.... ++.+.|...+++.++..+ .++
T Consensus 60 ~~drPtV~~T~GY~~~~~p~r~Ept~Ll-d--~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY-~~k 135 (448)
T PF05576_consen 60 DFDRPTVLYTEGYNVSTSPRRSEPTQLL-D--GNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIY-PGK 135 (448)
T ss_pred CCCCCeEEEecCcccccCccccchhHhh-c--cceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhc-cCC
Confidence 35679999999998653222 2344444 2 3679999999999987765543 234788889999997765 468
Q ss_pred EEEEEechhHHHHHHHHHhCCC-ccEEEEeCCccC
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAFSD 171 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~~~ 171 (446)
.+-.|.|=||+.++.+=..+|+ |++.|...++.+
T Consensus 136 WISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP~~ 170 (448)
T PF05576_consen 136 WISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAPND 170 (448)
T ss_pred ceecCcCCCceeEEEEeeeCCCCCCeeeeeecccc
Confidence 9999999999999999999998 999998655543
No 215
>PLN02408 phospholipase A1
Probab=92.40 E-value=0.45 Score=46.90 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=25.8
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHh
Q 013268 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 121 D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~ 156 (446)
.+.+.+..+.+.+.. .+|.+.|||+||.+|..+|..
T Consensus 183 qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 183 MVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 444555555554443 369999999999999988875
No 216
>PLN00413 triacylglycerol lipase
Probab=91.98 E-value=0.25 Score=49.96 Aligned_cols=35 Identities=23% Similarity=0.324 Sum_probs=27.0
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 121 D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
.+...++.+.+..+..++.+.|||+||++|..+|.
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 34555555555556678999999999999998875
No 217
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=91.96 E-value=0.3 Score=48.18 Aligned_cols=89 Identities=16% Similarity=0.104 Sum_probs=50.7
Q ss_pred CCCCcEEEEECCCCC-ChhhHHHHHHHhccC--CcEEEEeCCCCCC-CCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcE
Q 013268 63 DTPLPCVVYCHGNSG-CRADANEAAVILLPS--NITLFTLDFSGSG-LSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRI 138 (446)
Q Consensus 63 ~~~~p~VVllHG~g~-~~~~~~~~~~~L~~~--Gy~Vi~~D~~G~G-~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i 138 (446)
.++.-.||+.||.-+ +..+|...+...... ++.++...+.|.- .+...-...++...+++.+.+.+. .+++|
T Consensus 77 ~k~~HLvVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~----si~kI 152 (405)
T KOG4372|consen 77 TKPKHLVVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDY----SIEKI 152 (405)
T ss_pred cCCceEEEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhcc----cccee
Confidence 356679999999988 566676666655544 4444444444321 111111122332233333333222 36899
Q ss_pred EEEEechhHHHHHHHHH
Q 013268 139 GLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 139 ~lvG~S~GG~ial~~a~ 155 (446)
-.+|||+||.++..+..
T Consensus 153 SfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 153 SFVGHSLGGLVARYAIG 169 (405)
T ss_pred eeeeeecCCeeeeEEEE
Confidence 99999999988765443
No 218
>PLN02162 triacylglycerol lipase
Probab=91.82 E-value=0.27 Score=49.69 Aligned_cols=35 Identities=17% Similarity=0.264 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 121 DLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 121 D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
.+.+.++.+..+.+..++++.|||+||.+|..+|.
T Consensus 263 ~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 263 TIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred HHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34444444444445578999999999999998765
No 219
>PLN02571 triacylglycerol lipase
Probab=91.74 E-value=0.25 Score=49.39 Aligned_cols=37 Identities=24% Similarity=0.299 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHh
Q 013268 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~ 156 (446)
+++...+..+.+.+.. -+|.+.|||+||.+|..+|..
T Consensus 208 ~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 208 DQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 4455555555554433 369999999999999998864
No 220
>PLN02934 triacylglycerol lipase
Probab=91.57 E-value=0.27 Score=50.15 Aligned_cols=36 Identities=14% Similarity=0.305 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
..+...++.+.+..+..++++.|||+||.+|..++.
T Consensus 305 ~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 345666666666666679999999999999999875
No 221
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=91.49 E-value=9.2 Score=43.16 Aligned_cols=94 Identities=19% Similarity=0.221 Sum_probs=60.2
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH-HHHHHHhcCCCCcEEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV-VVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~-~i~~l~~~~~~~~i~lvG 142 (446)
...|++.|+|..-|....+..++..+ ..|-+|.-.....+. ..++++++ .|+.+++.-+.++..++|
T Consensus 2121 se~~~~Ffv~pIEG~tt~l~~la~rl----------e~PaYglQ~T~~vP~--dSies~A~~yirqirkvQP~GPYrl~G 2188 (2376)
T KOG1202|consen 2121 SEEPPLFFVHPIEGFTTALESLASRL----------EIPAYGLQCTEAVPL--DSIESLAAYYIRQIRKVQPEGPYRLAG 2188 (2376)
T ss_pred ccCCceEEEeccccchHHHHHHHhhc----------CCcchhhhccccCCc--chHHHHHHHHHHHHHhcCCCCCeeeec
Confidence 46789999999988776666655444 223333322121111 22555443 456666665568999999
Q ss_pred echhHHHHHHHHHhCCC---ccEEEEeCCc
Q 013268 143 RSMGAVTSLLYGAEDPS---IAGMVLDSAF 169 (446)
Q Consensus 143 ~S~GG~ial~~a~~~p~---v~~lVl~sp~ 169 (446)
+|+|+.++..+|..-.+ ...+|++.+.
T Consensus 2189 YSyG~~l~f~ma~~Lqe~~~~~~lillDGs 2218 (2376)
T KOG1202|consen 2189 YSYGACLAFEMASQLQEQQSPAPLILLDGS 2218 (2376)
T ss_pred cchhHHHHHHHHHHHHhhcCCCcEEEecCc
Confidence 99999999998876432 5667776544
No 222
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=91.44 E-value=0.68 Score=40.94 Aligned_cols=51 Identities=18% Similarity=0.196 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcC-CCCcEEEEEechhHHHHHHHHHhCCC-ccEEEEeCCc
Q 013268 119 KDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMVLDSAF 169 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~-~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lVl~sp~ 169 (446)
..++...++-|+... ...++.++|||+|+.++-.++...+. +..+|+++.+
T Consensus 91 a~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSP 143 (177)
T PF06259_consen 91 APRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSP 143 (177)
T ss_pred HHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCC
Confidence 456677777776554 34789999999999999998877333 8777776543
No 223
>PLN02310 triacylglycerol lipase
Probab=90.98 E-value=0.29 Score=48.79 Aligned_cols=36 Identities=22% Similarity=0.232 Sum_probs=24.6
Q ss_pred HHHHHHHHHHhcC----CCCcEEEEEechhHHHHHHHHHh
Q 013268 121 DLKVVVSYLRGNK----QTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 121 D~~~~i~~l~~~~----~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
.+...+..+.+.+ ...+|.+.|||+||.+|+.+|..
T Consensus 190 qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~d 229 (405)
T PLN02310 190 QVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYE 229 (405)
T ss_pred HHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHH
Confidence 3444444444333 22579999999999999988854
No 224
>PLN03037 lipase class 3 family protein; Provisional
Probab=90.44 E-value=0.32 Score=49.71 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=18.6
Q ss_pred CcEEEEEechhHHHHHHHHHh
Q 013268 136 SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 136 ~~i~lvG~S~GG~ial~~a~~ 156 (446)
.+|.|.|||+||.+|+..|..
T Consensus 318 ~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 318 VSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred ceEEEeccCHHHHHHHHHHHH
Confidence 479999999999999988854
No 225
>PLN02324 triacylglycerol lipase
Probab=90.13 E-value=0.43 Score=47.66 Aligned_cols=37 Identities=27% Similarity=0.315 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHh
Q 013268 120 DDLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~ 156 (446)
+.+...+..+.+.+.. -+|.+.|||+||.+|+.+|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 4455555556555443 369999999999999998864
No 226
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=90.07 E-value=1.4 Score=43.08 Aligned_cols=78 Identities=17% Similarity=0.182 Sum_probs=51.1
Q ss_pred EEEEeCCC-CCCCCCCCCcCC-Cc--chHHHHHHHHHHHHhcCC---CCcEEEEEechhHHHHHHHHHh----C-----C
Q 013268 95 TLFTLDFS-GSGLSDGDYVSL-GW--HEKDDLKVVVSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAE----D-----P 158 (446)
Q Consensus 95 ~Vi~~D~~-G~G~S~~~~~~~-~~--~~~~D~~~~i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~----~-----p 158 (446)
+++-+|.| |.|.|-...... .. ..++|+..++..+.++.+ ..+++|.|-|+||..+-.+|.. + +
T Consensus 3 NvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~ 82 (319)
T PLN02213 3 NIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEP 82 (319)
T ss_pred cEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCC
Confidence 68999999 888886432211 11 124566555544443332 3789999999999876666553 2 2
Q ss_pred C--ccEEEEeCCccCH
Q 013268 159 S--IAGMVLDSAFSDL 172 (446)
Q Consensus 159 ~--v~~lVl~sp~~~~ 172 (446)
. ++|+++..|+.+.
T Consensus 83 ~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 83 PINLQGYMLGNPVTYM 98 (319)
T ss_pred ceeeeEEEeCCCCCCc
Confidence 2 8899998887764
No 227
>PLN02847 triacylglycerol lipase
Probab=89.77 E-value=0.93 Score=47.18 Aligned_cols=28 Identities=21% Similarity=0.177 Sum_probs=21.6
Q ss_pred HHhcCCCCcEEEEEechhHHHHHHHHHh
Q 013268 129 LRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 129 l~~~~~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
+....+.-+++++|||+||.+|..++..
T Consensus 244 al~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 244 ALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3334444689999999999999887764
No 228
>PLN02802 triacylglycerol lipase
Probab=89.20 E-value=0.55 Score=47.96 Aligned_cols=36 Identities=28% Similarity=0.262 Sum_probs=25.6
Q ss_pred HHHHHHHHHHhcCCC--CcEEEEEechhHHHHHHHHHh
Q 013268 121 DLKVVVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 121 D~~~~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~ 156 (446)
++.+.+..+.+.+.. .+|.+.|||+||.+|..+|..
T Consensus 313 qVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 313 SVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 444445555554433 379999999999999988765
No 229
>PLN02753 triacylglycerol lipase
Probab=88.78 E-value=0.64 Score=47.72 Aligned_cols=37 Identities=19% Similarity=0.270 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhcCC-----CCcEEEEEechhHHHHHHHHH
Q 013268 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~-----~~~i~lvG~S~GG~ial~~a~ 155 (446)
.+.+...++.+.+.+. .-+|.+.|||+||.+|..+|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 3445555555555442 258999999999999999885
No 230
>PLN02761 lipase class 3 family protein
Probab=88.78 E-value=0.6 Score=47.85 Aligned_cols=37 Identities=22% Similarity=0.217 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHhcCC------CCcEEEEEechhHHHHHHHHH
Q 013268 119 KDDLKVVVSYLRGNKQ------TSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~------~~~i~lvG~S~GG~ial~~a~ 155 (446)
.+++...|..+.+.+. .-+|.+.|||+||.+|..+|.
T Consensus 271 R~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 271 REQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 3455556666655541 247999999999999998885
No 231
>PLN02719 triacylglycerol lipase
Probab=88.55 E-value=0.64 Score=47.57 Aligned_cols=37 Identities=19% Similarity=0.223 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHhcCCC-----CcEEEEEechhHHHHHHHHHh
Q 013268 120 DDLKVVVSYLRGNKQT-----SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~-----~~i~lvG~S~GG~ial~~a~~ 156 (446)
+++...+..+.+.+.. .+|.+.|||+||.+|..+|..
T Consensus 277 eQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~D 318 (518)
T PLN02719 277 EQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYD 318 (518)
T ss_pred HHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHH
Confidence 4455555555554432 479999999999999998853
No 232
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=87.82 E-value=1.1 Score=42.11 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCc
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~ 169 (446)
.+..+++..+++.+...+|.+.|||+||.+|..+...+. +-.+...+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesPG 308 (425)
T KOG4540|consen 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCch
Confidence 345566666677777789999999999999998887765 4455544443
No 233
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=87.82 E-value=1.1 Score=42.11 Aligned_cols=49 Identities=20% Similarity=0.201 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccEEEEeCCc
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAGMVLDSAF 169 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~lVl~sp~ 169 (446)
.+..+++..+++.+...+|.+.|||+||.+|..+...+. +-.+...+|.
T Consensus 260 Sa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg-lP~VaFesPG 308 (425)
T COG5153 260 SAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG-LPVVAFESPG 308 (425)
T ss_pred HHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC-CceEEecCch
Confidence 345566666677777789999999999999998887765 4455544443
No 234
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=87.20 E-value=0.84 Score=44.92 Aligned_cols=37 Identities=19% Similarity=0.148 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHh
Q 013268 120 DDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 120 ~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
..+.+.++.|.+.+..-+|.+.|||+||.+|..+|..
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~ 191 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAALD 191 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHH
Confidence 5677777777777777889999999999999988875
No 235
>KOG4389 consensus Acetylcholinesterase/Butyrylcholinesterase [Signal transduction mechanisms]
Probab=85.54 E-value=1.1 Score=45.29 Aligned_cols=113 Identities=19% Similarity=0.269 Sum_probs=64.1
Q ss_pred EEEEEEecCCCCCCCCCcEEEEECCCCCC---hhhHHHHHHHhccC-CcEEEEeCCC----CC---CCCCCCCcCCCcch
Q 013268 50 LQCSHYMPSPFPEDTPLPCVVYCHGNSGC---RADANEAAVILLPS-NITLFTLDFS----GS---GLSDGDYVSLGWHE 118 (446)
Q Consensus 50 L~~~~~~P~~~~~~~~~p~VVllHG~g~~---~~~~~~~~~~L~~~-Gy~Vi~~D~~----G~---G~S~~~~~~~~~~~ 118 (446)
|+..+|.|.. ...+..++|++-|+|-- ..--..-.+.|+.. ...|+.++|| |+ +..+..+...+
T Consensus 121 LYlNVW~P~~--~p~n~tVlVWiyGGGF~sGt~SLdvYdGk~la~~envIvVs~NYRvG~FGFL~l~~~~eaPGNmG--- 195 (601)
T KOG4389|consen 121 LYLNVWAPAA--DPYNLTVLVWIYGGGFYSGTPSLDVYDGKFLAAVENVIVVSMNYRVGAFGFLYLPGHPEAPGNMG--- 195 (601)
T ss_pred eEEEEeccCC--CCCCceEEEEEEcCccccCCcceeeeccceeeeeccEEEEEeeeeeccceEEecCCCCCCCCccc---
Confidence 6667888852 33344588889888732 11111113455544 3556667776 11 11222222233
Q ss_pred HHHHHHHHHHHHhcCC-----CCcEEEEEechhHHHHHHHHHhCCC----ccEEEEeCC
Q 013268 119 KDDLKVVVSYLRGNKQ-----TSRIGLWGRSMGAVTSLLYGAEDPS----IAGMVLDSA 168 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~-----~~~i~lvG~S~GG~ial~~a~~~p~----v~~lVl~sp 168 (446)
.-|-.-++.|++++.. .++|.|+|-|.|+.-...-.. .|. ++..|+-++
T Consensus 196 l~DQqLAl~WV~~Ni~aFGGnp~~vTLFGESAGaASv~aHLl-sP~S~glF~raIlQSG 253 (601)
T KOG4389|consen 196 LLDQQLALQWVQENIAAFGGNPSRVTLFGESAGAASVVAHLL-SPGSRGLFHRAILQSG 253 (601)
T ss_pred hHHHHHHHHHHHHhHHHhCCCcceEEEeccccchhhhhheec-CCCchhhHHHHHhhcC
Confidence 4677778899988732 389999999999865433222 232 666666544
No 236
>PF06441 EHN: Epoxide hydrolase N terminus; InterPro: IPR010497 This entry represents the N-terminal region of the eukaryotic epoxide hydrolase protein. Epoxide hydrolases (3.3.2.3 from EC) comprise a group of functionally related enzymes that catalyse the addition of water to oxirane compounds (epoxides), thereby usually generating vicinal trans-diols. EHs have been found in all types of living organisms, including mammals, invertebrates, plants, fungi and bacteria. In animals, the major interest in EH is directed towards their detoxification capacity for epoxides since they are important safeguards against the cytotoxic and genotoxic potential of oxirane derivatives that are often reactive electrophiles because of the high tension of the three-membered ring system and the strong polarisation of the C--O bonds. This is of significant relevance because epoxides are frequent intermediary metabolites, which arise during the biotransformation of foreign compounds []. This domain is often found in conjunction with IPR000073 from INTERPRO.; GO: 0004301 epoxide hydrolase activity, 0009636 response to toxin, 0016020 membrane; PDB: 3G0I_B 3G02_A 1QO7_A.
Probab=85.01 E-value=1.6 Score=35.46 Aligned_cols=38 Identities=13% Similarity=0.110 Sum_probs=22.7
Q ss_pred CCCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChhhHHHH
Q 013268 44 NARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRADANEA 85 (446)
Q Consensus 44 ~~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~~~~~~ 85 (446)
..+|..|+..+..+ ......+||++||++|+--.|..+
T Consensus 74 ~I~g~~iHFih~rs----~~~~aiPLll~HGWPgSf~Ef~~v 111 (112)
T PF06441_consen 74 EIDGLDIHFIHVRS----KRPNAIPLLLLHGWPGSFLEFLKV 111 (112)
T ss_dssp EETTEEEEEEEE------S-TT-EEEEEE--SS--GGGGHHH
T ss_pred EEeeEEEEEEEeeC----CCCCCeEEEEECCCCccHHhHHhh
Confidence 35799999887765 335667899999999987666543
No 237
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=84.71 E-value=5.7 Score=37.89 Aligned_cols=91 Identities=20% Similarity=0.232 Sum_probs=53.5
Q ss_pred cEEEEECCCCCChh------hHHHHHHHh-ccCCcEEEEeCCCCCCC--------CCCC-----CcCCCcchHHHHHHHH
Q 013268 67 PCVVYCHGNSGCRA------DANEAAVIL-LPSNITLFTLDFSGSGL--------SDGD-----YVSLGWHEKDDLKVVV 126 (446)
Q Consensus 67 p~VVllHG~g~~~~------~~~~~~~~L-~~~Gy~Vi~~D~~G~G~--------S~~~-----~~~~~~~~~~D~~~~i 126 (446)
..||++-|.+.+.. +-..+.+.+ ...+-..+.+=.+|-|. +... ....++.....+..+.
T Consensus 2 ~iv~~fDGT~n~~~~~~~~TNV~rL~~~~~~~~~~~q~~~Y~~GvGt~~~~~~~~~~~~~~~~~~~a~g~g~~~~I~~ay 81 (277)
T PF09994_consen 2 RIVVFFDGTGNNPDNDPPPTNVARLYDAYKDRDGERQIVYYIPGVGTEFGSEFGESGRALDRLLGGAFGWGIEARIRDAY 81 (277)
T ss_pred cEEEEecCCCCCCCCCccccHHHHHHHHhhccCCCceeEEEecccccccccccccccchhhhccCchhhcchHHHHHHHH
Confidence 46777777764322 223344444 22232344444555555 1110 0111222356777888
Q ss_pred HHHHhcCCC-CcEEEEEechhHHHHHHHHHhC
Q 013268 127 SYLRGNKQT-SRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 127 ~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~ 157 (446)
.++.+.+.. ++|.++|+|-|+++|-.++..-
T Consensus 82 ~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~i 113 (277)
T PF09994_consen 82 RFLSKNYEPGDRIYLFGFSRGAYTARAFANMI 113 (277)
T ss_pred HHHHhccCCcceEEEEecCccHHHHHHHHHHH
Confidence 888776654 8899999999999998888654
No 238
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=83.51 E-value=5.4 Score=36.79 Aligned_cols=64 Identities=14% Similarity=0.134 Sum_probs=35.4
Q ss_pred CcEEEEeCCCCC-CCCCC-CCcCCCcchHHHHHHHHHHHHhcC-CCCcEEEEEechhHHHHHHHHHh
Q 013268 93 NITLFTLDFSGS-GLSDG-DYVSLGWHEKDDLKVVVSYLRGNK-QTSRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 93 Gy~Vi~~D~~G~-G~S~~-~~~~~~~~~~~D~~~~i~~l~~~~-~~~~i~lvG~S~GG~ial~~a~~ 156 (446)
|+.+..+++|.. +--.+ ....+.....+-+..+.+.++... ..++++++|+|+|+.++..++.+
T Consensus 2 ~~~~~~V~YPa~f~P~~g~~~~t~~~Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~ 68 (225)
T PF08237_consen 2 GYNVVAVDYPASFWPVTGIGSPTYDESVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRR 68 (225)
T ss_pred CcceEEecCCchhcCcCCCCCCccchHHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHH
Confidence 677888888852 11000 001111111233333344444432 33789999999999999877665
No 239
>PF03283 PAE: Pectinacetylesterase
Probab=82.44 E-value=5.7 Score=39.45 Aligned_cols=37 Identities=24% Similarity=0.255 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHhc-CCC-CcEEEEEechhHHHHHHHHH
Q 013268 119 KDDLKVVVSYLRGN-KQT-SRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 119 ~~D~~~~i~~l~~~-~~~-~~i~lvG~S~GG~ial~~a~ 155 (446)
...+.+++++|..+ .+. ++|+|.|.|.||.-++..+-
T Consensus 137 ~~i~~avl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d 175 (361)
T PF03283_consen 137 YRILRAVLDDLLSNGLPNAKQVLLTGCSAGGLGAILHAD 175 (361)
T ss_pred HHHHHHHHHHHHHhcCcccceEEEeccChHHHHHHHHHH
Confidence 56788999999887 333 89999999999998876543
No 240
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=82.26 E-value=9.5 Score=36.72 Aligned_cols=93 Identities=16% Similarity=0.089 Sum_probs=62.5
Q ss_pred CCCcEEEEECCCCCC-----hhhHHHHHHHhcc-CCcEEEEeCCCCCCCCCCCC--------------cCCCcchHHHHH
Q 013268 64 TPLPCVVYCHGNSGC-----RADANEAAVILLP-SNITLFTLDFSGSGLSDGDY--------------VSLGWHEKDDLK 123 (446)
Q Consensus 64 ~~~p~VVllHG~g~~-----~~~~~~~~~~L~~-~Gy~Vi~~D~~G~G~S~~~~--------------~~~~~~~~~D~~ 123 (446)
..+..|+.+-|.... ..+...+...|.. .+-+++++=-+|.|.-.-+. ..+++.-...+.
T Consensus 29 s~k~lV~CfDGT~nrfg~qp~TNVv~Ly~sl~r~d~~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg~gL~~nI~ 108 (423)
T COG3673 29 SMKRLVFCFDGTWNRFGAQPPTNVVLLYASLQRADGVTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFGQGLVQNIR 108 (423)
T ss_pred CcceEEEEecCchhhcCCCCcchHHHHHHHHhcCCCceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHHHHHHHHHH
Confidence 456677777776421 1233344555554 57888888888887542110 112223367788
Q ss_pred HHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHh
Q 013268 124 VVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 124 ~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~ 156 (446)
.+..+|..++.. ++|+++|+|-|+++|-.+|..
T Consensus 109 ~AYrFL~~~yepGD~Iy~FGFSRGAf~aRVlagm 142 (423)
T COG3673 109 EAYRFLIFNYEPGDEIYAFGFSRGAFSARVLAGM 142 (423)
T ss_pred HHHHHHHHhcCCCCeEEEeeccchhHHHHHHHHH
Confidence 899999988877 899999999999999888765
No 241
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=82.23 E-value=2 Score=44.31 Aligned_cols=63 Identities=14% Similarity=0.084 Sum_probs=48.4
Q ss_pred CCCcEEEEEeCCCCCCChHHHHHHHHHcC----C-------CcEEEEeCC-CCCCC----ChhHHHHHHHHHHHhhcCC
Q 013268 223 TFIPALFGHASEDKFIRARHSDLIFNAYA----G-------DKNIIKFDG-DHNSS----RPQFYYDSVSIFFYNVLHP 285 (446)
Q Consensus 223 i~~PvLii~G~~D~~vp~~~~~~l~~~l~----~-------~~~~~~~~g-gH~~~----~~~~~~~~i~~Fl~~~L~~ 285 (446)
---.+++.||..|.+|++..+...++++. . -.++.++|| +|+.- .+-.....|.+|+++-..+
T Consensus 352 ~GGKLI~~HG~aD~~I~p~~ti~YY~~V~~~~g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~WVE~G~AP 430 (474)
T PF07519_consen 352 RGGKLILYHGWADPLIPPQGTIDYYERVVARMGGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDWVENGKAP 430 (474)
T ss_pred cCCeEEEEecCCCCccCCCcHHHHHHHHHHhcccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHHHhCCCCC
Confidence 34689999999999999998888887643 1 236678899 99955 4457888999999975443
No 242
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=81.70 E-value=21 Score=34.46 Aligned_cols=132 Identities=18% Similarity=0.207 Sum_probs=79.2
Q ss_pred CCCcEEEEEEEecCCCCCCCCCcEEEEECCCCCChh----hHHHHH-----------HHhccCCcEEEEeCCC-CCCCCC
Q 013268 45 ARGHVLQCSHYMPSPFPEDTPLPCVVYCHGNSGCRA----DANEAA-----------VILLPSNITLFTLDFS-GSGLSD 108 (446)
Q Consensus 45 ~dG~~L~~~~~~P~~~~~~~~~p~VVllHG~g~~~~----~~~~~~-----------~~L~~~Gy~Vi~~D~~-G~G~S~ 108 (446)
.++..+.+++|..... ....+|..+++.|..+.+. .|.++. .+|.. ..++.+|-| |.|.|-
T Consensus 11 r~~a~~F~wly~~~~~-~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~~~~r~~TWlk~--adllfvDnPVGaGfSy 87 (414)
T KOG1283|consen 11 RTGAHMFWWLYYATAN-VKSERPLALWLQGGPGASSTGFGNFEELGPLDLDGSPRDWTWLKD--ADLLFVDNPVGAGFSY 87 (414)
T ss_pred ecCceEEEEEeeeccc-cccCCCeeEEecCCCCCCCcCccchhhcCCcccCCCcCCchhhhh--ccEEEecCCCcCceee
Confidence 4566777777754321 2256799999999976432 233221 13322 467777877 777774
Q ss_pred CCCcC-CCc---chHHHHHHHHHHHHhc-C--CCCcEEEEEechhHHHHHHHHHhC------C----CccEEEEeCCccC
Q 013268 109 GDYVS-LGW---HEKDDLKVVVSYLRGN-K--QTSRIGLWGRSMGAVTSLLYGAED------P----SIAGMVLDSAFSD 171 (446)
Q Consensus 109 ~~~~~-~~~---~~~~D~~~~i~~l~~~-~--~~~~i~lvG~S~GG~ial~~a~~~------p----~v~~lVl~sp~~~ 171 (446)
-+-.. +.. ....|+.+.++-+-.. . ...+++|+--|+||-+|..++... . ++.+++|-.++.+
T Consensus 88 Vdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWIS 167 (414)
T KOG1283|consen 88 VDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWIS 167 (414)
T ss_pred ecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccC
Confidence 22111 111 1144555555443332 2 237899999999999998877652 2 1678888888888
Q ss_pred HHHHHHHH
Q 013268 172 LFDLMLEL 179 (446)
Q Consensus 172 ~~~~~~~~ 179 (446)
..+.+..+
T Consensus 168 P~D~V~SW 175 (414)
T KOG1283|consen 168 PEDFVFSW 175 (414)
T ss_pred hhHhhhcc
Confidence 77765444
No 243
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=81.62 E-value=50 Score=31.55 Aligned_cols=61 Identities=8% Similarity=-0.009 Sum_probs=42.6
Q ss_pred CCcEEEEEeCCCCCCChHHH---HHHHHHcCCC-cEEEEeCC-CCCCC-----ChhHHHHHHHHHHHhhcC
Q 013268 224 FIPALFGHASEDKFIRARHS---DLIFNAYAGD-KNIIKFDG-DHNSS-----RPQFYYDSVSIFFYNVLH 284 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~---~~l~~~l~~~-~~~~~~~g-gH~~~-----~~~~~~~~i~~Fl~~~L~ 284 (446)
++-++-+-|++|.+....+. ..+...++.. +..++-++ ||+.. ..+++..+|.+|+.++-+
T Consensus 339 ~~aL~tvEGEnDDIsgvGQTkAA~~LC~nIpe~mk~hy~qp~vGHYGVFnGsrfr~eIvPri~dFI~~~d~ 409 (415)
T COG4553 339 NVALFTVEGENDDISGVGQTKAAHDLCSNIPEDMKQHYMQPDVGHYGVFNGSRFREEIVPRIRDFIRRYDR 409 (415)
T ss_pred ceeEEEeecccccccccchhHHHHHHHhcChHHHHHHhcCCCCCccceeccchHHHHHHHHHHHHHHHhCc
Confidence 46788999999998765544 4444445543 33445566 99854 457888899999998854
No 244
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=81.06 E-value=2.5 Score=37.74 Aligned_cols=59 Identities=12% Similarity=0.043 Sum_probs=43.2
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHc---CC-CcEEEEeCC-CCCCC-----ChhHHHHHHHHHHHhh
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAY---AG-DKNIIKFDG-DHNSS-----RPQFYYDSVSIFFYNV 282 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l---~~-~~~~~~~~g-gH~~~-----~~~~~~~~i~~Fl~~~ 282 (446)
++++|.|=|+.|.+..+.+++...+.+ +. .+..++.+| ||+.. ..++++..|.+|+.++
T Consensus 134 ~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi~~~ 202 (202)
T PF06850_consen 134 RTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFIRQH 202 (202)
T ss_pred cceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHHHhC
Confidence 468888999999999887766655554 43 344566677 99854 4568888888998753
No 245
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=76.11 E-value=7 Score=38.44 Aligned_cols=39 Identities=23% Similarity=0.158 Sum_probs=28.6
Q ss_pred CCCcEEEEEechhHHHHHHHHHhCC---C---ccEEEEeCCccCH
Q 013268 134 QTSRIGLWGRSMGAVTSLLYGAEDP---S---IAGMVLDSAFSDL 172 (446)
Q Consensus 134 ~~~~i~lvG~S~GG~ial~~a~~~p---~---v~~lVl~sp~~~~ 172 (446)
+..+|.|+|||+|+.+...++..-. . |.-+++++.+...
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPS 262 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCC
Confidence 4468999999999998876655422 1 7888888776543
No 246
>COG0529 CysC Adenylylsulfate kinase and related kinases [Inorganic ion transport and metabolism]
Probab=66.09 E-value=40 Score=29.83 Aligned_cols=38 Identities=21% Similarity=0.271 Sum_probs=30.6
Q ss_pred CCCcEEEEECCCCCChhhH--HHHHHHhccCCcEEEEeCC
Q 013268 64 TPLPCVVYCHGNSGCRADA--NEAAVILLPSNITLFTLDF 101 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~--~~~~~~L~~~Gy~Vi~~D~ 101 (446)
+.+|.+|++-|..|+.... ..+.+.|.++|++++..|-
T Consensus 20 ~~~~~viW~TGLSGsGKSTiA~ale~~L~~~G~~~y~LDG 59 (197)
T COG0529 20 GQKGAVIWFTGLSGSGKSTIANALEEKLFAKGYHVYLLDG 59 (197)
T ss_pred CCCCeEEEeecCCCCCHHHHHHHHHHHHHHcCCeEEEecC
Confidence 5678999999999875543 4566788889999999984
No 247
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=62.33 E-value=24 Score=34.39 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=43.5
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHcC------------C-----------C-cEEEEeCC-CCCCC-ChhHHHHHHHH
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAYA------------G-----------D-KNIIKFDG-DHNSS-RPQFYYDSVSI 277 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~------------~-----------~-~~~~~~~g-gH~~~-~~~~~~~~i~~ 277 (446)
.++|||..|..|.+++.-..+.+.+.+. + + -+++.+.+ ||..+ .|+...+.+..
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~~qP~~al~m~~~ 312 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 312 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCCcCHHHHHHHHHH
Confidence 4799999999999999988888887765 0 1 23334445 99876 78888888888
Q ss_pred HHHh
Q 013268 278 FFYN 281 (446)
Q Consensus 278 Fl~~ 281 (446)
|+..
T Consensus 313 fi~~ 316 (319)
T PLN02213 313 WISG 316 (319)
T ss_pred HHcC
Confidence 8754
No 248
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=57.20 E-value=23 Score=36.46 Aligned_cols=58 Identities=10% Similarity=0.045 Sum_probs=42.8
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHcC-----------------------------C-----CcEEEEeCC-CCCCC--
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAYA-----------------------------G-----DKNIIKFDG-DHNSS-- 266 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~-----------------------------~-----~~~~~~~~g-gH~~~-- 266 (446)
.++|||.+|..|.+++....+++.+.++ . ...++.+.+ ||..+
T Consensus 364 gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~V~~AGH~vp~d 443 (462)
T PTZ00472 364 GVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQVYNAGHMVPMD 443 (462)
T ss_pred CceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEEECCCCccChhh
Confidence 4899999999999999988777776553 0 122333445 89877
Q ss_pred ChhHHHHHHHHHHHh
Q 013268 267 RPQFYYDSVSIFFYN 281 (446)
Q Consensus 267 ~~~~~~~~i~~Fl~~ 281 (446)
.|+...+.+..|+..
T Consensus 444 ~P~~~~~~i~~fl~~ 458 (462)
T PTZ00472 444 QPAVALTMINRFLRN 458 (462)
T ss_pred HHHHHHHHHHHHHcC
Confidence 788888888888754
No 249
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=56.30 E-value=18 Score=36.25 Aligned_cols=57 Identities=14% Similarity=0.174 Sum_probs=41.3
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHcC-------------------------CCcEEEEeCC-CCCCC--ChhHHHHHH
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAYA-------------------------GDKNIIKFDG-DHNSS--RPQFYYDSV 275 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~-------------------------~~~~~~~~~g-gH~~~--~~~~~~~~i 275 (446)
.++|||.+|..|.+++.-..+...+.+. ..-+++.+.+ ||..+ .|+...+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 3899999999999999999999988754 0113455566 99977 788888888
Q ss_pred HHHHH
Q 013268 276 SIFFY 280 (446)
Q Consensus 276 ~~Fl~ 280 (446)
.+|+.
T Consensus 410 ~~fl~ 414 (415)
T PF00450_consen 410 RRFLK 414 (415)
T ss_dssp HHHHC
T ss_pred HHHhc
Confidence 88874
No 250
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=56.18 E-value=36 Score=34.77 Aligned_cols=58 Identities=9% Similarity=0.090 Sum_probs=44.1
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHcC------------C-----------C-cEEEEeCC-CCCCC-ChhHHHHHHHH
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAYA------------G-----------D-KNIIKFDG-DHNSS-RPQFYYDSVSI 277 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~------------~-----------~-~~~~~~~g-gH~~~-~~~~~~~~i~~ 277 (446)
.++|||..|..|.+++.-..+.+.+.++ + + -+++.+.+ ||..+ .|+...+.+..
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp~qP~~al~m~~~ 426 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAEYRPNETFIMFQR 426 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCCCCHHHHHHHHHH
Confidence 4799999999999999999888887764 0 1 23334444 99877 78888888888
Q ss_pred HHHh
Q 013268 278 FFYN 281 (446)
Q Consensus 278 Fl~~ 281 (446)
|+..
T Consensus 427 Fi~~ 430 (433)
T PLN03016 427 WISG 430 (433)
T ss_pred HHcC
Confidence 8854
No 251
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=54.80 E-value=47 Score=30.13 Aligned_cols=62 Identities=21% Similarity=0.239 Sum_probs=40.8
Q ss_pred CCCcEEEEECCCCCChhhHHHHHH-HhccCCc-EEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAV-ILLPSNI-TLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~-~L~~~Gy-~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 141 (446)
+...+|++.||...++.......+ .+.+.|| .|+....-|+ .++..+++++++. ++..+.|+
T Consensus 136 k~e~~vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y---------------P~~d~vi~~l~~~-~~~~v~L~ 199 (265)
T COG4822 136 KDEILVLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY---------------PLVDTVIEYLRKN-GIKEVHLI 199 (265)
T ss_pred cCeEEEEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC---------------CcHHHHHHHHHHc-CCceEEEe
Confidence 456789999999877665554444 4566788 6665554432 3567788999887 55555544
No 252
>PLN02209 serine carboxypeptidase
Probab=54.29 E-value=39 Score=34.54 Aligned_cols=58 Identities=9% Similarity=0.060 Sum_probs=44.1
Q ss_pred CCcEEEEEeCCCCCCChHHHHHHHHHcC-----------------------CC-cEEEEeC-CCCCCC-ChhHHHHHHHH
Q 013268 224 FIPALFGHASEDKFIRARHSDLIFNAYA-----------------------GD-KNIIKFD-GDHNSS-RPQFYYDSVSI 277 (446)
Q Consensus 224 ~~PvLii~G~~D~~vp~~~~~~l~~~l~-----------------------~~-~~~~~~~-ggH~~~-~~~~~~~~i~~ 277 (446)
.++||+..|..|.+++.-..+.+.+.++ ++ -+++.+. +||..+ .|++..+.+.+
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp~qP~~al~m~~~ 430 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAEYLPEESSIMFQR 430 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcCcCHHHHHHHHHH
Confidence 4799999999999999998888887764 01 2334444 499876 78888888888
Q ss_pred HHHh
Q 013268 278 FFYN 281 (446)
Q Consensus 278 Fl~~ 281 (446)
|+..
T Consensus 431 fi~~ 434 (437)
T PLN02209 431 WISG 434 (437)
T ss_pred HHcC
Confidence 8853
No 253
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=47.68 E-value=43 Score=34.33 Aligned_cols=58 Identities=10% Similarity=0.090 Sum_probs=42.8
Q ss_pred CcEEEEEeCCCCCCChHHHHHHHHHcC------------C------------CcEEEEeCC-CCCCC--ChhHHHHHHHH
Q 013268 225 IPALFGHASEDKFIRARHSDLIFNAYA------------G------------DKNIIKFDG-DHNSS--RPQFYYDSVSI 277 (446)
Q Consensus 225 ~PvLii~G~~D~~vp~~~~~~l~~~l~------------~------------~~~~~~~~g-gH~~~--~~~~~~~~i~~ 277 (446)
.+++|..|+.|.++|.-..+...+.+. + ...+..+.| ||..+ .|+.....+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 799999999999999998888766653 0 112244455 99877 67777788888
Q ss_pred HHHhh
Q 013268 278 FFYNV 282 (446)
Q Consensus 278 Fl~~~ 282 (446)
|+...
T Consensus 444 fl~g~ 448 (454)
T KOG1282|consen 444 FLNGQ 448 (454)
T ss_pred HHcCC
Confidence 88754
No 254
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=46.67 E-value=1.1e+02 Score=29.82 Aligned_cols=33 Identities=12% Similarity=0.001 Sum_probs=22.3
Q ss_pred HHHHHHHhcCCCC----cEEEEEechhHHHHHHHHHh
Q 013268 124 VVVSYLRGNKQTS----RIGLWGRSMGAVTSLLYGAE 156 (446)
Q Consensus 124 ~~i~~l~~~~~~~----~i~lvG~S~GG~ial~~a~~ 156 (446)
.+++.|.+..+.. -=.+.|.|+||.+|+.++..
T Consensus 16 ~vL~~le~~~g~~i~~~fD~i~GTStGgiIA~~la~g 52 (312)
T cd07212 16 QMLIAIEKALGRPIRELFDWIAGTSTGGILALALLHG 52 (312)
T ss_pred HHHHHHHHHhCCCchhhccEEEeeChHHHHHHHHHcC
Confidence 3455555543321 12689999999999999863
No 255
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=40.95 E-value=37 Score=35.63 Aligned_cols=49 Identities=18% Similarity=0.207 Sum_probs=31.3
Q ss_pred HHHHHHHHHhc-CC-CCcEEEEEechhHHHHHHHHHh-----CCC-------ccEEEEeCCcc
Q 013268 122 LKVVVSYLRGN-KQ-TSRIGLWGRSMGAVTSLLYGAE-----DPS-------IAGMVLDSAFS 170 (446)
Q Consensus 122 ~~~~i~~l~~~-~~-~~~i~lvG~S~GG~ial~~a~~-----~p~-------v~~lVl~sp~~ 170 (446)
...+++.+... .+ ..+|+.+||||||.++=.+... .|+ -+|+|+.+.+.
T Consensus 510 s~~lleql~~~~VG~~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PH 572 (697)
T KOG2029|consen 510 SNELLEQLQAAGVGDDRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPH 572 (697)
T ss_pred HHHHHHHHHHhccCCCCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCC
Confidence 34555555543 22 3689999999999888655443 232 56777766543
No 256
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=38.97 E-value=1.2e+02 Score=29.27 Aligned_cols=84 Identities=13% Similarity=0.078 Sum_probs=48.8
Q ss_pred HHHHhccCCcEEEEeCCCCCCCCCCCCc---CCCcchHHHHHHHHHHHHhcCCCC-cE-----EEEEec-----------
Q 013268 85 AAVILLPSNITLFTLDFSGSGLSDGDYV---SLGWHEKDDLKVVVSYLRGNKQTS-RI-----GLWGRS----------- 144 (446)
Q Consensus 85 ~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~---~~~~~~~~D~~~~i~~l~~~~~~~-~i-----~lvG~S----------- 144 (446)
.+..|.+.||.|+.+|-...|....... .+-..++.|-..+-+.+.++ .++ -| ..+|-|
T Consensus 16 tv~~Ll~~G~~vvV~DNL~~g~~~~v~~~~~~f~~gDi~D~~~L~~vf~~~-~idaViHFAa~~~VgESv~~Pl~Yy~NN 94 (329)
T COG1087 16 TVRQLLKTGHEVVVLDNLSNGHKIALLKLQFKFYEGDLLDRALLTAVFEEN-KIDAVVHFAASISVGESVQNPLKYYDNN 94 (329)
T ss_pred HHHHHHHCCCeEEEEecCCCCCHHHhhhccCceEEeccccHHHHHHHHHhc-CCCEEEECccccccchhhhCHHHHHhhc
Confidence 4667788999999999987665542221 11111244444444444443 332 22 345555
Q ss_pred hhHHHHHHHHHhCCCccEEEEeCCc
Q 013268 145 MGAVTSLLYGAEDPSIAGMVLDSAF 169 (446)
Q Consensus 145 ~GG~ial~~a~~~p~v~~lVl~sp~ 169 (446)
.+|.+.+.-+.+.-.|+.+|+.|..
T Consensus 95 v~gTl~Ll~am~~~gv~~~vFSStA 119 (329)
T COG1087 95 VVGTLNLIEAMLQTGVKKFIFSSTA 119 (329)
T ss_pred hHhHHHHHHHHHHhCCCEEEEecch
Confidence 3666666666666669999987654
No 257
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=38.87 E-value=73 Score=32.94 Aligned_cols=47 Identities=21% Similarity=0.101 Sum_probs=32.2
Q ss_pred HHHHhc-CCCCcEEEEEechhHHHHHHHHHh---CCC---ccEEEEeCCccCHH
Q 013268 127 SYLRGN-KQTSRIGLWGRSMGAVTSLLYGAE---DPS---IAGMVLDSAFSDLF 173 (446)
Q Consensus 127 ~~l~~~-~~~~~i~lvG~S~GG~ial~~a~~---~p~---v~~lVl~sp~~~~~ 173 (446)
+.|..+ .+..+|.|+|+|+|+-+....... ..+ |..+++++++....
T Consensus 437 e~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k 490 (633)
T KOG2385|consen 437 EALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTK 490 (633)
T ss_pred HHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCC
Confidence 344333 245899999999999988755442 222 78888888776543
No 258
>TIGR03709 PPK2_rel_1 polyphosphate:nucleotide phosphotransferase, PPK2 family. Members of this protein family belong to the polyphosphate kinase 2 (PPK2) family, which is not related in sequence to PPK1. While PPK1 tends to act in the biosynthesis of polyphosphate, or poly(P), members of the PPK2 family tend to use the terminal phosphate of poly(P) to regenerate ATP or GTP from the corresponding nucleoside diphosphate, or ADP from AMP as is the case with polyphosphate:AMP phosphotransferase (PAP). Members of this protein family most likely transfer the terminal phosphate between poly(P) and some nucleotide, but it is not clear which.
Probab=37.22 E-value=1.2e+02 Score=28.73 Aligned_cols=72 Identities=8% Similarity=0.068 Sum_probs=48.9
Q ss_pred CCCcEEEEECCCCCC--hhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEE
Q 013268 64 TPLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLW 141 (446)
Q Consensus 64 ~~~p~VVllHG~g~~--~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lv 141 (446)
+..|+||++.|+.++ ......+...|-.+|+.|.++.-|. +.. ..---+-.+-+..+..+.|+|+
T Consensus 53 ~~~~vlIv~eG~DaAGKG~~I~~l~~~lDPRg~~V~s~~~Pt----~eE---------~~~p~lWRfw~~lP~~G~i~IF 119 (264)
T TIGR03709 53 GRRSLLLVLQAMDAAGKDGTIRHVMSGVNPQGCQVTSFKAPS----AEE---------LDHDFLWRIHKALPERGEIGIF 119 (264)
T ss_pred CCCcEEEEEECCCCCCchHHHHHHHHhcCCCeeEEEeCCCCC----HHH---------HcCchHHHHHHhCCCCCeEEEE
Confidence 456999999999865 3445678899999999999997761 110 0011133455555566889998
Q ss_pred EechhHH
Q 013268 142 GRSMGAV 148 (446)
Q Consensus 142 G~S~GG~ 148 (446)
=.|+=+-
T Consensus 120 ~RSWY~~ 126 (264)
T TIGR03709 120 NRSHYED 126 (264)
T ss_pred cCccccc
Confidence 8886443
No 259
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=36.17 E-value=52 Score=28.58 Aligned_cols=35 Identities=23% Similarity=0.134 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-+++.|.++ +...-.+.|-|.|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 14 VGVAKALRER-GPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4466667665 4556689999999999999988654
No 260
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=35.78 E-value=80 Score=23.68 Aligned_cols=39 Identities=13% Similarity=0.179 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHhcCCC---CcEEEEEechhHHHHHHHHHhC
Q 013268 119 KDDLKVVVSYLRGNKQT---SRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 119 ~~D~~~~i~~l~~~~~~---~~i~lvG~S~GG~ial~~a~~~ 157 (446)
.+.+...++|++++... .++.++|-|-|=.+|.++++..
T Consensus 20 ~~~V~~qI~yvk~~~~~~GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 20 ARNVENQIEYVKSQGKINGPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp HHHHHHHHHHHHHC---TS-SEEEEES-SSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCCceEEEEecCCcccHHHHHHHHh
Confidence 57888899999886443 7899999999988888777664
No 261
>COG1856 Uncharacterized homolog of biotin synthetase [Function unknown]
Probab=35.04 E-value=84 Score=28.85 Aligned_cols=79 Identities=16% Similarity=0.088 Sum_probs=50.4
Q ss_pred HHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCC-CCcEEEEEechhHHH----HHHHHHhCCC
Q 013268 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ-TSRIGLWGRSMGAVT----SLLYGAEDPS 159 (446)
Q Consensus 85 ~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~-~~~i~lvG~S~GG~i----al~~a~~~p~ 159 (446)
.+++|...+..|+..|+-|-...-..-... ...++|+...+.+|.+..- +-+-+++|.+.|+.. |+.+...++
T Consensus 102 ~~eklk~~~vdvvsLDfvgDn~vIk~vy~l-~ksv~dyl~~l~~L~e~~irvvpHitiGL~~gki~~e~kaIdiL~~~~- 179 (275)
T COG1856 102 DLEKLKEELVDVVSLDFVGDNDVIKRVYKL-PKSVEDYLRSLLLLKENGIRVVPHITIGLDFGKIHGEFKAIDILVNYE- 179 (275)
T ss_pred HHHHHHHhcCcEEEEeecCChHHHHHHHcC-CccHHHHHHHHHHHHHcCceeceeEEEEeccCcccchHHHHHHHhcCC-
Confidence 345677778889999998643221111111 1237899999999987632 256789999999854 666666554
Q ss_pred ccEEEE
Q 013268 160 IAGMVL 165 (446)
Q Consensus 160 v~~lVl 165 (446)
.+++|+
T Consensus 180 ~DalVl 185 (275)
T COG1856 180 PDALVL 185 (275)
T ss_pred CCeEEE
Confidence 344444
No 262
>PRK12467 peptide synthase; Provisional
Probab=34.94 E-value=1.4e+02 Score=39.91 Aligned_cols=87 Identities=18% Similarity=0.131 Sum_probs=54.7
Q ss_pred CCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEec
Q 013268 65 PLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRS 144 (446)
Q Consensus 65 ~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S 144 (446)
..+.++..|+..+....+..+...+.. +..++.+..++.-... . ....+. +-.....++++......+..+.|+|
T Consensus 3691 ~~~~l~~~h~~~r~~~~~~~l~~~l~~-~~~~~~l~~~~~~~d~-~-~~~~~~--~~~~~y~~~~~~~~~~~p~~l~g~s 3765 (3956)
T PRK12467 3691 GFPALFCRHEGLGTVFDYEPLAVILEG-DRHVLGLTCRHLLDDG-W-QDTSLQ--AMAVQYADYILWQQAKGPYGLLGWS 3765 (3956)
T ss_pred cccceeeechhhcchhhhHHHHHHhCC-CCcEEEEecccccccc-C-CccchH--HHHHHHHHHHHHhccCCCeeeeeee
Confidence 456799999999887777777766644 5677887776542111 1 111111 1122233444443344678999999
Q ss_pred hhHHHHHHHHHh
Q 013268 145 MGAVTSLLYGAE 156 (446)
Q Consensus 145 ~GG~ial~~a~~ 156 (446)
+||.++..++..
T Consensus 3766 ~g~~~a~~~~~~ 3777 (3956)
T PRK12467 3766 LGGTLARLVAEL 3777 (3956)
T ss_pred cchHHHHHHHHH
Confidence 999999887765
No 263
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=34.87 E-value=59 Score=27.02 Aligned_cols=31 Identities=26% Similarity=0.233 Sum_probs=22.2
Q ss_pred CCCCcEEEEECCCCCChhhHH--HHHHHhccCC
Q 013268 63 DTPLPCVVYCHGNSGCRADAN--EAAVILLPSN 93 (446)
Q Consensus 63 ~~~~p~VVllHG~g~~~~~~~--~~~~~L~~~G 93 (446)
...+|.|+.+||+.|....+. -+++.|-..|
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~v~~liA~~ly~~G 81 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNFVSRLIAEHLYKSG 81 (127)
T ss_pred CCCCCEEEEeecCCCCcHHHHHHHHHHHHHhcc
Confidence 467899999999999877663 2455554444
No 264
>TIGR03707 PPK2_P_aer polyphosphate kinase 2, PA0141 family. Members of this protein family are designated polyphosphate kinase 2 (PPK2) after the characterized protein in Pseudomonas aeruginosa. This family comprises one of three well-separated clades in the larger family described by Pfam model pfam03976. PA0141 from this family has been shown capable of operating in reverse, with GDP preferred (over ADP) as a substrate, producing GTP (or ATP) by transfer of a phosphate residue from polyphosphate. Most species with a member of this family also encode a polyphosphate kinase 1 (PPK1).
Probab=34.59 E-value=1.7e+02 Score=27.10 Aligned_cols=72 Identities=14% Similarity=0.099 Sum_probs=49.5
Q ss_pred CCcEEEEECCCCCC--hhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEE
Q 013268 65 PLPCVVYCHGNSGC--RADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWG 142 (446)
Q Consensus 65 ~~p~VVllHG~g~~--~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG 142 (446)
+.|+||++.|+.++ ......+...|-.+|+.|.++.-|-.-+ ..---+-.+-+..+..+.|+|+=
T Consensus 29 ~~~vlIv~eG~DaAGKg~~I~~l~~~lDPRg~~v~~~~~pt~eE-------------~~~p~lwRfw~~lP~~G~i~IF~ 95 (230)
T TIGR03707 29 GARVVIVFEGRDAAGKGGTIKRITEHLNPRGARVVALPKPSDRE-------------RTQWYFQRYVQHLPAAGEIVLFD 95 (230)
T ss_pred CCCEEEEEeCCCCCCchHHHHHHHHhcCCCeeEEEeCCCCCHHH-------------HcChHHHHHHHhCCCCCeEEEEe
Confidence 46999999999865 3445678889999999999988772110 11112335555555668999998
Q ss_pred echhHHH
Q 013268 143 RSMGAVT 149 (446)
Q Consensus 143 ~S~GG~i 149 (446)
.|+=+-+
T Consensus 96 rSwY~~~ 102 (230)
T TIGR03707 96 RSWYNRA 102 (230)
T ss_pred CchhhhH
Confidence 8875543
No 265
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=34.53 E-value=2.3e+02 Score=22.37 Aligned_cols=82 Identities=12% Similarity=-0.015 Sum_probs=48.7
Q ss_pred HHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhH--HHHHHHHHhCCC
Q 013268 82 ANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGA--VTSLLYGAEDPS 159 (446)
Q Consensus 82 ~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG--~ial~~a~~~p~ 159 (446)
+..+.+.+..+||-.=.+.++..|.+-......+.. +-=...++.+.+.....+++++|-|--. -+-..+|.++|+
T Consensus 13 y~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~--~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~ 90 (100)
T PF09949_consen 13 YPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAE--EHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPG 90 (100)
T ss_pred HHHHHHHHHhcCCCCCceEcccCCccccccccCCch--hHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCC
Confidence 334455565667766666666665543322222211 1223445555566677899999999665 344556778898
Q ss_pred -ccEEEE
Q 013268 160 -IAGMVL 165 (446)
Q Consensus 160 -v~~lVl 165 (446)
|.++.+
T Consensus 91 ~i~ai~I 97 (100)
T PF09949_consen 91 RILAIYI 97 (100)
T ss_pred CEEEEEE
Confidence 777754
No 266
>PRK10279 hypothetical protein; Provisional
Probab=33.89 E-value=51 Score=31.85 Aligned_cols=34 Identities=18% Similarity=0.170 Sum_probs=26.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~ 157 (446)
.-+++.|.++ ++..-.+.|.|+|+.++..+|...
T Consensus 21 iGVL~aL~E~-gi~~d~i~GtS~GAlvga~yA~g~ 54 (300)
T PRK10279 21 IGVINALKKV-GIEIDIVAGCSIGSLVGAAYACDR 54 (300)
T ss_pred HHHHHHHHHc-CCCcCEEEEEcHHHHHHHHHHcCC
Confidence 4466777665 566678999999999999998754
No 267
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=33.29 E-value=57 Score=31.58 Aligned_cols=35 Identities=26% Similarity=0.222 Sum_probs=27.4
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-+++.|.++ ++..-.++|.|+|+.++..++...+
T Consensus 31 iGvL~aLee~-gi~~d~v~GtSaGAi~ga~ya~g~~ 65 (306)
T cd07225 31 IGVIKALEEA-GIPVDMVGGTSIGAFIGALYAEERN 65 (306)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCC
Confidence 4566777666 5656689999999999999998754
No 268
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=32.71 E-value=54 Score=31.19 Aligned_cols=86 Identities=13% Similarity=0.057 Sum_probs=44.9
Q ss_pred HHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHH----HHHHHHhcCCC--CcEEEEEechhHHHHHHHHHhCC
Q 013268 85 AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKV----VVSYLRGNKQT--SRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 85 ~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~----~i~~l~~~~~~--~~i~lvG~S~GG~ial~~a~~~p 158 (446)
-.+++..-+..++++-|..- -|--.+........+...+ +.+++...... .+++++|-|+|++-+..+-....
T Consensus 53 a~E~l~~GD~A~va~QYSyl-PSw~sfl~dr~~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~ 131 (289)
T PF10081_consen 53 ALEYLYGGDVAIVAMQYSYL-PSWLSFLVDRDAAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLD 131 (289)
T ss_pred HHHHHhCCCeEEEEeccccc-cchHHHhcccchHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHH
Confidence 34556554567777766421 1111110000011222333 33344443332 68999999999987765433322
Q ss_pred ----CccEEEEeCCccC
Q 013268 159 ----SIAGMVLDSAFSD 171 (446)
Q Consensus 159 ----~v~~lVl~sp~~~ 171 (446)
.+++++..+|+..
T Consensus 132 ~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 132 DLRDRVDGALWVGPPFF 148 (289)
T ss_pred HhhhhcceEEEeCCCCC
Confidence 2888888877653
No 269
>PF06792 UPF0261: Uncharacterised protein family (UPF0261); InterPro: IPR008322 The proteins in this entry are functionally uncharacterised.
Probab=32.02 E-value=4.9e+02 Score=26.29 Aligned_cols=93 Identities=6% Similarity=-0.092 Sum_probs=56.2
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcC----------CCcc------h----HH-HHHHH
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVS----------LGWH------E----KD-DLKVV 125 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~----------~~~~------~----~~-D~~~~ 125 (446)
|.|+++--+..-...+..+.+.+.+.|..|+.+|.-=.|........ .++. + ++ -...+
T Consensus 2 ~tI~iigT~DTK~~E~~yl~~~i~~~G~~v~~iDvg~~~~~~~~~di~~~eVa~~~g~~~~~~~~~~dRg~ai~~M~~ga 81 (403)
T PF06792_consen 2 KTIAIIGTLDTKGEELLYLRDQIEAQGVEVLLIDVGTLGEPSFPPDISREEVARAAGDSIEAVRSSGDRGEAIEAMARGA 81 (403)
T ss_pred CEEEEEEccCCCHHHHHHHHHHHHHCCCcEEEEEcCCCCCCCCCCCcCHHHHHHhcCCChHHhhccCCHHHHHHHHHHHH
Confidence 45566655555556677777888889999999998655544322110 0000 0 01 11223
Q ss_pred HHHHHhcCC---CCcEEEEEechhHHHHHHHHHhCCC
Q 013268 126 VSYLRGNKQ---TSRIGLWGRSMGAVTSLLYGAEDPS 159 (446)
Q Consensus 126 i~~l~~~~~---~~~i~lvG~S~GG~ial~~a~~~p~ 159 (446)
..++.+.+. +.-|+-+|-|.|..++..+...-|=
T Consensus 82 ~~~v~~l~~~g~i~Gvi~~GGs~GT~lat~aMr~LPi 118 (403)
T PF06792_consen 82 ARFVSDLYDEGKIDGVIGIGGSGGTALATAAMRALPI 118 (403)
T ss_pred HHHHHHHHhcCCccEEEEecCCccHHHHHHHHHhCCC
Confidence 334444433 4667888999999999988887774
No 270
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=31.06 E-value=69 Score=28.23 Aligned_cols=35 Identities=20% Similarity=0.138 Sum_probs=26.1
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
..+++.|.++ +...=.++|-|.||.++..++....
T Consensus 15 ~Gvl~~L~e~-~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 15 IGALKALEEA-GILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHHHHHc-CCCcceEEEECHHHHHHHHHHcCCC
Confidence 4566666655 4445689999999999999987543
No 271
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=29.85 E-value=82 Score=28.84 Aligned_cols=35 Identities=17% Similarity=0.103 Sum_probs=25.7
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
..+++.|.+. +...-.++|-|.|+.++..++...+
T Consensus 16 ~GvL~aL~e~-gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 16 LGFLAALLEM-GLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHHHHHHc-CCCceEEEEeCHHHHHHHHHHcCCC
Confidence 3456666555 4555579999999999999986543
No 272
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=29.40 E-value=66 Score=30.43 Aligned_cols=29 Identities=17% Similarity=0.109 Sum_probs=21.4
Q ss_pred HHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 127 ~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
+.+++..++.+-.++|||+|=+.|+.++.
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 34444433788899999999998888763
No 273
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=29.23 E-value=68 Score=30.51 Aligned_cols=29 Identities=14% Similarity=0.196 Sum_probs=21.6
Q ss_pred HHHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 126 VSYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 126 i~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
.+.+++ .++.+-.++|||+|-+.|+.++.
T Consensus 73 ~~~l~~-~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRS-WGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHH-cCCcccEEEecCHHHHHHHHHhC
Confidence 344443 36778899999999999887653
No 274
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=28.55 E-value=1.8e+02 Score=29.37 Aligned_cols=104 Identities=16% Similarity=0.109 Sum_probs=63.0
Q ss_pred CCCcEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC---CcEEE
Q 013268 64 TPLPCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT---SRIGL 140 (446)
Q Consensus 64 ~~~p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~---~~i~l 140 (446)
....+|+++--..+....-...++.+...|+-|+-.|..++-.--+.........+.|+....+++...... ..-+|
T Consensus 46 ~~~~~villSd~~G~~d~~~s~a~al~~~~Alv~~vd~~~ylaaL~~dd~ecvylisd~Ealsr~~Qr~a~~g~yr~PVl 125 (456)
T COG3946 46 DPQGLVILLSDEAGIGDQERSRADALLARGALVAPVDLGAYLAALGADDNECVYLISDFEALSREAQRAADLGVYRLPVL 125 (456)
T ss_pred CcceeeEEEEcccChhhhhcchhHHHhhcCCeeeccccchhhhccccCCCcceEEehhHHHHhHHHHHHhhccCcccceE
Confidence 344455555444444444455677888889999999998764332222222222255665555555433221 33467
Q ss_pred EEechhHHHHHHHHHhCCC--ccEEEEeC
Q 013268 141 WGRSMGAVTSLLYGAEDPS--IAGMVLDS 167 (446)
Q Consensus 141 vG~S~GG~ial~~a~~~p~--v~~lVl~s 167 (446)
.|---||.++...+++.|. +.+.+...
T Consensus 126 ~g~g~Gg~~A~asaaqSp~atlag~Vsld 154 (456)
T COG3946 126 TGPGQGGTLAYASAAQSPDATLAGAVSLD 154 (456)
T ss_pred eecCCCcHHHHHHHhhChhhhhcCccCCC
Confidence 8899999999999998876 56555543
No 275
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=28.08 E-value=29 Score=29.96 Aligned_cols=50 Identities=20% Similarity=0.240 Sum_probs=29.0
Q ss_pred eCCCCCCCCCCCCcCCCcchHHHHHHHH----HHHHhcCC----CCcEEEEEechhHH
Q 013268 99 LDFSGSGLSDGDYVSLGWHEKDDLKVVV----SYLRGNKQ----TSRIGLWGRSMGAV 148 (446)
Q Consensus 99 ~D~~G~G~S~~~~~~~~~~~~~D~~~~i----~~l~~~~~----~~~i~lvG~S~GG~ 148 (446)
+-+-|||........++....+.+...+ ..+.+... .++|.|+|-|++..
T Consensus 59 w~lVGHG~~~~~~~~l~g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 59 WQLVGHGRDEFNNQTLAGYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp EEEE--EESSTSSSEETTEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred EEEEEeCCCcCCCceeCCCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 3345777663333333334477777777 67766543 37899999999877
No 276
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=26.60 E-value=84 Score=29.83 Aligned_cols=35 Identities=20% Similarity=0.210 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-+++.|.+. ++..=.+.|.|+|+.++..+|....
T Consensus 26 iGVL~aLeE~-gi~~d~v~GtSaGAiiga~ya~g~~ 60 (269)
T cd07227 26 IGILQALEEA-GIPIDAIGGTSIGSFVGGLYAREAD 60 (269)
T ss_pred HHHHHHHHHc-CCCccEEEEECHHHHHHHHHHcCCc
Confidence 4466677655 5555589999999999999997643
No 277
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=26.52 E-value=47 Score=32.19 Aligned_cols=29 Identities=21% Similarity=0.289 Sum_probs=21.8
Q ss_pred HHHHHHhcCCCCcEEEEEechhHHHHHHHH
Q 013268 125 VVSYLRGNKQTSRIGLWGRSMGAVTSLLYG 154 (446)
Q Consensus 125 ~i~~l~~~~~~~~i~lvG~S~GG~ial~~a 154 (446)
+.+.+++. ++.+-.++|||+|=+.|+.++
T Consensus 74 l~~~l~~~-Gi~P~~v~GhSlGE~aA~~aa 102 (318)
T PF00698_consen 74 LARLLRSW-GIKPDAVIGHSLGEYAALVAA 102 (318)
T ss_dssp HHHHHHHT-THCESEEEESTTHHHHHHHHT
T ss_pred hhhhhccc-ccccceeeccchhhHHHHHHC
Confidence 34455443 678889999999999888765
No 278
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=26.17 E-value=86 Score=29.89 Aligned_cols=28 Identities=14% Similarity=0.092 Sum_probs=21.0
Q ss_pred HHHHhcCCCCcEEEEEechhHHHHHHHHH
Q 013268 127 SYLRGNKQTSRIGLWGRSMGAVTSLLYGA 155 (446)
Q Consensus 127 ~~l~~~~~~~~i~lvG~S~GG~ial~~a~ 155 (446)
+.+++. ++.+..++|||+|=+.|+.++.
T Consensus 68 ~~l~~~-g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 68 RALLAL-LPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHhc-CCCCcEEeecCHHHHHHHHHhC
Confidence 334333 5688899999999998887763
No 279
>TIGR02873 spore_ylxY probable sporulation protein, polysaccharide deacetylase family. Members of this protein family are most closely related to TIGR02764, a subset of polysaccharide deacetylase family proteins found in a species if and only if the species forms endospores like those of Bacillus subtilis or Clostridium tetani. This family is likewise restricted to spore-formers, but is not universal among them in having sequences with full-length matches to the model.
Probab=26.11 E-value=70 Score=30.30 Aligned_cols=34 Identities=15% Similarity=0.180 Sum_probs=27.7
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeC
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLD 100 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D 100 (446)
..||++|....+......++..|.++||.++.++
T Consensus 231 G~IILmHd~~~T~~aL~~iI~~Lk~kGy~fvtl~ 264 (268)
T TIGR02873 231 GAMVLMHPTASSTEGLEEMITIIKEKGYKIGTIT 264 (268)
T ss_pred CcEEEEcCCccHHHHHHHHHHHHHHCCCEEEeHH
Confidence 4688999876666677788899999999998764
No 280
>PRK02399 hypothetical protein; Provisional
Probab=24.98 E-value=7.3e+02 Score=25.10 Aligned_cols=98 Identities=11% Similarity=0.060 Sum_probs=53.9
Q ss_pred cEEEEECCCCCChhhHHHHHHHhccCCcEEEEeCCCCCCCCCCCCc----------CCCc-------ch---HHH-HHHH
Q 013268 67 PCVVYCHGNSGCRADANEAAVILLPSNITLFTLDFSGSGLSDGDYV----------SLGW-------HE---KDD-LKVV 125 (446)
Q Consensus 67 p~VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~----------~~~~-------~~---~~D-~~~~ 125 (446)
+.|+++--+..-...+..+.+.+.++|..|+.+|.-..|....... ...+ .. ++- ...+
T Consensus 4 ~~I~iigT~DTK~~E~~yl~~~i~~~g~~v~~iDv~~~~~p~~~~dis~~~Va~~~g~~~~~~~~~~dRg~ai~~M~~ga 83 (406)
T PRK02399 4 KRIYIAGTLDTKGEELAYVKDLIEAAGLEVVTVDVSGLGEPPFEPDISAEEVAEAAGDGIEAVFCGGDRGSAMAAMAEGA 83 (406)
T ss_pred CEEEEEeccCCcHHHHHHHHHHHHHCCCceEEEecCCCCCCCCCCCCCHHHHHHHcCCCHHHhhcCccHHHHHHHHHHHH
Confidence 4455554444444455666677777799999999854442211100 0000 00 111 1122
Q ss_pred HHHHH---hcCCCCcEEEEEechhHHHHHHHHHhCCC-ccEEE
Q 013268 126 VSYLR---GNKQTSRIGLWGRSMGAVTSLLYGAEDPS-IAGMV 164 (446)
Q Consensus 126 i~~l~---~~~~~~~i~lvG~S~GG~ial~~a~~~p~-v~~lV 164 (446)
..++. ++..+.-|+-+|-|+|..++..+...-|- +-+++
T Consensus 84 ~~~v~~L~~~g~i~gviglGGs~GT~lat~aMr~LPiG~PKlm 126 (406)
T PRK02399 84 AAFVRELYERGDVAGVIGLGGSGGTALATPAMRALPIGVPKLM 126 (406)
T ss_pred HHHHHHHHhcCCccEEEEecCcchHHHHHHHHHhCCCCCCeEE
Confidence 22333 23345678889999999999988887774 43333
No 281
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=24.96 E-value=1.1e+02 Score=26.50 Aligned_cols=35 Identities=26% Similarity=0.212 Sum_probs=25.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-+++.+.++ +...=.+.|.|.|+.++..++...+
T Consensus 16 ~Gvl~~L~e~-g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 16 IGVLRALEEE-GIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHHHHHHC-CCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 3455666555 4455689999999999999887654
No 282
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=24.85 E-value=92 Score=30.02 Aligned_cols=34 Identities=26% Similarity=0.215 Sum_probs=26.2
Q ss_pred HHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 124 VVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 124 ~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
-+++.|.+. ++..-.|.|-|+|+.++..+|....
T Consensus 28 GVl~aL~e~-gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEA-GIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHc-CCCccEEEecCHHHHHHHHHHcCCC
Confidence 355555555 5677789999999999999998643
No 283
>TIGR02764 spore_ybaN_pdaB polysaccharide deacetylase family sporulation protein PdaB. This model describes the YbaN protein family, also called PdaB and SpoVIE, of Gram-positive bacteria. Although ybaN null mutants have only a mild sporulation defect, ybaN/ytrI double mutants show drastically reducted sporulation efficiencies. This synthetic defect suggests the role of this sigmaE-controlled gene in sporulation had been masked by functional redundancy. Members of this family are homologous to a characterized polysaccharide deacetylase; the exact function this protein family is unknown.
Probab=24.41 E-value=56 Score=28.92 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=24.2
Q ss_pred cEEEEECCCC---CChhhHHHHHHHhccCCcEEEEeC
Q 013268 67 PCVVYCHGNS---GCRADANEAAVILLPSNITLFTLD 100 (446)
Q Consensus 67 p~VVllHG~g---~~~~~~~~~~~~L~~~Gy~Vi~~D 100 (446)
..||++|... .+......++..|.++||.++.++
T Consensus 152 g~Iil~Hd~~~~~~t~~~l~~~i~~l~~~Gy~~vtl~ 188 (191)
T TIGR02764 152 GDIILLHASDSAKQTVKALPTIIKKLKEKGYEFVTIS 188 (191)
T ss_pred CCEEEEeCCCCcHhHHHHHHHHHHHHHHCCCEEEEHH
Confidence 3588899432 234456677888999999988764
No 284
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=24.37 E-value=1e+02 Score=27.96 Aligned_cols=35 Identities=26% Similarity=0.281 Sum_probs=26.5
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-+++.|.+. +...-.+.|.|.|+.++..++...+
T Consensus 14 ~Gvl~aL~e~-g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 14 AGVLKALAEA-GIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHHHHHc-CCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3456666665 4445589999999999999998765
No 285
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=22.68 E-value=1.2e+02 Score=27.08 Aligned_cols=64 Identities=16% Similarity=0.228 Sum_probs=39.2
Q ss_pred CCcEEEEECCCCCC---hhhHHHHHHHhccCCcEEEEeCCCC--CCCCCCCCcCCCcchHHHHHHHHHHHHhcCC
Q 013268 65 PLPCVVYCHGNSGC---RADANEAAVILLPSNITLFTLDFSG--SGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQ 134 (446)
Q Consensus 65 ~~p~VVllHG~g~~---~~~~~~~~~~L~~~Gy~Vi~~D~~G--~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~ 134 (446)
..++++++||.... ...-..+...|.+.|..+...-+++ ||..... ...+-...+++|+.+.++
T Consensus 143 ~~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~~~~~~~~p~~gH~~~~~~------~~~~~~~~~~~f~~~~l~ 211 (213)
T PF00326_consen 143 IKPPVLIIHGENDPRVPPSQSLRLYNALRKAGKPVELLIFPGEGHGFGNPE------NRRDWYERILDFFDKYLK 211 (213)
T ss_dssp GGSEEEEEEETTBSSSTTHHHHHHHHHHHHTTSSEEEEEETT-SSSTTSHH------HHHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEccCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCcCCCCCCCch------hHHHHHHHHHHHHHHHcC
Confidence 56899999998753 3344566777878776665555554 4333211 113556677788876643
No 286
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=22.67 E-value=1.2e+02 Score=27.99 Aligned_cols=35 Identities=20% Similarity=0.088 Sum_probs=26.7
Q ss_pred HHHHHHHHhcCCCC--cEEEEEechhHHHHHHHHHhCC
Q 013268 123 KVVVSYLRGNKQTS--RIGLWGRSMGAVTSLLYGAEDP 158 (446)
Q Consensus 123 ~~~i~~l~~~~~~~--~i~lvG~S~GG~ial~~a~~~p 158 (446)
.-++++|.++ ++. .-.+.|-|.|+.++..++...+
T Consensus 15 ~GVl~~L~e~-gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLLIEA-GVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHHHc-CCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 4567777776 342 4479999999999999987654
No 287
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=22.53 E-value=1.4e+02 Score=25.88 Aligned_cols=34 Identities=26% Similarity=0.177 Sum_probs=24.8
Q ss_pred HHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhC
Q 013268 123 KVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAED 157 (446)
Q Consensus 123 ~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~ 157 (446)
..++++|.++ +...-.+.|.|.|+.++..++...
T Consensus 16 ~Gvl~~L~~~-~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 16 IGVLKALEEA-GIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHHHHHHc-CCCeeEEEEECHHHHHHHHHHcCC
Confidence 4456666655 344458999999999999988653
No 288
>TIGR02884 spore_pdaA delta-lactam-biosynthetic de-N-acetylase. Muramic delta-lactam is an unusual constituent of peptidoglycan, found only in bacterial spores in the peptidoglycan wall, or spore cortex. The proteins in this family are PdaA (yfjS), a member of a larger family of polysaccharide deacetylases, and are specificially involved in delta-lactam biosynthesis. PdaA acts immediately after CwlD, an N-acetylmuramoyl-L-alanine amidase and performs a de-N-acetylation. PdaA may also perform the following transpeptidation for lactam ring formation, as heterologous expression in E. coli of CwlD and PdaA together is sufficient for delta-lactam production.
Probab=21.79 E-value=1e+02 Score=28.21 Aligned_cols=35 Identities=17% Similarity=0.114 Sum_probs=26.8
Q ss_pred CcEEEEECCCC-CChhhHHHHHHHhccCCcEEEEeC
Q 013268 66 LPCVVYCHGNS-GCRADANEAAVILLPSNITLFTLD 100 (446)
Q Consensus 66 ~p~VVllHG~g-~~~~~~~~~~~~L~~~Gy~Vi~~D 100 (446)
...||++|... .+......++..|.++||.++.++
T Consensus 186 ~g~IiLlHd~~~~t~~aL~~ii~~lk~~Gy~fvtl~ 221 (224)
T TIGR02884 186 PGAILLLHAVSKDNAEALDKIIKDLKEQGYTFKSLD 221 (224)
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEhH
Confidence 34688889753 445567788899999999998874
No 289
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=21.75 E-value=6.6e+02 Score=23.77 Aligned_cols=63 Identities=13% Similarity=0.194 Sum_probs=37.2
Q ss_pred CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEE-EEEechhHHHHHHHHHhCCC--ccEEEE
Q 013268 92 SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIG-LWGRSMGAVTSLLYGAEDPS--IAGMVL 165 (446)
Q Consensus 92 ~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~-lvG~S~GG~ial~~a~~~p~--v~~lVl 165 (446)
.++.++.+|-+|....+ .+.+.++.+.+... ....++ ++.-++++.-+...+..+.. ++++|+
T Consensus 153 ~~~D~ViIDt~Gr~~~~----------~~~l~el~~~~~~~-~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 153 ARVDYILIDTAGKNYRA----------SETVEEMIETMGQV-EPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred CCCCEEEEECCCCCcCC----------HHHHHHHHHHHhhh-CCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 36899999999765332 23333333333322 223344 44456777777777776554 888887
No 290
>TIGR01118 lacA galactose-6-phosphate isomerase, LacA subunit. This family contains members from low GC gram-positive bacteria. Galactose-6-phosphate isomerase is involved in lactose catabolism by the tagatose-6-phosphate pathway.
Probab=21.71 E-value=2.4e+02 Score=23.92 Aligned_cols=73 Identities=12% Similarity=0.107 Sum_probs=41.1
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCccE
Q 013268 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSIAG 162 (446)
Q Consensus 83 ~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v~~ 162 (446)
..+..+|.++||.|+ |+ |.+.+ . .+ .+-...+.+.+.+.....-|.+.|.-.|-.++ |.+.|.|++
T Consensus 16 ~~i~~~L~~~G~eV~--D~-G~~~~----~--dY--pd~a~~va~~V~~~e~~~GIliCGtGiG~sia---ANK~~GIRA 81 (141)
T TIGR01118 16 DVIKNFLVDNGFEVI--DV-TEGDG----Q--DF--VDVTLAVASEVQKDEQNLGIVIDAYGAGSFMV---ATKIKGMIA 81 (141)
T ss_pred HHHHHHHHHCCCEEE--Ec-CCCCC----C--Cc--HHHHHHHHHHHHcCCCceEEEEcCCCHhHhhh---hhcCCCeEE
Confidence 346788888999885 43 22111 1 11 23334444555443222446777777665554 567777888
Q ss_pred EEEeCCc
Q 013268 163 MVLDSAF 169 (446)
Q Consensus 163 lVl~sp~ 169 (446)
.+...+.
T Consensus 82 A~~~d~~ 88 (141)
T TIGR01118 82 AEVSDER 88 (141)
T ss_pred EEECCHH
Confidence 7765543
No 291
>PRK13256 thiopurine S-methyltransferase; Reviewed
Probab=21.55 E-value=81 Score=29.07 Aligned_cols=29 Identities=10% Similarity=0.178 Sum_probs=21.3
Q ss_pred EEEECCCCCChhhHHHHHHHhccCCcEEEEeCCC
Q 013268 69 VVYCHGNSGCRADANEAAVILLPSNITLFTLDFS 102 (446)
Q Consensus 69 VVllHG~g~~~~~~~~~~~~L~~~Gy~Vi~~D~~ 102 (446)
=|++.|-|.+.. +.+|+++||.|+.+|+.
T Consensus 46 rvLvPgCGkg~D-----~~~LA~~G~~V~GvDlS 74 (226)
T PRK13256 46 VCLIPMCGCSID-----MLFFLSKGVKVIGIELS 74 (226)
T ss_pred eEEEeCCCChHH-----HHHHHhCCCcEEEEecC
Confidence 455666655433 45888999999999996
No 292
>PTZ00215 ribose 5-phosphate isomerase; Provisional
Probab=20.94 E-value=5.1e+02 Score=22.20 Aligned_cols=75 Identities=12% Similarity=0.129 Sum_probs=41.1
Q ss_pred HHHHHHhcc--CCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHHHHHHHHHhCCCc
Q 013268 83 NEAAVILLP--SNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAVTSLLYGAEDPSI 160 (446)
Q Consensus 83 ~~~~~~L~~--~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ial~~a~~~p~v 160 (446)
..+..+|.+ +||.|+=+- ....+.. .+ .+-...+.+.+.+.....-|.+.|..+|-.++ |.+.|.|
T Consensus 18 ~~l~~~L~~~~~g~eV~D~G-----~~~~~~~--dY--p~~a~~va~~V~~~~~~~GIliCGtGiG~sia---ANK~~GI 85 (151)
T PTZ00215 18 NEIIDYIKNKGKEYKIEDMG-----TYTAESV--DY--PDFAEKVCEEVLKGEADTGILVCGSGIGISIA---ANKVKGI 85 (151)
T ss_pred HHHHHHHHhccCCCEEEEcC-----CCCCCCC--CH--HHHHHHHHHHHhcCCCcEEEEEcCCcHHHHHH---HhcCCCe
Confidence 346788888 899886432 1111111 11 23334444555443222346677776665554 5677888
Q ss_pred cEEEEeCCc
Q 013268 161 AGMVLDSAF 169 (446)
Q Consensus 161 ~~lVl~sp~ 169 (446)
++.+...+.
T Consensus 86 RAa~~~d~~ 94 (151)
T PTZ00215 86 RCALCHDHY 94 (151)
T ss_pred EEEEECCHH
Confidence 887765543
No 293
>TIGR00689 rpiB_lacA_lacB sugar-phosphate isomerases, RpiB/LacA/LacB family. Proteins of known function in this family act as sugar (pentose and/or hexose)-phosphate isomerases, including the LacA and LacB subunits of galactose-6-phosphate isomerases from Gram-positive bacteria and RpiB. RpiB is the second ribose phosphate isomerase of E. coli. It lacks homology to RpiA, its inducer is unknown (but is not ribose), and it can be replaced by the homologous galactose-6-phosphate isomerase of Streptococcus mutans, all of which suggests that the ribose phosphate isomerase activity of RpiB is a secondary function. On the other hand, there appear to be a significant number of species which contain rpiB, lack rpiA and seem to require rpi activity in order to copplete the pentose phosphate pathway.
Probab=20.89 E-value=5.2e+02 Score=21.93 Aligned_cols=74 Identities=14% Similarity=0.123 Sum_probs=39.0
Q ss_pred HHHHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCC-CcEEEEEechhHHHHHHHHHhCCCcc
Q 013268 83 NEAAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQT-SRIGLWGRSMGAVTSLLYGAEDPSIA 161 (446)
Q Consensus 83 ~~~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~-~~i~lvG~S~GG~ial~~a~~~p~v~ 161 (446)
..+..+|.++||.|+=+-- ...+.. .+ .+-...+.+.+.+. .. .-|.+.|...|-.++ |.+.|.|+
T Consensus 14 ~~l~~~L~~~g~eV~D~G~-----~~~~~~--dY--pd~a~~va~~V~~g-~~~~GIliCGtGiG~sia---ANK~~GIr 80 (144)
T TIGR00689 14 SEIIEHLKQKGHEVIDCGT-----LYDERV--DY--PDYAKLVADKVVAG-EVSLGILICGTGIGMSIA---ANKFKGIR 80 (144)
T ss_pred HHHHHHHHHCCCEEEEcCC-----CCCCCC--Ch--HHHHHHHHHHHHcC-CCceEEEEcCCcHHHHHH---HhcCCCeE
Confidence 3467888889998854321 111111 11 23333344444433 33 335566665554443 56788888
Q ss_pred EEEEeCCc
Q 013268 162 GMVLDSAF 169 (446)
Q Consensus 162 ~lVl~sp~ 169 (446)
+.+...+.
T Consensus 81 aa~~~d~~ 88 (144)
T TIGR00689 81 AALCVDEY 88 (144)
T ss_pred EEEECCHH
Confidence 77765443
No 294
>TIGR00632 vsr DNA mismatch endonuclease Vsr. All proteins in this family for which functions are known are G:T mismatch endonucleases that function in a specialized mismatch repair process used usually to repair G:T mismatches in specific sections of the genome. This family was based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University). Members of this family typically are found near to a DNA cytosine methyltransferase.
Probab=20.66 E-value=1.6e+02 Score=24.01 Aligned_cols=14 Identities=7% Similarity=0.000 Sum_probs=11.1
Q ss_pred HHHhccCCcEEEEe
Q 013268 86 AVILLPSNITLFTL 99 (446)
Q Consensus 86 ~~~L~~~Gy~Vi~~ 99 (446)
...|.+.|+.|+.+
T Consensus 100 ~~~L~~~Gw~Vlr~ 113 (117)
T TIGR00632 100 NSRLQELGWRVLRV 113 (117)
T ss_pred HHHHHHCcCEEEEE
Confidence 35788889999876
No 295
>PF10605 3HBOH: 3HB-oligomer hydrolase (3HBOH) ; InterPro: IPR016582 This entry represents a group of predicted D-(-)-3-hydroxybutyrate oligomer hydrolases (also known as 3HB-oligomer hydrolase), which function in the degradation of poly-3-hydroxybutyrate (PHB). These enzymes catalyse the hydrolysis of D(-)-3-hydroxybutyrate oligomers (3HB-oligomers) into 3HB-monomers [, ].; GO: 0047989 hydroxybutyrate-dimer hydrolase activity, 0019605 butyrate metabolic process, 0005615 extracellular space
Probab=20.55 E-value=73 Score=33.69 Aligned_cols=32 Identities=22% Similarity=0.219 Sum_probs=26.6
Q ss_pred EEEEEechhHHHHHHHHHhCCC--ccEEEEeCCc
Q 013268 138 IGLWGRSMGAVTSLLYGAEDPS--IAGMVLDSAF 169 (446)
Q Consensus 138 i~lvG~S~GG~ial~~a~~~p~--v~~lVl~sp~ 169 (446)
++..+.|-||..++.+|.++.+ |++++...|.
T Consensus 287 VIAssvSNGGgAal~AAEqD~~glIdgVvv~EP~ 320 (690)
T PF10605_consen 287 VIASSVSNGGGAALAAAEQDTQGLIDGVVVSEPN 320 (690)
T ss_pred EEEEeecCccHHHHhHhhcccCCceeeEEecCCc
Confidence 5667899999999999988877 9999986553
No 296
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=20.51 E-value=3.1e+02 Score=28.41 Aligned_cols=85 Identities=16% Similarity=0.161 Sum_probs=50.0
Q ss_pred EEECCCCCChhhHHH-HHHHhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechhHH
Q 013268 70 VYCHGNSGCRADANE-AAVILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMGAV 148 (446)
Q Consensus 70 VllHG~g~~~~~~~~-~~~~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~GG~ 148 (446)
+|--|+|.+...... .+++-..+||.|+.+|-.|.-... ..+-..+.-+......+.|..+|--+=|.
T Consensus 442 lfekGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~-----------~~lm~~l~k~~~~~~pd~i~~vgealvg~ 510 (587)
T KOG0781|consen 442 LFEKGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNN-----------APLMTSLAKLIKVNKPDLILFVGEALVGN 510 (587)
T ss_pred HHhhhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCC-----------hhHHHHHHHHHhcCCCceEEEehhhhhCc
Confidence 344566665443333 334455569999999988754332 22334444444444568899998877766
Q ss_pred HHHHHHHh---------CCC-ccEEEE
Q 013268 149 TSLLYGAE---------DPS-IAGMVL 165 (446)
Q Consensus 149 ial~~a~~---------~p~-v~~lVl 165 (446)
=++.-+.. .|+ |+++++
T Consensus 511 dsv~q~~~fn~al~~~~~~r~id~~~l 537 (587)
T KOG0781|consen 511 DSVDQLKKFNRALADHSTPRLIDGILL 537 (587)
T ss_pred HHHHHHHHHHHHHhcCCCccccceEEE
Confidence 55543322 234 777776
No 297
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=20.42 E-value=3.5e+02 Score=23.67 Aligned_cols=54 Identities=13% Similarity=0.049 Sum_probs=38.9
Q ss_pred HhccCCcEEEEeCCCCCCCCCCCCcCCCcchHHHHHHHHHHHHhcCCCCcEEEEEechh
Q 013268 88 ILLPSNITLFTLDFSGSGLSDGDYVSLGWHEKDDLKVVVSYLRGNKQTSRIGLWGRSMG 146 (446)
Q Consensus 88 ~L~~~Gy~Vi~~D~~G~G~S~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~i~lvG~S~G 146 (446)
.|.+.|+..+.+|.=++=..... . ....++.+.++.+++....++|.|+-.|.|
T Consensus 35 ~Lk~~Gik~li~DkDNTL~~~~~---~--~i~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 35 HLKKKGIKALIFDKDNTLTPPYE---D--EIPPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred hhhhcCceEEEEcCCCCCCCCCc---C--cCCHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 37788999999999654211111 1 113678888888888876678999999986
Done!