Citrus Sinensis ID: 013273
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 446 | 2.2.26 [Sep-21-2011] | |||||||
| Q8H0U5 | 641 | Protein TIC 62, chloropla | yes | no | 0.984 | 0.684 | 0.612 | 1e-147 | |
| Q8SKU2 | 534 | Protein TIC 62, chloropla | N/A | no | 0.840 | 0.702 | 0.621 | 1e-131 | |
| Q8H124 | 280 | Uncharacterized protein A | no | no | 0.504 | 0.803 | 0.355 | 5e-26 | |
| Q94EG6 | 253 | Uncharacterized protein A | no | no | 0.515 | 0.909 | 0.267 | 2e-10 | |
| O80934 | 325 | Uncharacterized protein A | no | no | 0.473 | 0.649 | 0.262 | 2e-10 | |
| P48279 | 321 | Uncharacterized protein y | N/A | no | 0.320 | 0.445 | 0.306 | 1e-07 |
| >sp|Q8H0U5|TIC62_ARATH Protein TIC 62, chloroplastic OS=Arabidopsis thaliana GN=TIC62 PE=1 SV=1 | Back alignment and function desciption |
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Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 273/446 (61%), Positives = 332/446 (74%), Gaps = 7/446 (1%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAK--PVASKSTPL 418
E P + K PLSPY SYEDLKP +SP P +T+ +K+ ++DA PV + P+
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422
Query: 419 SEPSSTTTKKEAPKSEMKKTEPLSPY 444
+ +S E + E KK PLSPY
Sbjct: 423 PDSTSNVPVVEVKQVEEKKERPLSPY 448
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Acts as a membrane anchor of LFNR1 and LFNR2. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Arabidopsis thaliana (taxid: 3702) |
| >sp|Q8SKU2|TIC62_PEA Protein TIC 62, chloroplastic OS=Pisum sativum GN=TIC62 PE=1 SV=2 | Back alignment and function description |
|---|
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 251/404 (62%), Positives = 295/404 (73%), Gaps = 29/404 (7%)
Query: 1 MEICSLQSQTLSTIPSPLSRNG---------LIVKSFGSCQILKFPSSKKFSHPR----K 47
ME+ SL S + IPS L+R L + + +++P + ++ R
Sbjct: 3 MEVFSLTS---TAIPSTLTRRDTAADKPSPHLNLSKY--SHFMRYPLTTTLTNNRIRSSS 57
Query: 48 LKLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRV 107
+AQASG+ S P K DSKDDNL FVAGATGKVGSRTVREL+KLGF+V
Sbjct: 58 SSSSSIRAQASGSTK--SSTAEGIPEKTDSKDDNLVFVAGATGKVGSRTVRELIKLGFKV 115
Query: 108 RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVV 167
RAGVR+ Q+A LVQSVKQ+KLDG A+ G + VE LE+VECDLEK QI ALGNAS V
Sbjct: 116 RAGVRNAQKAGALVQSVKQLKLDG--ASGGGEAVEKLEIVECDLEKADQIGSALGNASTV 173
Query: 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNL 227
IC IGASEKE+FDITGP RID++ATKNLVDAAT+AKVNHFI+V+SLGTNKFG PAAILNL
Sbjct: 174 ICAIGASEKEIFDITGPCRIDYRATKNLVDAATVAKVNHFILVTSLGTNKFGLPAAILNL 233
Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQ 287
FWGVL+WKRKAEEAL+ASG+PYTIVRPGGMERPTDAYKETHN+TLS EDTLFGGQVSNLQ
Sbjct: 234 FWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQ 293
Query: 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAA 347
VAEL+A MAKN LSYCK+VEVIAETTAPLTP E+LL +IPSQR +K+D A
Sbjct: 294 VAELMAIMAKNPDLSYCKIVEVIAETTAPLTPAEKLLTRIPSQRPYIPSPKKVQKADTAT 353
Query: 348 ------SKSMISEESS-APITEEPVQTKAKVTDPLSPYTSYEDL 384
S ++++E S AP E + AK PLSPYT+Y+DL
Sbjct: 354 VSNTGPSANVVAEVPSIAPQKETASKPVAKTEQPLSPYTAYDDL 397
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Involved in protein precursor import into chloroplasts. Part of the redox regulon consisting of TIC32, TIC 55 and TIC62. Has a NADPH-dependent dehydrogenase activity, but only after preincubation with lipids. Pisum sativum (taxid: 3888) |
| >sp|Q8H124|Y2446_ARATH Uncharacterized protein At2g34460, chloroplastic OS=Arabidopsis thaliana GN=At2g34460 PE=1 SV=1 | Back alignment and function description |
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Score = 119 bits (297), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/253 (35%), Positives = 132/253 (52%), Gaps = 28/253 (11%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FVAGATG+ G R V +LL GF V+AGVR V++A+ + +++ +G P ++
Sbjct: 50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E++ D + VIC G + FDI P+++D T NLVDA
Sbjct: 108 AEVIGDD-------------SQAVICATGF--RPGFDIFTPWKVDNFGTVNLVDACRKQG 152
Query: 204 VNHFIMVSSLGTNKFGF-----PAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
V F++VSS+ N PA + LNLF L+ K +AE+ + SG+ YTIVRPGG+
Sbjct: 153 VEKFVLVSSILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGGL 212
Query: 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317
+ T N+ + EDTL+ G +S VAE +A A + S KVVE++A AP
Sbjct: 213 KNDP----PTGNVVMEPEDTLYEGSISRDLVAE-VAVEALLQEESSFKVVEIVARAEAPK 267
Query: 318 TPMEELLAKIPSQ 330
++L A + Q
Sbjct: 268 RSYKDLFASVKGQ 280
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Arabidopsis thaliana (taxid: 3702) |
| >sp|Q94EG6|Y5224_ARATH Uncharacterized protein At5g02240 OS=Arabidopsis thaliana GN=At5g02240 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 113/262 (43%), Gaps = 32/262 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKG 137
V GA+G+ G + V + LK G F + VRS Q E + D + N
Sbjct: 8 LVTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPA 66
Query: 138 IQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLV 196
Q ++ L ++ + K + +P G I G P ++D+ KN +
Sbjct: 67 FQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQY---------PEQVDWIGQKNQI 117
Query: 197 DAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
DAA +A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG
Sbjct: 118 DAAKVAGVKHIVVVGSMGGTNPDHPLNKLG-NGNILVWKRKAEQYLADSGTPYTIIRAGG 176
Query: 257 MERPTDAYKETHNITLSQEDTLFG--------GQVSNLQVAELLACMAKNRSLSYCKVVE 308
+ +E + + ++D L V+ + + LL AKN++ E
Sbjct: 177 LLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE 233
Query: 309 VIAETTAPLTPMEELLAKIPSQ 330
T+ P + L +++ S+
Sbjct: 234 ---GTSTPTKDFKALFSQVTSR 252
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Arabidopsis thaliana (taxid: 3702) |
| >sp|O80934|Y2766_ARATH Uncharacterized protein At2g37660, chloroplastic OS=Arabidopsis thaliana GN=At2g37660 PE=1 SV=2 | Back alignment and function description |
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Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 110/263 (41%), Gaps = 52/263 (19%)
Query: 43 SHPRKLKLPDFKAQASGTINIC--------SEAVGATPTKADSKDDNLAFVAGATGKVGS 94
S PR L F++ S + +IC + V T + A + + V GA G+ G
Sbjct: 32 SVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAGGRTGQ 90
Query: 95 RTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152
++L + F R VR+ + E K++GE E+ D+
Sbjct: 91 IVYKKLKERSEQFVARGLVRTKESKE---------KINGED-----------EVFIGDIR 130
Query: 153 KRVQIEPALGNASVVICCIGA-------------SEKEVFDITGPY--RIDFQATKNLVD 197
I PA+ ++ A E F G Y ++D+ KN +D
Sbjct: 131 DTASIAPAVEGIDALVILTSAVPQMKPGFDPSKGGRPEFFFDDGAYPEQVDWIGQKNQID 190
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
AA A V ++V S+G P +I N +L+WKRKAE+ L SG+PYTI+R GG
Sbjct: 191 AAKAAGVKQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGG 248
Query: 257 MERPTDAYKETHNITLSQEDTLF 279
++ +E + + ++D L
Sbjct: 249 LQDKDGGIRE---LLVGKDDELL 268
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Arabidopsis thaliana (taxid: 3702) |
| >sp|P48279|YCF39_CYAPA Uncharacterized protein ycf39 OS=Cyanophora paradoxa GN=ycf39 PE=3 SV=1 | Back alignment and function description |
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Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 30/173 (17%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG +G + VR L G++VR VR++++A L + ++ + G+L+ QP +L
Sbjct: 5 VIGATGTLGRQIVRSALDEGYQVRCLVRNLRKAAFLKEWGAKL-IWGDLS----QPESLL 59
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
PAL V+I S D G Y++D + K L+DAA K+
Sbjct: 60 --------------PALTGIRVII---DTSTSRPTDPAGVYQVDLKGKKALIDAAKAMKI 102
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
FI S L + K+ ++ + K EE L SGL YTI + G
Sbjct: 103 EKFIFFSILNSEKYS-QVPLMRI-------KTVTEELLKESGLNYTIFKLCGF 147
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Cyanophora paradoxa (taxid: 2762) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 446 | ||||||
| 225428568 | 529 | PREDICTED: protein TIC 62, chloroplastic | 0.988 | 0.833 | 0.677 | 1e-161 | |
| 224103467 | 564 | predicted protein [Populus trichocarpa] | 0.961 | 0.760 | 0.677 | 1e-160 | |
| 255556137 | 584 | NAD dependent epimerase/dehydratase, put | 0.982 | 0.75 | 0.649 | 1e-159 | |
| 224080277 | 517 | predicted protein [Populus trichocarpa] | 0.986 | 0.851 | 0.668 | 1e-158 | |
| 147770508 | 535 | hypothetical protein VITISV_033052 [Viti | 0.988 | 0.824 | 0.647 | 1e-157 | |
| 30685117 | 641 | Rossmann-fold NAD(P)-binding domain-cont | 0.984 | 0.684 | 0.612 | 1e-146 | |
| 297830550 | 668 | catalytic/ coenzyme binding protein [Ara | 0.984 | 0.657 | 0.593 | 1e-143 | |
| 9294698 | 649 | unnamed protein product [Arabidopsis tha | 0.984 | 0.676 | 0.599 | 1e-142 | |
| 356545313 | 528 | PREDICTED: uncharacterized protein LOC10 | 0.982 | 0.829 | 0.616 | 1e-137 | |
| 157849706 | 624 | catalytic/coenzyme binding protein [Bras | 0.887 | 0.634 | 0.615 | 1e-137 |
| >gi|225428568|ref|XP_002284662.1| PREDICTED: protein TIC 62, chloroplastic isoform 1 [Vitis vinifera] gi|297741413|emb|CBI32544.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 305/450 (67%), Positives = 350/450 (77%), Gaps = 9/450 (2%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME+ SLQS T+++IP G I K F Q+L+ PSS++ RKL + +F+AQA+GT
Sbjct: 1 MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
+GA KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61 TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
+QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL+A MAKNR
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELIAFMAKNRG 300
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPA----ASKSMISEES 356
SYCKVVEVIAETTAPLTP ELLAKIPSQR + ++P++SD A +
Sbjct: 301 SSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VSPKESDAADGPAPVPVVSGPPP 356
Query: 357 SAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAKPVASKST 416
S PI + P Q KA PLSPY YEDLKP +SP+PTPST+ ++ D+D P KS
Sbjct: 357 STPIEKGPPQGKATAMSPLSPYIVYEDLKPPTSPTPTPSTSSSTARAPDVDGIPAEPKSI 416
Query: 417 P-LSEPSSTTTKKEAPKSEMKKTEPLSPYI 445
P + EP ST KEA + E KKT PLSPYI
Sbjct: 417 PSVLEPLSTVLAKEAIQEEAKKTRPLSPYI 446
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Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224103467|ref|XP_002313068.1| predicted protein [Populus trichocarpa] gi|222849476|gb|EEE87023.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/449 (67%), Positives = 341/449 (75%), Gaps = 20/449 (4%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME CSLQS ++TIP+ L++ G I K Q LKFP+ KF+H RKLK+ D KAQAS
Sbjct: 1 MESCSLQSSAITTIPTSLTKCGFIEKPSIHGQFLKFPNLSKFAHSRKLKILDIKAQAS-- 58
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
V A + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 59 -------VEAISKEMETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 111
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
QSVK+MKLD E G QPVE LE VECDLEK QI PALGNASVV+CCIGASEKEVFD
Sbjct: 112 AQSVKEMKLDVE----GSQPVERLETVECDLEKPNQIGPALGNASVVLCCIGASEKEVFD 167
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
+TGP RID++ATKNLVDAAT+AKV+HFIMVSSLGTNKFGFPAAILNLFWGVL+WKRKAEE
Sbjct: 168 VTGPCRIDYRATKNLVDAATVAKVDHFIMVSSLGTNKFGFPAAILNLFWGVLIWKRKAEE 227
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
ALIASG+PYTIVRPGGMERPTDAYKETHN+T+S+EDTLFGGQVSNLQVAE +A MAKNR
Sbjct: 228 ALIASGVPYTIVRPGGMERPTDAYKETHNLTVSEEDTLFGGQVSNLQVAEFMAFMAKNRG 287
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPK+S A E K + E S P
Sbjct: 288 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKKSDAAELPKSVPPKIVEPEAPSPPS 347
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAKPVASKSTPLSE 420
EP Q KA VT PLSPYT+YEDLKP +SP P T P K + + V+ TP
Sbjct: 348 QREPAQAKAVVTRPLSPYTAYEDLKPPTSPIP---TQPSGKKENVNSVEAVSMLDTPDPS 404
Query: 421 PSSTT---TKKEAPKSEMKKTEPLSPYIA 446
P+S + K AP E K PLSPY+A
Sbjct: 405 PASASGIAETKPAP-VETKTARPLSPYVA 432
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Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|255556137|ref|XP_002519103.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] gi|223541766|gb|EEF43314.1| NAD dependent epimerase/dehydratase, putative [Ricinus communis] | Back alignment and taxonomy information |
|---|
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 295/454 (64%), Positives = 347/454 (76%), Gaps = 16/454 (3%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME SLQS ++TIP+ L+++G + K+F Q+++F S K+ H RK++ KAQASG
Sbjct: 1 MERYSLQSSAITTIPTSLTKSGFLHKTFLHGQLIRFSSFSKYPHARKIRTFGIKAQASGV 60
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
S A+ A P + D KDDNLAFVAGATG+VGSRTVRELLKLGF+VRAGVRS QRA+ L
Sbjct: 61 TKFSSGAIEAIPKETDIKDDNLAFVAGATGRVGSRTVRELLKLGFQVRAGVRSAQRAQTL 120
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
VQSVKQMKLDGE G QP+E E++ECDL+K +I ALGNAS+VICCIGA EKEVFD
Sbjct: 121 VQSVKQMKLDGE----GAQPIEKFEIIECDLDKPNEIGAALGNASIVICCIGAGEKEVFD 176
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
TGPYRID+QAT+NL+DAAT+AKV HFIMVSSLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 FTGPYRIDYQATRNLIDAATVAKVKHFIMVSSLGTNKVGFPAAILNLFWGVLFWKRKAEE 236
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGGQVSNLQVAEL+A MAKN
Sbjct: 237 ALIASGIPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGQVSNLQVAELMAVMAKNLD 296
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISE--ESSA 358
LSYCKVVEVIAETTAPLT M++LL +IPSQR +PKE A E +PA S ++ E E ++
Sbjct: 297 LSYCKVVEVIAETTAPLTTMDKLLTRIPSQRIKPKEPAAAEGPEPAPSTKVVPEASEPTS 356
Query: 359 PITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPT-PSTTPGASKTSDIDAKPVASKSTP 417
I +EP Q KA V+ PLSPYT+Y+DLKP +SP P PS G +S +DA VA T
Sbjct: 357 AIEKEPEQPKATVSRPLSPYTAYDDLKPPTSPIPIRPSG--GNQSSSPVDA--VAKPDTI 412
Query: 418 LSEPSSTTTKKEAPKS-----EMKKTEPLSPYIA 446
++ SS+ P+S E K PLSPY A
Sbjct: 413 DAQTSSSGLASAIPESKPATVEAKIAGPLSPYAA 446
|
Source: Ricinus communis Species: Ricinus communis Genus: Ricinus Family: Euphorbiaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224080277|ref|XP_002306080.1| predicted protein [Populus trichocarpa] gi|222849044|gb|EEE86591.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 564 bits (1454), Expect = e-158, Method: Compositional matrix adjust.
Identities = 299/447 (66%), Positives = 338/447 (75%), Gaps = 7/447 (1%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME LQS ++TIP+ L++ G I KS Q+LKFP KF H RKLK+ D KAQAS
Sbjct: 1 MEGGCLQSSAITTIPTSLTKCGFIEKSCIHGQLLKFPHFNKFPHSRKLKILDIKAQASVA 60
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
S AV A + ++KD+NLAFVAGATGKVGSR VRELLKLGFRVRAGVRS Q+AE L
Sbjct: 61 AKFRSGAVEADSKEVETKDENLAFVAGATGKVGSRAVRELLKLGFRVRAGVRSAQKAEAL 120
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
VQSV MKLD E G QPVE L++VECDLEK QI PALGNASV++CCIGA EKEVFD
Sbjct: 121 VQSVMAMKLDVE----GSQPVERLDIVECDLEKPNQIGPALGNASVLLCCIGAGEKEVFD 176
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
+TGPYRID+ ATKNLVDAAT KVNHFIMVSSLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATATKVNHFIMVSSLGTNKVGFPAAILNLFWGVLIWKRKAEE 236
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
ALIASG+PYTIVRPGGMERPTDAYKETHNITLS+EDTLFGG VSNLQVAEL+A MA NR
Sbjct: 237 ALIASGVPYTIVRPGGMERPTDAYKETHNITLSEEDTLFGGLVSNLQVAELMAFMANNRR 296
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
LSYCKVVEVIAETTAPLTPM+ELLAKIPSQR EPKE A + P K + + S+P
Sbjct: 297 LSYCKVVEVIAETTAPLTPMDELLAKIPSQRVEPKEPEAADVPKPVPPKVVEPKAPSSPS 356
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPT-PSTTPGASKTSDIDAKPVASKSTPLS 419
+EP Q KA VT PLSPYT+Y+DLKP +SP+P PS+ ++ + +KP + P+
Sbjct: 357 QKEPAQAKAMVTRPLSPYTAYDDLKPPTSPTPIQPSSKKESAGPLEAVSKPATQDTPPMP 416
Query: 420 EPSSTTTKKEAPKSEMKKTEPLSPYIA 446
P TK E K T PLSPY A
Sbjct: 417 APGVAETKPGP--VETKTTRPLSPYAA 441
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|147770508|emb|CAN75677.1| hypothetical protein VITISV_033052 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 305/471 (64%), Positives = 350/471 (74%), Gaps = 30/471 (6%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME+ SLQS T+++IP G I K F Q+L+ PSS++ RKL + +F+AQA+GT
Sbjct: 1 MELRSLQSPTVTSIPKLNRSGGFIEKPFLCGQVLRLPSSRRCPDSRKLTVLEFRAQATGT 60
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
+GA KAD KD++LAFVAGATG+VGSRTVRELLKLGFRVRAGVR+ Q+AE L
Sbjct: 61 TKFSFSTIGAIQDKADLKDEDLAFVAGATGRVGSRTVRELLKLGFRVRAGVRTAQKAEAL 120
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
+QSVKQMKLD E A++G QPVE LE+VECDLEKR QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 IQSVKQMKLDVESASEGTQPVEKLEIVECDLEKRDQIGPALGNASVVICCIGASEKEVFD 180
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
ITGPYRID+ ATKNL+DAAT+AKVNHFI+++SLGTNK GFPAAILNLFWGVL+WKRKAEE
Sbjct: 181 ITGPYRIDYMATKNLIDAATVAKVNHFILLTSLGTNKVGFPAAILNLFWGVLIWKRKAEE 240
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL-------------- 286
AL ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL
Sbjct: 241 ALFASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQMQTWLKKLNATPK 300
Query: 287 -------QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIA 339
QVAEL+A MAKNR SYCKVVEVIAETTAPLTP ELLAKIPSQR + ++
Sbjct: 301 VTFVNKFQVAELIAFMAKNRGSSYCKVVEVIAETTAPLTPFGELLAKIPSQRVD----VS 356
Query: 340 PEKSDPA----ASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPS 395
P++SD A + S PI + P Q KA PLSPY YEDLKP +SP+PTPS
Sbjct: 357 PKESDAADGPXPVPVVSGPPPSTPIEKGPPQGKATAMSPLSPYIVYEDLKPPTSPTPTPS 416
Query: 396 TTPGASKTSDIDAKPVASKSTP-LSEPSSTTTKKEAPKSEMKKTEPLSPYI 445
T+ ++ D+D P KS P + EP ST KEA + E KKT PLSPYI
Sbjct: 417 TSSSTARAPDVDGIPAEPKSIPSVLEPXSTVLAKEAIQEEAKKTRPLSPYI 467
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|30685117|ref|NP_188519.2| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] gi|75151827|sp|Q8H0U5.1|TIC62_ARATH RecName: Full=Protein TIC 62, chloroplastic; AltName: Full=Translocon at the inner envelope membrane of chloroplasts 62; Short=AtTIC62; Flags: Precursor gi|25083201|gb|AAN72050.1| Unknown protein [Arabidopsis thaliana] gi|30725480|gb|AAP37762.1| At3g18890 [Arabidopsis thaliana] gi|332642643|gb|AEE76164.1| Rossmann-fold NAD(P)-binding domain-containing protein [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 523 bits (1346), Expect = e-146, Method: Compositional matrix adjust.
Identities = 273/446 (61%), Positives = 332/446 (74%), Gaps = 7/446 (1%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K + E ++
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVTQEPTAPKE 362
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAK--PVASKSTPL 418
E P + K PLSPY SYEDLKP +SP P +T+ +K+ ++DA PV + P+
Sbjct: 363 DEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVPV 422
Query: 419 SEPSSTTTKKEAPKSEMKKTEPLSPY 444
+ +S E + E KK PLSPY
Sbjct: 423 PDSTSNVPVVEVKQVEEKKERPLSPY 448
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|297830550|ref|XP_002883157.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] gi|297328997|gb|EFH59416.1| catalytic/ coenzyme binding protein [Arabidopsis lyrata subsp. lyrata] | Back alignment and taxonomy information |
|---|
Score = 514 bits (1325), Expect = e-143, Method: Compositional matrix adjust.
Identities = 272/458 (59%), Positives = 331/458 (72%), Gaps = 19/458 (4%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGLKNHSVSGKSRSFDLSIRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A P +SK+D+L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSAVTEANPANLNSKEDDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGAQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFG PAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGLPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
ASGL Y IVRPGGMERPTDAYKETHN+TLS +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ASGLNYAIVRPGGMERPTDAYKETHNLTLSLDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLT +E+LL KIPS+R PK S+A ++ P +K + E ++
Sbjct: 303 SKIVEVVAETTAPLTSIEKLLEKIPSKRPYVPPPKASVAAKEVKPVPTKPVTQEPTAPKE 362
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAKPVASKSTPLSE 420
E P + K PLSPY +YEDLKP +SP P+ +T+ G +K+ ++DA V ++ +
Sbjct: 363 DEAPPKEKDVKPRPLSPYAAYEDLKPPTSPIPSSTTSVGPAKSKEVDATQVLVEANVVPV 422
Query: 421 PSSTTTKKEAP--------------KSEMKKTEPLSPY 444
P ST+ ++E KK PLSPY
Sbjct: 423 PDSTSNVPVVEEEEVKQAVEEVEVMQAEEKKERPLSPY 460
|
Source: Arabidopsis lyrata subsp. lyrata Species: Arabidopsis lyrata Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|9294698|dbj|BAB03098.1| unnamed protein product [Arabidopsis thaliana] | Back alignment and taxonomy information |
|---|
Score = 512 bits (1318), Expect = e-142, Method: Compositional matrix adjust.
Identities = 272/454 (59%), Positives = 331/454 (72%), Gaps = 15/454 (3%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQ--------PVEMLELVECDLEKRVQIEPALGNASVVICCIGASE 175
VK+MKL ++G Q VE LE+VECDLEK+ I+PALGNASV+ICCIGASE
Sbjct: 125 VKEMKLQN--TDEGTQRSVCVFSPAVEKLEIVECDLEKKDSIQPALGNASVIICCIGASE 182
Query: 176 KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235
KE+ DITGPYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WK
Sbjct: 183 KEISDITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWK 242
Query: 236 RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295
RKAEEALI SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACM
Sbjct: 243 RKAEEALIESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACM 302
Query: 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMI 352
AKN LS+ K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K +
Sbjct: 303 AKNPQLSFSKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKPVT 362
Query: 353 SEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAK--P 410
E ++ E P + K PLSPY SYEDLKP +SP P +T+ +K+ ++DA P
Sbjct: 363 QEPTAPKEDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVP 422
Query: 411 VASKSTPLSEPSSTTTKKEAPKSEMKKTEPLSPY 444
V + P+ + +S E + E KK PLSPY
Sbjct: 423 VEANVVPVPDSTSNVPVVEVKQVEEKKERPLSPY 456
|
Source: Arabidopsis thaliana Species: Arabidopsis thaliana Genus: Arabidopsis Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|356545313|ref|XP_003541088.1| PREDICTED: uncharacterized protein LOC100779056 [Glycine max] | Back alignment and taxonomy information |
|---|
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 280/454 (61%), Positives = 329/454 (72%), Gaps = 16/454 (3%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQI-----LKFPSSKKFSHPRKLKLPDFKA 55
ME S+QS T +TIPS LSR G K + + +++P + + + K K+ +A
Sbjct: 1 MEAFSVQSLTATTIPSSLSRRGATDKPSATSHVNLSHFMRYPCTTRST---KQKILCTRA 57
Query: 56 QASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115
QASG+ + + K DSKDDNL FVAGATG+VGSRTVREL+KLGFRVRAGVRS Q
Sbjct: 58 QASGSTKSSTGSAEGISEKTDSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRSAQ 117
Query: 116 RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASE 175
RA LVQSV+Q+KLDG A+ G Q VE LE+VECDLEK I ALG+AS VIC IGASE
Sbjct: 118 RAGALVQSVEQLKLDG--ASGGGQAVEKLEIVECDLEKPETIGSALGDASTVICSIGASE 175
Query: 176 KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235
KEVFDITGP+RID+QATKNL+DAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL+WK
Sbjct: 176 KEVFDITGPFRIDYQATKNLIDAATVAKVNHFILVTSLGTNKIGFPAAILNLFWGVLVWK 235
Query: 236 RKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295
RKAEEAL+ASGLPYTIVRPGGMERPTDA+KETHNITLS EDTLFGG VSNLQ+AELLA M
Sbjct: 236 RKAEEALLASGLPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELLAVM 295
Query: 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKESIAPEKSDPAASKSMI 352
AKNR LSYCK+VE IAETTAPLTPMEELLAKIPSQR + PK+ S P +++
Sbjct: 296 AKNRDLSYCKIVEAIAETTAPLTPMEELLAKIPSQRPYISSPKKPDIAAVSVPDPPANVV 355
Query: 353 SEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAKPVA 412
+ E +E Q K PLSPY Y+DLKP SSPSP+ +K S+ KP A
Sbjct: 356 TVEPKVATQQETAQPKPVAKQPLSPYIVYDDLKPPSSPSPSQPGGGKPTKISETVPKPSA 415
Query: 413 SKSTPLSEPSSTTTKKEAPKSEMKKTEPLSPYIA 446
S TP S P + S+++K PLSPY+A
Sbjct: 416 S-DTPSSVPGVDGISQTTSSSKVEK--PLSPYVA 446
|
Source: Glycine max Species: Glycine max Genus: Glycine Family: Fabaceae Order: Fabales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|157849706|gb|ABV89636.1| catalytic/coenzyme binding protein [Brassica rapa] | Back alignment and taxonomy information |
|---|
Score = 493 bits (1270), Expect = e-137, Method: Compositional matrix adjust.
Identities = 266/432 (61%), Positives = 320/432 (74%), Gaps = 36/432 (8%)
Query: 6 LQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDF-----KAQASGT 60
L+ Q L+T+PS L R +++ + + +I++F K +H +K F +A G
Sbjct: 7 LRGQPLTTVPS-LPRQRFLLQGWKNNRIVRFSGLK--NHSDSIKSRSFFDLSLRASDKGP 63
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
I S A+PT ++SK+ +L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA+ L
Sbjct: 64 IKASSAVTDASPTNSESKEQDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAKGL 123
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
VQSVK M D +G QPVE LE+VECDLEK+ I+PALGNASVVICCIGASEKE+ D
Sbjct: 124 VQSVKDMNTD-----EGTQPVEKLEVVECDLEKKDSIQPALGNASVVICCIGASEKEISD 178
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
ITGPYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEE
Sbjct: 179 ITGPYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEE 238
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
ALIASGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN
Sbjct: 239 ALIASGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQ 298
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQR---AEPKES-----IAPEKSDPAASKSMI 352
LS K+VEV+AETTAPLTP+E+LL KIPS+R PKES + P ++P +S+
Sbjct: 299 LSCSKIVEVVAETTAPLTPIEKLLKKIPSKRPYVPPPKESVPAKEVTPVPAEPVKQESVA 358
Query: 353 SEESSA----PITEEPVQTK-----AKVTD----PLSPYTSYEDLKPSSSPSPTPSTTPG 399
++E + P+T+EP K A+V D PLSPY +YEDLKP + SP P+T G
Sbjct: 359 AKEVTPVLTEPVTKEPTAPKEDKAPAEVKDVKPRPLSPYAAYEDLKPPT--SPIPATALG 416
Query: 400 ASKTSDIDAKPV 411
A+K ++DA PV
Sbjct: 417 ATKAKEVDATPV 428
|
Source: Brassica rapa Species: Brassica rapa Genus: Brassica Family: Brassicaceae Order: Brassicales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 446 | ||||||
| TAIR|locus:2087901 | 641 | Tic62 "translocon at the inner | 0.982 | 0.683 | 0.597 | 8.4e-129 | |
| TAIR|locus:2040854 | 280 | AT2G34460 [Arabidopsis thalian | 0.502 | 0.8 | 0.314 | 5.8e-19 | |
| TAIR|locus:2102842 | 510 | PTAC16 "plastid transcriptiona | 0.683 | 0.598 | 0.277 | 1.8e-17 | |
| TAIR|locus:2185228 | 253 | AT5G02240 [Arabidopsis thalian | 0.520 | 0.916 | 0.279 | 8.9e-12 | |
| TAIR|locus:2040716 | 325 | AT2G37660 [Arabidopsis thalian | 0.614 | 0.843 | 0.246 | 2e-11 | |
| TAIR|locus:2180019 | 417 | PCB2 "PALE-GREEN AND CHLOROPHY | 0.690 | 0.738 | 0.267 | 7.6e-08 | |
| UNIPROTKB|Q71X34 | 209 | LMOf2365_2365 "Putative unchar | 0.150 | 0.320 | 0.375 | 0.00046 |
| TAIR|locus:2087901 Tic62 "translocon at the inner envelope membrane of chloroplasts 62" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1264 (450.0 bits), Expect = 8.4e-129, P = 8.4e-129
Identities = 267/447 (59%), Positives = 321/447 (71%)
Query: 4 CSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINI 63
C L+ Q L+TIPS SR G +++ + + +I++F K S K + D +ASG I
Sbjct: 5 CFLRGQPLTTIPSLPSRKGFLLQRWKTNRIVRFSGFKNHSVSGKSRSFDLSLRASGPIRA 64
Query: 64 CSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123
S A+PT +SK+++L FVAGATGKVGSRTVRELLKLGFRVRAGVRS QRA +LVQS
Sbjct: 65 SSVVTEASPTNLNSKEEDLVFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAGSLVQS 124
Query: 124 VKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG 183
VK+MKL ++G QPVE LE+VECDLEK+ I+PALGNASV+ICCIGASEKE+ DITG
Sbjct: 125 VKEMKLQN--TDEGTQPVEKLEIVECDLEKKDSIQPALGNASVIICCIGASEKEISDITG 182
Query: 184 PYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI 243
PYRID+ ATKNLVDAAT AKVN+FI+V+SLGTNKFGFPAAILNLFWGVL WKRKAEEALI
Sbjct: 183 PYRIDYLATKNLVDAATSAKVNNFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALI 242
Query: 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303
SGL Y IVRPGGMERPTDAYKETHN+TL+ +DTLFGGQVSNLQVAELLACMAKN LS+
Sbjct: 243 ESGLNYAIVRPGGMERPTDAYKETHNLTLALDDTLFGGQVSNLQVAELLACMAKNPQLSF 302
Query: 304 CKVVEVIAETTAPLTPMEELLAKIPSQRA---EPKESIAPEKSDPAASKSMISEESSAPI 360
K+VEV+AETTAPLTP+E+LL KIPS+R PK S+A ++ P +K +++E +AP
Sbjct: 303 SKIVEVVAETTAPLTPIEKLLEKIPSKRPYVPPPKASVATKEVKPVPTKP-VTQEPTAPK 361
Query: 361 TEE-PVQTKAKVTDPLSPYTSYEDLKXXXXXXXXXXXXXGASKTSDIDAK--PVAXXXXX 417
+E P + K PLSPY SYEDLK +K+ ++DA PV
Sbjct: 362 EDEAPPKEKNVKPRPLSPYASYEDLKPPTSPIPNSTTSVSPAKSKEVDATQVPVEANVVP 421
Query: 418 XXXXXXXXXXXXAPKSEMKKTEPLSPY 444
+ E KK PLSPY
Sbjct: 422 VPDSTSNVPVVEVKQVEEKKERPLSPY 448
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| TAIR|locus:2040854 AT2G34460 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 232 (86.7 bits), Expect = 5.8e-19, P = 5.8e-19
Identities = 80/254 (31%), Positives = 123/254 (48%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FVAGATG+ G R V +LL GF V+AGVR V++A+ + +++ +G P ++
Sbjct: 50 FVAGATGQTGKRIVEQLLSRGFAVKAGVRDVEKAKTSFKDDPSLQIVRADVTEG--PDKL 107
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEK-EVF-----DITGPYRIDFQATKNLVD 197
E++ D + VIC G ++F D G + K V+
Sbjct: 108 AEVIGDD-------------SQAVICATGFRPGFDIFTPWKVDNFGTVNLVDACRKQGVE 154
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPAAI-LNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
+ I+V+ + PA + LNLF L+ K +AE+ + SG+ YTIVRPGG
Sbjct: 155 KFVLVSS---ILVNGAAMGQILNPAYLFLNLFGLTLVAKLQAEKYIKKSGINYTIVRPGG 211
Query: 257 MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316
++ T N+ + EDTL+ G +S VAE+ A A + S KVVE++A AP
Sbjct: 212 LKNDPP----TGNVVMEPEDTLYEGSISRDLVAEV-AVEALLQEESSFKVVEIVARAEAP 266
Query: 317 LTPMEELLAKIPSQ 330
++L A + Q
Sbjct: 267 KRSYKDLFASVKGQ 280
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| TAIR|locus:2102842 PTAC16 "plastid transcriptionally active 16" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 239 (89.2 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 96/346 (27%), Positives = 163/346 (47%)
Query: 49 KLPDFKAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVR 108
KLPD K+ N + V K KD FVAGATG+ G R + LL+ GF VR
Sbjct: 63 KLPDMKSLIPVVTNPSTGLVFGNNRK---KDPGTIFVAGATGQAGIRIAQTLLQRGFSVR 119
Query: 109 AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVI 168
AGV + A++L + K+ L+N V+ L V+ + I A+GNA+ V+
Sbjct: 120 AGVPDLGAAQDLARVAATYKI---LSN---DEVKRLNAVQSPFQDAESIAKAIGNATKVV 173
Query: 169 CCIGASEKEVFDITGP-YRIDFQATKNLVDAATIAKVNHFIMV--SSLGTNKFGFPAAIL 225
+GA+E GP ++ +V AA +A V+H +V ++ + + I
Sbjct: 174 VTVGATEN------GPDAQVSTSDALLVVQAAELAGVSHVAIVYDGTISGSTYNVLDGIT 227
Query: 226 NLFWGVLLWKRKAE------EALIASGLPYTIVRPGGME--RPTDAYKETHNITLSQEDT 277
+ F+G L K + E + + + YT+++ E P AY N+ +S E +
Sbjct: 228 S-FFGNLFAKSQPLTISDLIEKVAQTDVAYTLIKTSLTEDFSPEKAY----NVVVSAEGS 282
Query: 278 LFGG--------QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329
G +V L++A L+A + N +++ KVVEV + +AP P++EL + IP
Sbjct: 283 NSGSGSSSSEAYKVPKLKIASLVADIFANTAVAENKVVEVSTDPSAPSRPVDELFSVIPE 342
Query: 330 --QRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTD 373
+R ++IA E+++ A + +A +E + K+++
Sbjct: 343 DGRRKVYADAIARERAEEEAKVAADKAREAAEAAKEFEKQMQKLSE 388
|
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| TAIR|locus:2185228 AT5G02240 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 177 (67.4 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 72/258 (27%), Positives = 115/258 (44%)
Query: 85 VAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMK---LDGELANKGI 138
V GA+G+ G + V + LK G F + VRS Q E + D + N
Sbjct: 9 VTGASGRTG-QIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 67
Query: 139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVF-DITGPYRIDFQATKNLVD 197
Q ++ L ++ + K ++P G + +F D P ++D+ KN +D
Sbjct: 68 QGIDALVILTSAVPK---MKPGFDPTK------GGRPEFIFEDGQYPEQVDWIGQKNQID 118
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
AA +A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG+
Sbjct: 119 AAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSGTPYTIIRAGGL 177
Query: 258 ERPTDAYKET---HNITLSQEDT--LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 312
+E + L Q DT + V+ + + LL AKN++ E
Sbjct: 178 LDKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEEAKNKAFDLGSKPE---G 234
Query: 313 TTAPLTPMEELLAKIPSQ 330
T+ P + L +++ S+
Sbjct: 235 TSTPTKDFKALFSQVTSR 252
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| TAIR|locus:2040716 AT2G37660 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 181 (68.8 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 75/304 (24%), Positives = 137/304 (45%)
Query: 38 SSKKFSHPRKLKLPDFKAQASGTINICSEA--------VGATPTKADSKDDNLAFVAGAT 89
+S S PR L F++ S + +IC + V T + A + + V GA
Sbjct: 27 ASSFVSVPRSSSL-QFRSLVSDSTSICGPSKFTGKNRRVSVTVSAAATTEPLTVLVTGAG 85
Query: 90 GKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG-IQP-VEMLE 145
G+ G ++L + F R VR+ + E + ++ + G++ + I P VE ++
Sbjct: 86 GRTGQIVYKKLKERSEQFVARGLVRTKESKEK-INGEDEVFI-GDIRDTASIAPAVEGID 143
Query: 146 LVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITG-PYRIDFQATKNLVDAATIAKV 204
+ Q++P + G + FD P ++D+ KN +DAA A V
Sbjct: 144 ALVILTSAVPQMKPGFDPSK------GGRPEFFFDDGAYPEQVDWIGQKNQIDAAKAAGV 197
Query: 205 NHFIMVSSLGTNKFGFPA-AILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
++V S+G P +I N +L+WKRKAE+ L SG+PYTI+R GG++
Sbjct: 198 KQIVLVGSMGGTNINHPLNSIGNA--NILVWKRKAEQYLADSGIPYTIIRAGGLQDKDGG 255
Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELL-ACM-AKNRSLSYCKVVEVIAETTAPLTPME 321
+E + + ++D L + + A++ C+ A + K +++ ++ TP +
Sbjct: 256 IRE---LLVGKDDELLETETRTIARADVAEVCVQALQLEEAKFKALDLASKPEGTGTPTK 312
Query: 322 ELLA 325
+ A
Sbjct: 313 DFKA 316
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| TAIR|locus:2180019 PCB2 "PALE-GREEN AND CHLOROPHYLL B REDUCED 2" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 152 (58.6 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 95/355 (26%), Positives = 153/355 (43%)
Query: 1 MEICSLQSQTLSTIPSP--LSRNGLIVKSFGSCQILKFPSSKKF-----SHPRKLKLPDF 53
M +CS + S P P + ++ + F Q+ P + F S K K
Sbjct: 1 MSLCSSFNVFASYSPKPKTIFKDSKFISQF---QVKSSPLASTFHTNESSTSLKYKRARL 57
Query: 54 KAQASGTINICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
K +S I A + KD N+ V G+TG +G V+E++K GF V A R
Sbjct: 58 KPISSLDSGISEIATSPSFRNKSPKDINV-LVVGSTGYIGRFVVKEMIKRGFNVIAVARE 116
Query: 114 VQ--RAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG-NASVVIC 169
R +N +++KQ L G AN V L+++E +E LG VV+
Sbjct: 117 KSGIRGKNDKEETLKQ--LQG--ANVCFSDVTELDVLEKSIEN-------LGFGVDVVVS 165
Query: 170 CIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK--FGFPAAILNL 227
C+ + + D ++ID++ATKN + A HF+++S++ K F A L
Sbjct: 166 CLASRNGGIKD---SWKIDYEATKNSLVAGKKFGAKHFVLLSAICVQKPLLEFQRAKLK- 221
Query: 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG-GQVSNL 286
F L+ + ++ S Y+IVRP + E + + +FG G++
Sbjct: 222 FEAELMDLAEQQD----SSFTYSIVRPTAFFKSLGGQVEI--VKDGKPYVMFGDGKLCAC 275
Query: 287 Q-VAEL-LACMAKNRSLSYCKVVEV--IAETTAPLTPME--ELLAKIPSQRAEPK 335
+ ++E LA + L K+ +V I LTP+E E+L KI + EPK
Sbjct: 276 KPISEQDLAAFIADCVLEENKINQVLPIGGPGKALTPLEQGEILFKILGR--EPK 328
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| UNIPROTKB|Q71X34 LMOf2365_2365 "Putative uncharacterized protein" [Listeria monocytogenes serotype 4b str. F2365 (taxid:265669)] | Back alignment and assigned GO terms |
|---|
Score = 87 (35.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 27/72 (37%), Positives = 37/72 (51%)
Query: 187 IDFQATKNLVDAATIAKVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALIAS 245
ID ++ A V FI+VSS G N P ++++ L K+ A+E L S
Sbjct: 85 IDQNGAIKAIETAKEKGVRRFIIVSSYGADNPENGPESLIHY----LKAKQAADEELKRS 140
Query: 246 GLPYTIVRPGGM 257
GL YTIVRP G+
Sbjct: 141 GLDYTIVRPVGL 152
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q8H0U5 | TIC62_ARATH | No assigned EC number | 0.6121 | 0.9843 | 0.6848 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | eugene3.00090558 | hypothetical protein (565 aa) | |||||||||
(Populus trichocarpa) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 446 | |||
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 0.0 | |
| cd05243 | 203 | cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | 2e-59 | |
| PLN00141 | 251 | PLN00141, PLN00141, Tic62-NAD(P)-related group II | 8e-36 | |
| pfam13460 | 182 | pfam13460, NAD_binding_10, NADH(P)-binding | 2e-26 | |
| cd05226 | 176 | cd05226, SDR_e_a, Extended (e) and atypical (a) SD | 9e-22 | |
| cd05269 | 272 | cd05269, TMR_SDR_a, triphenylmethane reductase (TM | 7e-19 | |
| cd05244 | 207 | cd05244, BVR-B_like_SDR_a, biliverdin IX beta redu | 2e-16 | |
| cd05251 | 242 | cd05251, NmrA_like_SDR_a, NmrA (a transcriptional | 6e-16 | |
| pfam05368 | 232 | pfam05368, NmrA, NmrA-like family | 2e-15 | |
| cd05271 | 273 | cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ub | 1e-14 | |
| cd05250 | 214 | cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical | 1e-13 | |
| PLN02657 | 390 | PLN02657, PLN02657, 3,8-divinyl protochlorophyllid | 4e-13 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 6e-13 | |
| COG0702 | 275 | COG0702, COG0702, Predicted nucleoside-diphosphate | 6e-13 | |
| cd05228 | 318 | cd05228, AR_FR_like_1_SDR_e, uncharacterized subgr | 1e-12 | |
| CHL00194 | 317 | CHL00194, ycf39, Ycf39; Provisional | 1e-12 | |
| cd05259 | 282 | cd05259, PCBER_SDR_a, phenylcoumaran benzylic ethe | 5e-10 | |
| cd08947 | 224 | cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptio | 9e-09 | |
| TIGR03466 | 328 | TIGR03466, HpnA, hopanoid-associated sugar epimera | 4e-08 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 4e-08 | |
| cd05231 | 259 | cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcript | 6e-08 | |
| cd05227 | 301 | cd05227, AR_SDR_e, aldehyde reductase, extended (e | 1e-07 | |
| cd05245 | 293 | cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | 2e-07 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 3e-07 | |
| cd05265 | 250 | cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | 7e-07 | |
| pfam01073 | 280 | pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydr | 3e-06 | |
| cd08958 | 293 | cd08958, FR_SDR_e, flavonoid reductase (FR), exten | 1e-04 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 2e-04 | |
| PLN03209 | 576 | PLN03209, PLN03209, translocon at the inner envelo | 2e-04 | |
| cd05193 | 295 | cd05193, AR_like_SDR_e, aldehyde reductase, flavon | 4e-04 | |
| cd05232 | 303 | cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, | 4e-04 | |
| cd05262 | 291 | cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | 5e-04 | |
| cd05241 | 331 | cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid d | 6e-04 | |
| cd05267 | 203 | cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | 8e-04 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 643 bits (1660), Expect = 0.0
Identities = 316/447 (70%), Positives = 351/447 (78%), Gaps = 5/447 (1%)
Query: 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGT 60
ME SLQS ++TIP+ L++ G I K F Q+L+FP K H RKL+ D KAQASG
Sbjct: 1 MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGA 60
Query: 61 INICSEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
S A+ A P + D+KD++LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS QRAE+L
Sbjct: 61 TKFSSAAIEAIPKELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESL 120
Query: 121 VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD 180
VQSVKQMKLD E G QPVE LE+VECDLEK QI PALGNASVVICCIGASEKEVFD
Sbjct: 121 VQSVKQMKLDVE----GTQPVEKLEIVECDLEKPDQIGPALGNASVVICCIGASEKEVFD 176
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240
+TGPYRID+ ATKNLVDAAT+AKVNHFI+V+SLGTNK GFPAAILNLFWGVL WKRKAEE
Sbjct: 177 VTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE 236
Query: 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300
ALIASGLPYTIVRPGGMERPTDAYKETHN+TLS+EDTLFGGQVSNLQVAEL+ACMAKNR
Sbjct: 237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRR 296
Query: 301 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPI 360
LSYCKVVEVIAETTAPLTPMEELLAKIPSQR PKES A + P +K + E S PI
Sbjct: 297 LSYCKVVEVIAETTAPLTPMEELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPI 356
Query: 361 TEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTT-PGASKTSDIDAKPVASKSTPLS 419
EEP Q KA V PLSPYT+YEDLKP +SP PTP ++ P +SK+ D AKP P
Sbjct: 357 EEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPASSKSVDAVAKPAEPDVVPSP 416
Query: 420 EPSSTTTKKEAPKSEMKKTEPLSPYIA 446
+S + E + E KKT PLSPY
Sbjct: 417 GSASNVPEVEPAQVEAKKTRPLSPYAR 443
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Length = 576 |
| >gnl|CDD|187554 cd05243, SDR_a5, atypical (a) SDRs, subgroup 5 | Back alignment and domain information |
|---|
Score = 192 bits (491), Expect = 2e-59
Identities = 81/230 (35%), Positives = 103/230 (44%), Gaps = 29/230 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATGKVG VRELL G++VRA VR +AE L +
Sbjct: 3 LVVGATGKVGRHVVRELLDRGYQVRALVRDPSQAEKLEAAG------------------- 43
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E+V DL + AL VI G+ K +D+ NL+DAA A
Sbjct: 44 AEVVVGDLTDAESLAAALEGIDAVISAAGSGGK---GGPRTEAVDYDGNINLIDAAKKAG 100
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
V F++VSS+G +K P L L KRKAE+ L ASGL YTIVRPGG+ TD
Sbjct: 101 VKRFVLVSSIGADKPSHP---LEALGPYLDAKRKAEDYLRASGLDYTIVRPGGL---TDD 154
Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313
T + L + T G +S VAE+LA + K E+
Sbjct: 155 PAGTGRVVLGGDGTRLDGPISRADVAEVLAEALDT-PAAIGKTFELGGGD 203
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This subgroup contains atypical SDRs, some of which are identified as putative NAD(P)-dependent epimerases, one as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif that is very similar to the extended SDRs, GXXGXXG, and binds NADP. Generally, this subgroup has poor conservation of the active site tetrad; however, individual sequences do contain matches to the YXXXK active site motif, the upstream Ser, and there is a highly conserved Asp in place of the usual active site Asn throughout the subgroup. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
| >gnl|CDD|215072 PLN00141, PLN00141, Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Score = 132 bits (333), Expect = 8e-36
Identities = 101/271 (37%), Positives = 139/271 (51%), Gaps = 36/271 (13%)
Query: 70 ATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKL 129
A+ A++ FVAGATG+ G R V +LL GF V+AGVR V +A
Sbjct: 7 ASEEDAENVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKA------------ 54
Query: 130 DGELANKGIQPVE-MLELVECDL-EKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYR 186
K P + L++V D+ E ++ A+G+ S VIC G + FD P++
Sbjct: 55 ------KTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATGF--RRSFDPFAPWK 106
Query: 187 IDFQATKNLVDAATIAKVNHFIMVSSLGTN-----KFGFPAAI-LNLFWGVLLWKRKAEE 240
+D T NLV+A A V FI+VSS+ N + PA I LNLF L+ K +AE+
Sbjct: 107 VDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLFGLTLVAKLQAEK 166
Query: 241 ALIASGLPYTIVRPGGM-ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299
+ SG+ YTIVRPGG+ P T NI + EDTL+ G +S QVAE +A A
Sbjct: 167 YIRKSGINYTIVRPGGLTNDPP-----TGNIVMEPEDTLYEGSISRDQVAE-VAVEALLC 220
Query: 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330
S KVVE++A AP ++L A I +
Sbjct: 221 PESSYKVVEIVARADAPKRSYKDLFASIKQK 251
|
Length = 251 |
| >gnl|CDD|222146 pfam13460, NAD_binding_10, NADH(P)-binding | Back alignment and domain information |
|---|
Score = 104 bits (262), Expect = 2e-26
Identities = 55/176 (31%), Positives = 70/176 (39%), Gaps = 36/176 (20%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATGK G R V+ELL G +V A R+ +A P +
Sbjct: 3 VIGATGKTGRRLVKELLARGHQVTALSRNPSKA----------------------PAPGV 40
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
V+ DL + AL V+ GA D K+L+DAA A V
Sbjct: 41 TPVQKDLFDLADLAEALAGVDAVVDAFGARPD-----------DSDGVKHLLDAAARAGV 89
Query: 205 NHFIMVSSLGT---NKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
++VS+ G F LF K AEE L ASGL +TIVRPG +
Sbjct: 90 RRIVVVSAAGLYRDEPGTFRLDDAPLFPPYARAKAAAEELLRASGLDWTIVRPGAL 145
|
Length = 182 |
| >gnl|CDD|187537 cd05226, SDR_e_a, Extended (e) and atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 91.7 bits (228), Expect = 9e-22
Identities = 55/176 (31%), Positives = 73/176 (41%), Gaps = 27/176 (15%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ GATG +G RELL+ G V VR+ +R Q E
Sbjct: 1 ILILGATGFIGRALARELLEQGHEVTLLVRNTKRLSKEDQ-------------------E 41
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
+ +VE DL + A+ VVI GA D +D + T+N+++AA A
Sbjct: 42 PVAVVEGDLRDLDSLSDAVQGVDVVIHLAGAPR----DTRDFCEVDVEGTRNVLEAAKEA 97
Query: 203 KVNHFIMVSSLGTNKFGFPAA--ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
V HFI +SSLG + L K K E L + LPYTIVRPG
Sbjct: 98 GVKHFIFISSLGAYGDLHEETEPSPSSP--YLAVKAKTEAVLREASLPYTIVRPGV 151
|
Extended or atypical short-chain dehydrogenases/reductases (SDRs, aka tyrosine-dependent oxidoreductases) are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 176 |
| >gnl|CDD|187578 cd05269, TMR_SDR_a, triphenylmethane reductase (TMR)-like proteins, NMRa-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 85.8 bits (213), Expect = 7e-19
Identities = 47/172 (27%), Positives = 68/172 (39%), Gaps = 39/172 (22%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATGK+G+ V LL V A VR+ ++A A G+
Sbjct: 3 VTGATGKLGTAVVELLLAKVASVVALVRNPEKA-------------KAFAADGV------ 43
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATIAK 203
E+ + D + +E A + I+ D Q KN +DAA A
Sbjct: 44 EVRQGDYDDPETLERAFEGVDR-----------LLLISPSDLEDRIQQHKNFIDAAKQAG 92
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
V H + +S+ G + + L E+ L ASG+PYTI+RPG
Sbjct: 93 VKHIVYLSASGAD----EDSPF-LLAR---DHGATEKYLEASGIPYTILRPG 136
|
TMR is an atypical NADP-binding protein of the SDR family. It lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Proteins in this subgroup however, are more similar in length to the classical SDRs. TMR was identified as a reducer of triphenylmethane dyes, important environmental pollutants. This subgroup also includes Escherichia coli NADPH-dependent quinine oxidoreductase (QOR2), which catalyzes two-electron reduction of quinone; but is unlikely to play a major role in protecting against quinone cytotoxicity. Atypical SDRs are distinct from classical SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 272 |
| >gnl|CDD|187555 cd05244, BVR-B_like_SDR_a, biliverdin IX beta reductase (BVR-B, aka flavin reductase)-like proteins; atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 76.9 bits (190), Expect = 2e-16
Identities = 51/211 (24%), Positives = 74/211 (35%), Gaps = 47/211 (22%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ GATG+ GS VRE L G V A VR + K L
Sbjct: 4 IIGATGRTGSAIVREALARGHEVTALVRDPAKLP-------------AEHEK-------L 43
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
++V+ D+ ++ AL VI +G P + + T+N+V A A V
Sbjct: 44 KVVQGDVLDLEDVKEALEGQDAVISALGTRNDL-----SPTTLHSEGTRNIVSAMKAAGV 98
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLL----WKR------KAEEALIASGLPYTIVRP 254
I+V G+ + L LL +R + + L SGL +T VRP
Sbjct: 99 KRLIVVGGAGS---LDDRPKVTLVLDTLLFPPALRRVAEDHARMLKVLRESGLDWTAVRP 155
Query: 255 ---------GGMERPTDAYKETHNITLSQED 276
GG R +S+ D
Sbjct: 156 PALFDGGATGGYYRVELLVDAKGGSRISRAD 186
|
Human BVR-B catalyzes pyridine nucleotide-dependent production of bilirubin-IX beta during fetal development; in the adult BVR-B has flavin and ferric reductase activities. Human BVR-B catalyzes the reduction of FMN, FAD, and riboflavin. Recognition of flavin occurs mostly by hydrophobic interactions, accounting for the broad substrate specificity. Atypical SDRs are distinct from classical SDRs. BVR-B does not share the key catalytic triad, or conserved tyrosine typical of SDRs. The glycine-rich NADP-binding motif of BVR-B is GXXGXXG, which is similar but not identical to the pattern seen in extended SDRs. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 207 |
| >gnl|CDD|187561 cd05251, NmrA_like_SDR_a, NmrA (a transcriptional regulator) and HSCARG (an NADPH sensor) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 76.5 bits (189), Expect = 6e-16
Identities = 57/178 (32%), Positives = 69/178 (38%), Gaps = 44/178 (24%)
Query: 85 VAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATGK G VR LLK GF+VRA R LA G+
Sbjct: 3 VFGATGKQGGSVVRALLKDPGFKVRALTRDPSS-----------PAAKALAAPGV----- 46
Query: 144 LELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDAA 199
E+V+ DL+ +E AL V E E+ Q KN+VDAA
Sbjct: 47 -EVVQGDLDDPESLEAALKGVYGVFLVTDFWEAGGEDEIA----------QG-KNVVDAA 94
Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPG 255
A V HF+ S K + KA EE + ASGLP TI+RP
Sbjct: 95 KRAGVQHFVFSSVPDVEKLTLAVPH---------FDSKAEVEEYIRASGLPATILRPA 143
|
NmrA and HSCARG like proteins. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 242 |
| >gnl|CDD|191263 pfam05368, NmrA, NmrA-like family | Back alignment and domain information |
|---|
Score = 75.0 bits (185), Expect = 2e-15
Identities = 56/174 (32%), Positives = 68/174 (39%), Gaps = 36/174 (20%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG G VR LK G VRA VR + L +S+K V
Sbjct: 3 VFGATGYQGGSVVRASLKAGHPVRALVRDPKSE--LAKSLKA------------AGV--- 45
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIG-ASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
ELVE DL+ + AL VV G KE+ D K L DAA A
Sbjct: 46 ELVEGDLDDHESLVEALKGVDVVFSVTGFWLSKEIED-----------GKKLADAAKEAG 94
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPYTIVRPG 255
V HFI S G + + V + K + E + A G+PYT V G
Sbjct: 95 VKHFIP-SEFGND----VDRSNGVEPAVPHFDSKAEVERYIRALGIPYTFVYAG 143
|
NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families. Length = 232 |
| >gnl|CDD|187579 cd05271, NDUFA9_like_SDR_a, NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, subunit 9, 39 kDa, (NDUFA9) -like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 73.4 bits (181), Expect = 1e-14
Identities = 50/178 (28%), Positives = 71/178 (39%), Gaps = 30/178 (16%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG +G V L K G +V R A +++ + G+L +
Sbjct: 5 VFGATGFIGRYVVNRLAKRGSQVIVPYRCEAYA-------RRLLVMGDLG--QVLF---- 51
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIAK 203
VE DL I AL + VVI +G E + F + + + L AA A
Sbjct: 52 --VEFDLRDDESIRKALEGSDVVINLVGRLYETKNFSF---EDVHVEGPERLAKAAKEAG 106
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GME 258
V I +S+LG + P+ L K + EEA+ + TIVRP G E
Sbjct: 107 VERLIHISALGADANS-PSKYLRS-------KAEGEEAVREAFPEATIVRPSVVFGRE 156
|
This subgroup of extended SDR-like proteins are atypical SDRs. They have a glycine-rich NAD(P)-binding motif similar to the typical SDRs, GXXGXXG, and have the YXXXK active site motif (though not the other residues of the SDR tetrad). Members identified include NDUFA9 (mitochondrial) and putative nucleoside-diphosphate-sugar epimerase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 273 |
| >gnl|CDD|187560 cd05250, CC3_like_SDR_a, CC3(TIP30)-like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 69.6 bits (171), Expect = 1e-13
Identities = 50/174 (28%), Positives = 69/174 (39%), Gaps = 27/174 (15%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
A V GATG VG +RELLK + + V ++ R + K K +Q V
Sbjct: 3 ALVLGATGLVGKHLLRELLKSPYYSK--VTAIVRRKLTFPEAK---------EKLVQIVV 51
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
D E+ + A N V CC+G + K+ ++D L A A
Sbjct: 52 -------DFERLDEYLEAFQNPDVGFCCLGTTRKKAGSQENFRKVDHDYVLKLAKLAKAA 104
Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPY-TIVRPG 255
V HF++VSSLG + + L K + E L G TI RPG
Sbjct: 105 GVQHFLLVSSLGADP--------KSSFLYLKVKGEVERDLQKLGFERLTIFRPG 150
|
Atypical SDRs in this subgroup include CC3 (also known as TIP30) which is implicated in tumor suppression. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine rich NAD(P)-binding motif that resembles the extended SDRs, and have an active site triad of the SDRs (YXXXK and upstream Ser), although the upstream Asn of the usual SDR active site is substituted with Asp. For CC3, the Tyr of the triad is displaced compared to the usual SDRs and the protein is monomeric, both these observations suggest that the usual SDR catalytic activity is not present. NADP appears to serve an important role as a ligand, and may be important in the interaction with other macromolecules. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 214 |
| >gnl|CDD|178263 PLN02657, PLN02657, 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Score = 70.2 bits (172), Expect = 4e-13
Identities = 55/198 (27%), Positives = 80/198 (40%), Gaps = 33/198 (16%)
Query: 65 SEAVGATPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSV 124
+ A A ++ D V GATG +G VREL++ G+ V A R
Sbjct: 45 TAAAAAQSFRSKEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRG----- 99
Query: 125 KQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNAS----VVICCIGASEKEVFD 180
K E K + E+V D+ + L + VV+ C+ + V D
Sbjct: 100 ---KNGKEDTKKELP---GAEVVFGDVTDADSLRKVLFSEGDPVDVVVSCLASRTGGVKD 153
Query: 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK--FGFPAAILNLFWGVLLWKRKA 238
++ID+QATKN +DA HF+++S++ K F A K K
Sbjct: 154 ---SWKIDYQATKNSLDAGREVGAKHFVLLSAICVQKPLLEFQRA-----------KLKF 199
Query: 239 EEALIA--SGLPYTIVRP 254
E L A S Y+IVRP
Sbjct: 200 EAELQALDSDFTYSIVRP 217
|
Length = 390 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 69.2 bits (169), Expect = 6e-13
Identities = 45/188 (23%), Positives = 61/188 (32%), Gaps = 35/188 (18%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G G +GS V LL G VR R + L+ V
Sbjct: 4 LVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPLLSGV------------------- 44
Query: 144 LELVECDLEKRVQIEPAL-GNASVVI---CCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
E V DL R ++ G VI + D ++ T NL++AA
Sbjct: 45 -EFVVLDLTDRDLVDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA 103
Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-------KRKAEEAL----IASGLP 248
A V F+ SS+ P ++ G K AE+ L GLP
Sbjct: 104 RAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNPYGVSKLAAEQLLRAYARLYGLP 163
Query: 249 YTIVRPGG 256
I+RP
Sbjct: 164 VVILRPFN 171
|
Length = 314 |
| >gnl|CDD|223774 COG0702, COG0702, Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 68.4 bits (167), Expect = 6e-13
Identities = 47/173 (27%), Positives = 63/173 (36%), Gaps = 33/173 (19%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG VG VRELL G VRA VR+ + A L G++ V
Sbjct: 5 VTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAAL--------------AGGVEVVLG- 49
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
DL + V+ G + + A +AA A V
Sbjct: 50 -----DLRDPKSLVAGAKGVDGVLLISGLLDGSDAFRA----VQVTAVVRAAEAAG-AGV 99
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGM 257
H + +S LG + A+ L K E AL +SG+PYT +R
Sbjct: 100 KHGVSLSVLGAD----AASPSALAR----AKAAVEAALRSSGIPYTTLRRAAF 144
|
Length = 275 |
| >gnl|CDD|187539 cd05228, AR_FR_like_1_SDR_e, uncharacterized subgroup of aldehyde reductase and flavonoid reductase related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 68.1 bits (167), Expect = 1e-12
Identities = 52/199 (26%), Positives = 70/199 (35%), Gaps = 44/199 (22%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GATG +GS VR LL G+RVRA VRS A L
Sbjct: 1 ILVTGATGFLGSNLVRALLAQGYRVRALVRSGSDAVLL-------------------DGL 41
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YRIDFQATKNLVD 197
+E+VE DL + A+ V + YR + + T+N++D
Sbjct: 42 PVEVVEGDLTDAASLAAAMKGCDRVFHLAA-----FTSLWAKDRKELYRTNVEGTRNVLD 96
Query: 198 AATIAKVNHFIMVSSLGTNKFGFPA-AILNLFWGVLLW---------KRKAEEAL---IA 244
AA A V + SS+ G P ++ K AE + A
Sbjct: 97 AALEAGVRRVVHTSSIAA--LGGPPDGRIDETTPWNERPFPNDYYRSKLLAELEVLEAAA 154
Query: 245 SGLPYTIVRPGGMERPTDA 263
GL IV P + P D
Sbjct: 155 EGLDVVIVNPSAVFGPGDE 173
|
This subgroup contains proteins of unknown function related to aldehyde reductase and flavonoid reductase of the extended SDR-type. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 318 |
| >gnl|CDD|177093 CHL00194, ycf39, Ycf39; Provisional | Back alignment and domain information |
|---|
Score = 67.7 bits (166), Expect = 1e-12
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 34/174 (19%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG +G + VR+ L G++VR VR++++A L K G
Sbjct: 5 VIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-------KEWGA------------ 45
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
ELV DL + P+ + +I AS D+ +ID+ L++AA AK+
Sbjct: 46 ELVYGDLSLPETLPPSFKGVTAII---DASTSRPSDLYNAKQIDWDGKLALIEAAKAAKI 102
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA--EEALIASGLPYTIVRPGG 256
FI S L ++ + + L K K+ E+ L SG+PYTI R G
Sbjct: 103 KRFIFFSILNAEQYPY----------IPLMKLKSDIEQKLKKSGIPYTIFRLAG 146
|
Length = 317 |
| >gnl|CDD|187569 cd05259, PCBER_SDR_a, phenylcoumaran benzylic ether reductase (PCBER) like, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 59.6 bits (145), Expect = 5e-10
Identities = 45/176 (25%), Positives = 62/176 (35%), Gaps = 42/176 (23%)
Query: 85 VAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+AGATG +G V LL GF V R + N E G++
Sbjct: 4 IAGATGTLGGPIVSALLASPGFTVTVLTRPSSTSSN------------EFQPSGVK---- 47
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+V D + AL VI +G + I Q L+DAA A
Sbjct: 48 --VVPVDYASHESLVAALKGVDAVISALGGAA-----------IGDQ--LKLIDAAIAAG 92
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE--EALIAS--GLPYTIVRPG 255
V FI ++FG + + L+ K + L A GLP+T V G
Sbjct: 93 VKRFI------PSEFGVDYDRIGALPLLDLFDEKRDVRRYLRAKNAGLPWTYVSTG 142
|
PCBER and pinoresinol-lariciresinol reductases are NADPH-dependent aromatic alcohol reductases, and are atypical members of the SDR family. Other proteins in this subgroup are identified as eugenol synthase. These proteins contain an N-terminus characteristic of NAD(P)-binding proteins and a small C-terminal domain presumed to be involved in substrate binding, but they do not have the conserved active site Tyr residue typically found in SDRs. Numerous other members have unknown functions. The glycine rich NADP-binding motif in this subgroup is of 2 forms: GXGXXG and G[GA]XGXXG; it tends to be atypical compared with the forms generally seen in classical or extended SDRs. The usual SDR active site tetrad is not present, but a critical active site Lys at the usual SDR position has been identified in various members, though other charged and polar residues are found at this position in this subgroup. Atypical SDR-related proteins retain the Rossmann fold of the SDRs, but have limited sequence identity and generally lack the catalytic properties of the archetypical members. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 282 |
| >gnl|CDD|187651 cd08947, NmrA_TMR_like_SDR_a, NmrA (a transcriptional regulator), HSCARG (an NADPH sensor), and triphenylmethane reductase (TMR) like proteins, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 55.2 bits (133), Expect = 9e-09
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 43/175 (24%)
Query: 85 VAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG+ G +R LL G +VRA VR+V++A LA++G+
Sbjct: 3 VTGATGQQGGSVIRHLLAKGASQVRAVVRNVEKA-------------ATLADQGV----- 44
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAAT 200
E+ + D + ++ A AS +F ITGP+ + KN+ DAA
Sbjct: 45 -EVRQGDYNQPELLQKAFAGASK-----------LFIITGPHYDNTLEIKQGKNVADAAR 92
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
A V H + S G A L L E A+ +G+PYT +R G
Sbjct: 93 RAGVKH---IYSTGYAFAEESAI--PLAHVKLA----VEYAIRTTGIPYTFLRNG 138
|
Atypical SDRs belonging to this subgroup include NmrA, HSCARG, and TMR, these proteins bind NAD(P) but they lack the usual catalytic residues of the SDRs. Atypical SDRs are distinct from classical SDRs. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. TMR, an NADP-binding protein, lacks the active site residues of the SDRs but has a glycine rich NAD(P)-binding motif that matches the extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 224 |
| >gnl|CDD|163279 TIGR03466, HpnA, hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 4e-08
Identities = 54/185 (29%), Positives = 68/185 (36%), Gaps = 32/185 (17%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GATG VGS VR LL+ G VR VR NL LD
Sbjct: 3 VLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE------GLDV----------- 45
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
E+VE DL + A+ + D Y + + T+NL+ AA A
Sbjct: 46 --EIVEGDLRDPASLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEA 103
Query: 203 KVNHFIMVSS---LGTNKFGFPA-----AILNLFWGV-----LLWKRKAEEALIASGLPY 249
V + SS LG G PA + L+ G L ++ A E GLP
Sbjct: 104 GVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHYKRSKFLAEQAALEMAAEKGLPV 163
Query: 250 TIVRP 254
IV P
Sbjct: 164 VIVNP 168
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnA was assigned. Hopanoids are known to be components of the plasma membrane and to have polar sugar head groups in Z. mobilis and other species. Length = 328 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 53.9 bits (130), Expect = 4e-08
Identities = 46/200 (23%), Positives = 79/200 (39%), Gaps = 53/200 (26%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
FV G TG +G V+ LL+ GF+V VRS E+L ++ ++++ G A +
Sbjct: 2 FVTGGTGFLGRHLVKRLLENGFKVLVLVRS----ESLGEAHERIEEAGLEA-------DR 50
Query: 144 LELVECDLEKRV------QIEPALGNASVVICCIGASEKEVFDITGP----YRIDFQATK 193
+ ++E DL + G VI C +D P +R + T+
Sbjct: 51 VRVLEGDLTQPNLGLSAAASRELAGKVDHVIHCAA-----SYDFQAPNEDAWRTNIDGTE 105
Query: 194 NLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAE 239
++++ A + F VS+ A + G + + KAE
Sbjct: 106 HVLELAARLDIQRFHYVST---------AYVAGNREGNIRETELNPGQNFKNPYEQSKAE 156
Query: 240 -EALI---ASGLPYTIVRPG 255
E L+ A+ +P T+ RP
Sbjct: 157 AEQLVRAAATQIPLTVYRPS 176
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187542 cd05231, NmrA_TMR_like_1_SDR_a, NmrA (a transcriptional regulator) and triphenylmethane reductase (TMR) like proteins, subgroup 1, atypical (a) SDRs | Back alignment and domain information |
|---|
Score = 53.5 bits (129), Expect = 6e-08
Identities = 47/171 (27%), Positives = 68/171 (39%), Gaps = 32/171 (18%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG++GS+ LL+ G VRA VRS +RA LA +G
Sbjct: 3 VTGATGRIGSKVATTLLEAGRPVRALVRSDERAA-------------ALAARGA------ 43
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
E+V DL+ + AL V + D Y QA + A A V
Sbjct: 44 EVVVGDLDDPAVLAAALAGVDAVFFLAPPAPTA--DARPGYV---QAAEAFASALREAGV 98
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
+ +SS+G + P+ ++ W E+ L +GLP +RP
Sbjct: 99 KRVVNLSSVGAD-PESPSGLIRGHW-------LMEQVLNWAGLPVVHLRPA 141
|
Atypical SDRs related to NMRa, TMR, and HSCARG (an NADPH sensor). This subgroup resembles the SDRs and has a partially conserved characteristic [ST]GXXGXXG NAD-binding motif, but lacks the conserved active site residues. NmrA is a negative transcriptional regulator of various fungi, involved in the post-translational modulation of the GATA-type transcription factor AreA. NmrA lacks the canonical GXXGXXG NAD-binding motif and has altered residues at the catalytic triad, including a Met instead of the critical Tyr residue. NmrA may bind nucleotides but appears to lack any dehydrogenase activity. HSCARG has been identified as a putative NADP-sensing molecule, and redistributes and restructures in response to NADPH/NADP ratios. Like NmrA, it lacks most of the active site residues of the SDR family, but has an NAD(P)-binding motif similar to the extended SDR family, GXXGXXG. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Atypical SDRs are distinct from classical SDRs. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 259 |
| >gnl|CDD|187538 cd05227, AR_SDR_e, aldehyde reductase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 52.7 bits (127), Expect = 1e-07
Identities = 42/141 (29%), Positives = 59/141 (41%), Gaps = 24/141 (17%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
L V GATG + S V +LLK G++VR VRS+ ++ L +K +
Sbjct: 1 LVLVTGATGFIASHIVEQLLKAGYKVRGTVRSLSKSAKLKALLKAAGYNDR--------- 51
Query: 142 EMLELVECDL-EKRVQIEPALGNASVVICCIGASEKEVFDITGPYR----IDF--QATKN 194
LE V D + AL VI AS F TGP ID + T N
Sbjct: 52 --LEFVIVDDLTAPNAWDEALKGVDYVIHV--AS---PFPFTGPDAEDDVIDPAVEGTLN 104
Query: 195 LVDAA-TIAKVNHFIMVSSLG 214
+++AA V ++ SS+
Sbjct: 105 VLEAAKAAGSVKRVVLTSSVA 125
|
This subgroup contains aldehyde reductase of the extended SDR-type and related proteins. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it has an NADP-binding motif consensus that is slightly different from the canonical SDR form and lacks the Asn of the extended SDR active site tetrad. Aldehyde reductase I catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 301 |
| >gnl|CDD|187556 cd05245, SDR_a2, atypical (a) SDRs, subgroup 2 | Back alignment and domain information |
|---|
Score = 52.0 bits (125), Expect = 2e-07
Identities = 44/173 (25%), Positives = 63/173 (36%), Gaps = 34/173 (19%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GATG VG R V LL+ G +VRA VRS ++ + S E +
Sbjct: 3 VTGATGYVGGRLVPRLLQEGHQVRALVRSPEKLADRPWS------------------ERV 44
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIA 202
+V DLE + AL + + S + + D +A +N AA A
Sbjct: 45 TVVRGDLEDPESLRAALEGIDTAYYLVHSMGSGGDFEE------ADRRAARNFARAARAA 98
Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
V I + L L + + E L A G+P T +R
Sbjct: 99 GVKRIIYLGGLIPKGEELSPH--------LRSRAEVGEILRAGGVPVTELRAA 143
|
This subgroup contains atypical SDRs, one member is identified as Escherichia coli protein ybjT, function unknown. Atypical SDRs are distinct from classical SDRs. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that generally matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 50.7 bits (122), Expect = 3e-07
Identities = 32/137 (23%), Positives = 45/137 (32%), Gaps = 30/137 (21%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V G TG +GS VR LL+ G+ V R +
Sbjct: 1 ILVTGGTGFIGSHLVRRLLQEGYEVIVLGRRRRSESLNTGR------------------- 41
Query: 143 MLELVECDLEKRVQIEPALGNAS---VVICCIGASEKEVF-DITGP---YRIDFQATKNL 195
+ E DL +E L V+ A++ V P R + T L
Sbjct: 42 -IRFHEGDLTDPDALERLLAEVQPDAVIHL---AAQSGVGASFEDPADFIRANVLGTLRL 97
Query: 196 VDAATIAKVNHFIMVSS 212
++AA A V F+ SS
Sbjct: 98 LEAARRAGVKRFVFASS 114
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|187575 cd05265, SDR_a1, atypical (a) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 50.0 bits (120), Expect = 7e-07
Identities = 47/203 (23%), Positives = 68/203 (33%), Gaps = 58/203 (28%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G T +G V ELL G V + N+G ++
Sbjct: 5 IIGGTRFIGKALVEELLAAGHDV------------------------TVFNRGRTKPDLP 40
Query: 145 ELVE---CDLEKRVQIEPALGNAS--VVICCIGASEKEVFDITGPYRIDFQATKNLVDAA 199
E VE D R +E LG VV+ I + ++V A K
Sbjct: 41 EGVEHIVGDRNDRDALEELLGGEDFDVVVDTIAYTPRQV-------ERALDAFKG----- 88
Query: 200 TIAKVNHFIMVSSLG-----------TNKFGFPAAILNLFWGVL-LWKRKAEEALI-ASG 246
+V +I +SS + P A+ KR AE+ LI A+
Sbjct: 89 ---RVKQYIFISSASVYLKPGRVITESTPLREPDAVGLSDPWDYGRGKRAAEDVLIEAAA 145
Query: 247 LPYTIVRPGGMERPTD-AYKETH 268
PYTIVRP + P D + +
Sbjct: 146 FPYTIVRPPYIYGPGDYTGRLAY 168
|
Atypical SDRs in this subgroup are poorly defined and have been identified putatively as isoflavones reductase, sugar dehydratase, mRNA binding protein etc. Atypical SDRs are distinct from classical SDRs. Members of this subgroup retain the canonical active site triad (though not the upstream Asn found in most SDRs) but have an unusual putative glycine-rich NAD(P)-binding motif, GGXXXXG, in the usual location. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 250 |
| >gnl|CDD|216283 pfam01073, 3Beta_HSD, 3-beta hydroxysteroid dehydrogenase/isomerase family | Back alignment and domain information |
|---|
Score = 48.1 bits (115), Expect = 3e-06
Identities = 35/148 (23%), Positives = 61/148 (41%), Gaps = 24/148 (16%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V G G +G VR LL+ G ++ VR + +L + + +
Sbjct: 2 VTGGGGFLGRHIVRLLLREG-ELQE-VRVFDLRFS-------PELLEDFSKLQVITY--- 49
Query: 145 ELVECDLEKRVQIEPALGNASVVI--CCIGASEKEV-FDITGPYRIDFQATKNLVDAATI 201
+E D+ + + AL + VVI I + D +++ + T+N++DA
Sbjct: 50 --IEGDVTDKQDLRRALQGSDVVIHTAAIIDVFGKAYRDTI--MKVNVKGTQNVLDACVK 105
Query: 202 AKVNHFIMVSS---LGTNKFGFPAAILN 226
A V + SS +G N +G P I+N
Sbjct: 106 AGVRVLVYTSSMEVVGPNSYGQP--IVN 131
|
The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyzes the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. Length = 280 |
| >gnl|CDD|187661 cd08958, FR_SDR_e, flavonoid reductase (FR), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 36/142 (25%), Positives = 58/142 (40%), Gaps = 31/142 (21%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ---MKLDGELANKGIQPV 141
V GA+G +GS V+ LL+ G+ VRA VR + K ++L+G A
Sbjct: 3 VTGASGFIGSWLVKRLLQRGYTVRATVR------DPGDEKKVAHLLELEG--AK------ 48
Query: 142 EMLELVECDLEKRVQIEPALGNASVVICC-------IGASEKEVFDITGPYRIDFQATKN 194
E L+L + DL + A+ V E+E+ + + T N
Sbjct: 49 ERLKLFKADLLDYGSFDAAIDGCDGVFHVASPVDFDSEDPEEEMIEPA------VKGTLN 102
Query: 195 LVDAATIAK-VNHFIMVSSLGT 215
+++A AK V + SS+
Sbjct: 103 VLEACAKAKSVKRVVFTSSVAA 124
|
This subgroup contains FRs of the extended SDR-type and related proteins. These FRs act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites; they have the characteristic active site triad of the SDRs (though not the upstream active site Asn) and a NADP-binding motif that is very similar to the typical extended SDR motif. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 2e-04
Identities = 26/83 (31%), Positives = 33/83 (39%), Gaps = 4/83 (4%)
Query: 316 PLTPMEELLAKIPSQRAEPKESIA--PEKSDPAASKSMISEESSAPITEEPVQTKAKVTD 373
PL+P P P + S K S +A E+
Sbjct: 496 PLSPYAVYDDLKPPTSPSPAAPVGKVAPSSTNEVVKVGNSAPPTALADEQ--HHAQPKPR 553
Query: 374 PLSPYTSYEDLKPSSSPSPTPST 396
PLSPYT YEDLKP +SP+P+P
Sbjct: 554 PLSPYTMYEDLKPPTSPTPSPVL 576
|
Length = 576 |
| >gnl|CDD|178748 PLN03209, PLN03209, translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 2e-04
Identities = 38/149 (25%), Positives = 60/149 (40%), Gaps = 25/149 (16%)
Query: 305 KVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPIT-EE 363
+ +V A+ T PL+P ++ + K +P + P +S SS P +
Sbjct: 426 EPAQVEAKKTRPLSPY--------ARYEDLKPPTSPSPTAPTGVSPSVSSTSSVPAVPDT 477
Query: 364 PVQTKAKVTD--------PLSPYTSYEDLKPSSSPSPTPSTTPGASKTSDIDAKPVASKS 415
T A PLSPY Y+DLKP +SPSP + + +S + V + +
Sbjct: 478 APATAATDAAAPPPANMRPLSPYAVYDDLKPPTSPSPA-APVGKVAPSSTNEVVKVGNSA 536
Query: 416 TPLSEPSSTTTKKEAPKSEMKKTEPLSPY 444
P + + P+ PLSPY
Sbjct: 537 PPTALADEQHHAQPKPR-------PLSPY 558
|
Length = 576 |
| >gnl|CDD|187536 cd05193, AR_like_SDR_e, aldehyde reductase, flavonoid reductase, and related proteins, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 4e-04
Identities = 37/134 (27%), Positives = 55/134 (41%), Gaps = 12/134 (8%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GA+G V S V +LL+ G++VRA VR + VK++ +L K +
Sbjct: 1 VLVTGASGFVASHVVEQLLERGYKVRATVRDPSK-------VKKVNHLLDLDAKPGR--- 50
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
LEL DL + + + V D + T N + AA A
Sbjct: 51 -LELAVADLTDEQSFDEVIKGCAGVFHVATPVSFSSKDPNEVIKPAIGGTLNALKAAAAA 109
Query: 203 K-VNHFIMVSSLGT 215
K V F++ SS G+
Sbjct: 110 KSVKRFVLTSSAGS 123
|
This subgroup contains aldehyde reductase and flavonoid reductase of the extended SDR-type and related proteins. Proteins in this subgroup have a complete SDR-type active site tetrad and a close match to the canonical extended SDR NADP-binding motif. Aldehyde reductase I (aka carbonyl reductase) is an NADP-binding SDR; it catalyzes the NADP-dependent reduction of ethyl 4-chloro-3-oxobutanoate to ethyl (R)-4-chloro-3-hydroxybutanoate. The related flavonoid reductases act in the NADP-dependent reduction of flavonoids, ketone-containing plant secondary metabolites. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 295 |
| >gnl|CDD|187543 cd05232, UDP_G4E_4_SDR_e, UDP-glucose 4 epimerase, subgroup 4, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 4e-04
Identities = 45/186 (24%), Positives = 66/186 (35%), Gaps = 43/186 (23%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GA G +G V +LL G VR VR+ + AE V +
Sbjct: 4 VTGANGFIGRALVDKLLSRGEEVRIAVRNAENAE--------------------PSVVLA 43
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP-----YR-IDFQATKNLVDA 198
EL + D V+ A+ V + G YR ++ + T+ L A
Sbjct: 44 ELPDIDSFTD-----LFLGVDAVVHL--AARVHVMNDQGADPLSDYRKVNTELTRRLARA 96
Query: 199 ATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL------LWKRKAEEALIA----SGLP 248
A V F+ +SS+ N G A + K +AE AL+ G+
Sbjct: 97 AARQGVKRFVFLSSVKVNGEGTVGAPFDETDPPAPQDAYGRSKLEAERALLELGASDGME 156
Query: 249 YTIVRP 254
I+RP
Sbjct: 157 VVILRP 162
|
UDP-glucose 4 epimerase (aka UDP-galactose-4-epimerase), is a homodimeric extended SDR. It catalyzes the NAD-dependent conversion of UDP-galactose to UDP-glucose, the final step in Leloir galactose synthesis. This subgroup is comprised of bacterial proteins, and includes the Staphylococcus aureus capsular polysaccharide Cap5N, which may have a role in the synthesis of UDP-N-acetyl-d-fucosamine. This subgroup has the characteristic active site tetrad and NAD-binding motif of the extended SDRs. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 303 |
| >gnl|CDD|187572 cd05262, SDR_a7, atypical (a) SDRs, subgroup 7 | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 5e-04
Identities = 18/37 (48%), Positives = 20/37 (54%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120
FV GATG +GS VREL+ G V RS A L
Sbjct: 4 FVTGATGFIGSAVVRELVAAGHEVVGLARSDAGAAKL 40
|
This subgroup contains atypical SDRs of unknown function. Members of this subgroup have a glycine-rich NAD(P)-binding motif consensus that matches the extended SDRs, TGXXGXXG, but lacks the characteristic active site residues of the SDRs. This subgroup has basic residues (HXXXR) in place of the active site motif YXXXK, these may have a catalytic role. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 291 |
| >gnl|CDD|187552 cd05241, 3b-HSD-like_SDR_e, 3beta-hydroxysteroid dehydrogenases (3b-HSD)-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 41.3 bits (97), Expect = 6e-04
Identities = 30/137 (21%), Positives = 52/137 (37%), Gaps = 25/137 (18%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V G +G G R V++LL+ R VRS A +++
Sbjct: 2 VLVTGGSGFFGERLVKQLLE---RGGTYVRSFDIAP-PGEALSA------------WQHP 45
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCI----GASEKEVFDITGPYRIDFQATKNLVDA 198
+E ++ D+ R +E AL A V A ++++ ++ T+N++DA
Sbjct: 46 NIEFLKGDITDRNDVEQALSGADCVFHTAAIVPLAGPRDLYWE-----VNVGGTQNVLDA 100
Query: 199 ATIAKVNHFIMVSSLGT 215
V F+ SS
Sbjct: 101 CQRCGVQKFVYTSSSSV 117
|
Extended SDR family domains belonging to this subgroup have the characteristic active site tetrad and a fairly well-conserved NAD(P)-binding motif. 3b-HSD catalyzes the NAD-dependent conversion of various steroids, such as pregnenolone to progesterone, or androstenediol to testosterone. This subgroup includes an unusual bifunctional 3b-HSD/C-4 decarboxylase from Arabidopsis thaliana, and Saccharomyces cerevisiae ERG26, a 3b-HSD/C-4 decarboxylase, involved in the synthesis of ergosterol, the major sterol of yeast. It also includes human 3 beta-HSD/HSD3B1 and C(27) 3beta-HSD/ [3beta-hydroxy-delta(5)-C(27)-steroid oxidoreductase; HSD3B7]. C(27) 3beta-HSD/HSD3B7 is a membrane-bound enzyme of the endoplasmic reticulum, that catalyzes the isomerization and oxidation of 7alpha-hydroxylated sterol intermediates, an early step in bile acid biosynthesis. Mutations in the human NSDHL (NAD(P)H steroid dehydrogenase-like protein) cause CHILD syndrome (congenital hemidysplasia with ichthyosiform nevus and limb defects), an X-linked dominant, male-lethal trait. Mutations in the human gene encoding C(27) 3beta-HSD underlie a rare autosomal recessive form of neonatal cholestasis. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid sythase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 331 |
| >gnl|CDD|187577 cd05267, SDR_a6, atypical (a) SDRs, subgroup 6 | Back alignment and domain information |
|---|
Score = 40.0 bits (94), Expect = 8e-04
Identities = 27/116 (23%), Positives = 44/116 (37%), Gaps = 9/116 (7%)
Query: 190 QATKNLVDAATIAKVNHFIMVSSLGTN---KFGFPAAILNLFWGVLLWKRKAEEALIASG 246
Q +N+V A V I +SLG F L RK+ + S
Sbjct: 80 QQAENVVQAMKAVGVKRLIWTTSLGIYDEVPGKFGEWNKEFIGNYLAPYRKSAAVIENSD 139
Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSNLQVAELLACMAKNRSL 301
L YT++RP + + + L+ + F G +VS VA+L+ + +
Sbjct: 140 LDYTLLRPAWLT-----NNDEIDYELTPKGEAFKGTEVSRKSVADLITDIINHPDY 190
|
These atypical SDR family members of unknown function have only a partial match to a prototypical glycine-rich NAD(P)-binding motif consensus, GXXG, which conserves part of the motif of extended SDR. Furthermore, they lack the characteristic active site residues of the SDRs. This subgroup is related to phenylcoumaran benzylic ether reductase, an NADPH-dependent aromatic alcohol reductase. One member is identified as a putative NAD-dependent epimerase/dehydratase. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Atypical SDRs include biliverdin IX beta reductase (BVR-B,aka flavin reductase), NMRa (a negative transcriptional regulator of various fungi), progesterone 5-beta-reductase like proteins, phenylcoumaran benzylic ether and pinoresinol-lariciresinol reductases, phenylpropene synthases, eugenol synthase, triphenylmethane reductase, isoflavone reductases, and others. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. In addition to the Rossmann fold core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids, and typically have a TGXXGXXG cofactor binding motif. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 203 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 446 | |||
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 100.0 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.98 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.97 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.97 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.97 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.97 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.97 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 99.97 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.97 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.97 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.96 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.96 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.96 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.96 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.96 | |
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.96 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.96 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.96 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.96 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.96 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.96 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.96 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.95 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.95 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.95 | |
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.95 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.95 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.95 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.95 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.95 | |
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.95 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.95 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.95 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.95 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.95 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.95 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.95 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.95 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.95 | |
| KOG1203 | 411 | consensus Predicted dehydrogenase [Carbohydrate tr | 99.94 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.94 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.94 | |
| KOG2865 | 391 | consensus NADH:ubiquinone oxidoreductase, NDUFA9/3 | 99.94 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.94 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.94 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.94 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.93 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.93 | |
| PLN02996 | 491 | fatty acyl-CoA reductase | 99.93 | |
| KOG1371 | 343 | consensus UDP-glucose 4-epimerase/UDP-sulfoquinovo | 99.93 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.93 | |
| KOG1430 | 361 | consensus C-3 sterol dehydrogenase/3-beta-hydroxys | 99.93 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.93 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.92 | |
| KOG1429 | 350 | consensus dTDP-glucose 4-6-dehydratase/UDP-glucuro | 99.92 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.91 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.91 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.91 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.9 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.9 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.9 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.9 | |
| KOG0747 | 331 | consensus Putative NAD+-dependent epimerases [Carb | 99.9 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.9 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.89 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 99.89 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.89 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.89 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.89 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.89 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.89 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.89 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 99.89 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.89 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.88 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.88 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 99.88 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.88 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 99.88 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.88 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.88 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.88 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 99.88 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.88 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.87 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.87 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 99.87 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.87 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.87 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.87 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 99.87 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.87 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.87 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.87 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.87 | |
| PRK05717 | 255 | oxidoreductase; Validated | 99.86 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.86 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.86 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.86 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 99.86 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 99.86 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 99.85 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 99.85 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 99.85 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.85 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 99.85 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 99.85 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 99.85 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.85 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 99.85 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 99.85 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.85 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.84 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.84 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.84 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 99.84 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.84 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 99.84 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 99.84 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 99.84 | |
| PRK08643 | 256 | acetoin reductase; Validated | 99.84 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 99.84 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.84 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 99.84 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 99.84 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 99.84 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 99.84 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 99.83 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 99.83 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.83 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 99.83 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 99.83 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 99.83 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.83 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.83 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.83 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 99.83 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 99.83 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 99.82 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 99.82 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.82 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 99.82 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 99.82 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.82 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 99.81 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 99.81 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 99.81 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.81 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 99.81 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 99.81 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 99.81 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.81 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.81 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 99.81 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.81 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.81 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 99.81 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 99.81 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 99.8 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 99.8 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 99.8 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 99.8 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 99.8 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 99.8 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.8 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 99.8 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.79 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 99.79 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 99.79 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.79 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 99.79 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 99.79 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 99.78 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 99.78 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 99.78 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 99.78 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.78 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.78 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 99.78 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.77 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 99.76 | |
| KOG1431 | 315 | consensus GDP-L-fucose synthetase [Carbohydrate tr | 99.76 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 99.76 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 99.76 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 99.76 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 99.76 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 99.76 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 99.75 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 99.75 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 99.75 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 99.74 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.74 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 99.73 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 99.73 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 99.72 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 99.71 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.71 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 99.71 | |
| PLN00015 | 308 | protochlorophyllide reductase | 99.71 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 99.7 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 99.7 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 99.69 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 99.66 | |
| KOG1221 | 467 | consensus Acyl-CoA reductase [Lipid transport and | 99.66 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 99.65 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 99.64 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 99.63 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.59 | |
| KOG4039 | 238 | consensus Serine/threonine kinase TIP30/CC3 [Signa | 99.59 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 99.59 | |
| KOG1611 | 249 | consensus Predicted short chain-type dehydrogenase | 99.57 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 99.56 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 99.55 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 99.54 | |
| KOG4288 | 283 | consensus Predicted oxidoreductase [General functi | 99.54 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 99.51 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 99.49 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 99.47 | |
| KOG2774 | 366 | consensus NAD dependent epimerase [General functio | 99.45 | |
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 99.42 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 99.39 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 99.39 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 99.38 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 99.26 | |
| KOG1372 | 376 | consensus GDP-mannose 4,6 dehydratase [Carbohydrat | 99.26 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 99.25 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.23 | |
| KOG3019 | 315 | consensus Predicted nucleoside-diphosphate sugar e | 99.14 | |
| KOG1204 | 253 | consensus Predicted dehydrogenase [Secondary metab | 99.12 | |
| KOG1478 | 341 | consensus 3-keto sterol reductase [Lipid transport | 99.0 | |
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 98.9 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 98.87 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 98.81 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 98.77 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 98.76 | |
| PLN00106 | 323 | malate dehydrogenase | 98.71 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 98.65 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 98.64 | |
| PRK06732 | 229 | phosphopantothenate--cysteine ligase; Validated | 98.52 | |
| PRK05086 | 312 | malate dehydrogenase; Provisional | 98.49 | |
| KOG2733 | 423 | consensus Uncharacterized membrane protein [Functi | 98.47 | |
| PRK09620 | 229 | hypothetical protein; Provisional | 98.37 | |
| PF00056 | 141 | Ldh_1_N: lactate/malate dehydrogenase, NAD binding | 98.34 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 98.3 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 98.3 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 98.28 | |
| cd00704 | 323 | MDH Malate dehydrogenase. Malate dehydrogenase (MD | 98.28 | |
| TIGR01758 | 324 | MDH_euk_cyt malate dehydrogenase, NAD-dependent. T | 98.23 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 98.21 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 98.1 | |
| TIGR00521 | 390 | coaBC_dfp phosphopantothenoylcysteine decarboxylas | 98.1 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 98.06 | |
| COG3268 | 382 | Uncharacterized conserved protein [Function unknow | 98.03 | |
| cd05291 | 306 | HicDH_like L-2-hydroxyisocapronate dehydrogenases | 97.96 | |
| COG0569 | 225 | TrkA K+ transport systems, NAD-binding component [ | 97.95 | |
| TIGR02114 | 227 | coaB_strep phosphopantothenate--cysteine ligase, s | 97.93 | |
| PRK00066 | 315 | ldh L-lactate dehydrogenase; Reviewed | 97.9 | |
| PLN02968 | 381 | Probable N-acetyl-gamma-glutamyl-phosphate reducta | 97.87 | |
| cd05294 | 309 | LDH-like_MDH_nadp A lactate dehydrogenases-like st | 97.84 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 97.84 | |
| PRK14106 | 450 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.8 | |
| PRK12475 | 338 | thiamine/molybdopterin biosynthesis MoeB-like prot | 97.78 | |
| PLN02819 | 1042 | lysine-ketoglutarate reductase/saccharopine dehydr | 97.76 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 97.76 | |
| PRK05442 | 326 | malate dehydrogenase; Provisional | 97.74 | |
| PRK07688 | 339 | thiamine/molybdopterin biosynthesis ThiF/MoeB-like | 97.71 | |
| PF02254 | 116 | TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg | 97.69 | |
| PTZ00117 | 319 | malate dehydrogenase; Provisional | 97.69 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.67 | |
| TIGR01759 | 323 | MalateDH-SF1 malate dehydrogenase. This model repr | 97.67 | |
| cd00650 | 263 | LDH_MDH_like NAD-dependent, lactate dehydrogenase- | 97.66 | |
| PF00899 | 135 | ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a | 97.65 | |
| PRK14874 | 334 | aspartate-semialdehyde dehydrogenase; Provisional | 97.59 | |
| PRK06223 | 307 | malate dehydrogenase; Reviewed | 97.58 | |
| cd01337 | 310 | MDH_glyoxysomal_mitochondrial Glyoxysomal and mito | 97.54 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 97.52 | |
| PTZ00082 | 321 | L-lactate dehydrogenase; Provisional | 97.51 | |
| cd05290 | 307 | LDH_3 A subgroup of L-lactate dehydrogenases. L-la | 97.5 | |
| PF03446 | 163 | NAD_binding_2: NAD binding domain of 6-phosphogluc | 97.5 | |
| PRK06129 | 308 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 97.49 | |
| cd00757 | 228 | ThiF_MoeB_HesA_family ThiF_MoeB_HesA. Family of E1 | 97.47 | |
| PLN00112 | 444 | malate dehydrogenase (NADP); Provisional | 97.45 | |
| PRK00436 | 343 | argC N-acetyl-gamma-glutamyl-phosphate reductase; | 97.45 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 97.42 | |
| COG0039 | 313 | Mdh Malate/lactate dehydrogenases [Energy producti | 97.41 | |
| PF04127 | 185 | DFP: DNA / pantothenate metabolism flavoprotein; I | 97.41 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 97.41 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 97.4 | |
| cd05293 | 312 | LDH_1 A subgroup of L-lactate dehydrogenases. L-la | 97.39 | |
| PRK09496 | 453 | trkA potassium transporter peripheral membrane com | 97.36 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 97.36 | |
| TIGR01772 | 312 | MDH_euk_gproteo malate dehydrogenase, NAD-dependen | 97.35 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 97.35 | |
| cd05292 | 308 | LDH_2 A subgroup of L-lactate dehydrogenases. L-la | 97.34 | |
| PRK08644 | 212 | thiamine biosynthesis protein ThiF; Provisional | 97.33 | |
| PRK15116 | 268 | sulfur acceptor protein CsdL; Provisional | 97.33 | |
| cd01483 | 143 | E1_enzyme_family Superfamily of activating enzymes | 97.33 | |
| PRK05597 | 355 | molybdopterin biosynthesis protein MoeB; Validated | 97.31 | |
| TIGR01850 | 346 | argC N-acetyl-gamma-glutamyl-phosphate reductase, | 97.3 | |
| cd01485 | 198 | E1-1_like Ubiquitin activating enzyme (E1), repeat | 97.3 | |
| cd01487 | 174 | E1_ThiF_like E1_ThiF_like. Member of superfamily o | 97.28 | |
| PRK05690 | 245 | molybdopterin biosynthesis protein MoeB; Provision | 97.28 | |
| cd00755 | 231 | YgdL_like Family of activating enzymes (E1) of ubi | 97.26 | |
| PRK05671 | 336 | aspartate-semialdehyde dehydrogenase; Reviewed | 97.26 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 97.26 | |
| PLN02602 | 350 | lactate dehydrogenase | 97.26 | |
| TIGR02355 | 240 | moeB molybdopterin synthase sulfurylase MoeB. This | 97.24 | |
| TIGR01757 | 387 | Malate-DH_plant malate dehydrogenase, NADP-depende | 97.19 | |
| PRK08328 | 231 | hypothetical protein; Provisional | 97.19 | |
| cd05295 | 452 | MDH_like Malate dehydrogenase-like. These MDH-like | 97.17 | |
| COG4982 | 866 | 3-oxoacyl-[acyl-carrier protein] | 97.17 | |
| PRK08223 | 287 | hypothetical protein; Validated | 97.16 | |
| cd00300 | 300 | LDH_like L-lactate dehydrogenase-like enzymes. Mem | 97.16 | |
| PRK05600 | 370 | thiamine biosynthesis protein ThiF; Validated | 97.15 | |
| TIGR01763 | 305 | MalateDH_bact malate dehydrogenase, NAD-dependent. | 97.12 | |
| cd01492 | 197 | Aos1_SUMO Ubiquitin activating enzyme (E1) subunit | 97.12 | |
| PRK02472 | 447 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 97.1 | |
| TIGR01915 | 219 | npdG NADPH-dependent F420 reductase. This model re | 97.08 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 97.07 | |
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 97.07 | |
| cd01339 | 300 | LDH-like_MDH L-lactate dehydrogenase-like malate d | 97.05 | |
| PF03721 | 185 | UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogen | 97.05 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 97.04 | |
| PRK00048 | 257 | dihydrodipicolinate reductase; Provisional | 97.01 | |
| TIGR01296 | 339 | asd_B aspartate-semialdehyde dehydrogenase (peptid | 97.01 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 97.0 | |
| PRK10669 | 558 | putative cation:proton antiport protein; Provision | 96.98 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 96.96 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 96.94 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 96.94 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 96.94 | |
| COG2085 | 211 | Predicted dinucleotide-binding enzymes [General fu | 96.93 | |
| PRK09260 | 288 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.93 | |
| PRK07819 | 286 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.93 | |
| TIGR02354 | 200 | thiF_fam2 thiamine biosynthesis protein ThiF, fami | 96.92 | |
| PRK11064 | 415 | wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Pro | 96.92 | |
| cd01489 | 312 | Uba2_SUMO Ubiquitin activating enzyme (E1) subunit | 96.91 | |
| cd01484 | 234 | E1-2_like Ubiquitin activating enzyme (E1), repeat | 96.9 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.9 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 96.9 | |
| PRK03659 | 601 | glutathione-regulated potassium-efflux system prot | 96.88 | |
| PRK08293 | 287 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.86 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 96.86 | |
| PRK07878 | 392 | molybdopterin biosynthesis-like protein MoeZ; Vali | 96.85 | |
| TIGR01771 | 299 | L-LDH-NAD L-lactate dehydrogenase. This model repr | 96.84 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.83 | |
| COG1004 | 414 | Ugd Predicted UDP-glucose 6-dehydrogenase [Cell en | 96.82 | |
| PLN02383 | 344 | aspartate semialdehyde dehydrogenase | 96.8 | |
| PRK08664 | 349 | aspartate-semialdehyde dehydrogenase; Reviewed | 96.76 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 96.75 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 96.73 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 96.72 | |
| PRK06130 | 311 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.71 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.7 | |
| PRK07877 | 722 | hypothetical protein; Provisional | 96.7 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 96.69 | |
| PF01113 | 124 | DapB_N: Dihydrodipicolinate reductase, N-terminus; | 96.68 | |
| PF10100 | 429 | DUF2338: Uncharacterized protein conserved in bact | 96.68 | |
| PRK08057 | 248 | cobalt-precorrin-6x reductase; Reviewed | 96.67 | |
| TIGR02717 | 447 | AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP | 96.66 | |
| cd01491 | 286 | Ube1_repeat1 Ubiquitin activating enzyme (E1), rep | 96.66 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 96.63 | |
| TIGR03026 | 411 | NDP-sugDHase nucleotide sugar dehydrogenase. All o | 96.63 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 96.62 | |
| PRK03562 | 621 | glutathione-regulated potassium-efflux system prot | 96.62 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 96.61 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.61 | |
| PLN02520 | 529 | bifunctional 3-dehydroquinate dehydratase/shikimat | 96.6 | |
| PRK14851 | 679 | hypothetical protein; Provisional | 96.6 | |
| PRK07411 | 390 | hypothetical protein; Validated | 96.59 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 96.59 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.59 | |
| PRK14852 | 989 | hypothetical protein; Provisional | 96.58 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 96.56 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.52 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 96.51 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 96.49 | |
| PLN02353 | 473 | probable UDP-glucose 6-dehydrogenase | 96.47 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 96.47 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.41 | |
| PRK07531 | 495 | bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioe | 96.41 | |
| PRK06153 | 393 | hypothetical protein; Provisional | 96.4 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.4 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 96.35 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 96.35 | |
| PRK08040 | 336 | putative semialdehyde dehydrogenase; Provisional | 96.32 | |
| PRK13302 | 271 | putative L-aspartate dehydrogenase; Provisional | 96.28 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.25 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 96.25 | |
| PRK09310 | 477 | aroDE bifunctional 3-dehydroquinate dehydratase/sh | 96.24 | |
| PRK07530 | 292 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.24 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.22 | |
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 96.22 | |
| PRK15469 | 312 | ghrA bifunctional glyoxylate/hydroxypyruvate reduc | 96.19 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 96.19 | |
| KOG1494 | 345 | consensus NAD-dependent malate dehydrogenase [Ener | 96.18 | |
| PRK06035 | 291 | 3-hydroxyacyl-CoA dehydrogenase; Validated | 96.11 | |
| PRK14618 | 328 | NAD(P)H-dependent glycerol-3-phosphate dehydrogena | 96.11 | |
| TIGR00978 | 341 | asd_EA aspartate-semialdehyde dehydrogenase (non-p | 96.1 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 96.1 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 96.09 | |
| PRK00094 | 325 | gpsA NAD(P)H-dependent glycerol-3-phosphate dehydr | 96.09 | |
| COG1023 | 300 | Gnd Predicted 6-phosphogluconate dehydrogenase [Ca | 96.06 | |
| TIGR01019 | 286 | sucCoAalpha succinyl-CoA synthetase, alpha subunit | 96.06 | |
| PF01210 | 157 | NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate | 96.02 | |
| PRK11559 | 296 | garR tartronate semialdehyde reductase; Provisiona | 96.01 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 96.01 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 95.98 | |
| COG2084 | 286 | MmsB 3-hydroxyisobutyrate dehydrogenase and relate | 95.97 | |
| TIGR01505 | 291 | tartro_sem_red 2-hydroxy-3-oxopropionate reductase | 95.96 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.91 | |
| PRK15461 | 296 | NADH-dependent gamma-hydroxybutyrate dehydrogenase | 95.91 | |
| PLN02545 | 295 | 3-hydroxybutyryl-CoA dehydrogenase | 95.91 | |
| PRK06728 | 347 | aspartate-semialdehyde dehydrogenase; Provisional | 95.89 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 95.86 | |
| PRK09599 | 301 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.85 | |
| PRK11863 | 313 | N-acetyl-gamma-glutamyl-phosphate reductase; Provi | 95.85 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.84 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 95.83 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 95.82 | |
| PRK11199 | 374 | tyrA bifunctional chorismate mutase/prephenate deh | 95.79 | |
| PRK12490 | 299 | 6-phosphogluconate dehydrogenase-like protein; Rev | 95.79 | |
| PRK15057 | 388 | UDP-glucose 6-dehydrogenase; Provisional | 95.79 | |
| PTZ00142 | 470 | 6-phosphogluconate dehydrogenase; Provisional | 95.78 | |
| PF02571 | 249 | CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: | 95.78 | |
| PRK06522 | 304 | 2-dehydropantoate 2-reductase; Reviewed | 95.78 | |
| COG0002 | 349 | ArgC Acetylglutamate semialdehyde dehydrogenase [A | 95.78 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 95.77 | |
| PRK12480 | 330 | D-lactate dehydrogenase; Provisional | 95.77 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 95.77 | |
| TIGR02992 | 326 | ectoine_eutC ectoine utilization protein EutC. Mem | 95.75 |
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-67 Score=546.14 Aligned_cols=441 Identities=71% Similarity=1.050 Sum_probs=382.9
Q ss_pred CCcccccccccccccCCCCcCcceeeccccceeeecCCCCCCCCCCcCccccccccccCCccccccCCCCCCCCCCCCCC
Q 013273 1 MEICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDD 80 (446)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 80 (446)
||+|+||++.+++||++++||||+.++|.+.+++||++|+++++.++++.++++.++++..++........+....++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 80 (576)
T PLN03209 1 MEGTSLQSSAITTIPTSLTKCGFIEKPFLHGQLLRFPGFSKHPHSRKLRSLDIKAQASGATKFSSAAIEAIPKELDTKDE 80 (576)
T ss_pred CCcccccccccccccccccccccccCcccccceeeccccccCcccccccccchhhccccchhhhhhhhhccccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999988888888877778889
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++||||||+||||++++++|+++|++|++++|+.++...+.+.+..++++.. |.....+++++.+|+.|.+++.++
T Consensus 81 KvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~----Ga~~~~~v~iV~gDLtD~esI~~a 156 (576)
T PLN03209 81 DLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVE----GTQPVEKLEIVECDLEKPDQIGPA 156 (576)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccc----cccccCceEEEEecCCCHHHHHHH
Confidence 9999999999999999999999999999999999888777666554433211 211225689999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
++++|+||||+|.......++...+++|+.|+.+++++|++.+++|||++||.++...+......+..++|..+|..+|+
T Consensus 157 LggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga~~~g~p~~~~~sk~~~~~~KraaE~ 236 (576)
T PLN03209 157 LGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGTNKVGFPAAILNLFWGVLCWKRKAEE 236 (576)
T ss_pred hcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchhcccCccccchhhHHHHHHHHHHHHH
Confidence 99999999999975443345566788999999999999999999999999998874333222224456789999999999
Q ss_pred HHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhH
Q 013273 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM 320 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i 320 (446)
+|+++|++|++||||+++++.+.+..+..+.....+...++.++++|||+++++++.++....+++|+++++......++
T Consensus 237 ~L~~sGIrvTIVRPG~L~tp~d~~~~t~~v~~~~~d~~~gr~isreDVA~vVvfLasd~~as~~kvvevi~~~~~p~~~~ 316 (576)
T PLN03209 237 ALIASGLPYTIVRPGGMERPTDAYKETHNLTLSEEDTLFGGQVSNLQVAELMACMAKNRRLSYCKVVEVIAETTAPLTPM 316 (576)
T ss_pred HHHHcCCCEEEEECCeecCCccccccccceeeccccccCCCccCHHHHHHHHHHHHcCchhccceEEEEEeCCCCCCCCH
Confidence 99999999999999999988654433333333333445677899999999999999987657899999999988888999
Q ss_pred HHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCC
Q 013273 321 EELLAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPST-TPG 399 (446)
Q Consensus 321 ~e~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Plspy~~~~~lkp~~~p~~~~~~-~~~ 399 (446)
.+++..+..++..+++.+..+.+++.|+..|..+++.....++..|.+.+..||||||+.||||||||||+|++++ +++
T Consensus 317 ~~~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 396 (576)
T PLN03209 317 EELLAKIPSQRVPPKESDAADGPKPVPTKPVTPEAPSPPIEEEPPQPKAVVPRPLSPYTAYEDLKPPTSPIPTPPSSSPA 396 (576)
T ss_pred HHHHHhcccccCCCCcccccccCCCCCCcccCCCCCCCcccccCCCCcCCCCCCCCCccccccCCCCCCCCCCCCCCCCC
Confidence 9999999999998999999999999999999999888888889999999999999999999999999999999999 777
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CCCCcccCCCCCCCCCCCCCCCCCCC
Q 013273 400 ASKTSDIDAKPVASKSTPLSE-PSSTTTKKEAPKSEMKKTEPLSPYIA 446 (446)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~sp~~~ 446 (446)
+.+.+|++++++++++++++- ++++++.++ .+.++++.||||||++
T Consensus 397 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 443 (576)
T PLN03209 397 SSKSVDAVAKPAEPDVVPSPGSASNVPEVEP-AQVEAKKTRPLSPYAR 443 (576)
T ss_pred CCCcccccccCccCCCCCCCCccccCccccc-cccccCCCCCCCcccc
Confidence 789999999999999988873 477888765 9999999999999984
|
|
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.98 E-value=3.7e-31 Score=266.90 Aligned_cols=245 Identities=15% Similarity=0.035 Sum_probs=183.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+|+|||||||||||++|+++|+++|++|++++|...........+... .+.....++.++.+|+.|.+.+
T Consensus 13 ~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~Di~d~~~l 84 (348)
T PRK15181 13 LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTS--------VSEEQWSRFIFIQGDIRKFTDC 84 (348)
T ss_pred ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhc--------cccccCCceEEEEccCCCHHHH
Confidence 45679999999999999999999999999999998654322211111000 0011124689999999999999
Q ss_pred HHHhcCCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 158 EPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
.++++++|+|||+|+... ....++...+++|+.|+.+|+++|++.++++|||+||..++... .++....|.+.
T Consensus 85 ~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~v~~SS~~vyg~~~~~~~~e~~~~~p~~~ 164 (348)
T PRK15181 85 QKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDAHVSSFTYAASSSTYGDHPDLPKIEERIGRPLSP 164 (348)
T ss_pred HHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeechHhhCCCCCCCCCCCCCCCCCCh
Confidence 999999999999998643 22344556688999999999999999999999999998774321 12233456778
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|..+|.+++ ++|++++++||+++|||++.... ...+.+...+....+++|++|+|++
T Consensus 165 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a 244 (348)
T PRK15181 165 YAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQNPNGAYSAVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQA 244 (348)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCCCCCCccccCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 9999999998875 36999999999999999753210 1111222223334478999999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
++.++.... ...+++|||+++...++.++++.+.++.+.
T Consensus 245 ~~~~~~~~~~~~~~~~yni~~g~~~s~~e~~~~i~~~~~~ 284 (348)
T PRK15181 245 NLLSATTNDLASKNKVYNVAVGDRTSLNELYYLIRDGLNL 284 (348)
T ss_pred HHHHHhcccccCCCCEEEecCCCcEeHHHHHHHHHHHhCc
Confidence 998776432 135789999999999999999999998874
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.2e-30 Score=256.84 Aligned_cols=221 Identities=24% Similarity=0.339 Sum_probs=177.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|||||||||++|+++|+++||+|++++|+.++...+. ..+++++.+|+.|++++.++
T Consensus 1 MkIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-------------------~~~v~~v~~Dl~d~~~l~~a 61 (317)
T CHL00194 1 MSLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-------------------EWGAELVYGDLSLPETLPPS 61 (317)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-------------------hcCCEEEECCCCCHHHHHHH
Confidence 58999999999999999999999999999999876543221 14689999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
+.++|+|||+++... .+....+++|+.++.+++++|+++|++|||++||.+...++ ...|..+|..+|+
T Consensus 62 l~g~d~Vi~~~~~~~---~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~~~~~~~--------~~~~~~~K~~~e~ 130 (317)
T CHL00194 62 FKGVTAIIDASTSRP---SDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSILNAEQYP--------YIPLMKLKSDIEQ 130 (317)
T ss_pred HCCCCEEEECCCCCC---CCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccccccccC--------CChHHHHHHHHHH
Confidence 999999999976432 23345678899999999999999999999999997653322 2358899999999
Q ss_pred HHHhCCCCEEEEecCCccCCCcc-cc----cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 241 ALIASGLPYTIVRPGGMERPTDA-YK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~gp~~~-~~----~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+++++|++++++||+++|+.... +. ......+. .+.....+||++|+|++++.++.++. ..+++||++++...
T Consensus 131 ~l~~~~l~~tilRp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~-~~~~~~ni~g~~~~ 208 (317)
T CHL00194 131 KLKKSGIPYTIFRLAGFFQGLISQYAIPILEKQPIWIT-NESTPISYIDTQDAAKFCLKSLSLPE-TKNKTFPLVGPKSW 208 (317)
T ss_pred HHHHcCCCeEEEeecHHhhhhhhhhhhhhccCCceEec-CCCCccCccCHHHHHHHHHHHhcCcc-ccCcEEEecCCCcc
Confidence 99999999999999998864211 10 01111121 12233478999999999999998765 56899999999999
Q ss_pred ChhhHHHHHHhccCCCCC
Q 013273 316 PLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 316 t~~~i~e~l~~i~~~~~~ 333 (446)
++.++.+++.++.|+...
T Consensus 209 s~~el~~~~~~~~g~~~~ 226 (317)
T CHL00194 209 NSSEIISLCEQLSGQKAK 226 (317)
T ss_pred CHHHHHHHHHHHhCCCCe
Confidence 999999999999988643
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-30 Score=255.34 Aligned_cols=234 Identities=21% Similarity=0.187 Sum_probs=177.0
Q ss_pred EEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 84 FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 84 lVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
|||||+||||++|+++|+++| ++|++++|....... ..+ ...+..+++.+|++|.+++.+++
T Consensus 1 LVTGgsGflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~~--~~~--------------~~~~~~~~~~~Di~d~~~l~~a~ 64 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLLERGYIYEVRVLDRSPPPKFL--KDL--------------QKSGVKEYIQGDITDPESLEEAL 64 (280)
T ss_pred CEEcCCcHHHHHHHHHHHHCCCceEEEEcccccccccc--hhh--------------hcccceeEEEeccccHHHHHHHh
Confidence 699999999999999999999 899999987754221 001 11134459999999999999999
Q ss_pred cCCCEEEEcccCCCCcc-CCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC---C------Cchhh--hchhh
Q 013273 162 GNASVVICCIGASEKEV-FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---G------FPAAI--LNLFW 229 (446)
Q Consensus 162 ~~~D~VI~~Ag~~~~~~-~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~---~------~~~~~--~~~~~ 229 (446)
+++|+|||+|+...... ...+..+++|+.|++|++++|++++++||||+||.++... + .+..+ .....
T Consensus 65 ~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~~VkrlVytSS~~vv~~~~~~~~~~~~dE~~~~~~~~~~ 144 (280)
T PF01073_consen 65 EGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKAGVKRLVYTSSISVVFDNYKGDPIINGDEDTPYPSSPLD 144 (280)
T ss_pred cCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcCcceeEeccCCCCcccCCcCCcccccccC
Confidence 99999999998755433 3456678999999999999999999999999999877433 1 11111 22455
Q ss_pred HHHHHHHHHHHHHHh-C------C--CCEEEEecCCccCCCccccccc---------ceeecccCcccCCccCHHHHHHH
Q 013273 230 GVLLWKRKAEEALIA-S------G--LPYTIVRPGGMERPTDAYKETH---------NITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~~-~------g--l~~tivRPg~v~gp~~~~~~~~---------~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.|+.+|..+|+++.+ . | +..++|||..||||++...... .......+....+++|++|||++
T Consensus 145 ~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~a 224 (280)
T PF01073_consen 145 PYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHA 224 (280)
T ss_pred chHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccchhhHHHHhcccceeecCCCceECcEeHHHHHHH
Confidence 799999999999874 2 2 8899999999999987542111 11111222334468999999999
Q ss_pred HHHHHhC---C---CCCCCcEEEEecCCCCC-hhhHHHHHHhccCCCCC
Q 013273 292 LACMAKN---R---SLSYCKVVEVIAETTAP-LTPMEELLAKIPSQRAE 333 (446)
Q Consensus 292 i~~ll~~---~---~~~~~~v~ni~~~~~~t-~~~i~e~l~~i~~~~~~ 333 (446)
++.+++. + ....|+.|+|.++.... ..+|...+.+.+|....
T Consensus 225 hvlA~~~L~~~~~~~~~~G~~y~itd~~p~~~~~~f~~~~~~~~G~~~~ 273 (280)
T PF01073_consen 225 HVLAAQALLEPGKPERVAGQAYFITDGEPVPSFWDFMRPLWEALGYPPP 273 (280)
T ss_pred HHHHHHHhccccccccCCCcEEEEECCCccCcHHHHHHHHHHHCCCCCC
Confidence 9887652 2 33689999999999887 77888777777777654
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.8e-30 Score=246.41 Aligned_cols=236 Identities=18% Similarity=0.120 Sum_probs=186.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+|+||+|.+.+|++.|++|++++.-.....+.... ..+.|+++|+.|.+.+.++
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~------------------~~~~f~~gDi~D~~~L~~v 62 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLK------------------LQFKFYEGDLLDRALLTAV 62 (329)
T ss_pred CeEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhh------------------ccCceEEeccccHHHHHHH
Confidence 5799999999999999999999999999999855433332110 1168999999999999999
Q ss_pred hc--CCCEEEEcccC--CCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 161 LG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~--~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
|+ .+|+|||+||. +..+..++..+++.|+.||.+|+++|+++++++|||-||..++... .++.+..|.++|
T Consensus 63 f~~~~idaViHFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~~~vFSStAavYG~p~~~PI~E~~~~~p~NPY 142 (329)
T COG1087 63 FEENKIDAVVHFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVKKFIFSSTAAVYGEPTTSPISETSPLAPINPY 142 (329)
T ss_pred HHhcCCCEEEECccccccchhhhCHHHHHhhchHhHHHHHHHHHHhCCCEEEEecchhhcCCCCCcccCCCCCCCCCCcc
Confidence 94 68999999994 5667888999999999999999999999999999999998873321 334567788899
Q ss_pred HHHHHHHHHHHHh----CCCCEEEEecCCccCCCcc--c-----ccccceee------cc--------------cCcccC
Q 013273 232 LLWKRKAEEALIA----SGLPYTIVRPGGMERPTDA--Y-----KETHNITL------SQ--------------EDTLFG 280 (446)
Q Consensus 232 ~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~--~-----~~~~~~~~------~~--------------~~~~~~ 280 (446)
|++|++.|++|++ ++++++++|..++-|.... . ..++.+.+ +. .++...
T Consensus 143 G~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~~l~ifG~DY~T~DGT~iR 222 (329)
T COG1087 143 GRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRDKLFIFGDDYDTKDGTCIR 222 (329)
T ss_pred hhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCceeEEeCCCCCCCCCCeee
Confidence 9999999999984 7899999999999886422 1 11211111 11 122234
Q ss_pred CccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
.+||+.|+|++.+.+++.-.. ....+||++.+...+..|+.+.++++.|+....
T Consensus 223 DYIHV~DLA~aH~~Al~~L~~~g~~~~~NLG~G~G~SV~evi~a~~~vtg~~ip~ 277 (329)
T COG1087 223 DYIHVDDLADAHVLALKYLKEGGSNNIFNLGSGNGFSVLEVIEAAKKVTGRDIPV 277 (329)
T ss_pred eeeehhHHHHHHHHHHHHHHhCCceeEEEccCCCceeHHHHHHHHHHHhCCcCce
Confidence 689999999999998864221 123699999999999999999999999966543
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.97 E-value=6.2e-30 Score=261.50 Aligned_cols=240 Identities=15% Similarity=0.125 Sum_probs=177.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.|+|||||||||||++|++.|+++ |++|++++|+..+...+... + .....++++++.+|+.|.+.
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~~~-------~-----~~~~~~~~~~~~~Dl~d~~~ 79 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLLEP-------D-----TVPWSGRIQFHRINIKHDSR 79 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhhcc-------c-----cccCCCCeEEEEcCCCChHH
Confidence 45578999999999999999999998 59999999987654432210 0 00112479999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh-----
Q 013273 157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI----- 224 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~----- 224 (446)
+.+++.++|+|||+|+..... ..++...+..|+.++.+++++|++.+ +||||+||..++... .++.+
T Consensus 80 l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~~-~r~v~~SS~~vYg~~~~~~~~e~~p~~~~~ 158 (386)
T PLN02427 80 LEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSENN-KRLIHFSTCEVYGKTIGSFLPKDHPLRQDP 158 (386)
T ss_pred HHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhcC-CEEEEEeeeeeeCCCcCCCCCccccccccc
Confidence 999999999999999864321 12233445689999999999998887 799999998764321 11111
Q ss_pred -----------------hchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-----------------
Q 013273 225 -----------------LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------------- 266 (446)
Q Consensus 225 -----------------~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~----------------- 266 (446)
..+.+.|+.+|..+|++++. +|++++++||+++|||++.+..
T Consensus 159 ~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~ 238 (386)
T PLN02427 159 AFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRMDFIPGIDGPSEGVPRVLACFS 238 (386)
T ss_pred ccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCCCccccccccccccchHHHHHH
Confidence 02335799999999999864 6999999999999999743110
Q ss_pred -----ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecC-CCCChhhHHHHHHhccCC
Q 013273 267 -----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE-TTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 267 -----~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~-~~~t~~~i~e~l~~i~~~ 330 (446)
...+.+.........+||++|+|++++.+++++....+++||++++ ...++.++.+++.++++.
T Consensus 239 ~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~~~g~~yni~~~~~~~s~~el~~~i~~~~g~ 308 (386)
T PLN02427 239 NNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPARANGHIFNVGNPNNEVTVRQLAEMMTEVYAK 308 (386)
T ss_pred HHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCcccccCceEEeCCCCCCccHHHHHHHHHHHhcc
Confidence 0011111112223468999999999999998763235789999987 588999999999999885
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.7e-29 Score=252.02 Aligned_cols=235 Identities=16% Similarity=0.193 Sum_probs=178.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC-ChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~~~ 157 (446)
||+|||||||||||++|++.|+++ |++|++++|+..+...+. ...+++++.+|+. +.+.+
T Consensus 1 m~~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~Dl~~~~~~~ 62 (347)
T PRK11908 1 MKKVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLV------------------NHPRMHFFEGDITINKEWI 62 (347)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhc------------------cCCCeEEEeCCCCCCHHHH
Confidence 368999999999999999999987 699999998764433211 1156999999998 67778
Q ss_pred HHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh------
Q 013273 158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI------ 224 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~------ 224 (446)
.++++++|+|||+|+.... ...++...+++|+.++.+++++|++.+ ++|||+||..++... .++..
T Consensus 63 ~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~~-~~~v~~SS~~vyg~~~~~~~~ee~~~~~~~~ 141 (347)
T PRK11908 63 EYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCPDEEFDPEASPLVYGP 141 (347)
T ss_pred HHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhcC-CeEEEEecceeeccCCCcCcCccccccccCc
Confidence 8889999999999985432 234566678999999999999999988 699999998764321 11111
Q ss_pred -hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-------------------cccceeecccCcccC
Q 013273 225 -LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFG 280 (446)
Q Consensus 225 -~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-------------------~~~~~~~~~~~~~~~ 280 (446)
.++.+.|+.+|..+|++++ +.|++++++||+.+|||+.... ....+.+...+....
T Consensus 142 ~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r 221 (347)
T PRK11908 142 INKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKR 221 (347)
T ss_pred CCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceee
Confidence 1355689999999999886 3799999999999999974210 011111222223344
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC-CCCChhhHHHHHHhccCCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+||++|+|++++.+++++. ...+++|||+++ ...++.++.+++.+..+..+.
T Consensus 222 ~~i~v~D~a~a~~~~~~~~~~~~~g~~yni~~~~~~~s~~e~~~~i~~~~~~~~~ 276 (347)
T PRK11908 222 AFTDIDDGIDALMKIIENKDGVASGKIYNIGNPKNNHSVRELANKMLELAAEYPE 276 (347)
T ss_pred ccccHHHHHHHHHHHHhCccccCCCCeEEeCCCCCCcCHHHHHHHHHHHhcCccc
Confidence 78999999999999998753 135789999987 468999999999999886543
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=7.7e-29 Score=246.54 Aligned_cols=237 Identities=18% Similarity=0.161 Sum_probs=174.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|||||||||||++|+++|+++|++|++++|+......... +.. +++ ..++++++.+|+.|.+.+.+
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~--~~~--------~~~~~~~~~~Dl~~~~~~~~ 72 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPNDPKKTEH-LLA--LDG--------AKERLHLFKANLLEEGSFDS 72 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCchhhHHH-HHh--ccC--------CCCceEEEeccccCcchHHH
Confidence 5789999999999999999999999999999998754332211 110 010 12578999999999999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCC-CcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC----------Cchhhhch
Q 013273 160 ALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAILNL 227 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~-~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~----------~~~~~~~~ 227 (446)
+++++|+|||+|+.......++. ..+++|+.++.+++++|++. +++|||++||.++..++ .++.+..+
T Consensus 73 ~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~~~~~y~~~~~~~~~~~~E~~~~~p 152 (322)
T PLN02662 73 VVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSMAAVAYNGKPLTPDVVVDETWFSDP 152 (322)
T ss_pred HHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCHHHhcCCCcCCCCCCcCCcccCCCh
Confidence 99999999999986543333333 56789999999999999987 89999999997642121 11111122
Q ss_pred ------hhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc--cc----eeecc--cCcccCCccCHHHHH
Q 013273 228 ------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--HN----ITLSQ--EDTLFGGQVSNLQVA 289 (446)
Q Consensus 228 ------~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~--~~----~~~~~--~~~~~~~~v~~~DvA 289 (446)
...|+.+|..+|++++ ++|++++++||+++|||....... .. +..+. .......+||++|+|
T Consensus 153 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 232 (322)
T PLN02662 153 AFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLLQPTLNTSAEAILNLINGAQTFPNASYRWVDVRDVA 232 (322)
T ss_pred hHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCCCCCCCchHHHHHHHhcCCccCCCCCcCeEEHHHHH
Confidence 2479999999998875 479999999999999996432100 00 00000 112234789999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
++++.+++++. . ++.||+++ ...++.++.+++.++++.
T Consensus 233 ~a~~~~~~~~~-~-~~~~~~~g-~~~s~~e~~~~i~~~~~~ 270 (322)
T PLN02662 233 NAHIQAFEIPS-A-SGRYCLVE-RVVHYSEVVKILHELYPT 270 (322)
T ss_pred HHHHHHhcCcC-c-CCcEEEeC-CCCCHHHHHHHHHHHCCC
Confidence 99999998764 2 45788874 678999999999998764
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.97 E-value=5.7e-29 Score=253.01 Aligned_cols=233 Identities=15% Similarity=0.038 Sum_probs=178.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+|+|||||||||||++|++.|+++|++|++++|....... . ....++++.+|++|.+.
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~-----------------~--~~~~~~~~~~Dl~d~~~ 78 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMS-----------------E--DMFCHEFHLVDLRVMEN 78 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccc-----------------c--ccccceEEECCCCCHHH
Confidence 3467899999999999999999999999999999986532110 0 00235788999999999
Q ss_pred HHHHhcCCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC---------chh-
Q 013273 157 IEPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF---------PAA- 223 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~---------~~~- 223 (446)
+.+++.++|+|||+|+.... ...++...+..|+.++.+|+++|++.++++|||+||..++.... ++.
T Consensus 79 ~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~~vk~~V~~SS~~vYg~~~~~~~~~~~~E~~~ 158 (370)
T PLN02695 79 CLKVTKGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARINGVKRFFYASSACIYPEFKQLETNVSLKESDA 158 (370)
T ss_pred HHHHHhCCCEEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHhCCCEEEEeCchhhcCCccccCcCCCcCcccC
Confidence 99999999999999985421 12233445678999999999999999999999999987643211 111
Q ss_pred -hhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc----------------ccceeecccCcccCCc
Q 013273 224 -ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE----------------THNITLSQEDTLFGGQ 282 (446)
Q Consensus 224 -~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~----------------~~~~~~~~~~~~~~~~ 282 (446)
+..+.+.|+.+|..+|++++ +.|++++++||+++|||++.+.. ...+.+...+....++
T Consensus 159 ~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~r~~ 238 (370)
T PLN02695 159 WPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKALTSTDEFEMWGDGKQTRSF 238 (370)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCCccccccccHHHHHHHHHcCCCCeEEeCCCCeEEeE
Confidence 35677889999999999875 37999999999999999653211 0111111222334468
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+|++|++++++.++++.. +++|||+++..+++.++.+++.+.+|..
T Consensus 239 i~v~D~a~ai~~~~~~~~---~~~~nv~~~~~~s~~el~~~i~~~~g~~ 284 (370)
T PLN02695 239 TFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEIALSFENKK 284 (370)
T ss_pred EeHHHHHHHHHHHHhccC---CCceEecCCCceeHHHHHHHHHHHhCCC
Confidence 999999999999887653 6899999999999999999999988764
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=239.87 Aligned_cols=243 Identities=21% Similarity=0.230 Sum_probs=184.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+||||+||||++|++.|+++||.|++.+|+++.... .+.+. +|+++ .+++..+.+||.|.+++.
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~-~~~L~--~l~~a--------~~~l~l~~aDL~d~~sf~ 73 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKK-TEHLR--KLEGA--------KERLKLFKADLLDEGSFD 73 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhh-HHHHH--hcccC--------cccceEEeccccccchHH
Confidence 56899999999999999999999999999999999876332 11122 23332 267999999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCC-CcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC----------Cchhh--
Q 013273 159 PALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG----------FPAAI-- 224 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~-~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~----------~~~~~-- 224 (446)
+++.+||+|||.|........+++ ...+.++.|+.|++++|++.. ++|||++||.++..+. ++..+
T Consensus 74 ~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~aAv~~~~~~~~~~~vvdE~~wsd 153 (327)
T KOG1502|consen 74 KAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSSTAAVRYNGPNIGENSVVDEESWSD 153 (327)
T ss_pred HHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccHHHhccCCcCCCCCcccccccCCc
Confidence 999999999999997766555544 578889999999999999987 9999999997653321 11111
Q ss_pred ----hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccc------eeec---ccCcccCCccCHHH
Q 013273 225 ----LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHN------ITLS---QEDTLFGGQVSNLQ 287 (446)
Q Consensus 225 ----~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~------~~~~---~~~~~~~~~v~~~D 287 (446)
..-.+.|..+|..+|+... +.|++.+.|.|+.|+||......... +.-+ .....+..+||++|
T Consensus 154 ~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~~l~~s~~~~l~~i~G~~~~~~n~~~~~VdVrD 233 (327)
T KOG1502|consen 154 LDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQPSLNSSLNALLKLIKGLAETYPNFWLAFVDVRD 233 (327)
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCcccccchhHHHHHHHHhcccccCCCCceeeEeHHH
Confidence 1112469999999998865 47899999999999999654311110 0001 11222334799999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCCCC
Q 013273 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 335 (446)
Q Consensus 288 vA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~~ 335 (446)
||++.+.+++++. .++.|.+.++.. ...++.+++.+.+.....+.
T Consensus 234 VA~AHv~a~E~~~--a~GRyic~~~~~-~~~ei~~~l~~~~P~~~ip~ 278 (327)
T KOG1502|consen 234 VALAHVLALEKPS--AKGRYICVGEVV-SIKEIADILRELFPDYPIPK 278 (327)
T ss_pred HHHHHHHHHcCcc--cCceEEEecCcc-cHHHHHHHHHHhCCCCCCCC
Confidence 9999999999987 356787777665 48999999999988777443
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.97 E-value=1e-28 Score=246.20 Aligned_cols=238 Identities=21% Similarity=0.181 Sum_probs=176.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++||||||+||||++++++|+++|++|++++|+..+...+...... . + ...+++++.+|++|.+.+.
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~---~------~--~~~~~~~~~~Dl~~~~~~~ 72 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLAL---D------G--AKERLKLFKADLLEESSFE 72 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhc---c------C--CCCceEEEecCCCCcchHH
Confidence 357999999999999999999999999999999987654433221110 0 0 1257899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCC-CCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCC----------chhhh-
Q 013273 159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF----------PAAIL- 225 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~-~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~----------~~~~~- 225 (446)
++++++|+|||+|+.......++ ...+++|+.|+.+++++|++. +++|||++||.++..++. ++...
T Consensus 73 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~~~~~~~~~~~~~~~~~~E~~~~~ 152 (322)
T PLN02986 73 QAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSSTAAVLFRQPPIEANDVVDETFFSD 152 (322)
T ss_pred HHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecchhheecCCccCCCCCCcCcccCCC
Confidence 99999999999998654332333 345788999999999999986 789999999986532221 11111
Q ss_pred -----chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc--c----ceeeccc--CcccCCccCHHHH
Q 013273 226 -----NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--H----NITLSQE--DTLFGGQVSNLQV 288 (446)
Q Consensus 226 -----~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~--~----~~~~~~~--~~~~~~~v~~~Dv 288 (446)
.+.+.|+.+|..+|.+++ ++|++++++||+.+|||....... . .+..+.. ......+||++|+
T Consensus 153 p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~Dv 232 (322)
T PLN02986 153 PSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLLQPTLNFSVELIVDFINGKNLFNNRFYRFVDVRDV 232 (322)
T ss_pred hHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCCCCCCCccHHHHHHHHcCCCCCCCcCcceeEHHHH
Confidence 134679999999998775 379999999999999996432100 0 0000110 1123468999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
|++++.+++++. . +++||+.+ ...++.++.+++.++++.
T Consensus 233 a~a~~~al~~~~-~-~~~yni~~-~~~s~~e~~~~i~~~~~~ 271 (322)
T PLN02986 233 ALAHIKALETPS-A-NGRYIIDG-PIMSVNDIIDILRELFPD 271 (322)
T ss_pred HHHHHHHhcCcc-c-CCcEEEec-CCCCHHHHHHHHHHHCCC
Confidence 999999999875 2 45899954 578999999999999874
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.2e-28 Score=247.99 Aligned_cols=236 Identities=20% Similarity=0.160 Sum_probs=177.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++||||||+||||++|+++|+++|++|++++|+.+..... .+..+ . + ...+++++.+|++|.+++
T Consensus 8 ~~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~--~~~~~--~------~--~~~~~~~~~~Dl~d~~~~ 75 (342)
T PLN02214 8 PAGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDDPKNT--HLREL--E------G--GKERLILCKADLQDYEAL 75 (342)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchhhhHH--HHHHh--h------C--CCCcEEEEecCcCChHHH
Confidence 3467899999999999999999999999999999987543211 01111 0 0 014688999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc-ccCCC--------Cchh-----
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG-TNKFG--------FPAA----- 223 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~-~~~~~--------~~~~----- 223 (446)
.+++.++|+|||+|+... .++...+++|+.++.+++++|++++++||||+||.+ ++... .++.
T Consensus 76 ~~~~~~~d~Vih~A~~~~---~~~~~~~~~nv~gt~~ll~aa~~~~v~r~V~~SS~~avyg~~~~~~~~~~~E~~~~~~~ 152 (342)
T PLN02214 76 KAAIDGCDGVFHTASPVT---DDPEQMVEPAVNGAKFVINAAAEAKVKRVVITSSIGAVYMDPNRDPEAVVDESCWSDLD 152 (342)
T ss_pred HHHHhcCCEEEEecCCCC---CCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeccceeeeccCCCCCCcccCcccCCChh
Confidence 999999999999998642 344566889999999999999999999999999964 43211 1111
Q ss_pred -hhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc--c----ceeecc---cCcccCCccCHHHHH
Q 013273 224 -ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--H----NITLSQ---EDTLFGGQVSNLQVA 289 (446)
Q Consensus 224 -~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~--~----~~~~~~---~~~~~~~~v~~~DvA 289 (446)
..++.+.|+.+|..+|++++ +.|++++++||+++|||++..... . ....+. .......+||++|+|
T Consensus 153 ~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~V~Dva 232 (342)
T PLN02214 153 FCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQPTINASLYHVLKYLTGSAKTYANLTQAYVDVRDVA 232 (342)
T ss_pred hccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCcccCCCCCcCeeEHHHHH
Confidence 22355689999999999886 369999999999999997532100 0 000111 011234789999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++++.+++++. .++.||+++ ...++.++.+++.++++..
T Consensus 233 ~a~~~al~~~~--~~g~yn~~~-~~~~~~el~~~i~~~~~~~ 271 (342)
T PLN02214 233 LAHVLVYEAPS--ASGRYLLAE-SARHRGEVVEILAKLFPEY 271 (342)
T ss_pred HHHHHHHhCcc--cCCcEEEec-CCCCHHHHHHHHHHHCCCC
Confidence 99999998764 356899987 4679999999999998643
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.5e-28 Score=247.93 Aligned_cols=238 Identities=19% Similarity=0.198 Sum_probs=174.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+.++||||||+||||++|+++|+++|++|++++|+.+....+...+.. . + ...+++++.+|++|.+.+.
T Consensus 4 ~~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~---~------~--~~~~~~~v~~Dl~d~~~~~ 72 (351)
T PLN02650 4 QKETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKKVKHLLDL---P------G--ATTRLTLWKADLAVEGSFD 72 (351)
T ss_pred CCCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHHHHHHHhc---c------C--CCCceEEEEecCCChhhHH
Confidence 457899999999999999999999999999999987655443221110 0 0 1136899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCC-CCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC-------Cchh------
Q 013273 159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-------FPAA------ 223 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~-~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~-------~~~~------ 223 (446)
+++.++|+|||+|+.......++ ...+++|+.++.+++++|++++ ++||||+||.++.... .++.
T Consensus 73 ~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~~~~~~~~~~~~~~~E~~~~~~~~ 152 (351)
T PLN02650 73 DAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSAGTVNVEEHQKPVYDEDCWSDLDF 152 (351)
T ss_pred HHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecchhhcccCCCCCCccCcccCCchhh
Confidence 99999999999998643322233 3568899999999999999876 7899999997543211 1111
Q ss_pred ---hhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccccee-----e-ccc----CcccCCccCHH
Q 013273 224 ---ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNIT-----L-SQE----DTLFGGQVSNL 286 (446)
Q Consensus 224 ---~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~-----~-~~~----~~~~~~~v~~~ 286 (446)
...+.+.|+.+|..+|.+++ ++|++++++||+++|||+........+. . ... ......++|++
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~v~V~ 232 (351)
T PLN02650 153 CRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFISTSMPPSLITALSLITGNEAHYSIIKQGQFVHLD 232 (351)
T ss_pred hhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCCCCCCccHHHHHHHhcCCccccCcCCCcceeeHH
Confidence 01233579999999998875 4699999999999999964321000000 0 000 01124789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
|+|++++.+++++. .+++| ++++...++.++++++.++++.
T Consensus 233 Dva~a~~~~l~~~~--~~~~~-i~~~~~~s~~el~~~i~~~~~~ 273 (351)
T PLN02650 233 DLCNAHIFLFEHPA--AEGRY-ICSSHDATIHDLAKMLREKYPE 273 (351)
T ss_pred HHHHHHHHHhcCcC--cCceE-EecCCCcCHHHHHHHHHHhCcc
Confidence 99999999998764 24578 5666778999999999998764
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.4e-28 Score=232.39 Aligned_cols=236 Identities=14% Similarity=0.062 Sum_probs=189.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|++|||||.||||++++++++++. ++|+++++-. ...+.+. . ....+++.|+++|+.|.+.
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~~~d~~v~~~DkLTYAgn~~~l~----~-----------~~~~~~~~fv~~DI~D~~~ 65 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNKHPDDHVVNLDKLTYAGNLENLA----D-----------VEDSPRYRFVQGDICDREL 65 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhcCCCceEEEEecccccCCHHHHH----h-----------hhcCCCceEEeccccCHHH
Confidence 579999999999999999999986 4567776521 1122221 1 1223799999999999999
Q ss_pred HHHHhc--CCCEEEEcccC--CCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccccCC-------CCchhh
Q 013273 157 IEPALG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKF-------GFPAAI 224 (446)
Q Consensus 157 ~~~a~~--~~D~VI~~Ag~--~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~~~~-------~~~~~~ 224 (446)
+.++|. ..|+|+|.|+. ++.+..++....++|+.||.+|++++++...+ ||+||||.-|++. -.+..+
T Consensus 66 v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HISTDEVYG~l~~~~~~FtE~tp 145 (340)
T COG1088 66 VDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHISTDEVYGDLGLDDDAFTETTP 145 (340)
T ss_pred HHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEeccccccccccCCCCCcccCCC
Confidence 999997 58999999985 45677788888999999999999999998754 9999999766332 124567
Q ss_pred hchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
.+|.++|.+||+.++.++++ +|++++|.|+.+-|||..... ....+.+-+.+.....|+|++|-|
T Consensus 146 ~~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPyqfpEKlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~ 225 (340)
T COG1088 146 YNPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPYQFPEKLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHC 225 (340)
T ss_pred CCCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCCcCchhhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHH
Confidence 88999999999999998874 899999999999999975321 122223333344455799999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++|..++.... .|++|||+++...+..++.+++++++++...
T Consensus 226 ~ai~~Vl~kg~--~GE~YNIgg~~E~~Nlevv~~i~~~l~~~~~ 267 (340)
T COG1088 226 RAIDLVLTKGK--IGETYNIGGGNERTNLEVVKTICELLGKDKP 267 (340)
T ss_pred HHHHHHHhcCc--CCceEEeCCCccchHHHHHHHHHHHhCcccc
Confidence 99999999876 4999999999999999999999999998665
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=253.28 Aligned_cols=245 Identities=16% Similarity=0.093 Sum_probs=175.3
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH-------HHH------HHHHHHhhhcccccccCCCCCC
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENL------VQSVKQMKLDGELANKGIQPVE 142 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~-------~~l------~~~~~~~~l~~~~~~~g~~~~~ 142 (446)
...++|+||||||+||||++|+++|+++|++|++++|..... ..+ .+.++.... ....
T Consensus 43 ~~~~~k~VLVTGatGfIGs~Lv~~L~~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---------~~~~ 113 (442)
T PLN02572 43 SSSKKKKVMVIGGDGYCGWATALHLSKRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKE---------VSGK 113 (442)
T ss_pred ccccCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeccccccccccccccccccccchHHHHHHHHH---------hhCC
Confidence 346778999999999999999999999999999987532110 000 011110000 0014
Q ss_pred ceEEEEcCCCChhcHHHHhc--CCCEEEEcccCCCCc--cCC---CCCcccchHHHHHHHHHHHHhCCCC-EEEEEcccc
Q 013273 143 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKE--VFD---ITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLG 214 (446)
Q Consensus 143 ~v~~v~~Dl~d~~~~~~a~~--~~D~VI~~Ag~~~~~--~~~---~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~ 214 (446)
+++++.+|++|.+.+.++++ ++|+|||+|+..... ..+ +...+++|+.|+.+++++|++.+++ +||++||..
T Consensus 114 ~v~~v~~Dl~d~~~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~gv~~~~V~~SS~~ 193 (442)
T PLN02572 114 EIELYVGDICDFEFLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEFAPDCHLVKLGTMG 193 (442)
T ss_pred cceEEECCCCCHHHHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHhCCCccEEEEecce
Confidence 68999999999999999997 589999999753221 111 2334678999999999999999885 999999987
Q ss_pred ccCCCC----c-----------h---hhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc------
Q 013273 215 TNKFGF----P-----------A---AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE------ 266 (446)
Q Consensus 215 ~~~~~~----~-----------~---~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~------ 266 (446)
++.... + + .+..|.+.|+.+|.++|.+++ .+|++++++||+++|||++....
T Consensus 194 vYG~~~~~~~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~~~~~~~~~li 273 (442)
T PLN02572 194 EYGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRTDETMMDEELI 273 (442)
T ss_pred ecCCCCCCCcccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCCcccccccccc
Confidence 743210 0 1 134566789999999998875 36999999999999999753210
Q ss_pred ----------------------ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCC--cEEEEecCCCCChhhHHH
Q 013273 267 ----------------------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC--KVVEVIAETTAPLTPMEE 322 (446)
Q Consensus 267 ----------------------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~--~v~ni~~~~~~t~~~i~e 322 (446)
...+.+...+....+++|++|+|++++.++++.. ..+ ++||+++ ...++.++.+
T Consensus 274 ~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~-~~g~~~i~Nigs-~~~si~el~~ 351 (442)
T PLN02572 274 NRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA-KPGEFRVFNQFT-EQFSVNELAK 351 (442)
T ss_pred cccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh-hcCceeEEEeCC-CceeHHHHHH
Confidence 0111121222334479999999999999998653 123 5899976 5689999999
Q ss_pred HHHhc---cCCC
Q 013273 323 LLAKI---PSQR 331 (446)
Q Consensus 323 ~l~~i---~~~~ 331 (446)
++.++ +|..
T Consensus 352 ~i~~~~~~~g~~ 363 (442)
T PLN02572 352 LVTKAGEKLGLD 363 (442)
T ss_pred HHHHHHHhhCCC
Confidence 99998 7654
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=246.26 Aligned_cols=238 Identities=13% Similarity=0.091 Sum_probs=176.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++|||||||||||++|++.|+++|++|+++.++......+.. +... ....+++++.+|++|.+++++
T Consensus 1 ~~~vlVtGatGfIG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~-~~~~-----------~~~~~~~~~~~Dl~d~~~~~~ 68 (355)
T PRK10217 1 MRKILITGGAGFIGSALVRYIINETSDAVVVVDKLTYAGNLMS-LAPV-----------AQSERFAFEKVDICDRAELAR 68 (355)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHHcCCCEEEEEecCccccchhh-hhhc-----------ccCCceEEEECCCcChHHHHH
Confidence 3689999999999999999999999886654443221111110 0000 011468899999999999999
Q ss_pred Hhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHh---------CCCCEEEEEccccccCCC-------
Q 013273 160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATI---------AKVNHFIMVSSLGTNKFG------- 219 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~---------~~v~r~V~vSS~~~~~~~------- 219 (446)
+++ ++|+||||||.... ...++...+++|+.++.+++++|.+ .++++||++||.+++...
T Consensus 69 ~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~ 148 (355)
T PRK10217 69 VFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLHSTDDFF 148 (355)
T ss_pred HHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCCCCCCCc
Confidence 997 48999999986532 2234566788999999999999976 356799999997764311
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~ 284 (446)
.++.+..+.+.|+.+|..+|.+++ +.|++++++||+++|||++... ....+.+...+....+++|
T Consensus 149 ~E~~~~~p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~ 228 (355)
T PRK10217 149 TETTPYAPSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYHFPEKLIPLMILNALAGKPLPVYGNGQQIRDWLY 228 (355)
T ss_pred CCCCCCCCCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCcccHHHHHHHHHhcCCCceEeCCCCeeeCcCc
Confidence 122344567889999999998875 4799999999999999985311 0111222222333457999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++|+|++++.+++... .+++|||+++...++.++.+.+.+..+..
T Consensus 229 v~D~a~a~~~~~~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~~ 273 (355)
T PRK10217 229 VEDHARALYCVATTGK--VGETYNIGGHNERKNLDVVETICELLEEL 273 (355)
T ss_pred HHHHHHHHHHHHhcCC--CCCeEEeCCCCcccHHHHHHHHHHHhccc
Confidence 9999999999998753 47899999999999999999999988753
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.96 E-value=4.4e-28 Score=241.80 Aligned_cols=237 Identities=20% Similarity=0.165 Sum_probs=174.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+||||++|++.|+++|++|++++|+............ ..+ ...+++++.+|++|.+.+++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~---~~~--------~~~~~~~~~~D~~d~~~~~~ 73 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLA---LDG--------AKERLKLFKADLLDEGSFEL 73 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHh---ccC--------CCCceEEEeCCCCCchHHHH
Confidence 5799999999999999999999999999999998765433211111 000 11478999999999999999
Q ss_pred HhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC----------Cchhhhc
Q 013273 160 ALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAILN 226 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~----------~~~~~~~ 226 (446)
+++++|+||||||.... ...++...+++|+.++.+++++|.+. ++++||++||.++.... .++.+.+
T Consensus 74 ~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~~E~~~~~ 153 (325)
T PLN02989 74 AIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSSMAAVLAPETKLGPNDVVDETFFTN 153 (325)
T ss_pred HHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecchhheecCCccCCCCCccCcCCCCc
Confidence 99999999999985422 12233456789999999999999885 57899999997552210 1222222
Q ss_pred h------hhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccc--cee--ecccC----cccCCccCHHHH
Q 013273 227 L------FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH--NIT--LSQED----TLFGGQVSNLQV 288 (446)
Q Consensus 227 ~------~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~--~~~--~~~~~----~~~~~~v~~~Dv 288 (446)
+ ...|+.+|+.+|.+++ ++|++++++||+.+|||+....... ... +..+. .....++|++|+
T Consensus 154 p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~i~~~~~~~~~~~~~~r~~i~v~Dv 233 (325)
T PLN02989 154 PSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQPTLNFSVAVIVELMKGKNPFNTTHHRFVDVRDV 233 (325)
T ss_pred hhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCCCCCCchHHHHHHHHcCCCCCCCcCcCeeEHHHH
Confidence 2 2569999999998876 3699999999999999975321100 000 00111 112468999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
|++++.+++++. . +++||+. +...++.++.+++.++++.
T Consensus 234 a~a~~~~l~~~~-~-~~~~ni~-~~~~s~~ei~~~i~~~~~~ 272 (325)
T PLN02989 234 ALAHVKALETPS-A-NGRYIID-GPVVTIKDIENVLREFFPD 272 (325)
T ss_pred HHHHHHHhcCcc-c-CceEEEe-cCCCCHHHHHHHHHHHCCC
Confidence 999999998765 2 5689995 4578999999999999864
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.3e-27 Score=235.84 Aligned_cols=242 Identities=16% Similarity=0.139 Sum_probs=175.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|||||||||||++|+++|+++|++|++++|+.+... ..+.+..+ . + ...+++++.+|++|.+++.
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll~~G~~V~~~~R~~~~~~-~~~~~~~l--~------~--~~~~~~~~~~Dl~d~~~~~ 73 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLLSRGYTVHAAVQKNGETE-IEKEIRGL--S------C--EEERLKVFDVDPLDYHSIL 73 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEEcCchhhh-HHHHHHhc--c------c--CCCceEEEEecCCCHHHHH
Confidence 4578999999999999999999999999999999643221 11111111 0 0 1146899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC----------Cchhhhch
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG----------FPAAILNL 227 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~----------~~~~~~~~ 227 (446)
+++.++|+|+|+++.......++...+++|+.|+.+++++|.+. +++|||++||.++..++ .++.+..+
T Consensus 74 ~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~a~~~~~~~~~~~~~~~E~~~~~~ 153 (297)
T PLN02583 74 DALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLTAVIWRDDNISTQKDVDERSWSDQ 153 (297)
T ss_pred HHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchHheecccccCCCCCCCCcccCCCH
Confidence 99999999999876543222234567899999999999999886 68999999997553221 11111111
Q ss_pred h------hHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccceeecc---cCcccCCccCHHHHHHHHHH
Q 013273 228 F------WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQ---EDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 228 ~------~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~---~~~~~~~~v~~~DvA~ai~~ 294 (446)
. ..|+.+|..+|++++ ..|+++++|||+++|||+..... .+.... ......++||++|+|++++.
T Consensus 154 ~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~~~~--~~~~~~~~~~~~~~~~~v~V~Dva~a~~~ 231 (297)
T PLN02583 154 NFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLTQHN--PYLKGAAQMYENGVLVTVDVNFLVDAHIR 231 (297)
T ss_pred HHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCCCch--hhhcCCcccCcccCcceEEHHHHHHHHHH
Confidence 1 159999999999885 46999999999999999753211 111110 01112358999999999999
Q ss_pred HHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCCCC
Q 013273 295 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPK 335 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~~ 335 (446)
+++++. . ++.|.+.++......++.+++.+.+.....+.
T Consensus 232 al~~~~-~-~~r~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 270 (297)
T PLN02583 232 AFEDVS-S-YGRYLCFNHIVNTEEDAVKLAQMLSPLIPSPP 270 (297)
T ss_pred HhcCcc-c-CCcEEEecCCCccHHHHHHHHHHhCCCCCCCC
Confidence 999765 3 44788888776566789999999988765543
|
|
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1e-27 Score=245.37 Aligned_cols=232 Identities=25% Similarity=0.324 Sum_probs=179.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH--HHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL--VQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l--~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+..+++|||||||||||++++++|+++|++|++++|+.++.... ...+.. ..++++++.+|++|.
T Consensus 57 ~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~-------------~~~~v~~v~~Dl~d~ 123 (390)
T PLN02657 57 EPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKK-------------ELPGAEVVFGDVTDA 123 (390)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhh-------------hcCCceEEEeeCCCH
Confidence 45678999999999999999999999999999999987643210 000000 115789999999999
Q ss_pred hcHHHHhc----CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhH
Q 013273 155 VQIEPALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWG 230 (446)
Q Consensus 155 ~~~~~a~~----~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~ 230 (446)
+++.+++. ++|+||||+|.... .....+++|+.++.+++++|++.+++|||++||.++. .+...
T Consensus 124 ~~l~~~~~~~~~~~D~Vi~~aa~~~~---~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~v~---------~p~~~ 191 (390)
T PLN02657 124 DSLRKVLFSEGDPVDVVVSCLASRTG---GVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAICVQ---------KPLLE 191 (390)
T ss_pred HHHHHHHHHhCCCCcEEEECCccCCC---CCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecccc---------CcchH
Confidence 99999986 69999999885321 1234468899999999999999999999999998763 23446
Q ss_pred HHHHHHHHHHHHHh--CCCCEEEEecCCccCCCccc----ccccceeecccCcc-cCCccCHHHHHHHHHHHHhCCCCCC
Q 013273 231 VLLWKRKAEEALIA--SGLPYTIVRPGGMERPTDAY----KETHNITLSQEDTL-FGGQVSNLQVAELLACMAKNRSLSY 303 (446)
Q Consensus 231 Y~~sK~~~E~~l~~--~gl~~tivRPg~v~gp~~~~----~~~~~~~~~~~~~~-~~~~v~~~DvA~ai~~ll~~~~~~~ 303 (446)
|..+|...|+.++. .|++++||||+++|+..... .....+.+...+.. ...+||++|+|++++.++.++. ..
T Consensus 192 ~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~~~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~-~~ 270 (390)
T PLN02657 192 FQRAKLKFEAELQALDSDFTYSIVRPTAFFKSLGGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES-KI 270 (390)
T ss_pred HHHHHHHHHHHHHhccCCCCEEEEccHHHhcccHHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-cc
Confidence 88999999999986 89999999999999863221 11122222222222 3357999999999999998765 46
Q ss_pred CcEEEEecC-CCCChhhHHHHHHhccCCCCCC
Q 013273 304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 304 ~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
+++|||+++ ...++.++.+++.+++|+....
T Consensus 271 ~~~~~Iggp~~~~S~~Eia~~l~~~lG~~~~~ 302 (390)
T PLN02657 271 NKVLPIGGPGKALTPLEQGEMLFRILGKEPKF 302 (390)
T ss_pred CCEEEcCCCCcccCHHHHHHHHHHHhCCCCce
Confidence 799999986 5789999999999999976543
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.6e-28 Score=240.85 Aligned_cols=238 Identities=18% Similarity=0.190 Sum_probs=172.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++||||||+||||++|+++|+++|++|++++|+.+....... +..+ . ..++++++.+|++|.+++
T Consensus 7 ~~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~~~~--~---------~~~~~~~~~~Dl~d~~~~ 74 (338)
T PLN00198 7 TGKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPENQKKIAH-LRAL--Q---------ELGDLKIFGADLTDEESF 74 (338)
T ss_pred CCCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHH-HHhc--C---------CCCceEEEEcCCCChHHH
Confidence 346789999999999999999999999999999998754332211 1110 0 113689999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCC-CcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC---------Cch----
Q 013273 158 EPALGNASVVICCIGASEKEVFDIT-GPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG---------FPA---- 222 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~-~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~---------~~~---- 222 (446)
.++++++|+|||+|+.......++. ..+++|+.++.++++++.+. +++|||++||..++... .+.
T Consensus 75 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~~~g~~~~~~~~~~~~E~~~~~ 154 (338)
T PLN00198 75 EAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAAAVSINKLSGTGLVMNEKNWTD 154 (338)
T ss_pred HHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecceeeeccCCCCCCceeccccCCc
Confidence 9999999999999985432222222 34688999999999999886 58899999998664311 000
Q ss_pred -----hhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccc------------ceeecc-cCcc--
Q 013273 223 -----AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH------------NITLSQ-EDTL-- 278 (446)
Q Consensus 223 -----~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~------------~~~~~~-~~~~-- 278 (446)
....+.+.|+.+|..+|.+++ +.|++++++||+++|||+....... .+.+.. .+..
T Consensus 155 ~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 234 (338)
T PLN00198 155 VEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLTSDIPSSLSLAMSLITGNEFLINGLKGMQML 234 (338)
T ss_pred hhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCccCCCCCcHHHHHHHHcCCccccccccccccc
Confidence 112356779999999998876 3699999999999999974211000 011100 0111
Q ss_pred --cCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 279 --FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 279 --~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
..+++|++|+|++++.+++... .++.|+ +++...++.++++++.+.++.
T Consensus 235 ~~~~~~i~V~D~a~a~~~~~~~~~--~~~~~~-~~~~~~s~~el~~~i~~~~~~ 285 (338)
T PLN00198 235 SGSISITHVEDVCRAHIFLAEKES--ASGRYI-CCAANTSVPELAKFLIKRYPQ 285 (338)
T ss_pred cCCcceeEHHHHHHHHHHHhhCcC--cCCcEE-EecCCCCHHHHHHHHHHHCCC
Confidence 1378999999999999998754 235674 445667899999999988754
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=9.1e-28 Score=242.20 Aligned_cols=237 Identities=16% Similarity=0.073 Sum_probs=176.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+||||||+||||+++++.|+++|++|++++|+..........+.. ..++.++.+|++|.+++.
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~ 68 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNL--------------AKKIEDHFGDIRDAAKLR 68 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhh--------------cCCceEEEccCCCHHHHH
Confidence 357899999999999999999999999999999987654333221110 146788999999999999
Q ss_pred HHhcC--CCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC------Cchhhhch
Q 013273 159 PALGN--ASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG------FPAAILNL 227 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~------~~~~~~~~ 227 (446)
++++. +|+|||+||... ....++...+++|+.++.+++++|++.+ +++||++||..++... .+.....+
T Consensus 69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~~e~~~~~p 148 (349)
T TIGR02622 69 KAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNVTSDKCYRNDEWVWGYRETDPLGG 148 (349)
T ss_pred HHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEEechhhhCCCCCCCCCccCCCCCC
Confidence 99875 699999998532 2233455678899999999999998876 7899999997664311 12234466
Q ss_pred hhHHHHHHHHHHHHHHh-----------CCCCEEEEecCCccCCCcccc------------cccceeecccCcccCCccC
Q 013273 228 FWGVLLWKRKAEEALIA-----------SGLPYTIVRPGGMERPTDAYK------------ETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~-----------~gl~~tivRPg~v~gp~~~~~------------~~~~~~~~~~~~~~~~~v~ 284 (446)
.+.|+.+|..+|.+++. .|++++++||+++|||++... ....+.+. .+.....++|
T Consensus 149 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~~-~g~~~rd~i~ 227 (349)
T TIGR02622 149 HDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGDWAEDRLIPDVIRAFSSNKIVIIR-NPDATRPWQH 227 (349)
T ss_pred CCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCcchhhhhhHHHHHHHhcCCCeEEC-CCCcccceee
Confidence 78899999999988863 289999999999999964211 11122222 2344557899
Q ss_pred HHHHHHHHHHHHhCC---CCCCCcEEEEecC--CCCChhhHHHHHHhccCC
Q 013273 285 NLQVAELLACMAKNR---SLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~---~~~~~~v~ni~~~--~~~t~~~i~e~l~~i~~~ 330 (446)
++|+|++++.+++.. ....+++|||+++ ...++.++.+.+.+..+.
T Consensus 228 v~D~a~a~~~~~~~~~~~~~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~~ 278 (349)
T TIGR02622 228 VLEPLSGYLLLAEKLFTGQAEFAGAWNFGPRASDNARVVELVVDALEFWWG 278 (349)
T ss_pred HHHHHHHHHHHHHHHhhcCccccceeeeCCCcccCcCHHHHHHHHHHHhcC
Confidence 999999999887642 1123579999974 577889998888776553
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.1e-27 Score=241.05 Aligned_cols=239 Identities=13% Similarity=-0.008 Sum_probs=177.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH--HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++||||||+||||++|+++|+++|++|++++|+.+.. ..+....... ......+++++.+|++|.+.+.
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~~~l~ 71 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSSSFNTQRIEHIYEDP---------HNVNKARMKLHYGDLTDSSNLR 71 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCcccchhhhhhhhhcc---------ccccccceeEEEeccCCHHHHH
Confidence 5899999999999999999999999999999986421 1111100000 0000146899999999999999
Q ss_pred HHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCC---EEEEEccccccCCC-----Cchhhhc
Q 013273 159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKFG-----FPAAILN 226 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~---r~V~vSS~~~~~~~-----~~~~~~~ 226 (446)
+++.+ +|+|||+|+.... ...+....+++|+.|+.+++++|++++++ +|||+||..++... .++.+..
T Consensus 72 ~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~ 151 (343)
T TIGR01472 72 RIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTLGLIKSVKFYQASTSELYGKVQEIPQNETTPFY 151 (343)
T ss_pred HHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHhCCCcCeeEEEeccHHhhCCCCCCCCCCCCCCC
Confidence 99975 6999999996432 12233445678999999999999988764 89999998764321 2334456
Q ss_pred hhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc--c------------cc-ceeecccCcccCCccCHHH
Q 013273 227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--E------------TH-NITLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~--~------------~~-~~~~~~~~~~~~~~v~~~D 287 (446)
+.+.|+.+|..+|.+++. .|+++++.|+.++|||+.... . .. ...+...+.....++|++|
T Consensus 152 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D 231 (343)
T TIGR01472 152 PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRGENFVTRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKD 231 (343)
T ss_pred CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCCccccchHHHHHHHHHHcCCCCceeeCCCccccCceeHHH
Confidence 778999999999998863 689999999999999853210 0 00 0111122233457899999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 288 VAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 288 vA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+|++++.+++++. +++|||+++...++.++.+.+.++.|..
T Consensus 232 ~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~ 272 (343)
T TIGR01472 232 YVEAMWLMLQQDK---PDDYVIATGETHSVREFVEVSFEYIGKT 272 (343)
T ss_pred HHHHHHHHHhcCC---CccEEecCCCceeHHHHHHHHHHHcCCC
Confidence 9999999998753 4689999999999999999999998854
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=8e-28 Score=248.98 Aligned_cols=232 Identities=13% Similarity=0.073 Sum_probs=172.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
...|+|||||||||||++|+++|+++|++|++++|.......-...+ ....+++++.+|+.+.
T Consensus 118 ~~~mkILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~--------------~~~~~~~~~~~Di~~~--- 180 (436)
T PLN02166 118 RKRLRIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHL--------------FGNPRFELIRHDVVEP--- 180 (436)
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhh--------------ccCCceEEEECccccc---
Confidence 45579999999999999999999999999999998643211100000 0124688999999764
Q ss_pred HHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cch-----hhh
Q 013273 158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AIL 225 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~-----~~~ 225 (446)
.+.++|+|||+|+.... ...++...+++|+.|+.+|+++|+++++ +||++||..++... .++ .+.
T Consensus 181 --~~~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~p~ 257 (436)
T PLN02166 181 --ILLEVDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLEHPQKETYWGNVNPI 257 (436)
T ss_pred --cccCCCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECcHHHhCCCCCCCCCccccccCCCC
Confidence 34679999999985432 2234556688999999999999999886 99999998774321 111 133
Q ss_pred chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-------------ccceeecccCcccCCccCHHHH
Q 013273 226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.+.+.|+.+|..+|++++. .+++++++||+++|||++.... ...+.+.........++|++|+
T Consensus 258 ~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~~~~~i~~~i~~~l~~~~i~v~g~g~~~rdfi~V~Dv 337 (436)
T PLN02166 258 GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLDDGRVVSNFVAQTIRKQPMTVYGDGKQTRSFQYVSDL 337 (436)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCCccchHHHHHHHHhcCCCcEEeCCCCeEEeeEEHHHH
Confidence 4566799999999998863 6899999999999999742110 1111122222334578999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
|++++.++++.. +++|||+++..+++.++++.+.++.+...
T Consensus 338 a~ai~~~~~~~~---~giyNIgs~~~~Si~ela~~I~~~~g~~~ 378 (436)
T PLN02166 338 VDGLVALMEGEH---VGPFNLGNPGEFTMLELAEVVKETIDSSA 378 (436)
T ss_pred HHHHHHHHhcCC---CceEEeCCCCcEeHHHHHHHHHHHhCCCC
Confidence 999999997653 56999999999999999999999998643
|
|
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.2e-27 Score=237.24 Aligned_cols=223 Identities=14% Similarity=0.152 Sum_probs=170.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++|+||||||+||||++|++.|+++| ++|++++|+..+...+.+.+ ...++.++.+|++|.+
T Consensus 2 ~~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~---------------~~~~~~~v~~Dl~d~~ 66 (324)
T TIGR03589 2 FNNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKF---------------PAPCLRFFIGDVRDKE 66 (324)
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHh---------------CCCcEEEEEccCCCHH
Confidence 356899999999999999999999986 79999999866543332211 0146899999999999
Q ss_pred cHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHH
Q 013273 156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL 233 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~ 233 (446)
.+.++++++|+||||||.... ...++...+++|+.|+.+++++|++.++++||++||... ..|.+.|+.
T Consensus 67 ~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~~~~~iV~~SS~~~---------~~p~~~Y~~ 137 (324)
T TIGR03589 67 RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDNGVKRVVALSTDKA---------ANPINLYGA 137 (324)
T ss_pred HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeCCCC---------CCCCCHHHH
Confidence 999999999999999986432 223344578899999999999999999999999999643 134467999
Q ss_pred HHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--------cc-ceeecccCcccCCccCHHHHHHHHHHHHh
Q 013273 234 WKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--------TH-NITLSQEDTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 234 sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--------~~-~~~~~~~~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
+|..+|.+++ ..|++++++|||++|||+..... .. .+.+. .......|+|++|++++++.+++
T Consensus 138 sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~~~~i~~~~~~~~~~~~~~~i~-~~~~~r~~i~v~D~a~a~~~al~ 216 (324)
T TIGR03589 138 TKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSRGSVVPFFKSLKEEGVTELPIT-DPRMTRFWITLEQGVNFVLKSLE 216 (324)
T ss_pred HHHHHHHHHHHHHhhccccCcEEEEEeecceeCCCCCcHHHHHHHHHhCCCCeeeC-CCCceEeeEEHHHHHHHHHHHHh
Confidence 9999998874 36899999999999998643211 10 12222 12233468999999999999998
Q ss_pred CCCCCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 298 ~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
+.. .+++| +..+...++.++.+.+.+..
T Consensus 217 ~~~--~~~~~-~~~~~~~sv~el~~~i~~~~ 244 (324)
T TIGR03589 217 RML--GGEIF-VPKIPSMKITDLAEAMAPEC 244 (324)
T ss_pred hCC--CCCEE-ccCCCcEEHHHHHHHHHhhC
Confidence 642 36777 45555678888888888754
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5.4e-27 Score=238.30 Aligned_cols=247 Identities=19% Similarity=0.185 Sum_probs=176.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..++++||||||+||||++|++.|+++|++|++++|+.+....+. .+... +. .+ ....+++++.+|++|.++
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~-~l~~~---~~---~~-~~~~~~~~v~~Dl~d~~~ 121 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR-EMEMF---GE---MG-RSNDGIWTVMANLTEPES 121 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHhhh---cc---cc-ccCCceEEEEcCCCCHHH
Confidence 356789999999999999999999999999999999876544432 11110 00 00 001358899999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCcc-C-CCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCC-----------ch
Q 013273 157 IEPALGNASVVICCIGASEKEV-F-DITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-----------PA 222 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~-~-~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~-----------~~ 222 (446)
+.+++.++|+|||+|+...... . ......++|+.++.+++++|++. +++||||+||..+..++. ++
T Consensus 122 l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~~~~vyg~~~~~~~~~~i~E~ 201 (367)
T PLN02686 122 LHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSLLACVWRQNYPHDLPPVIDEE 201 (367)
T ss_pred HHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccHHHhcccccCCCCCCcccCCC
Confidence 9999999999999998643221 1 12345678999999999999986 799999999964211110 10
Q ss_pred ------hhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-cccee-ecccCcc----cCCccCHH
Q 013273 223 ------AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTL----FGGQVSNL 286 (446)
Q Consensus 223 ------~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-~~~~~-~~~~~~~----~~~~v~~~ 286 (446)
....+.+.|+.+|..+|++++ ..|+++++|||+++|||++.... ...+. +.....+ ...++|++
T Consensus 202 ~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~~~~~~~~~~~~~~g~~~~~g~g~~~~v~V~ 281 (367)
T PLN02686 202 SWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGFFRRNSTATIAYLKGAQEMLADGLLATADVE 281 (367)
T ss_pred CCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCCCCCCChhHHHHhcCCCccCCCCCcCeEEHH
Confidence 112345679999999999875 36999999999999999742110 00000 0000111 12489999
Q ss_pred HHHHHHHHHHhCC-CCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 287 QVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 287 DvA~ai~~ll~~~-~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
|+|++++.+++.. ....+++| |+++..+++.++.+.+.+++|...
T Consensus 282 Dva~A~~~al~~~~~~~~~~~y-i~~g~~~s~~e~~~~i~~~~g~~~ 327 (367)
T PLN02686 282 RLAEAHVCVYEAMGNKTAFGRY-ICFDHVVSREDEAEELARQIGLPI 327 (367)
T ss_pred HHHHHHHHHHhccCCCCCCCcE-EEeCCCccHHHHHHHHHHHcCCCC
Confidence 9999999999852 11346688 888888999999999999998643
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=4.1e-27 Score=237.39 Aligned_cols=233 Identities=12% Similarity=0.058 Sum_probs=174.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+|||||||||||++|++.|+++|++ |++++|... ....+. .+ ....+++++.+|++|.+++
T Consensus 1 mkilITGgtG~iG~~l~~~L~~~g~~~v~~~~~~~~~~~~~~~~----~~-----------~~~~~~~~~~~Dl~d~~~~ 65 (352)
T PRK10084 1 MKILVTGGAGFIGSAVVRHIINNTQDSVVNVDKLTYAGNLESLA----DV-----------SDSERYVFEHADICDRAEL 65 (352)
T ss_pred CeEEEECCCcHHhHHHHHHHHHhCCCeEEEecCCCccchHHHHH----hc-----------ccCCceEEEEecCCCHHHH
Confidence 47999999999999999999999976 554554321 111111 10 0114688899999999999
Q ss_pred HHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC---------CCCEEEEEccccccCCC-----
Q 013273 158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA---------KVNHFIMVSSLGTNKFG----- 219 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~---------~v~r~V~vSS~~~~~~~----- 219 (446)
.++++ ++|+||||||.... ...++...+++|+.|+.+++++|++. ++++||++||..++...
T Consensus 66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~ 145 (352)
T PRK10084 66 DRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDE 145 (352)
T ss_pred HHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCcccc
Confidence 99996 48999999986432 23445678999999999999999864 46799999997664321
Q ss_pred ----------CchhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-----------ccceeecc
Q 013273 220 ----------FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ 274 (446)
Q Consensus 220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~ 274 (446)
.++.+..+.+.|+.+|..+|.+++ ..|++++++|++.+|||++.... ...+.+..
T Consensus 146 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (352)
T PRK10084 146 VENSEELPLFTETTAYAPSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG 225 (352)
T ss_pred ccccccCCCccccCCCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCcCccchHHHHHHHHhcCCCeEEeC
Confidence 123345677889999999998876 36999999999999999752110 11112222
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
......+++|++|+|++++.++++.. .+++|||+++...++.++.+.+.+..+.
T Consensus 226 ~g~~~~~~v~v~D~a~a~~~~l~~~~--~~~~yni~~~~~~s~~~~~~~i~~~~~~ 279 (352)
T PRK10084 226 KGDQIRDWLYVEDHARALYKVVTEGK--AGETYNIGGHNEKKNLDVVLTICDLLDE 279 (352)
T ss_pred CCCeEEeeEEHHHHHHHHHHHHhcCC--CCceEEeCCCCcCcHHHHHHHHHHHhcc
Confidence 23334578999999999999998653 4789999999999999999999999875
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=226.69 Aligned_cols=215 Identities=16% Similarity=0.113 Sum_probs=179.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||++|++|..|++.|. .+++|+.++|.. .|++|++.+.++
T Consensus 1 M~iLi~G~~GqLG~~L~~~l~-~~~~v~a~~~~~----------------------------------~Ditd~~~v~~~ 45 (281)
T COG1091 1 MKILITGANGQLGTELRRALP-GEFEVIATDRAE----------------------------------LDITDPDAVLEV 45 (281)
T ss_pred CcEEEEcCCChHHHHHHHHhC-CCceEEeccCcc----------------------------------ccccChHHHHHH
Confidence 349999999999999999998 779999998853 899999999999
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc----c-CCCCchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT----N-KFGFPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~----~-~~~~~~~~~~~~~~Y 231 (446)
+. ..|+|||+|+.+.. ...+++..+.+|..|+.|++++|++.|. ++||+||..+ . .++.+++..+|.+.|
T Consensus 46 i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga-~lVhiSTDyVFDG~~~~~Y~E~D~~~P~nvY 124 (281)
T COG1091 46 IRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGA-RLVHISTDYVFDGEKGGPYKETDTPNPLNVY 124 (281)
T ss_pred HHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCC-eEEEeecceEecCCCCCCCCCCCCCCChhhh
Confidence 96 46999999996544 4445667799999999999999999998 9999999755 1 235677888999999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCc-cccccccee------ecccCcccCCccCHHHHHHHHHHHHhCCCCCCC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTD-AYKETHNIT------LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC 304 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~-~~~~~~~~~------~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~ 304 (446)
|++|+.+|..+++.+-+++|||.+|+||... +|..++... +......++.+++..|+|++|+.++.... .+
T Consensus 125 G~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~la~~~~~l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~--~~ 202 (281)
T COG1091 125 GRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRLAKEGKELKVVDDQYGSPTYTEDLADAILELLEKEK--EG 202 (281)
T ss_pred hHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHHhhcCCceEEECCeeeCCccHHHHHHHHHHHHhccc--cC
Confidence 9999999999999999999999999999854 443222222 22234567889999999999999998764 35
Q ss_pred cEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 305 KVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 305 ~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++||+++....++.+++..+.+.++..+.
T Consensus 203 ~~yH~~~~g~~Swydfa~~I~~~~~~~~~ 231 (281)
T COG1091 203 GVYHLVNSGECSWYEFAKAIFEEAGVDGE 231 (281)
T ss_pred cEEEEeCCCcccHHHHHHHHHHHhCCCcc
Confidence 59999999999999999999999887663
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.95 E-value=2e-27 Score=246.40 Aligned_cols=231 Identities=13% Similarity=0.069 Sum_probs=170.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.|+|||||||||||++|+++|+++|++|++++|.......- +.. .....+++++.+|+.+.
T Consensus 117 ~~~~kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~---~~~-----------~~~~~~~~~i~~D~~~~--- 179 (442)
T PLN02206 117 RKGLRVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKEN---VMH-----------HFSNPNFELIRHDVVEP--- 179 (442)
T ss_pred cCCCEEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhh---hhh-----------hccCCceEEEECCccCh---
Confidence 3568999999999999999999999999999998754321110 000 01125788999998764
Q ss_pred HHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cch-----hhh
Q 013273 158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----AIL 225 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~-----~~~ 225 (446)
++.++|+|||+|+.... ...++...+++|+.++.+|+++|++.++ +|||+||..++... .++ .+.
T Consensus 180 --~l~~~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~g~-r~V~~SS~~VYg~~~~~p~~E~~~~~~~P~ 256 (442)
T PLN02206 180 --ILLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGA-RFLLTSTSEVYGDPLQHPQVETYWGNVNPI 256 (442)
T ss_pred --hhcCCCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHhCC-EEEEECChHHhCCCCCCCCCccccccCCCC
Confidence 34679999999985432 2234556678999999999999999986 99999998774321 111 122
Q ss_pred chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-------------ccceeecccCcccCCccCHHHH
Q 013273 226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------THNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-------------~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.+.+.|+.+|..+|++++ .+|++++++||+++|||+..... ...+.+...+....+++|++|+
T Consensus 257 ~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~~~v~~~i~~~l~~~~i~i~g~G~~~rdfi~V~Dv 336 (442)
T PLN02206 257 GVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDGRVVSNFVAQALRKEPLTVYGDGKQTRSFQFVSDL 336 (442)
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCccccchHHHHHHHHHcCCCcEEeCCCCEEEeEEeHHHH
Confidence 335679999999999886 36899999999999999632110 1111122222334468999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
|++++.++++.. +++|||+++...++.++++.+.++++..
T Consensus 337 a~ai~~a~e~~~---~g~yNIgs~~~~sl~Elae~i~~~~g~~ 376 (442)
T PLN02206 337 VEGLMRLMEGEH---VGPFNLGNPGEFTMLELAKVVQETIDPN 376 (442)
T ss_pred HHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 999999997653 5699999999999999999999998754
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.4e-27 Score=257.94 Aligned_cols=235 Identities=14% Similarity=0.155 Sum_probs=177.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+|+|||||||||||++|+++|+++ |++|++++|.......+. ...+++++.+|++|...
T Consensus 313 ~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~------------------~~~~~~~~~gDl~d~~~ 374 (660)
T PRK08125 313 KRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFL------------------GHPRFHFVEGDISIHSE 374 (660)
T ss_pred hcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhc------------------CCCceEEEeccccCcHH
Confidence 45689999999999999999999986 799999999775432210 11478999999998655
Q ss_pred -HHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh----
Q 013273 157 -IEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI---- 224 (446)
Q Consensus 157 -~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~---- 224 (446)
+++++.++|+|||+|+.... ...++...+++|+.++.+++++|++++ ++|||+||..++... .++..
T Consensus 375 ~l~~~l~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~~ 453 (660)
T PRK08125 375 WIEYHIKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKYN-KRIIFPSTSEVYGMCTDKYFDEDTSNLIV 453 (660)
T ss_pred HHHHHhcCCCEEEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhcC-CeEEEEcchhhcCCCCCCCcCcccccccc
Confidence 57788999999999985432 223344567899999999999999998 799999997664321 11111
Q ss_pred ---hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-------------------ccceeecccCcc
Q 013273 225 ---LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTL 278 (446)
Q Consensus 225 ---~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-------------------~~~~~~~~~~~~ 278 (446)
..+.+.|+.+|..+|++++ .+|++++++||+++|||++.... ...+.+...+..
T Consensus 454 ~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i~~~g~g~~ 533 (660)
T PRK08125 454 GPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLVDGGKQ 533 (660)
T ss_pred CCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCeEEeCCCce
Confidence 1244679999999999986 36999999999999999742100 011112222333
Q ss_pred cCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC-CCChhhHHHHHHhccCCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~-~~t~~~i~e~l~~i~~~~ 331 (446)
..+++|++|+|++++.++++.. ...+++|||+++. ..++.++.+++.+.++..
T Consensus 534 ~rd~i~v~Dva~a~~~~l~~~~~~~~g~iyni~~~~~~~s~~el~~~i~~~~g~~ 588 (660)
T PRK08125 534 KRCFTDIRDGIEALFRIIENKDNRCDGQIINIGNPDNEASIRELAEMLLASFEKH 588 (660)
T ss_pred eeceeeHHHHHHHHHHHHhccccccCCeEEEcCCCCCceeHHHHHHHHHHHhccC
Confidence 4579999999999999998753 2347899999985 689999999999999854
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.95 E-value=9.2e-27 Score=235.25 Aligned_cols=236 Identities=19% Similarity=0.175 Sum_probs=171.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
...|+||||||+||||++++++|+++|++|++++|+..+...+...+. ...+++++.+|+.|.+.+
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~~~~~~ 73 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWK--------------EGDRLRLFRADLQEEGSF 73 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhc--------------cCCeEEEEECCCCCHHHH
Confidence 456799999999999999999999999999999998765554332211 115689999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCc----cCCCCCc-----ccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC--------
Q 013273 158 EPALGNASVVICCIGASEKE----VFDITGP-----YRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-------- 219 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~----~~~~~~~-----~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~-------- 219 (446)
.+++.++|+|||+|+..... ..++... ++.|+.++.+++++|++.+ +++||++||.+++...
T Consensus 74 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~~~ 153 (353)
T PLN02896 74 DEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVKRVVFTSSISTLTAKDSNGRWRA 153 (353)
T ss_pred HHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCccEEEEEechhhccccccCCCCCC
Confidence 99999999999999864322 1223322 3445699999999998874 7899999997664311
Q ss_pred --Cch--hhh-------chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc--cceee---cccCcc-
Q 013273 220 --FPA--AIL-------NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--HNITL---SQEDTL- 278 (446)
Q Consensus 220 --~~~--~~~-------~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~--~~~~~---~~~~~~- 278 (446)
.++ .+. .+.+.|+.+|..+|++++ ..|++++++||+++|||+...... ....+ ......
T Consensus 154 ~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~~~~~~~~~~g~~~~~ 233 (353)
T PLN02896 154 VVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFLTPSVPSSIQVLLSPITGDSKLF 233 (353)
T ss_pred ccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCcCCCCCchHHHHHHHhcCCcccc
Confidence 111 011 123479999999999875 379999999999999996431100 00000 000000
Q ss_pred -----------cCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 279 -----------FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 279 -----------~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
...+||++|+|++++.+++.+. .+++|++ ++...++.++.+++.++++.
T Consensus 234 ~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~~~--~~~~~~~-~~~~~s~~el~~~i~~~~~~ 293 (353)
T PLN02896 234 SILSAVNSRMGSIALVHIEDICDAHIFLMEQTK--AEGRYIC-CVDSYDMSELINHLSKEYPC 293 (353)
T ss_pred ccccccccccCceeEEeHHHHHHHHHHHHhCCC--cCccEEe-cCCCCCHHHHHHHHHHhCCC
Confidence 1268999999999999998654 2457854 56678999999999998864
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.9e-27 Score=235.08 Aligned_cols=247 Identities=17% Similarity=0.115 Sum_probs=180.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++++|||||||||||++|++.|+++|++|++++|...........+.... + ....++.++.+|+.|.+.
T Consensus 2 ~~~~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~~--------~-~~~~~~~~~~~D~~~~~~ 72 (352)
T PLN02240 2 SLMGRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNLDNSSEEALRRVKELA--------G-DLGDNLVFHKVDLRDKEA 72 (352)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCcchHHHHHHHHHhh--------c-ccCccceEEecCcCCHHH
Confidence 3556899999999999999999999999999999876432221111111110 0 011468899999999999
Q ss_pred HHHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhch
Q 013273 157 IEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 157 ~~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
+.++++ ++|+||||||.... ...++...+++|+.++.+++++|++.++++||++||.+++... .++.+.++
T Consensus 73 l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~~ 152 (352)
T PLN02240 73 LEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKHGCKKLVFSSSATVYGQPEEVPCTEEFPLSA 152 (352)
T ss_pred HHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCC
Confidence 999885 68999999986432 2234455688999999999999999999999999997664211 23345566
Q ss_pred hhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCccc--cc--------------------ccceeecc------
Q 013273 228 FWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAY--KE--------------------THNITLSQ------ 274 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~--~~--------------------~~~~~~~~------ 274 (446)
...|+.+|..+|++++. .+++++++|++.+||++... .. ...+.+..
T Consensus 153 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 232 (352)
T PLN02240 153 TNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTK 232 (352)
T ss_pred CCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCC
Confidence 78899999999998862 46889999999999864210 00 00010100
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCC---CCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNR---SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~---~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
.+.....+||++|+|++++.++.+. ....+++||++++..+++.++.+++.++++...
T Consensus 233 ~g~~~~~~i~v~D~a~a~~~a~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~ 293 (352)
T PLN02240 233 DGTGVRDYIHVMDLADGHIAALRKLFTDPDIGCEAYNLGTGKGTSVLEMVAAFEKASGKKI 293 (352)
T ss_pred CCCEEEeeEEHHHHHHHHHHHHhhhhhccCCCCceEEccCCCcEeHHHHHHHHHHHhCCCC
Confidence 1223346899999999999888642 113468999999999999999999999998643
|
|
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.8e-27 Score=235.18 Aligned_cols=214 Identities=13% Similarity=0.026 Sum_probs=160.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+||||++|++.|+++| +|++++|... ++.+|++|.+.+.++
T Consensus 1 m~iLVtG~~GfiGs~l~~~L~~~g-~V~~~~~~~~------------------------------~~~~Dl~d~~~~~~~ 49 (299)
T PRK09987 1 MNILLFGKTGQVGWELQRALAPLG-NLIALDVHST------------------------------DYCGDFSNPEGVAET 49 (299)
T ss_pred CeEEEECCCCHHHHHHHHHhhccC-CEEEeccccc------------------------------cccCCCCCHHHHHHH
Confidence 479999999999999999999999 7988887531 235899999999999
Q ss_pred hc--CCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC-----CCchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-----GFPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~-----~~~~~~~~~~~~Y 231 (446)
++ ++|+|||||+..... ..++...+++|+.++.+|+++|++.++ +|||+||..++.. ..++++.+|.+.|
T Consensus 50 ~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~~P~~~Y 128 (299)
T PRK09987 50 VRKIRPDVIVNAAAHTAVDKAESEPEFAQLLNATSVEAIAKAANEVGA-WVVHYSTDYVFPGTGDIPWQETDATAPLNVY 128 (299)
T ss_pred HHhcCCCEEEECCccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEccceEECCCCCCCcCCCCCCCCCCHH
Confidence 87 589999999965432 233455578999999999999999986 8999999766321 2344556788899
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcccc-c--------ccceeecccCcccCCc----cCHHHHHHHHHHHHhC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-E--------THNITLSQEDTLFGGQ----VSNLQVAELLACMAKN 298 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~-~--------~~~~~~~~~~~~~~~~----v~~~DvA~ai~~ll~~ 298 (446)
+.+|+.+|++++.+..+++|+|++++|||++... . ...+.+.. ..++.. .+.+|+++++..++..
T Consensus 129 g~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~v~~--d~~g~~~~~~~~~d~~~~~~~~~~~~ 206 (299)
T PRK09987 129 GETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNFAKTMLRLAKEREELSVIN--DQFGAPTGAELLADCTAHAIRVALNK 206 (299)
T ss_pred HHHHHHHHHHHHHhCCCEEEEecceecCCCCCCHHHHHHHHHhcCCCeEEeC--CCcCCCCCHHHHHHHHHHHHHHhhcc
Confidence 9999999999998888999999999999964211 0 00111111 111222 3345566666666654
Q ss_pred CCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
.. .+++||++++...++.++++.+.++.+.
T Consensus 207 ~~--~~giyni~~~~~~s~~e~~~~i~~~~~~ 236 (299)
T PRK09987 207 PE--VAGLYHLVASGTTTWHDYAALVFEEARK 236 (299)
T ss_pred CC--CCCeEEeeCCCCccHHHHHHHHHHHHHh
Confidence 33 2469999999999999999999886544
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.8e-27 Score=230.60 Aligned_cols=214 Identities=17% Similarity=0.116 Sum_probs=170.5
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
+|||||||||||++|+++|+++|++|++++|+ .+|+.|.+.+.+++
T Consensus 1 kilv~G~tG~iG~~l~~~l~~~g~~v~~~~r~----------------------------------~~d~~~~~~~~~~~ 46 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLSPEGRVVVALTSS----------------------------------QLDLTDPEALERLL 46 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHHhcCCEEEEeCCc----------------------------------ccCCCCHHHHHHHH
Confidence 48999999999999999999999999999885 17999999999999
Q ss_pred cCC--CEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC-----CCchhhhchhhHHH
Q 013273 162 GNA--SVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-----GFPAAILNLFWGVL 232 (446)
Q Consensus 162 ~~~--D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~-----~~~~~~~~~~~~Y~ 232 (446)
+++ |+||||||..... .......+++|+.++.+++++|++.+. +||++||..++.. ..++...++...|+
T Consensus 47 ~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~Ss~~vy~~~~~~~~~E~~~~~~~~~Y~ 125 (287)
T TIGR01214 47 RAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARHGA-RLVHISTDYVFDGEGKRPYREDDATNPLNVYG 125 (287)
T ss_pred HhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeeeeecCCCCCCCCCCCCCCCcchhh
Confidence 765 9999999864322 122344578999999999999998886 9999999766432 12233445677899
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCccCCCccccc----------ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCC
Q 013273 233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE----------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS 302 (446)
Q Consensus 233 ~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~----------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~ 302 (446)
.+|..+|++++..+++++++||+++||+++.... ...+.+ ....+..++|++|+|++++.+++++. .
T Consensus 126 ~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~v~v~Dva~a~~~~~~~~~-~ 202 (287)
T TIGR01214 126 QSKLAGEQAIRAAGPNALIVRTSWLYGGGGGRNFVRTMLRLAGRGEELRV--VDDQIGSPTYAKDLARVIAALLQRLA-R 202 (287)
T ss_pred HHHHHHHHHHHHhCCCeEEEEeeecccCCCCCCHHHHHHHHhhcCCCceE--ecCCCcCCcCHHHHHHHHHHHHhhcc-C
Confidence 9999999999988999999999999999742110 001111 11234578999999999999998763 3
Q ss_pred CCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 303 YCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 303 ~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+++||++++...++.++.+++.+.++....
T Consensus 203 ~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~~ 233 (287)
T TIGR01214 203 ARGVYHLANSGQCSWYEFAQAIFEEAGADGL 233 (287)
T ss_pred CCCeEEEECCCCcCHHHHHHHHHHHhCcccc
Confidence 5789999999999999999999999987643
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-27 Score=236.43 Aligned_cols=221 Identities=14% Similarity=0.099 Sum_probs=160.3
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh---hc-HH
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---VQ-IE 158 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---~~-~~ 158 (446)
|||||||||||++|+++|+++|++|+++.|+....... ..++.+|+.|. +. ++
T Consensus 2 ilVtGa~GfiG~~l~~~L~~~g~~~v~~~~~~~~~~~~-----------------------~~~~~~~~~d~~~~~~~~~ 58 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----------------------VNLVDLDIADYMDKEDFLA 58 (308)
T ss_pred EEEecCCcHHHHHHHHHHHhCCCceEEEecCCCcchHH-----------------------HhhhhhhhhhhhhHHHHHH
Confidence 89999999999999999999999888877765322110 01122444443 33 33
Q ss_pred HHh-----cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhchh
Q 013273 159 PAL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLF 228 (446)
Q Consensus 159 ~a~-----~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~ 228 (446)
+++ .++|+|||+||.......+....+++|+.++.+|+++|++.++ +|||+||.+++... .+..+..|.
T Consensus 59 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~~~-~~i~~SS~~vyg~~~~~~~~E~~~~~p~ 137 (308)
T PRK11150 59 QIMAGDDFGDIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTDDFIEEREYEKPL 137 (308)
T ss_pred HHhcccccCCccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHcCC-cEEEEcchHHhCcCCCCCCccCCCCCCC
Confidence 343 2689999999854332233344678999999999999999987 79999998764321 122335667
Q ss_pred hHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccccc---------ce-------eecccCcccCCccCHHHH
Q 013273 229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETH---------NI-------TLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~~~---------~~-------~~~~~~~~~~~~v~~~Dv 288 (446)
+.|+.+|..+|++++. .+++++++||+++||+++...... .+ ..........+++|++|+
T Consensus 138 ~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~g~~~~~r~~i~v~D~ 217 (308)
T PRK11150 138 NVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHKGSMASVAFHLNNQLNNGENPKLFEGSENFKRDFVYVGDV 217 (308)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCCCccchhHHHHHHHHhcCCCCEEecCCCceeeeeeeHHHH
Confidence 7899999999988774 589999999999999975321100 00 011111223468999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
|++++.+++... +++||++++...++.++.+++.++++.
T Consensus 218 a~a~~~~~~~~~---~~~yni~~~~~~s~~el~~~i~~~~~~ 256 (308)
T PRK11150 218 AAVNLWFWENGV---SGIFNCGTGRAESFQAVADAVLAYHKK 256 (308)
T ss_pred HHHHHHHHhcCC---CCeEEcCCCCceeHHHHHHHHHHHhCC
Confidence 999999988653 579999999999999999999999874
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.7e-27 Score=233.80 Aligned_cols=229 Identities=24% Similarity=0.212 Sum_probs=178.7
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
.|||||||||||++|++.|+++|++|++++|...+.... ..++.++.+|++|.+.+.+++
T Consensus 2 ~ILVtG~tGfiG~~l~~~L~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~d~~~~~~~~~~~ 61 (314)
T COG0451 2 RILVTGGAGFIGSHLVERLLAAGHDVRGLDRLRDGLDPL--------------------LSGVEFVVLDLTDRDLVDELA 61 (314)
T ss_pred eEEEEcCcccHHHHHHHHHHhCCCeEEEEeCCCcccccc--------------------ccccceeeecccchHHHHHHH
Confidence 499999999999999999999999999999987653321 046889999999998888888
Q ss_pred cCC-CEEEEcccCCCCccC---CCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------Cch-hhhchhhH
Q 013273 162 GNA-SVVICCIGASEKEVF---DITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPA-AILNLFWG 230 (446)
Q Consensus 162 ~~~-D~VI~~Ag~~~~~~~---~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~-~~~~~~~~ 230 (446)
.++ |+|||+|+....... ++...+++|+.++.+++++|++.++++|||.||.++.... .++ .+..+.+.
T Consensus 62 ~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~~~~v~~ss~~~~~~~~~~~~~~E~~~~~~p~~~ 141 (314)
T COG0451 62 KGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARAAGVKRFVFASSVSVVYGDPPPLPIDEDLGPPRPLNP 141 (314)
T ss_pred hcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCCCceECCCCCCCCcccccCCCCCCCH
Confidence 888 999999996543222 2234689999999999999999999999998886653321 222 24455557
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccccccee------eccc---------CcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHNIT------LSQE---------DTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~~~~~~------~~~~---------~~~~~~~v~~~DvA~a 291 (446)
|+.+|..+|+.++. .|++++++||+++|||++.......+. +... ......++|++|++++
T Consensus 142 Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~ 221 (314)
T COG0451 142 YGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDKPDLSSGVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADA 221 (314)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCCCCCCcCcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHH
Confidence 99999999999874 479999999999999986543110000 1111 1112258999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCC-CCChhhHHHHHHhccCCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAET-TAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~-~~t~~~i~e~l~~i~~~~~~ 333 (446)
++.+++++.. + +||++++. ..+..++.+.+.+..+....
T Consensus 222 ~~~~~~~~~~--~-~~ni~~~~~~~~~~e~~~~~~~~~~~~~~ 261 (314)
T COG0451 222 LLLALENPDG--G-VFNIGSGTAEITVRELAEAVAEAVGSKAP 261 (314)
T ss_pred HHHHHhCCCC--c-EEEeCCCCCcEEHHHHHHHHHHHhCCCCc
Confidence 9999998862 3 99999997 78999999999999988765
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=5e-27 Score=231.96 Aligned_cols=235 Identities=12% Similarity=0.056 Sum_probs=175.3
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|||||||||||++++++|+++| ++|++++|....... +.+... ...++++++.+|+.|.+++.+
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~--~~~~~~-----------~~~~~~~~~~~Dl~~~~~~~~ 67 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNL--ENLADL-----------EDNPRYRFVKGDIGDRELVSR 67 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhh--hhhhhh-----------ccCCCcEEEEcCCcCHHHHHH
Confidence 48999999999999999999987 789988874321110 011111 011478999999999999999
Q ss_pred HhcC--CCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccccCC------CCchhhhchh
Q 013273 160 ALGN--ASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKF------GFPAAILNLF 228 (446)
Q Consensus 160 a~~~--~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~~~~------~~~~~~~~~~ 228 (446)
++++ +|+|||+|+... ....++...+++|+.++.+++++|.+.+.+ +||++||..++.. ..+.....+.
T Consensus 68 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~Ss~~v~g~~~~~~~~~e~~~~~~~ 147 (317)
T TIGR01181 68 LFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHISTDEVYGDLEKGDAFTETTPLAPS 147 (317)
T ss_pred HHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEeeccceeCCCCCCCCcCCCCCCCCC
Confidence 9987 899999998643 223345566889999999999999887544 8999999766332 1222344566
Q ss_pred hHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHHHHH
Q 013273 229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
..|+.+|+.+|.+++ +.+++++++||+.+||++.... ....+.+...+....+++|++|+|+++.
T Consensus 148 ~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~ 227 (317)
T TIGR01181 148 SPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQFPEKLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIY 227 (317)
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHH
Confidence 789999999998875 4799999999999999964211 0111111112223447899999999999
Q ss_pred HHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
.++++.. .+++||++++..+++.++++++.++++..
T Consensus 228 ~~~~~~~--~~~~~~~~~~~~~s~~~~~~~i~~~~~~~ 263 (317)
T TIGR01181 228 LVLEKGR--VGETYNIGGGNERTNLEVVETILELLGKD 263 (317)
T ss_pred HHHcCCC--CCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 9998653 46899999999999999999999999864
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.2e-27 Score=257.67 Aligned_cols=237 Identities=14% Similarity=0.135 Sum_probs=179.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++|+|||||||||||++|++.|+++ |++|++++|.. .....+.. .....+++++.+|+.|.
T Consensus 5 ~~~~VLVTGatGfIG~~lv~~Ll~~g~~~~V~~~d~~~~~~~~~~l~~---------------~~~~~~v~~~~~Dl~d~ 69 (668)
T PLN02260 5 EPKNILITGAAGFIASHVANRLIRNYPDYKIVVLDKLDYCSNLKNLNP---------------SKSSPNFKFVKGDIASA 69 (668)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHhCCCCEEEEEeCCCccchhhhhhh---------------cccCCCeEEEECCCCCh
Confidence 4579999999999999999999998 68999998853 12111110 01125799999999999
Q ss_pred hcHHHHh--cCCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC--------Cc
Q 013273 155 VQIEPAL--GNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG--------FP 221 (446)
Q Consensus 155 ~~~~~a~--~~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~--------~~ 221 (446)
+.+..++ .++|+|||+|+..... ..+....+++|+.++.+|+++|++.+ ++||||+||..++... .+
T Consensus 70 ~~~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~SS~~vyg~~~~~~~~~~~E 149 (668)
T PLN02260 70 DLVNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHVSTDEVYGETDEDADVGNHE 149 (668)
T ss_pred HHHHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEcchHHhCCCccccccCccc
Confidence 8888776 6899999999965322 22334567899999999999999987 8999999998764321 12
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-----------ccceeecccCcccCCccCHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~v~~~ 286 (446)
+....|.+.|+.+|..+|++++. .+++++++||+++||+++.... ...+.+........+++|++
T Consensus 150 ~~~~~p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~~~~~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~ 229 (668)
T PLN02260 150 ASQLLPTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQFPEKLIPKFILLAMQGKPLPIHGDGSNVRSYLYCE 229 (668)
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCCCcccHHHHHHHHHhCCCCeEEecCCCceEeeEEHH
Confidence 23344677899999999999863 6999999999999999753210 11112222233344789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
|+|++++.++++.. .+++|||+++...++.++.+.+.+++|...
T Consensus 230 Dva~a~~~~l~~~~--~~~vyni~~~~~~s~~el~~~i~~~~g~~~ 273 (668)
T PLN02260 230 DVAEAFEVVLHKGE--VGHVYNIGTKKERRVIDVAKDICKLFGLDP 273 (668)
T ss_pred HHHHHHHHHHhcCC--CCCEEEECCCCeeEHHHHHHHHHHHhCCCC
Confidence 99999999987653 478999999999999999999999998654
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=7.3e-26 Score=217.96 Aligned_cols=229 Identities=38% Similarity=0.551 Sum_probs=171.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-hh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~ 155 (446)
...+|+||||||||+||++++++|+++|++|+++.|+.++...+.. ...+++++.+|+.| ..
T Consensus 14 ~~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~-----------------~~~~~~~~~~Dl~d~~~ 76 (251)
T PLN00141 14 NVKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLP-----------------QDPSLQIVRADVTEGSD 76 (251)
T ss_pred cccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcc-----------------cCCceEEEEeeCCCCHH
Confidence 4557899999999999999999999999999999999876443211 01468999999998 46
Q ss_pred cHHHHh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch------hhhchh
Q 013273 156 QIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------AILNLF 228 (446)
Q Consensus 156 ~~~~a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~------~~~~~~ 228 (446)
.+.+.+ .++|+||||+|.... .+....+++|+.++.++++++++.+++|||++||.+++....+. ...+..
T Consensus 77 ~l~~~~~~~~d~vi~~~g~~~~--~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~v~g~~~~~~~~~~~~~~~~~ 154 (251)
T PLN00141 77 KLVEAIGDDSDAVICATGFRRS--FDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSILVNGAAMGQILNPAYIFLNLF 154 (251)
T ss_pred HHHHHhhcCCCEEEECCCCCcC--CCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccccccCCCcccccCcchhHHHHH
Confidence 677778 689999999886421 12334568899999999999999999999999998763321111 111223
Q ss_pred hHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEE
Q 013273 229 WGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE 308 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~n 308 (446)
..|...|..+|+++++.|+++++||||++++.... ..+.+......+.++||++|||+++++++.++. ..+.+++
T Consensus 155 ~~~~~~k~~~e~~l~~~gi~~~iirpg~~~~~~~~----~~~~~~~~~~~~~~~i~~~dvA~~~~~~~~~~~-~~~~~~~ 229 (251)
T PLN00141 155 GLTLVAKLQAEKYIRKSGINYTIVRPGGLTNDPPT----GNIVMEPEDTLYEGSISRDQVAEVAVEALLCPE-SSYKVVE 229 (251)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEECCCccCCCCC----ceEEECCCCccccCcccHHHHHHHHHHHhcChh-hcCcEEE
Confidence 34566899999999999999999999999976321 122222233344578999999999999998876 5678899
Q ss_pred EecCCCCChhhHHHHHHhccC
Q 013273 309 VIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 309 i~~~~~~t~~~i~e~l~~i~~ 329 (446)
+++...-...++.+++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 230 IVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred EecCCCCCchhHHHHHHHhhc
Confidence 998665555677777776653
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.4e-26 Score=231.88 Aligned_cols=240 Identities=15% Similarity=0.103 Sum_probs=175.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|++.|+++|++|++++|...........+... ...++.++.+|+.|.+.+.++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~~~~~ 68 (338)
T PRK10675 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIERL------------GGKHPTFVEGDIRNEALLTEI 68 (338)
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHHHh------------cCCCceEEEccCCCHHHHHHH
Confidence 57999999999999999999999999999987543222221112111 014578899999999999998
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhh-chhhH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL-NLFWG 230 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~-~~~~~ 230 (446)
+. ++|+|||+||.... ...+....+++|+.++.+++++|+++++++||++||.+++... .++.+. .+...
T Consensus 69 ~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~yg~~~~~~~~E~~~~~~p~~~ 148 (338)
T PRK10675 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNLIFSSSATVYGDQPKIPYVESFPTGTPQSP 148 (338)
T ss_pred HhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhhCCCCCCccccccCCCCCCCh
Confidence 85 68999999986432 1223345678899999999999999999999999998763211 122222 46778
Q ss_pred HHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCcc--ccc--------------------ccceeecc------cCc
Q 013273 231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDA--YKE--------------------THNITLSQ------EDT 277 (446)
Q Consensus 231 Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~--~~~--------------------~~~~~~~~------~~~ 277 (446)
|+.+|..+|++++. .+++++++|++.+||+... +.. ...+.+.. .+.
T Consensus 149 Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 228 (338)
T PRK10675 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCc
Confidence 99999999998863 3789999999888886311 000 00010100 112
Q ss_pred ccCCccCHHHHHHHHHHHHhCC-CCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~-~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
...+++|++|+|++++.++++. ....+++|||+++..+++.++.+++.+.++...
T Consensus 229 ~~~~~v~v~D~a~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 284 (338)
T PRK10675 229 GVRDYIHVMDLADGHVAAMEKLANKPGVHIYNLGAGVGSSVLDVVNAFSKACGKPV 284 (338)
T ss_pred EEEeeEEHHHHHHHHHHHHHhhhccCCCceEEecCCCceeHHHHHHHHHHHhCCCC
Confidence 2346899999999999998752 113468999999999999999999999998653
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.5e-26 Score=232.41 Aligned_cols=241 Identities=13% Similarity=-0.017 Sum_probs=178.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHH-HHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE-NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~-~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++||||||+||||++|+++|+++|++|++++|+.+... ...+.+... ......++.++.+|++|.+++
T Consensus 5 ~~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~Dl~d~~~~ 75 (340)
T PLN02653 5 PRKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSSNFNTQRLDHIYID---------PHPNKARMKLHYGDLSDASSL 75 (340)
T ss_pred CCCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccccccccchhhhccc---------cccccCceEEEEecCCCHHHH
Confidence 4578999999999999999999999999999998754211 001111000 000114689999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCC-----EEEEEccccccCC----CCchhh
Q 013273 158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKF----GFPAAI 224 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-----r~V~vSS~~~~~~----~~~~~~ 224 (446)
.+++.. +|+|||||+.... ...++...+++|+.|+.+++++|++.+++ +||++||..++.. ..++.+
T Consensus 76 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~~~~~~E~~~ 155 (340)
T PLN02653 76 RRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGSTPPPQSETTP 155 (340)
T ss_pred HHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCCCCCCCCCCC
Confidence 999874 6999999996432 22344556789999999999999988865 8999999766332 123344
Q ss_pred hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc--------------ccce-eecccCcccCCccCH
Q 013273 225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE--------------THNI-TLSQEDTLFGGQVSN 285 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~--------------~~~~-~~~~~~~~~~~~v~~ 285 (446)
..+.+.|+.+|+.+|.+++ ++|+.++..|+.++|||+..... .... ...........++|+
T Consensus 156 ~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v 235 (340)
T PLN02653 156 FHPRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFA 235 (340)
T ss_pred CCCCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCCcccchhHHHHHHHHHHcCCCCceEeCCCcceecceeH
Confidence 5677889999999999885 36888889999999998532110 0001 111222334478999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+|+|++++.++++.. +++|||+++...++.++++.+.++.+..
T Consensus 236 ~D~a~a~~~~~~~~~---~~~yni~~g~~~s~~e~~~~i~~~~g~~ 278 (340)
T PLN02653 236 GDYVEAMWLMLQQEK---PDDYVVATEESHTVEEFLEEAFGYVGLN 278 (340)
T ss_pred HHHHHHHHHHHhcCC---CCcEEecCCCceeHHHHHHHHHHHcCCC
Confidence 999999999998753 5789999999999999999999998753
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.95 E-value=3.7e-27 Score=223.29 Aligned_cols=209 Identities=28% Similarity=0.261 Sum_probs=166.2
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|||||||||||++|+++|+++|++|+.+.|+.......... .++.++.+|+.|.+.+++++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~------------------~~~~~~~~dl~~~~~~~~~~~ 62 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKK------------------LNVEFVIGDLTDKEQLEKLLE 62 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHH------------------TTEEEEESETTSHHHHHHHHH
T ss_pred EEEEccCCHHHHHHHHHHHHcCCcccccccccccccccccc------------------ceEEEEEeecccccccccccc
Confidence 79999999999999999999999999999988755432110 379999999999999999997
Q ss_pred CC--CEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHHH
Q 013273 163 NA--SVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL 233 (446)
Q Consensus 163 ~~--D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~~ 233 (446)
.. |+|||+|+... ....+....++.|+.++.+++++|++.++++||++||..++... .++....+.+.|+.
T Consensus 63 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~sS~~~y~~~~~~~~~e~~~~~~~~~Y~~ 142 (236)
T PF01370_consen 63 KANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAAREAGVKRFIFLSSASVYGDPDGEPIDEDSPINPLSPYGA 142 (236)
T ss_dssp HHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEEGGGGTSSSSSSBETTSGCCHSSHHHH
T ss_pred ccCceEEEEeeccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 65 99999998752 22234555678899999999999999999999999998774433 22334467788999
Q ss_pred HHHHHHHHHHh----CCCCEEEEecCCccCCC---ccc-----------ccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 234 WKRKAEEALIA----SGLPYTIVRPGGMERPT---DAY-----------KETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 234 sK~~~E~~l~~----~gl~~tivRPg~v~gp~---~~~-----------~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
+|...|++++. .+++++++||+.+||+. ... .....+.+........+++|++|+|++++.+
T Consensus 143 ~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~ 222 (236)
T PF01370_consen 143 SKRAAEELLRDYAKKYGLRVTILRPPNVYGPGNPNNNSSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAA 222 (236)
T ss_dssp HHHHHHHHHHHHHHHHTSEEEEEEESEEESTTSSSSSTSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHH
Confidence 99999999873 59999999999999998 111 1112133333344456789999999999999
Q ss_pred HhCCCCCCCcEEEEe
Q 013273 296 AKNRSLSYCKVVEVI 310 (446)
Q Consensus 296 l~~~~~~~~~v~ni~ 310 (446)
++++. ..+++|||+
T Consensus 223 ~~~~~-~~~~~yNig 236 (236)
T PF01370_consen 223 LENPK-AAGGIYNIG 236 (236)
T ss_dssp HHHSC-TTTEEEEES
T ss_pred HhCCC-CCCCEEEeC
Confidence 99987 689999985
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.95 E-value=1.6e-26 Score=229.76 Aligned_cols=230 Identities=26% Similarity=0.195 Sum_probs=175.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+||||+||||+++++.|+++|++|++++|+.+....+ ...+++++.+|+.|.++++++
T Consensus 1 ~~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~~~~~l~~~ 61 (328)
T TIGR03466 1 MKVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNL-------------------EGLDVEIVEGDLRDPASLRKA 61 (328)
T ss_pred CeEEEECCccchhHHHHHHHHHCCCEEEEEEecCcccccc-------------------ccCCceEEEeeCCCHHHHHHH
Confidence 4799999999999999999999999999999987643221 013688999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------Cchhhhc---hhhHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILN---LFWGV 231 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~---~~~~Y 231 (446)
+.++|+|||+|+.......++...+++|+.++.++++++++.++++||++||..++... .++.+.. ....|
T Consensus 62 ~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~~~~~~Y 141 (328)
T TIGR03466 62 VAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALEAGVERVVYTSSVATLGVRGDGTPADETTPSSLDDMIGHY 141 (328)
T ss_pred HhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCcCCCCCCcCccCCCCcccccChH
Confidence 99999999999854333334556688999999999999999999999999997664321 1122222 24579
Q ss_pred HHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccccc-cceee---ccc----CcccCCccCHHHHHHHHHHHHhCC
Q 013273 232 LLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET-HNITL---SQE----DTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 232 ~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~~-~~~~~---~~~----~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
+.+|..+|+++++ .|++++++||+.+||++...... ..+.. ... .....+++|++|+|++++.++++.
T Consensus 142 ~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~a~~~~~~~~ 221 (328)
T TIGR03466 142 KRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDIKPTPTGRIIVDFLNGKMPAYVDTGLNLVHVDDVAEGHLLALERG 221 (328)
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCCCCCcHHHHHHHHHcCCCceeeCCCcceEEHHHHHHHHHHHHhCC
Confidence 9999999998874 69999999999999997532110 00000 000 011235899999999999999875
Q ss_pred CCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 300 ~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
. .++.|++. +...++.++.+.+.+++|...
T Consensus 222 ~--~~~~~~~~-~~~~s~~e~~~~i~~~~g~~~ 251 (328)
T TIGR03466 222 R--IGERYILG-GENLTLKQILDKLAEITGRPA 251 (328)
T ss_pred C--CCceEEec-CCCcCHHHHHHHHHHHhCCCC
Confidence 3 46788775 677899999999999998653
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.94 E-value=8.9e-25 Score=218.86 Aligned_cols=378 Identities=29% Similarity=0.353 Sum_probs=246.3
Q ss_pred cccccccccccccCCCCcCcceeeccccceeeecCCCCCCCCCCcCccccccccccCCccccccCCCCCCCCCCCCCCCE
Q 013273 3 ICSLQSQTLSTIPSPLSRNGLIVKSFGSCQILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNL 82 (446)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 82 (446)
.|+++.+++++.|..-.+.++..+.|-...-.+.+.+....+...++..+.+.................+.+..+.+.++
T Consensus 2 ~s~~~~~~lst~~~~~~~~~~~~~~~~v~~~~~~~~~~~~s~~~~s~s~~~~~~~~~~~~~~~~e~~v~~~~~~~~~~~~ 81 (411)
T KOG1203|consen 2 ASFLMAASLSTNPKLPFYISFRIPRFQVRSKIRASPLQSSSSFFSSRSSRKRKTPISPVTGTTSEAEVSPPNNNSKKPTT 81 (411)
T ss_pred cccccccccccCCCCccccccccccceeccceeccccCCCCCcccccchhhccCCCCccccccceeeeccCCCCCCCCCe
Confidence 48899999999988777776666666555433333333333444444334333333222111111111233344677789
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH-HHh
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE-PAL 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~-~a~ 161 (446)
|+|+||||.+|+.+++.|+++|+.|++++|+.++...+... .+....+..+..|.....++. .++
T Consensus 82 VlVvGatG~vG~~iv~~llkrgf~vra~VRd~~~a~~~~~~--------------~~~d~~~~~v~~~~~~~~d~~~~~~ 147 (411)
T KOG1203|consen 82 VLVVGATGKVGRRIVKILLKRGFSVRALVRDEQKAEDLLGV--------------FFVDLGLQNVEADVVTAIDILKKLV 147 (411)
T ss_pred EEEecCCCchhHHHHHHHHHCCCeeeeeccChhhhhhhhcc--------------cccccccceeeeccccccchhhhhh
Confidence 99999999999999999999999999999999988876540 011245566666666554443 333
Q ss_pred c----CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 162 G----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 162 ~----~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
+ ...+++.|+|...... |....+.+++.|++|+++||+.+|++|||++|+++...+..+......++.+..+|+.
T Consensus 148 ~~~~~~~~~v~~~~ggrp~~e-d~~~p~~VD~~g~knlvdA~~~aGvk~~vlv~si~~~~~~~~~~~~~~~~~~~~~k~~ 226 (411)
T KOG1203|consen 148 EAVPKGVVIVIKGAGGRPEEE-DIVTPEKVDYEGTKNLVDACKKAGVKRVVLVGSIGGTKFNQPPNILLLNGLVLKAKLK 226 (411)
T ss_pred hhccccceeEEecccCCCCcc-cCCCcceecHHHHHHHHHHHHHhCCceEEEEEeecCcccCCCchhhhhhhhhhHHHHh
Confidence 2 3457777776543322 5566788999999999999999999999999999987776655444446678899999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCC--ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG--QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~--~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+|++++++|++|+|||+|.++.....................++ .+...|+|+.++.++.++......+.+++.....
T Consensus 227 ~e~~~~~Sgl~ytiIR~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~r~~vael~~~all~~~~~~~k~~~~v~~~~g 306 (411)
T KOG1203|consen 227 AEKFLQDSGLPYTIIRPGGLEQDTGGQREVVVDDEKELLTVDGGAYSISRLDVAELVAKALLNEAATFKKVVELVLKPEG 306 (411)
T ss_pred HHHHHHhcCCCcEEEeccccccCCCCcceecccCccccccccccceeeehhhHHHHHHHHHhhhhhccceeEEeecCCCC
Confidence 99999999999999999999865432222211111111222223 7999999999999999988667788888887776
Q ss_pred ChhhHHHHHHhccCCCCCCCCCCCCCCCCCCCCCCcccCCC-CCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q 013273 316 PLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEES-SAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTP 394 (446)
Q Consensus 316 t~~~i~e~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Plspy~~~~~lkp~~~p~~~~ 394 (446)
+...+..+++-+..............++....-+....... ....-....+.....++| ++|..|.+.+++..+.+-.
T Consensus 307 pg~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~ 385 (411)
T KOG1203|consen 307 PGRPYKVLLELFPLDESSQTYPVFAARPTEAGFCRVVPFSAFRPANKEDPPLDPGLSERP-ARFSSLIQDPVDGLAGEQQ 385 (411)
T ss_pred CCccHHHHHhhcccccccccccceeccccccceeEecccccccccccccCccccccccCc-chhhhhccCCCcccccccc
Confidence 66666666666655554433333333332222111111111 111111122344456689 9999999999999999866
Q ss_pred CC
Q 013273 395 ST 396 (446)
Q Consensus 395 ~~ 396 (446)
+.
T Consensus 386 t~ 387 (411)
T KOG1203|consen 386 TL 387 (411)
T ss_pred cc
Confidence 65
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.4e-26 Score=230.11 Aligned_cols=224 Identities=16% Similarity=0.187 Sum_probs=165.9
Q ss_pred CCCCEEEEE----CCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH----HHHHhhhcccccccCCCCCCceEEEEc
Q 013273 78 KDDNLAFVA----GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ----SVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 78 ~~~~~VlVt----GatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~----~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
.++++|||| |||||||++|++.|+++||+|++++|+......+.. .+..+ ...+++++.+
T Consensus 50 ~~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l------------~~~~v~~v~~ 117 (378)
T PLN00016 50 VEKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSEL------------SSAGVKTVWG 117 (378)
T ss_pred cccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHh------------hhcCceEEEe
Confidence 345789999 999999999999999999999999998764322110 00000 0135899999
Q ss_pred CCCChhcHHHHh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC--chhhh
Q 013273 150 DLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--PAAIL 225 (446)
Q Consensus 150 Dl~d~~~~~~a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~--~~~~~ 225 (446)
|+.| +.+++ .++|+|||+++. ++.++.+++++|++.|++||||+||.+++.... +....
T Consensus 118 D~~d---~~~~~~~~~~d~Vi~~~~~--------------~~~~~~~ll~aa~~~gvkr~V~~SS~~vyg~~~~~p~~E~ 180 (378)
T PLN00016 118 DPAD---VKSKVAGAGFDVVYDNNGK--------------DLDEVEPVADWAKSPGLKQFLFCSSAGVYKKSDEPPHVEG 180 (378)
T ss_pred cHHH---HHhhhccCCccEEEeCCCC--------------CHHHHHHHHHHHHHcCCCEEEEEccHhhcCCCCCCCCCCC
Confidence 9987 44444 579999999753 356789999999999999999999988743211 11111
Q ss_pred chhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccc----------cccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK----------ETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~----------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.+...+. +|..+|.++++.+++++++||+++||+++... ....+.+...+....+++|++|+|++++.+
T Consensus 181 ~~~~p~~-sK~~~E~~l~~~~l~~~ilRp~~vyG~~~~~~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~ 259 (378)
T PLN00016 181 DAVKPKA-GHLEVEAYLQKLGVNWTSFRPQYIYGPGNNKDCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALV 259 (378)
T ss_pred CcCCCcc-hHHHHHHHHHHcCCCeEEEeceeEECCCCCCchHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHH
Confidence 1111122 89999999999999999999999999964321 111122222233345689999999999999
Q ss_pred HhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 296 l~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+.++. ..+++||++++..+++.++.+++.+.+|...
T Consensus 260 l~~~~-~~~~~yni~~~~~~s~~el~~~i~~~~g~~~ 295 (378)
T PLN00016 260 VGNPK-AAGQIFNIVSDRAVTFDGMAKACAKAAGFPE 295 (378)
T ss_pred hcCcc-ccCCEEEecCCCccCHHHHHHHHHHHhCCCC
Confidence 99865 4579999999999999999999999998765
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.2e-26 Score=223.35 Aligned_cols=226 Identities=14% Similarity=0.089 Sum_probs=169.2
Q ss_pred EEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
|||||||||||+++++.|+++|+ +|++++|..... .+. .. . ...+.+|+.+.+.++.+.
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~----~~--------------~-~~~~~~d~~~~~~~~~~~ 60 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL----NL--------------A-DLVIADYIDKEDFLDRLE 60 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh----hh--------------h-heeeeccCcchhHHHHHH
Confidence 69999999999999999999997 788887754321 110 00 1 134668888887777765
Q ss_pred ----cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----Cchh-hhchhhHHH
Q 013273 162 ----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAA-ILNLFWGVL 232 (446)
Q Consensus 162 ----~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----~~~~-~~~~~~~Y~ 232 (446)
.++|+|||||+.......++...+++|+.++.+++++|.++++ +||++||.+++... .+++ ...+.+.|+
T Consensus 61 ~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~-~~v~~SS~~vy~~~~~~~~e~~~~~~p~~~Y~ 139 (314)
T TIGR02197 61 KGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAEKGI-PFIYASSAATYGDGEAGFREGRELERPLNVYG 139 (314)
T ss_pred hhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHHhCC-cEEEEccHHhcCCCCCCcccccCcCCCCCHHH
Confidence 4799999999975444455666788999999999999999887 89999998774321 1111 234677899
Q ss_pred HHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccc---------------cceeec------ccCcccCCccCH
Q 013273 233 LWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET---------------HNITLS------QEDTLFGGQVSN 285 (446)
Q Consensus 233 ~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~---------------~~~~~~------~~~~~~~~~v~~ 285 (446)
.+|..+|.++++ .+++++++|++.+||+++..... ..+.+. ..+....+++|+
T Consensus 140 ~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v 219 (314)
T TIGR02197 140 YSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPREYHKGKMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYV 219 (314)
T ss_pred HHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCCCCCCCcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEH
Confidence 999999998864 35789999999999997532110 011111 012223468999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+|++++++.++... .+++||++++...++.++.+.+.+++|...
T Consensus 220 ~D~a~~i~~~~~~~---~~~~yni~~~~~~s~~e~~~~i~~~~g~~~ 263 (314)
T TIGR02197 220 KDVVDVNLWLLENG---VSGIFNLGTGRARSFNDLADAVFKALGKDE 263 (314)
T ss_pred HHHHHHHHHHHhcc---cCceEEcCCCCCccHHHHHHHHHHHhCCCC
Confidence 99999999999872 367999999999999999999999998653
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=99.94 E-value=6e-26 Score=212.73 Aligned_cols=231 Identities=23% Similarity=0.252 Sum_probs=189.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+-++.|+|||||+|+++|..|.+.|.+|++-.|..+... ..+|+-|+. +++.+...|+.|+++
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~------r~lkvmGdL--------GQvl~~~fd~~DedS 123 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDP------RHLKVMGDL--------GQVLFMKFDLRDEDS 123 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccch------hheeecccc--------cceeeeccCCCCHHH
Confidence 456678999999999999999999999999999999665322 223444443 789999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 236 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (446)
|.++++...+|||+.|..-. ......+++|+.++..|++.|++.|+.||||+|+.+.+. ..-+-|..+|.
T Consensus 124 Ir~vvk~sNVVINLIGrd~e--Tknf~f~Dvn~~~aerlAricke~GVerfIhvS~Lganv--------~s~Sr~LrsK~ 193 (391)
T KOG2865|consen 124 IRAVVKHSNVVINLIGRDYE--TKNFSFEDVNVHIAERLARICKEAGVERFIHVSCLGANV--------KSPSRMLRSKA 193 (391)
T ss_pred HHHHHHhCcEEEEeeccccc--cCCcccccccchHHHHHHHHHHhhChhheeehhhccccc--------cChHHHHHhhh
Confidence 99999999999999995221 122345689999999999999999999999999988542 22345899999
Q ss_pred HHHHHHHhCCCCEEEEecCCccCCCcccc---------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEE
Q 013273 237 KAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 237 ~~E~~l~~~gl~~tivRPg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
.+|..+++.-...||+||..|||..|++. ......+..+......+|++-|||.+|+.+++++. +.|++|
T Consensus 194 ~gE~aVrdafPeAtIirPa~iyG~eDrfln~ya~~~rk~~~~pL~~~GekT~K~PVyV~DVaa~IvnAvkDp~-s~Gkty 272 (391)
T KOG2865|consen 194 AGEEAVRDAFPEATIIRPADIYGTEDRFLNYYASFWRKFGFLPLIGKGEKTVKQPVYVVDVAAAIVNAVKDPD-SMGKTY 272 (391)
T ss_pred hhHHHHHhhCCcceeechhhhcccchhHHHHHHHHHHhcCceeeecCCcceeeccEEEehHHHHHHHhccCcc-ccCcee
Confidence 99999999989999999999999988752 11122233334445578999999999999999997 899999
Q ss_pred EEecCCCCChhhHHHHHHhccCCCC
Q 013273 308 EVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 308 ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+.+++....+.++.+++.++...-.
T Consensus 273 e~vGP~~yql~eLvd~my~~~~~~~ 297 (391)
T KOG2865|consen 273 EFVGPDRYQLSELVDIMYDMAREWP 297 (391)
T ss_pred eecCCchhhHHHHHHHHHHHHhhcc
Confidence 9999999999999999988876633
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.94 E-value=1.9e-25 Score=243.33 Aligned_cols=236 Identities=18% Similarity=0.136 Sum_probs=173.6
Q ss_pred CEEEEECCCcHHHHHHHHHHH--HCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh----
Q 013273 81 NLAFVAGATGKVGSRTVRELL--KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---- 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~--~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---- 154 (446)
|+|||||||||||++|++.|+ +.|++|++++|+... ..+....... ...+++++.+|++|+
T Consensus 1 m~ILVTGatGfIG~~lv~~Ll~~~~g~~V~~l~R~~~~-~~~~~~~~~~------------~~~~v~~~~~Dl~~~~~~~ 67 (657)
T PRK07201 1 MRYFVTGGTGFIGRRLVSRLLDRRREATVHVLVRRQSL-SRLEALAAYW------------GADRVVPLVGDLTEPGLGL 67 (657)
T ss_pred CeEEEeCCccHHHHHHHHHHHhcCCCCEEEEEECcchH-HHHHHHHHhc------------CCCcEEEEecccCCccCCc
Confidence 479999999999999999999 579999999996533 2221111110 115799999999984
Q ss_pred --hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC----chh---hh
Q 013273 155 --VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAA---IL 225 (446)
Q Consensus 155 --~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~----~~~---~~ 225 (446)
+.++++ .++|+||||||..... ......+++|+.++.+++++|++.++++|||+||.+++.... ++. ..
T Consensus 68 ~~~~~~~l-~~~D~Vih~Aa~~~~~-~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~~SS~~v~g~~~~~~~e~~~~~~~ 145 (657)
T PRK07201 68 SEADIAEL-GDIDHVVHLAAIYDLT-ADEEAQRAANVDGTRNVVELAERLQAATFHHVSSIAVAGDYEGVFREDDFDEGQ 145 (657)
T ss_pred CHHHHHHh-cCCCEEEECceeecCC-CCHHHHHHHHhHHHHHHHHHHHhcCCCeEEEEeccccccCccCccccccchhhc
Confidence 345555 8999999999865432 233445788999999999999999999999999987743211 111 12
Q ss_pred chhhHHHHHHHHHHHHHH-hCCCCEEEEecCCccCCCcccccc------------cc-------eeecccCcccCCccCH
Q 013273 226 NLFWGVLLWKRKAEEALI-ASGLPYTIVRPGGMERPTDAYKET------------HN-------ITLSQEDTLFGGQVSN 285 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~-~~gl~~tivRPg~v~gp~~~~~~~------------~~-------~~~~~~~~~~~~~v~~ 285 (446)
.+...|+.+|+.+|++++ ..|++++++||+++||+....... .. +.+........+++|+
T Consensus 146 ~~~~~Y~~sK~~~E~~~~~~~g~~~~ilRp~~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v 225 (657)
T PRK07201 146 GLPTPYHRTKFEAEKLVREECGLPWRVYRPAVVVGDSRTGEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPV 225 (657)
T ss_pred CCCCchHHHHHHHHHHHHHcCCCcEEEEcCCeeeecCCCCccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeH
Confidence 234579999999999998 478999999999999985321000 00 0000011112357999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+|++++++.++..+. ..+++||++++...++.++.+.+.+.+|...
T Consensus 226 ddva~ai~~~~~~~~-~~g~~~ni~~~~~~s~~el~~~i~~~~g~~~ 271 (657)
T PRK07201 226 DYVADALDHLMHKDG-RDGQTFHLTDPKPQRVGDIYNAFARAAGAPP 271 (657)
T ss_pred HHHHHHHHHHhcCcC-CCCCEEEeCCCCCCcHHHHHHHHHHHhCCCc
Confidence 999999999988654 5688999999999999999999999998765
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.94 E-value=9.1e-26 Score=222.58 Aligned_cols=213 Identities=19% Similarity=0.146 Sum_probs=162.2
Q ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc-
Q 013273 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG- 162 (446)
Q Consensus 84 lVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~- 162 (446)
||||||||||++|++.|+++|++|+++.+.. .+|+.|.+++.+++.
T Consensus 1 lItGa~GfiG~~l~~~L~~~g~~v~~~~~~~---------------------------------~~Dl~~~~~l~~~~~~ 47 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLEALGFTNLVLRTHK---------------------------------ELDLTRQADVEAFFAK 47 (306)
T ss_pred CcccCCCcccHHHHHHHHhCCCcEEEeeccc---------------------------------cCCCCCHHHHHHHHhc
Confidence 6999999999999999999999988764321 289999999999886
Q ss_pred -CCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchh----hhchhh
Q 013273 163 -NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAA----ILNLFW 229 (446)
Q Consensus 163 -~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~----~~~~~~ 229 (446)
++|+|||||+.... ...++...+++|+.++.+|+++|++++++|||++||..++... .++. +..+..
T Consensus 48 ~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~~p~~ 127 (306)
T PLN02725 48 EKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYRHGVKKLLFLGSSCIYPKFAPQPIPETALLTGPPEPTN 127 (306)
T ss_pred cCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHHcCCCeEEEeCceeecCCCCCCCCCHHHhccCCCCCCc
Confidence 47999999986421 2234455678999999999999999999999999998774321 1111 222333
Q ss_pred -HHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc-------------------cceee-cccCcccCCccC
Q 013273 230 -GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-------------------HNITL-SQEDTLFGGQVS 284 (446)
Q Consensus 230 -~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~-------------------~~~~~-~~~~~~~~~~v~ 284 (446)
.|+.+|..+|++++ ..+++++++||+++||+++.+... ..+.+ .........+||
T Consensus 128 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~ 207 (306)
T PLN02725 128 EWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHDNFHPENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLH 207 (306)
T ss_pred chHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCCCCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeecccc
Confidence 49999999998765 479999999999999997542110 00111 112233347899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++|++++++.++++.. ..+.||++++...++.++.+++.++++..
T Consensus 208 v~Dv~~~~~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~~~~ 252 (306)
T PLN02725 208 VDDLADAVVFLMRRYS--GAEHVNVGSGDEVTIKELAELVKEVVGFE 252 (306)
T ss_pred HHHHHHHHHHHHhccc--cCcceEeCCCCcccHHHHHHHHHHHhCCC
Confidence 9999999999998753 35678999999999999999999998753
|
|
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.94 E-value=4.3e-25 Score=219.00 Aligned_cols=238 Identities=21% Similarity=0.165 Sum_probs=175.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
+|||||||||||++|++.|+++|++|++++|...........+. ...+++++.+|+.|.+++.+++
T Consensus 1 kvlV~GatG~iG~~l~~~l~~~g~~V~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~~~~~ 66 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLLESGHEVVVLDNLSNGSPEALKRGE--------------RITRVTFVEGDLRDRELLDRLF 66 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHHhCCCeEEEEeCCCccchhhhhhhc--------------cccceEEEECCCCCHHHHHHHH
Confidence 48999999999999999999999999988764332221111110 0126888999999999999988
Q ss_pred c--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHH
Q 013273 162 G--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL 232 (446)
Q Consensus 162 ~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~ 232 (446)
. ++|+||||||.... ...+....+++|+.++.+++++|.+.++++||++||.+++... .++....+...|+
T Consensus 67 ~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~ss~~~~g~~~~~~~~e~~~~~~~~~y~ 146 (328)
T TIGR01179 67 EEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQTGVKKFIFSSSAAVYGEPSSIPISEDSPLGPINPYG 146 (328)
T ss_pred HhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhcCCCEEEEecchhhcCCCCCCCccccCCCCCCCchH
Confidence 5 69999999986422 2234455678899999999999999998999999997653211 2233345667899
Q ss_pred HHHHHHHHHHHh-----CCCCEEEEecCCccCCCcccc-------cc--------------cceeecc------cCcccC
Q 013273 233 LWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYK-------ET--------------HNITLSQ------EDTLFG 280 (446)
Q Consensus 233 ~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~-------~~--------------~~~~~~~------~~~~~~ 280 (446)
.+|..+|.+++. .+++++++||+.+||+..... .. ..+.+.. ......
T Consensus 147 ~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 226 (328)
T TIGR01179 147 RSKLMSERILRDLSKADPGLSYVILRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVR 226 (328)
T ss_pred HHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEE
Confidence 999999988763 689999999999999843110 00 0000100 112234
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+||++|+|++++.++.... ...+++||++++...++.++.+.+.+++|....
T Consensus 227 ~~v~~~D~a~~~~~~~~~~~~~~~~~~~n~~~~~~~s~~ei~~~~~~~~g~~~~ 280 (328)
T TIGR01179 227 DYIHVMDLADAHLAALEYLLNGGESHVYNLGYGQGFSVLEVIEAFKKVSGVDFP 280 (328)
T ss_pred eeeeHHHHHHHHHHHHhhhhcCCCcceEEcCCCCcccHHHHHHHHHHHhCCCcc
Confidence 68999999999999997531 135789999999999999999999999987543
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.1e-26 Score=228.18 Aligned_cols=217 Identities=20% Similarity=0.161 Sum_probs=157.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+|+||++|++.|.++|++|+.+.|.. .|+.|.+.+.+.
T Consensus 1 MriLI~GasG~lG~~l~~~l~~~~~~v~~~~r~~----------------------------------~dl~d~~~~~~~ 46 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALKERGYEVIATSRSD----------------------------------LDLTDPEAVAKL 46 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTTSEEEEEESTTC----------------------------------S-TTSHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHhhCCCEEEEeCchh----------------------------------cCCCCHHHHHHH
Confidence 6899999999999999999999999999997762 899999999998
Q ss_pred hc--CCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccC-----CCCchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK-----FGFPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~-----~~~~~~~~~~~~~Y 231 (446)
+. ..|+||||||....+ ..+++..+++|+.++.+|+++|.+.+. ++||+||..+.. +..+++..+|.+.|
T Consensus 47 ~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~~~-~li~~STd~VFdG~~~~~y~E~d~~~P~~~Y 125 (286)
T PF04321_consen 47 LEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKERGA-RLIHISTDYVFDGDKGGPYTEDDPPNPLNVY 125 (286)
T ss_dssp HHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHCT--EEEEEEEGGGS-SSTSSSB-TTS----SSHH
T ss_pred HHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHcCC-cEEEeeccEEEcCCcccccccCCCCCCCCHH
Confidence 85 479999999875432 345667789999999999999999997 999999987632 23456677899999
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcc-cccc------cceeecccCcccCCccCHHHHHHHHHHHHhCCC--CC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDA-YKET------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS--LS 302 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~-~~~~------~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~--~~ 302 (446)
|++|+.+|+.+++..-++.|+|++++||+... +... ..-.+......++.+++++|+|+++..++++.. ..
T Consensus 126 G~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~~~~~~~~~~~~~i~~~~d~~~~p~~~~dlA~~i~~l~~~~~~~~~ 205 (286)
T PF04321_consen 126 GRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFLRWLLRRLRQGEPIKLFDDQYRSPTYVDDLARVILELIEKNLSGAS 205 (286)
T ss_dssp HHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHHHHHHHHHHCTSEEEEESSCEE--EEHHHHHHHHHHHHHHHHH-GG
T ss_pred HHHHHHHHHHHHHhcCCEEEEecceecccCCCchhhhHHHHHhcCCeeEeeCCceeCCEEHHHHHHHHHHHHHhcccccc
Confidence 99999999999986669999999999999432 2111 011111223445678999999999999998754 12
Q ss_pred CCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 303 YCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 303 ~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
..++||+++++.++..++++.+.+.++...
T Consensus 206 ~~Giyh~~~~~~~S~~e~~~~i~~~~~~~~ 235 (286)
T PF04321_consen 206 PWGIYHLSGPERVSRYEFAEAIAKILGLDP 235 (286)
T ss_dssp G-EEEE---BS-EEHHHHHHHHHHHHTHCT
T ss_pred cceeEEEecCcccCHHHHHHHHHHHhCCCC
Confidence 468999999999999999999999999887
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.9e-25 Score=199.48 Aligned_cols=180 Identities=33% Similarity=0.361 Sum_probs=147.9
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|+|+||||++|++++++|+++|++|++++|++++... ..+++++.+|+.|.+++.+++.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---------------------~~~~~~~~~d~~d~~~~~~al~ 59 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---------------------SPGVEIIQGDLFDPDSVKAALK 59 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---------------------CTTEEEEESCTTCHHHHHHHHT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---------------------ccccccceeeehhhhhhhhhhh
Confidence 7999999999999999999999999999999987664 1789999999999999999999
Q ss_pred CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch---hhhchhhHHHHHHHHHH
Q 013273 163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAE 239 (446)
Q Consensus 163 ~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~---~~~~~~~~Y~~sK~~~E 239 (446)
++|+|||++|.... +...+.++++++++++++|||++|+.+++...... .....+..|...|..+|
T Consensus 60 ~~d~vi~~~~~~~~-----------~~~~~~~~~~a~~~~~~~~~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e 128 (183)
T PF13460_consen 60 GADAVIHAAGPPPK-----------DVDAAKNIIEAAKKAGVKRVVYLSSAGVYRDPPGLFSDEDKPIFPEYARDKREAE 128 (183)
T ss_dssp TSSEEEECCHSTTT-----------HHHHHHHHHHHHHHTTSSEEEEEEETTGTTTCTSEEEGGTCGGGHHHHHHHHHHH
T ss_pred hcchhhhhhhhhcc-----------cccccccccccccccccccceeeeccccCCCCCcccccccccchhhhHHHHHHHH
Confidence 99999999986443 27789999999999999999999999885532221 11222356899999999
Q ss_pred HHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 240 EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 240 ~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
+.+++.+++|++|||+++||+... ...+ +........++||++|+|++|+.+++|
T Consensus 129 ~~~~~~~~~~~ivrp~~~~~~~~~---~~~~-~~~~~~~~~~~i~~~DvA~~~~~~l~~ 183 (183)
T PF13460_consen 129 EALRESGLNWTIVRPGWIYGNPSR---SYRL-IKEGGPQGVNFISREDVAKAIVEALEN 183 (183)
T ss_dssp HHHHHSTSEEEEEEESEEEBTTSS---SEEE-ESSTSTTSHCEEEHHHHHHHHHHHHH-
T ss_pred HHHHhcCCCEEEEECcEeEeCCCc---ceeE-EeccCCCCcCcCCHHHHHHHHHHHhCC
Confidence 999999999999999999998632 1122 211333444789999999999999875
|
... |
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.2e-25 Score=232.00 Aligned_cols=255 Identities=14% Similarity=0.057 Sum_probs=176.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHH---HHHHHHHHhhhcc-cccccC----CCCCCceEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAE---NLVQSVKQMKLDG-ELANKG----IQPVEMLEL 146 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~---~l~~~~~~~~l~~-~~~~~g----~~~~~~v~~ 146 (446)
..+++|||||||||||++|++.|++.+ .+|+++.|...... .+..++....+.. .....+ .+...++++
T Consensus 9 ~~~k~VlvTGaTGFlG~~ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~ 88 (491)
T PLN02996 9 LENKTILVTGATGFLAKIFVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTP 88 (491)
T ss_pred hCCCeEEEeCCCcHHHHHHHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEE
Confidence 467899999999999999999999864 47899999764221 1111111100000 000000 011268999
Q ss_pred EEcCCC-------ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCC
Q 013273 147 VECDLE-------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 147 v~~Dl~-------d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~ 218 (446)
+.+|++ |.+.++.+++++|+|||+|+.... ..++...+++|+.|+.+++++|++. ++++|||+||..++..
T Consensus 89 i~GDl~~~~LGLs~~~~~~~l~~~vD~ViH~AA~v~~-~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~ 167 (491)
T PLN02996 89 VPGDISYDDLGVKDSNLREEMWKEIDIVVNLAATTNF-DERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGE 167 (491)
T ss_pred EecccCCcCCCCChHHHHHHHHhCCCEEEECccccCC-cCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecC
Confidence 999998 445567788999999999987543 2345567889999999999999986 7889999999876432
Q ss_pred CC----------ch--------h--------------------------------------hhchhhHHHHHHHHHHHHH
Q 013273 219 GF----------PA--------A--------------------------------------ILNLFWGVLLWKRKAEEAL 242 (446)
Q Consensus 219 ~~----------~~--------~--------------------------------------~~~~~~~Y~~sK~~~E~~l 242 (446)
.. +. + .....+.|+.+|+.+|+++
T Consensus 168 ~~~~i~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pn~Y~~TK~~aE~lv 247 (491)
T PLN02996 168 KSGLILEKPFHMGETLNGNRKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHGWPNTYVFTKAMGEMLL 247 (491)
T ss_pred CCceeeeecCCCcccccccccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCCCCCchHhhHHHHHHHH
Confidence 10 00 0 0011245999999999999
Q ss_pred Hh--CCCCEEEEecCCccCCCcccccc-----------------c-ceeecccCcccCCccCHHHHHHHHHHHHhCC--C
Q 013273 243 IA--SGLPYTIVRPGGMERPTDAYKET-----------------H-NITLSQEDTLFGGQVSNLQVAELLACMAKNR--S 300 (446)
Q Consensus 243 ~~--~gl~~tivRPg~v~gp~~~~~~~-----------------~-~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~--~ 300 (446)
++ .|++++|+||++|||++...... . ...+...+.....+||++|++++++.++... .
T Consensus 248 ~~~~~~lpv~i~RP~~V~G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~ 327 (491)
T PLN02996 248 GNFKENLPLVIIRPTMITSTYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGG 327 (491)
T ss_pred HHhcCCCCEEEECCCEeccCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhcc
Confidence 85 58999999999999986422100 0 0011112233457899999999999998753 1
Q ss_pred CCCCcEEEEecC--CCCChhhHHHHHHhccCCCCC
Q 013273 301 LSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 301 ~~~~~v~ni~~~--~~~t~~~i~e~l~~i~~~~~~ 333 (446)
...+++||++++ ...++.++.+++.++++..+.
T Consensus 328 ~~~~~vYNi~s~~~~~~s~~ei~~~~~~~~~~~p~ 362 (491)
T PLN02996 328 QGSEIIYHVGSSLKNPVKFSNLHDFAYRYFSKNPW 362 (491)
T ss_pred CCCCcEEEecCCCCCcccHHHHHHHHHHHhhhCCC
Confidence 124679999988 788999999999999877664
|
|
| >KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.3e-24 Score=208.59 Aligned_cols=248 Identities=17% Similarity=0.124 Sum_probs=191.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++||||||.||||+|.+-+|+++|+.|++++.-.+....-.+.++++..+ ..++.|+++|+.|.+.+++
T Consensus 2 ~~~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~----------~~~v~f~~~Dl~D~~~L~k 71 (343)
T KOG1371|consen 2 GKHVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGE----------GKSVFFVEGDLNDAEALEK 71 (343)
T ss_pred CcEEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCC----------CCceEEEEeccCCHHHHHH
Confidence 468999999999999999999999999999986444433333334433111 3789999999999999999
Q ss_pred Hhc--CCCEEEEcccC--CCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhc-hhh
Q 013273 160 ALG--NASVVICCIGA--SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILN-LFW 229 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~--~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~-~~~ 229 (446)
+|+ .+|.|+|.|+. .....+++..++..|+.|+.+|++++++++++.+||.||..++... .+.++.. |.+
T Consensus 72 vF~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V~sssatvYG~p~~ip~te~~~t~~p~~ 151 (343)
T KOG1371|consen 72 LFSEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALVFSSSATVYGLPTKVPITEEDPTDQPTN 151 (343)
T ss_pred HHhhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEEEecceeeecCcceeeccCcCCCCCCCC
Confidence 995 58999999983 4567778888999999999999999999999999999999884332 2223344 778
Q ss_pred HHHHHHHHHHHHHHh----CCCCEEEEecCCccC--CCccc-----cccccee-------ecc--------------cCc
Q 013273 230 GVLLWKRKAEEALIA----SGLPYTIVRPGGMER--PTDAY-----KETHNIT-------LSQ--------------EDT 277 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~g--p~~~~-----~~~~~~~-------~~~--------------~~~ 277 (446)
.|+++|..+|+++.. .++.+++||..+++| |.... ....+++ ++. .+.
T Consensus 152 pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~p~~~~nnl~p~v~~vaigr~~~l~v~g~d~~t~dgt 231 (343)
T KOG1371|consen 152 PYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEAPLGIPNNLLPYVFQVAIGRRPNLQVVGRDYTTIDGT 231 (343)
T ss_pred cchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCCCccCcccccccccchhhcccccceeecCcccccCCC
Confidence 899999999999974 568899999999998 43221 1111111 000 112
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhccCCCCCCCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRAEPKES 337 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~~~~ 337 (446)
...+.+|+.|.|+..+.++..... ...++||++.+...+..++...+++..|.......+
T Consensus 232 ~vrdyi~v~Dla~~h~~al~k~~~~~~~~i~Nlgtg~g~~V~~lv~a~~k~~g~~~k~~~v 292 (343)
T KOG1371|consen 232 IVRDYIHVLDLADGHVAALGKLRGAAEFGVYNLGTGKGSSVLELVTAFEKALGVKIKKKVV 292 (343)
T ss_pred eeecceeeEehHHHHHHHhhccccchheeeEeecCCCCccHHHHHHHHHHHhcCCCCcccc
Confidence 334679999999999999987542 345599999999999999999999999988765543
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.93 E-value=2.5e-24 Score=216.69 Aligned_cols=244 Identities=20% Similarity=0.194 Sum_probs=172.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHH---HHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-- 154 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~---~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-- 154 (446)
+|||||||||||++|++.|+++| ++|++++|+.+... .+.+.++...+... .....+++++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~v~~~~~D~~~~~~ 75 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELLRRSTQAKVICLVRAASEEHAMERLREALRSYRLWQE-----DLARERIEVVAGDLSEPRL 75 (367)
T ss_pred CEEEeccchHHHHHHHHHHHhCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCc-----hhhhCCEEEEeCCcCcccC
Confidence 48999999999999999999999 67999999876432 22222222211100 00015799999999864
Q ss_pred ----hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC-----chh--
Q 013273 155 ----VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA-- 223 (446)
Q Consensus 155 ----~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~-----~~~-- 223 (446)
+.+..+..++|+|||||+.... ...+...+++|+.++.+++++|.+.++++||++||.++..... ...
T Consensus 76 gl~~~~~~~~~~~~d~vih~a~~~~~-~~~~~~~~~~nv~g~~~ll~~a~~~~~~~~v~iSS~~v~~~~~~~~~~~~~~~ 154 (367)
T TIGR01746 76 GLSDAEWERLAENVDTIVHNGALVNW-VYPYSELRAANVLGTREVLRLAASGRAKPLHYVSTISVLAAIDLSTVTEDDAI 154 (367)
T ss_pred CcCHHHHHHHHhhCCEEEeCCcEecc-CCcHHHHhhhhhHHHHHHHHHHhhCCCceEEEEccccccCCcCCCCccccccc
Confidence 4567777899999999986532 1233445678999999999999999998999999987743311 000
Q ss_pred ---hhchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCCccc-ccccce------------eecccCcccCCccC
Q 013273 224 ---ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAY-KETHNI------------TLSQEDTLFGGQVS 284 (446)
Q Consensus 224 ---~~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~~~~-~~~~~~------------~~~~~~~~~~~~v~ 284 (446)
...+..+|+.+|+.+|.++++ .|++++++|||++||+.... ...... .+.........+++
T Consensus 155 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 234 (367)
T TIGR01746 155 VTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYTGAINSSDILWRMVKGCLALGAYPDSPELTEDLTP 234 (367)
T ss_pred cccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCCCCCCchhHHHHHHHHHHHhCCCCCCCccccCccc
Confidence 112345799999999998874 59999999999999973210 000000 01111111335899
Q ss_pred HHHHHHHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 285 NLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++|+|++++.++.++.. ..+++||++++...++.++.+++.+ .|...
T Consensus 235 vddva~ai~~~~~~~~~~~~~~~~~v~~~~~~s~~e~~~~i~~-~g~~~ 282 (367)
T TIGR01746 235 VDYVARAIVALSSQPAASAGGPVFHVVNPEPVSLDEFLEWLER-AGYNL 282 (367)
T ss_pred HHHHHHHHHHHHhCCCcccCCceEEecCCCCCCHHHHHHHHHH-cCCCC
Confidence 99999999999987652 1278999999999999999999988 66543
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.7e-25 Score=216.47 Aligned_cols=241 Identities=18% Similarity=0.131 Sum_probs=178.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+.+++||||+||+|+||+++|++++ .+|++++..+.......+.. + +...++.++.+|+.|..
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~------------~-~~~~~v~~~~~D~~~~~ 68 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELT------------G-FRSGRVTVILGDLLDAN 68 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhh------------c-ccCCceeEEecchhhhh
Confidence 456789999999999999999999998 89999998875332221110 0 12478999999999999
Q ss_pred cHHHHhcCCCEEEEcccCC--CCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc------h--hhh
Q 013273 156 QIEPALGNASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------A--AIL 225 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~--~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~------~--~~~ 225 (446)
++.+++.++ .|||||+.. .....+.+..+++|+.||.+++++|++.+++++||+||..+...+.+ + .+.
T Consensus 69 ~i~~a~~~~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~~v~~lIYtSs~~Vvf~g~~~~n~~E~~p~p~ 147 (361)
T KOG1430|consen 69 SISNAFQGA-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKELGVKRLIYTSSAYVVFGGEPIINGDESLPYPL 147 (361)
T ss_pred hhhhhccCc-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHhCCCEEEEecCceEEeCCeecccCCCCCCCcc
Confidence 999999999 888887643 22334578889999999999999999999999999999887544422 1 123
Q ss_pred chhhHHHHHHHHHHHHHHhC----CCCEEEEecCCccCCCcccccccc----------eeecccCcccCCccCHHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALIAS----GLPYTIVRPGGMERPTDAYKETHN----------ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~~----gl~~tivRPg~v~gp~~~~~~~~~----------~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|..+|+++++. ++..++|||..||||++....... ...+. ...+.++++.+-||.+
T Consensus 148 ~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~~~~i~~~~~~g~~~f~~g~-~~~~~~~~~~~Nva~a 226 (361)
T KOG1430|consen 148 KHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRLLPKIVEALKNGGFLFKIGD-GENLNDFTYGENVAWA 226 (361)
T ss_pred ccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccccHHHHHHHHccCceEEeec-cccccceEEechhHHH
Confidence 33457999999999998853 388999999999999876422111 11111 2334456666666666
Q ss_pred HHHHH---h-CCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 292 LACMA---K-NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 292 i~~ll---~-~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+.+. . +.....|++|+|.++..+...++...+.+.+|....
T Consensus 227 hilA~~aL~~~~~~~~Gq~yfI~d~~p~~~~~~~~~l~~~lg~~~~ 272 (361)
T KOG1430|consen 227 HILAARALLDKSPSVNGQFYFITDDTPVRFFDFLSPLVKALGYCLP 272 (361)
T ss_pred HHHHHHHHHhcCCccCceEEEEeCCCcchhhHHHHHHHHhcCCCCC
Confidence 55433 2 344468999999999988666666677777776654
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.93 E-value=1.2e-24 Score=237.95 Aligned_cols=197 Identities=18% Similarity=0.194 Sum_probs=159.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+||||+||||+++++.|+++|++|++++|+..... ..++.++.+|+.|.+++.++
T Consensus 1 MkILVTGATGfIGs~La~~Ll~~G~~Vv~l~R~~~~~~----------------------~~~v~~v~gDL~D~~~l~~a 58 (854)
T PRK05865 1 MRIAVTGASGVLGRGLTARLLSQGHEVVGIARHRPDSW----------------------PSSADFIAADIRDATAVESA 58 (854)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCchhhc----------------------ccCceEEEeeCCCHHHHHHH
Confidence 47999999999999999999999999999999753210 03588999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
++++|+|||||+.... .+++|+.++.+++++|++.++++||++||.. |..+|+
T Consensus 59 l~~vD~VVHlAa~~~~-------~~~vNv~GT~nLLeAa~~~gvkr~V~iSS~~--------------------K~aaE~ 111 (854)
T PRK05865 59 MTGADVVAHCAWVRGR-------NDHINIDGTANVLKAMAETGTGRIVFTSSGH--------------------QPRVEQ 111 (854)
T ss_pred HhCCCEEEECCCcccc-------hHHHHHHHHHHHHHHHHHcCCCeEEEECCcH--------------------HHHHHH
Confidence 9999999999975321 4688999999999999999999999999842 889999
Q ss_pred HHHhCCCCEEEEecCCccCCCcc-cccc-cce-eec-ccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 013273 241 ALIASGLPYTIVRPGGMERPTDA-YKET-HNI-TLS-QEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~gp~~~-~~~~-~~~-~~~-~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t 316 (446)
+++++|++++++||+++|||+.. +... ... ... .......++||++|+|++++.++++.. ..+++|||+++...+
T Consensus 112 ll~~~gl~~vILRp~~VYGP~~~~~i~~ll~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~-~~ggvyNIgsg~~~S 190 (854)
T PRK05865 112 MLADCGLEWVAVRCALIFGRNVDNWVQRLFALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV-IDSGPVNLAAPGELT 190 (854)
T ss_pred HHHHcCCCEEEEEeceEeCCChHHHHHHHhcCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC-cCCCeEEEECCCccc
Confidence 99999999999999999999632 1111 001 111 111222368999999999999987553 347899999999999
Q ss_pred hhhHHHHHHhc
Q 013273 317 LTPMEELLAKI 327 (446)
Q Consensus 317 ~~~i~e~l~~i 327 (446)
+.++.+.+.+.
T Consensus 191 i~EIae~l~~~ 201 (854)
T PRK05865 191 FRRIAAALGRP 201 (854)
T ss_pred HHHHHHHHhhh
Confidence 99999998764
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.92 E-value=3.7e-24 Score=209.68 Aligned_cols=205 Identities=17% Similarity=0.121 Sum_probs=159.3
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
+||||||||+||++++++|+++|++|++++|++++... .+++.+.+|+.|.+++.+++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~~----------------------~~~~~~~~d~~d~~~l~~a~ 58 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSAG----------------------PNEKHVKFDWLDEDTWDNPF 58 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCccccC----------------------CCCccccccCCCHHHHHHHH
Confidence 48999999999999999999999999999999864321 45777889999999999998
Q ss_pred ------cC-CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 162 ------GN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 162 ------~~-~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
.+ +|.|+|+++.... ......+++++|+++|++|||++||.+....+ ..
T Consensus 59 ~~~~~~~g~~d~v~~~~~~~~~-----------~~~~~~~~i~aa~~~gv~~~V~~Ss~~~~~~~-------------~~ 114 (285)
T TIGR03649 59 SSDDGMEPEISAVYLVAPPIPD-----------LAPPMIKFIDFARSKGVRRFVLLSASIIEKGG-------------PA 114 (285)
T ss_pred hcccCcCCceeEEEEeCCCCCC-----------hhHHHHHHHHHHHHcCCCEEEEeeccccCCCC-------------ch
Confidence 67 9999999864221 13456789999999999999999997653221 12
Q ss_pred HHHHHHHHHhC-CCCEEEEecCCccCCCccc--c----cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEE
Q 013273 235 KRKAEEALIAS-GLPYTIVRPGGMERPTDAY--K----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 235 K~~~E~~l~~~-gl~~tivRPg~v~gp~~~~--~----~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
+...|+++++. |++++++||+++|++.... . ....+... .......+|+++|+|++++.++.++. ..+++|
T Consensus 115 ~~~~~~~l~~~~gi~~tilRp~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~v~~~Dva~~~~~~l~~~~-~~~~~~ 192 (285)
T TIGR03649 115 MGQVHAHLDSLGGVEYTVLRPTWFMENFSEEFHVEAIRKENKIYSA-TGDGKIPFVSADDIARVAYRALTDKV-APNTDY 192 (285)
T ss_pred HHHHHHHHHhccCCCEEEEeccHHhhhhcccccccccccCCeEEec-CCCCccCcccHHHHHHHHHHHhcCCC-cCCCeE
Confidence 34567778775 9999999999998653111 0 11112211 22334478999999999999999865 457899
Q ss_pred EEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 308 EVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 308 ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
+++++...+..++.+++++++|+....
T Consensus 193 ~l~g~~~~s~~eia~~l~~~~g~~v~~ 219 (285)
T TIGR03649 193 VVLGPELLTYDDVAEILSRVLGRKITH 219 (285)
T ss_pred EeeCCccCCHHHHHHHHHHHhCCceEE
Confidence 999999999999999999999987554
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis] | Back alignment and domain information |
|---|
Probab=99.92 E-value=6.1e-24 Score=199.41 Aligned_cols=233 Identities=14% Similarity=0.096 Sum_probs=183.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
...++|+||||.||||+|||+.|..+||+|++++--........ ..+...++++.+..|+..
T Consensus 25 ~~~lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~--------------~~~~~~~~fel~~hdv~~---- 86 (350)
T KOG1429|consen 25 SQNLRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENL--------------EHWIGHPNFELIRHDVVE---- 86 (350)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhc--------------chhccCcceeEEEeechh----
Confidence 34579999999999999999999999999999987544322211 233445788888888854
Q ss_pred HHHhcCCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch----------hhh
Q 013273 158 EPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA----------AIL 225 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~----------~~~ 225 (446)
+++..+|.|+|+|+... .....+......|+.++.+++-.|++.+ +||++.||..++...... .+.
T Consensus 87 -pl~~evD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv~-aR~l~aSTseVYgdp~~hpq~e~ywg~vnpi 164 (350)
T KOG1429|consen 87 -PLLKEVDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRVG-ARFLLASTSEVYGDPLVHPQVETYWGNVNPI 164 (350)
T ss_pred -HHHHHhhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHhC-ceEEEeecccccCCcccCCCccccccccCcC
Confidence 47888999999998532 3445667778899999999999999988 599999998883321110 235
Q ss_pred chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-------------cccceeecccCcccCCccCHHHH
Q 013273 226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------ETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-------------~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.+...|...|+.+|.++. +.|+.+.|.|+.+.|||.+.+. .+..+.+...+..-..|.++.|+
T Consensus 165 gpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm~~~dgrvvsnf~~q~lr~epltv~g~G~qtRSF~yvsD~ 244 (350)
T KOG1429|consen 165 GPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRMHMDDGRVVSNFIAQALRGEPLTVYGDGKQTRSFQYVSDL 244 (350)
T ss_pred CchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCccccCCChhhHHHHHHHhcCCCeEEEcCCcceEEEEeHHHH
Confidence 567789999999999986 4789999999999999986653 23344445555556679999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.++++.|++++. .+-+||+++...|+.+++|++.++.+....
T Consensus 245 Vegll~Lm~s~~---~~pvNiGnp~e~Tm~elAemv~~~~~~~s~ 286 (350)
T KOG1429|consen 245 VEGLLRLMESDY---RGPVNIGNPGEFTMLELAEMVKELIGPVSE 286 (350)
T ss_pred HHHHHHHhcCCC---cCCcccCCccceeHHHHHHHHHHHcCCCcc
Confidence 999999999986 455999999999999999999999855443
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.91 E-value=1.4e-23 Score=207.36 Aligned_cols=211 Identities=12% Similarity=0.005 Sum_probs=150.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
..|+||||||+||||++|+++|+++|++|++..+ |+.|.+.+.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g~~V~~~~~-------------------------------------~~~~~~~v~ 50 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQGIDFHYGSG-------------------------------------RLENRASLE 50 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCCCEEEEecC-------------------------------------ccCCHHHHH
Confidence 3478999999999999999999999999875432 233334444
Q ss_pred HHhc--CCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----------C
Q 013273 159 PALG--NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----------F 220 (446)
Q Consensus 159 ~a~~--~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----------~ 220 (446)
..+. ++|+|||+||.... ...++...+++|+.++.+|+++|++.+++ +|++||..++.++ .
T Consensus 51 ~~l~~~~~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~ 129 (298)
T PLN02778 51 ADIDAVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRERGLV-LTNYATGCIFEYDDAHPLGSGIGFK 129 (298)
T ss_pred HHHHhcCCCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCC-EEEEecceEeCCCCCCCcccCCCCC
Confidence 4443 68999999996532 12345566889999999999999999985 5556665443221 1
Q ss_pred chh-hhchhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccc-cceeecccC--cccCCccCHHHHHHHHHHHH
Q 013273 221 PAA-ILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET-HNITLSQED--TLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 221 ~~~-~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~-~~~~~~~~~--~~~~~~v~~~DvA~ai~~ll 296 (446)
+++ +..+.+.|+.+|+.+|.+++.+. +..++|++++++.+...... ....+.... ...+.++|++|++++++.++
T Consensus 130 Ee~~p~~~~s~Yg~sK~~~E~~~~~y~-~~~~lr~~~~~~~~~~~~~~fi~~~~~~~~~~~~~~s~~yv~D~v~al~~~l 208 (298)
T PLN02778 130 EEDTPNFTGSFYSKTKAMVEELLKNYE-NVCTLRVRMPISSDLSNPRNFITKITRYEKVVNIPNSMTILDELLPISIEMA 208 (298)
T ss_pred cCCCCCCCCCchHHHHHHHHHHHHHhh-ccEEeeecccCCcccccHHHHHHHHHcCCCeeEcCCCCEEHHHHHHHHHHHH
Confidence 222 22344789999999999998754 57789998888764221100 001111111 11235899999999999999
Q ss_pred hCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 297 ~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++.. +++||++++..+++.++.+++.++++..
T Consensus 209 ~~~~---~g~yNigs~~~iS~~el~~~i~~~~~~~ 240 (298)
T PLN02778 209 KRNL---TGIYNFTNPGVVSHNEILEMYRDYIDPS 240 (298)
T ss_pred hCCC---CCeEEeCCCCcccHHHHHHHHHHHhCCC
Confidence 7643 4699999999999999999999999854
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.91 E-value=8.5e-23 Score=195.45 Aligned_cols=222 Identities=18% Similarity=0.164 Sum_probs=159.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++++||||+||||+++++.|+++|++|++++|+.+ ..+.+...++.. + .++.++.+|++|.++
T Consensus 4 ~~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 70 (248)
T PRK07806 4 LPGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAA---------G----GRASAVGADLTDEES 70 (248)
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhc---------C----CceEEEEcCCCCHHH
Confidence 45679999999999999999999999999999999764 334443333221 1 468899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhch
Q 013273 157 IEPALG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNL 227 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~ 227 (446)
+.++++ ++|+||||||.......++...+++|+.++.++++++.+. ..++||++||......... .....
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~~~~-~~~~~ 149 (248)
T PRK07806 71 VAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSHQAHFIPTV-KTMPE 149 (248)
T ss_pred HHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCchhhcCccc-cCCcc
Confidence 877763 6899999998654334456677899999999999999864 2358999999654221110 01122
Q ss_pred hhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc--cceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 228 FWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~--~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
...|+.+|..+|.+++. .|+++++|+||.+.++....... ..-.........+.+++++|+|++++.++++
T Consensus 150 ~~~Y~~sK~a~e~~~~~l~~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~ 229 (248)
T PRK07806 150 YEPVARSKRAGEDALRALRPELAEKGIGFVVVSGDMIEGTVTATLLNRLNPGAIEARREAAGKLYTVSEFAAEVARAVTA 229 (248)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhccCeEEEEeCCccccCchhhhhhccCCHHHHHHHHhhhcccCCHHHHHHHHHHHhhc
Confidence 45799999999988763 68999999999887763110000 0000001111234689999999999999996
Q ss_pred CCCCCCcEEEEecCCC
Q 013273 299 RSLSYCKVVEVIAETT 314 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~~ 314 (446)
.. ..+++|++.++..
T Consensus 230 ~~-~~g~~~~i~~~~~ 244 (248)
T PRK07806 230 PV-PSGHIEYVGGADY 244 (248)
T ss_pred cc-cCccEEEecCccc
Confidence 64 5789999998864
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=204.26 Aligned_cols=223 Identities=19% Similarity=0.113 Sum_probs=153.9
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|||||||||||+++++.|+++|++|++++|+..+...+ .... ..|+.+ ..+.+.+.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---------------------~~~~--~~~~~~-~~~~~~~~ 56 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANT---------------------KWEG--YKPWAP-LAESEALE 56 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCcc---------------------ccee--eecccc-cchhhhcC
Confidence 68999999999999999999999999999987653211 0001 123322 44567788
Q ss_pred CCCEEEEcccCCCCc-cC---CCCCcccchHHHHHHHHHHHHhCCCC--EEEEEccccccCCC-----CchhhhchhhHH
Q 013273 163 NASVVICCIGASEKE-VF---DITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 163 ~~D~VI~~Ag~~~~~-~~---~~~~~~~vNv~g~~~l~~aa~~~~v~--r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
++|+|||+||..... .+ .....+++|+.++.+++++|++++++ +||+.|+.+++... .++....+...|
T Consensus 57 ~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~~~~~~~~ 136 (292)
T TIGR01777 57 GADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAAAEQKPKVFISASAVGYYGTSEDRVFTEEDSPAGDDFL 136 (292)
T ss_pred CCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHhcCCCceEEEEeeeEEEeCCCCCCCcCcccCCCCCChH
Confidence 999999999864321 11 12345678999999999999999874 56666665442211 122212233335
Q ss_pred HHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccc--eee-----cccCcccCCccCHHHHHHHHHHHHhCCCC
Q 013273 232 LLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHN--ITL-----SQEDTLFGGQVSNLQVAELLACMAKNRSL 301 (446)
Q Consensus 232 ~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~--~~~-----~~~~~~~~~~v~~~DvA~ai~~ll~~~~~ 301 (446)
...+...|..+. +.+++++++||+++||+++....... +.. ........++||++|+|++++.+++++.
T Consensus 137 ~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~- 215 (292)
T TIGR01777 137 AELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKGGALAKMLPPFRLGLGGPLGSGRQWFSWIHIEDLVQLILFALENAS- 215 (292)
T ss_pred HHHHHHHHHHhhhchhcCCceEEEeeeeEECCCcchhHHHHHHHhcCcccccCCCCcccccEeHHHHHHHHHHHhcCcc-
Confidence 555656665543 46899999999999999653211000 000 1122334578999999999999998764
Q ss_pred CCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 302 SYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 302 ~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
..++||++++...++.++.+.+.+.++..
T Consensus 216 -~~g~~~~~~~~~~s~~di~~~i~~~~g~~ 244 (292)
T TIGR01777 216 -ISGPVNATAPEPVRNKEFAKALARALHRP 244 (292)
T ss_pred -cCCceEecCCCccCHHHHHHHHHHHhCCC
Confidence 35799999999999999999999999864
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.8e-23 Score=201.90 Aligned_cols=226 Identities=17% Similarity=0.178 Sum_probs=163.0
Q ss_pred EEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceE----EEEcCCCChhcH
Q 013273 83 AFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE----LVECDLEKRVQI 157 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~----~v~~Dl~d~~~~ 157 (446)
||||||+|.||+.||++|++.+ .+|++++|++.+...+.+++... ....++. .+.+|++|.+.+
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~-----------~~~~~v~~~~~~vigDvrd~~~l 69 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSR-----------FPDPKVRFEIVPVIGDVRDKERL 69 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHH-----------C--TTCEEEEE--CTSCCHHHHH
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhc-----------ccccCcccccCceeecccCHHHH
Confidence 7999999999999999999998 68999999999999888776432 0113444 458999999999
Q ss_pred HHHhc--CCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHH
Q 013273 158 EPALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL 233 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~ 233 (446)
..+|+ +.|+|||.|+.-. -....+....++|+.|+.|++++|.++++++||++||.-+ .+|.+.||+
T Consensus 70 ~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~~v~~~v~ISTDKA---------v~PtnvmGa 140 (293)
T PF02719_consen 70 NRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEHGVERFVFISTDKA---------VNPTNVMGA 140 (293)
T ss_dssp HHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHTT-SEEEEEEECGC---------SS--SHHHH
T ss_pred HHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEcccccc---------CCCCcHHHH
Confidence 99998 8999999998532 2334566778999999999999999999999999999754 256678999
Q ss_pred HHHHHHHHHHh-------CCCCEEEEecCCccCCCccc--------ccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 234 WKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY--------KETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 234 sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~--------~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
+|+.+|+++.. .+.++++||.|+|.|..+.. .....+.+.. ..+..=+++++|.++.++.++..
T Consensus 141 tKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~GSVip~F~~Qi~~g~PlTvT~-p~mtRffmti~EAv~Lvl~a~~~ 219 (293)
T PF02719_consen 141 TKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSRGSVIPLFKKQIKNGGPLTVTD-PDMTRFFMTIEEAVQLVLQAAAL 219 (293)
T ss_dssp HHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGTTSCHHHHHHHHHTTSSEEECE-TT-EEEEE-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCCCcHHHHHHHHHHcCCcceeCC-CCcEEEEecHHHHHHHHHHHHhh
Confidence 99999999874 24689999999999975432 1122222222 12222369999999999999876
Q ss_pred CCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
.. .|++|-+--+..+.+.++++.+-++.|..
T Consensus 220 ~~--~geifvl~mg~~v~I~dlA~~~i~~~g~~ 250 (293)
T PF02719_consen 220 AK--GGEIFVLDMGEPVKILDLAEAMIELSGLE 250 (293)
T ss_dssp ----TTEEEEE---TCEECCCHHHHHHHHTT-E
T ss_pred CC--CCcEEEecCCCCcCHHHHHHHHHhhcccc
Confidence 53 48898888878899999999999999854
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.4e-22 Score=193.69 Aligned_cols=219 Identities=16% Similarity=0.135 Sum_probs=160.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+... + .++.++.+|+.|.++
T Consensus 3 ~~~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~ 69 (251)
T PRK12826 3 DLEGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAA---------G----GKARARQVDVRDRAA 69 (251)
T ss_pred CCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHH
Confidence 345679999999999999999999999999999999987666555444321 1 458999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++. .+|+||||+|.... ...++...+++|+.++.++++++. +.+.++||++||......+
T Consensus 70 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~ss~~~~~~~ 149 (251)
T PRK12826 70 LKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALIRAGGGRIVLTSSVAGPRVG 149 (251)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechHhhccC
Confidence 888774 68999999986432 122334557889999999998874 4567899999998764111
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-eeecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|..+|.+++ ..|++++++|||+++|+......... .........++.+++++|+|++
T Consensus 150 -----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 224 (251)
T PRK12826 150 -----YPGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMAGNLGDAQWAEAIAAAIPLGRLGEPEDIAAA 224 (251)
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchhhhcCchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 2334579999998887765 25899999999999998543211111 0011112223467999999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.++.+.. ...+++|++.++.
T Consensus 225 ~~~l~~~~~~~~~g~~~~~~~g~ 247 (251)
T PRK12826 225 VLFLASDEARYITGQTLPVDGGA 247 (251)
T ss_pred HHHHhCccccCcCCcEEEECCCc
Confidence 999887643 2368999998764
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-23 Score=220.29 Aligned_cols=199 Identities=18% Similarity=0.180 Sum_probs=151.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+||||++|+++|+++|++|++++|...... ..+++++.+|+.|.. +.++
T Consensus 1 MkILVTGAaGFIGs~La~~Ll~~G~~Vi~ldr~~~~~~----------------------~~~ve~v~~Dl~d~~-l~~a 57 (699)
T PRK12320 1 MQILVTDATGAVGRSVTRQLIAAGHTVSGIAQHPHDAL----------------------DPRVDYVCASLRNPV-LQEL 57 (699)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEeCChhhcc----------------------cCCceEEEccCCCHH-HHHH
Confidence 47999999999999999999999999999998753210 146899999999985 7888
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
+.++|+|||+|+.... ....+|+.++.|++++|++.|+ +|||+||... .+. .|. .+|.
T Consensus 58 l~~~D~VIHLAa~~~~------~~~~vNv~Gt~nLleAA~~~Gv-RiV~~SS~~G----~~~-------~~~----~aE~ 115 (699)
T PRK12320 58 AGEADAVIHLAPVDTS------APGGVGITGLAHVANAAARAGA-RLLFVSQAAG----RPE-------LYR----QAET 115 (699)
T ss_pred hcCCCEEEEcCccCcc------chhhHHHHHHHHHHHHHHHcCC-eEEEEECCCC----CCc-------ccc----HHHH
Confidence 8999999999985321 1235799999999999999998 7999998632 110 122 5788
Q ss_pred HHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCC---ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCCh
Q 013273 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG---QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPL 317 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~---~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~ 317 (446)
++..++++++++|++++||++..+.....+.........+. .+|++|++++++.+++.+. +++|||+++...++
T Consensus 116 ll~~~~~p~~ILR~~nVYGp~~~~~~~r~I~~~l~~~~~~~pI~vIyVdDvv~alv~al~~~~---~GiyNIG~~~~~Si 192 (699)
T PRK12320 116 LVSTGWAPSLVIRIAPPVGRQLDWMVCRTVATLLRSKVSARPIRVLHLDDLVRFLVLALNTDR---NGVVDLATPDTTNV 192 (699)
T ss_pred HHHhcCCCEEEEeCceecCCCCcccHhHHHHHHHHHHHcCCceEEEEHHHHHHHHHHHHhCCC---CCEEEEeCCCeeEH
Confidence 88888899999999999999643211111100000111122 3699999999999997643 45999999999999
Q ss_pred hhHHHHHHhc
Q 013273 318 TPMEELLAKI 327 (446)
Q Consensus 318 ~~i~e~l~~i 327 (446)
.++.+++...
T Consensus 193 ~el~~~i~~~ 202 (699)
T PRK12320 193 VTAWRLLRSV 202 (699)
T ss_pred HHHHHHHHHh
Confidence 9988888776
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.6e-23 Score=196.38 Aligned_cols=217 Identities=15% Similarity=0.102 Sum_probs=157.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|++++..++.+.+++. + .++.++++|++|.+.+
T Consensus 5 ~~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 71 (262)
T PRK13394 5 LNGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKA---------G----GKAIGVAMDVTNEDAV 71 (262)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhc---------C----ceEEEEECCCCCHHHH
Confidence 34689999999999999999999999999999999988777766655432 1 4688899999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHH----HHHHHHHH-HhCCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQA----TKNLVDAA-TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g----~~~l~~aa-~~~~v~r~V~vSS~~~~~~~ 219 (446)
++++. .+|+||||+|.... ...+++..+++|+.+ +.++++.+ ++.+.++||++||......
T Consensus 72 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~~~iv~~ss~~~~~~- 150 (262)
T PRK13394 72 NAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDDRGGVVIYMGSVHSHEA- 150 (262)
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhcCCcEEEEEcchhhcCC-
Confidence 87763 48999999996422 122234557789999 55566666 6667889999999755321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-c----ccee-------ecccCcccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-T----HNIT-------LSQEDTLFG 280 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~----~~~~-------~~~~~~~~~ 280 (446)
......|+.+|...+.+++ ..++++++||||+++++...... . .... +.......+
T Consensus 151 -----~~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (262)
T PRK13394 151 -----SPLKSAYVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKKVMLGKTVDG 225 (262)
T ss_pred -----CCCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHHHHhcCCCCC
Confidence 1234569999998887765 26899999999999998521110 0 0000 001122235
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++++|+|++++.++.... ...+++|++.++.
T Consensus 226 ~~~~~~dva~a~~~l~~~~~~~~~g~~~~~~~g~ 259 (262)
T PRK13394 226 VFTTVEDVAQTVLFLSSFPSAALTGQSFVVSHGW 259 (262)
T ss_pred CCCCHHHHHHHHHHHcCccccCCcCCEEeeCCce
Confidence 68999999999999998653 2347888887763
|
|
| >KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.6e-23 Score=195.30 Aligned_cols=235 Identities=14% Similarity=0.140 Sum_probs=181.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcC---chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~---~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++++||||+||||++.++.++.. .++.+.++.= .+ +..+. ...+.++..|+++|+.|..
T Consensus 7 ~~vlItgg~gfi~Sn~~~~~~~~~p~~~~v~idkL~~~s~-~~~l~---------------~~~n~p~ykfv~~di~~~~ 70 (331)
T KOG0747|consen 7 KNVLITGGAGFIGSNFINYLVDKYPDYKFVNLDKLDYCSN-LKNLE---------------PVRNSPNYKFVEGDIADAD 70 (331)
T ss_pred ceEEEecCcCcchhhhhhhcccCCCCCcEEEEeecccccc-cchhh---------------hhccCCCceEeeccccchH
Confidence 68999999999999999999986 4666655541 11 22221 1234589999999999988
Q ss_pred cHHHHh--cCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCC------chhh
Q 013273 156 QIEPAL--GNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF------PAAI 224 (446)
Q Consensus 156 ~~~~a~--~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~------~~~~ 224 (446)
.+..++ ..+|.|||.|+.... .-.+.......|+.++..|+++++.. ++++|||+||..|++... +...
T Consensus 71 ~~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhvSTdeVYGds~~~~~~~E~s~ 150 (331)
T KOG0747|consen 71 LVLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHVSTDEVYGDSDEDAVVGEASL 150 (331)
T ss_pred HHHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEecccceecCcccccccccccc
Confidence 888777 468999999985432 23344455677999999999999988 789999999988744321 3355
Q ss_pred hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-----------ccceeecccCcccCCccCHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
.+|.+.|+++|+++|..++ ++|++++++|-++||||++.... ...+.+...+.....++|++|++
T Consensus 151 ~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q~~~klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ 230 (331)
T KOG0747|consen 151 LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQYPEKLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVS 230 (331)
T ss_pred CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCcChHHHhHHHHHHHHhCCCcceecCcccceeeEeHHHHH
Confidence 7888999999999999987 47999999999999999764311 12222333344456799999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+++-.+++.. +.|+||||+........++++.+.++++.+..
T Consensus 231 ea~~~v~~Kg--~~geIYNIgtd~e~~~~~l~k~i~eli~~~~~ 272 (331)
T KOG0747|consen 231 EAFKAVLEKG--ELGEIYNIGTDDEMRVIDLAKDICELFEKRLP 272 (331)
T ss_pred HHHHHHHhcC--CccceeeccCcchhhHHHHHHHHHHHHHHhcc
Confidence 9999999884 46999999999999999999988888877543
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=9.8e-23 Score=198.49 Aligned_cols=215 Identities=18% Similarity=0.164 Sum_probs=153.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++||||||+||||++++++|+++|++|++++|+.+....+.+.. ..++.++.+|++|.+++.+
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~ 65 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARY----------------GDRLWVLQLDVTDSAAVRA 65 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCceEEEEccCCCHHHHHH
Confidence 368999999999999999999999999999999987655443211 1468999999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ .++|+||||||..... ..++...+++|+.++.++++++ ++.+.++||++||.+....
T Consensus 66 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~---- 141 (276)
T PRK06482 66 VVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLRRQGGGRIVQVSSEGGQIA---- 141 (276)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcCcccccC----
Confidence 65 4589999999964321 1223455779999999999997 5567789999999765321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCc---cCCCcccccccce----eec-----ccCcccCCcc
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGM---ERPTDAYKETHNI----TLS-----QEDTLFGGQV 283 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v---~gp~~~~~~~~~~----~~~-----~~~~~~~~~v 283 (446)
......|+.+|+.+|.+++ .+|++++++|||.+ ||++......... ... .....+.-+.
T Consensus 142 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (276)
T PRK06482 142 --YPGFSLYHATKWGIEGFVEAVAQEVAPFGIEFTIVEPGPARTNFGAGLDRGAPLDAYDDTPVGDLRRALADGSFAIPG 219 (276)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCccccCCcccccccCCCccccchhhHHHHHHHhhccCCCCC
Confidence 1245679999999997765 26999999999998 4432211000000 000 0000111246
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChh
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~ 318 (446)
+++|++++++.++.++. .+..||++++....+.
T Consensus 220 d~~~~~~a~~~~~~~~~--~~~~~~~g~~~~~~~~ 252 (276)
T PRK06482 220 DPQKMVQAMIASADQTP--APRRLTLGSDAYASIR 252 (276)
T ss_pred CHHHHHHHHHHHHcCCC--CCeEEecChHHHHHHH
Confidence 89999999999998654 3567999988754333
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=194.72 Aligned_cols=236 Identities=15% Similarity=0.124 Sum_probs=169.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++...+.+.+... + ...++.++.+|+.|.+++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~--~~~~~~~~~~Dl~~~~~~ 73 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEAL---------K--GAGAVRYEPADVTDEDQV 73 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---------c--CCCceEEEEcCCCCHHHH
Confidence 45689999999999999999999999999999999987766655444321 0 114688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++.+ .+.++||++||..+....
T Consensus 74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 153 (276)
T PRK05875 74 ARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRGGGGSFVGISSIAASNTH 153 (276)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhcCCC
Confidence 87764 68999999985321 1222445678899999999887754 344699999998763321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceee--cccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL--SQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~--~~~~~~~~~~v~~~DvA~ 290 (446)
.+...|+.+|+..|.+++. .++++++||||++.++............ .........+++++|+|+
T Consensus 154 ------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 227 (276)
T PRK05875 154 ------RWFGAYGVTKSAVDHLMKLAADELGPSWVRVNSIRPGLIRTDLVAPITESPELSADYRACTPLPRVGEVEDVAN 227 (276)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCccCCccccccccCHHHHHHHHcCCCCCCCcCHHHHHH
Confidence 2346799999999988762 5799999999999876422111000000 001122345678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCC-ChhhHHHHHHhccCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTA-PLTPMEELLAKIPSQ 330 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~-t~~~i~e~l~~i~~~ 330 (446)
++++++.++. ...+++|++.++... ...++.+++..+++.
T Consensus 228 ~~~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~ 269 (276)
T PRK05875 228 LAMFLLSDAASWITGQVINVDGGHMLRRGPDFSSMLEPVFGA 269 (276)
T ss_pred HHHHHcCchhcCcCCCEEEECCCeeccCCccHHHHHHHHhhH
Confidence 9999998754 235889999888664 224777777777654
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.9e-22 Score=187.76 Aligned_cols=201 Identities=19% Similarity=0.183 Sum_probs=153.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|.|+||||+++||.+++++|++.|++|++..|+.++++++..++.+ ..+..+..|++|.+++
T Consensus 4 ~~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~---------------~~~~~~~~DVtD~~~~ 68 (246)
T COG4221 4 LKGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGA---------------GAALALALDVTDRAAV 68 (246)
T ss_pred CCCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhcc---------------CceEEEeeccCCHHHH
Confidence 4558999999999999999999999999999999999999998876532 4688999999999886
Q ss_pred HHHh-------cCCCEEEEcccCC------CCccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~------~~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +.+|++|||||.. ..+..+|+.++++|+.|..++.++.. +++.++||++||.+....+
T Consensus 69 ~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y- 147 (246)
T COG4221 69 EAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPY- 147 (246)
T ss_pred HHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccC-
Confidence 6655 5789999999953 23456788899999999999988874 4566799999998764432
Q ss_pred chhhhchhhHHHHHHHHHHHHH---H----hCCCCEEEEecCCccCCCcccccccceeecccCc--ccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEAL---I----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT--LFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l---~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~--~~~~~v~~~DvA~a 291 (446)
.....|+.+|+.+..+. | ..+++++.|.||.+-+..-....... ....... .....+..+|+|++
T Consensus 148 -----~~~~vY~ATK~aV~~fs~~LR~e~~g~~IRVt~I~PG~v~~~~~s~v~~~g-~~~~~~~~y~~~~~l~p~dIA~~ 221 (246)
T COG4221 148 -----PGGAVYGATKAAVRAFSLGLRQELAGTGIRVTVISPGLVETTEFSTVRFEG-DDERADKVYKGGTALTPEDIAEA 221 (246)
T ss_pred -----CCCccchhhHHHHHHHHHHHHHHhcCCCeeEEEecCceecceecccccCCc-hhhhHHHHhccCCCCCHHHHHHH
Confidence 22346999999887664 3 37899999999999553210000000 0001111 12347999999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
+++++..|.
T Consensus 222 V~~~~~~P~ 230 (246)
T COG4221 222 VLFAATQPQ 230 (246)
T ss_pred HHHHHhCCC
Confidence 999999987
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.6e-22 Score=188.74 Aligned_cols=217 Identities=18% Similarity=0.195 Sum_probs=156.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH-HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||||+||++|++.|+++|++|+++.|+..+. ..+.+.+... ..++.++.+|+.|.++
T Consensus 4 ~~~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~ 70 (249)
T PRK12825 4 LMGRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEAL-------------GRRAQAVQADVTDKAA 70 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc-------------CCceEEEECCcCCHHH
Confidence 3457999999999999999999999999998888776543 2232222211 1568999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+.+++ +++|+||||+|..... ..++...+++|+.+..++++.+ ++.+.++||++||.+....
T Consensus 71 v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~i~~SS~~~~~~- 149 (249)
T PRK12825 71 LEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMRKQRGGRIVNISSVAGLPG- 149 (249)
T ss_pred HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECccccCCC-
Confidence 88776 3679999999954321 2223455788999999998887 4567889999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...|.+++ ..|++++++|||+++++...................+.+++.+|+++++
T Consensus 150 -----~~~~~~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 224 (249)
T PRK12825 150 -----WPGRSNYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKEATIEEAREAKDAETPLGRSGTPEDIARAV 224 (249)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccccccchhHHhhhccCCCCCCcCHHHHHHHH
Confidence 1234579999998876654 3699999999999999853221100000000012344589999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++.+.. ...+++|+|.++.
T Consensus 225 ~~~~~~~~~~~~g~~~~i~~g~ 246 (249)
T PRK12825 225 AFLCSDASDYITGQVIEVTGGV 246 (249)
T ss_pred HHHhCccccCcCCCEEEeCCCE
Confidence 99997653 2468999999874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.5e-22 Score=189.94 Aligned_cols=220 Identities=13% Similarity=0.140 Sum_probs=154.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||||||+||||++++++|+++|++|++++|+. .....+...+... ....+.++.+|++|.++
T Consensus 4 ~~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~ 71 (249)
T PRK09135 4 DSAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNAL------------RPGSAAALQADLLDPDA 71 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh------------cCCceEEEEcCCCCHHH
Confidence 3457899999999999999999999999999999964 3334333332211 11458899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~ 220 (446)
+.++++ ++|+||||||.... ...+++..+++|+.++.++++++... ..++++++++.....
T Consensus 72 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--- 148 (249)
T PRK09135 72 LPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQLRKQRGAIVNITDIHAER--- 148 (249)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHHHhhCCeEEEEEeChhhcC---
Confidence 887774 57999999985322 12234556789999999999999642 234677777644322
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
+..+...|+.+|..+|.+++. .+++++++|||+++|+.+......... ............+++|+|++++
T Consensus 149 ---~~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 225 (249)
T PRK09135 149 ---PLKGYPVYCAAKAALEMLTRSLALELAPEVRVNAVAPGAILWPEDGNSFDEEARQAILARTPLKRIGTPEDIAEAVR 225 (249)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHHHCCCCeEEEEEeccccCccccccCCHHHHHHHHhcCCcCCCcCHHHHHHHHH
Confidence 235567899999999988763 369999999999999964321000000 0001112334567999999998
Q ss_pred HHHhCCCCCCCcEEEEecCCCC
Q 013273 294 CMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
.++.+.....+++||+.++...
T Consensus 226 ~~~~~~~~~~g~~~~i~~g~~~ 247 (249)
T PRK09135 226 FLLADASFITGQILAVDGGRSL 247 (249)
T ss_pred HHcCccccccCcEEEECCCeec
Confidence 7776543357899999988654
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.1e-22 Score=201.82 Aligned_cols=232 Identities=16% Similarity=0.182 Sum_probs=189.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+..+|+||||||+|-||+.+++++++.+ .++++++|++.+...+..++... +...++.++-||+.|.+
T Consensus 247 ~~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~-----------~~~~~~~~~igdVrD~~ 315 (588)
T COG1086 247 MLTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREK-----------FPELKLRFYIGDVRDRD 315 (588)
T ss_pred HcCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhh-----------CCCcceEEEecccccHH
Confidence 4678999999999999999999999998 78999999999988888777653 22478999999999999
Q ss_pred cHHHHhcC--CCEEEEcccCC--CCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHH
Q 013273 156 QIEPALGN--ASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV 231 (446)
Q Consensus 156 ~~~~a~~~--~D~VI~~Ag~~--~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y 231 (446)
.+..++.+ +|+|+|+|+.- .--..++.+.+++|+.||.|++++|.++++++||.+||.-+ .+|.+.|
T Consensus 316 ~~~~~~~~~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~~V~~~V~iSTDKA---------V~PtNvm 386 (588)
T COG1086 316 RVERAMEGHKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKNGVKKFVLISTDKA---------VNPTNVM 386 (588)
T ss_pred HHHHHHhcCCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHhCCCEEEEEecCcc---------cCCchHh
Confidence 99999988 99999999953 33455677788999999999999999999999999999754 3667789
Q ss_pred HHHHHHHHHHHHh-----C--CCCEEEEecCCccCCCcccc--------cccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 232 LLWKRKAEEALIA-----S--GLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 232 ~~sK~~~E~~l~~-----~--gl~~tivRPg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
|.+|+.+|+++.. . +-+++++|.|+|.|..+... ....+.+.. ..+..=|+.+.|.++.++++.
T Consensus 387 GaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrGSViPlFk~QI~~GgplTvTd-p~mtRyfMTI~EAv~LVlqA~ 465 (588)
T COG1086 387 GATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRGSVIPLFKKQIAEGGPLTVTD-PDMTRFFMTIPEAVQLVLQAG 465 (588)
T ss_pred hHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCCCCHHHHHHHHHcCCCccccC-CCceeEEEEHHHHHHHHHHHH
Confidence 9999999999863 2 37899999999999864321 112222211 122223689999999999998
Q ss_pred hCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 297 ~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
... ..|++|=+--|..++..++++.+-++.|..
T Consensus 466 a~~--~gGeifvldMGepvkI~dLAk~mi~l~g~~ 498 (588)
T COG1086 466 AIA--KGGEIFVLDMGEPVKIIDLAKAMIELAGQT 498 (588)
T ss_pred hhc--CCCcEEEEcCCCCeEHHHHHHHHHHHhCCC
Confidence 875 368899888889999999999999999833
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.8e-22 Score=191.59 Aligned_cols=217 Identities=13% Similarity=0.027 Sum_probs=155.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||++++++|+++|++|++++|+.++...+.++++.. ..++.++.+|+.|.+++
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~ 68 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKA-------------GGKAIGVAMDVTDEEAI 68 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence 34679999999999999999999999999999999988777665554431 15789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++. ++|+||||||..... ..+++..+++|+.++.++++.+ ++.+.++||++||......
T Consensus 69 ~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~-- 146 (258)
T PRK12429 69 NAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMKAQGGGRIINMASVHGLVG-- 146 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCeEEEEEcchhhccC--
Confidence 87764 689999999854221 1223345678888866555554 5567889999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c----cccee-------ecccCcccCC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E----THNIT-------LSQEDTLFGG 281 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~----~~~~~-------~~~~~~~~~~ 281 (446)
......|+.+|...+.+.+ ..|++++++|||+++++..... . ..... ........+.
T Consensus 147 ----~~~~~~y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (258)
T PRK12429 147 ----SAGKAAYVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDVLLPLVPQKR 222 (258)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHHHhccCCccc
Confidence 1345679999998886654 2689999999999998743210 0 00000 0001112346
Q ss_pred ccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRSL-SYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~ 313 (446)
+++++|+|+++++++.+... ..+++|++.++-
T Consensus 223 ~~~~~d~a~~~~~l~~~~~~~~~g~~~~~~~g~ 255 (258)
T PRK12429 223 FTTVEEIADYALFLASFAAKGVTGQAWVVDGGW 255 (258)
T ss_pred cCCHHHHHHHHHHHcCccccCccCCeEEeCCCE
Confidence 89999999999999976431 347889887763
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.2e-22 Score=194.99 Aligned_cols=224 Identities=18% Similarity=0.131 Sum_probs=157.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||++++++|+++|++|++++|+.++...+.+.+ ..++.++.+|++|.+++++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~~~ 66 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKY----------------GDRLLPLALDVTDRAAVFA 66 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc----------------cCCeeEEEccCCCHHHHHH
Confidence 468999999999999999999999999999999987665543211 1468889999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ .++|+||||||.... ...++...+++|+.++.++++++ ++.+.++||++||.+.....
T Consensus 67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~~--- 143 (275)
T PRK08263 67 AVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLREQRSGHIIQISSIGGISAF--- 143 (275)
T ss_pred HHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhcCCC---
Confidence 65 467999999996432 12334556889999998888776 45677899999997663321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--ccee-ec------ccCcccCCc-cCH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNIT-LS------QEDTLFGGQ-VSN 285 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~~~~-~~------~~~~~~~~~-v~~ 285 (446)
.....|+.+|+..+.+.+ .+|++++++|||++.++....... .... .. ......+.+ +++
T Consensus 144 ---~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 220 (275)
T PRK08263 144 ---PMSGIYHASKWALEGMSEALAQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAEQWSERSVDGDP 220 (275)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHHHHHhccCCCCH
Confidence 234569999999887654 379999999999998764211000 0000 00 000112345 899
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHh
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK 326 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~ 326 (446)
+|+|++++.+++.+. ..++.|+..+....+..++.+.+.+
T Consensus 221 ~dva~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (275)
T PRK08263 221 EAAAEALLKLVDAEN-PPLRLFLGSGVLDLAKADYERRLAT 260 (275)
T ss_pred HHHHHHHHHHHcCCC-CCeEEEeCchHHHHHHHHHHHHHHH
Confidence 999999999999765 3445554444444455555555554
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.9e-22 Score=190.66 Aligned_cols=218 Identities=15% Similarity=0.110 Sum_probs=159.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||++++++|+++|++|++++|+.++...+.+.++.. | .++.++.+|+.|.+++
T Consensus 8 ~~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~---------~----~~~~~~~~D~~~~~~~ 74 (255)
T PRK07523 8 LTGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQ---------G----LSAHALAFDVTDHDAV 74 (255)
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---------C----ceEEEEEccCCCHHHH
Confidence 45789999999999999999999999999999999987776655544321 1 4688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++. .+|+||||+|..... ..+++..+.+|+.++.++++++.+ .+.++||++||......
T Consensus 75 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~-- 152 (255)
T PRK07523 75 RAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIARGAGKIINIASVQSALA-- 152 (255)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEEccchhccC--
Confidence 88763 589999999964321 222345577999999999998864 35679999999765322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|...|.+++ .+|+++++||||++.++...... .... .........+.+.+++|+|++
T Consensus 153 ----~~~~~~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 228 (255)
T PRK07523 153 ----RPGIAPYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPLNAALVADPEFSAWLEKRTPAGRWGKVEELVGA 228 (255)
T ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCchhhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 1335579999999988765 36899999999999988422110 0000 000112223457889999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++.+.. ...++++++.++..
T Consensus 229 ~~~l~~~~~~~~~G~~i~~~gg~~ 252 (255)
T PRK07523 229 CVFLASDASSFVNGHVLYVDGGIT 252 (255)
T ss_pred HHHHcCchhcCccCcEEEECCCee
Confidence 999997643 23578898877753
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.2e-21 Score=187.25 Aligned_cols=202 Identities=16% Similarity=0.108 Sum_probs=154.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++.+++++|||||++||..+++.|+++|++|+++.|+.+++.++.+++++. . .-.++++.+||+|+++
T Consensus 3 ~~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~--------~----~v~v~vi~~DLs~~~~ 70 (265)
T COG0300 3 PMKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDK--------T----GVEVEVIPADLSDPEA 70 (265)
T ss_pred CCCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHh--------h----CceEEEEECcCCChhH
Confidence 356789999999999999999999999999999999999999999988764 1 1568999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+.++.. .+|++|||||.... ++.+...++++|+.+...|..+.. +.+.++||+++|.++..+.
T Consensus 71 ~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~~~G~IiNI~S~ag~~p~ 150 (265)
T COG0300 71 LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVERGAGHIINIGSAAGLIPT 150 (265)
T ss_pred HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechhhcCCC
Confidence 888762 58999999996533 333345668899999888877764 5677899999998875543
Q ss_pred CchhhhchhhHHHHHHHHHHHH-------HHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~-------l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+++|..+-.+ |+..|+.++.|+||.+...... ....... .......+++.+|+|+.+
T Consensus 151 ------p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~f~~-~~~~~~~---~~~~~~~~~~~~~va~~~ 220 (265)
T COG0300 151 ------PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTEFFD-AKGSDVY---LLSPGELVLSPEDVAEAA 220 (265)
T ss_pred ------cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCcccccccc-ccccccc---cccchhhccCHHHHHHHH
Confidence 3345799999865433 3458999999999999877321 0000000 011122468999999999
Q ss_pred HHHHhCCC
Q 013273 293 ACMAKNRS 300 (446)
Q Consensus 293 ~~ll~~~~ 300 (446)
+..+....
T Consensus 221 ~~~l~~~k 228 (265)
T COG0300 221 LKALEKGK 228 (265)
T ss_pred HHHHhcCC
Confidence 99998765
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.89 E-value=8.4e-22 Score=188.91 Aligned_cols=214 Identities=15% Similarity=0.069 Sum_probs=153.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
+++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+... ..++.++.+|+.|.++++.+
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~~ 68 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDA-------------GGSVIYLVADVTKEDEIADM 68 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCceEEEECCCCCHHHHHHH
Confidence 58999999999999999999999999999999987766655544321 14689999999999866554
Q ss_pred h-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCchh
Q 013273 161 L-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+ .++|+||||+|..... ..+++..+++|+.++.++++++ ++.++++||++||.......
T Consensus 69 ~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~~v~~ss~~~~~~~---- 144 (255)
T TIGR01963 69 IAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQGWGRIINIASAHGLVAS---- 144 (255)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhcCCC----
Confidence 3 5689999999864321 1123344678999988888777 55678899999997543221
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----cceee-------cccCcccCCccC
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNITL-------SQEDTLFGGQVS 284 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~~~~~-------~~~~~~~~~~v~ 284 (446)
.....|..+|...|.+++ ..+++++++|||+++++....... ..... -........+++
T Consensus 145 --~~~~~y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (255)
T TIGR01963 145 --PFKSAYVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPLVEKQIADQAKTRGIPEEQVIREVMLPGQPTKRFVT 222 (255)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHHHHHHhhhcccCCCchHHHHHHHHccCccccCcC
Confidence 223569999998887765 258999999999999884211000 00000 001112346899
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++|+|++++.++.+.. ...+++|++.++.
T Consensus 223 ~~d~a~~~~~~~~~~~~~~~g~~~~~~~g~ 252 (255)
T TIGR01963 223 VDEVAETALFLASDAAAGITGQAIVLDGGW 252 (255)
T ss_pred HHHHHHHHHHHcCccccCccceEEEEcCcc
Confidence 9999999999998643 2357889998764
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=9.3e-22 Score=188.32 Aligned_cols=216 Identities=16% Similarity=0.172 Sum_probs=156.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++++||||+|+||+++++.|+++|++|++ ..|+..+.+.+.+.++.. + .++.++.+|++|.+++
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 69 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEAL---------G----RKALAVKANVGDVEKI 69 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHHH
Confidence 4579999999999999999999999999876 578877766655555432 1 5688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
.++++ ++|+||||||..... ..++...+++|+.++.++++++.+ .+.++||++||.+....
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~-- 147 (250)
T PRK08063 70 KEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLMEKVGGGKIISLSSLGSIRY-- 147 (250)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcchhhccC--
Confidence 87764 589999999864321 112233467899999999888864 45679999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~~DvA~a 291 (446)
..+...|+.+|+.+|.+++ ..|+++++|+||++.++....... ..+. ........+.+++++|+|++
T Consensus 148 ----~~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 223 (250)
T PRK08063 148 ----LENYTTVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDALKHFPNREELLEDARAKTPAGRMVEPEDVANA 223 (250)
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCchhhhccCchHHHHHHhcCCCCCCCcCHHHHHHH
Confidence 1344579999999998875 368999999999998764221111 0110 00111223457999999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.++. ...++++++.++.
T Consensus 224 ~~~~~~~~~~~~~g~~~~~~gg~ 246 (250)
T PRK08063 224 VLFLCSPEADMIRGQTIIVDGGR 246 (250)
T ss_pred HHHHcCchhcCccCCEEEECCCe
Confidence 999997653 2357888877664
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.8e-22 Score=190.92 Aligned_cols=215 Identities=13% Similarity=0.097 Sum_probs=158.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+.++...+.+.+. .++.++.+|++|.+++
T Consensus 4 l~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~~ 67 (257)
T PRK07067 4 LQGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIG----------------PAAIAVSLDVTRQDSI 67 (257)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhC----------------CceEEEEccCCCHHHH
Confidence 456799999999999999999999999999999999877665543221 4588999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~~~ 219 (446)
++++. .+|+||||||.... +..+++..+++|+.++.++++++... ..++||++||......
T Consensus 68 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~- 146 (257)
T PRK07067 68 DRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRG- 146 (257)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCC-
Confidence 87764 68999999985421 22345566889999999999998643 1258999999654221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----ccce------eecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNI------TLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~~~------~~~~~~~~~~~ 281 (446)
..+...|+.+|...+.+.+ ..|+++++|+||+++++...... .... .........+.
T Consensus 147 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (257)
T PRK07067 147 -----EALVSHYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPMWDQVDALFARYENRPPGEKKRLVGEAVPLGR 221 (257)
T ss_pred -----CCCCchhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchhhhhhhhhhhhccCCCHHHHHHHHhhcCCCCC
Confidence 1345679999999887765 37899999999999997421100 0000 00011223557
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++|+|+++++++.+.. ...+++|++.++..
T Consensus 222 ~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~~ 255 (257)
T PRK07067 222 MGVPDDLTGMALFLASADADYIVAQTYNVDGGNW 255 (257)
T ss_pred ccCHHHHHHHHHHHhCcccccccCcEEeecCCEe
Confidence 8999999999999998653 24689999987753
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=99.88 E-value=4.9e-22 Score=189.08 Aligned_cols=220 Identities=28% Similarity=0.333 Sum_probs=159.1
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|+|+||||.+|+++++.|++.|++|++++|+.++.. .+.++. .+++++.+|+.|.+++.++|.
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~--~~~l~~---------------~g~~vv~~d~~~~~~l~~al~ 63 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDR--AQQLQA---------------LGAEVVEADYDDPESLVAALK 63 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHH--HHHHHH---------------TTTEEEES-TT-HHHHHHHHT
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhh--hhhhhc---------------ccceEeecccCCHHHHHHHHc
Confidence 799999999999999999999999999999984322 112222 467899999999999999999
Q ss_pred CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHH
Q 013273 163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL 242 (446)
Q Consensus 163 ~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (446)
++|+||++.+... ........+++++|+++|++|||+ ||.+.... ......+...+...|..+|+.+
T Consensus 64 g~d~v~~~~~~~~----------~~~~~~~~~li~Aa~~agVk~~v~-ss~~~~~~--~~~~~~p~~~~~~~k~~ie~~l 130 (233)
T PF05368_consen 64 GVDAVFSVTPPSH----------PSELEQQKNLIDAAKAAGVKHFVP-SSFGADYD--ESSGSEPEIPHFDQKAEIEEYL 130 (233)
T ss_dssp TCSEEEEESSCSC----------CCHHHHHHHHHHHHHHHT-SEEEE-SEESSGTT--TTTTSTTHHHHHHHHHHHHHHH
T ss_pred CCceEEeecCcch----------hhhhhhhhhHHHhhhccccceEEE-EEeccccc--ccccccccchhhhhhhhhhhhh
Confidence 9999999987532 124667899999999999999986 55443221 1111122334567899999999
Q ss_pred HhCCCCEEEEecCCccCCCccc-------cccc-ceeecccCcccCCc-cCHHHHHHHHHHHHhCCCCC-CCcEEEEecC
Q 013273 243 IASGLPYTIVRPGGMERPTDAY-------KETH-NITLSQEDTLFGGQ-VSNLQVAELLACMAKNRSLS-YCKVVEVIAE 312 (446)
Q Consensus 243 ~~~gl~~tivRPg~v~gp~~~~-------~~~~-~~~~~~~~~~~~~~-v~~~DvA~ai~~ll~~~~~~-~~~v~ni~~~ 312 (446)
++.|++||+||+|+++...... .... .+.+.........+ ++.+|+|++++.++.++... .++.+.+.+
T Consensus 131 ~~~~i~~t~i~~g~f~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~~~~~~~~~~~- 209 (233)
T PF05368_consen 131 RESGIPYTIIRPGFFMENLLPPFAPVVDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKHNNGKTIFLAG- 209 (233)
T ss_dssp HHCTSEBEEEEE-EEHHHHHTTTHHTTCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGTTEEEEEEEGG-
T ss_pred hhccccceeccccchhhhhhhhhcccccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHhcCCEEEEeCC-
Confidence 9999999999999986542110 1111 12222222212234 59999999999999998754 578888866
Q ss_pred CCCChhhHHHHHHhccCCCCC
Q 013273 313 TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 313 ~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+..+..++++++++.+|+...
T Consensus 210 ~~~t~~eia~~~s~~~G~~v~ 230 (233)
T PF05368_consen 210 ETLTYNEIAAILSKVLGKKVK 230 (233)
T ss_dssp GEEEHHHHHHHHHHHHTSEEE
T ss_pred CCCCHHHHHHHHHHHHCCccE
Confidence 567999999999999998643
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.4e-21 Score=187.71 Aligned_cols=216 Identities=16% Similarity=0.164 Sum_probs=154.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++|+||||+|+||+++++.|+++|++|+++ .|+.++.....+.+... ..++.++.+|++|.++
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~ 70 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESN-------------GGKAFLIEADLNSIDG 70 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCcEEEEEcCcCCHHH
Confidence 345799999999999999999999999999875 67766555544433211 1468899999999999
Q ss_pred HHHHhc-------------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 157 IEPALG-------------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 157 ~~~a~~-------------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+.++++ ++|+||||||..... ...+...+++|+.++.++++++.+. ..++||++||..+
T Consensus 71 i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~v~~sS~~~ 150 (254)
T PRK12746 71 VKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLLRAEGRVINISSAEV 150 (254)
T ss_pred HHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCHHh
Confidence 887764 589999999864321 1122445678999999999998753 3458999999766
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc-eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN-ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~-~~~~~~~~~~~~~v~~~ 286 (446)
... ......|+.+|...|.+.+ ..|+++++++||+++++..... .... .........++.+++++
T Consensus 151 ~~~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (254)
T PRK12746 151 RLG------FTGSIAYGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDINAKLLDDPEIRNFATNSSVFGRIGQVE 224 (254)
T ss_pred cCC------CCCCcchHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcchhhhccChhHHHHHHhcCCcCCCCCHH
Confidence 332 1334569999999987754 3689999999999998742211 0000 01111223356678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+|++++.++.+.. ...+++|++.++
T Consensus 225 dva~~~~~l~~~~~~~~~g~~~~i~~~ 251 (254)
T PRK12746 225 DIADAVAFLASSDSRWVTGQIIDVSGG 251 (254)
T ss_pred HHHHHHHHHcCcccCCcCCCEEEeCCC
Confidence 99999999887653 235789999765
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.8e-22 Score=193.02 Aligned_cols=171 Identities=25% Similarity=0.267 Sum_probs=107.1
Q ss_pred EECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHh---hhcccccccCCCCCCceEEEEcCCCCh-----
Q 013273 85 VAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQM---KLDGELANKGIQPVEMLELVECDLEKR----- 154 (446)
Q Consensus 85 VtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~---~l~~~~~~~g~~~~~~v~~v~~Dl~d~----- 154 (446)
|||||||||++|+++|++.+. +|++++|..+......+..+.+ .+.... . .....+++++.|||+++
T Consensus 1 lTGaTGflG~~ll~~Ll~~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~--~-~~~~~ri~~v~GDl~~~~lGL~ 77 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLRQPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDL--D-KEALSRIEVVEGDLSQPNLGLS 77 (249)
T ss_dssp EE-TTSHHHHHHHHHHHHHS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH----HHHTTTEEEEE--TTSGGGG--
T ss_pred CcCCCcHHHHHHHHHHHcCCCCcEEEEEEeCcccccchhhhhhhcccccchhhh--h-hhhhccEEEEeccccccccCCC
Confidence 799999999999999999986 9999999876543332222221 111100 0 00137999999999974
Q ss_pred -hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc---------h--
Q 013273 155 -VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP---------A-- 222 (446)
Q Consensus 155 -~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~---------~-- 222 (446)
+.++.+.+.+|+|||||+..... .++...+++|+.|+.+|++.|.+.+.++|+|+||..+...... .
T Consensus 78 ~~~~~~L~~~v~~IiH~Aa~v~~~-~~~~~~~~~NV~gt~~ll~la~~~~~~~~~~iSTa~v~~~~~~~~~~~~~~~~~~ 156 (249)
T PF07993_consen 78 DEDYQELAEEVDVIIHCAASVNFN-APYSELRAVNVDGTRNLLRLAAQGKRKRFHYISTAYVAGSRPGTIEEKVYPEEED 156 (249)
T ss_dssp HHHHHHHHHH--EEEE--SS-SBS--S--EEHHHHHHHHHHHHHHHTSSS---EEEEEEGGGTTS-TTT--SSS-HHH--
T ss_pred hHHhhccccccceeeecchhhhhc-ccchhhhhhHHHHHHHHHHHHHhccCcceEEeccccccCCCCCcccccccccccc
Confidence 45777778999999999876432 3556678999999999999999777779999999544222110 0
Q ss_pred ---hhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccC
Q 013273 223 ---AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER 259 (446)
Q Consensus 223 ---~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~g 259 (446)
......++|..||+.+|+++++ .|++++|+|||.|+|
T Consensus 157 ~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g 200 (249)
T PF07993_consen 157 DLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVG 200 (249)
T ss_dssp EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-
T ss_pred cchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccc
Confidence 1123345899999999999984 399999999999999
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.3e-21 Score=189.24 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=144.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+. ...++.++.+|++|.+++.
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~----------------~~~~~~~~~~D~~d~~~~~ 66 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEAL----------------HPDRALARLLDVTDFDAID 66 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhh----------------cCCCeeEEEccCCCHHHHH
Confidence 467899999999999999999999999999999998765544321 1146889999999999887
Q ss_pred HHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ ++|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||.+....
T Consensus 67 ~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~iSS~~~~~~--- 143 (277)
T PRK06180 67 AVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMRARRRGHIVNITSMGGLIT--- 143 (277)
T ss_pred HHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCCEEEEEecccccCC---
Confidence 7764 689999999964321 11234457899999999999864 446679999999765332
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecc------------cCcccCC
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQ------------EDTLFGG 281 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~------------~~~~~~~ 281 (446)
..+...|+.+|..+|.+++ ..|+++++||||+++++........ ...... .......
T Consensus 144 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (277)
T PRK06180 144 ---MPGIGYYCGSKFALEGISESLAKEVAPFGIHVTAVEPGSFRTDWAGRSMVRTPRSIADYDALFGPIRQAREAKSGKQ 220 (277)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEecCCcccCccccccccCCCCcHhHHHHHHHHHHHHHhhccCC
Confidence 1345679999999887765 2599999999999987632110000 000000 0011124
Q ss_pred ccCHHHHHHHHHHHHhCCC
Q 013273 282 QVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~ 300 (446)
+.+++|+|++++.++.++.
T Consensus 221 ~~~~~dva~~~~~~l~~~~ 239 (277)
T PRK06180 221 PGDPAKAAQAILAAVESDE 239 (277)
T ss_pred CCCHHHHHHHHHHHHcCCC
Confidence 5789999999999998765
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.3e-21 Score=186.08 Aligned_cols=217 Identities=16% Similarity=0.129 Sum_probs=156.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|++.+...+...++.. + .++.++.+|+.|.+++
T Consensus 3 ~~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 69 (246)
T PRK05653 3 LQGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAA---------G----GEARVLVFDVSDEAAV 69 (246)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhc---------C----CceEEEEccCCCHHHH
Confidence 44579999999999999999999999999999999987766555444322 1 5688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
.+++. .+|+|||++|...... .++...+++|+.+..++++++. +.+.++||++||.+....
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~ii~~ss~~~~~~-- 147 (246)
T PRK05653 70 RALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMIKARYGRIVNISSVSGVTG-- 147 (246)
T ss_pred HHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhccC--
Confidence 77664 4699999998643311 1233447789999999988884 557789999999765322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
..+...|..+|...|.+++ ..+++++++|||.++++...................+.+++++|+|++++
T Consensus 148 ----~~~~~~y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 223 (246)
T PRK05653 148 ----NPGQTNYSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTEGLPEEVKAEILKEIPLGRLGQPEEVANAVA 223 (246)
T ss_pred ----CCCCcHhHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1344569999988776654 35899999999999998542101000000001111245789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.++.... ...+++|++.++.
T Consensus 224 ~~~~~~~~~~~g~~~~~~gg~ 244 (246)
T PRK05653 224 FLASDAASYITGQVIPVNGGM 244 (246)
T ss_pred HHcCchhcCccCCEEEeCCCe
Confidence 9997532 2357899988874
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=1.5e-21 Score=187.84 Aligned_cols=225 Identities=17% Similarity=0.110 Sum_probs=162.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++++||||+|+||+++++.|+++|++|++++|+.++...+.+.+. ..+++++.+|+.|.+++.+
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~~~~ 66 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALG---------------DARFVPVACDLTDAASLAA 66 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence 4689999999999999999999999999999999877665544321 1468899999999998887
Q ss_pred Hhc-------CCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 160 ALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++. ++|+||||+|...... .++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 67 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--- 143 (257)
T PRK07074 67 ALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGMLKRSRGAVVNIGSVNGMAAL--- 143 (257)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhcCCC---
Confidence 764 5899999998643211 1122335689999988888883 4566799999996542211
Q ss_pred hhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc-cceeec--ccCcccCCccCHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNITLS--QEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~-~~~~~~--~~~~~~~~~v~~~DvA~ai 292 (446)
....|+.+|...+.+++. .|++++++|||+++++....... ...... ......+.+++++|+++++
T Consensus 144 ----~~~~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~ 219 (257)
T PRK07074 144 ----GHPAYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQAWEARVAANPQVFEELKKWYPLQDFATPDDVANAV 219 (257)
T ss_pred ----CCcccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcchhhcccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 123699999999877652 58999999999999874221100 000000 0112245689999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHh
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAK 326 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~ 326 (446)
+.++.+.. ...++++++.++....+.++.+.+.+
T Consensus 220 ~~l~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~~~ 254 (257)
T PRK07074 220 LFLASPAARAITGVCLPVDGGLTAGNREMARTLTL 254 (257)
T ss_pred HHHcCchhcCcCCcEEEeCCCcCcCChhhhhhhcc
Confidence 99997532 23578888988887777887776654
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=3e-21 Score=184.66 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=154.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+..+...+...++. ..++.++.+|+.|.+++
T Consensus 3 ~~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~ 68 (251)
T PRK07231 3 LEGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILA--------------GGRAIAVAADVSDEADV 68 (251)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------CCeEEEEECCCCCHHHH
Confidence 4567999999999999999999999999999999998776665443321 14688999999999999
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+.++. ++|+||||+|.... +..+++..+++|+.++.++++.+. +.+.++||++||......
T Consensus 69 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~- 147 (251)
T PRK07231 69 EAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMRGEGGGAIVNVASTAGLRP- 147 (251)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhcCC-
Confidence 87763 67999999986321 122344567889998888777665 456789999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc---cee-ecccCcccCCccCHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH---NIT-LSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~---~~~-~~~~~~~~~~~v~~~Dv 288 (446)
......|+.+|...+.+++ ..|+++++++||++.++........ ... ........+.+++++|+
T Consensus 148 -----~~~~~~y~~sk~~~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 222 (251)
T PRK07231 148 -----RPGLGWYNASKGAVITLTKALAAELGPDKIRVNAVAPVVVETGLLEAFMGEPTPENRAKFLATIPLGRLGTPEDI 222 (251)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEECccCCCcchhhhcccChHHHHHHhcCCCCCCCcCHHHH
Confidence 2345579999998887665 2489999999999977632111000 000 00111223457899999
Q ss_pred HHHHHHHHhCCCC-CCCcEEEEecCC
Q 013273 289 AELLACMAKNRSL-SYCKVVEVIAET 313 (446)
Q Consensus 289 A~ai~~ll~~~~~-~~~~v~ni~~~~ 313 (446)
|++++.++.+... ..+..+.+.++.
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~gg~ 248 (251)
T PRK07231 223 ANAALFLASDEASWITGVTLVVDGGR 248 (251)
T ss_pred HHHHHHHhCccccCCCCCeEEECCCc
Confidence 9999999976532 346667776553
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.2e-21 Score=185.79 Aligned_cols=215 Identities=11% Similarity=0.030 Sum_probs=156.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++++||||+|+||+++++.|+++|++|++++|+.+....+.+.+... ..++.++.+|++|.+++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~ 70 (250)
T PRK07774 4 FDDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVAD-------------GGTAIAVQVDVSDPDSA 70 (250)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHH
Confidence 45678999999999999999999999999999999987666655444321 14678899999999887
Q ss_pred HHHh-------cCCCEEEEcccCCCC---------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccC
Q 013273 158 EPAL-------GNASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~---------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~ 217 (446)
++++ +.+|+||||||.... +..++...+++|+.++.++++++.+. +.++||++||.++..
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (250)
T PRK07774 71 KAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMAKRGGGAIVNQSSTAAWL 150 (250)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCcEEEEEecccccC
Confidence 7665 368999999996421 11223445789999999999888643 457999999977632
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA 289 (446)
+...|+.+|+..|.+++. .|+++++++||.+.++........... ..........+.+++|+|
T Consensus 151 ---------~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a 221 (250)
T PRK07774 151 ---------YSNFYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEATRTVTPKEFVADMVKGIPLSRMGTPEDLV 221 (250)
T ss_pred ---------CccccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 235699999999988752 489999999999987753211000000 000111122357899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++.++.+.. ...+++||+.++..
T Consensus 222 ~~~~~~~~~~~~~~~g~~~~v~~g~~ 247 (250)
T PRK07774 222 GMCLFLLSDEASWITGQIFNVDGGQI 247 (250)
T ss_pred HHHHHHhChhhhCcCCCEEEECCCee
Confidence 99999988643 24688999988754
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=205.79 Aligned_cols=252 Identities=13% Similarity=0.098 Sum_probs=170.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHH---HHHHHHHhhh-------cccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAEN---LVQSVKQMKL-------DGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~---l~~~~~~~~l-------~~~~~~~g~~~~~~v 144 (446)
..+++|||||||||||++|++.|++.+ .+|+++.|..+.... +.+++....+ .|.. ...+...++
T Consensus 117 ~~~k~VlVTGaTGFLGk~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~--~~~~~~~Ki 194 (605)
T PLN02503 117 LRGKNFLITGATGFLAKVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKS--YQSFMLSKL 194 (605)
T ss_pred hcCCEEEEcCCchHHHHHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCcc--ccccccccE
Confidence 357899999999999999999999875 378999997643222 2111111000 0000 000123689
Q ss_pred EEEEcCCCCh------hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccC
Q 013273 145 ELVECDLEKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNK 217 (446)
Q Consensus 145 ~~v~~Dl~d~------~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~ 217 (446)
.++.+|++++ +.++.+..++|+|||+|+..... .++...+++|+.|+.+++++|++. +.++|||+||..++.
T Consensus 195 ~~v~GDl~d~~LGLs~~~~~~L~~~vDiVIH~AA~v~f~-~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG 273 (605)
T PLN02503 195 VPVVGNVCESNLGLEPDLADEIAKEVDVIINSAANTTFD-ERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNG 273 (605)
T ss_pred EEEEeeCCCcccCCCHHHHHHHHhcCCEEEECccccccc-cCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeec
Confidence 9999999986 35566678899999999875432 345666889999999999999886 578999999976632
Q ss_pred CCC--------c--h-------------------hh-----------h-----------------------chhhHHHHH
Q 013273 218 FGF--------P--A-------------------AI-----------L-----------------------NLFWGVLLW 234 (446)
Q Consensus 218 ~~~--------~--~-------------------~~-----------~-----------------------~~~~~Y~~s 234 (446)
... + + ++ . ..-+.|..+
T Consensus 274 ~~~G~i~E~~y~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~~pNtYt~T 353 (605)
T PLN02503 274 QRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYGWQDTYVFT 353 (605)
T ss_pred CCCCeeeeeecCcccccccccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCCCCChHHHH
Confidence 210 0 0 00 0 001459999
Q ss_pred HHHHHHHHHh--CCCCEEEEecCCcc----------CCCcccccccceeec--------ccCcccCCccCHHHHHHHHHH
Q 013273 235 KRKAEEALIA--SGLPYTIVRPGGME----------RPTDAYKETHNITLS--------QEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 235 K~~~E~~l~~--~gl~~tivRPg~v~----------gp~~~~~~~~~~~~~--------~~~~~~~~~v~~~DvA~ai~~ 294 (446)
|..+|+++++ .+++++|+||+.|. ++++.......+..+ .......+.|+++.|+++++.
T Consensus 354 K~lAE~lV~~~~~~LPv~IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~ 433 (605)
T PLN02503 354 KAMGEMVINSMRGDIPVVIIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLA 433 (605)
T ss_pred HHHHHHHHHHhcCCCCEEEEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHH
Confidence 9999999985 47999999999993 332211111111111 112223357999999999999
Q ss_pred HHhC-CC--CCCCcEEEEecC--CCCChhhHHHHHHhccCCCC
Q 013273 295 MAKN-RS--LSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 295 ll~~-~~--~~~~~v~ni~~~--~~~t~~~i~e~l~~i~~~~~ 332 (446)
++.. .. ...+.+||++++ ++.++.++.+++.+.+.+.+
T Consensus 434 a~a~~~~~~~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~~~P 476 (605)
T PLN02503 434 AMAKHGGAAKPEINVYQIASSVVNPLVFQDLARLLYEHYKSSP 476 (605)
T ss_pred HHHhhhcccCCCCCEEEeCCCCCCCeEHHHHHHHHHHHHhhCC
Confidence 8432 11 124789999988 88899999999998876654
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=2.4e-21 Score=188.95 Aligned_cols=218 Identities=17% Similarity=0.175 Sum_probs=154.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.++++|||||+|+||+++++.|+++|++|++++|+.+....+.+.+... + ...+++++.+|++|.++++
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~--~~~~~~~~~~D~~d~~~~~ 70 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQL---------N--LQQNIKVQQLDVTDQNSIH 70 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc---------C--CCCceeEEecCCCCHHHHH
Confidence 3568999999999999999999999999999999987776655444322 0 1147899999999988876
Q ss_pred H---H---hcCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 159 P---A---LGNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 159 ~---a---~~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+ + ++.+|+||||||..... ..++...+++|+.++.++++++ ++.+.++||++||.+....
T Consensus 71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~vsS~~~~~~---- 146 (280)
T PRK06914 71 NFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQKSGKIINISSISGRVG---- 146 (280)
T ss_pred HHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEECcccccCC----
Confidence 5 1 24679999999864321 1223445678999998888885 5567789999999754222
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeec--------------ccCcccC
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLS--------------QEDTLFG 280 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~--------------~~~~~~~ 280 (446)
..+...|+.+|...+.+++ ..|++++++|||.++++........ ..... .......
T Consensus 147 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (280)
T PRK06914 147 --FPGLSPYVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKHINSGSD 224 (280)
T ss_pred --CCCCchhHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHHHhhhhh
Confidence 1344579999999887765 3589999999999998732110000 00000 0001123
Q ss_pred CccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
.+++++|+|++++.+++++.. ...|+++++...
T Consensus 225 ~~~~~~dva~~~~~~~~~~~~--~~~~~~~~~~~~ 257 (280)
T PRK06914 225 TFGNPIDVANLIVEIAESKRP--KLRYPIGKGVKL 257 (280)
T ss_pred ccCCHHHHHHHHHHHHcCCCC--CcccccCCchHH
Confidence 468999999999999998763 356888766543
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.9e-21 Score=184.71 Aligned_cols=217 Identities=14% Similarity=0.084 Sum_probs=154.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++++||||+|+||++++++|+++|++|+++.+ ++...+.+.+.++.. + .++.++.+|+.|.++
T Consensus 4 ~~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 70 (247)
T PRK12935 4 LNGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKE---------G----HDVYAVQADVSKVED 70 (247)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHH
Confidence 34689999999999999999999999999987655 444444443433321 1 468999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+.++++ .+|+||||||..... ..++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 71 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 150 (247)
T PRK12935 71 ANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEAEEGRIISISSIIGQAGG 150 (247)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchhhcCCC
Confidence 887774 479999999964321 133455578999999999998864 345699999997553221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.++..|+.+|...+.+++ ..|+++++++||++.++...................+.+.+++|+++++
T Consensus 151 ------~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~edva~~~ 224 (247)
T PRK12935 151 ------FGQTNYSAAKAGMLGFTKSLALELAKTNVTVNAICPGFIDTEMVAEVPEEVRQKIVAKIPKKRFGQADEIAKGV 224 (247)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHHHcCcEEEEEEeCCCcChhhhhccHHHHHHHHHhCCCCCCcCHHHHHHHH
Confidence 345679999998887754 2589999999999987631110000000000112234579999999999
Q ss_pred HHHHhCCCCCCCcEEEEecCC
Q 013273 293 ACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~~~~~~v~ni~~~~ 313 (446)
+++++......+++||+.++.
T Consensus 225 ~~~~~~~~~~~g~~~~i~~g~ 245 (247)
T PRK12935 225 VYLCRDGAYITGQQLNINGGL 245 (247)
T ss_pred HHHcCcccCccCCEEEeCCCc
Confidence 999976543568999998763
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.9e-21 Score=186.35 Aligned_cols=206 Identities=17% Similarity=0.215 Sum_probs=146.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|+||||+|+||++++++|+++|++|++++|+.++...+.. .+++++.+|++|.++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~~-------------------~~~~~~~~Dv~~~~~~~ 62 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLAS-------------------LGVHPLSLDVTDEASIK 62 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHH
Confidence 35789999999999999999999999999999999876554321 35889999999999988
Q ss_pred HHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHH----HHHhCCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~----aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ ++|+||||||.... +..+++..+++|+.++.++++ .+++.+.++||++||.+...+.
T Consensus 63 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~-- 140 (273)
T PRK06182 63 AAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQRSGRIINISSMGGKIYT-- 140 (273)
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhcCCC--
Confidence 8774 78999999996432 223345567889988655554 5566677899999997653221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee-e-----c----------ccCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-L-----S----------QEDTL 278 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~-~-----~----------~~~~~ 278 (446)
.....|+.+|...+.+.+ ..|+++++||||++.++........... . . .....
T Consensus 141 ----~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (273)
T PRK06182 141 ----PLGAWYHATKFALEGFSDALRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAASMRSTYG 216 (273)
T ss_pred ----CCccHhHHHHHHHHHHHHHHHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHHHHHHhhc
Confidence 122359999999997753 3699999999999998743211000000 0 0 00001
Q ss_pred cCCccCHHHHHHHHHHHHhCCCCCCCcEEEEec
Q 013273 279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~ 311 (446)
.+.+.+++|+|++++.++.... ....|+++.
T Consensus 217 ~~~~~~~~~vA~~i~~~~~~~~--~~~~~~~g~ 247 (273)
T PRK06182 217 SGRLSDPSVIADAISKAVTARR--PKTRYAVGF 247 (273)
T ss_pred cccCCCHHHHHHHHHHHHhCCC--CCceeecCc
Confidence 2345799999999999998643 134565543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.5e-21 Score=185.83 Aligned_cols=213 Identities=19% Similarity=0.184 Sum_probs=152.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++++||||+|+||+++++.|+++|++|++++|+......+.+.+... + .++.++.+|++|.+++
T Consensus 8 ~~~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 74 (274)
T PRK07775 8 PDRRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRAD---------G----GEAVAFPLDVTDPDSV 74 (274)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHHH
Confidence 45579999999999999999999999999999999877665544433321 1 4688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
.++++ .+|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~~~~~g~iv~isS~~~~~~~- 153 (274)
T PRK07775 75 KSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMIERRRGDLIFVGSDVALRQR- 153 (274)
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECChHhcCCC-
Confidence 87663 679999999864321 12233446899999999988875 3455689999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCC-cccccccce-eec----ccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DAYKETHNI-TLS----QEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~-~~~~~~~~~-~~~----~~~~~~~~~v~~~D 287 (446)
.....|+.+|+..|.+++. .|+++++||||.+.++. ......... .+. ......+.+++++|
T Consensus 154 -----~~~~~Y~~sK~a~~~l~~~~~~~~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 228 (274)
T PRK07775 154 -----PHMGAYGAAKAGLEAMVTNLQMELEGTGVRASIVHPGPTLTGMGWSLPAEVIGPMLEDWAKWGQARHDYFLRASD 228 (274)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCCcccCcccccCChhhhhHHHHHHHHhcccccccccCHHH
Confidence 2345699999999988762 48999999999986552 111100000 000 01112345899999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEec
Q 013273 288 VAELLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 288 vA~ai~~ll~~~~~~~~~v~ni~~ 311 (446)
+|+++++++.++. .+.+||+.-
T Consensus 229 va~a~~~~~~~~~--~~~~~~~~~ 250 (274)
T PRK07775 229 LARAITFVAETPR--GAHVVNMEV 250 (274)
T ss_pred HHHHHHHHhcCCC--CCCeeEEee
Confidence 9999999998763 466888763
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.3e-21 Score=181.89 Aligned_cols=207 Identities=17% Similarity=0.146 Sum_probs=153.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++||||||+|+||+++++.|+++|++|++++|+..+..+..+.+.. .+++++.+|+.|.+++
T Consensus 5 ~~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~---------------~~~~~~~~D~~~~~~~ 69 (239)
T PRK12828 5 LQGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPA---------------DALRIGGIDLVDPQAA 69 (239)
T ss_pred CCCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhh---------------cCceEEEeecCCHHHH
Confidence 3467999999999999999999999999999999988766554433321 3567888999998888
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
.++++ ++|+|||++|.... ...++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~- 148 (239)
T PRK12828 70 RRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALTASGGGRIVNIGAGAALKAG- 148 (239)
T ss_pred HHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHHhcCCCEEEEECchHhccCC-
Confidence 77663 68999999985421 112233446789999999888874 4577899999998764322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+++ ..+++++++|||+++++..... . .......+++++|+|++++
T Consensus 149 -----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~~~~~----~----~~~~~~~~~~~~dva~~~~ 215 (239)
T PRK12828 149 -----PGMGAYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPPNRAD----M----PDADFSRWVTPEQIAAVIA 215 (239)
T ss_pred -----CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcchhhc----C----CchhhhcCCCHHHHHHHHH
Confidence 234579999998876664 3689999999999998842111 0 0111334799999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.+.. ...++.+++.++.
T Consensus 216 ~~l~~~~~~~~g~~~~~~g~~ 236 (239)
T PRK12828 216 FLLSDEAQAITGASIPVDGGV 236 (239)
T ss_pred HHhCcccccccceEEEecCCE
Confidence 9998653 2357888887764
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2e-21 Score=186.68 Aligned_cols=220 Identities=16% Similarity=0.129 Sum_probs=150.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+++.+.+... .....+.++.+|+.|.+++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~d~~~~ 70 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKE-----------FKSKKLSLVELDITDQESL 70 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhh-----------cCCCceeEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777665554321 0114577889999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC---------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccC
Q 013273 158 EPALG-------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~---------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~ 217 (446)
.++++ ++|+||||||.... +..++...+++|+.+...+++++ ++.+.++||++||..+..
T Consensus 71 ~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~ 150 (256)
T PRK09186 71 EEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQGGGNLVNISSIYGVV 150 (256)
T ss_pred HHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCceEEEEechhhhc
Confidence 88774 48999999974321 11123344667887776665555 445778999999965421
Q ss_pred C-CC---chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHH
Q 013273 218 F-GF---PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 218 ~-~~---~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~ 286 (446)
. .. +.........|+.+|...+.+.+ ..|+++++++||+++++..... ............+++++
T Consensus 151 ~~~~~~~~~~~~~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 226 (256)
T PRK09186 151 APKFEIYEGTSMTSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQPEAF----LNAYKKCCNGKGMLDPD 226 (256)
T ss_pred cccchhccccccCCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCCCHHH----HHHHHhcCCccCCCCHH
Confidence 1 10 11111122369999999887764 3689999999999987532100 00000111234579999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+|+++++++.+.. ...++++++.++
T Consensus 227 dva~~~~~l~~~~~~~~~g~~~~~~~g 253 (256)
T PRK09186 227 DICGTLVFLLSDQSKYITGQNIIVDDG 253 (256)
T ss_pred HhhhhHhheeccccccccCceEEecCC
Confidence 99999999997654 235677766654
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.1e-20 Score=180.81 Aligned_cols=215 Identities=14% Similarity=0.110 Sum_probs=156.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++++|||||+|+||++++++|+++|++|++++|+.++...+.+.++.. ..++.++.+|+.|.++++
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~d~~~~~~~~ 68 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAK-------------GGNAQAFACDITDRDSVD 68 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc-------------CCcEEEEEcCCCCHHHHH
Confidence 4578999999999999999999999999999999987776665544321 156899999999999888
Q ss_pred HHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++. ++|+||||+|.... ...+++..+++|+.++.++++++. +.+.++||++||.++....
T Consensus 69 ~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~iss~~~~~~~-- 146 (250)
T TIGR03206 69 TAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVERGAGRIVNIASDAARVGS-- 146 (250)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEECchhhccCC--
Confidence 8763 68999999985322 112234457899999999888775 4567899999997663321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc----ccc-e-eecccCcccCCccCHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE----THN-I-TLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~----~~~-~-~~~~~~~~~~~~v~~~Dv 288 (446)
.....|+.+|++.+.+++ ..+++++++|||+++++...... ... + .........+....++|+
T Consensus 147 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 222 (250)
T TIGR03206 147 ----SGEAVYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTALLDDICGGAENPEKLREAFTRAIPLGRLGQPDDL 222 (250)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchhHHhhhhccCChHHHHHHHHhcCCccCCcCHHHH
Confidence 234569999988877665 25899999999999987421100 000 0 000111223446789999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+++++++.++. ...++++++.++
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~~g 247 (250)
T TIGR03206 223 PGAILFFSSDDASFITGQVLSVSGG 247 (250)
T ss_pred HHHHHHHcCcccCCCcCcEEEeCCC
Confidence 999999987653 235789988765
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.1e-21 Score=188.57 Aligned_cols=218 Identities=16% Similarity=0.145 Sum_probs=157.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+|+||+++++.|+++|++|++..|+.+ ..+.+.+.++.. + .++.++.+|++|.+
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~ 119 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAE---------G----RKAVALPGDLKDEA 119 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHc---------C----CeEEEEecCCCCHH
Confidence 45689999999999999999999999999998887643 223333333221 1 46889999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCC--C-----ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASE--K-----EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~--~-----~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~ 219 (446)
++++++ +++|+||||||... . +..+++..+++|+.++.++++++... ..++||++||..+....
T Consensus 120 ~v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~~~~~ 199 (300)
T PRK06128 120 FCRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQSYQPS 199 (300)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccccCCC
Confidence 887765 46899999999532 1 22345667899999999999999753 23599999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccc-eeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN-ITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~-~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+++ ..|+++++|+||++.++...... ... ..........+.+.+++|+|+
T Consensus 200 ------~~~~~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~ 273 (300)
T PRK06128 200 ------PTLLDYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPLQPSGGQPPEKIPDFGSETPMKRPGQPVEMAP 273 (300)
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCCcccCCCCHHHHHHHhcCCCCCCCcCHHHHHH
Confidence 234569999999988765 26999999999999988421100 000 000011223445689999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++++.+.. ...+++|++.++..
T Consensus 274 ~~~~l~s~~~~~~~G~~~~v~gg~~ 298 (300)
T PRK06128 274 LYVLLASQESSYVTGEVFGVTGGLL 298 (300)
T ss_pred HHHHHhCccccCccCcEEeeCCCEe
Confidence 9999987643 34688999987753
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.87 E-value=6e-21 Score=186.27 Aligned_cols=218 Identities=14% Similarity=0.111 Sum_probs=155.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||++++++|+++|++|++++|+.+....+.+.+. ...++.++++|++|.+++
T Consensus 16 l~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~ 81 (280)
T PLN02253 16 LLGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLG--------------GEPNVCFFHCDVTVEDDV 81 (280)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhc--------------CCCceEEEEeecCCHHHH
Confidence 457899999999999999999999999999999998766555433221 114789999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++.+ .+.+++|++||......
T Consensus 82 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 161 (280)
T PLN02253 82 SRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPLKKGSIVSLCSVASAIG 161 (280)
T ss_pred HHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCceEEEecChhhccc
Confidence 88774 68999999986421 1223456689999999999888753 34468999999765322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--ccc---ce------eecccCcccC
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETH---NI------TLSQEDTLFG 280 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~~~---~~------~~~~~~~~~~ 280 (446)
. .....|+.+|...|.+.+ ..|+++++++||++.++..... ... .. .......+.+
T Consensus 162 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 235 (280)
T PLN02253 162 G------LGPHAYTGSKHAVLGLTRSVAAELGKHGIRVNCVSPYAVPTALALAHLPEDERTEDALAGFRAFAGKNANLKG 235 (280)
T ss_pred C------CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccccccccccccchhhhhhhhHHHhhcCCCCcC
Confidence 1 123469999999998875 2589999999999987632110 000 00 0000111123
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
..++++|+|+++++++.+.. ...++++++.++...
T Consensus 236 ~~~~~~dva~~~~~l~s~~~~~i~G~~i~vdgG~~~ 271 (280)
T PLN02253 236 VELTVDDVANAVLFLASDEARYISGLNLMIDGGFTC 271 (280)
T ss_pred CCCCHHHHHHHHHhhcCcccccccCcEEEECCchhh
Confidence 35899999999999987643 235788888776443
|
|
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-21 Score=190.64 Aligned_cols=177 Identities=23% Similarity=0.230 Sum_probs=136.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC------
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK------ 153 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d------ 153 (446)
++||+||||||+|++|+++|+.+- .+|+|++|..+....+.+..+.....+. +......+|+++.+|+..
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~---~~e~~~~ri~vv~gDl~e~~lGL~ 77 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLDRSDAKVICLVRAQSDEAALARLEKTFDLYRH---WDELSADRVEVVAGDLAEPDLGLS 77 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHHhhhhhh---hhhhhcceEEEEecccccccCCCC
Confidence 479999999999999999999874 6999999987744443333332221111 112344899999999983
Q ss_pred hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch-----------
Q 013273 154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA----------- 222 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~----------- 222 (446)
...++++.+.+|.||||++... ....+.+.+..|+.|+..+++.|...+.|.|+||||+++..+....
T Consensus 78 ~~~~~~La~~vD~I~H~gA~Vn-~v~pYs~L~~~NVlGT~evlrLa~~gk~Kp~~yVSsisv~~~~~~~~~~~~~~~~~~ 156 (382)
T COG3320 78 ERTWQELAENVDLIIHNAALVN-HVFPYSELRGANVLGTAEVLRLAATGKPKPLHYVSSISVGETEYYSNFTVDFDEISP 156 (382)
T ss_pred HHHHHHHhhhcceEEecchhhc-ccCcHHHhcCcchHhHHHHHHHHhcCCCceeEEEeeeeeccccccCCCccccccccc
Confidence 4678888899999999987654 3566677788999999999999999889999999998884432111
Q ss_pred ---hhhchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCC
Q 013273 223 ---AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPT 261 (446)
Q Consensus 223 ---~~~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~ 261 (446)
....+.++|+.|||.+|.++++ .|++++|+|||.|.|..
T Consensus 157 ~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds 201 (382)
T COG3320 157 TRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDS 201 (382)
T ss_pred cccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccC
Confidence 1123457899999999999984 69999999999999874
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=2.2e-20 Score=182.36 Aligned_cols=225 Identities=17% Similarity=0.101 Sum_probs=156.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.+....+.++++.. + .++.++.+|++|.+++
T Consensus 4 ~~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~v 70 (275)
T PRK05876 4 FPGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAE---------G----FDVHGVMCDVRHREEV 70 (275)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEeCCCCCHHHH
Confidence 45789999999999999999999999999999999987776665554321 1 4688899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCC-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~-v~r~V~vSS~~~~~~~ 219 (446)
.+++ +.+|+||||||.... ...+++..+++|+.++.++++++. +.+ .++||++||......
T Consensus 71 ~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~~~- 149 (275)
T PRK05876 71 THLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGLVP- 149 (275)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhccC-
Confidence 8776 357999999996422 122344557899999999998875 343 468999999765332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce--e------ecccCcccCCcc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI--T------LSQEDTLFGGQV 283 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~--~------~~~~~~~~~~~v 283 (446)
..+...|+.+|...+.+.+ ..|+++++|+||++.++........ .. . ..........++
T Consensus 150 -----~~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (275)
T PRK05876 150 -----NAGLGAYGVAKYGVVGLAETLAREVTADGIGVSVLCPMVVETNLVANSERIRGAACAQSSTTGSPGPLPLQDDNL 224 (275)
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCccccccccchhhhcCccccccccccccccccccccCC
Confidence 2345679999997554432 3689999999999988742111000 00 0 000011123468
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
+++|+|++++.++.+.. .|-+.+. .....+.+.+.++.
T Consensus 225 ~~~dva~~~~~ai~~~~-----~~~~~~~--~~~~~~~~~~~~~~ 262 (275)
T PRK05876 225 GVDDIAQLTADAILANR-----LYVLPHA--ASRASIRRRFERID 262 (275)
T ss_pred CHHHHHHHHHHHHHcCC-----eEEecCh--hhHHHHHHHHHHHH
Confidence 99999999999997653 3434332 23455555555543
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.87 E-value=3.3e-21 Score=181.54 Aligned_cols=223 Identities=14% Similarity=0.137 Sum_probs=150.0
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|+|||||||||++|+..|.+.||+|++++|++.+..+... ..+. .-+.+.++..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~~~-------------------~~v~-------~~~~~~~~~~ 54 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQNLH-------------------PNVT-------LWEGLADALT 54 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhhcC-------------------cccc-------ccchhhhccc
Confidence 6899999999999999999999999999999987654210 1121 1233444444
Q ss_pred -CCCEEEEcccCCCCcc-CCC---CCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch--------hhhchhh
Q 013273 163 -NASVVICCIGASEKEV-FDI---TGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA--------AILNLFW 229 (446)
Q Consensus 163 -~~D~VI~~Ag~~~~~~-~~~---~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~--------~~~~~~~ 229 (446)
++|+|||+||..-... +.. +..++..+..|..|+++..+..-+.=+++|..++..|+... .+.+.+.
T Consensus 55 ~~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~~~g~~Fl 134 (297)
T COG1090 55 LGIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEESPPGDDFL 134 (297)
T ss_pred CCCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCCCCCCChH
Confidence 7999999999654332 221 22355678899999999985543333444444443344221 1112222
Q ss_pred HHHHHHHHHHHH-HHhCCCCEEEEecCCccCCCcccccccceee--c-----ccCcccCCccCHHHHHHHHHHHHhCCCC
Q 013273 230 GVLLWKRKAEEA-LIASGLPYTIVRPGGMERPTDAYKETHNITL--S-----QEDTLFGGQVSNLQVAELLACMAKNRSL 301 (446)
Q Consensus 230 ~Y~~sK~~~E~~-l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~--~-----~~~~~~~~~v~~~DvA~ai~~ll~~~~~ 301 (446)
.-.+--|.-|.. ....|.+++++|.|.|.++.......+.... + ..+..+..|||++|+.++|.++++|..
T Consensus 135 a~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL~~m~~~fk~glGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~- 213 (297)
T COG1090 135 AQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGALGKMLPLFKLGLGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ- 213 (297)
T ss_pred HHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcchhhhcchhhhccCCccCCCCceeeeeeHHHHHHHHHHHHhCcC-
Confidence 222222322222 1246999999999999998654432222211 1 124456679999999999999999986
Q ss_pred CCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 302 ~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
..+.||++++.+++..++...+.++..+...
T Consensus 214 -lsGp~N~taP~PV~~~~F~~al~r~l~RP~~ 244 (297)
T COG1090 214 -LSGPFNLTAPNPVRNKEFAHALGRALHRPAI 244 (297)
T ss_pred -CCCcccccCCCcCcHHHHHHHHHHHhCCCcc
Confidence 3779999999999999999999999987654
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.6e-21 Score=182.15 Aligned_cols=217 Identities=13% Similarity=0.108 Sum_probs=158.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|++++...+.+.++.. + .++.++.+|++|.+++
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 71 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAA---------G----GRAHAIAADLADPASV 71 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988777665554432 1 4689999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
.+++ +++|+||||+|.... +..++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 150 (250)
T PRK12939 72 QRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLRDSGRGRIVNLASDTALWGA- 150 (250)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEECchhhccCC-
Confidence 8776 468999999996432 1122344567899999999888753 345699999996653221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...|.+++ ..++++++|+||++.++....... ..............+++++|+|+++
T Consensus 151 -----~~~~~y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 225 (250)
T PRK12939 151 -----PKLGAYVASKGAVIGMTRSLARELGGRGITVNAIAPGLTATEATAYVPADERHAYYLKGRALERLQVPDDVAGAV 225 (250)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHHhhhCEEEEEEEECCCCCccccccCChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 223469999999998775 268999999999998774322111 0000011122234579999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.++.+.. ...|+++++.++.
T Consensus 226 ~~l~~~~~~~~~G~~i~~~gg~ 247 (250)
T PRK12939 226 LFLLSDAARFVTGQLLPVNGGF 247 (250)
T ss_pred HHHhCccccCccCcEEEECCCc
Confidence 99998643 2468888887764
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=4.8e-21 Score=184.74 Aligned_cols=215 Identities=16% Similarity=0.143 Sum_probs=153.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+. + .++.++.+|+.|.+++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~-----------~----~~~~~~~~D~~~~~~~ 73 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLP-----------G----AKVTATVADVADPAQV 73 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHh-----------c----CceEEEEccCCCHHHH
Confidence 456899999999999999999999999999999998776555433221 0 2578999999999988
Q ss_pred HHHh-------cCCCEEEEcccCC-CC------ccCCCCCcccchHHHHHHHHHHHH----hCCC-CEEEEEccccccCC
Q 013273 158 EPAL-------GNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~-~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v-~r~V~vSS~~~~~~ 218 (446)
.+++ .++|+|||++|.. .. ...++...+++|+.++.++++++. ..+. ++||++||.....
T Consensus 74 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~vv~~ss~~~~~- 152 (264)
T PRK12829 74 ERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKASGHGGVIIALSSVAGRL- 152 (264)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCeEEEEeccccccc-
Confidence 7766 4789999999965 21 112335567899999999888873 3344 5788888765422
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc-----cceeec------ccCcccC
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HNITLS------QEDTLFG 280 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~-----~~~~~~------~~~~~~~ 280 (446)
+. .....|+.+|...|.+++. .++++++||||+++++....... ...... ......+
T Consensus 153 ~~-----~~~~~y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (264)
T PRK12829 153 GY-----PGRTPYAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQEYLEKISLG 227 (264)
T ss_pred CC-----CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHHHHHhcCCCC
Confidence 11 2344699999999887652 58999999999999985321100 000000 0011123
Q ss_pred CccCHHHHHHHHHHHHhCC-CCCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKNR-SLSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~-~~~~~~v~ni~~~~ 313 (446)
.+++++|+|++++.++... ....++.|++.++.
T Consensus 228 ~~~~~~d~a~~~~~l~~~~~~~~~g~~~~i~~g~ 261 (264)
T PRK12829 228 RMVEPEDIAATALFLASPAARYITGQAISVDGNV 261 (264)
T ss_pred CCCCHHHHHHHHHHHcCccccCccCcEEEeCCCc
Confidence 5799999999999988643 22468899998875
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-21 Score=183.01 Aligned_cols=216 Identities=13% Similarity=0.109 Sum_probs=155.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||+++++.|+++|++|++++|+....+.+..++... + .++.++.+|++|.+++
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 69 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDL---------G----RRALAVPTDITDEDQC 69 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh---------C----CceEEEecCCCCHHHH
Confidence 35679999999999999999999999999999999987766665544321 1 4689999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~ 220 (446)
+.++ +++|+||||||.... +..++...+++|+.++..+++++.+. ..++||++||......
T Consensus 70 ~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~-- 147 (258)
T PRK07890 70 ANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAESGGSIVMINSMVLRHS-- 147 (258)
T ss_pred HHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCEEEEEechhhccC--
Confidence 7665 468999999985321 22334556889999999999998642 2359999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccc-ccc----c----ceeec--ccCcccCCc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KET----H----NITLS--QEDTLFGGQ 282 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~-~~~----~----~~~~~--~~~~~~~~~ 282 (446)
......|+.+|...+.+++. .|+++++||||.++++.... ... . ..... ......+.+
T Consensus 148 ----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (258)
T PRK07890 148 ----QPKYGAYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAANSDLKRL 223 (258)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhhcCCcccc
Confidence 23455799999999987762 58999999999999985311 000 0 00000 011123456
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++|+|+++++++.+.. ...++++.+.++
T Consensus 224 ~~~~dva~a~~~l~~~~~~~~~G~~i~~~gg 254 (258)
T PRK07890 224 PTDDEVASAVLFLASDLARAITGQTLDVNCG 254 (258)
T ss_pred CCHHHHHHHHHHHcCHhhhCccCcEEEeCCc
Confidence 789999999999997532 234666665554
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=8.2e-21 Score=183.10 Aligned_cols=214 Identities=19% Similarity=0.160 Sum_probs=148.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+||||+++++.|+++|++|++++|+.. ...+.+++... + .++.++.+|++|.+++
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~-~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 71 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSEL-VHEVAAELRAA---------G----GEALALTADLETYAGA 71 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchH-HHHHHHHHHhc---------C----CeEEEEEEeCCCHHHH
Confidence 45689999999999999999999999999999999853 33333333221 1 4688899999998887
Q ss_pred HHHh-------cCCCEEEEcccCCC--C-----ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASE--K-----EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~--~-----~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
.+++ +++|+||||||... . +..++...+++|+.++..+++.+ ++.+.++||++||......
T Consensus 72 ~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~- 150 (260)
T PRK12823 72 QAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQGGGAIVNVSSIATRGI- 150 (260)
T ss_pred HHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEcCccccCC-
Confidence 7665 36899999998431 1 12223445678888887665555 4556679999999765321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccc-------cccceee------cccCccc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-------ETHNITL------SQEDTLF 279 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~-------~~~~~~~------~~~~~~~ 279 (446)
....|+.+|...+.+++. .|+++++|+||+++++..... ....... .......
T Consensus 151 -------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T PRK12823 151 -------NRVPYSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAPPRRVPRNAAPQSEQEKAWYQQIVDQTLDSSLM 223 (260)
T ss_pred -------CCCccHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCcchhhHHhhccccccccccHHHHHHHHhccCCc
Confidence 224699999999987652 589999999999999731100 0000000 0011223
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+.+++|+|+++++++.+.. ...+++|++.+++
T Consensus 224 ~~~~~~~dva~~~~~l~s~~~~~~~g~~~~v~gg~ 258 (260)
T PRK12823 224 KRYGTIDEQVAAILFLASDEASYITGTVLPVGGGD 258 (260)
T ss_pred ccCCCHHHHHHHHHHHcCcccccccCcEEeecCCC
Confidence 345789999999999997653 2357888887654
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=9.8e-21 Score=182.27 Aligned_cols=214 Identities=13% Similarity=0.159 Sum_probs=152.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++++|+||||+|+||+++++.|+++|++|++++|+..+...+.+.+ + .++.++.+|++|.++
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------------~----~~~~~~~~Dl~~~~~ 70 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKAL------------G----ENAWFIAMDVADEAQ 70 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHc------------C----CceEEEEccCCCHHH
Confidence 456789999999999999999999999999999999876655432211 1 468899999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +.+|+||||||.... +..+++..+++|+.++.++++++.. ...++||++||......
T Consensus 71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~ii~~sS~~~~~~ 150 (255)
T PRK05717 71 VAAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLRAHNGAIVNLASTRARQS 150 (255)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCcEEEEEcchhhcCC
Confidence 76654 458999999996432 1223446688999999999999963 22368999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
. .....|+.+|...|.+++. .++++++|+||++.++.......... .........+...+++|+|++
T Consensus 151 ~------~~~~~Y~~sKaa~~~~~~~la~~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 224 (255)
T PRK05717 151 E------PDTEAYAASKGGLLALTHALAISLGPEIRVNAVSPGWIDARDPSQRRAEPLSEADHAQHPAGRVGTVEDVAAM 224 (255)
T ss_pred C------CCCcchHHHHHHHHHHHHHHHHHhcCCCEEEEEecccCcCCccccccchHHHHHHhhcCCCCCCcCHHHHHHH
Confidence 1 2235699999999988762 35899999999999874221100000 000111223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...++++.+.++
T Consensus 225 ~~~l~~~~~~~~~g~~~~~~gg 246 (255)
T PRK05717 225 VAWLLSRQAGFVTGQEFVVDGG 246 (255)
T ss_pred HHHHcCchhcCccCcEEEECCC
Confidence 999987543 235777777554
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=179.30 Aligned_cols=214 Identities=14% Similarity=0.116 Sum_probs=151.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc----hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~----~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+++|+++||||+|+||+++++.|+++|++|++++|.. +....+.+++... ..++.++.+|+.|
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~ 70 (249)
T PRK12827 4 LDSRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAA-------------GGKALGLAFDVRD 70 (249)
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhc-------------CCcEEEEEccCCC
Confidence 3467999999999999999999999999999977643 3333333222211 1578999999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccc
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGT 215 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~ 215 (446)
.+++++++ .++|+||||+|.... +..++...+++|+.++.++++++. +.+.++||++||.+.
T Consensus 71 ~~~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~ 150 (249)
T PRK12827 71 FAATRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIRARRGGRIVNIASVAG 150 (249)
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCCeEEEEECCchh
Confidence 99888776 468999999996432 122334567899999999999987 456679999999766
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.... .....|+.+|...+.+++ ..|++++++|||+++++........... ........+.+++|+
T Consensus 151 ~~~~------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~--~~~~~~~~~~~~~~v 222 (249)
T PRK12827 151 VRGN------RGQVNYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMADNAAPTEHL--LNPVPVQRLGEPDEV 222 (249)
T ss_pred cCCC------CCCchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcccccchHHHH--HhhCCCcCCcCHHHH
Confidence 3321 334579999998887655 2589999999999998843211110000 011112234689999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+++++++.+.. ...++++++.++
T Consensus 223 a~~~~~l~~~~~~~~~g~~~~~~~g 247 (249)
T PRK12827 223 AALVAFLVSDAASYVTGQVIPVDGG 247 (249)
T ss_pred HHHHHHHcCcccCCccCcEEEeCCC
Confidence 999999997643 235788888665
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.2e-20 Score=180.60 Aligned_cols=215 Identities=15% Similarity=0.085 Sum_probs=153.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++++||||+|+||++|++.|+++|++|++++|+.+......+.+. ...++.++++|++|.+++
T Consensus 3 ~~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~D~~~~~~~ 68 (252)
T PRK06138 3 LAGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIA--------------AGGRAFARQGDVGSAEAV 68 (252)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHh--------------cCCeEEEEEcCCCCHHHH
Confidence 356799999999999999999999999999999999876655444332 014689999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||+|.... +..++...+++|+.++.++.+++ ++.+.++||++||.......
T Consensus 69 ~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~- 147 (252)
T PRK06138 69 EALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQRQGGGSIVNTASQLALAGG- 147 (252)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHHhcCCeEEEEECChhhccCC-
Confidence 87763 68999999996432 12223445788999987776665 45677899999997653211
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccce-----e-ecccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-----T-LSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~-----~-~~~~~~~~~~~v~~~D 287 (446)
.....|+.+|...+.+++. .|++++++|||+++++.......... . ..........+++++|
T Consensus 148 -----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 222 (252)
T PRK06138 148 -----RGRAAYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYFRRIFARHADPEALREALRARHPMNRFGTAEE 222 (252)
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcchhhhhccccChHHHHHHHHhcCCCCCCcCHHH
Confidence 2345699999998877652 48999999999999884321110000 0 0001122334789999
Q ss_pred HHHHHHHHHhCCCC-CCCcEEEEecC
Q 013273 288 VAELLACMAKNRSL-SYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~~-~~~~v~ni~~~ 312 (446)
+|++++.++.++.. ..|.++.+.++
T Consensus 223 ~a~~~~~l~~~~~~~~~g~~~~~~~g 248 (252)
T PRK06138 223 VAQAALFLASDESSFATGTTLVVDGG 248 (252)
T ss_pred HHHHHHHHcCchhcCccCCEEEECCC
Confidence 99999999987542 24566666544
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-20 Score=179.00 Aligned_cols=217 Identities=15% Similarity=0.149 Sum_probs=153.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+..++++|||||+|+||+++++.|+++|++|+++.|. .+....+.+.++.. + .++.++.+|++|.+
T Consensus 6 ~~~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~d~~ 72 (258)
T PRK09134 6 MAAPRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRAL---------G----RRAVALQADLADEA 72 (258)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHH
Confidence 3456799999999999999999999999999888775 34444444433221 1 56889999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~~ 218 (446)
++.+++ +++|+||||||.... ...+++..+++|+.++.++++++... +.+++|+++|.....+
T Consensus 73 ~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~~s~~~~~~ 152 (258)
T PRK09134 73 EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARALPADARGLVVNMIDQRVWNL 152 (258)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCceEEEECchhhcCC
Confidence 888776 358999999986432 22234556889999999999988643 3458999888644221
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
. ..+..|+.+|..+|.+.+. .++++++++||++++...... ..+.........+...+++|+|+++
T Consensus 153 ~------p~~~~Y~~sK~a~~~~~~~la~~~~~~i~v~~i~PG~v~t~~~~~~--~~~~~~~~~~~~~~~~~~~d~a~~~ 224 (258)
T PRK09134 153 N------PDFLSYTLSKAALWTATRTLAQALAPRIRVNAIGPGPTLPSGRQSP--EDFARQHAATPLGRGSTPEEIAAAV 224 (258)
T ss_pred C------CCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEeecccccCCcccCh--HHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 1 2234799999998877652 248999999999976532110 0000001112234568899999999
Q ss_pred HHHHhCCCCCCCcEEEEecCCCC
Q 013273 293 ACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 293 ~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+.+++++. ..+++|++.++...
T Consensus 225 ~~~~~~~~-~~g~~~~i~gg~~~ 246 (258)
T PRK09134 225 RYLLDAPS-VTGQMIAVDGGQHL 246 (258)
T ss_pred HHHhcCCC-cCCCEEEECCCeec
Confidence 99998765 56788888777543
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.6e-20 Score=180.60 Aligned_cols=217 Identities=12% Similarity=0.134 Sum_probs=155.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|+.|.+++
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 70 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAE---------G----GEAVALAGDVRDEAYA 70 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHHH
Confidence 45679999999999999999999999999999999988777766555432 1 4688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..++...+++|+.+..++++++ ++.+.++||++||......+
T Consensus 71 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~~~~~iv~~sS~~~~~~~ 150 (254)
T PRK07478 71 KALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLARGGGSLIFTSTFVGHTAG 150 (254)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEechHhhccC
Confidence 87763 68999999996421 11234566889998888776655 44566799999997653221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~ 290 (446)
...+..|+.+|+..+.+.+ ..|+++++|+||++.++...... .... .........+....++|+|+
T Consensus 151 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 225 (254)
T PRK07478 151 -----FPGMAAYAASKAGLIGLTQVLAAEYGAQGIRVNALLPGGTDTPMGRAMGDTPEALAFVAGLHALKRMAQPEEIAQ 225 (254)
T ss_pred -----CCCcchhHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCcccCcccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1234579999999987765 25899999999999877321110 0000 00011112345678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.+.. ...|+++.+.++
T Consensus 226 ~~~~l~s~~~~~~~G~~~~~dgg 248 (254)
T PRK07478 226 AALFLASDAASFVTGTALLVDGG 248 (254)
T ss_pred HHHHHcCchhcCCCCCeEEeCCc
Confidence 9999997643 345777777554
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.5e-20 Score=181.11 Aligned_cols=217 Identities=13% Similarity=0.104 Sum_probs=153.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||+++++.|+++|++|++++|+..+.+.+.+.+... ....++.++.+|++|.+++..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~i~~ 70 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAE-----------YGEGMAYGFGADATSEQSVLA 70 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----------cCCceeEEEEccCCCHHHHHH
Confidence 468999999999999999999999999999999987766655444321 001368999999999888876
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCc
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~ 221 (446)
++ +.+|+||||||.... ...++...+++|+.++.++++++.+ .+ -++||++||..... +.
T Consensus 71 ~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~~~~~-~~- 148 (259)
T PRK12384 71 LSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSKSGKV-GS- 148 (259)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCccccc-CC-
Confidence 65 468999999985432 2223455678999998888777754 44 35999999965422 11
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc------ce------eecccCcccCCc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH------NI------TLSQEDTLFGGQ 282 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~------~~------~~~~~~~~~~~~ 282 (446)
.....|+.+|+..+.+++ ..|+++++||||+++++........ .+ .........+.+
T Consensus 149 ----~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (259)
T PRK12384 149 ----KHNSGYSAAKFGGVGLTQSLALDLAEYGITVHSLMLGNLLKSPMFQSLLPQYAKKLGIKPDEVEQYYIDKVPLKRG 224 (259)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCcccchhhhhhhHHHHHhcCCChHHHHHHHHHhCcccCC
Confidence 223469999999876654 3799999999999886542110000 00 000112234567
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|++++++.++.+.. ...|++|++.++.
T Consensus 225 ~~~~dv~~~~~~l~~~~~~~~~G~~~~v~~g~ 256 (259)
T PRK12384 225 CDYQDVLNMLLFYASPKASYCTGQSINVTGGQ 256 (259)
T ss_pred CCHHHHHHHHHHHcCcccccccCceEEEcCCE
Confidence 899999999999987653 2357899998875
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2e-20 Score=181.00 Aligned_cols=213 Identities=16% Similarity=0.155 Sum_probs=153.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|+.|.+++
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dl~~~~~~ 67 (261)
T PRK08265 4 LAGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASL------------G----ERARFIATDITDDAAI 67 (261)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CeeEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999987665543321 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++++ +.+|+||||||.... ...++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 68 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~--- 144 (261)
T PRK08265 68 ERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLARGGGAIVNFTSISAKFAQ--- 144 (261)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCCcEEEEECchhhccCC---
Confidence 7776 468999999996321 2233455678899999999888754 344699999997653221
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccc-e--eecccCcccCCccCHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHN-I--TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~-~--~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++.... ..... . .+.......+....++|+|++
T Consensus 145 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~~~t~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~ 221 (261)
T PRK08265 145 ---TGRWLYPASKAAIRQLTRSMAMDLAPDGIRVNSVSPGWTWSRVMDELSGGDRAKADRVAAPFHLLGRVGDPEEVAQV 221 (261)
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHhcccCEEEEEEccCCccChhhhhhcccchhHHHHhhcccCCCCCccCHHHHHHH
Confidence 234579999999987765 268999999999998763211 00000 0 000111223456789999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...++++.+.++
T Consensus 222 ~~~l~s~~~~~~tG~~i~vdgg 243 (261)
T PRK08265 222 VAFLCSDAASFVTGADYAVDGG 243 (261)
T ss_pred HHHHcCccccCccCcEEEECCC
Confidence 999997643 246777777665
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=180.84 Aligned_cols=195 Identities=18% Similarity=0.175 Sum_probs=143.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|+||||+|+||++++++|+++|++|++++|+.++... ..+++++++|++|.++++
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~---------------------~~~~~~~~~D~~d~~~~~ 61 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAP---------------------IPGVELLELDVTDDASVQ 61 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc---------------------cCCCeeEEeecCCHHHHH
Confidence 45789999999999999999999999999999998754321 156889999999999988
Q ss_pred HHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ .+|+||||||..... ..++...+++|+.++.++++++ ++.+.++||++||......
T Consensus 62 ~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--- 138 (270)
T PRK06179 62 AAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMRAQGSGRIINISSVLGFLP--- 138 (270)
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEECCccccCC---
Confidence 8874 579999999964321 2234556889999999988885 5567889999999765322
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecc-----------cCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ-----------EDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~-----------~~~~~~~~v 283 (446)
......|+.+|...|.+++ ..|+++++|+||++.++...........+.. .........
T Consensus 139 ---~~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (270)
T PRK06179 139 ---APYMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFDANAPEPDSPLAEYDRERAVVSKAVAKAVKKAD 215 (270)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccccccCCCCCcchhhHHHHHHHHHHHHhccccCC
Confidence 1224579999999987754 3699999999999988743211100000000 001123457
Q ss_pred CHHHHHHHHHHHHhCCC
Q 013273 284 SNLQVAELLACMAKNRS 300 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~ 300 (446)
.++|+|+.++.++..+.
T Consensus 216 ~~~~va~~~~~~~~~~~ 232 (270)
T PRK06179 216 APEVVADTVVKAALGPW 232 (270)
T ss_pred CHHHHHHHHHHHHcCCC
Confidence 88999999999998764
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.1e-20 Score=180.17 Aligned_cols=211 Identities=15% Similarity=0.098 Sum_probs=153.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.++...+.+. .++.++.+|++|.+++
T Consensus 7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v 68 (245)
T PRK07060 7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGE------------------TGCEPLRLDVGDDAAI 68 (245)
T ss_pred cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------------------hCCeEEEecCCCHHHH
Confidence 4567999999999999999999999999999999998765544321 2366788999999888
Q ss_pred HHHhc---CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCCCchh
Q 013273 158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~~---~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~~~~~ 223 (446)
.+++. ++|+||||+|.... ...+++..+++|+.++.++++++.+. + .++||++||.......
T Consensus 69 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 144 (245)
T PRK07060 69 RAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL---- 144 (245)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC----
Confidence 88774 58999999996432 12234455778999999999888642 2 3699999997653321
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc--ccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~--~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|..+|.+++ ..|++++.+|||+++++.... ...............+.+++++|+|++++.
T Consensus 145 --~~~~~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~~ 222 (245)
T PRK07060 145 --PDHLAYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMAAEAWSDPQKSGPMLAAIPLGRFAEVDDVAAPILF 222 (245)
T ss_pred --CCCcHhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchhhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 234579999999998765 258999999999999885321 100000000011223568999999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
++.++. ...|+++++.++
T Consensus 223 l~~~~~~~~~G~~~~~~~g 241 (245)
T PRK07060 223 LLSDAASMVSGVSLPVDGG 241 (245)
T ss_pred HcCcccCCccCcEEeECCC
Confidence 998654 235788887665
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=177.42 Aligned_cols=217 Identities=17% Similarity=0.142 Sum_probs=151.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||+++++.|+++|++|+++.|+... ...+.+.++.. ..++.++.+|+.|.++
T Consensus 3 ~~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~ 69 (248)
T PRK05557 3 LEGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGAL-------------GGKALAVQGDVSDAES 69 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc-------------CCceEEEEcCCCCHHH
Confidence 456799999999999999999999999999898887653 33333332211 1578899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+.++++ ++|+||||+|...... .+++..+++|+.++.++++++.. .+.++||++||..... +
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~iss~~~~~-~ 148 (248)
T PRK05557 70 VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMMKQRSGRIINISSVVGLM-G 148 (248)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEEcccccCc-C
Confidence 877764 6899999998643221 12334467899999999888864 3567899999974422 2
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
. .....|+.+|...|.+++ ..++++++++||++.++...................+.+++++|+|+++
T Consensus 149 ~-----~~~~~y~~sk~a~~~~~~~~a~~~~~~~i~~~~v~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 223 (248)
T PRK05557 149 N-----PGQANYAASKAGVIGFTKSLARELASRGITVNAVAPGFIETDMTDALPEDVKEAILAQIPLGRLGQPEEIASAV 223 (248)
T ss_pred C-----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccCCccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 1 234569999998886654 3689999999999876532111000000001112234568999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++.+.. ...+++|+|.++.
T Consensus 224 ~~l~~~~~~~~~g~~~~i~~~~ 245 (248)
T PRK05557 224 AFLASDEAAYITGQTLHVNGGM 245 (248)
T ss_pred HHHcCcccCCccccEEEecCCc
Confidence 99887632 2467899997663
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.5e-20 Score=179.09 Aligned_cols=216 Identities=17% Similarity=0.130 Sum_probs=152.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++|+||||+|+||+++++.|+++|++|++++|+.. ......+.++.. ..++.++.+|++|.+++.
T Consensus 2 ~k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~ 68 (256)
T PRK12745 2 RPVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRAL-------------GVEVIFFPADVADLSAHE 68 (256)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhc-------------CCceEEEEecCCCHHHHH
Confidence 368999999999999999999999999999998753 333333322211 146899999999988877
Q ss_pred HHh-------cCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHhC-----C-----CCEEEEEccc
Q 013273 159 PAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA-----K-----VNHFIMVSSL 213 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~~-----~-----v~r~V~vSS~ 213 (446)
+++ +.+|+||||||.... ...+++..+++|+.++.++++++.+. + .++||++||.
T Consensus 69 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 148 (256)
T PRK12745 69 AMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSV 148 (256)
T ss_pred HHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECCh
Confidence 765 468999999986321 11234455789999999998887532 1 5689999997
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCH
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~ 285 (446)
.+.... .....|+.+|..+|.+++ .+|+++++||||.++++...... .....+.......+.+.++
T Consensus 149 ~~~~~~------~~~~~Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T PRK12745 149 NAIMVS------PNRGEYCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAPVTAKYDALIAKGLVPMPRWGEP 222 (256)
T ss_pred hhccCC------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccccccchhHHhhhhhcCCCcCCCcCH
Confidence 663322 234569999999987765 37899999999999987432110 0000011111223457799
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
.|+|+++..++.... ...+++|++.++..
T Consensus 223 ~d~a~~i~~l~~~~~~~~~G~~~~i~gg~~ 252 (256)
T PRK12745 223 EDVARAVAALASGDLPYSTGQAIHVDGGLS 252 (256)
T ss_pred HHHHHHHHHHhCCcccccCCCEEEECCCee
Confidence 999999999887542 23578999987643
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.8e-20 Score=178.15 Aligned_cols=217 Identities=16% Similarity=0.096 Sum_probs=153.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+||||++++++|+++|++|++..|+. .........++.. + .++.++.+|++|.++
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 70 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKEN---------G----GEGIGVLADVSTREG 70 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHc---------C----CeeEEEEeccCCHHH
Confidence 3467999999999999999999999999998877653 3333322222211 1 357788999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc
Q 013273 157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~ 221 (446)
+..++ .++|+||||||..... ..+++..+++|+.+..++++++.+. ..++||++||..+...
T Consensus 71 ~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~--- 147 (252)
T PRK06077 71 CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAGIRP--- 147 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhccCC---
Confidence 77765 4689999999963221 1112345788999999999888753 2358999999766332
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccc-cce---eecccCcccCCccCHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-HNI---TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~-~~~---~~~~~~~~~~~~v~~~DvA~a 291 (446)
..++..|+.+|..+|.+++. .++++++++||++.++....... ... .........+.+++++|+|++
T Consensus 148 ---~~~~~~Y~~sK~~~~~~~~~l~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 224 (252)
T PRK06077 148 ---AYGLSIYGAMKAAVINLTKYLALELAPKIRVNAIAPGFVKTKLGESLFKVLGMSEKEFAEKFTLMGKILDPEEVAEF 224 (252)
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhcCCEEEEEeeCCccChHHHhhhhcccccHHHHHHhcCcCCCCCCHHHHHHH
Confidence 24566899999999988762 37999999999998774211000 000 000111234567999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~ 314 (446)
+++++.... ..+++|++.++..
T Consensus 225 ~~~~~~~~~-~~g~~~~i~~g~~ 246 (252)
T PRK06077 225 VAAILKIES-ITGQVFVLDSGES 246 (252)
T ss_pred HHHHhCccc-cCCCeEEecCCee
Confidence 999997654 5688999988753
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=4.6e-20 Score=175.67 Aligned_cols=197 Identities=14% Similarity=0.115 Sum_probs=148.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||++++++|+++|++|++++|+..+..++.+.++.. + .++.++.+|++|.+++
T Consensus 5 ~~~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 71 (239)
T PRK07666 5 LQGKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAY---------G----VKVVIATADVSDYEEV 71 (239)
T ss_pred CCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------C----CeEEEEECCCCCHHHH
Confidence 34578999999999999999999999999999999987766655544321 1 4789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
.++++ ++|+||||+|.... ...+++..+++|+.++.++++++. +.+.+++|++||.......
T Consensus 72 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~ss~~~~~~~- 150 (239)
T PRK07666 72 TAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMIERQSGDIINISSTAGQKGA- 150 (239)
T ss_pred HHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEEcchhhccCC-
Confidence 87774 78999999986432 112334567899999999988875 3566799999997653322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+++ ..|+++++||||++.++..... .. ........+.++|+|++++
T Consensus 151 -----~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~v~pg~v~t~~~~~~---~~----~~~~~~~~~~~~~~a~~~~ 218 (239)
T PRK07666 151 -----AVTSAYSASKFGVLGLTESLMQEVRKHNIRVTALTPSTVATDMAVDL---GL----TDGNPDKVMQPEDLAEFIV 218 (239)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccCcchhhc---cc----cccCCCCCCCHHHHHHHHH
Confidence 234469999998887754 3699999999999988732110 00 0111235689999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
.++.++.
T Consensus 219 ~~l~~~~ 225 (239)
T PRK07666 219 AQLKLNK 225 (239)
T ss_pred HHHhCCC
Confidence 9998763
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=2.2e-20 Score=179.39 Aligned_cols=216 Identities=17% Similarity=0.151 Sum_probs=150.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++++||||+|+||+++++.|++.|++|+++. |+.++...+..++... + .++.++.+|+.|.++
T Consensus 2 ~~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 68 (252)
T PRK12747 2 LKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---------G----GSAFSIGANLESLHG 68 (252)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhc---------C----CceEEEecccCCHHH
Confidence 4568999999999999999999999999998875 5555555544443321 1 457788999999876
Q ss_pred HHHHh-----------c--CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 157 IEPAL-----------G--NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 157 ~~~a~-----------~--~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+..++ + ++|+||||||..... ..+++..+++|+.++..+++++.+. +.++||++||...
T Consensus 69 ~~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 69 VEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred HHHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 65433 1 689999999964221 1224556789999999999888653 2359999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce--eecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~--~~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|+.++.+++ ..|+++++|+||++.++.......... .........+.+.+++
T Consensus 149 ~~~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (252)
T PRK12747 149 RISL------PDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDMNAELLSDPMMKQYATTISAFNRLGEVE 222 (252)
T ss_pred ccCC------CCchhHHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCchhhhcccCHHHHHHHHhcCcccCCCCHH
Confidence 4321 234579999999997765 368999999999999874211000000 0000111234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+|+++++++.+.. ...|+++.+.++
T Consensus 223 dva~~~~~l~s~~~~~~~G~~i~vdgg 249 (252)
T PRK12747 223 DIADTAAFLASPDSRWVTGQLIDVSGG 249 (252)
T ss_pred HHHHHHHHHcCccccCcCCcEEEecCC
Confidence 99999999987543 245777777654
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.86 E-value=3.2e-20 Score=178.50 Aligned_cols=216 Identities=12% Similarity=0.078 Sum_probs=157.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||++++++|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 7 l~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~~ 73 (254)
T PRK08085 7 LAGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQE---------G----IKAHAAPFNVTHKQEV 73 (254)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---------C----CeEEEEecCCCCHHHH
Confidence 45789999999999999999999999999999999987777665554421 1 4678899999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||+|.... +..+++..+++|+.++.++++++.+ .+.++||++||......
T Consensus 74 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-- 151 (254)
T PRK08085 74 EAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMVKRQAGKIINICSMQSELG-- 151 (254)
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEccchhccC--
Confidence 8776 458999999996421 2234556788999999998887754 45679999999755322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce-eecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|...+.+++ ..|+++++|+||++.++........ .. .........+.+...+|+|++
T Consensus 152 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~~ 227 (254)
T PRK08085 152 ----RDTITPYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMTKALVEDEAFTAWLCKRTPAARWGDPQELIGA 227 (254)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcchhhhccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 1234579999999998876 2699999999999998743211100 00 000112223457889999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...++++.+.++
T Consensus 228 ~~~l~~~~~~~i~G~~i~~dgg 249 (254)
T PRK08085 228 AVFLSSKASDFVNGHLLFVDGG 249 (254)
T ss_pred HHHHhCccccCCcCCEEEECCC
Confidence 999998643 345677766554
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=175.02 Aligned_cols=207 Identities=14% Similarity=0.124 Sum_probs=152.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||++++++|+++|++|++++|++.+...+.+.+... .+++++.+|+.|.+++
T Consensus 4 ~~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~~ 69 (237)
T PRK07326 4 LKGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNK--------------GNVLGLAADVRDEADV 69 (237)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhcc--------------CcEEEEEccCCCHHHH
Confidence 34579999999999999999999999999999999987766655444311 4688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCc
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~~ 221 (446)
.++++ ++|+||||+|.... ...++...+++|+.++.++++++.+ .+.++||++||......
T Consensus 70 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~--- 146 (237)
T PRK07326 70 QRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPALKRGGGYIINISSLAGTNF--- 146 (237)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHHCCeEEEEECChhhccC---
Confidence 77664 78999999986432 1222345578899999999888764 35568999999765322
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|..+|+..+.+.+ ..|+++++||||++.++...... .......+..+|+|++++.
T Consensus 147 ---~~~~~~y~~sk~a~~~~~~~~~~~~~~~gi~v~~v~pg~~~t~~~~~~~---------~~~~~~~~~~~d~a~~~~~ 214 (237)
T PRK07326 147 ---FAGGAAYNASKFGLVGFSEAAMLDLRQYGIKVSTIMPGSVATHFNGHTP---------SEKDAWKIQPEDIAQLVLD 214 (237)
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeccccCccccccc---------chhhhccCCHHHHHHHHHH
Confidence 1234569999998776654 36999999999999876321100 0001124899999999999
Q ss_pred HHhCCCCCCCcEEEEecCC
Q 013273 295 MAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~ 313 (446)
++..+.......+++..+.
T Consensus 215 ~l~~~~~~~~~~~~~~~~~ 233 (237)
T PRK07326 215 LLKMPPRTLPSKIEVRPSR 233 (237)
T ss_pred HHhCCccccccceEEecCC
Confidence 9998775566666665443
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.3e-20 Score=180.06 Aligned_cols=220 Identities=15% Similarity=0.073 Sum_probs=155.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++.. ..++.++.+|++|.+++
T Consensus 10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~-------------~~~~~~~~~Dl~d~~~i 76 (259)
T PRK08213 10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEAL-------------GIDALWIAADVADEADI 76 (259)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc-------------CCeEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999987766655444321 14688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~~~ 219 (446)
++++ .++|+||||||.... ...++...+++|+.++.++++++.+. +.++||++||.......
T Consensus 77 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~~~~~~~~v~~sS~~~~~~~ 156 (259)
T PRK08213 77 ERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMIPRGYGRIINVASVAGLGGN 156 (259)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHHhcCCeEEEEECChhhccCC
Confidence 7655 368999999986321 11223445779999999999987543 66799999997553221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.+ ...+...|..+|+..|.+++. .|+++++++||++.++.....................+...+|+|+++
T Consensus 157 ~~--~~~~~~~Y~~sKa~~~~~~~~~a~~~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 234 (259)
T PRK08213 157 PP--EVMDTIAYNTSKGAVINFTRALAAEWGPHGIRVNAIAPGFFPTKMTRGTLERLGEDLLAHTPLGRLGDDEDLKGAA 234 (259)
T ss_pred Cc--cccCcchHHHHHHHHHHHHHHHHHHhcccCEEEEEEecCcCCCcchhhhhHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 11 112346799999999988762 589999999999987642110000000000111123356789999999
Q ss_pred HHHHhCCC-CCCCcEEEEecC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++.... ...|+++++.++
T Consensus 235 ~~l~~~~~~~~~G~~~~~~~~ 255 (259)
T PRK08213 235 LLLASDASKHITGQILAVDGG 255 (259)
T ss_pred HHHhCccccCccCCEEEECCC
Confidence 99987643 346788877665
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-20 Score=180.93 Aligned_cols=219 Identities=14% Similarity=0.138 Sum_probs=157.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++...+.+.+... ...++.++.+|++|.+++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~~~i 73 (263)
T PRK08339 6 LSGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSE------------SNVDVSYIVADLTKREDL 73 (263)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777666555432 014688999999999988
Q ss_pred HHHh------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCc
Q 013273 158 EPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +++|++|||||.... +..+++..+++|+.+...+++++ ++.+.++||++||......
T Consensus 74 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~~~~--- 150 (263)
T PRK08339 74 ERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAIKEP--- 150 (263)
T ss_pred HHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccccCC---
Confidence 8776 368999999986321 23445667889988877776665 3456679999999875332
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----------cce-eecccCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----------HNI-TLSQEDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----------~~~-~~~~~~~~~~~~v 283 (446)
......|..+|...+.+.+ .+|++++.|.||++.++....... ... .........+.+.
T Consensus 151 ---~~~~~~y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 227 (263)
T PRK08339 151 ---IPNIALSNVVRISMAGLVRTLAKELGPKGITVNGIMPGIIRTDRVIQLAQDRAKREGKSVEEALQEYAKPIPLGRLG 227 (263)
T ss_pred ---CCcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccHHHHHHHHhhhhccCCCHHHHHHHHhccCCcccCc
Confidence 1224469999999887765 378999999999998763110000 000 0001112234578
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
.++|+|+++++++.+.. ...++++.+.++..
T Consensus 228 ~p~dva~~v~fL~s~~~~~itG~~~~vdgG~~ 259 (263)
T PRK08339 228 EPEEIGYLVAFLASDLGSYINGAMIPVDGGRL 259 (263)
T ss_pred CHHHHHHHHHHHhcchhcCccCceEEECCCcc
Confidence 89999999999997643 34677787766543
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.5e-20 Score=179.47 Aligned_cols=217 Identities=16% Similarity=0.144 Sum_probs=156.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++++|||||+||||+++++.|+++|++|++++|+.++...+.+.++.. + .++.++.+|++|.+++
T Consensus 8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~~ 74 (263)
T PRK07814 8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAA---------G----RRAHVVAADLAHPEAT 74 (263)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999987766665544321 1 5688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~ 219 (446)
.+++ +++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||......
T Consensus 75 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~~~~~~- 153 (263)
T PRK07814 75 AGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISSTMGRLA- 153 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccccccCC-
Confidence 7765 368999999985321 2233455688999999999999864 45679999999765332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccc-cccee-ecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNIT-LSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~-~~~~~-~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|..++.+++. .+++++.|+||++.++...... ...+. .............++|+|++
T Consensus 154 -----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 228 (263)
T PRK07814 154 -----GRGFAAYGTAKAALAHYTRLAALDLCPRIRVNAIAPGSILTSALEVVAANDELRAPMEKATPLRRLGDPEDIAAA 228 (263)
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHHCCCceEEEEEeCCCcCchhhhccCCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 13455799999999988762 3689999999999766321110 00000 00011122345689999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...++.+.+.++.
T Consensus 229 ~~~l~~~~~~~~~g~~~~~~~~~ 251 (263)
T PRK07814 229 AVYLASPAGSYLTGKTLEVDGGL 251 (263)
T ss_pred HHHHcCccccCcCCCEEEECCCc
Confidence 999997642 2467777776553
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-20 Score=179.60 Aligned_cols=191 Identities=15% Similarity=0.054 Sum_probs=142.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+ .++.++.+|++|.+++
T Consensus 3 ~~~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~ 65 (273)
T PRK07825 3 LRGKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAEL-----------------GLVVGGPLDVTDPASF 65 (273)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------------ccceEEEccCCCHHHH
Confidence 34679999999999999999999999999999999987765543321 2578899999999887
Q ss_pred HHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||.+....
T Consensus 66 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-- 143 (273)
T PRK07825 66 AAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMVPRGRGHVVNVASLAGKIP-- 143 (273)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEEcCccccCC--
Confidence 6655 4689999999964321 12234457889999888777664 557789999999865332
Q ss_pred chhhhchhhHHHHHHHHHHHHH-------HhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+. +..|+++++|+||++.++..... .......+++++|+|+.++
T Consensus 144 ----~~~~~~Y~asKaa~~~~~~~l~~el~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~~~va~~~~ 210 (273)
T PRK07825 144 ----VPGMATYCASKHAVVGFTDAARLELRGTGVHVSVVLPSFVNTELIAGT---------GGAKGFKNVEPEDVAAAIV 210 (273)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcCcchhhccc---------ccccCCCCCCHHHHHHHHH
Confidence 133557999998776543 34799999999999976521100 0111224689999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
.++.++.
T Consensus 211 ~~l~~~~ 217 (273)
T PRK07825 211 GTVAKPR 217 (273)
T ss_pred HHHhCCC
Confidence 9998765
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.1e-20 Score=179.06 Aligned_cols=213 Identities=14% Similarity=0.118 Sum_probs=149.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++++|+||||+|+||+++++.|+++|++|+++.|+ ..+...+...+ + .++.++.+|+.|.++
T Consensus 3 l~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~ 66 (253)
T PRK08642 3 ISEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADEL------------G----DRAIALQADVTDREQ 66 (253)
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHh------------C----CceEEEEcCCCCHHH
Confidence 456799999999999999999999999999887654 44333332211 1 468899999999988
Q ss_pred HHHHhc-------C-CCEEEEcccCCCC------------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcc
Q 013273 157 IEPALG-------N-ASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS 212 (446)
Q Consensus 157 ~~~a~~-------~-~D~VI~~Ag~~~~------------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS 212 (446)
+.+++. . +|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||
T Consensus 67 ~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~iss 146 (253)
T PRK08642 67 VQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMREQGFGRIINIGT 146 (253)
T ss_pred HHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHHhcCCeEEEEECC
Confidence 887763 3 8999999985310 111233458899999999999885 345679999998
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccc-eeecccCcccCCccC
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVS 284 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~~v~ 284 (446)
...... ..+...|+.+|...|.+++. .|++++.|+||++..+......... ..........+.+.+
T Consensus 147 ~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (253)
T PRK08642 147 NLFQNP------VVPYHDYTTAKAALLGLTRNLAAELGPYGITVNMVSGGLLRTTDASAATPDEVFDLIAATTPLRKVTT 220 (253)
T ss_pred ccccCC------CCCccchHHHHHHHHHHHHHHHHHhCccCeEEEEEeecccCCchhhccCCHHHHHHHHhcCCcCCCCC
Confidence 654221 23455799999999988762 6899999999999876321110000 000011222356789
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++|+|+++++++.+.. ...|+++.+.++
T Consensus 221 ~~~va~~~~~l~~~~~~~~~G~~~~vdgg 249 (253)
T PRK08642 221 PQEFADAVLFFASPWARAVTGQNLVVDGG 249 (253)
T ss_pred HHHHHHHHHHHcCchhcCccCCEEEeCCC
Confidence 9999999999998643 356778877655
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.3e-20 Score=173.90 Aligned_cols=202 Identities=16% Similarity=0.151 Sum_probs=143.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|++|||||+|+||+++++.|+++ ++|++++|+.++...+.+.. .+++++.+|+.|.+++++
T Consensus 3 ~~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~~~ 64 (227)
T PRK08219 3 RPTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAEL-----------------PGATPFPVDLTDPEAIAA 64 (227)
T ss_pred CCEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHh-----------------ccceEEecCCCCHHHHHH
Confidence 578999999999999999999999 99999999976655432211 358899999999999998
Q ss_pred Hhc---CCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHH----HHhCCCCEEEEEccccccCCCCchhhhc
Q 013273 160 ALG---NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDA----ATIAKVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 160 a~~---~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~a----a~~~~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
++. ++|+|||++|...... .++...+.+|+.+..++.+. +++. .+++|++||..+.... .
T Consensus 65 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~v~~ss~~~~~~~------~ 137 (227)
T PRK08219 65 AVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRAA-HGHVVFINSGAGLRAN------P 137 (227)
T ss_pred HHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCeEEEEcchHhcCcC------C
Confidence 885 5899999999643221 12334467788885555444 4444 4699999997653321 2
Q ss_pred hhhHHHHHHHHHHHHHHh-----CC-CCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 227 LFWGVLLWKRKAEEALIA-----SG-LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~-----~g-l~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
....|+.+|...|.+++. .+ ++++.++||.+.++........ .......+.+++++|+|++++.+++++.
T Consensus 138 ~~~~y~~~K~a~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~~~~~~----~~~~~~~~~~~~~~dva~~~~~~l~~~~ 213 (227)
T PRK08219 138 GWGSYAASKFALRALADALREEEPGNVRVTSVHPGRTDTDMQRGLVAQ----EGGEYDPERYLRPETVAKAVRFAVDAPP 213 (227)
T ss_pred CCchHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCccchHhhhhhhh----hccccCCCCCCCHHHHHHHHHHHHcCCC
Confidence 345799999998877652 34 9999999999877632111000 0011122457999999999999998764
Q ss_pred CCCCcEEEEecC
Q 013273 301 LSYCKVVEVIAE 312 (446)
Q Consensus 301 ~~~~~v~ni~~~ 312 (446)
.+.++|+.-.
T Consensus 214 --~~~~~~~~~~ 223 (227)
T PRK08219 214 --DAHITEVVVR 223 (227)
T ss_pred --CCccceEEEe
Confidence 4677777643
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3e-20 Score=179.28 Aligned_cols=219 Identities=14% Similarity=0.088 Sum_probs=157.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. ....++.++.+|++|.+++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~~ 73 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARD-----------VAGARVLAVPADVTDAASV 73 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-----------cCCceEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988777666555421 0115688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
.+++ +++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||......
T Consensus 74 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~-- 151 (260)
T PRK07063 74 AAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVERGRGSIVNIASTHAFKI-- 151 (260)
T ss_pred HHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhhCCeEEEEECChhhccC--
Confidence 8776 468999999995421 223455668899999999988875 345579999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc-c--c-e-eecccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET-H--N-I-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~-~--~-~-~~~~~~~~~~~~v~~~D 287 (446)
......|+.+|+..+.+.+ ..|++++.|+||++.++..... .. . . . .........+.+..++|
T Consensus 152 ----~~~~~~Y~~sKaa~~~~~~~la~el~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~ 227 (260)
T PRK07063 152 ----IPGCFPYPVAKHGLLGLTRALGIEYAARNVRVNAIAPGYIETQLTEDWWNAQPDPAAARAETLALQPMKRIGRPEE 227 (260)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccChhhhhhhhccCChHHHHHHHHhcCCCCCCCCHHH
Confidence 1234579999999998875 2589999999999977632100 00 0 0 0 00001122345678999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...|+++.+.++.
T Consensus 228 va~~~~fl~s~~~~~itG~~i~vdgg~ 254 (260)
T PRK07063 228 VAMTAVFLASDEAPFINATCITIDGGR 254 (260)
T ss_pred HHHHHHHHcCccccccCCcEEEECCCe
Confidence 9999999998643 3467777776553
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=182.20 Aligned_cols=217 Identities=17% Similarity=0.139 Sum_probs=153.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++++++|||||+|+||+++++.|+++|++|+++.|+.+ ..+.+.+.++.. + .++.++.+|++|.+
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~ 113 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEEC---------G----RKAVLLPGDLSDEK 113 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHc---------C----CeEEEEEccCCCHH
Confidence 45689999999999999999999999999999877542 333333322211 1 46888999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~ 219 (446)
++.+++ +++|++|||||... .+..++...+++|+.++.++++++... ..++||++||.......
T Consensus 114 ~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~~~~~ 193 (294)
T PRK07985 114 FARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQAYQPS 193 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchhccCC
Confidence 877665 56899999998531 123345667899999999999998653 22589999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+++ ..|+++++|+||+++++...... .... .........+.+..++|||+
T Consensus 194 ------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~ 267 (294)
T PRK07985 194 ------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELAP 267 (294)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCccccccccCCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence 224579999999987765 36999999999999988421100 0000 00011122345678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...++++.+.++.
T Consensus 268 ~~~fL~s~~~~~itG~~i~vdgG~ 291 (294)
T PRK07985 268 VYVYLASQESSYVTAEVHGVCGGE 291 (294)
T ss_pred HHHhhhChhcCCccccEEeeCCCe
Confidence 9999997643 3457788777653
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.4e-20 Score=179.83 Aligned_cols=191 Identities=14% Similarity=0.109 Sum_probs=142.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|+||||+|+||+++++.|+++|++|++++|+.++...+.+.+.. ..++.++.+|++|.+++.+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~i~~ 67 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPK--------------AARVSVYAADVRDADALAA 67 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccc--------------CCeeEEEEcCCCCHHHHHH
Confidence 46899999999999999999999999999999998766554432211 1278999999999998877
Q ss_pred Hhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHH----HHHhCCCCEEEEEccccccCCCCc
Q 013273 160 ALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVD----AATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~----aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++ .+|+||||+|.... +..++...+++|+.++.++++ .+++.+.++||++||.......
T Consensus 68 ~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~~~~~iv~isS~~~~~~~-- 145 (257)
T PRK07024 68 AAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAARRGTLVGIASVAGVRGL-- 145 (257)
T ss_pred HHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCCC--
Confidence 763 47999999996432 112344567899999999877 4455667899999997653221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|+..+.+++ ..|+++++||||++.++..... . ......+.++|+|+.++.
T Consensus 146 ----~~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~-------~~~~~~~~~~~~a~~~~~ 211 (257)
T PRK07024 146 ----PGAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPMTAHN---P-------YPMPFLMDADRFAARAAR 211 (257)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCchhhcC---C-------CCCCCccCHHHHHHHHHH
Confidence 234469999999987763 3699999999999998732110 0 001123789999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++.+..
T Consensus 212 ~l~~~~ 217 (257)
T PRK07024 212 AIARGR 217 (257)
T ss_pred HHhCCC
Confidence 998654
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.5e-20 Score=174.03 Aligned_cols=197 Identities=18% Similarity=0.167 Sum_probs=146.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++++||||+|+||+.++++|+++|++|++++|+.++...+.+.++.. + .++.++.+|++|.+++.
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~~ 71 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRST---------G----VKAAAYSIDLSNPEAIA 71 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhC---------C----CcEEEEEccCCCHHHHH
Confidence 4578999999999999999999999999999999987766665544321 1 56889999999998887
Q ss_pred HHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ ++|+||||+|.... +..++...+++|+.++.++++.+ ++.+.++||++||.......
T Consensus 72 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~-- 149 (241)
T PRK07454 72 PGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMRARGGGLIINVSSIAARNAF-- 149 (241)
T ss_pred HHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCcCC--
Confidence 7653 58999999996432 12234455788999988887776 34556799999998663321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...+.+.+ ..|+++++||||++.++.... .... ........+.++|+|+++++
T Consensus 150 ----~~~~~Y~~sK~~~~~~~~~~a~e~~~~gi~v~~i~pg~i~t~~~~~---~~~~---~~~~~~~~~~~~~va~~~~~ 219 (241)
T PRK07454 150 ----PQWGAYCVSKAALAAFTKCLAEEERSHGIRVCTITLGAVNTPLWDT---ETVQ---ADFDRSAMLSPEQVAQTILH 219 (241)
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCcccCCcccc---cccc---cccccccCCCHHHHHHHHHH
Confidence 234579999999887754 369999999999998774210 0000 00111346899999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++.++.
T Consensus 220 l~~~~~ 225 (241)
T PRK07454 220 LAQLPP 225 (241)
T ss_pred HHcCCc
Confidence 998775
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.4e-20 Score=205.48 Aligned_cols=209 Identities=13% Similarity=0.013 Sum_probs=151.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
...|+||||||+||||++|++.|.++|++|... .+|++|.+.+
T Consensus 378 ~~~mkiLVtGa~G~iG~~l~~~L~~~g~~v~~~-------------------------------------~~~l~d~~~v 420 (668)
T PLN02260 378 KPSLKFLIYGRTGWIGGLLGKLCEKQGIAYEYG-------------------------------------KGRLEDRSSL 420 (668)
T ss_pred CCCceEEEECCCchHHHHHHHHHHhCCCeEEee-------------------------------------ccccccHHHH
Confidence 455799999999999999999999999887311 1456777777
Q ss_pred HHHhc--CCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----------
Q 013273 158 EPALG--NASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----------- 219 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----------- 219 (446)
...+. ++|+|||||+.... ...++...+++|+.++.+|+++|++.++ ++|++||..+..++
T Consensus 421 ~~~i~~~~pd~Vih~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~ 499 (668)
T PLN02260 421 LADIRNVKPTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRENGL-LMMNFATGCIFEYDAKHPEGSGIGF 499 (668)
T ss_pred HHHHHhhCCCEEEECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHcCC-eEEEEcccceecCCcccccccCCCC
Confidence 77775 68999999986531 1235566789999999999999999998 56777776553321
Q ss_pred Cchhhhc-hhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC----cccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 220 FPAAILN-LFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT----DAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 220 ~~~~~~~-~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~----~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.+++... +.+.|+.+|+.+|.+++.+ .++.++|+.++|+.+ .++.... +.......+..+..+.+|++.+++.
T Consensus 500 ~E~~~~~~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~~~~~~nfv~~~-~~~~~~~~vp~~~~~~~~~~~~~~~ 577 (668)
T PLN02260 500 KEEDKPNFTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSDLSNPRNFITKI-SRYNKVVNIPNSMTVLDELLPISIE 577 (668)
T ss_pred CcCCCCCCCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccCCCCccHHHHHH-hccceeeccCCCceehhhHHHHHHH
Confidence 2222223 3478999999999999876 478889999998643 1221111 1111111123356777888888888
Q ss_pred HHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 295 MAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
+++... +++||++++..+++.++++.+.+..+
T Consensus 578 l~~~~~---~giyni~~~~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 578 MAKRNL---RGIWNFTNPGVVSHNEILEMYKDYID 609 (668)
T ss_pred HHHhCC---CceEEecCCCcCcHHHHHHHHHHhcC
Confidence 887533 68999999999999999999988764
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.2e-20 Score=177.63 Aligned_cols=217 Identities=16% Similarity=0.156 Sum_probs=156.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++.. + .++.++.+|++|.+++
T Consensus 7 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~~ 73 (253)
T PRK05867 7 LHGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTS---------G----GKVVPVCCDVSQHQQV 73 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---------C----CeEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988777666554432 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+ .+++|++||.......
T Consensus 74 ~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 153 (253)
T PRK05867 74 TSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASMSGHIIN 153 (253)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcHHhcCCC
Confidence 7765 478999999996432 1223445578999999999888753 22 3579999987543211
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.+ ..+..|+.+|...+.+.+ ..|+++++|+||++.++......... .........+.+..++|||+++
T Consensus 154 ~~----~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~i~PG~v~t~~~~~~~~~~-~~~~~~~~~~r~~~p~~va~~~ 228 (253)
T PRK05867 154 VP----QQVSHYCASKAAVIHLTKAMAVELAPHKIRVNSVSPGYILTELVEPYTEYQ-PLWEPKIPLGRLGRPEELAGLY 228 (253)
T ss_pred CC----CCccchHHHHHHHHHHHHHHHHHHhHhCeEEEEeecCCCCCcccccchHHH-HHHHhcCCCCCCcCHHHHHHHH
Confidence 11 123579999999998876 26899999999999877321100000 0001122345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++.+.. ...|+++.+.++
T Consensus 229 ~~L~s~~~~~~tG~~i~vdgG 249 (253)
T PRK05867 229 LYLASEASSYMTGSDIVIDGG 249 (253)
T ss_pred HHHcCcccCCcCCCeEEECCC
Confidence 99997643 346778877665
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.9e-20 Score=175.85 Aligned_cols=217 Identities=13% Similarity=0.134 Sum_probs=155.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... + .++.++++|+.|.++
T Consensus 5 ~l~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 71 (252)
T PRK07035 5 DLTGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAA---------G----GKAEALACHIGEMEQ 71 (252)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHH
Confidence 355689999999999999999999999999999999987777666655432 1 457889999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~ 218 (446)
++.++ +.+|+||||||... ....+++..+++|+.++.++++++ ++.+.+++|++||......
T Consensus 72 ~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~ 151 (252)
T PRK07035 72 IDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMKEQGGGSIVNVASVNGVSP 151 (252)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCcEEEEECchhhcCC
Confidence 87665 35899999998532 122224456789999998888777 4456679999999755322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce-eecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|+.+|.+++ ..|++++.|+||.+.++........ .. .........+.+..++|+|
T Consensus 152 ------~~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 225 (252)
T PRK07035 152 ------GDFQGIYSITKAAVISMTKAFAKECAPFGIRVNALLPGLTDTKFASALFKNDAILKQALAHIPLRRHAEPSEMA 225 (252)
T ss_pred ------CCCCcchHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeccccCcccccccCCHHHHHHHHccCCCCCcCCHHHHH
Confidence 1344579999999998876 2589999999999977632110000 00 0000111234567899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.+.. ...++++++-++
T Consensus 226 ~~~~~l~~~~~~~~~g~~~~~dgg 249 (252)
T PRK07035 226 GAVLYLASDASSYTTGECLNVDGG 249 (252)
T ss_pred HHHHHHhCccccCccCCEEEeCCC
Confidence 99999998654 236777777554
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=3.7e-20 Score=177.59 Aligned_cols=197 Identities=18% Similarity=0.128 Sum_probs=142.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+||||+|+||.++++.|+++|++|++++|++++...+.+.+ + .++.++.+|+.|.++++++
T Consensus 1 ~~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dl~~~~~i~~~ 64 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------------G----DNLYIAQLDVRNRAAIEEM 64 (248)
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------------c----cceEEEEecCCCHHHHHHH
Confidence 57999999999999999999999999999999987765543321 1 4688999999999888776
Q ss_pred h-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 161 L-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+ +++|+||||||.... +..++...+++|+.++.++++.+ ++.+.++||++||.+....
T Consensus 65 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~---- 140 (248)
T PRK10538 65 LASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---- 140 (248)
T ss_pred HHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCcccCCC----
Confidence 6 378999999986321 22234556788999977766665 4567789999999765322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--cccceeecccCcccCCccCHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...|.+.+ ..|+++++|+||.+.|...... ......... ......++.++|+|++++
T Consensus 141 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~dvA~~~~ 217 (248)
T PRK10538 141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEK-TYQNTVALTPEDVSEAVW 217 (248)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCeecccccchhhccCcHHHHHh-hccccCCCCHHHHHHHHH
Confidence 1234579999999988765 2689999999999986532110 000000000 001124689999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
+++..+.
T Consensus 218 ~l~~~~~ 224 (248)
T PRK10538 218 WVATLPA 224 (248)
T ss_pred HHhcCCC
Confidence 9998665
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=6.8e-20 Score=183.95 Aligned_cols=209 Identities=16% Similarity=0.110 Sum_probs=151.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. | .++.++.+|++|.+++
T Consensus 6 l~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~---------g----~~~~~v~~Dv~d~~~v 72 (334)
T PRK07109 6 IGRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAA---------G----GEALAVVADVADAEAV 72 (334)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---------C----CcEEEEEecCCCHHHH
Confidence 45679999999999999999999999999999999988877766655432 2 4688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.+..++++++ ++.+.++||++||......
T Consensus 73 ~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~~~~-- 150 (334)
T PRK07109 73 QAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALAYRS-- 150 (334)
T ss_pred HHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhhccC--
Confidence 8775 478999999996432 22234455788888877765555 4455679999999876432
Q ss_pred chhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|+..+.+.+ ..++++++|+||.+.++...... . .+..........++++|+|++
T Consensus 151 ----~~~~~~Y~asK~a~~~~~~~l~~el~~~~~~I~v~~v~Pg~v~T~~~~~~~--~-~~~~~~~~~~~~~~pe~vA~~ 223 (334)
T PRK07109 151 ----IPLQSAYCAAKHAIRGFTDSLRCELLHDGSPVSVTMVQPPAVNTPQFDWAR--S-RLPVEPQPVPPIYQPEVVADA 223 (334)
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCCccCchhhhhh--h-hccccccCCCCCCCHHHHHHH
Confidence 1234579999998876643 14799999999999887321111 0 111111223346799999999
Q ss_pred HHHHHhCCCCCCCcEEEEecC
Q 013273 292 LACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~ 312 (446)
+++++.++. +.+.+.+.
T Consensus 224 i~~~~~~~~----~~~~vg~~ 240 (334)
T PRK07109 224 ILYAAEHPR----RELWVGGP 240 (334)
T ss_pred HHHHHhCCC----cEEEeCcH
Confidence 999998763 34545443
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.8e-20 Score=183.42 Aligned_cols=206 Identities=16% Similarity=0.141 Sum_probs=144.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||++++++|+++|++|++++|+.++...+.+.+ .++.++.+|++|.+++
T Consensus 24 l~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l-----------------~~v~~~~~Dl~d~~~v 86 (315)
T PRK06196 24 LSGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGI-----------------DGVEVVMLDLADLESV 86 (315)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------------hhCeEEEccCCCHHHH
Confidence 45689999999999999999999999999999999987766544322 2478899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC----ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCc-
Q 013273 158 EPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP- 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~- 221 (446)
++++ +++|+||||||.... ...+++..+++|+.++.++++.+ ++.+.+|||++||.+.......
T Consensus 87 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~~ 166 (315)
T PRK06196 87 RAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAGAGARVVALSSAGHRRSPIRW 166 (315)
T ss_pred HHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEECCHHhccCCCCc
Confidence 8766 468999999996422 22234556889999977776655 4455579999999754221110
Q ss_pred -----hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce---eecccCcccC-CccC
Q 013273 222 -----AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI---TLSQEDTLFG-GQVS 284 (446)
Q Consensus 222 -----~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~---~~~~~~~~~~-~~v~ 284 (446)
.....+...|+.+|...+.+.+ ..|+++++|+||++.++........ .. .+........ .+.+
T Consensus 167 ~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (315)
T PRK06196 167 DDPHFTRGYDKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPLQRHLPREEQVALGWVDEHGNPIDPGFKT 246 (315)
T ss_pred cccCccCCCChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCccccCChhhhhhhhhhhhhhhhhhhhcCC
Confidence 1123345679999999887654 3689999999999998843211100 00 0000001111 2467
Q ss_pred HHHHHHHHHHHHhCCC
Q 013273 285 NLQVAELLACMAKNRS 300 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~ 300 (446)
++|+|..+++++..+.
T Consensus 247 ~~~~a~~~~~l~~~~~ 262 (315)
T PRK06196 247 PAQGAATQVWAATSPQ 262 (315)
T ss_pred HhHHHHHHHHHhcCCc
Confidence 8999999999997654
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.1e-20 Score=175.48 Aligned_cols=214 Identities=16% Similarity=0.130 Sum_probs=150.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|+.|++..|+.++.+.+.+.+ + .++.++.+|++|.+++
T Consensus 4 ~~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~~ 67 (245)
T PRK12936 4 LSGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAEL------------G----ERVKIFPANLSDRDEV 67 (245)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------------C----CceEEEEccCCCHHHH
Confidence 35679999999999999999999999999999999877665543321 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ .++|+||||||.... ...++...+++|+.++.++++++. +.+.++||++||...... .
T Consensus 68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~ 146 (245)
T PRK12936 68 KALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMMRRRYGRIINITSVVGVTG-N 146 (245)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHHHhCCCEEEEECCHHhCcC-C
Confidence 7764 468999999996432 122345567899999999888764 345679999999754322 1
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+++ ..|+++++++||++.++.....................+.+++|+++++.
T Consensus 147 -----~~~~~Y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ia~~~~ 221 (245)
T PRK12936 147 -----PGQANYCASKAGMIGFSKSLAQEIATRNVTVNCVAPGFIESAMTGKLNDKQKEAIMGAIPMKRMGTGAEVASAVA 221 (245)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcCcCchhcccChHHHHHHhcCCCCCCCcCHHHHHHHHH
Confidence 123469999987766554 36899999999998765321100000000001122334678999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.+.. ...|+++++.++.
T Consensus 222 ~l~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12936 222 YLASSEAAYVTGQTIHVNGGM 242 (245)
T ss_pred HHcCccccCcCCCEEEECCCc
Confidence 9987543 2358899887763
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.3e-20 Score=174.43 Aligned_cols=216 Identities=16% Similarity=0.114 Sum_probs=153.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|+++|++|+++ .|+.++...+.+.+... ..++.++.+|++|.++
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~ 69 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEE-------------GGDAIAVKADVSSEED 69 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHH
Confidence 346799999999999999999999999999998 89877766555544321 1468999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+.+++. ++|+|||++|.... +..+++..+++|+.+..++++++.. .+.++||++||.......
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~~ 149 (247)
T PRK05565 70 VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMIKRKSGVIVNISSIWGLIGA 149 (247)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECCHhhccCC
Confidence 887764 79999999996522 1122345678899998888877753 456789999997653221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...+.+++ ..|++++++|||++.++.....................++.++|+|+++
T Consensus 150 ------~~~~~y~~sK~a~~~~~~~~~~~~~~~gi~~~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 223 (247)
T PRK05565 150 ------SCEVLYSASKGAVNAFTKALAKELAPSGIRVNAVAPGAIDTEMWSSFSEEDKEGLAEEIPLGRLGKPEEIAKVV 223 (247)
T ss_pred ------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 223469999988776654 3699999999999977643211100000000012233467999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+.++.... ...++++++.++
T Consensus 224 ~~l~~~~~~~~~g~~~~~~~~ 244 (247)
T PRK05565 224 LFLASDDASYITGQIITVDGG 244 (247)
T ss_pred HHHcCCccCCccCcEEEecCC
Confidence 99997644 246778877665
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.7e-20 Score=177.81 Aligned_cols=211 Identities=21% Similarity=0.177 Sum_probs=150.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+..... ..++.++.+|+.|.+++
T Consensus 7 ~~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~ 64 (260)
T PRK06523 7 LAGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDDL----------------------PEGVEFVAADLTTAEGC 64 (260)
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhhc----------------------CCceeEEecCCCCHHHH
Confidence 45689999999999999999999999999999999864310 14688999999999877
Q ss_pred HHHh-------cCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCC
Q 013273 158 EPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~ 218 (446)
++++ +++|+||||||... ....++...+++|+.++.++++++ ++.+.++||++||......
T Consensus 65 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~ 144 (260)
T PRK06523 65 AAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIARGSGVIIHVTSIQRRLP 144 (260)
T ss_pred HHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEecccccCC
Confidence 7554 56899999998532 122334556789999998887665 3456679999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c----ccceee---------cccCc
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E----THNITL---------SQEDT 277 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~----~~~~~~---------~~~~~ 277 (446)
. ......|+.+|..++.+++ ..|+++++|+||++.++..... . ...... .....
T Consensus 145 ~-----~~~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (260)
T PRK06523 145 L-----PESTTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEAAVALAERLAEAAGTDYEGAKQIIMDSLGGI 219 (260)
T ss_pred C-----CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccHHHHHHHHHhhcCCCHHHHHHHHHHHhccC
Confidence 1 1235679999999987765 2689999999999998742110 0 000000 00111
Q ss_pred ccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
..+.+..++|+|+++++++.+.. ...++++.+.++...
T Consensus 220 p~~~~~~~~~va~~~~~l~s~~~~~~~G~~~~vdgg~~~ 258 (260)
T PRK06523 220 PLGRPAEPEEVAELIAFLASDRAASITGTEYVIDGGTVP 258 (260)
T ss_pred ccCCCCCHHHHHHHHHHHhCcccccccCceEEecCCccC
Confidence 23446789999999999997643 346788888776543
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.85 E-value=9.3e-20 Score=175.47 Aligned_cols=218 Identities=13% Similarity=0.146 Sum_probs=158.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|+||||+|+||+++++.|+++|++|++++|+.+..+.+.++++.. + .++.++.+|++|.+++
T Consensus 9 l~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~i 75 (255)
T PRK06113 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---------G----GQAFACRCDITSEQEL 75 (255)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999887776665554432 1 4688899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCCc-----cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
.+++ +++|+||||||..... ..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 76 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~--- 152 (255)
T PRK06113 76 SALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENK--- 152 (255)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhcCCcEEEEEecccccCC---
Confidence 7765 4679999999964321 12234447899999999999986 344569999999765332
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|+..+.+++ ..|+++++|+||.+.++........... .......++.+..++|++++++
T Consensus 153 ---~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 229 (255)
T PRK06113 153 ---NINMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL 229 (255)
T ss_pred ---CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEecccccccccccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1234579999999998875 2689999999999987632110000000 0011122345679999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++.+.. ...|+++++.++..
T Consensus 230 ~l~~~~~~~~~G~~i~~~gg~~ 251 (255)
T PRK06113 230 FLCSPAASWVSGQILTVSGGGV 251 (255)
T ss_pred HHcCccccCccCCEEEECCCcc
Confidence 9997643 23688898887743
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=7.4e-20 Score=178.41 Aligned_cols=216 Identities=18% Similarity=0.148 Sum_probs=154.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+++... + .++.++.+|+.|.+++
T Consensus 8 ~~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~v 74 (278)
T PRK08277 8 LKGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAA---------G----GEALAVKADVLDKESL 74 (278)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999987776665554321 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc---------------------cCCCCCcccchHHHHHHHHHHHH----hCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEKE---------------------VFDITGPYRIDFQATKNLVDAAT----IAKVN 205 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~---------------------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~ 205 (446)
..++ +++|+||||||..... ..++...+++|+.++..+++++. +.+.+
T Consensus 75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g 154 (278)
T PRK08277 75 EQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGRKGG 154 (278)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCc
Confidence 7765 4789999999953211 12234457789999887766653 44567
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-cc--c---e-e
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-TH--N---I-T 271 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~--~---~-~ 271 (446)
+||++||...... ......|+.+|+..+.+++ ..|+++++|+||++.++...... .. . . .
T Consensus 155 ~ii~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~ 228 (278)
T PRK08277 155 NIINISSMNAFTP------LTKVPAYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQNRALLFNEDGSLTERAN 228 (278)
T ss_pred EEEEEccchhcCC------CCCCchhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcchhhhhccccccchhHHH
Confidence 9999999876432 2334579999999998876 25899999999999987422100 00 0 0 0
Q ss_pred ecccCcccCCccCHHHHHHHHHHHHhC-CC-CCCCcEEEEecC
Q 013273 272 LSQEDTLFGGQVSNLQVAELLACMAKN-RS-LSYCKVVEVIAE 312 (446)
Q Consensus 272 ~~~~~~~~~~~v~~~DvA~ai~~ll~~-~~-~~~~~v~ni~~~ 312 (446)
........+.+..++|+|+++++++.+ .. ...|+++.+-++
T Consensus 229 ~~~~~~p~~r~~~~~dva~~~~~l~s~~~~~~~tG~~i~vdgG 271 (278)
T PRK08277 229 KILAHTPMGRFGKPEELLGTLLWLADEKASSFVTGVVLPVDGG 271 (278)
T ss_pred HHhccCCccCCCCHHHHHHHHHHHcCccccCCcCCCEEEECCC
Confidence 000112234567899999999999886 33 345777877655
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=8.2e-20 Score=178.34 Aligned_cols=197 Identities=15% Similarity=0.138 Sum_probs=140.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+||||+|+||+++++.|+++|++|++++|+.++...+.+ .+++++.+|++|.++++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~~-------------------~~~~~~~~Dl~d~~~~~ 63 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALEA-------------------EGLEAFQLDYAEPESIA 63 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------CCceEEEccCCCHHHHH
Confidence 35789999999999999999999999999999999876654321 35788999999998887
Q ss_pred HHhc--------CCCEEEEcccCCCCc------cCCCCCcccchHHH----HHHHHHHHHhCCCCEEEEEccccccCCCC
Q 013273 159 PALG--------NASVVICCIGASEKE------VFDITGPYRIDFQA----TKNLVDAATIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 159 ~a~~--------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g----~~~l~~aa~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ .+|+||||||..... ..++...+++|+.| +.++++.+++.+.++||++||......
T Consensus 64 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~-- 141 (277)
T PRK05993 64 ALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQGQGRIVQCSSILGLVP-- 141 (277)
T ss_pred HHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhcCCCEEEEECChhhcCC--
Confidence 7652 579999999864322 12234467899999 455566666777889999999765322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc--cceee----------------cc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET--HNITL----------------SQ 274 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~--~~~~~----------------~~ 274 (446)
......|+.+|+..|.+.+ ..|+++++|+||++.++..... .. ..... ..
T Consensus 142 ----~~~~~~Y~asK~a~~~~~~~l~~el~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (277)
T PRK05993 142 ----MKYRGAYNASKFAIEGLSLTLRMELQGSGIHVSLIEPGPIETRFRANALAAFKRWIDIENSVHRAAYQQQMARLEG 217 (277)
T ss_pred ----CCccchHHHHHHHHHHHHHHHHHHhhhhCCEEEEEecCCccCchhhHHHHHHhhhhccccchhHHHHHHHHHHHHh
Confidence 1334579999999998754 4799999999999987632110 00 00000 00
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
........++++++|+.++.++.++.
T Consensus 218 ~~~~~~~~~~~~~va~~i~~a~~~~~ 243 (277)
T PRK05993 218 GGSKSRFKLGPEAVYAVLLHALTAPR 243 (277)
T ss_pred hhhccccCCCHHHHHHHHHHHHcCCC
Confidence 00001123789999999999998764
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.85 E-value=4.9e-20 Score=177.49 Aligned_cols=215 Identities=14% Similarity=0.081 Sum_probs=153.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++. .+.+.+... + .++.++.+|++|.+++
T Consensus 5 l~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~-~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 70 (258)
T PRK08628 5 LKDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDD-EFAEELRAL---------Q----PRAEFVQVDLTDDAQC 70 (258)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhH-HHHHHHHhc---------C----CceEEEEccCCCHHHH
Confidence 5668999999999999999999999999999999988765 443433321 1 4689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc-----cCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCch
Q 013273 158 EPALG-------NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++++ ++|+||||||..... ..++...+++|+.+..++++++.+ .+.++||++||......
T Consensus 71 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---- 146 (258)
T PRK08628 71 RDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLKASRGAIVNISSKTALTG---- 146 (258)
T ss_pred HHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhhccCcEEEEECCHHhccC----
Confidence 87773 689999999953221 123445578899999999888753 23468999999765322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccc---eeec--ccCccc-CCccCHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHN---ITLS--QEDTLF-GGQVSNLQV 288 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~---~~~~--~~~~~~-~~~v~~~Dv 288 (446)
...+..|+.+|...|.+++ ..|++++.|+||+++++.... ..... .... ...... ..++.++|+
T Consensus 147 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 224 (258)
T PRK08628 147 --QGGTSGYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPLYENWIATFDDPEAKLAAITAKIPLGHRMTTAEEI 224 (258)
T ss_pred --CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHHHHHHhhhccCHHHHHHHHHhcCCccccCCCHHHH
Confidence 1345579999999988775 258999999999999984211 00000 0000 000111 246889999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+++++++.+.. ...++.|.+.++
T Consensus 225 a~~~~~l~~~~~~~~~g~~~~~~gg 249 (258)
T PRK08628 225 ADTAVFLLSERSSHTTGQWLFVDGG 249 (258)
T ss_pred HHHHHHHhChhhccccCceEEecCC
Confidence 999999997653 235677777554
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=174.25 Aligned_cols=193 Identities=17% Similarity=0.153 Sum_probs=140.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..++|+||||+|+||++++++|+++| ++|++++|+.++ ...+.++++.. + ..+++++.+|+.|.++
T Consensus 7 ~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~---------~---~~~v~~~~~D~~~~~~ 74 (253)
T PRK07904 7 NPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAA---------G---ASSVEVIDFDALDTDS 74 (253)
T ss_pred CCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhc---------C---CCceEEEEecCCChHH
Confidence 45689999999999999999999995 999999999876 66665555432 1 1368999999999888
Q ss_pred HHHHh------cCCCEEEEcccCCCCccCCCC------CcccchHHHHHHH----HHHHHhCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL------GNASVVICCIGASEKEVFDIT------GPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~------~~~D~VI~~Ag~~~~~~~~~~------~~~~vNv~g~~~l----~~aa~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|++|||+|........+. ..+++|+.++.++ ++.+++.+.++||++||......
T Consensus 75 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~~~~~iv~isS~~g~~~-- 152 (253)
T PRK07904 75 HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQGFGQIIAMSSVAGERV-- 152 (253)
T ss_pred HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhcCCceEEEEechhhcCC--
Confidence 66554 379999999987532211111 2478899888764 55556677789999999765221
Q ss_pred chhhhchhhHHHHHHHHHHHHH-------HhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|+....+. +.+|+++++|+||++.++.... .. .....++++|+|+.++
T Consensus 153 ----~~~~~~Y~~sKaa~~~~~~~l~~el~~~~i~v~~v~Pg~v~t~~~~~-------~~----~~~~~~~~~~~A~~i~ 217 (253)
T PRK07904 153 ----RRSNFVYGSTKAGLDGFYLGLGEALREYGVRVLVVRPGQVRTRMSAH-------AK----EAPLTVDKEDVAKLAV 217 (253)
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHhhcCCEEEEEeeCceecchhcc-------CC----CCCCCCCHHHHHHHHH
Confidence 122346999999877443 3579999999999998763210 00 0113589999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
.++.+..
T Consensus 218 ~~~~~~~ 224 (253)
T PRK07904 218 TAVAKGK 224 (253)
T ss_pred HHHHcCC
Confidence 9998765
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.3e-20 Score=176.51 Aligned_cols=216 Identities=14% Similarity=0.124 Sum_probs=154.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|++.|++|+++.|+ ...+.+.+.+... + .++.++.+|+.|.+++
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~i 78 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKE---------G----RKVTFVQVDLTKPESA 78 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhc---------C----CceEEEEcCCCCHHHH
Confidence 457899999999999999999999999999999998 4445544443321 1 4688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ .+|++|||+|.... ...+++..+++|+.+..++++++. +.+.+++|++||.......
T Consensus 79 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 157 (258)
T PRK06935 79 EKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQGSGKIINIASMLSFQGG- 157 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhcCCeEEEEECCHHhccCC-
Confidence 87764 68999999996432 122345567889999888877664 4456799999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce--eecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~--~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++.......... .........+.+..++|+|++
T Consensus 158 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (258)
T PRK06935 158 -----KFVPAYTASKHGVAGLTKAFANELAAYNIQVNAIAPGYIKTANTAPIRADKNRNDEILKRIPAGRWGEPDDLMGA 232 (258)
T ss_pred -----CCchhhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeccccccchhhcccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 234479999999988765 268999999999998774221100000 000011223567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...|+++.+.++.
T Consensus 233 ~~~l~s~~~~~~~G~~i~~dgg~ 255 (258)
T PRK06935 233 AVFLASRASDYVNGHILAVDGGW 255 (258)
T ss_pred HHHHcChhhcCCCCCEEEECCCe
Confidence 999997643 3467788776653
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=178.99 Aligned_cols=197 Identities=17% Similarity=0.175 Sum_probs=146.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+... + .++.++.+|+.|.++
T Consensus 37 ~~~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~---------~----~~~~~~~~Dl~d~~~ 103 (293)
T PRK05866 37 DLTGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRA---------G----GDAMAVPCDLSDLDA 103 (293)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence 456689999999999999999999999999999999988777666554321 1 468899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCcc--------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC
Q 013273 157 IEPALG-------NASVVICCIGASEKEV--------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~~--------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~ 217 (446)
+.++++ ++|+||||||...... .++...+++|+.++.++++++. +.+.++||++||.++..
T Consensus 104 v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~ 183 (293)
T PRK05866 104 VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLERGDGHIINVATWGVLS 183 (293)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcC
Confidence 887764 7899999999643211 1223457889999888887764 56678999999976532
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.. ......|+.+|+..+.+++ ..|+++++|+||.+-++..... . ... ....++++|+|+
T Consensus 184 ~~-----~p~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~pg~v~T~~~~~~-----~--~~~--~~~~~~pe~vA~ 249 (293)
T PRK05866 184 EA-----SPLFSVYNASKAALSAVSRVIETEWGDRGVHSTTLYYPLVATPMIAPT-----K--AYD--GLPALTADEAAE 249 (293)
T ss_pred CC-----CCCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEEcCcccCcccccc-----c--ccc--CCCCCCHHHHHH
Confidence 11 1234579999999987754 3689999999998877632100 0 000 112479999999
Q ss_pred HHHHHHhCCC
Q 013273 291 LLACMAKNRS 300 (446)
Q Consensus 291 ai~~ll~~~~ 300 (446)
.++.++++..
T Consensus 250 ~~~~~~~~~~ 259 (293)
T PRK05866 250 WMVTAARTRP 259 (293)
T ss_pred HHHHHHhcCC
Confidence 9999998653
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-20 Score=182.59 Aligned_cols=201 Identities=15% Similarity=0.105 Sum_probs=148.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~---------g----~~~~~~~~Dv~d~~~v 71 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRAL---------G----AEVLVVPTDVTDADQV 71 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeeCCCHHHH
Confidence 45679999999999999999999999999999999998887776655432 2 4688899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||..... ..+++..+++|+.++.++++++. +.+.++||++||.+.....
T Consensus 72 ~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~~~g~iV~isS~~~~~~~- 150 (330)
T PRK06139 72 KALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQGHGIFINMISLGGFAAQ- 150 (330)
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhcCCC-
Confidence 8776 5689999999964321 12334568899999999887763 4455799999997653221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+..+.+.+ . .|++++.|+||++.++...... .. ...........++++|+|+++
T Consensus 151 -----p~~~~Y~asKaal~~~~~sL~~El~~~~gI~V~~v~Pg~v~T~~~~~~~--~~-~~~~~~~~~~~~~pe~vA~~i 222 (330)
T PRK06139 151 -----PYAAAYSASKFGLRGFSEALRGELADHPDIHVCDVYPAFMDTPGFRHGA--NY-TGRRLTPPPPVYDPRRVAKAV 222 (330)
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEecCCccCccccccc--cc-ccccccCCCCCCCHHHHHHHH
Confidence 234579999998665543 2 3899999999999988421110 11 111111122458999999999
Q ss_pred HHHHhCCC
Q 013273 293 ACMAKNRS 300 (446)
Q Consensus 293 ~~ll~~~~ 300 (446)
+.++.++.
T Consensus 223 l~~~~~~~ 230 (330)
T PRK06139 223 VRLADRPR 230 (330)
T ss_pred HHHHhCCC
Confidence 99998765
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.7e-19 Score=174.23 Aligned_cols=202 Identities=17% Similarity=0.154 Sum_probs=146.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||+++++.|+++|++|++++|+..+...+.+.+... + .++.++.+|+.|.+++++
T Consensus 1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~~~~ 67 (263)
T PRK06181 1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADH---------G----GEALVVPTDVSDAEACER 67 (263)
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHHHH
Confidence 358999999999999999999999999999999987766655544321 1 478899999999998887
Q ss_pred Hhc-------CCCEEEEcccCCCCc-------cCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCch
Q 013273 160 ALG-------NASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~~-------~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++ ++|+||||+|..... .+++...+++|+.++.++++.+.. .+.++||++||......
T Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~iv~~sS~~~~~~---- 143 (263)
T PRK06181 68 LIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHLKASRGQIVVVSSLAGLTG---- 143 (263)
T ss_pred HHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCEEEEEecccccCC----
Confidence 764 689999999864321 111234478999999999998853 24578999999765332
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
..+...|+.+|...|.+++ ..|+++++++||++.++...... ...............+++++|+|++++.
T Consensus 144 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~~ 221 (263)
T PRK06181 144 --VPTRSGYAASKHALHGFFDSLRIELADDGVAVTVVCPGFVATDIRKRALDGDGKPLGKSPMQESKIMSAEECAEAILP 221 (263)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHhhhcCceEEEEecCccccCcchhhccccccccccccccccCCCCHHHHHHHHHH
Confidence 1334679999999987764 36899999999999876422110 0000111111112367999999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++....
T Consensus 222 ~~~~~~ 227 (263)
T PRK06181 222 AIARRK 227 (263)
T ss_pred HhhCCC
Confidence 998643
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=4.5e-20 Score=176.43 Aligned_cols=215 Identities=15% Similarity=0.161 Sum_probs=147.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|||||+|+||++++++|+++|++|++..+ +++....+.+.++.. + .++.++.+|++|.++++
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~~~ 68 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQ---------G----GEALAVAADVADEADVL 68 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhC---------C----CcEEEEEeccCCHHHHH
Confidence 358999999999999999999999999888764 444444443333321 1 46888999999999888
Q ss_pred HHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC----C---CCEEEEEccccccC
Q 013273 159 PALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNK 217 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~----~---v~r~V~vSS~~~~~ 217 (446)
+++. .+|+||||||.... ...++...+++|+.++.++++++.+. . -++||++||.....
T Consensus 69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 148 (248)
T PRK06123 69 RLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARL 148 (248)
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcC
Confidence 7764 68999999996432 11233456889999999998888542 1 24799999976532
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA 289 (446)
... ..+..|+.+|...|.+++ ..|+++++||||+++++........... ............+++|++
T Consensus 149 ~~~-----~~~~~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d~a 223 (248)
T PRK06123 149 GSP-----GEYIDYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEIHASGGEPGRVDRVKAGIPMGRGGTAEEVA 223 (248)
T ss_pred CCC-----CCccchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCchhhccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 211 112359999999998765 2589999999999999843211000000 000011122235889999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.... ...+++|++.++
T Consensus 224 ~~~~~l~~~~~~~~~g~~~~~~gg 247 (248)
T PRK06123 224 RAILWLLSDEASYTTGTFIDVSGG 247 (248)
T ss_pred HHHHHHhCccccCccCCEEeecCC
Confidence 99999997643 246788988764
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.1e-20 Score=215.05 Aligned_cols=245 Identities=24% Similarity=0.181 Sum_probs=169.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK- 153 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d- 153 (446)
..++|+|||||||||.++++.|+++| ++|+++.|+......+.+......-.+. .......+++++.+|+.+
T Consensus 970 ~~~~VlvTGatGflG~~l~~~Ll~~~~~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~---~~~~~~~~i~~~~gDl~~~ 1046 (1389)
T TIGR03443 970 TPITVFLTGATGFLGSFILRDLLTRRSNSNFKVFAHVRAKSEEAGLERLRKTGTTYGI---WDEEWASRIEVVLGDLSKE 1046 (1389)
T ss_pred CCceEEEeCCccccHHHHHHHHHhcCCCCCcEEEEEECcCChHHHHHHHHHHHHHhCC---CchhhhcceEEEeccCCCc
Confidence 35789999999999999999999987 8999999986554332221111100000 000112479999999974
Q ss_pred -----hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC----------
Q 013273 154 -----RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---------- 218 (446)
Q Consensus 154 -----~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~---------- 218 (446)
.+.+.++..++|+|||||+.... ...+......|+.|+.+++++|++.++++|+|+||.++...
T Consensus 1047 ~lgl~~~~~~~l~~~~d~iiH~Aa~~~~-~~~~~~~~~~nv~gt~~ll~~a~~~~~~~~v~vSS~~v~~~~~~~~~~~~~ 1125 (1389)
T TIGR03443 1047 KFGLSDEKWSDLTNEVDVIIHNGALVHW-VYPYSKLRDANVIGTINVLNLCAEGKAKQFSFVSSTSALDTEYYVNLSDEL 1125 (1389)
T ss_pred cCCcCHHHHHHHHhcCCEEEECCcEecC-ccCHHHHHHhHHHHHHHHHHHHHhCCCceEEEEeCeeecCcccccchhhhh
Confidence 35567777899999999986532 12223334579999999999999999999999999876421
Q ss_pred ------CCchh------hhchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCCccccc-ccce---------eec
Q 013273 219 ------GFPAA------ILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKE-THNI---------TLS 273 (446)
Q Consensus 219 ------~~~~~------~~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~~~~~~-~~~~---------~~~ 273 (446)
+.++. ......+|+.+|+.+|.++.. .|++++++|||.|||+...... ...+ .++
T Consensus 1126 ~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~~~~~~~~~~~~~~~~~~~ 1205 (1389)
T TIGR03443 1126 VQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGATNTDDFLLRMLKGCIQLG 1205 (1389)
T ss_pred hhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCCCCchhHHHHHHHHHHHhC
Confidence 00010 112345799999999999864 6899999999999998532110 0000 000
Q ss_pred c--cCcccCCccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhc
Q 013273 274 Q--EDTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKI 327 (446)
Q Consensus 274 ~--~~~~~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i 327 (446)
. .......+++++|+|++++.++.++.. ..+.+||+.++...++.++.+.+.+.
T Consensus 1206 ~~p~~~~~~~~~~Vddva~ai~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 1262 (1389)
T TIGR03443 1206 LIPNINNTVNMVPVDHVARVVVAAALNPPKESELAVAHVTGHPRIRFNDFLGTLKTY 1262 (1389)
T ss_pred CcCCCCCccccccHHHHHHHHHHHHhCCcccCCCCEEEeCCCCCCcHHHHHHHHHHh
Confidence 0 111124689999999999999876531 23569999999888899999988764
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1e-19 Score=178.16 Aligned_cols=204 Identities=13% Similarity=0.067 Sum_probs=143.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.+......+++... ..++.++.+|++|.+++
T Consensus 4 ~~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~d~~~~ 70 (287)
T PRK06194 4 FAGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQ-------------GAEVLGVRTDVSDAAQV 70 (287)
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc-------------CCeEEEEECCCCCHHHH
Confidence 34679999999999999999999999999999999877666555443321 14688899999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCC------CEEEEEcccc
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKV------NHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v------~r~V~vSS~~ 214 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++ .+.+. ++||++||.+
T Consensus 71 ~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~ 150 (287)
T PRK06194 71 EALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMA 150 (287)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChh
Confidence 88774 57999999996432 22334455789999999988774 44433 5899999976
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCCCcccccccceeeccc----------
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQE---------- 275 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~---------- 275 (446)
..... .....|+.+|+..|.+++. .+++++.+.||++.++...........+...
T Consensus 151 ~~~~~------~~~~~Y~~sK~a~~~~~~~l~~e~~~~~~~irv~~v~pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (287)
T PRK06194 151 GLLAP------PAMGIYNVSKHAVVSLTETLYQDLSLVTDQVGASVLCPYFVPTGIWQSERNRPADLANTAPPTRSQLIA 224 (287)
T ss_pred hccCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEEeCcccCccccccccCchhcccCccccchhhHH
Confidence 64321 2345699999999887651 3588889999999765321110000111000
Q ss_pred -----CcccCCccCHHHHHHHHHHHHhCCC
Q 013273 276 -----DTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 276 -----~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.....+.+++.|+|+.++.++....
T Consensus 225 ~~~~~~~~~~~~~s~~dva~~i~~~~~~~~ 254 (287)
T PRK06194 225 QAMSQKAVGSGKVTAEEVAQLVFDAIRAGR 254 (287)
T ss_pred HHHHHhhhhccCCCHHHHHHHHHHHHHcCC
Confidence 0011134899999999999886443
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=174.27 Aligned_cols=218 Identities=14% Similarity=0.104 Sum_probs=153.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.+ ....+.+.++.. + .++.++.+|+.|.++
T Consensus 6 ~~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 72 (254)
T PRK06114 6 LDGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAA---------G----RRAIQIAADVTSKAD 72 (254)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---------C----CceEEEEcCCCCHHH
Confidence 46789999999999999999999999999999999764 334444444321 1 468899999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++..+++++. +.+.++||++||.......
T Consensus 73 i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~ 152 (254)
T PRK06114 73 LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLENGGGSIVNIASMSGIIVN 152 (254)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcEEEEECchhhcCCC
Confidence 87765 457999999996432 223455668899999988877764 3455799999997653211
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-eeecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~~v~~~DvA~a 291 (446)
. ......|..+|+..+.+.+ ..|+++++|+||++.++......... ..........+.+..++|+|++
T Consensus 153 ~----~~~~~~Y~~sKaa~~~l~~~la~e~~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~ 228 (254)
T PRK06114 153 R----GLLQAHYNASKAGVIHLSKSLAMEWVGRGIRVNSISPGYTATPMNTRPEMVHQTKLFEEQTPMQRMAKVDEMVGP 228 (254)
T ss_pred C----CCCcchHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeecCccCcccccccchHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 1 0123579999998887765 36899999999999887422110000 0000112223456789999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...|+++.+.++
T Consensus 229 ~~~l~s~~~~~~tG~~i~~dgg 250 (254)
T PRK06114 229 AVFLLSDAASFCTGVDLLVDGG 250 (254)
T ss_pred HHHHcCccccCcCCceEEECcC
Confidence 999997643 346777777655
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=173.31 Aligned_cols=215 Identities=13% Similarity=0.120 Sum_probs=152.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+.+++.|+++|++|++++|+..+...+.++++.. + .++.++.+|+.|.+++
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 69 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGAL---------G----TEVRGYAANVTDEEDV 69 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEcCCCCHHHH
Confidence 34678999999999999999999999999999999987776655544321 1 5788999999998887
Q ss_pred HHHh-------cCCCEEEEcccCCCCc---------------cCCCCCcccchHHHHHHHHHHHH----hC-CCCEEEEE
Q 013273 158 EPAL-------GNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMV 210 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~---------------~~~~~~~~~vNv~g~~~l~~aa~----~~-~v~r~V~v 210 (446)
++++ +++|+||||+|..... ..++...+++|+.++.++.+++. +. ..++||++
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ 149 (253)
T PRK08217 70 EATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINI 149 (253)
T ss_pred HHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 7655 3579999999953311 11223346789999987776553 22 33479999
Q ss_pred ccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCcc
Q 013273 211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV 283 (446)
Q Consensus 211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v 283 (446)
||.+.. +. .....|+.+|...|.+++ ..|++++.++||++.++...................+.+.
T Consensus 150 ss~~~~--~~-----~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~ 222 (253)
T PRK08217 150 SSIARA--GN-----MGQTNYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAAMKPEALERLEKMIPVGRLG 222 (253)
T ss_pred cccccc--CC-----CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCHHHHHHHHhcCCcCCCc
Confidence 987542 21 235679999999987754 3689999999999988743111000000001112234567
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
+++|+|+++.+++.+.. ..+++|++.++.
T Consensus 223 ~~~~~a~~~~~l~~~~~-~~g~~~~~~gg~ 251 (253)
T PRK08217 223 EPEEIAHTVRFIIENDY-VTGRVLEIDGGL 251 (253)
T ss_pred CHHHHHHHHHHHHcCCC-cCCcEEEeCCCc
Confidence 99999999999997643 578899988764
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.2e-20 Score=176.44 Aligned_cols=215 Identities=17% Similarity=0.176 Sum_probs=151.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++|+||||+|+||+++++.|+++|++|+++.|+ .+....+.+.++.. + .++.++.+|++|.++++
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~~ 68 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSH---------G----VRAEIRQLDLSDLPEGA 68 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---------C----CceEEEEccCCCHHHHH
Confidence 4689999999999999999999999999988764 44444444443321 1 57899999999998877
Q ss_pred HHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCCC
Q 013273 159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~~ 220 (446)
.++ +.+|+||||+|.... +..++...+++|+.+..++++++... + .++||++||......
T Consensus 69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~-- 146 (256)
T PRK12743 69 QALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEHTP-- 146 (256)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeeccccCC--
Confidence 765 468999999996432 12234556789999999999887542 2 358999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
..+...|+.+|...+.+++ ..|++++.|+||+++++...................+...+++|+|++++
T Consensus 147 ----~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 222 (256)
T PRK12743 147 ----LPGASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMNGMDDSDVKPDSRPGIPLGRPGDTHEIASLVA 222 (256)
T ss_pred ----CCCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccccccChHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 2345679999999987765 36899999999999987422110000000011122334678999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.... ...|.++.+.++.
T Consensus 223 ~l~~~~~~~~~G~~~~~dgg~ 243 (256)
T PRK12743 223 WLCSEGASYTTGQSLIVDGGF 243 (256)
T ss_pred HHhCccccCcCCcEEEECCCc
Confidence 9987643 2357777776654
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=176.26 Aligned_cols=215 Identities=18% Similarity=0.158 Sum_probs=152.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+ +....+.++++.. + .++.++.+|++|.+++
T Consensus 4 l~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 69 (272)
T PRK08589 4 LENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSN---------G----GKAKAYHVDISDEQQV 69 (272)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhc---------C----CeEEEEEeecCCHHHH
Confidence 456899999999999999999999999999999999 6666555554321 1 4689999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..+++..+++|+.+...+++++. +.+ ++||++||.......
T Consensus 70 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~ 148 (272)
T PRK08589 70 KDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQG-GSIINTSSFSGQAAD 148 (272)
T ss_pred HHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEeCchhhcCCC
Confidence 7765 468999999996421 112234557789999988877764 334 699999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc----eeec---ccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN----ITLS---QEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~----~~~~---~~~~~~~~~v~ 284 (446)
.....|+.+|...+.+++ ..|+++++|+||.+.++..... .... ..+. ......+.+..
T Consensus 149 ------~~~~~Y~asKaal~~l~~~la~e~~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (272)
T PRK08589 149 ------LYRSGYNAAKGAVINFTKSIAIEYGRDGIRANAIAPGTIETPLVDKLTGTSEDEAGKTFRENQKWMTPLGRLGK 222 (272)
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCchhhhhcccchhhHHHHHhhhhhccCCCCCCcC
Confidence 224579999999988875 3689999999999987732110 0000 0000 01112344678
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++|+|+++++++.+.. ...++++.+.++.
T Consensus 223 ~~~va~~~~~l~s~~~~~~~G~~i~vdgg~ 252 (272)
T PRK08589 223 PEEVAKLVVFLASDDSSFITGETIRIDGGV 252 (272)
T ss_pred HHHHHHHHHHHcCchhcCcCCCEEEECCCc
Confidence 9999999999997643 3467777776653
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=174.24 Aligned_cols=216 Identities=17% Similarity=0.171 Sum_probs=156.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++|+||||+|+||+++++.|+++|++|++++|+.+....+.++++.. + .++.++.+|++|.+++
T Consensus 9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 75 (256)
T PRK06124 9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAA---------G----GAAEALAFDIADEEAV 75 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEccCCCHHHH
Confidence 56789999999999999999999999999999999987766665555432 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
.+++ +.+|+||||+|.... ...+++..+++|+.++.++++++.+ .+.++||++||.......
T Consensus 76 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~- 154 (256)
T PRK06124 76 AAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMKRQGYGRIIAITSIAGQVAR- 154 (256)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEeechhccCC-
Confidence 7766 357999999996432 1223445578999999999877653 567899999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccce-eecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+++ ..|++++.|+||.+.++..... ..... .........+.+++++|++++
T Consensus 155 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 229 (256)
T PRK06124 155 -----AGDAVYPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATETNAAMAADPAVGPWLAQRTPLGRWGRPEEIAGA 229 (256)
T ss_pred -----CCccHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcchhhhccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 223579999999887765 2589999999999998742110 00000 000111223567999999999
Q ss_pred HHHHHhCCCC-CCCcEEEEecC
Q 013273 292 LACMAKNRSL-SYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~~-~~~~v~ni~~~ 312 (446)
+++++.+... ..|+.+.+.++
T Consensus 230 ~~~l~~~~~~~~~G~~i~~dgg 251 (256)
T PRK06124 230 AVFLASPAASYVNGHVLAVDGG 251 (256)
T ss_pred HHHHcCcccCCcCCCEEEECCC
Confidence 9999987542 34666666544
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=173.33 Aligned_cols=214 Identities=16% Similarity=0.115 Sum_probs=150.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||++++++|+++|++|++++|+.. ..+.+.++.. + .++.++.+|++|.+++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~--~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 67 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEP--SETQQQVEAL---------G----RRFLSLTADLSDIEAI 67 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchH--HHHHHHHHhc---------C----CceEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999752 2333333221 1 4689999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~ 219 (446)
..++ +++|+||||||.... +..+++..+++|+.+..++++++.+ .+ .++||++||.......
T Consensus 68 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 147 (248)
T TIGR01832 68 KALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG 147 (248)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC
Confidence 7665 468999999996432 1223455678999999999988853 33 4699999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceee--cccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITL--SQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~--~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+. .|+++++|+||++.++............ .......+.+++++|+|+
T Consensus 148 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 221 (248)
T TIGR01832 148 ------IRVPSYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNNTQALRADEDRNAAILERIPAGRWGTPDDIGG 221 (248)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcchhccccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1234699999999887652 5899999999999887422110000000 001112356899999999
Q ss_pred HHHHHHhCCCC-CCCcEEEEecC
Q 013273 291 LLACMAKNRSL-SYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~~-~~~~v~ni~~~ 312 (446)
++++++.+... ..|+++.+.++
T Consensus 222 ~~~~l~s~~~~~~~G~~i~~dgg 244 (248)
T TIGR01832 222 PAVFLASSASDYVNGYTLAVDGG 244 (248)
T ss_pred HHHHHcCccccCcCCcEEEeCCC
Confidence 99999976432 34666655443
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.2e-19 Score=174.46 Aligned_cols=214 Identities=18% Similarity=0.131 Sum_probs=152.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++|||||+|+||+++++.|+++|++|++++|+.++...+...+... + .++.++.+|++|.+++.+
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~~~ 68 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKD---------G----GKAIAVKADVSDRDQVFA 68 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHHHHH
Confidence 468999999999999999999999999999999987776665554321 1 468899999999988777
Q ss_pred Hh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCc
Q 013273 160 AL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~ 221 (446)
++ +++|+||||||..... ..+++..+++|+.++..+++++.+ .+ .++||++||.......
T Consensus 69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 146 (256)
T PRK08643 69 AVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQAGVVGN-- 146 (256)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccccccCC--
Confidence 66 3689999999864321 122345578899998887777753 22 3589999997653221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc---------ccce--eecccCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---------THNI--TLSQEDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~---------~~~~--~~~~~~~~~~~~v 283 (446)
.....|+.+|...+.+++ ..|++++.|+||++.++...... .... .........+.+.
T Consensus 147 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (256)
T PRK08643 147 ----PELAVYSSTKFAVRGLTQTAARDLASEGITVNAYAPGIVKTPMMFDIAHQVGENAGKPDEWGMEQFAKDITLGRLS 222 (256)
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcChhhhHHHhhhccccCCCchHHHHHHhccCCCCCCc
Confidence 234579999999887665 36899999999999887421100 0000 0000112344568
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.++|+|+++.+++.+.. ...|+++.+-++
T Consensus 223 ~~~~va~~~~~L~~~~~~~~~G~~i~vdgg 252 (256)
T PRK08643 223 EPEDVANCVSFLAGPDSDYITGQTIIVDGG 252 (256)
T ss_pred CHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 89999999999997643 346777777555
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.6e-20 Score=176.96 Aligned_cols=201 Identities=12% Similarity=0.100 Sum_probs=145.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++.. + .++.++.+|+.|.+++.++
T Consensus 1 ~~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~~~~~ 67 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREA---------G----GDGFYQRCDVRDYSQLTAL 67 (270)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEccCCCHHHHHHH
Confidence 47999999999999999999999999999999988777666555432 1 5688999999999888777
Q ss_pred h-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCchh
Q 013273 161 L-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+ +++|+||||||..... ..+++..+++|+.++.++++.+ ++.+.++||++||..+...
T Consensus 68 ~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~vsS~~~~~~----- 142 (270)
T PRK05650 68 AQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFKRQKSGRIVNIASMAGLMQ----- 142 (270)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEECChhhcCC-----
Confidence 6 3689999999964321 1223445778988888876664 5567789999999765332
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceee--cccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL--SQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~--~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++............ .........+++++|+|+.++.
T Consensus 143 -~~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA~~i~~ 221 (270)
T PRK05650 143 -GPAMSSYNVAKAGVVALSETLLVELADDEIGVHVVCPSFFQTNLLDSFRGPNPAMKAQVGKLLEKSPITAADIADYIYQ 221 (270)
T ss_pred -CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccccCcccccccCchhHHHHHHHHhhcCCCCHHHHHHHHHH
Confidence 1334579999998776643 26899999999999887422110000000 0001122356899999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++.+..
T Consensus 222 ~l~~~~ 227 (270)
T PRK05650 222 QVAKGE 227 (270)
T ss_pred HHhCCC
Confidence 998653
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=9.3e-20 Score=175.12 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=152.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+..... ....+. ..++.++.+|++|.+++
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~-~~~~~~---------------~~~~~~~~~Dl~~~~~~ 76 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAE-VAAQLL---------------GGNAKGLVCDVSDSQSV 76 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHH-HHHHhh---------------CCceEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999875422 221111 14577899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ .++|+||||+|..... ..++...+++|+.++.++++++.. .+.++||++||.+.....
T Consensus 77 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~- 155 (255)
T PRK06841 77 EAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAAGGGKIVNLASQAGVVAL- 155 (255)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhcCCceEEEEcchhhccCC-
Confidence 8776 3689999999964321 123344678999999999988754 456799999997653221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...+.+.+ ..|++++.|+||++.++........ ...........+.+.+++|+|+++
T Consensus 156 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~ 230 (255)
T PRK06841 156 -----ERHVAYCASKAGVVGMTKVLALEWGPYGITVNAISPTVVLTELGKKAWAGEKGERAKKLIPAGRFAYPEEIAAAA 230 (255)
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCcCcCcccccccchhHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 234579999999887765 2689999999999987742211000 000001122245678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.+.. ...|+++.+.++.
T Consensus 231 ~~l~~~~~~~~~G~~i~~dgg~ 252 (255)
T PRK06841 231 LFLASDAAAMITGENLVIDGGY 252 (255)
T ss_pred HHHcCccccCccCCEEEECCCc
Confidence 99997653 2357888776653
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.1e-19 Score=173.43 Aligned_cols=216 Identities=16% Similarity=0.146 Sum_probs=152.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++++|+||||+|+||+++++.|+++|++|+++.|+.. ....+.+.+... + .++.++.+|+.|.++
T Consensus 3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~ 69 (245)
T PRK12937 3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAA---------G----GRAIAVQADVADAAA 69 (245)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhc---------C----CeEEEEECCCCCHHH
Confidence 45679999999999999999999999999988887653 333443333321 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~ 221 (446)
++++++ ++|+||||||.... ...+++..+++|+.++.++++++.+. ..++||++||.+....
T Consensus 70 ~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~--- 146 (245)
T PRK12937 70 VTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTSVIALP--- 146 (245)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeeccccCC---
Confidence 888764 68999999996432 12234455789999999999888654 3358999998765332
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|..++.+++. .|+++++++||++.++.......... ..-......+.+.+++|+|++++
T Consensus 147 ---~~~~~~Y~~sK~a~~~~~~~~a~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 223 (245)
T PRK12937 147 ---LPGYGPYAASKAAVEGLVHVLANELRGRGITVNAVAPGPVATELFFNGKSAEQIDQLAGLAPLERLGTPEEIAAAVA 223 (245)
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCccCchhcccCCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 13456799999999987752 58999999999987763110000000 00011122345679999999999
Q ss_pred HHHhCCC-CCCCcEEEEecC
Q 013273 294 CMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++.++. ...++++++.++
T Consensus 224 ~l~~~~~~~~~g~~~~~~~g 243 (245)
T PRK12937 224 FLAGPDGAWVNGQVLRVNGG 243 (245)
T ss_pred HHcCccccCccccEEEeCCC
Confidence 9997653 245788888654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.4e-19 Score=174.13 Aligned_cols=214 Identities=14% Similarity=0.084 Sum_probs=151.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||++++++|+++|++|++++|+.. ..+.+.++.. + .++.++.+|++|.+++
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 70 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEA--PETQAQVEAL---------G----RKFHFITADLIQQKDI 70 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchH--HHHHHHHHHc---------C----CeEEEEEeCCCCHHHH
Confidence 45689999999999999999999999999999988643 2222222221 1 4688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|++|||||.... +..+++..+++|+.++..+++++.+ .+ .++||++||.......
T Consensus 71 ~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 150 (251)
T PRK12481 71 DSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSFQGG 150 (251)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhcCCC
Confidence 8776 468999999996432 2345667789999999988887753 33 3699999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceee--cccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL--SQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~--~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+ .+|++++.|+||++.++............ .......+.+..++|+|+
T Consensus 151 ------~~~~~Y~asK~a~~~l~~~la~e~~~~girvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~peeva~ 224 (251)
T PRK12481 151 ------IRVPSYTASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAG 224 (251)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCCccCchhhcccChHHHHHHHhcCCCCCCcCHHHHHH
Confidence 123469999999987765 37999999999999876321110000000 001112345689999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++.+++.+.. ...|+++.+.++
T Consensus 225 ~~~~L~s~~~~~~~G~~i~vdgg 247 (251)
T PRK12481 225 PAIFLSSSASDYVTGYTLAVDGG 247 (251)
T ss_pred HHHHHhCccccCcCCceEEECCC
Confidence 9999997633 345677766554
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=175.63 Aligned_cols=216 Identities=12% Similarity=0.132 Sum_probs=149.5
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++++++|||||++ +||++++++|+++|++|++.+|+....+.+.+..+.. +...++.+|++|.+
T Consensus 5 l~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~--------------g~~~~~~~Dv~d~~ 70 (271)
T PRK06505 5 MQGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESL--------------GSDFVLPCDVEDIA 70 (271)
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhc--------------CCceEEeCCCCCHH
Confidence 4678999999997 9999999999999999999998754333222211111 22357899999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +.+|++|||||.... +..++...+++|+.++.++++++... .-++||++||.+..
T Consensus 71 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~~G~Iv~isS~~~~ 150 (271)
T PRK06505 71 SVDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPDGGSMLTLTYGGST 150 (271)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhccCceEEEEcCCCcc
Confidence 887765 568999999996421 22345566889999999998887542 22589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~-~~~~~~~~~~~~v~~~D 287 (446)
.. ...+..|+.+|+..+.+.+ .+|++++.|.||++.++........ .. .........+.+..++|
T Consensus 151 ~~------~~~~~~Y~asKaAl~~l~r~la~el~~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 224 (271)
T PRK06505 151 RV------MPNYNVMGVAKAALEASVRYLAADYGPQGIRVNAISAGPVRTLAGAGIGDARAIFSYQQRNSPLRRTVTIDE 224 (271)
T ss_pred cc------CCccchhhhhHHHHHHHHHHHHHHHhhcCeEEEEEecCCccccccccCcchHHHHHHHhhcCCccccCCHHH
Confidence 21 1234579999999987765 3789999999999987632110000 00 00011122345678999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...++++.+.++.
T Consensus 225 va~~~~fL~s~~~~~itG~~i~vdgG~ 251 (271)
T PRK06505 225 VGGSALYLLSDLSSGVTGEIHFVDSGY 251 (271)
T ss_pred HHHHHHHHhCccccccCceEEeecCCc
Confidence 9999999997643 2457777776653
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.2e-19 Score=173.97 Aligned_cols=217 Identities=13% Similarity=0.119 Sum_probs=157.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||++++++|+++|++|+++.|+.++...+.+.++.. + .++.++.+|++|.+++
T Consensus 8 ~~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 74 (265)
T PRK07097 8 LKGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYREL---------G----IEAHGYVCDVTDEDGV 74 (265)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEcCCCCHHHH
Confidence 46689999999999999999999999999999999988776665544321 1 4688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +.+|+||||||.... ...++...+++|+.++..+++++. +.+.++||++||..... +
T Consensus 75 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~-~- 152 (265)
T PRK07097 75 QAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKKGHGKIINICSMMSEL-G- 152 (265)
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCcEEEEEcCccccC-C-
Confidence 8776 358999999996432 223345557789999988877764 34667999999975432 2
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----cceeec---ccCcccCCccCH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNITLS---QEDTLFGGQVSN 285 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~~~~~~---~~~~~~~~~v~~ 285 (446)
...+..|+.+|..++.+++ ..|++++.|+||++.++....... ...... ......+.+..+
T Consensus 153 ----~~~~~~Y~~sKaal~~l~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (265)
T PRK07097 153 ----RETVSAYAAAKGGLKMLTKNIASEYGEANIQCNGIGPGYIATPQTAPLRELQADGSRHPFDQFIIAKTPAARWGDP 228 (265)
T ss_pred ----CCCCccHHHHHHHHHHHHHHHHHHhhhcCceEEEEEeccccccchhhhhhccccccchhHHHHHHhcCCccCCcCH
Confidence 1335679999999988775 268999999999998874211100 000000 011123456789
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+|+.++.++.+.. ...++++.+.++.
T Consensus 229 ~dva~~~~~l~~~~~~~~~g~~~~~~gg~ 257 (265)
T PRK07097 229 EDLAGPAVFLASDASNFVNGHILYVDGGI 257 (265)
T ss_pred HHHHHHHHHHhCcccCCCCCCEEEECCCc
Confidence 999999999998742 3467777776654
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.7e-20 Score=174.44 Aligned_cols=214 Identities=14% Similarity=0.128 Sum_probs=146.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++||||+||||+++++.|+++|++|+++ .|+.++...+...++.. + .++.++.+|+.|.+++++
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~d~~~i~~ 68 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQA---------G----GKAFVLQADISDENQVVA 68 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhC---------C----CeEEEEEccCCCHHHHHH
Confidence 589999999999999999999999999874 56666555554444321 1 468899999999998888
Q ss_pred Hhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC-------CCCEEEEEccccccCC
Q 013273 160 ALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~-------~v~r~V~vSS~~~~~~ 218 (446)
+++ .+|+||||+|.... ...++...+++|+.++.++++++... ..++||++||......
T Consensus 69 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~ 148 (247)
T PRK09730 69 MFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLG 148 (247)
T ss_pred HHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccC
Confidence 763 57999999996421 11123356889999998887776432 2357999999755322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceee-cccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL-SQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~-~~~~~~~~~~v~~~DvA~ 290 (446)
.. ..+..|+.+|..+|.+++ ..|++++++|||++|++............ ...........+++|+|+
T Consensus 149 ~~-----~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 223 (247)
T PRK09730 149 AP-----GEYVDYAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMHASGGEPGRVDRVKSNIPMQRGGQPEEVAQ 223 (247)
T ss_pred CC-----CcccchHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCcccccCCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 11 112359999999987765 25899999999999998532111000000 001111222358999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.+.. ...+++|++.++
T Consensus 224 ~~~~~~~~~~~~~~g~~~~~~g~ 246 (247)
T PRK09730 224 AIVWLLSDKASYVTGSFIDLAGG 246 (247)
T ss_pred HHHhhcChhhcCccCcEEecCCC
Confidence 9999997642 245677777654
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.5e-19 Score=172.71 Aligned_cols=215 Identities=17% Similarity=0.153 Sum_probs=147.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++||||+|+||+++++.|+++|++|+++.+ +........++++.. + .++.++.+|+.|.+++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 68 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKAL---------G----FDFIASEGNVGDWDST 68 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHHH
Confidence 4578999999999999999999999999988654 333333333333221 1 4678889999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
.+++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 69 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~-- 146 (246)
T PRK12938 69 KAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG-- 146 (246)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEEechhccCC--
Confidence 7765 468999999996432 22334556789999977766665 4456779999999754322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++.........+..............++|++++++
T Consensus 147 ----~~~~~~y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (246)
T PRK12938 147 ----QFGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSIVA 222 (246)
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEecccCCchhhhcChHHHHHHHhcCCccCCcCHHHHHHHHH
Confidence 1234579999998877654 36899999999999987422110000000001112234578999999999
Q ss_pred HHHhCCC-CCCCcEEEEecC
Q 013273 294 CMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++.++. ...++++.+.++
T Consensus 223 ~l~~~~~~~~~g~~~~~~~g 242 (246)
T PRK12938 223 WLASEESGFSTGADFSLNGG 242 (246)
T ss_pred HHcCcccCCccCcEEEECCc
Confidence 9997643 346778877654
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.8e-19 Score=177.37 Aligned_cols=218 Identities=13% Similarity=0.099 Sum_probs=154.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+++++||||||+|+||+++++.|+++|++|++++|+... ...+.+.++.. + .++.++.+|+.|.+
T Consensus 43 ~~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~ 109 (290)
T PRK06701 43 KLKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKE---------G----VKCLLIPGDVSDEA 109 (290)
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---------C----CeEEEEEccCCCHH
Confidence 3456899999999999999999999999999999998643 33333222211 1 46889999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~ 219 (446)
.+.+++ .++|+||||||.... +..++...+++|+.++.++++++.+. ..++||++||..+....
T Consensus 110 ~~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~~~~~ 189 (290)
T PRK06701 110 FCKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITGYEGN 189 (290)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccccCCC
Confidence 887776 368999999985321 11233456889999999999998753 23589999997763321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-eeecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~~v~~~DvA~a 291 (446)
..+..|+.+|...+.+++ ..|++++.|+||+++++......... ..........+.+.+++|+|++
T Consensus 190 ------~~~~~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 263 (290)
T PRK06701 190 ------ETLIDYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPLIPSDFDEEKVSQFGSNTPMQRPGQPEELAPA 263 (290)
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcccccccCHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 223469999999987765 25899999999999987421100000 0000111223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...+.+|++.++.
T Consensus 264 ~~~ll~~~~~~~~G~~i~idgg~ 286 (290)
T PRK06701 264 YVFLASPDSSYITGQMLHVNGGV 286 (290)
T ss_pred HHHHcCcccCCccCcEEEeCCCc
Confidence 999998753 2357888887653
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=173.34 Aligned_cols=213 Identities=16% Similarity=0.151 Sum_probs=148.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|+||||+|+||++++++|+++|++|++++|+.+....+.+++ + .++.++++|+.|.+++
T Consensus 4 ~~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~~ 67 (249)
T PRK06500 4 LQGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAEL------------G----ESALVIRADAGDVAAQ 67 (249)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHh------------C----CceEEEEecCCCHHHH
Confidence 34679999999999999999999999999999999876655443321 1 4688899999998776
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
..++ +++|+||||||.... +..+++..+++|+.++.++++++... ...++|++||.... ++.
T Consensus 68 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~i~~~S~~~~-~~~-- 144 (249)
T PRK06500 68 KALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLANPASIVLNGSINAH-IGM-- 144 (249)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechHhc-cCC--
Confidence 6554 468999999986432 22334556889999999999999752 23578888885442 221
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce---ee--cccCcccCCccCHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI---TL--SQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~---~~--~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...|.+++ ..|++++++|||.++++...... .... .. .........+.+++|+|
T Consensus 145 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 221 (249)
T PRK06500 145 ---PNSSVYAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPLYGKLGLPEATLDAVAAQIQALVPLGRFGTPEEIA 221 (249)
T ss_pred ---CCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHHHHhhccCccchHHHHHHHHhcCCCCCCcCHHHHH
Confidence 234579999999998874 25899999999999987321100 0000 00 00011123457899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.+.. ...+..+.+.++
T Consensus 222 ~~~~~l~~~~~~~~~g~~i~~~gg 245 (249)
T PRK06500 222 KAVLYLASDESAFIVGSEIIVDGG 245 (249)
T ss_pred HHHHHHcCccccCccCCeEEECCC
Confidence 99999987643 234666666554
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=173.56 Aligned_cols=217 Identities=12% Similarity=0.100 Sum_probs=156.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|+||||+|+||+++++.|+++|++|++++|+.+....+.+.++.. + .++.++.+|++|.+++
T Consensus 5 l~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~i 71 (253)
T PRK06172 5 FSGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREA---------G----GEALFVACDVTRDAEV 71 (253)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEcCCCCHHHH
Confidence 45689999999999999999999999999999999988766655544332 1 5689999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
.+++ +.+|+||||+|.... ...+++..+++|+.+..++++++. +.+.++||++||......
T Consensus 72 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~sS~~~~~~- 150 (253)
T PRK06172 72 KALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLMLAQGGGAIVNTASVAGLGA- 150 (253)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEECchhhccC-
Confidence 7765 357999999996321 122345567899999988776553 455679999999765332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--ccee-ecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNIT-LSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~~~~-~~~~~~~~~~~v~~~DvA 289 (446)
...+..|+.+|...+.+.+ ..|+++++|+||++.++....... .... ........+....++|+|
T Consensus 151 -----~~~~~~Y~~sKaa~~~~~~~la~e~~~~~i~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ia 225 (253)
T PRK06172 151 -----APKMSIYAASKHAVIGLTKSAAIEYAKKGIRVNAVCPAVIDTDMFRRAYEADPRKAEFAAAMHPVGRIGKVEEVA 225 (253)
T ss_pred -----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhcccChHHHHHHhccCCCCCccCHHHHH
Confidence 1335579999999988765 258999999999998764211100 0000 000112234567899999
Q ss_pred HHHHHHHhCC-CCCCCcEEEEecCC
Q 013273 290 ELLACMAKNR-SLSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~-~~~~~~v~ni~~~~ 313 (446)
+.+++++.+. ....|+++++.++.
T Consensus 226 ~~~~~l~~~~~~~~~G~~i~~dgg~ 250 (253)
T PRK06172 226 SAVLYLCSDGASFTTGHALMVDGGA 250 (253)
T ss_pred HHHHHHhCccccCcCCcEEEECCCc
Confidence 9999999864 33568888887764
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=171.72 Aligned_cols=209 Identities=15% Similarity=0.083 Sum_probs=151.9
Q ss_pred EEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc-
Q 013273 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG- 162 (446)
Q Consensus 84 lVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~- 162 (446)
|||||+|+||+++++.|+++|++|++++|+.++...+.+.++. ..+++++.+|++|.+++.++++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dl~~~~~~~~~~~~ 66 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGG--------------GAPVRTAALDITDEAAVDAFFAE 66 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhc--------------CCceEEEEccCCCHHHHHHHHHh
Confidence 6999999999999999999999999999997766554433321 1568899999999999998885
Q ss_pred --CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 163 --NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 163 --~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
.+|+||||+|.... +..++...+++|+.++.+++++....+.++||++||.+.... ..+...|+.+
T Consensus 67 ~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~g~iv~~ss~~~~~~------~~~~~~Y~~s 140 (230)
T PRK07041 67 AGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIAPGGSLTFVSGFAAVRP------SASGVLQGAI 140 (230)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhcCCeEEEEECchhhcCC------CCcchHHHHH
Confidence 47999999996432 122345567899999999999666556679999999876432 1345579999
Q ss_pred HHHHHHHHHh-----CCCCEEEEecCCccCCCccccccc---cee-ecccCcccCCccCHHHHHHHHHHHHhCCCCCCCc
Q 013273 235 KRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETH---NIT-LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK 305 (446)
Q Consensus 235 K~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~~~---~~~-~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~ 305 (446)
|...+.+++. .+++++.++||++.++........ ... ........+....++|+|++++.++.+.. ..++
T Consensus 141 K~a~~~~~~~la~e~~~irv~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~~~~~-~~G~ 219 (230)
T PRK07041 141 NAALEALARGLALELAPVRVNTVSPGLVDTPLWSKLAGDAREAMFAAAAERLPARRVGQPEDVANAILFLAANGF-TTGS 219 (230)
T ss_pred HHHHHHHHHHHHHHhhCceEEEEeecccccHHHHhhhccchHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhcCCC-cCCc
Confidence 9999988763 368999999999876532110000 000 00001112234678999999999998653 5688
Q ss_pred EEEEecCC
Q 013273 306 VVEVIAET 313 (446)
Q Consensus 306 v~ni~~~~ 313 (446)
+|++.++.
T Consensus 220 ~~~v~gg~ 227 (230)
T PRK07041 220 TVLVDGGH 227 (230)
T ss_pred EEEeCCCe
Confidence 99988764
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=172.41 Aligned_cols=216 Identities=16% Similarity=0.173 Sum_probs=147.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch----hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~----~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+.+++++||||+|+||+++++.|+++|++|+++.++.. ....+.+.++.. + .++.++.+|++|
T Consensus 6 l~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~ 72 (257)
T PRK12744 6 LKGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAA---------G----AKAVAFQADLTT 72 (257)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHh---------C----CcEEEEecCcCC
Confidence 45689999999999999999999999999877776432 223333222221 1 468899999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEE-ccccccC
Q 013273 154 RVQIEPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMV-SSLGTNK 217 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~v-SS~~~~~ 217 (446)
.+++++++ +++|+||||||... ....+++..+++|+.++..+++++.+. ..+++|++ ||....
T Consensus 73 ~~~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~iv~~~ss~~~~- 151 (257)
T PRK12744 73 AAAVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRHLNDNGKIVTLVTSLLGA- 151 (257)
T ss_pred HHHHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHhhccCCCEEEEecchhcc-
Confidence 99888776 36899999999632 122235566889999999999998754 22467766 443221
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccc---eee-cccCcc--cCCccC
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHN---ITL-SQEDTL--FGGQVS 284 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~---~~~-~~~~~~--~~~~v~ 284 (446)
+. ..+..|+.+|+..|.+.+. .|+++++++||++.++......... ... ...... ..++.+
T Consensus 152 ~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (257)
T PRK12744 152 FT------PFYSAYAGSKAPVEHFTRAASKEFGARGISVTAVGPGPMDTPFFYPQEGAEAVAYHKTAAALSPFSKTGLTD 225 (257)
T ss_pred cC------CCcccchhhHHHHHHHHHHHHHHhCcCceEEEEEecCccccchhccccccchhhcccccccccccccCCCCC
Confidence 11 2245799999999988762 4799999999999876321100000 000 001111 125789
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
++|+|+++++++.+.....++++++.++.
T Consensus 226 ~~dva~~~~~l~~~~~~~~g~~~~~~gg~ 254 (257)
T PRK12744 226 IEDIVPFIRFLVTDGWWITGQTILINGGY 254 (257)
T ss_pred HHHHHHHHHHhhcccceeecceEeecCCc
Confidence 99999999999986433357888887663
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=171.57 Aligned_cols=214 Identities=16% Similarity=0.137 Sum_probs=149.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++||||+|+||+++++.|+++|++|++++|+.. ....+..... ....++.++.+|+.|.+++.+
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~-------------~~~~~~~~~~~D~~~~~~v~~ 69 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYG-------------FTEDQVRLKELDVTDTEECAE 69 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhh-------------ccCCeEEEEEcCCCCHHHHHH
Confidence 58999999999999999999999999999999864 1111111110 012568999999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ ..+|+||||+|.... +..+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 70 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~iss~~~~~~---- 145 (245)
T PRK12824 70 ALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMCEQGYGRIINISSVNGLKG---- 145 (245)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCeEEEEECChhhccC----
Confidence 66 358999999986422 22234455788999998886555 5556779999999765322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
......|..+|...+.+++ ..|+++++++||++.++...................+.+..++|+++++.++
T Consensus 146 --~~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~l 223 (245)
T PRK12824 146 --QFGQTNYSAAKAGMIGFTKALASEGARYGITVNCIAPGYIATPMVEQMGPEVLQSIVNQIPMKRLGTPEEIAAAVAFL 223 (245)
T ss_pred --CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEEcccCCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHHHH
Confidence 1234579999998876654 3689999999999988742211110000001112234567899999999999
Q ss_pred HhCCC-CCCCcEEEEecCC
Q 013273 296 AKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~ 313 (446)
+.... ...|+++++.++.
T Consensus 224 ~~~~~~~~~G~~~~~~~g~ 242 (245)
T PRK12824 224 VSEAAGFITGETISINGGL 242 (245)
T ss_pred cCccccCccCcEEEECCCe
Confidence 86532 2468899888774
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.8e-19 Score=174.07 Aligned_cols=206 Identities=14% Similarity=0.097 Sum_probs=149.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.... .++.++.+|++|.+++
T Consensus 4 l~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~------------------------~~~~~~~~D~~~~~~i 59 (258)
T PRK06398 4 LKDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSY------------------------NDVDYFKVDVSNKEQV 59 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCcccc------------------------CceEEEEccCCCHHHH
Confidence 4568999999999999999999999999999999986421 3588999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++.+ .+.++||++||......
T Consensus 60 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-- 137 (258)
T PRK06398 60 IKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQDKGVIINIASVQSFAV-- 137 (258)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeCcchhccC--
Confidence 8776 368999999996422 2233455678999999999888753 45679999999766332
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccc------ccc-e----eecccCcccCCcc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE------THN-I----TLSQEDTLFGGQV 283 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~------~~~-~----~~~~~~~~~~~~v 283 (446)
...+..|+.+|...+.+.+. .++++++|+||++.++...... ... . .........+...
T Consensus 138 ----~~~~~~Y~~sKaal~~~~~~la~e~~~~i~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (258)
T PRK06398 138 ----TRNAAAYVTSKHAVLGLTRSIAVDYAPTIRCVAVCPGSIRTPLLEWAAELEVGKDPEHVERKIREWGEMHPMKRVG 213 (258)
T ss_pred ----CCCCchhhhhHHHHHHHHHHHHHHhCCCCEEEEEecCCccchHHhhhhhccccCChhhhHHHHHhhhhcCCcCCCc
Confidence 13456799999999988762 3499999999999776311100 000 0 0000112234567
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.++|+|+++++++.+.. ...++++.+.++.
T Consensus 214 ~p~eva~~~~~l~s~~~~~~~G~~i~~dgg~ 244 (258)
T PRK06398 214 KPEEVAYVVAFLASDLASFITGECVTVDGGL 244 (258)
T ss_pred CHHHHHHHHHHHcCcccCCCCCcEEEECCcc
Confidence 89999999999997643 2457777776654
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.4e-19 Score=172.75 Aligned_cols=213 Identities=15% Similarity=0.134 Sum_probs=149.6
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++++++||||+ ++||++++++|+++|++|++.+|+. +.... ++++ . ..++.++++|++|.+
T Consensus 5 l~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~-~~~~~---~~~~--------~----~~~~~~~~~Dl~~~~ 68 (252)
T PRK06079 5 LSGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQND-RMKKS---LQKL--------V----DEEDLLVECDVASDE 68 (252)
T ss_pred cCCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCch-HHHHH---HHhh--------c----cCceeEEeCCCCCHH
Confidence 467899999999 7999999999999999999999983 32222 2221 0 146889999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|++|||||.... +..+++..+++|+.+...+++++... ..+++|++||.+..
T Consensus 69 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~ 148 (252)
T PRK06079 69 SIERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLNPGASIVTLTYFGSE 148 (252)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcccCceEEEEeccCcc
Confidence 887765 568999999996421 22335566889999999998888653 23589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcc-cccccce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA-YKETHNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~-~~~~~~~-~~~~~~~~~~~~v~~~D 287 (446)
.. ...+..|+.+|...+.+.+ ..|++++.|.||.+.++... ....... .........+.+..++|
T Consensus 149 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 222 (252)
T PRK06079 149 RA------IPNYNVMGIAKAALESSVRYLARDLGKKGIRVNAISAGAVKTLAVTGIKGHKDLLKESDSRTVDGVGVTIEE 222 (252)
T ss_pred cc------CCcchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccccccccCCChHHHHHHHHhcCcccCCCCHHH
Confidence 22 1234579999999988765 36899999999999876311 1000000 00011122345789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
||+++++++.+.. ...++++.+.++
T Consensus 223 va~~~~~l~s~~~~~itG~~i~vdgg 248 (252)
T PRK06079 223 VGNTAAFLLSDLSTGVTGDIIYVDKG 248 (252)
T ss_pred HHHHHHHHhCcccccccccEEEeCCc
Confidence 9999999997643 345677766554
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.5e-19 Score=174.47 Aligned_cols=197 Identities=17% Similarity=0.034 Sum_probs=143.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+. ..+++++.+|+.|.+++.+
T Consensus 1 mk~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~---------------~~~~~~~~~D~~~~~~v~~ 65 (260)
T PRK08267 1 MKSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELG---------------AGNAWTGALDVTDRAAWDA 65 (260)
T ss_pred CcEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhc---------------CCceEEEEecCCCHHHHHH
Confidence 4689999999999999999999999999999999887666544321 1478999999999988887
Q ss_pred Hhc--------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 160 ALG--------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~~--------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++. ++|+||||||..... ..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 66 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~-- 143 (260)
T PRK08267 66 ALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKATPGARVINTSSASAIYGQ-- 143 (260)
T ss_pred HHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCC--
Confidence 653 569999999964321 22345568899999999988874 3456799999997542211
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...+.+++ ..|+++++|+||++.++.... .............+..+.++|+|++++.
T Consensus 144 ----~~~~~Y~~sKaa~~~~~~~l~~~~~~~~i~v~~i~pg~~~t~~~~~--~~~~~~~~~~~~~~~~~~~~~va~~~~~ 217 (260)
T PRK08267 144 ----PGLAVYSATKFAVRGLTEALDLEWRRHGIRVADVMPLFVDTAMLDG--TSNEVDAGSTKRLGVRLTPEDVAEAVWA 217 (260)
T ss_pred ----CCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCcCCccccc--ccchhhhhhHhhccCCCCHHHHHHHHHH
Confidence 224579999999887765 258999999999997653211 0000000001112235788999999999
Q ss_pred HHhCC
Q 013273 295 MAKNR 299 (446)
Q Consensus 295 ll~~~ 299 (446)
++.+.
T Consensus 218 ~~~~~ 222 (260)
T PRK08267 218 AVQHP 222 (260)
T ss_pred HHhCC
Confidence 99754
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=170.92 Aligned_cols=193 Identities=17% Similarity=0.142 Sum_probs=143.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
||+|+||||+|+||++++++|+++|++|++++|+.++...+.+.+... ...+++++++|+.|.+++++
T Consensus 1 ~~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~~~~~~~~ 68 (243)
T PRK07102 1 MKKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRAR------------GAVAVSTHELDILDTASHAA 68 (243)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHh------------cCCeEEEEecCCCChHHHHH
Confidence 468999999999999999999999999999999988776655444321 12579999999999998887
Q ss_pred Hhc----CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCchhhh
Q 013273 160 ALG----NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAIL 225 (446)
Q Consensus 160 a~~----~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~~~~~~ 225 (446)
+++ .+|+||||+|.... +..++...+++|+.++.++++++.. .+.++||++||...... .
T Consensus 69 ~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~-~----- 142 (243)
T PRK07102 69 FLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEARGSGTIVGISSVAGDRG-R----- 142 (243)
T ss_pred HHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCEEEEEecccccCC-C-----
Confidence 764 46999999985322 1122234578899999999888753 46789999999754221 1
Q ss_pred chhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.....|+.+|...+.+.+ +.|+++++|+||+++++.... .. ......++++|+|+.++.++.+
T Consensus 143 ~~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~v~t~~~~~-----~~-----~~~~~~~~~~~~a~~i~~~~~~ 212 (243)
T PRK07102 143 ASNYVYGSAKAALTAFLSGLRNRLFKSGVHVLTVKPGFVRTPMTAG-----LK-----LPGPLTAQPEEVAKDIFRAIEK 212 (243)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhccCcEEEEEecCcccChhhhc-----cC-----CCccccCCHHHHHHHHHHHHhC
Confidence 223469999998877654 368999999999999873211 00 0112357899999999999987
Q ss_pred CC
Q 013273 299 RS 300 (446)
Q Consensus 299 ~~ 300 (446)
+.
T Consensus 213 ~~ 214 (243)
T PRK07102 213 GK 214 (243)
T ss_pred CC
Confidence 54
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.7e-19 Score=169.91 Aligned_cols=211 Identities=16% Similarity=0.187 Sum_probs=147.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|+++|++|+++.|+ .+..+.+.+. .++.++.+|++|.++
T Consensus 4 ~~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~------------------~~~~~~~~D~~~~~~ 65 (237)
T PRK12742 4 FTGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQE------------------TGATAVQTDSADRDA 65 (237)
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHH------------------hCCeEEecCCCCHHH
Confidence 456799999999999999999999999999888764 3333332211 235678899999888
Q ss_pred HHHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhh
Q 013273 157 IEPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAIL 225 (446)
Q Consensus 157 ~~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~ 225 (446)
+.+++ +++|+||||||.... +..+++..+++|+.++.++++.+.+. ..++||++||....... .
T Consensus 66 ~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~~~~-----~ 140 (237)
T PRK12742 66 VIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNGDRMP-----V 140 (237)
T ss_pred HHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEeccccccCC-----C
Confidence 87766 458999999986421 22335567889999999998777653 34699999997652211 2
Q ss_pred chhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.....|+.+|+..|.+++ ..|+++++|+||.+.++....... ...........+.+.+++|+|+++.+++.+
T Consensus 141 ~~~~~Y~~sKaa~~~~~~~la~~~~~~gi~v~~v~Pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 141 AGMAAYAASKSALQGMARGLARDFGPRGITINVVQPGPIDTDANPANGP-MKDMMHSFMAIKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred CCCcchHHhHHHHHHHHHHHHHHHhhhCeEEEEEecCcccCCccccccH-HHHHHHhcCCCCCCCCHHHHHHHHHHHcCc
Confidence 345679999999997765 368999999999998764211000 000000111234568999999999999976
Q ss_pred CC-CCCCcEEEEecC
Q 013273 299 RS-LSYCKVVEVIAE 312 (446)
Q Consensus 299 ~~-~~~~~v~ni~~~ 312 (446)
.. ...|.++.+.++
T Consensus 220 ~~~~~~G~~~~~dgg 234 (237)
T PRK12742 220 EASFVTGAMHTIDGA 234 (237)
T ss_pred ccCcccCCEEEeCCC
Confidence 53 235677766544
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=5.5e-19 Score=169.03 Aligned_cols=194 Identities=16% Similarity=0.168 Sum_probs=144.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++++||||+|+||+++++.|+++|++|++++|+.++...+.+.+... ....+++++.+|++|.+++.+
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~~~~ 70 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLAR-----------YPGIKVAVAALDVNDHDQVFE 70 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEEcCCCCHHHHHH
Confidence 468999999999999999999999999999999988777665544321 112478999999999988876
Q ss_pred Hh-------cCCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ +++|+||||||...... ..+...+++|+.+..++++++. +.+.++||++||...... .+
T Consensus 71 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-~~- 148 (248)
T PRK08251 71 VFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFREQGSGHLVLISSVSAVRG-LP- 148 (248)
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeccccccC-CC-
Confidence 65 46899999999643321 1223457799999998888764 456789999999755321 11
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.+...|+.+|...+.+.+ ..++++++|+||++.++...... . ....++.+|+|+.++.+
T Consensus 149 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~v~t~~~~~~~---------~--~~~~~~~~~~a~~i~~~ 214 (248)
T PRK08251 149 ---GVKAAYAASKAGVASLGEGLRAELAKTPIKVSTIEPGYIRSEMNAKAK---------S--TPFMVDTETGVKALVKA 214 (248)
T ss_pred ---CCcccHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcCcchhhhccc---------c--CCccCCHHHHHHHHHHH
Confidence 234579999999887664 25899999999999876321100 0 11258899999999999
Q ss_pred HhCCC
Q 013273 296 AKNRS 300 (446)
Q Consensus 296 l~~~~ 300 (446)
+++..
T Consensus 215 ~~~~~ 219 (248)
T PRK08251 215 IEKEP 219 (248)
T ss_pred HhcCC
Confidence 98654
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.6e-19 Score=171.03 Aligned_cols=188 Identities=14% Similarity=0.137 Sum_probs=142.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++++||||+|+||+++++.|+++|++|++++|+.++.+++.+. + .++.++.+|++|.+++++
T Consensus 1 ~~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-------------~----~~~~~~~~D~~~~~~~~~ 63 (240)
T PRK06101 1 MTAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQ-------------S----ANIFTLAFDVTDHPGTKA 63 (240)
T ss_pred CcEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHh-------------c----CCCeEEEeeCCCHHHHHH
Confidence 36899999999999999999999999999999998765544321 1 468899999999999998
Q ss_pred HhcC----CCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhch
Q 013273 160 ALGN----ASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNL 227 (446)
Q Consensus 160 a~~~----~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~ 227 (446)
+++. .|.+|||||.... +..+++..+++|+.++.++++++... +.++||++||...... ...
T Consensus 64 ~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv~isS~~~~~~------~~~ 137 (240)
T PRK06101 64 ALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSCGHRVVIVGSIASELA------LPR 137 (240)
T ss_pred HHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCeEEEEechhhccC------CCC
Confidence 8854 5899999985321 11223456889999999999998763 3358999999654322 123
Q ss_pred hhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 228 FWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
...|+.+|..++.+.+ .+|++++++|||+++++..... .. .....+.++|+|+.++..++...
T Consensus 138 ~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~pg~i~t~~~~~~---~~-------~~~~~~~~~~~a~~i~~~i~~~~ 207 (240)
T PRK06101 138 AEAYGASKAAVAYFARTLQLDLRPKGIEVVTVFPGFVATPLTDKN---TF-------AMPMIITVEQASQEIRAQLARGK 207 (240)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhcCceEEEEeCCcCCCCCcCCC---CC-------CCCcccCHHHHHHHHHHHHhcCC
Confidence 4479999999998754 4799999999999998742110 00 01124789999999999998754
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.2e-19 Score=171.01 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=156.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+... ....++.++.+|+.|.+++
T Consensus 7 ~~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~~~~~~ 75 (257)
T PRK09242 7 LDGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEE-----------FPEREVHGLAADVSDDEDR 75 (257)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh-----------CCCCeEEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999987776665554321 1125788999999998877
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||+|.... +..+++..+.+|+.++.++++++. +.+.++||++||.......
T Consensus 76 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~ii~~sS~~~~~~~- 154 (257)
T PRK09242 76 RAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQHASSAIVNIGSVSGLTHV- 154 (257)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCceEEEECccccCCCC-
Confidence 6655 468999999996321 233455668899999999988874 3556799999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-ccccee-ecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT-LSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~-~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+++ ..|++++.|+||++.++..... ...... ........+.+...+|++++
T Consensus 155 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~ 229 (257)
T PRK09242 155 -----RSGAPYGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLTSGPLSDPDYYEQVIERTPMRRVGEPEEVAAA 229 (257)
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCcccccccCChHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 234569999999988765 3689999999999988743211 000000 00011122345688999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+..++.+.. ...++++.+.++
T Consensus 230 ~~~l~~~~~~~~~g~~i~~~gg 251 (257)
T PRK09242 230 VAFLCMPAASYITGQCIAVDGG 251 (257)
T ss_pred HHHHhCcccccccCCEEEECCC
Confidence 999997542 235777777554
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=172.01 Aligned_cols=216 Identities=15% Similarity=0.140 Sum_probs=153.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++|+||||+|+||+++++.|+++|++|++++|+.++.+.+...+... ..++.++.+|+++.+++
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~D~~~~~~~ 73 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAE-------------GGAAHVVSLDVTDYQSI 73 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777665544321 14688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC--------CCEEEEEcc
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK--------VNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--------v~r~V~vSS 212 (446)
.++++ ++|+||||+|.... ...++...+++|+.++.++++++.. .. .++||++||
T Consensus 74 ~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS 153 (258)
T PRK06949 74 KAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIAS 153 (258)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECc
Confidence 87764 68999999995321 1223455688999999999887752 21 358999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccC
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~ 284 (446)
...... ......|+.+|...+.+++ ..|+++++|+||+++++..... ..............+.+..
T Consensus 154 ~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (258)
T PRK06949 154 VAGLRV------LPQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEINHHHWETEQGQKLVSMLPRKRVGK 227 (258)
T ss_pred ccccCC------CCCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcchhccChHHHHHHHhcCCCCCCcC
Confidence 765322 1234579999998887765 2689999999999998853211 0000000001111234677
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.+|+++++.+++.+.. ...|.++.+.++
T Consensus 228 p~~~~~~~~~l~~~~~~~~~G~~i~~dgg 256 (258)
T PRK06949 228 PEDLDGLLLLLAADESQFINGAIISADDG 256 (258)
T ss_pred HHHHHHHHHHHhChhhcCCCCcEEEeCCC
Confidence 8999999999987543 245666665543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.3e-19 Score=172.44 Aligned_cols=202 Identities=15% Similarity=0.131 Sum_probs=142.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||+++++.|+++|++|++++|+......+.+..... ..++.++.+|+.|.+++.+
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~ 68 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARR-------------GLALRVEKLDLTDAIDRAQ 68 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcceEEEeeCCCHHHHHH
Confidence 468999999999999999999999999999999987665554433221 1468999999999999998
Q ss_pred Hhc-CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCchhhhchh
Q 013273 160 ALG-NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAILNLF 228 (446)
Q Consensus 160 a~~-~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~~~~~~~ 228 (446)
++. ++|+||||||..... ..+++..+++|+.++.++.+.+ ++.+.++||++||.+..... ...
T Consensus 69 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~~------~~~ 142 (257)
T PRK09291 69 AAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGKGKVVFTSSMAGLITG------PFT 142 (257)
T ss_pred HhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEcChhhccCC------CCc
Confidence 886 899999999964321 1123345778888877766544 45667899999997553221 224
Q ss_pred hHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-cccccee-------ec-ccCcccCCccCHHHHHHHH
Q 013273 229 WGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNIT-------LS-QEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~~~-------~~-~~~~~~~~~v~~~DvA~ai 292 (446)
..|+.+|..+|.+.+ ..|+++++||||++..+.... ....... +. .......++++.+|+++.+
T Consensus 143 ~~Y~~sK~a~~~~~~~l~~~~~~~gi~~~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (257)
T PRK09291 143 GAYCASKHALEAIAEAMHAELKPFGIQVATVNPGPYLTGFNDTMAETPKRWYDPARNFTDPEDLAFPLEQFDPQEMIDAM 222 (257)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccccchhhhhhhhhhhcchhhHHHhhhhhhccccCCCHHHHHHHH
Confidence 579999999987653 379999999999986542110 0000000 00 0011223558899999999
Q ss_pred HHHHhCCC
Q 013273 293 ACMAKNRS 300 (446)
Q Consensus 293 ~~ll~~~~ 300 (446)
+.++.++.
T Consensus 223 ~~~l~~~~ 230 (257)
T PRK09291 223 VEVIPADT 230 (257)
T ss_pred HHHhcCCC
Confidence 99887654
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.3e-19 Score=174.12 Aligned_cols=209 Identities=14% Similarity=0.094 Sum_probs=151.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.. .+ .++.++.+|+.|.+++
T Consensus 4 ~~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~~~-----------------~~----~~~~~~~~D~~~~~~~ 62 (252)
T PRK07856 4 LTGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPETV-----------------DG----RPAEFHAADVRDPDQV 62 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhhhh-----------------cC----CceEEEEccCCCHHHH
Confidence 45789999999999999999999999999999999875400 01 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... ...+++..+++|+.++.++++++.. .+.++||++||.......
T Consensus 63 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~ 142 (252)
T PRK07856 63 AALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVSGRRPS 142 (252)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccccCCCC
Confidence 8776 357999999996432 1123445688999999999998854 234699999997663321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccc--cccceeecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~--~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...|.+++. ..++++.|+||.+.++..... ..............+.+..++|+|++
T Consensus 143 ------~~~~~Y~~sK~a~~~l~~~la~e~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~va~~ 216 (252)
T PRK07856 143 ------PGTAAYGAAKAGLLNLTRSLAVEWAPKVRVNAVVVGLVRTEQSELHYGDAEGIAAVAATVPLGRLATPADIAWA 216 (252)
T ss_pred ------CCCchhHHHHHHHHHHHHHHHHHhcCCeEEEEEEeccccChHHhhhccCHHHHHHHhhcCCCCCCcCHHHHHHH
Confidence 2345799999999988762 238999999999987732110 00000000111223456789999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...|+++.+.++.
T Consensus 217 ~~~L~~~~~~~i~G~~i~vdgg~ 239 (252)
T PRK07856 217 CLFLASDLASYVSGANLEVHGGG 239 (252)
T ss_pred HHHHcCcccCCccCCEEEECCCc
Confidence 999997643 3578888887764
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.9e-19 Score=170.75 Aligned_cols=211 Identities=19% Similarity=0.169 Sum_probs=148.4
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
|||||++|+||+++++.|+++|++|++++|+. +....+.+.++.. + .++.++.+|++|.+++++++
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~~~~~ 67 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAY---------G----VKALGVVCDVSDREDVKAVV 67 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhc---------C----CceEEEEecCCCHHHHHHHH
Confidence 58999999999999999999999999999976 3333333333221 1 46889999999999888776
Q ss_pred c-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCchhh
Q 013273 162 G-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 162 ~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
. .+|+|||++|.... +..+++..+++|+.++.++++++.+ .+.++||++||.+... +.
T Consensus 68 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~-g~---- 142 (239)
T TIGR01830 68 EEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMIKQRSGRIINISSVVGLM-GN---- 142 (239)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCeEEEEECCccccC-CC----
Confidence 3 57999999996432 1223455678899999999998864 4567999999975432 21
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHh
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
.....|+.+|...+.+++ ..|++++++|||++.++...................+.+.+++|+|++++.++.
T Consensus 143 -~~~~~y~~~k~a~~~~~~~l~~~~~~~g~~~~~i~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~ 221 (239)
T TIGR01830 143 -AGQANYAASKAGVIGFTKSLAKELASRNITVNAVAPGFIDTDMTDKLSEKVKKKILSQIPLGRFGTPEEVANAVAFLAS 221 (239)
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCCCChhhhhcChHHHHHHHhcCCcCCCcCHHHHHHHHHHHhC
Confidence 234579999998876654 268999999999997763211100000000111123457899999999999986
Q ss_pred CCC-CCCCcEEEEecC
Q 013273 298 NRS-LSYCKVVEVIAE 312 (446)
Q Consensus 298 ~~~-~~~~~v~ni~~~ 312 (446)
+.. ...+++||+.++
T Consensus 222 ~~~~~~~g~~~~~~~g 237 (239)
T TIGR01830 222 DEASYITGQVIHVDGG 237 (239)
T ss_pred cccCCcCCCEEEeCCC
Confidence 542 246789998654
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.83 E-value=2e-19 Score=172.41 Aligned_cols=208 Identities=12% Similarity=0.061 Sum_probs=151.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+. ... ...++.++++|+.|.+++
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~--~~~--------------------~~~~~~~~~~D~~~~~~~ 63 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF--LTQ--------------------EDYPFATFVLDVSDAAAV 63 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch--hhh--------------------cCCceEEEEecCCCHHHH
Confidence 4568999999999999999999999999999999986 110 015689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ .+|+||||+|.... +..++...+++|+.++.++++++. +.+.++||++||......
T Consensus 64 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~~ss~~~~~~-- 141 (252)
T PRK08220 64 AQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQRSGAIVTVGSNAAHVP-- 141 (252)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECCchhccC--
Confidence 88764 48999999996432 122345567899999999998874 345569999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----cceee------cccCcccCCcc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----HNITL------SQEDTLFGGQV 283 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----~~~~~------~~~~~~~~~~v 283 (446)
......|+.+|...|.+++ ..|+++++++||+++++....... ..... .......+.++
T Consensus 142 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (252)
T PRK08220 142 ----RIGMAAYGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQRTLWVDEDGEQQVIAGFPEQFKLGIPLGKIA 217 (252)
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhhhhhccchhhhhhhhhhHHHHHhhcCCCcccC
Confidence 1335679999999988764 278999999999999984311000 00000 00112234679
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+|+++++++.+.. ...++++.+.++.
T Consensus 218 ~~~dva~~~~~l~~~~~~~~~g~~i~~~gg~ 248 (252)
T PRK08220 218 RPQEIANAVLFLASDLASHITLQDIVVDGGA 248 (252)
T ss_pred CHHHHHHHHHHHhcchhcCccCcEEEECCCe
Confidence 99999999999997642 3456777666653
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.2e-19 Score=171.69 Aligned_cols=213 Identities=14% Similarity=0.148 Sum_probs=148.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|+++.|+.+.... .++. .++.++.+|++|.+++
T Consensus 5 l~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~---~l~~---------------~~~~~~~~Dl~~~~~~ 66 (255)
T PRK06463 5 FKGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAK---ELRE---------------KGVFTIKCDVGNRDQV 66 (255)
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHH---HHHh---------------CCCeEEEecCCCHHHH
Confidence 456899999999999999999999999999988776542211 1111 2478899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.++..+++++ ++.+.++||++||..+....
T Consensus 67 ~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~g~iv~isS~~~~~~~- 145 (255)
T PRK06463 67 KKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLKLSKNGAIVNIASNAGIGTA- 145 (255)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHhCCCC-
Confidence 8776 368999999986421 22234566889999976665554 44556799999997653211
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc----e-eecccCcccCCccCHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN----I-TLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~----~-~~~~~~~~~~~~v~~~Dv 288 (446)
......|+.+|.+.+.+++ ..|+++++|+||++..+......... . .........+.+..++|+
T Consensus 146 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (255)
T PRK06463 146 ----AEGTTFYAITKAGIIILTRRLAFELGKYGIRVNAVAPGWVETDMTLSGKSQEEAEKLRELFRNKTVLKTTGKPEDI 221 (255)
T ss_pred ----CCCccHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCCCchhhcccCccchHHHHHHHHhCCCcCCCcCHHHH
Confidence 1234569999999987765 26899999999999766321100000 0 000112233456789999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+++++++.+.. ...|+++.+.++.
T Consensus 222 a~~~~~l~s~~~~~~~G~~~~~dgg~ 247 (255)
T PRK06463 222 ANIVLFLASDDARYITGQVIVADGGR 247 (255)
T ss_pred HHHHHHHcChhhcCCCCCEEEECCCe
Confidence 999999997643 2467888776654
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=3.1e-19 Score=176.14 Aligned_cols=203 Identities=14% Similarity=0.059 Sum_probs=147.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ...+..+.+|++|.+++
T Consensus 7 l~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~--------------~~~~~~~~~Dv~d~~~v 72 (296)
T PRK05872 7 LAGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGG--------------DDRVLTVVADVTDLAAM 72 (296)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcC--------------CCcEEEEEecCCCHHHH
Confidence 4578999999999999999999999999999999998877665543310 14567778999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +.+|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.+.....
T Consensus 73 ~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~-- 150 (296)
T PRK05872 73 QAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALIERRGYVLQVSSLAAFAAA-- 150 (296)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHhhcCCC--
Confidence 7765 468999999996432 22234556889999999999888532 33689999997653321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ce---eecccCcccCCccCHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NI---TLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~---~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+ ..|+++++++||++.++........ .. .........+..++++|+|+
T Consensus 151 ----~~~~~Y~asKaal~~~~~~l~~e~~~~gi~v~~v~Pg~v~T~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~va~ 226 (296)
T PRK05872 151 ----PGMAAYCASKAGVEAFANALRLEVAHHGVTVGSAYLSWIDTDLVRDADADLPAFRELRARLPWPLRRTTSVEKCAA 226 (296)
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHHHHHCcEEEEEecCcccchhhhhccccchhHHHHHhhCCCcccCCCCHHHHHH
Confidence 234579999999988765 3789999999999987632111000 00 00001112345689999999
Q ss_pred HHHHHHhCCC
Q 013273 291 LLACMAKNRS 300 (446)
Q Consensus 291 ai~~ll~~~~ 300 (446)
+++.++.+..
T Consensus 227 ~i~~~~~~~~ 236 (296)
T PRK05872 227 AFVDGIERRA 236 (296)
T ss_pred HHHHHHhcCC
Confidence 9999998764
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-19 Score=171.62 Aligned_cols=213 Identities=16% Similarity=0.073 Sum_probs=151.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+ ..++.++++|++|.+++
T Consensus 4 ~~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~ 67 (263)
T PRK06200 4 LHGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRF----------------GDHVLVVEGDVTSYADN 67 (263)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCcceEEEccCCCHHHH
Confidence 45689999999999999999999999999999999987766543321 14688899999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCC----CCCcccchHHHHHHHHHHHHhC---CCCEEEEEcccccc
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFD----ITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN 216 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~----~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~ 216 (446)
++++ +++|+||||||.... ...+ ++..+++|+.++..+++++... ..+++|++||....
T Consensus 68 ~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 147 (263)
T PRK06200 68 QRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKASGGSMIFTLSNSSF 147 (263)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence 7765 468999999996421 1111 3456789999999998888532 23589999997663
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccc---c------cc-e-eecccCccc
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE---T------HN-I-TLSQEDTLF 279 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~---~------~~-~-~~~~~~~~~ 279 (446)
... .....|+.+|...+.+++. .+++++.|.||++.++...... . .. . .........
T Consensus 148 ~~~------~~~~~Y~~sK~a~~~~~~~la~el~~~Irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 221 (263)
T PRK06200 148 YPG------GGGPLYTASKHAVVGLVRQLAYELAPKIRVNGVAPGGTVTDLRGPASLGQGETSISDSPGLADMIAAITPL 221 (263)
T ss_pred CCC------CCCchhHHHHHHHHHHHHHHHHHHhcCcEEEEEeCCccccCCcCccccCCCCcccccccchhHHhhcCCCC
Confidence 322 2234699999999988762 3599999999999876321100 0 00 0 000111223
Q ss_pred CCccCHHHHHHHHHHHHhCC-C-CCCCcEEEEecC
Q 013273 280 GGQVSNLQVAELLACMAKNR-S-LSYCKVVEVIAE 312 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~-~-~~~~~v~ni~~~ 312 (446)
+....++|+|+++++++.+. . ...|+++.+.++
T Consensus 222 ~r~~~~~eva~~~~fl~s~~~~~~itG~~i~vdgG 256 (263)
T PRK06200 222 QFAPQPEDHTGPYVLLASRRNSRALTGVVINADGG 256 (263)
T ss_pred CCCCCHHHHhhhhhheecccccCcccceEEEEcCc
Confidence 45688999999999999765 3 346777777655
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.8e-19 Score=171.67 Aligned_cols=213 Identities=15% Similarity=0.126 Sum_probs=148.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|++|||||+|+||+++++.|+++|++|++++|++++...+.++++.. .++.++.+|++|.++++++
T Consensus 1 m~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------------~~~~~~~~Dv~d~~~~~~~ 66 (259)
T PRK08340 1 MNVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEY--------------GEVYAVKADLSDKDDLKNL 66 (259)
T ss_pred CeEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhc--------------CCceEEEcCCCCHHHHHHH
Confidence 57999999999999999999999999999999988776665554321 4688999999999888877
Q ss_pred h-------cCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHH----H-hCCCCEEEEEccccccCCCC
Q 013273 161 L-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAA----T-IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa----~-~~~v~r~V~vSS~~~~~~~~ 220 (446)
+ +++|+||||||.... ...++...+.+|+.+...+.+.+ . +.+.++||++||..+...
T Consensus 67 ~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~~~~~-- 144 (259)
T PRK08340 67 VKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVSVKEP-- 144 (259)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcccCCC--
Confidence 6 468999999996321 11122333567777766554443 2 234569999999866332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----c----ccce-e--ecccCcccCC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----E----THNI-T--LSQEDTLFGG 281 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~----~~~~-~--~~~~~~~~~~ 281 (446)
......|+.+|...+.+.+ ..|++++.|.||++-++..... . .... . ........+.
T Consensus 145 ----~~~~~~y~~sKaa~~~~~~~la~e~~~~gI~v~~v~pG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 220 (259)
T PRK08340 145 ----MPPLVLADVTRAGLVQLAKGVSRTYGGKGIRAYTVLLGSFDTPGARENLARIAEERGVSFEETWEREVLERTPLKR 220 (259)
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhCCCCEEEEEeccCcccCccHHHHHHhhhhccCCchHHHHHHHHhccCCccC
Confidence 1234579999999988776 2689999999999987742110 0 0000 0 0001112345
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+..++|||+++++++.+.. ...|+++.+.++.
T Consensus 221 ~~~p~dva~~~~fL~s~~~~~itG~~i~vdgg~ 253 (259)
T PRK08340 221 TGRWEELGSLIAFLLSENAEYMLGSTIVFDGAM 253 (259)
T ss_pred CCCHHHHHHHHHHHcCcccccccCceEeecCCc
Confidence 6889999999999998653 3467777666653
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.2e-19 Score=171.17 Aligned_cols=196 Identities=13% Similarity=0.143 Sum_probs=139.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+++|||||+|+||+++++.|+++|++|++++|+.++...+.+ .+++++.+|+.|.+++++
T Consensus 1 mk~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~Dl~~~~~~~~ 61 (274)
T PRK05693 1 MPVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALAA-------------------AGFTAVQLDVNDGAALAR 61 (274)
T ss_pred CCEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeEEEeeCCCHHHHHH
Confidence 3689999999999999999999999999999998766544321 347789999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCCchh
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++ +++|+||||||.... +..++...+++|+.++.++++++.. .+.+++|++||.......
T Consensus 62 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~---- 137 (274)
T PRK05693 62 LAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLRRSRGLVVNIGSVSGVLVT---- 137 (274)
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCEEEEECCccccCCC----
Confidence 66 468999999996422 1223445678999999999988743 244689999996653221
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCc--------------ccCC
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDT--------------LFGG 281 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~--------------~~~~ 281 (446)
.....|+.+|...+.+.+ ..|+++++|+||.+.++........ ......... ....
T Consensus 138 --~~~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (274)
T PRK05693 138 --PFAGAYCASKAAVHALSDALRLELAPFGVQVMEVQPGAIASQFASNASREAEQLLAEQSPWWPLREHIQARARASQDN 215 (274)
T ss_pred --CCccHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCccccccccccccchhhcCCCCCccHHHHHHHHHHHHhccCC
Confidence 224569999999887654 3699999999999987632111000 000000000 0112
Q ss_pred ccCHHHHHHHHHHHHhCCC
Q 013273 282 QVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~ 300 (446)
...++|+|+.++.++..+.
T Consensus 216 ~~~~~~~a~~i~~~~~~~~ 234 (274)
T PRK05693 216 PTPAAEFARQLLAAVQQSP 234 (274)
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 4689999999999998654
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=1e-18 Score=169.07 Aligned_cols=218 Identities=15% Similarity=0.116 Sum_probs=152.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.++...+.+++... ....++.++.+|++|.+++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~v 74 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREK-----------FPGARLLAARCDVLDEADV 74 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhh-----------CCCceEEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777665554321 0113688899999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... ...++...+++|+.+...+++++. +.+.++||++||.......
T Consensus 75 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 153 (265)
T PRK07062 75 AAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRASAAASIVCVNSLLALQPE- 153 (265)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhccCCcEEEEeccccccCCC-
Confidence 7665 468999999996422 122345557788888877776663 3455799999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc--cc--ccceee--------cccCcccCC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY--KE--THNITL--------SQEDTLFGG 281 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~--~~--~~~~~~--------~~~~~~~~~ 281 (446)
.....|+.+|...+.+.+ ..|++++.|+||++.++.... .. ...... .......+.
T Consensus 154 -----~~~~~y~asKaal~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 228 (265)
T PRK07062 154 -----PHMVATSAARAGLLNLVKSLATELAPKGVRVNSILLGLVESGQWRRRYEARADPGQSWEAWTAALARKKGIPLGR 228 (265)
T ss_pred -----CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccchhhhHHHHhhccCCChHHHHHHHhhcCCCCcCC
Confidence 223469999998876654 378999999999998763211 00 000000 001112345
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+..++|+|+++++++.+.. ...|+++.+.++
T Consensus 229 ~~~p~~va~~~~~L~s~~~~~~tG~~i~vdgg 260 (265)
T PRK07062 229 LGRPDEAARALFFLASPLSSYTTGSHIDVSGG 260 (265)
T ss_pred CCCHHHHHHHHHHHhCchhcccccceEEEcCc
Confidence 6789999999999987532 346777877655
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-19 Score=169.88 Aligned_cols=215 Identities=13% Similarity=0.121 Sum_probs=152.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++++||||+|+||+++++.|+++|++|++++|+..+...+.+.+... ..++.++.+|++|.+++++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~ 67 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQF-------------PGQVLTVQMDVRNPEDVQK 67 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEecCCCHHHHHH
Confidence 368999999999999999999999999999999987766665544321 1568899999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCc
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~ 221 (446)
++ +++|+||||+|.... +..++...+++|+.++.++++++.+ .+ .++||++||.......
T Consensus 68 ~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~~~~-- 145 (252)
T PRK07677 68 MVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVATYAWDAG-- 145 (252)
T ss_pred HHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcChhhccCC--
Confidence 65 468999999985321 2223455689999999999999843 22 3689999997653221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH--------hCCCCEEEEecCCccCCCcccc--ccccee-ecccCcccCCccCHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYK--ETHNIT-LSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tivRPg~v~gp~~~~~--~~~~~~-~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+ .+|++++.|+||++.+...... ...... ........+.+...+|+|+
T Consensus 146 ----~~~~~Y~~sKaa~~~~~~~la~e~~~~~gi~v~~v~PG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~ 221 (252)
T PRK07677 146 ----PGVIHSAAAKAGVLAMTRTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWESEEAAKRTIQSVPLGRLGTPEEIAG 221 (252)
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhCcccCeEEEEEeecccccccccccccCCHHHHHHHhccCCCCCCCCHHHHHH
Confidence 123469999999887765 2589999999999985421100 000000 0001122445789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++..++.+.. ...|+++.+.++.
T Consensus 222 ~~~~l~~~~~~~~~g~~~~~~gg~ 245 (252)
T PRK07677 222 LAYFLLSDEAAYINGTCITMDGGQ 245 (252)
T ss_pred HHHHHcCccccccCCCEEEECCCe
Confidence 9999887642 3467777776653
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=6e-19 Score=172.28 Aligned_cols=215 Identities=13% Similarity=0.087 Sum_probs=147.8
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++++||||+ ++||+++++.|+++|++|++.+|+....+.+ +++... .+ .. .++.+|++|.+
T Consensus 3 l~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~-~~~~~~--------~~----~~-~~~~~Dv~d~~ 68 (274)
T PRK08415 3 MKGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRV-EPIAQE--------LG----SD-YVYELDVSKPE 68 (274)
T ss_pred cCCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHH-HHHHHh--------cC----Cc-eEEEecCCCHH
Confidence 356899999997 7999999999999999999999985322222 222110 01 22 57899999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|++|||||.... +..+++..+++|+.++..+++++... .-++||++||.+..
T Consensus 69 ~v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~ 148 (274)
T PRK08415 69 HFKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGGV 148 (274)
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCCc
Confidence 887765 568999999996421 12335567899999999998888643 22589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~D 287 (446)
... ..+..|+.+|+..+.+.+ .+|++++.|.||++.++....... ... .........+.+..++|
T Consensus 149 ~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~r~~~ped 222 (274)
T PRK08415 149 KYV------PHYNVMGVAKAALESSVRYLAVDLGKKGIRVNAISAGPIKTLAASGIGDFRMILKWNEINAPLKKNVSIEE 222 (274)
T ss_pred cCC------CcchhhhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHHHhccchhhHHhhhhhhhCchhccCCHHH
Confidence 221 224569999999887765 378999999999998763110000 000 00001112345688999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
||+++++++.+.. ...++++.+.++
T Consensus 223 va~~v~fL~s~~~~~itG~~i~vdGG 248 (274)
T PRK08415 223 VGNSGMYLLSDLSSGVTGEIHYVDAG 248 (274)
T ss_pred HHHHHHHHhhhhhhcccccEEEEcCc
Confidence 9999999998643 346777766665
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.5e-19 Score=166.73 Aligned_cols=214 Identities=16% Similarity=0.142 Sum_probs=147.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|||||+|+||+++++.|+++|++|+++.| +......+..++... ..++.++.+|+.|.+++.+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~D~~~~~~~~~ 67 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGAL-------------GFDFRVVEGDVSSFESCKA 67 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhh-------------CCceEEEEecCCCHHHHHH
Confidence 47999999999999999999999999999998 444444433322211 1468999999999888776
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ +.+|+||||+|.... +..++...+++|+.++..+++.+ ++.+.++||++||.......
T Consensus 68 ~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~iss~~~~~~~--- 144 (242)
T TIGR01829 68 AVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMRERGWGRIINISSVNGQKGQ--- 144 (242)
T ss_pred HHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC---
Confidence 65 458999999986432 12233445678999887765554 55677899999997543221
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.....|..+|...+.+++ ..|+++++++||++.++.....................+...+|+++++.++
T Consensus 145 ---~~~~~y~~sk~a~~~~~~~la~~~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l 221 (242)
T TIGR01829 145 ---FGQTNYSAAKAGMIGFTKALAQEGATKGVTVNTISPGYIATDMVMAMREDVLNSIVAQIPVGRLGRPEEIAAAVAFL 221 (242)
T ss_pred ---CCcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCCCcCccccccchHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 234569999997776654 2689999999999998743211000000000112233457889999999988
Q ss_pred HhCCC-CCCCcEEEEecCC
Q 013273 296 AKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~ 313 (446)
+.++. ...|+++++.++.
T Consensus 222 ~~~~~~~~~G~~~~~~gg~ 240 (242)
T TIGR01829 222 ASEEAGYITGATLSINGGL 240 (242)
T ss_pred cCchhcCccCCEEEecCCc
Confidence 87643 2468888887763
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.4e-19 Score=170.83 Aligned_cols=217 Identities=12% Similarity=0.090 Sum_probs=147.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|++.|++|+++.| +.+....+.+.++.. .+ .++.++.+|++|.++
T Consensus 6 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~--------~~----~~~~~~~~D~~~~~~ 73 (260)
T PRK08416 6 MKGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQK--------YG----IKAKAYPLNILEPET 73 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHh--------cC----CceEEEEcCCCCHHH
Confidence 45689999999999999999999999999988875 444555444443321 01 478999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccc
Q 013273 157 IEPAL-------GNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~ 213 (446)
+++++ +++|+||||||.... ...++...+++|+.+...+.+.+. +.+.++||++||.
T Consensus 74 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~ 153 (260)
T PRK08416 74 YKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKVGGGSIISLSST 153 (260)
T ss_pred HHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhccCCEEEEEEecc
Confidence 87766 468999999985311 112233456778877776665553 3445699999997
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccC
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVS 284 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~ 284 (446)
+...+. ..+..|+.+|+..+.+.+ ..|++++.|+||++.++....... .... ........+.+..
T Consensus 154 ~~~~~~------~~~~~Y~asK~a~~~~~~~la~el~~~gi~v~~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~r~~~ 227 (260)
T PRK08416 154 GNLVYI------ENYAGHGTSKAAVETMVKYAATELGEKNIRVNAVSGGPIDTDALKAFTNYEEVKAKTEELSPLNRMGQ 227 (260)
T ss_pred ccccCC------CCcccchhhHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccChhhhhccCCHHHHHHHHhcCCCCCCCC
Confidence 653221 233479999999998775 268999999999997763111000 0000 0001122345789
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++|+|+++++++.+.. ...++++.+.++
T Consensus 228 p~~va~~~~~l~~~~~~~~~G~~i~vdgg 256 (260)
T PRK08416 228 PEDLAGACLFLCSEKASWLTGQTIVVDGG 256 (260)
T ss_pred HHHHHHHHHHHcChhhhcccCcEEEEcCC
Confidence 9999999999997543 235677777554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.3e-19 Score=169.56 Aligned_cols=215 Identities=12% Similarity=0.116 Sum_probs=148.4
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++++||||+ ++||++++++|+++|++|++++|+....+.+.+..+.. +.+.++.+|++|.+
T Consensus 8 ~~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~--------------~~~~~~~~D~~~~~ 73 (258)
T PRK07533 8 LAGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEEL--------------DAPIFLPLDVREPG 73 (258)
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhh--------------ccceEEecCcCCHH
Confidence 567899999998 59999999999999999999999864332222211111 23568899999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|++|||||.... +..+++..+++|+.+..++++++... .-+++|++||.+..
T Consensus 74 ~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~~ 153 (258)
T PRK07533 74 QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGAE 153 (258)
T ss_pred HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence 887765 568999999996421 22345567899999999999887543 22589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~D 287 (446)
.. ...+..|+.+|+..+.+.+ ..|++++.|.||++.++....... ... .........+.+..++|
T Consensus 154 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 227 (258)
T PRK07533 154 KV------VENYNLMGPVKAALESSVRYLAAELGPKGIRVHAISPGPLKTRAASGIDDFDALLEDAAERAPLRRLVDIDD 227 (258)
T ss_pred cC------CccchhhHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCcCChhhhccCCcHHHHHHHHhcCCcCCCCCHHH
Confidence 22 1234579999999887765 378999999999998763110000 000 00001122345688999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+++++++.+.. ...|+++.+-++
T Consensus 228 va~~~~~L~s~~~~~itG~~i~vdgg 253 (258)
T PRK07533 228 VGAVAAFLASDAARRLTGNTLYIDGG 253 (258)
T ss_pred HHHHHHHHhChhhccccCcEEeeCCc
Confidence 9999999997642 345677766544
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.8e-19 Score=178.37 Aligned_cols=170 Identities=14% Similarity=0.176 Sum_probs=126.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+||||+||||+++++.|+++|++|++++|+.++...+.+++.. ...++.++.+|+.|.+++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v 70 (322)
T PRK07453 4 DAKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGI-------------PPDSYTIIHIDLGDLDSV 70 (322)
T ss_pred CCCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc-------------cCCceEEEEecCCCHHHH
Confidence 3567999999999999999999999999999999998877665554321 114689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CC--CCEEEEEccccccC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v~r~V~vSS~~~~~ 217 (446)
+++++ ++|+||||||.... +..+++..+++|+.|+.++++++.. .+ .+|||++||.....
T Consensus 71 ~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 71 RRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 87763 48999999995321 2233556689999999999888754 22 35999999965421
Q ss_pred ---CCC-----c---------------------hhhhchhhHHHHHHHHHHHHHH----h----CCCCEEEEecCCccCC
Q 013273 218 ---FGF-----P---------------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERP 260 (446)
Q Consensus 218 ---~~~-----~---------------------~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tivRPg~v~gp 260 (446)
.+. . .....+...|+.+|...+.+.+ + .|++++++|||+|++.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 151 KELGGKIPIPAPADLGDLSGFEAGFKAPISMADGKKFKPGKAYKDSKLCNMLTMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred cccCCccCCCCccchhhhhcchhcccccccccCccCCCccchhhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 000 0 0113456789999998765443 2 4899999999999853
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.2e-19 Score=169.19 Aligned_cols=215 Identities=15% Similarity=0.155 Sum_probs=145.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++||||||+|+||+++++.|+++|++|+++. |+.++...+...++.. ..++.++.+|+.|.++++
T Consensus 2 ~k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~~~~ 68 (248)
T PRK06947 2 RKVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAA-------------GGRACVVAGDVANEADVI 68 (248)
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc-------------CCcEEEEEeccCCHHHHH
Confidence 46899999999999999999999999998765 5555555444433221 147899999999998887
Q ss_pred HHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC----C---CCEEEEEccccccC
Q 013273 159 PAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNK 217 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~----~---v~r~V~vSS~~~~~ 217 (446)
+++ +.+|+||||||.... ...++...+++|+.++.++++++.+. + -++||++||.+...
T Consensus 69 ~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~~~~ 148 (248)
T PRK06947 69 AMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIASRL 148 (248)
T ss_pred HHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhcC
Confidence 665 368999999995421 11223445789999998887655432 1 24799999975532
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
... ..+..|+.+|...+.+++ ..|+++++||||++.++.......... .........+....++|+|
T Consensus 149 ~~~-----~~~~~Y~~sK~~~~~~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va 223 (248)
T PRK06947 149 GSP-----NEYVDYAGSKGAVDTLTLGLAKELGPHGVRVNAVRPGLIETEIHASGGQPGRAARLGAQTPLGRAGEADEVA 223 (248)
T ss_pred CCC-----CCCcccHhhHHHHHHHHHHHHHHhhhhCcEEEEEeccCcccccccccCCHHHHHHHhhcCCCCCCcCHHHHH
Confidence 211 112469999999887654 258999999999999874221100000 0000111123357899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+.+++++.++. ...|+++.+.++
T Consensus 224 ~~~~~l~~~~~~~~~G~~~~~~gg 247 (248)
T PRK06947 224 ETIVWLLSDAASYVTGALLDVGGG 247 (248)
T ss_pred HHHHHHcCccccCcCCceEeeCCC
Confidence 99999998754 246777766543
|
|
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.1e-19 Score=169.06 Aligned_cols=203 Identities=18% Similarity=0.202 Sum_probs=145.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++|+||||+++||.+++.+|+++|.+++++.|...+.+.+.+++++. +.. .++.++++|++|.++
T Consensus 9 ~~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~---------~~~--~~v~~~~~Dvs~~~~ 77 (282)
T KOG1205|consen 9 RLAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKL---------GSL--EKVLVLQLDVSDEES 77 (282)
T ss_pred HhCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHh---------CCc--CccEEEeCccCCHHH
Confidence 467899999999999999999999999999999999999988887777664 211 269999999999999
Q ss_pred HHHHh-------cCCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|++|||||...... .+....+++|+.|+..+.+++. +.+-+|||.+||+.+....
T Consensus 78 ~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~ 157 (282)
T KOG1205|consen 78 VKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPL 157 (282)
T ss_pred HHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCC
Confidence 98664 78999999999754322 2234468999999999999884 3455799999998774432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH---h----CCCCEE-EEecCCccCCCcccccccceeecccCcccCCccCHHHHHH-
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI---A----SGLPYT-IVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE- 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~---~----~gl~~t-ivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~- 290 (446)
.....|.+||++.+.+.. . .+..+. +|.||+|-+.... ............+.....+|++.
T Consensus 158 ------P~~~~Y~ASK~Al~~f~etLR~El~~~~~~i~i~V~PG~V~Te~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (282)
T KOG1205|consen 158 ------PFRSIYSASKHALEGFFETLRQELIPLGTIIIILVSPGPIETEFTG----KELLGEEGKSQQGPFLRTEDVADP 227 (282)
T ss_pred ------CcccccchHHHHHHHHHHHHHHHhhccCceEEEEEecCceeecccc----hhhccccccccccchhhhhhhhhH
Confidence 222379999999997753 2 332222 6999999765210 11111111122334455667755
Q ss_pred -HHHHHHhCCC
Q 013273 291 -LLACMAKNRS 300 (446)
Q Consensus 291 -ai~~ll~~~~ 300 (446)
.+..++..+.
T Consensus 228 ~~~~~~i~~~~ 238 (282)
T KOG1205|consen 228 EAVAYAISTPP 238 (282)
T ss_pred HHHHHHHhcCc
Confidence 7777776654
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.6e-19 Score=166.46 Aligned_cols=204 Identities=17% Similarity=0.148 Sum_probs=144.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+||||+|+||+++++.|+++|++|++++|+.... ...+++.+|+.|.++++
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~~------------------------~~~~~~~~D~~~~~~~~ 57 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAIDD------------------------FPGELFACDLADIEQTA 57 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCcccc------------------------cCceEEEeeCCCHHHHH
Confidence 357899999999999999999999999999999987530 11257889999999888
Q ss_pred HHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCch
Q 013273 159 PALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 159 ~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++. ++|+||||+|.... +..++...+++|+.++.++++++ ++.+.++||++||.+.. +.
T Consensus 58 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~--~~-- 133 (234)
T PRK07577 58 ATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLREQGRIVNICSRAIF--GA-- 133 (234)
T ss_pred HHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcccccc--CC--
Confidence 7764 68999999996432 12234455778999988877666 44577899999998642 21
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--cceee-cccCcccCCccCHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITL-SQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~~~~~-~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...|.+++ ..|+++++||||++.++....... ..... .......+....++|+|+++
T Consensus 134 ---~~~~~Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 210 (234)
T PRK07577 134 ---LDRTSYSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETELFRQTRPVGSEEEKRVLASIPMRRLGTPEEVAAAI 210 (234)
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcccccccccchhHHHHHhhcCCCCCCcCHHHHHHHH
Confidence 224579999999887765 369999999999998774211100 00000 00011122345889999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.++.++. ...++++.+.++.
T Consensus 211 ~~l~~~~~~~~~g~~~~~~g~~ 232 (234)
T PRK07577 211 AFLLSDDAGFITGQVLGVDGGG 232 (234)
T ss_pred HHHhCcccCCccceEEEecCCc
Confidence 99997653 2357788776553
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-19 Score=170.96 Aligned_cols=216 Identities=11% Similarity=0.109 Sum_probs=149.4
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.++++|||||+ ++||+++++.|+++|++|++..|+....+.+. ++.+. .+.+.++.+|++|.+
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~-~l~~~-------------~~~~~~~~~Dl~~~~ 73 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVE-PLAAE-------------LGAFVAGHCDVTDEA 73 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHH-HHHHh-------------cCCceEEecCCCCHH
Confidence 456899999997 89999999999999999999888642222221 11110 023567899999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|++|||||.... +..++...+++|+.++.++++++... +.+++|++||.+..
T Consensus 74 ~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~iss~~~~ 153 (272)
T PRK08159 74 SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMTDGGSILTLTYYGAE 153 (272)
T ss_pred HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcCCCceEEEEeccccc
Confidence 888775 468999999996431 22345667889999999999988653 23689999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce--eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI--TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~--~~~~~~~~~~~~v~~~D 287 (446)
.. ...+..|+.+|+..+.+.+ ..|+++++|.||++.++.......... .........+.+..++|
T Consensus 154 ~~------~p~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pee 227 (272)
T PRK08159 154 KV------MPHYNVMGVAKAALEASVKYLAVDLGPKNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTIEE 227 (272)
T ss_pred cC------CCcchhhhhHHHHHHHHHHHHHHHhcccCeEEEEeecCCcCCHHHhcCCcchHHHHHHHhCCcccccCCHHH
Confidence 21 1234569999999987765 378999999999998752111000000 00001122345678999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...++++.+.++.
T Consensus 228 vA~~~~~L~s~~~~~itG~~i~vdgG~ 254 (272)
T PRK08159 228 VGDSALYLLSDLSRGVTGEVHHVDSGY 254 (272)
T ss_pred HHHHHHHHhCccccCccceEEEECCCc
Confidence 9999999998643 3467777776663
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=168.15 Aligned_cols=217 Identities=16% Similarity=0.123 Sum_probs=152.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+.+....+.+.+... + .++.++.+|++|.+++
T Consensus 7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~i 73 (264)
T PRK07576 7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQA---------G----PEGLGVSADVRDYAAV 73 (264)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------C----CceEEEECCCCCHHHH
Confidence 45679999999999999999999999999999999987766554444321 1 4578899999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++... ..++||++||......
T Consensus 74 ~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~~~g~iv~iss~~~~~~--- 150 (264)
T PRK07576 74 EAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRRPGASIIQISAPQAFVP--- 150 (264)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCEEEEECChhhccC---
Confidence 8776 357999999985321 12223445779999999999888642 2259999999755321
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCC-cc-ccccccee-ecccCcccCCccCHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPT-DA-YKETHNIT-LSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~-~~-~~~~~~~~-~~~~~~~~~~~v~~~DvA~a 291 (446)
......|..+|...|.+++. .|+++++|+||++.+.. .. ........ ........+....++|+|++
T Consensus 151 ---~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~pg~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 227 (264)
T PRK07576 151 ---MPMQAHVCAAKAGVDMLTRTLALEWGPEGIRVNSIVPGPIAGTEGMARLAPSPELQAAVAQSVPLKRNGTKQDIANA 227 (264)
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccccCcHHHhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 13345799999999988762 68999999999987532 11 00000000 00011123456889999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...+.++.+.++.
T Consensus 228 ~~~l~~~~~~~~~G~~~~~~gg~ 250 (264)
T PRK07576 228 ALFLASDMASYITGVVLPVDGGW 250 (264)
T ss_pred HHHHcChhhcCccCCEEEECCCc
Confidence 999997643 2356777776654
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2e-18 Score=171.03 Aligned_cols=220 Identities=16% Similarity=0.059 Sum_probs=145.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|+||||+||||+++++.|+++|++|++++|+.++.....+.+... ....++.++.+|+.|.++
T Consensus 13 ~~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dl~d~~~ 81 (306)
T PRK06197 13 DQSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAA-----------TPGADVTLQELDLTSLAS 81 (306)
T ss_pred cCCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------CCCCceEEEECCCCCHHH
Confidence 456789999999999999999999999999999999987766655544321 111468899999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC----ccCCCCCcccchHHHHH----HHHHHHHhCCCCEEEEEccccccCCCCc
Q 013273 157 IEPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQATK----NLVDAATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~----~l~~aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ +++|+||||||.... ...+++..+++|+.+.. .+++.+++.+.++||++||.+...++..
T Consensus 82 v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~~~~~iV~vSS~~~~~~~~~ 161 (306)
T PRK06197 82 VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPVPGSRVVTVSSGGHRIRAAI 161 (306)
T ss_pred HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhCCCCEEEEECCHHHhccCCC
Confidence 88765 368999999996422 23345667899999955 4555555566679999999764321110
Q ss_pred -------hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEE--ecCCccCCCccccccc-ceeecccCcccCCccC
Q 013273 222 -------AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIV--RPGGMERPTDAYKETH-NITLSQEDTLFGGQVS 284 (446)
Q Consensus 222 -------~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tiv--RPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~ 284 (446)
.....+...|+.+|+..+.+.+ ..|++++++ .||++.++........ ..........+ ...
T Consensus 162 ~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~l~~~~i~v~~v~~~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~ 239 (306)
T PRK06197 162 HFDDLQWERRYNRVAAYGQSKLANLLFTYELQRRLAAAGATTIAVAAHPGVSNTELARNLPRALRPVATVLAPLL--AQS 239 (306)
T ss_pred CccccCcccCCCcHHHHHHHHHHHHHHHHHHHHHhhcCCCCeEEEEeCCCcccCcccccCcHHHHHHHHHHHhhh--cCC
Confidence 0123456789999999887765 257776654 7999987632111000 00000000001 245
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
.++-+..++.++.++....+..|+.
T Consensus 240 ~~~g~~~~~~~~~~~~~~~g~~~~~ 264 (306)
T PRK06197 240 PEMGALPTLRAATDPAVRGGQYYGP 264 (306)
T ss_pred HHHHHHHHHHHhcCCCcCCCeEEcc
Confidence 5667777777776665344555544
|
|
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.2e-19 Score=168.45 Aligned_cols=207 Identities=15% Similarity=0.123 Sum_probs=146.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-hc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~~ 156 (446)
+++++++||||+|+||+++++.|+++|++|++++|+..... ..++.++.+|+.|. +.
T Consensus 3 l~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~----------------------~~~~~~~~~D~~~~~~~ 60 (235)
T PRK06550 3 FMTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPDL----------------------SGNFHFLQLDLSDDLEP 60 (235)
T ss_pred CCCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCccccc----------------------CCcEEEEECChHHHHHH
Confidence 34579999999999999999999999999999999754210 14688999999997 44
Q ss_pred HHHHhcCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCchhhh
Q 013273 157 IEPALGNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFPAAIL 225 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~~~~~~ 225 (446)
+.+.++++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||.......
T Consensus 61 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~------ 134 (235)
T PRK06550 61 LFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKSGIIINMCSIASFVAG------ 134 (235)
T ss_pred HHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccCC------
Confidence 45556789999999985321 1223455688999999999988853 345689999997653321
Q ss_pred chhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-ccccee-ecccCcccCCccCHHHHHHHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT-LSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~-~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++..... ...... ........+.+...+|+|+++++++
T Consensus 135 ~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~l~ 214 (235)
T PRK06550 135 GGGAAYTASKHALAGFTKQLALDYAKDGIQVFGIAPGAVKTPMTAADFEPGGLADWVARETPIKRWAEPEEVAELTLFLA 214 (235)
T ss_pred CCCcccHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCccCcccccccCchHHHHHHhccCCcCCCCCHHHHHHHHHHHc
Confidence 223469999999887665 2589999999999988743111 000000 0011122345688999999999999
Q ss_pred hCCC-CCCCcEEEEecC
Q 013273 297 KNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 297 ~~~~-~~~~~v~ni~~~ 312 (446)
.+.. ...++++.+.++
T Consensus 215 s~~~~~~~g~~~~~~gg 231 (235)
T PRK06550 215 SGKADYMQGTIVPIDGG 231 (235)
T ss_pred ChhhccCCCcEEEECCc
Confidence 7643 345677776654
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.7e-19 Score=168.84 Aligned_cols=217 Identities=15% Similarity=0.173 Sum_probs=154.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++|+||||+|+||+++++.|+++|++ |++++|+.++...+.+.+... + .++.++.+|++|.++
T Consensus 4 ~~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 70 (260)
T PRK06198 4 LDGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEAL---------G----AKAVFVQADLSDVED 70 (260)
T ss_pred CCCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhc---------C----CeEEEEEccCCCHHH
Confidence 56689999999999999999999999999 999999876665544444221 1 468889999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~ 218 (446)
+.+++ +++|+||||+|.... ...++...+++|+.+..++++++.+ .+ .++||++||......
T Consensus 71 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~ 150 (260)
T PRK06198 71 CRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGG 150 (260)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccC
Confidence 88776 368999999996432 1222344578999999999888753 22 358999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----ccceeec--ccCcccCCccC
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNITLS--QEDTLFGGQVS 284 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~~~~~~--~~~~~~~~~v~ 284 (446)
. .....|+.+|...|.+++ ..+++++.++||+++++...... .....+. .....++.+++
T Consensus 151 ~------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T PRK06198 151 Q------PFLAAYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEGEDRIQREFHGAPDDWLEKAAATQPFGRLLD 224 (260)
T ss_pred C------CCcchhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcchhhhhhhccCCChHHHHHHhccCCccCCcC
Confidence 1 234579999999998876 25799999999999988532100 0000000 01222445689
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+|+|+++++++.+.. ...+++|++.++.
T Consensus 225 ~~~~a~~~~~l~~~~~~~~~G~~~~~~~~~ 254 (260)
T PRK06198 225 PDEVARAVAFLLSDESGLMTGSVIDFDQSV 254 (260)
T ss_pred HHHHHHHHHHHcChhhCCccCceEeECCcc
Confidence 9999999999987553 2467888776654
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.1e-18 Score=165.97 Aligned_cols=207 Identities=12% Similarity=0.071 Sum_probs=144.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++|||||+|+||+++++.|+++|++|++++|+.+.... .++. .++.++.+|+.|.+++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~~~---------------~~~~~~~~D~~~~~~~~~ 63 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAID---GLRQ---------------AGAQCIQADFSTNAGIMA 63 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHH---------------cCCEEEEcCCCCHHHHHH
Confidence 4689999999999999999999999999999998754322 2221 236789999999988877
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC--CCEEEEEccccccCCCC
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v~r~V~vSS~~~~~~~~ 220 (446)
++ +++|+||||||.... ...+++..+++|+.++..+.+++.. .+ .+++|++||.......
T Consensus 64 ~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~- 142 (236)
T PRK06483 64 FIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDYVVEKGS- 142 (236)
T ss_pred HHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcchhhccCC-
Confidence 65 458999999996322 1233455678899999887777653 23 4689999997543211
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...|.+++. .++++++|+||++............... .....+....++|+|+++.+
T Consensus 143 -----~~~~~Y~asKaal~~l~~~~a~e~~~~irvn~v~Pg~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~va~~~~~ 215 (236)
T PRK06483 143 -----DKHIAYAASKAALDNMTLSFAAKLAPEVKVNSIAPALILFNEGDDAAYRQKAL--AKSLLKIEPGEEEIIDLVDY 215 (236)
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCceecCCCCCHHHHHHHh--ccCccccCCCHHHHHHHHHH
Confidence 2345799999999988762 3699999999998543211000000000 11123345689999999999
Q ss_pred HHhCCCCCCCcEEEEecCC
Q 013273 295 MAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~ 313 (446)
++.+. ...++++.+.++.
T Consensus 216 l~~~~-~~~G~~i~vdgg~ 233 (236)
T PRK06483 216 LLTSC-YVTGRSLPVDGGR 233 (236)
T ss_pred HhcCC-CcCCcEEEeCccc
Confidence 99744 3567888776653
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.81 E-value=8.6e-19 Score=169.52 Aligned_cols=213 Identities=16% Similarity=0.070 Sum_probs=150.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+++++.|+++|++|++++|+.++.+.+.+. ...++.++.+|+.|.+++
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~----------------~~~~~~~~~~D~~~~~~~ 66 (262)
T TIGR03325 3 LKGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAA----------------HGDAVVGVEGDVRSLDDH 66 (262)
T ss_pred cCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhh----------------cCCceEEEEeccCCHHHH
Confidence 3568999999999999999999999999999999988765554321 014688999999998877
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------cc----CCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEcccccc
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EV----FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN 216 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~----~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~ 216 (446)
.+++ +++|+||||||.... .. .+++..+++|+.++.++++++.+. ..+++|++||....
T Consensus 67 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~~sS~~~~ 146 (262)
T TIGR03325 67 KEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVASRGSVIFTISNAGF 146 (262)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhcCCCEEEEecccee
Confidence 7665 468999999985321 11 134567899999999999998642 22579999886553
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccc---cc----ceeec---ccCcccC
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE---TH----NITLS---QEDTLFG 280 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~---~~----~~~~~---~~~~~~~ 280 (446)
... .....|+.+|...+.+++. ..++++.|+||++.++...... .. ..... ......+
T Consensus 147 ~~~------~~~~~Y~~sKaa~~~l~~~la~e~~~~irvn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 220 (262)
T TIGR03325 147 YPN------GGGPLYTAAKHAVVGLVKELAFELAPYVRVNGVAPGGMSSDLRGPKSLGMADKSISTVPLGDMLKSVLPIG 220 (262)
T ss_pred cCC------CCCchhHHHHHHHHHHHHHHHHhhccCeEEEEEecCCCcCCCccccccccccccccccchhhhhhhcCCCC
Confidence 221 2234699999999988752 2389999999999876321100 00 00000 0112234
Q ss_pred CccCHHHHHHHHHHHHhCCC--CCCCcEEEEecC
Q 013273 281 GQVSNLQVAELLACMAKNRS--LSYCKVVEVIAE 312 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~--~~~~~v~ni~~~ 312 (446)
.+..++|+|+++++++.+.. ...++++.+.++
T Consensus 221 r~~~p~eva~~~~~l~s~~~~~~~tG~~i~vdgg 254 (262)
T TIGR03325 221 RMPDAEEYTGAYVFFATRGDTVPATGAVLNYDGG 254 (262)
T ss_pred CCCChHHhhhheeeeecCCCcccccceEEEecCC
Confidence 56889999999999987632 235777777655
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.2e-18 Score=166.66 Aligned_cols=214 Identities=13% Similarity=0.082 Sum_probs=146.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
+|+||||+|+||+++++.|+++|++|++++|+ .++..++.+.+... . ....+.++.+|+.|.++++++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~---------~--~~~~~~~~~~D~~~~~~~~~~ 69 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAA---------H--GEGVAFAAVQDVTDEAQWQAL 69 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhc---------C--CCceEEEEEeecCCHHHHHHH
Confidence 38999999999999999999999999999998 56555555444321 0 012356788999999988776
Q ss_pred h-------cCCCEEEEcccCCCCc------cCCCCCcccchHH----HHHHHHHHHHhCCCCEEEEEccccccCCCCchh
Q 013273 161 L-------GNASVVICCIGASEKE------VFDITGPYRIDFQ----ATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~----g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+ +++|+||||||..... ..++...+++|+. ++.++++++++.+.++||++||.......
T Consensus 70 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~ii~~ss~~~~~~~---- 145 (251)
T PRK07069 70 LAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRASQPASIVNISSVAAFKAE---- 145 (251)
T ss_pred HHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEecChhhccCC----
Confidence 5 4689999999864321 1233445678887 66777777777777899999997663321
Q ss_pred hhchhhHHHHHHHHHHHHHHh-------C--CCCEEEEecCCccCCCcccccc----c-ceeecccCcccCCccCHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAYKET----H-NITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~-------~--gl~~tivRPg~v~gp~~~~~~~----~-~~~~~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...+.+.+. . +++++.|+||++.++....... . ...........+.+.+++|+|
T Consensus 146 --~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 223 (251)
T PRK07069 146 --PDYTAYNASKAAVASLTKSIALDCARRGLDVRCNSIHPTFIRTGIVDPIFQRLGEEEATRKLARGVPLGRLGEPDDVA 223 (251)
T ss_pred --CCCchhHHHHHHHHHHHHHHHHHhcccCCcEEEEEEeecccCCcchhHHhhhccchhHHHHHhccCCCCCCcCHHHHH
Confidence 2344699999998877652 2 4889999999999885321000 0 000000112234467899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.++. ...++.+.+.++
T Consensus 224 ~~~~~l~~~~~~~~~g~~i~~~~g 247 (251)
T PRK07069 224 HAVLYLASDESRFVTGAELVIDGG 247 (251)
T ss_pred HHHHHHcCccccCccCCEEEECCC
Confidence 99999887643 235666666544
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=168.27 Aligned_cols=217 Identities=18% Similarity=0.150 Sum_probs=154.0
Q ss_pred CCCCEEEEECCCc-HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG-~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++++||||+| +||+++++.|+++|++|++++|+.++.+...+.++.. ....++.++.+|++|.++
T Consensus 15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~ 83 (262)
T PRK07831 15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAE-----------LGLGRVEAVVCDVTSEAQ 83 (262)
T ss_pred cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHh-----------cCCceEEEEEccCCCHHH
Confidence 4568999999997 7999999999999999999999887776655544321 011368899999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~ 218 (446)
+++++ +.+|+||||||.... +..++...+++|+.+...+++++.. .+ .++||++||......
T Consensus 84 ~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss~~~~~~ 163 (262)
T PRK07831 84 VDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNASVLGWRA 163 (262)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC
Confidence 87766 468999999995321 1223455578899999998888753 33 468999998654322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-eeecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~~v~~~DvA~ 290 (446)
. .....|+.+|...+.+.+ .+|+++++|+||.++++......... ..........+.+..++|+|+
T Consensus 164 ~------~~~~~Y~~sKaal~~~~~~la~e~~~~gI~v~~i~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~~va~ 237 (262)
T PRK07831 164 Q------HGQAHYAAAKAGVMALTRCSALEAAEYGVRINAVAPSIAMHPFLAKVTSAELLDELAAREAFGRAAEPWEVAN 237 (262)
T ss_pred C------CCCcchHHHHHHHHHHHHHHHHHhCccCeEEEEEeeCCccCcccccccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1 234579999999998876 26899999999999987422110000 000011223456788999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEec
Q 013273 291 LLACMAKNRS-LSYCKVVEVIA 311 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~ 311 (446)
++++++.+.. ...|+++.+.+
T Consensus 238 ~~~~l~s~~~~~itG~~i~v~~ 259 (262)
T PRK07831 238 VIAFLASDYSSYLTGEVVSVSS 259 (262)
T ss_pred HHHHHcCchhcCcCCceEEeCC
Confidence 9999998653 23566666554
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.9e-18 Score=164.23 Aligned_cols=210 Identities=11% Similarity=0.087 Sum_probs=147.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+||||+|+||.++++.|++.|++|++++|++++.+.+.+.+... .+++++.+|+.|.++++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dl~~~~~~~ 69 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKY--------------GNIHYVVGDVSSTESAR 69 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------------CCeEEEECCCCCHHHHH
Confidence 4579999999999999999999999999999999987766554433221 46899999999998887
Q ss_pred HHh-------cCCCEEEEcccCCCCc----cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhh
Q 013273 159 PAL-------GNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAIL 225 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~~----~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~ 225 (446)
+++ +++|.|||++|..... ..++...+++|+.+..++++.+... ..++||++||....... .
T Consensus 70 ~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~~-----~ 144 (238)
T PRK05786 70 NVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSGIYKA-----S 144 (238)
T ss_pred HHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchhcccC-----C
Confidence 665 4579999999854221 1223444678888888888877653 23589999987542111 1
Q ss_pred chhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 226 NLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.....|+.+|...+.+++ ..|+++++||||+++++..... .+. .........+..+|+++++++++.+
T Consensus 145 ~~~~~Y~~sK~~~~~~~~~~~~~~~~~gi~v~~i~pg~v~~~~~~~~---~~~--~~~~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 145 PDQLSYAVAKAGLAKAVEILASELLGRGIRVNGIAPTTISGDFEPER---NWK--KLRKLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCCCCchh---hhh--hhccccCCCCCHHHHHHHHHHHhcc
Confidence 344579999998876654 3699999999999998732110 000 0011112368899999999999976
Q ss_pred CCC-CCCcEEEEecC
Q 013273 299 RSL-SYCKVVEVIAE 312 (446)
Q Consensus 299 ~~~-~~~~v~ni~~~ 312 (446)
... ..++++.+.++
T Consensus 220 ~~~~~~g~~~~~~~~ 234 (238)
T PRK05786 220 EADWVDGVVIPVDGG 234 (238)
T ss_pred cccCccCCEEEECCc
Confidence 442 35666666433
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=7.5e-19 Score=192.08 Aligned_cols=217 Identities=17% Similarity=0.176 Sum_probs=157.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+... .++.++.+|++|.+++
T Consensus 420 l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl~~r~~~~~~~~~~~l~~~--------------~~v~~v~~Dvtd~~~v 485 (681)
T PRK08324 420 LAGKVALVTGAAGGIGKATAKRLAAEGACVVLADLDEEAAEAAAAELGGP--------------DRALGVACDVTDEAAV 485 (681)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHhcc--------------CcEEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999987766554433210 4788999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCC-CEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v-~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++. +.+. ++||++||..+...+
T Consensus 486 ~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~~~~~ 565 (681)
T PRK08324 486 QAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQGLGGSIVFIASKNAVNPG 565 (681)
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcEEEEECCccccCCC
Confidence 7766 378999999995432 223345567899999999977774 4443 699999997653322
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCcc-CCCcccccc-------ccee------ecccCcc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGME-RPTDAYKET-------HNIT------LSQEDTL 278 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~-gp~~~~~~~-------~~~~------~~~~~~~ 278 (446)
.....|+.+|...+.+++. .|+++++|+|+++| +.+...... ..+. .......
T Consensus 566 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~Pg~v~~~t~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 639 (681)
T PRK08324 566 ------PNFGAYGAAKAAELHLVRQLALELGPDGIRVNGVNPDAVVRGSGIWTGEWIEARAAAYGLSEEELEEFYRARNL 639 (681)
T ss_pred ------CCcHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeCceeecCCccccchhhhhhhhhccCChHHHHHHHHhcCC
Confidence 2346799999999988762 57999999999997 443111000 0000 0112233
Q ss_pred cCCccCHHHHHHHHHHHHhC-CCCCCCcEEEEecCCC
Q 013273 279 FGGQVSNLQVAELLACMAKN-RSLSYCKVVEVIAETT 314 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~-~~~~~~~v~ni~~~~~ 314 (446)
.+.+++++|+|+++++++.. .....+++|++.++..
T Consensus 640 l~~~v~~~DvA~a~~~l~s~~~~~~tG~~i~vdgG~~ 676 (681)
T PRK08324 640 LKREVTPEDVAEAVVFLASGLLSKTTGAIITVDGGNA 676 (681)
T ss_pred cCCccCHHHHHHHHHHHhCccccCCcCCEEEECCCch
Confidence 45689999999999999853 2225688999987753
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.6e-18 Score=169.18 Aligned_cols=217 Identities=15% Similarity=0.160 Sum_probs=151.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++++|||| |+||+++++.|+ +|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++.+
T Consensus 2 ~k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~i~~ 66 (275)
T PRK06940 2 KEVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREA---------G----FDVSTQEVDVSSRESVKA 66 (275)
T ss_pred CCEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEeecCCHHHHHH
Confidence 468999997 799999999996 8999999999987766655544321 1 468899999999988887
Q ss_pred Hh------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC-----------
Q 013273 160 AL------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF----------- 220 (446)
Q Consensus 160 a~------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~----------- 220 (446)
++ +++|+||||||... ...++...+++|+.++.++++++... .-+++|++||........
T Consensus 67 ~~~~~~~~g~id~li~nAG~~~-~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~~~~~~~~~~~~ 145 (275)
T PRK06940 67 LAATAQTLGPVTGLVHTAGVSP-SQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSGHRLPALTAEQERALAT 145 (275)
T ss_pred HHHHHHhcCCCCEEEECCCcCC-chhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEecccccCcccchhhhccccc
Confidence 76 46899999999653 23456778999999999999988653 124678888865432210
Q ss_pred -------------chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc---ce-eecccC
Q 013273 221 -------------PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH---NI-TLSQED 276 (446)
Q Consensus 221 -------------~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~---~~-~~~~~~ 276 (446)
+......+..|+.+|+..+.+.+ ..|++++.|+||++.++........ .. ......
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gIrvn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~ 225 (275)
T PRK06940 146 TPTEELLSLPFLQPDAIEDSLHAYQIAKRANALRVMAEAVKWGERGARINSISPGIISTPLAQDELNGPRGDGYRNMFAK 225 (275)
T ss_pred cccccccccccccccccCCccchhHHHHHHHHHHHHHHHHHHccCCeEEEEeccCcCcCccchhhhcCCchHHHHHHhhh
Confidence 00000234679999999887765 3689999999999988732110000 00 000011
Q ss_pred cccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 277 ~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
...+.+..++|+|+++++++.+.. ...|+++.+-++
T Consensus 226 ~p~~r~~~peeia~~~~fL~s~~~~~itG~~i~vdgg 262 (275)
T PRK06940 226 SPAGRPGTPDEIAALAEFLMGPRGSFITGSDFLVDGG 262 (275)
T ss_pred CCcccCCCHHHHHHHHHHHcCcccCcccCceEEEcCC
Confidence 223457899999999999997543 345777776555
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.81 E-value=5.8e-19 Score=187.31 Aligned_cols=214 Identities=17% Similarity=0.175 Sum_probs=156.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+ + .++.++.+|++|.++
T Consensus 266 ~~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~ 329 (520)
T PRK06484 266 AESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEAL------------G----DEHLSVQADITDEAA 329 (520)
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CceeEEEccCCCHHH
Confidence 346789999999999999999999999999999999987766554322 1 457788999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +.+|+||||||.... +..+++..+++|+.++.++++++... +.++||++||.......
T Consensus 330 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 408 (520)
T PRK06484 330 VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIASLLAL- 408 (520)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhhcCCC-
Confidence 88776 458999999996421 12234566889999999999998753 34699999997664321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cceee--cccCcccCCccCHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITL--SQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~~--~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++....... ..... .......+.+..++|+|+
T Consensus 409 -----~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dia~ 483 (520)
T PRK06484 409 -----PPRNAYCASKAAVTMLSRSLACEWAPAGIRVNTVAPGYIETPAVLALKASGRADFDSIRRRIPLGRLGDPEEVAE 483 (520)
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCchhhhhccccHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 234579999999997765 268999999999998874211000 00000 001122345678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.+.. ...|+++.+.++
T Consensus 484 ~~~~l~s~~~~~~~G~~i~vdgg 506 (520)
T PRK06484 484 AIAFLASPAASYVNGATLTVDGG 506 (520)
T ss_pred HHHHHhCccccCccCcEEEECCC
Confidence 9999997543 346778877655
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.3e-18 Score=165.81 Aligned_cols=213 Identities=18% Similarity=0.149 Sum_probs=147.4
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCc-----------hhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSV-----------QRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~-----------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
+++++||||||+| +||.++++.|+++|++|++++|++ .....+.+.+... + .++
T Consensus 3 l~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 69 (256)
T PRK12748 3 LMKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESY---------G----VRC 69 (256)
T ss_pred CCCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCCccccccccccchhhHHHHHHHHHhc---------C----CeE
Confidence 3457899999995 799999999999999999999972 1111122222211 1 468
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC----CCCEE
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA----KVNHF 207 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~ 207 (446)
+++.+|++|.+++..++ +.+|+||||||..... ..+++..+++|+.++.++++++... +.++|
T Consensus 70 ~~~~~D~~~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~i 149 (256)
T PRK12748 70 EHMEIDLSQPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYDGKAGGRI 149 (256)
T ss_pred EEEECCCCCHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcCCeEE
Confidence 99999999988877665 4589999999864221 1223445789999999999988543 45699
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccC
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 280 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~ 280 (446)
|++||.....+. .....|+.+|+..|.+++ ..|++++.|+||.+.++.........+ . .....+
T Consensus 150 v~~ss~~~~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~~~t~~~~~~~~~~~-~--~~~~~~ 220 (256)
T PRK12748 150 INLTSGQSLGPM------PDELAYAATKGAIEAFTKSLAPELAEKGITVNAVNPGPTDTGWITEELKHHL-V--PKFPQG 220 (256)
T ss_pred EEECCccccCCC------CCchHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEEeCcccCCCCChhHHHhh-h--ccCCCC
Confidence 999997653321 234579999999998765 268999999999998763211000000 0 011122
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.+..++|+|+++.+++.... ...++++++.++
T Consensus 221 ~~~~~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 253 (256)
T PRK12748 221 RVGEPVDAARLIAFLVSEEAKWITGQVIHSEGG 253 (256)
T ss_pred CCcCHHHHHHHHHHHhCcccccccCCEEEecCC
Confidence 35678999999999887643 234788888654
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.3e-18 Score=167.54 Aligned_cols=212 Identities=14% Similarity=0.077 Sum_probs=146.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|+||||+|+||++++++|+++|++|++++|+..+...+.+.+ ...++.+|++|.+++
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~------------------~~~~~~~D~~~~~~~ 66 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEV------------------GGLFVPTDVTDEDAV 66 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHc------------------CCcEEEeeCCCHHHH
Confidence 45789999999999999999999999999999999876655433211 125788999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++.+. +.+.+++|++||.....
T Consensus 67 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~g~iv~~sS~~~~~- 145 (255)
T PRK06057 67 NALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQGKGSIINTASFVAVM- 145 (255)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHhCCcEEEEEcchhhcc-
Confidence 87774 67999999986421 111234567789999988877764 34556899999864322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce-eec--ccCcccCCccCHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLS--QEDTLFGGQVSNLQV 288 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~-~~~--~~~~~~~~~v~~~Dv 288 (446)
+. ......|+.+|+..+.+.+ ..|+++++||||++.++.......... ... ......+.+..++|+
T Consensus 146 g~----~~~~~~Y~~sKaal~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (255)
T PRK06057 146 GS----ATSQISYTASKGGVLAMSRELGVQFARQGIRVNALCPGPVNTPLLQELFAKDPERAARRLVHVPMGRFAEPEEI 221 (255)
T ss_pred CC----CCCCcchHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCCcCCchhhhhccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence 11 1234569999987665544 368999999999999874221100000 000 001113457889999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|++++.++.+.. ...++.+.+.++
T Consensus 222 a~~~~~l~~~~~~~~~g~~~~~~~g 246 (255)
T PRK06057 222 AAAVAFLASDDASFITASTFLVDGG 246 (255)
T ss_pred HHHHHHHhCccccCccCcEEEECCC
Confidence 999999887643 234667766554
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=99.81 E-value=1.8e-18 Score=165.89 Aligned_cols=213 Identities=16% Similarity=0.177 Sum_probs=149.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++++||||+|+||+++++.|++.|++|+++.|+......+.+.+... + .++.++.+|++|.+++.++
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~i~~~ 67 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQA---------G----GKAVAYKLDVSDKDQVFSA 67 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHHHHHH
Confidence 47999999999999999999999999999999977666655544321 1 4688999999999988877
Q ss_pred h-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCch
Q 013273 161 L-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~~ 222 (446)
+ ..+|+||||+|.... +..+++..+++|+.++..+++++.+ .+ .++||++||.......
T Consensus 68 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--- 144 (254)
T TIGR02415 68 IDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASIAGHEGN--- 144 (254)
T ss_pred HHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecchhhcCCC---
Confidence 5 357999999986422 2233445688999999887776643 23 2699999996553221
Q ss_pred hhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccccc--c---eeec------ccCcccCCccC
Q 013273 223 AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--N---ITLS------QEDTLFGGQVS 284 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~--~---~~~~------~~~~~~~~~v~ 284 (446)
.....|+.+|+..|.+++. .|+++++|+||++.++........ . .... ......+.+.+
T Consensus 145 ---~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~i~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (254)
T TIGR02415 145 ---PILSAYSSTKFAVRGLTQTAAQELAPKGITVNAYCPGIVKTPMWEEIDEETSEIAGKPIGEGFEEFSSEIALGRPSE 221 (254)
T ss_pred ---CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccChhhhhhhhhhhhcccCchHHHHHHHHhhCCCCCCCC
Confidence 2345699999999877652 589999999999977632110000 0 0000 01112345789
Q ss_pred HHHHHHHHHHHHhCCCC-CCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRSL-SYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~-~~~~v~ni~~~ 312 (446)
++|+++++.+++.+... ..+.++.+-++
T Consensus 222 ~~~~a~~~~~l~~~~~~~~~g~~~~~d~g 250 (254)
T TIGR02415 222 PEDVAGLVSFLASEDSDYITGQSILVDGG 250 (254)
T ss_pred HHHHHHHHHhhcccccCCccCcEEEecCC
Confidence 99999999999987642 24555544443
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=166.75 Aligned_cols=195 Identities=15% Similarity=0.101 Sum_probs=138.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|+||||+|+||+++++.|+++|++|++++|+.++.+.+.+ .+++++.+|+.|.+++.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~~~~~ 63 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMNS-------------------LGFTGILLDLDDPESVERA 63 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHHh-------------------CCCeEEEeecCCHHHHHHH
Confidence 589999999999999999999999999999999876554321 2478889999998877665
Q ss_pred h--------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHH----HHHHHhCCCCEEEEEccccccCCCCch
Q 013273 161 L--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNL----VDAATIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~--------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l----~~aa~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+ +.+|.||||+|.... +..+++..+++|+.|+.++ ++.+++.+.++||++||......
T Consensus 64 ~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~~iv~~ss~~~~~~---- 139 (256)
T PRK08017 64 ADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPHGEGRIVMTSSVMGLIS---- 139 (256)
T ss_pred HHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCEEEEEcCcccccC----
Confidence 4 357999999985421 2223345678899888776 55556677789999999754322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc--ceeecccCcccCCccCHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~--~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...|.+.+ ..|++++++|||.+.++........ .............+++++|+++++.
T Consensus 140 --~~~~~~Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~~~~ 217 (256)
T PRK08017 140 --TPGRGAYAASKYALEAWSDALRMELRHSGIKVSLIEPGPIRTRFTDNVNQTQSDKPVENPGIAARFTLGPEAVVPKLR 217 (256)
T ss_pred --CCCccHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEeCCCcccchhhcccchhhccchhhhHHHhhcCCCHHHHHHHHH
Confidence 1234579999999987643 4789999999999876521110000 0000001111124699999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
.++.++.
T Consensus 218 ~~~~~~~ 224 (256)
T PRK08017 218 HALESPK 224 (256)
T ss_pred HHHhCCC
Confidence 9998775
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=169.03 Aligned_cols=202 Identities=17% Similarity=0.153 Sum_probs=142.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++++||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+... + ...+.++.+|+.|.+++.++
T Consensus 1 k~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~D~~~~~~~~~~ 68 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARAL---------G---GTVPEHRALDISDYDAVAAF 68 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C---CCcceEEEeeCCCHHHHHHH
Confidence 47999999999999999999999999999999887766655444321 1 12356688999998887765
Q ss_pred h-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCCCch
Q 013273 161 L-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+ +++|+||||+|.... +..++...+++|+.++.++++++.. ...++||++||......
T Consensus 69 ~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~~~---- 144 (272)
T PRK07832 69 AADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAAGLVA---- 144 (272)
T ss_pred HHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccccccCC----
Confidence 5 458999999986422 2223455688999999999998742 23469999999754221
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-----eee-cccCcccCCccCHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-----ITL-SQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-----~~~-~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++......... ... .......+..++++|+|
T Consensus 145 --~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vA 222 (272)
T PRK07832 145 --LPWHAAYSASKFGLRGLSEVLRFDLARHGIGVSVVVPGAVKTPLVNTVEIAGVDREDPRVQKWVDRFRGHAVTPEKAA 222 (272)
T ss_pred --CCCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhcccccccCcchhhHHHHHHhcccCCCCHHHHH
Confidence 1224469999987776653 47899999999999987432110000 000 00011233468999999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
++++.++.+..
T Consensus 223 ~~~~~~~~~~~ 233 (272)
T PRK07832 223 EKILAGVEKNR 233 (272)
T ss_pred HHHHHHHhcCC
Confidence 99999997543
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2e-18 Score=166.69 Aligned_cols=216 Identities=17% Similarity=0.121 Sum_probs=149.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+... ....+.+... + .++.++.+|+.|.+++
T Consensus 4 ~~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~-~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~v 69 (263)
T PRK08226 4 LTGKTALITGALQGIGEGIARVFARHGANLILLDISPEI-EKLADELCGR---------G----HRCTAVVADVRDPASV 69 (263)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHH-HHHHHHHHHh---------C----CceEEEECCCCCHHHH
Confidence 456899999999999999999999999999999998643 2222222211 1 4688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++. .+|+||||||..... ..+++..+++|+.++.++++++.+ .+.++||++||........
T Consensus 70 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 149 (263)
T PRK08226 70 AAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMIARKDGRIVMMSSVTGDMVAD 149 (263)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEECcHHhcccCC
Confidence 87763 679999999964221 122334578899999999888753 3556999999965422211
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc------ccc-e-eecccCcccCCccCH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE------THN-I-TLSQEDTLFGGQVSN 285 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~------~~~-~-~~~~~~~~~~~~v~~ 285 (446)
.....|+.+|...|.+++ ..|++++.|+||++.++...... ... . .........+.+..+
T Consensus 150 -----~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 224 (263)
T PRK08226 150 -----PGETAYALTKAAIVGLTKSLAVEYAQSGIRVNAICPGYVRTPMAESIARQSNPEDPESVLTEMAKAIPLRRLADP 224 (263)
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccCHHHHhhhhhccCCCcHHHHHHHhccCCCCCCCCH
Confidence 234569999999987765 25899999999999887321100 000 0 000011123446799
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+|+++.+++.... ...++++.+.++
T Consensus 225 ~~va~~~~~l~~~~~~~~~g~~i~~dgg 252 (263)
T PRK08226 225 LEVGELAAFLASDESSYLTGTQNVIDGG 252 (263)
T ss_pred HHHHHHHHHHcCchhcCCcCceEeECCC
Confidence 999999999986532 345677766555
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=168.10 Aligned_cols=215 Identities=10% Similarity=0.077 Sum_probs=146.8
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++++||||++ +||+++++.|+++|++|++..|+. ...+..+++... . +...++.+|++|.+
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~-~~~~~~~~l~~~--------~-----g~~~~~~~Dv~~~~ 71 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSE-VLEKRVKPLAEE--------I-----GCNFVSELDVTNPK 71 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCch-HHHHHHHHHHHh--------c-----CCceEEEccCCCHH
Confidence 4568999999997 899999999999999999998874 222222222211 0 12346789999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|++|||||.... +..++...+++|+.+...+++++... .-++||++||.+..
T Consensus 72 ~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~ 151 (260)
T PRK06603 72 SISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMHDGGSIVTLTYYGAE 151 (260)
T ss_pred HHHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhccCceEEEEecCccc
Confidence 888776 568999999986421 22234556889999999998887532 22589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~D 287 (446)
.. ...+..|+.+|+..+.+.+ .+|++++.|.||++.++....... ... .........+.+..++|
T Consensus 152 ~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 225 (260)
T PRK06603 152 KV------IPNYNVMGVAKAALEASVKYLANDMGENNIRVNAISAGPIKTLASSAIGDFSTMLKSHAATAPLKRNTTQED 225 (260)
T ss_pred cC------CCcccchhhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcCcchhhhcCCCcHHHHHHHHhcCCcCCCCCHHH
Confidence 21 1224569999999987765 378999999999997763110000 000 00001122345688999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+++++++.+.. ...++++.+.++
T Consensus 226 va~~~~~L~s~~~~~itG~~i~vdgG 251 (260)
T PRK06603 226 VGGAAVYLFSELSKGVTGEIHYVDCG 251 (260)
T ss_pred HHHHHHHHhCcccccCcceEEEeCCc
Confidence 9999999998643 345677766554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.3e-18 Score=168.45 Aligned_cols=215 Identities=13% Similarity=0.096 Sum_probs=145.9
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++++++|||| +++||+++++.|+++|++|++..|+. +..+..+++... . +...++++|++|.+
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~-~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~ 69 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACREQGAELAFTYVVD-KLEERVRKMAAE---------L----DSELVFRCDVASDD 69 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHhc---------c----CCceEEECCCCCHH
Confidence 45679999997 67999999999999999999988763 222222222211 1 23467899999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCCc-----------cCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEcccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEKE-----------VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~~-----------~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~ 214 (446)
++++++ +++|++|||||..... ..+++..+++|+.+...+.+++... +.++||++||.+
T Consensus 70 ~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~~g~Iv~iss~~ 149 (261)
T PRK08690 70 EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGRNSAIVALSYLG 149 (261)
T ss_pred HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhcCcEEEEEcccc
Confidence 888776 4689999999964321 1123344678999988888776431 225899999976
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSN 285 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~ 285 (446)
.... ...+..|+.+|...+.+.+ .+|++++.|.||++.++....... .... ........+.+..+
T Consensus 150 ~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p 223 (261)
T PRK08690 150 AVRA------IPNYNVMGMAKASLEAGIRFTAACLGKEGIRCNGISAGPIKTLAASGIADFGKLLGHVAAHNPLRRNVTI 223 (261)
T ss_pred cccC------CCCcccchhHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccchhhhcCCchHHHHHHHhhcCCCCCCCCH
Confidence 5322 1234569999999987755 378999999999998763110000 0000 00111234457899
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|||+++++++.+.. ...++++.+.++
T Consensus 224 eevA~~v~~l~s~~~~~~tG~~i~vdgG 251 (261)
T PRK08690 224 EEVGNTAAFLLSDLSSGITGEITYVDGG 251 (261)
T ss_pred HHHHHHHHHHhCcccCCcceeEEEEcCC
Confidence 999999999998643 346777766555
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.8e-18 Score=165.11 Aligned_cols=214 Identities=14% Similarity=0.083 Sum_probs=149.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||++++++|++.|++|++++|+.. .+..+.+... + .++.++++|++|.+++
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~--~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~~ 72 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEP--TETIEQVTAL---------G----RRFLSLTADLRKIDGI 72 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcch--HHHHHHHHhc---------C----CeEEEEECCCCCHHHH
Confidence 55689999999999999999999999999998877543 2222223221 1 4688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++... + -+++|++||.......
T Consensus 73 ~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 152 (253)
T PRK08993 73 PALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSFQGG 152 (253)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhccCC
Confidence 8776 368999999996421 22345667899999999998887532 2 3589999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee--ecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~--~~~~~~~~~~~v~~~DvA~ 290 (446)
..+..|+.+|...|.+.+ ..|++++.|+||++.++........... ........+.+..++|+|+
T Consensus 153 ------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~eva~ 226 (253)
T PRK08993 153 ------IRVPSYTASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMG 226 (253)
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHhhhhCeEEEEEeeCcccCcchhhhccchHHHHHHHhcCCCCCCcCHHHHHH
Confidence 123469999999987765 2689999999999987642111000000 0001112345788999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.+.. ...|+++.+.++
T Consensus 227 ~~~~l~s~~~~~~~G~~~~~dgg 249 (253)
T PRK08993 227 PVVFLASSASDYINGYTIAVDGG 249 (253)
T ss_pred HHHHHhCccccCccCcEEEECCC
Confidence 9999998653 235666666443
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.8e-19 Score=170.39 Aligned_cols=207 Identities=14% Similarity=0.128 Sum_probs=148.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+..+.. ..++.++.+|++|.+++
T Consensus 7 l~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----------------------~~~~~~~~~D~~~~~~~ 64 (266)
T PRK06171 7 LQGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----------------------HENYQFVPTDVSSAEEV 64 (266)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----------------------cCceEEEEccCCCHHHH
Confidence 56789999999999999999999999999999999875421 14688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC---------------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEc
Q 013273 158 EPAL-------GNASVVICCIGASEK---------------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVS 211 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~---------------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vS 211 (446)
++++ +.+|+||||||.... ...+++..+++|+.++.++++++.. .+.++||++|
T Consensus 65 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~is 144 (266)
T PRK06171 65 NHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQHDGVIVNMS 144 (266)
T ss_pred HHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhcCCcEEEEEc
Confidence 8766 468999999995321 1122344678999999999988864 3456899999
Q ss_pred cccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCcc-CCCcc--ccccc--------c-e--
Q 013273 212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGME-RPTDA--YKETH--------N-I-- 270 (446)
Q Consensus 212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~-gp~~~--~~~~~--------~-~-- 270 (446)
|....... .....|+.+|...+.+++ ..|+++++|+||.+. .+... +.... . .
T Consensus 145 S~~~~~~~------~~~~~Y~~sK~a~~~l~~~la~e~~~~gi~v~~v~pG~~~~t~~~~~~~~~~~~~~~~~~~~~~~~ 218 (266)
T PRK06171 145 SEAGLEGS------EGQSCYAATKAALNSFTRSWAKELGKHNIRVVGVAPGILEATGLRTPEYEEALAYTRGITVEQLRA 218 (266)
T ss_pred cccccCCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeccccccCCCcChhhhhhhccccCCCHHHHHh
Confidence 97653221 234579999999987765 268999999999985 22110 00000 0 0
Q ss_pred eecc-cCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 271 TLSQ-EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 271 ~~~~-~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.+.. .....+.+..++|||+++.+++.+.. ...++++++.++
T Consensus 219 ~~~~~~~~p~~r~~~~~eva~~~~fl~s~~~~~itG~~i~vdgg 262 (266)
T PRK06171 219 GYTKTSTIPLGRSGKLSEVADLVCYLLSDRASYITGVTTNIAGG 262 (266)
T ss_pred hhcccccccCCCCCCHHHhhhheeeeeccccccceeeEEEecCc
Confidence 0000 01223456889999999999997643 346777777655
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=164.39 Aligned_cols=184 Identities=15% Similarity=0.113 Sum_probs=141.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+||||+|+||+++++.|+++|+ +|++++|+.++... ...++.++.+|+.|.++
T Consensus 4 ~~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~--------------------~~~~~~~~~~D~~~~~~ 63 (238)
T PRK08264 4 IKGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD--------------------LGPRVVPLQLDVTDPAS 63 (238)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh--------------------cCCceEEEEecCCCHHH
Confidence 4567999999999999999999999998 99999998765432 01578999999999999
Q ss_pred HHHHhc---CCCEEEEcccC-CCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 157 IEPALG---NASVVICCIGA-SEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 157 ~~~a~~---~~D~VI~~Ag~-~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++++. .+|+|||++|. ... ...++...+++|+.++.++++++. +.+.++||++||......
T Consensus 64 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~v~~sS~~~~~~---- 139 (238)
T PRK08264 64 VAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAANGGGAIVNVLSVLSWVN---- 139 (238)
T ss_pred HHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcChhhccC----
Confidence 888775 58999999997 221 112234457789999999998875 456779999999765321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
......|+.+|..+|.+++ ..|++++++|||.+.++.... ..+..++..|+++.++..
T Consensus 140 --~~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~~~~-------------~~~~~~~~~~~a~~~~~~ 204 (238)
T PRK08264 140 --FPNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDMAAG-------------LDAPKASPADVARQILDA 204 (238)
T ss_pred --CCCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCccccccccc-------------CCcCCCCHHHHHHHHHHH
Confidence 2344579999999987765 258999999999998763110 112268899999999999
Q ss_pred HhCCC
Q 013273 296 AKNRS 300 (446)
Q Consensus 296 l~~~~ 300 (446)
+....
T Consensus 205 ~~~~~ 209 (238)
T PRK08264 205 LEAGD 209 (238)
T ss_pred HhCCC
Confidence 88653
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.3e-18 Score=165.39 Aligned_cols=198 Identities=16% Similarity=0.111 Sum_probs=144.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.++...+..+++. ..++.++.+|+.|.+++
T Consensus 3 ~~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~d~~~~ 68 (263)
T PRK09072 3 LKDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPY--------------PGRHRWVVADLTSEAGR 68 (263)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhc--------------CCceEEEEccCCCHHHH
Confidence 3467899999999999999999999999999999998776665544310 15789999999999888
Q ss_pred HHHh------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCc
Q 013273 158 EPAL------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +.+|+||||||..... ..++...+++|+.++.++++++.. .+.++||++||...... .
T Consensus 69 ~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~-~- 146 (263)
T PRK09072 69 EAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQPSAMVVNVGSTFGSIG-Y- 146 (263)
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEecChhhCcC-C-
Confidence 7765 4689999999864321 122344577999999999988854 34568999998654221 1
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...+.+++ ..|++++++.||++.++..... . . ...........+++|+|++++.
T Consensus 147 ----~~~~~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~Pg~~~t~~~~~~-~-~---~~~~~~~~~~~~~~~va~~i~~ 217 (263)
T PRK09072 147 ----PGYASYCASKFALRGFSEALRRELADTGVRVLYLAPRATRTAMNSEA-V-Q---ALNRALGNAMDDPEDVAAAVLQ 217 (263)
T ss_pred ----CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccccchhhh-c-c---cccccccCCCCCHHHHHHHHHH
Confidence 223569999998876654 3689999999999977632110 0 0 0011112245789999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++++..
T Consensus 218 ~~~~~~ 223 (263)
T PRK09072 218 AIEKER 223 (263)
T ss_pred HHhCCC
Confidence 999764
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.5e-18 Score=164.90 Aligned_cols=218 Identities=14% Similarity=0.093 Sum_probs=155.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.++...+.+++... ...++.++.+|++|.+++
T Consensus 5 ~~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~D~~~~~~~ 72 (259)
T PRK06125 5 LAGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAA------------HGVDVAVHALDLSSPEAR 72 (259)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhh------------cCCceEEEEecCCCHHHH
Confidence 35689999999999999999999999999999999988776665544321 014688999999999988
Q ss_pred HHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhh
Q 013273 158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
.+++ +.+|+||||+|.... +..++...+++|+.+..++++++. +.+.+++|++||.....+
T Consensus 73 ~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~iss~~~~~~------ 146 (259)
T PRK06125 73 EQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKARGSGVIVNVIGAAGENP------ 146 (259)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEecCccccCC------
Confidence 8766 568999999996422 222345567899999998888773 344568999999765322
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c--------cc-ceeecccCcccCCccCHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E--------TH-NITLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~--------~~-~~~~~~~~~~~~~~v~~~D 287 (446)
......|..+|...+.+.+ ..|++++.|+||.+.++..... . .. .+.........+.+..++|
T Consensus 147 ~~~~~~y~ask~al~~~~~~la~e~~~~gi~v~~i~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (259)
T PRK06125 147 DADYICGSAGNAALMAFTRALGGKSLDDGVRVVGVNPGPVATDRMLTLLKGRARAELGDESRWQELLAGLPLGRPATPEE 226 (259)
T ss_pred CCCchHhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccHHHHHHHHhhhhcccCCHHHHHHHhccCCcCCCcCHHH
Confidence 1234568999999887765 2689999999999987631100 0 00 0000001112345688999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...|.++.+.++.
T Consensus 227 va~~~~~l~~~~~~~~~G~~i~vdgg~ 253 (259)
T PRK06125 227 VADLVAFLASPRSGYTSGTVVTVDGGI 253 (259)
T ss_pred HHHHHHHHcCchhccccCceEEecCCe
Confidence 9999999997543 2467777776653
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=166.40 Aligned_cols=215 Identities=12% Similarity=0.093 Sum_probs=146.0
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++++|||| +++||+++++.|+++|++|++..|.....+.+ +++.+. . +...++.+|++|.+
T Consensus 4 l~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~-~~~~~~---------~----~~~~~~~~Dv~d~~ 69 (260)
T PRK06997 4 LAGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRI-TEFAAE---------F----GSDLVFPCDVASDE 69 (260)
T ss_pred cCCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHH-HHHHHh---------c----CCcceeeccCCCHH
Confidence 45689999996 68999999999999999999987652212222 112110 0 22346889999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC-----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~-----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
++++++ +++|++|||||.... +..+++..+++|+.+...+++++... +-+++|++||.+.
T Consensus 70 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~~~g~Ii~iss~~~ 149 (260)
T PRK06997 70 QIDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLGA 149 (260)
T ss_pred HHHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcCCCceEEEEecccc
Confidence 988776 568999999996421 12234556889999999999888653 2368999999765
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|+..+.+.+ .+|++++.|.||++.++....... .... ........+.+..++
T Consensus 150 ~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 223 (260)
T PRK06997 150 ERVV------PNYNTMGLAKASLEASVRYLAVSLGPKGIRANGISAGPIKTLAASGIKDFGKILDFVESNAPLRRNVTIE 223 (260)
T ss_pred ccCC------CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCccccchhccccchhhHHHHHHhcCcccccCCHH
Confidence 3321 224469999999987765 368999999999998752111000 0000 000111234568999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|||+++++++.++. ...++++.+-++
T Consensus 224 dva~~~~~l~s~~~~~itG~~i~vdgg 250 (260)
T PRK06997 224 EVGNVAAFLLSDLASGVTGEITHVDSG 250 (260)
T ss_pred HHHHHHHHHhCccccCcceeEEEEcCC
Confidence 99999999998643 346777766554
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.8e-18 Score=163.75 Aligned_cols=193 Identities=13% Similarity=0.056 Sum_probs=143.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++||||+|+||+++++.|+++|++|++++|+.++...+.+. -+++++.+|+.|.++++++
T Consensus 1 m~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~v~~~ 62 (223)
T PRK05884 1 VEVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKE------------------LDVDAIVCDNTDPASLEEA 62 (223)
T ss_pred CeEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh------------------ccCcEEecCCCCHHHHHHH
Confidence 3699999999999999999999999999999998766544321 1367889999999998887
Q ss_pred hc----CCCEEEEcccCCC----C-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchh
Q 013273 161 LG----NASVVICCIGASE----K-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 161 ~~----~~D~VI~~Ag~~~----~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++ .+|+||||+|... . ...++...+++|+.++.++++++... ..++||++||...
T Consensus 63 ~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~Iv~isS~~~-------- 134 (223)
T PRK05884 63 RGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLRSGGSIISVVPENP-------- 134 (223)
T ss_pred HHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCC--------
Confidence 74 5899999998421 0 12345566899999999999998642 2368999998652
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.....|+.+|+..+.+.+ ..|++++.|.||++..+.... .. .. ..-.++|+|+++.+++
T Consensus 135 --~~~~~Y~asKaal~~~~~~la~e~~~~gI~v~~v~PG~v~t~~~~~-------~~--~~---p~~~~~~ia~~~~~l~ 200 (223)
T PRK05884 135 --PAGSAEAAIKAALSNWTAGQAAVFGTRGITINAVACGRSVQPGYDG-------LS--RT---PPPVAAEIARLALFLT 200 (223)
T ss_pred --CCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccCchhhhh-------cc--CC---CCCCHHHHHHHHHHHc
Confidence 123469999999887765 378999999999997663110 00 00 1127899999999998
Q ss_pred hCCC-CCCCcEEEEecCC
Q 013273 297 KNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 297 ~~~~-~~~~~v~ni~~~~ 313 (446)
.... ...++++.+.++.
T Consensus 201 s~~~~~v~G~~i~vdgg~ 218 (223)
T PRK05884 201 TPAARHITGQTLHVSHGA 218 (223)
T ss_pred CchhhccCCcEEEeCCCe
Confidence 7643 3467777776553
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.80 E-value=3e-18 Score=165.68 Aligned_cols=216 Identities=14% Similarity=0.160 Sum_probs=148.7
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+.+++++||||+ ++||++++++|++.|++|++..|+.+ +..+..+++... + ..+.++.+|++|
T Consensus 4 l~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~d 70 (258)
T PRK07370 4 LTGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEP---------L----NPSLFLPCDVQD 70 (258)
T ss_pred cCCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhc---------c----CcceEeecCcCC
Confidence 356899999986 89999999999999999998877543 222222322211 1 346788999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccc
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 214 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~ 214 (446)
.+++++++ +++|++|||||.... +..+++..+++|+.++..+++++... .-++||++||..
T Consensus 71 ~~~v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~ 150 (258)
T PRK07370 71 DAQIEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLG 150 (258)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEeccc
Confidence 99888766 468999999996421 22345677899999999998887532 226899999976
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSN 285 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~ 285 (446)
.... ......|+.+|...+.+.+ ..|+++++|.||++.++....... ... .........+.+...
T Consensus 151 ~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gI~Vn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~ 224 (258)
T PRK07370 151 GVRA------IPNYNVMGVAKAALEASVRYLAAELGPKNIRVNAISAGPIRTLASSAVGGILDMIHHVEEKAPLRRTVTQ 224 (258)
T ss_pred cccC------CcccchhhHHHHHHHHHHHHHHHHhCcCCeEEEEEecCcccCchhhccccchhhhhhhhhcCCcCcCCCH
Confidence 5321 1234579999999988765 368999999999998763211000 000 000011223456789
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+|+++++++.+.. ...++++.+.++
T Consensus 225 ~dva~~~~fl~s~~~~~~tG~~i~vdgg 252 (258)
T PRK07370 225 TEVGNTAAFLLSDLASGITGQTIYVDAG 252 (258)
T ss_pred HHHHHHHHHHhChhhccccCcEEEECCc
Confidence 999999999997643 235677766554
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.80 E-value=4.2e-18 Score=164.93 Aligned_cols=220 Identities=25% Similarity=0.234 Sum_probs=168.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++++++|+++|++|++++|++++...+. .++++..+|+.++..+..+
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~~~~~~v~~~~r~~~~~~~~~--------------------~~v~~~~~d~~~~~~l~~a 60 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELLARGHEVRAAVRNPEAAAALA--------------------GGVEVVLGDLRDPKSLVAG 60 (275)
T ss_pred CeEEEEecccchHHHHHHHHHhCCCEEEEEEeCHHHHHhhc--------------------CCcEEEEeccCCHhHHHHH
Confidence 47999999999999999999999999999999998876531 5799999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
+.++|.++++.+... ... ........+..+..+++. .++++++++|..+... .....|..+|...|.
T Consensus 61 ~~G~~~~~~i~~~~~-~~~---~~~~~~~~~~~~~a~~a~-~~~~~~~~~s~~~~~~--------~~~~~~~~~~~~~e~ 127 (275)
T COG0702 61 AKGVDGVLLISGLLD-GSD---AFRAVQVTAVVRAAEAAG-AGVKHGVSLSVLGADA--------ASPSALARAKAAVEA 127 (275)
T ss_pred hccccEEEEEecccc-ccc---chhHHHHHHHHHHHHHhc-CCceEEEEeccCCCCC--------CCccHHHHHHHHHHH
Confidence 999999999987643 111 122334444555555544 4578999999887643 123469999999999
Q ss_pred HHHhCCCCEEEEecCCccC-CCcccc---cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 013273 241 ALIASGLPYTIVRPGGMER-PTDAYK---ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~g-p~~~~~---~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t 316 (446)
.+++.|+.++++|+..+|. ....+. ................++..+|+++++...+..+. ..+++|++.++...+
T Consensus 128 ~l~~sg~~~t~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~a~~~~~~l~~~~-~~~~~~~l~g~~~~~ 206 (275)
T COG0702 128 ALRSSGIPYTTLRRAAFYLGAGAAFIEAAEAAGLPVIPRGIGRLSPIAVDDVAEALAAALDAPA-TAGRTYELAGPEALT 206 (275)
T ss_pred HHHhcCCCeEEEecCeeeeccchhHHHHHHhhCCceecCCCCceeeeEHHHHHHHHHHHhcCCc-ccCcEEEccCCceec
Confidence 9999999999999666554 332210 01111111111113367999999999999999887 779999999998889
Q ss_pred hhhHHHHHHhccCCCCCC
Q 013273 317 LTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 317 ~~~i~e~l~~i~~~~~~~ 334 (446)
..++.+.+....++....
T Consensus 207 ~~~~~~~l~~~~gr~~~~ 224 (275)
T COG0702 207 LAELASGLDYTIGRPVGL 224 (275)
T ss_pred HHHHHHHHHHHhCCccee
Confidence 999999999999888764
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.7e-18 Score=165.99 Aligned_cols=217 Identities=13% Similarity=0.113 Sum_probs=147.1
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++++||||+ ++||+++++.|+++|++|++++|+....+.+.+..++. ...++.++.+|++|.+
T Consensus 5 ~~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d~~ 72 (257)
T PRK08594 5 LEGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTL------------EGQESLLLPCDVTSDE 72 (257)
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHc------------CCCceEEEecCCCCHH
Confidence 456899999997 89999999999999999999987643222222211111 0146889999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +.+|++|||||.... +..++...+++|+.+...+++++... ..++||++||....
T Consensus 73 ~v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~ 152 (257)
T PRK08594 73 EITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGGE 152 (257)
T ss_pred HHHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCCc
Confidence 887765 468999999985421 11123345788999998888887643 23589999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~~D 287 (446)
... .....|+.+|...+.+.+ .+|++++.|+||++.++....... .... ........+.+..++|
T Consensus 153 ~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~~ 226 (257)
T PRK08594 153 RVV------QNYNVMGVAKASLEASVKYLANDLGKDGIRVNAISAGPIRTLSAKGVGGFNSILKEIEERAPLRRTTTQEE 226 (257)
T ss_pred cCC------CCCchhHHHHHHHHHHHHHHHHHhhhcCCEEeeeecCcccCHhHhhhccccHHHHHHhhcCCccccCCHHH
Confidence 321 223479999999988765 368999999999998763110000 0000 0001112345688999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+++++++.+.. ...++++.+.++
T Consensus 227 va~~~~~l~s~~~~~~tG~~~~~dgg 252 (257)
T PRK08594 227 VGDTAAFLFSDLSRGVTGENIHVDSG 252 (257)
T ss_pred HHHHHHHHcCcccccccceEEEECCc
Confidence 9999999997643 345677766544
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.7e-18 Score=166.39 Aligned_cols=199 Identities=10% Similarity=0.065 Sum_probs=141.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH-------HHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~-------~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.+.. ..+.++++.. ..++.++.+|
T Consensus 4 ~~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-------------~~~~~~~~~D 70 (273)
T PRK08278 4 LSGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAA-------------GGQALPLVGD 70 (273)
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhc-------------CCceEEEEec
Confidence 4567999999999999999999999999999999986532 2222222211 1468899999
Q ss_pred CCChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccc
Q 013273 151 LEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSL 213 (446)
Q Consensus 151 l~d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~ 213 (446)
++|.+++.++++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+.+++|++||.
T Consensus 71 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~g~iv~iss~ 150 (273)
T PRK08278 71 VRDEDQVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPHLKKSENPHILTLSPP 150 (273)
T ss_pred CCCHHHHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHHHHhcCCCEEEEECCc
Confidence 999998887763 68999999996422 1223455678999999999999863 334589999986
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCC-ccCCCcccccccceeecccCcccCCccCH
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~-v~gp~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (446)
...... ...+...|+.+|.++|.+++ ..|++++.|+||+ +..+.... . . ........+..+
T Consensus 151 ~~~~~~----~~~~~~~Y~~sK~a~~~~~~~la~el~~~~I~v~~i~Pg~~i~t~~~~~-----~-~-~~~~~~~~~~~p 219 (273)
T PRK08278 151 LNLDPK----WFAPHTAYTMAKYGMSLCTLGLAEEFRDDGIAVNALWPRTTIATAAVRN-----L-L-GGDEAMRRSRTP 219 (273)
T ss_pred hhcccc----ccCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeCCCccccHHHHh-----c-c-cccccccccCCH
Confidence 432110 01345679999999998876 2689999999995 44432110 0 0 111223356799
Q ss_pred HHHHHHHHHHHhCCC
Q 013273 286 LQVAELLACMAKNRS 300 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~ 300 (446)
+|+|+++++++....
T Consensus 220 ~~va~~~~~l~~~~~ 234 (273)
T PRK08278 220 EIMADAAYEILSRPA 234 (273)
T ss_pred HHHHHHHHHHhcCcc
Confidence 999999999998654
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=6.5e-19 Score=168.84 Aligned_cols=207 Identities=17% Similarity=0.127 Sum_probs=141.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++|+||||+|+||++++++|+++|++|++++|+.. ....+.+ . ...+++++.+|++|.+++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~---~-------------~~~~~~~~~~D~~~~~~~~~ 65 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTENKELTKLAE---Q-------------YNSNLTFHSLDLQDVHELET 65 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCchHHHHHHHh---c-------------cCCceEEEEecCCCHHHHHH
Confidence 68999999999999999999999999999999873 2222211 0 11578899999999999887
Q ss_pred HhcC---------CC--EEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hC-CCCEEEEEcccccc
Q 013273 160 ALGN---------AS--VVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IA-KVNHFIMVSSLGTN 216 (446)
Q Consensus 160 a~~~---------~D--~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~-~v~r~V~vSS~~~~ 216 (446)
+++. .+ ++|||+|.... +..++...+++|+.+...+++.+. +. +.++||++||..+.
T Consensus 66 ~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 145 (251)
T PRK06924 66 NFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSGAAK 145 (251)
T ss_pred HHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecchhhc
Confidence 7742 12 79999985321 222344557789888777666553 32 34689999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCccccc---cccee-e--cccCcccCC
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKE---THNIT-L--SQEDTLFGG 281 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~---~~~~~-~--~~~~~~~~~ 281 (446)
.. ......|+.+|...|.+.+ ..+++++.|+||++.++...... ..... . .......+.
T Consensus 146 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (251)
T PRK06924 146 NP------YFGWSAYCSSKAGLDMFTQTVATEQEEEEYPVKIVAFSPGVMDTNMQAQIRSSSKEDFTNLDRFITLKEEGK 219 (251)
T ss_pred CC------CCCcHHHhHHHHHHHHHHHHHHHHhhhcCCCeEEEEecCCccccHhHHHHHhcCcccchHHHHHHHHhhcCC
Confidence 22 2345679999999998765 14799999999999766321100 00000 0 000112345
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 282 QVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
+.+++|+|++++.++.+.....|+++.+
T Consensus 220 ~~~~~dva~~~~~l~~~~~~~~G~~~~v 247 (251)
T PRK06924 220 LLSPEYVAKALRNLLETEDFPNGEVIDI 247 (251)
T ss_pred cCCHHHHHHHHHHHHhcccCCCCCEeeh
Confidence 7899999999999998744345666544
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=3.2e-18 Score=163.08 Aligned_cols=195 Identities=17% Similarity=0.155 Sum_probs=140.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~ 155 (446)
+++++|+||||+|+||+++++.|+++|++|++++|+.++...+.+++... + ...+.++.+|+.| .+
T Consensus 4 l~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~D~~~~~~~ 71 (239)
T PRK08703 4 LSDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEA---------G---HPEPFAIRFDLMSAEEK 71 (239)
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHc---------C---CCCcceEEeeecccchH
Confidence 45679999999999999999999999999999999998777665554321 1 1356788899975 33
Q ss_pred cHHHH-------h-cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEcccccc
Q 013273 156 QIEPA-------L-GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a-------~-~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~ 216 (446)
++.++ + ..+|+||||||.... ...++...+++|+.++.++++++.+ .+.++||++||....
T Consensus 72 ~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~ss~~~~ 151 (239)
T PRK08703 72 EFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQSPDASVIFVGESHGE 151 (239)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhCCCCEEEEEeccccc
Confidence 34433 3 568999999995321 1122334578999999988888743 355699999996543
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh-------C-CCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------S-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~-gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.. ...+..|+.+|+..+.+++. . ++++++|+||+|+++..... . .......+...+|+
T Consensus 152 ~~------~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~i~v~~v~pG~v~t~~~~~~-----~---~~~~~~~~~~~~~~ 217 (239)
T PRK08703 152 TP------KAYWGGFGASKAALNYLCKVAADEWERFGNLRANVLVPGPINSPQRIKS-----H---PGEAKSERKSYGDV 217 (239)
T ss_pred cC------CCCccchHHhHHHHHHHHHHHHHHhccCCCeEEEEEecCcccCcccccc-----C---CCCCccccCCHHHH
Confidence 22 12345799999999988652 2 69999999999999842110 0 11112346799999
Q ss_pred HHHHHHHHhC
Q 013273 289 AELLACMAKN 298 (446)
Q Consensus 289 A~ai~~ll~~ 298 (446)
+..+++++..
T Consensus 218 ~~~~~~~~~~ 227 (239)
T PRK08703 218 LPAFVWWASA 227 (239)
T ss_pred HHHHHHHhCc
Confidence 9999999985
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.6e-18 Score=168.78 Aligned_cols=214 Identities=14% Similarity=0.071 Sum_probs=148.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc---------hhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~---------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
++++++|||||+++||+++++.|++.|++|++++|+. +....+.+++... + .++.++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~ 70 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAA---------G----GEAVANG 70 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhc---------C----CceEEEe
Confidence 4568999999999999999999999999999998875 4444444443321 1 4688899
Q ss_pred cCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----C---C---CC
Q 013273 149 CDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----A---K---VN 205 (446)
Q Consensus 149 ~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~---~---v~ 205 (446)
+|++|.+++.+++ +++|+||||||.... +..+++..+++|+.++.++++++.. . + .+
T Consensus 71 ~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g 150 (286)
T PRK07791 71 DDIADWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDA 150 (286)
T ss_pred CCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCc
Confidence 9999988877665 568999999996432 2234556688999999999887742 1 1 25
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcc
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL 278 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~ 278 (446)
+||++||....... ..+..|+.+|...+.+.+ ..|++++.|.|| +..+..... ... ........
T Consensus 151 ~Iv~isS~~~~~~~------~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~v~Pg-~~T~~~~~~-~~~-~~~~~~~~ 221 (286)
T PRK07791 151 RIINTSSGAGLQGS------VGQGNYSAAKAGIAALTLVAAAELGRYGVTVNAIAPA-ARTRMTETV-FAE-MMAKPEEG 221 (286)
T ss_pred EEEEeCchhhCcCC------CCchhhHHHHHHHHHHHHHHHHHHHHhCeEEEEECCC-CCCCcchhh-HHH-HHhcCccc
Confidence 89999997653321 234579999999987765 379999999998 543321000 000 00000000
Q ss_pred cCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
......++|+|+++++++.+.. ...|+++.+.++.
T Consensus 222 ~~~~~~pedva~~~~~L~s~~~~~itG~~i~vdgG~ 257 (286)
T PRK07791 222 EFDAMAPENVSPLVVWLGSAESRDVTGKVFEVEGGK 257 (286)
T ss_pred ccCCCCHHHHHHHHHHHhCchhcCCCCcEEEEcCCc
Confidence 0124689999999999997543 3467778776664
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.9e-18 Score=166.35 Aligned_cols=215 Identities=13% Similarity=0.107 Sum_probs=147.4
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++++++||||++ +||+++++.|+++|++|++.+|+. +.....+++... .+.+.++.+|++|.+
T Consensus 4 l~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~ 69 (262)
T PRK07984 4 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ-------------LGSDIVLPCDVAEDA 69 (262)
T ss_pred cCCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecch-hHHHHHHHHHhc-------------cCCceEeecCCCCHH
Confidence 4568999999985 999999999999999999998873 333323333211 134678899999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC-----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~-----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
++++++ +.+|++|||||.... ...+++..+++|+.+...+.+++... .-++||++||.+.
T Consensus 70 ~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~iss~~~ 149 (262)
T PRK07984 70 SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA 149 (262)
T ss_pred HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhcCCcEEEEEecCCC
Confidence 888776 458999999996422 11223455788999988888877532 2258999999765
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeec--ccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~--~~~~~~~~~v~~~ 286 (446)
... ...+..|+.+|...+.+.+ ..|++++.|.||++..+............. ......+.+..++
T Consensus 150 ~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrVn~i~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 223 (262)
T PRK07984 150 ERA------IPNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE 223 (262)
T ss_pred CCC------CCCcchhHHHHHHHHHHHHHHHHHhcccCcEEeeeecCcccchHHhcCCchHHHHHHHHHcCCCcCCCCHH
Confidence 321 1234579999999998875 268999999999998752110000000000 0112234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|||+++++++.+.. ...++++.+.++
T Consensus 224 dva~~~~~L~s~~~~~itG~~i~vdgg 250 (262)
T PRK07984 224 DVGNSAAFLCSDLSAGISGEVVHVDGG 250 (262)
T ss_pred HHHHHHHHHcCcccccccCcEEEECCC
Confidence 99999999997643 345777776555
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.2e-18 Score=162.88 Aligned_cols=216 Identities=15% Similarity=0.120 Sum_probs=147.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++||||+|+||+++++.|+++|++|+++.|+. +....+.+.++.. + .++.++.+|++|.++
T Consensus 5 ~~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~ 71 (261)
T PRK08936 5 LEGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKA---------G----GEAIAVKGDVTVESD 71 (261)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---------C----CeEEEEEecCCCHHH
Confidence 4578999999999999999999999999999988854 3334444433321 1 468889999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCC-CCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~-v~r~V~vSS~~~~~~ 218 (446)
+.+++ +.+|+||||||..... ..+++..+++|+.+..++++++ .+.+ .++||++||......
T Consensus 72 i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~~~~~~ 151 (261)
T PRK08936 72 VVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSVHEQIP 151 (261)
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccccccCC
Confidence 87765 3689999999964321 1234455788988887665544 4443 368999999754322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccce-eecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
...+..|+.+|.+.+.+.+ ..|+++++|+||++.++..... ..... .........+.+...+|++
T Consensus 152 ------~~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va 225 (261)
T PRK08936 152 ------WPLFVHYAASKGGVKLMTETLAMEYAPKGIRVNNIGPGAINTPINAEKFADPKQRADVESMIPMGYIGKPEEIA 225 (261)
T ss_pred ------CCCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECcCCCCccccccCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 2334579999988776654 3689999999999988742211 00000 0001112234578899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.+.. ...+.++.+.++
T Consensus 226 ~~~~~l~s~~~~~~~G~~i~~d~g 249 (261)
T PRK08936 226 AVAAWLASSEASYVTGITLFADGG 249 (261)
T ss_pred HHHHHHcCcccCCccCcEEEECCC
Confidence 99999998653 235566665544
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=99.79 E-value=8.3e-18 Score=163.18 Aligned_cols=214 Identities=16% Similarity=0.111 Sum_probs=143.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH--
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI-- 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~-- 157 (446)
++++||||+|+||+++++.|+++|++|+++.|+ .+....+.+++... ...++.++.+|++|.+++
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~~~~~ 69 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNAR------------RPNSAVTCQADLSNSATLFS 69 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhc------------cCCceEEEEccCCCchhhHH
Confidence 479999999999999999999999999998764 45555444433221 114577889999998754
Q ss_pred --HHH-------hcCCCEEEEcccCCCC------ccC-----------CCCCcccchHHHHHHHHHHHHhC---------
Q 013273 158 --EPA-------LGNASVVICCIGASEK------EVF-----------DITGPYRIDFQATKNLVDAATIA--------- 202 (446)
Q Consensus 158 --~~a-------~~~~D~VI~~Ag~~~~------~~~-----------~~~~~~~vNv~g~~~l~~aa~~~--------- 202 (446)
+++ ++++|+||||||.... +.. ++...+++|+.++..+++++...
T Consensus 70 ~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~ 149 (267)
T TIGR02685 70 RCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQRQAGTRAEQR 149 (267)
T ss_pred HHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHHhhhcccccC
Confidence 333 2578999999995321 111 12345789999999998876432
Q ss_pred -CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecc
Q 013273 203 -KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQ 274 (446)
Q Consensus 203 -~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~ 274 (446)
...++|++||...... ...+..|+.+|+.++.+++ ..|+++++|+||++..+.+... .....+..
T Consensus 150 ~~~~~iv~~~s~~~~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~~~-~~~~~~~~ 222 (267)
T TIGR02685 150 STNLSIVNLCDAMTDQP------LLGFTMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAMPF-EVQEDYRR 222 (267)
T ss_pred CCCeEEEEehhhhccCC------CcccchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCccccch-hHHHHHHH
Confidence 1236888888654221 2345579999999998865 2689999999999976632110 00000111
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
...+......++|+|+++++++.+.. ...++++.+.++.
T Consensus 223 ~~~~~~~~~~~~~va~~~~~l~~~~~~~~~G~~~~v~gg~ 262 (267)
T TIGR02685 223 KVPLGQREASAEQIADVVIFLVSPKAKYITGTCIKVDGGL 262 (267)
T ss_pred hCCCCcCCCCHHHHHHHHHHHhCcccCCcccceEEECCce
Confidence 11111235799999999999997653 2467777776553
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=7.1e-18 Score=167.28 Aligned_cols=213 Identities=15% Similarity=0.084 Sum_probs=147.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..++++++||||+|+||++++++|+++|++|++.+|+. ...+.+.++++.. + .++.++.+|+.|.+
T Consensus 9 ~l~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~---------g----~~~~~~~~Dv~d~~ 75 (306)
T PRK07792 9 DLSGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAA---------G----AKAVAVAGDISQRA 75 (306)
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhc---------C----CeEEEEeCCCCCHH
Confidence 35678999999999999999999999999999998854 3444444444321 2 57889999999988
Q ss_pred cHHHHh------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC-----------CCCEEEEEcc
Q 013273 156 QIEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----------KVNHFIMVSS 212 (446)
Q Consensus 156 ~~~~a~------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~-----------~v~r~V~vSS 212 (446)
++.+++ +++|+||||||.... ...++...+++|+.++.++++++... ..++||++||
T Consensus 76 ~~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~~~~~~~~~~~~g~iv~isS 155 (306)
T PRK07792 76 TADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYWRAKAKAAGGPVYGRIVNTSS 155 (306)
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcccCCCCCcEEEEECC
Confidence 877765 468999999996432 22345566889999999999887421 1258999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCH
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (446)
....... .....|+.+|..++.+.+ .+|+++++|+||. .......... .. .........++++
T Consensus 156 ~~~~~~~------~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~i~Pg~-~t~~~~~~~~-~~--~~~~~~~~~~~~p 225 (306)
T PRK07792 156 EAGLVGP------VGQANYGAAKAGITALTLSAARALGRYGVRANAICPRA-RTAMTADVFG-DA--PDVEAGGIDPLSP 225 (306)
T ss_pred cccccCC------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEECCCC-CCchhhhhcc-cc--chhhhhccCCCCH
Confidence 7653211 223469999999987764 3689999999984 2221100000 00 0000011235789
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+|.++++++.+.. ...|++|.+.++
T Consensus 226 e~va~~v~~L~s~~~~~~tG~~~~v~gg 253 (306)
T PRK07792 226 EHVVPLVQFLASPAAAEVNGQVFIVYGP 253 (306)
T ss_pred HHHHHHHHHHcCccccCCCCCEEEEcCC
Confidence 999999999987643 245777777654
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=99.79 E-value=4e-18 Score=162.18 Aligned_cols=210 Identities=17% Similarity=0.155 Sum_probs=146.6
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
|+||||+|+||+++++.|+++|++|++++|.. ++...+.+.++.. + .++.++.+|++|.+++.+++
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~~~~~~ 67 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQ---------G----GNARLLQFDVADRVACRTLL 67 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---------C----CeEEEEEccCCCHHHHHHHH
Confidence 68999999999999999999999999998764 4444444444322 1 56899999999998887765
Q ss_pred -------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccccCCCCchh
Q 013273 162 -------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 162 -------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+.+|++|||+|.... +..++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 68 ~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~vsS~~~~~~~---- 143 (239)
T TIGR01831 68 EADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIRARQGGRIITLASVSGVMGN---- 143 (239)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcCCeEEEEEcchhhccCC----
Confidence 357999999985421 233455668899999999988762 2455699999997543221
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.....|+.+|...+.+.+ ..|++++.|+||++.++....... ...........+.....+|+|+++.+++
T Consensus 144 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~va~~~~~l~ 220 (239)
T TIGR01831 144 --RGQVNYSAAKAGLIGATKALAVELAKRKITVNCIAPGLIDTEMLAEVEH-DLDEALKTVPMNRMGQPAEVASLAGFLM 220 (239)
T ss_pred --CCCcchHHHHHHHHHHHHHHHHHHhHhCeEEEEEEEccCccccchhhhH-HHHHHHhcCCCCCCCCHHHHHHHHHHHc
Confidence 234569999998876654 368999999999998874321100 0000001112334678999999999999
Q ss_pred hCCC-CCCCcEEEEecC
Q 013273 297 KNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 297 ~~~~-~~~~~v~ni~~~ 312 (446)
.+.. ...+.++.+.++
T Consensus 221 ~~~~~~~~g~~~~~~gg 237 (239)
T TIGR01831 221 SDGASYVTRQVISVNGG 237 (239)
T ss_pred CchhcCccCCEEEecCC
Confidence 8643 345666655543
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=5.5e-18 Score=162.25 Aligned_cols=198 Identities=15% Similarity=0.113 Sum_probs=143.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC--Ch
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE--KR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~--d~ 154 (446)
...+++|+||||+|+||.++++.|++.|++|++++|+.++...+.++++.. ...++.++.+|+. +.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~d~~~~~~ 76 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAA------------GGPQPAIIPLDLLTATP 76 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhc------------CCCCceEEEecccCCCH
Confidence 456789999999999999999999999999999999987776666555432 1146778888886 44
Q ss_pred hcHHHH-------hcCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcccccc
Q 013273 155 VQIEPA-------LGNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN 216 (446)
Q Consensus 155 ~~~~~a-------~~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~ 216 (446)
+++.++ +..+|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||....
T Consensus 77 ~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~~~~~~~iv~~ss~~~~ 156 (247)
T PRK08945 77 QNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLLKSPAASLVFTSSSVGR 156 (247)
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhCCCCEEEEEccHhhc
Confidence 444433 3578999999986321 122345567899999888888774 4577899999997653
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
... ..+..|+.+|+.+|.+++. .|+++++++||++.++..... ... .....+...+|++
T Consensus 157 ~~~------~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~~~~v~pg~v~t~~~~~~------~~~--~~~~~~~~~~~~~ 222 (247)
T PRK08945 157 QGR------ANWGAYAVSKFATEGMMQVLADEYQGTNLRVNCINPGGTRTAMRASA------FPG--EDPQKLKTPEDIM 222 (247)
T ss_pred CCC------CCCcccHHHHHHHHHHHHHHHHHhcccCEEEEEEecCCccCcchhhh------cCc--ccccCCCCHHHHH
Confidence 221 2344699999999987652 579999999999976522100 000 1123468899999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
+.+++++.+..
T Consensus 223 ~~~~~~~~~~~ 233 (247)
T PRK08945 223 PLYLYLMGDDS 233 (247)
T ss_pred HHHHHHhCccc
Confidence 99999986543
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.7e-18 Score=181.88 Aligned_cols=204 Identities=15% Similarity=0.074 Sum_probs=148.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+.++.. | .++.++.+|++|.+++
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~~ 379 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAA---------G----AVAHAYRVDVSDADAM 379 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHHH
Confidence 45679999999999999999999999999999999988777766655432 2 4689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCC-CCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~-v~r~V~vSS~~~~~~~ 219 (446)
+++++ .+|+||||||.... +..++...+++|+.|+.++++++. +.+ .++||++||..+....
T Consensus 380 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~ 459 (582)
T PRK05855 380 EAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYAPS 459 (582)
T ss_pred HHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhccCC
Confidence 87763 58999999996432 223445667899999999988764 333 3599999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee--------ecccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT--------LSQEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~--------~~~~~~~~~~~v~ 284 (446)
.....|+.+|+..+.+.+ ..|+++++|+||.+-++........... ...........+.
T Consensus 460 ------~~~~~Y~~sKaa~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 533 (582)
T PRK05855 460 ------RSLPAYATSKAAVLMLSECLRAELAAAGIGVTAICPGFVDTNIVATTRFAGADAEDEARRRGRADKLYQRRGYG 533 (582)
T ss_pred ------CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCCCcccchhccccCCcccchhhhHHhhhhhhccccCCC
Confidence 335679999999887754 3699999999999977632110000000 0000001112368
Q ss_pred HHHHHHHHHHHHhCCC
Q 013273 285 NLQVAELLACMAKNRS 300 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~ 300 (446)
++|+|+++++++.++.
T Consensus 534 p~~va~~~~~~~~~~~ 549 (582)
T PRK05855 534 PEKVAKAIVDAVKRNK 549 (582)
T ss_pred HHHHHHHHHHHHHcCC
Confidence 9999999999998765
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.78 E-value=7e-18 Score=183.89 Aligned_cols=219 Identities=15% Similarity=0.146 Sum_probs=153.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.+....+.+.+... ....++.++.+|++|.+++
T Consensus 412 l~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~-----------~~~~~~~~v~~Dvtd~~~v 480 (676)
T TIGR02632 412 LARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQ-----------FGAGRAVALKMDVTDEQAV 480 (676)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhh-----------cCCCcEEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999987766655444321 0113578899999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCC-CCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~-v~r~V~vSS~~~~~~~ 219 (446)
.+++. ++|+||||||..... ..++...+++|+.+..++++.+. +.+ .++||++||.......
T Consensus 481 ~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~~a~~~~ 560 (676)
T TIGR02632 481 KAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASKNAVYAG 560 (676)
T ss_pred HHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeChhhcCCC
Confidence 88764 789999999964321 12244557788888877765553 333 3589999997653322
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccccc--------ce------eecccCcc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETH--------NI------TLSQEDTL 278 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~--------~~------~~~~~~~~ 278 (446)
.....|+.+|...+.+++. .|++++.|+||.++.....+.... .+ ........
T Consensus 561 ------~~~~aY~aSKaA~~~l~r~lA~el~~~gIrVn~V~Pg~V~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ 634 (676)
T TIGR02632 561 ------KNASAYSAAKAAEAHLARCLAAEGGTYGIRVNTVNPDAVLQGSGIWDGEWREERAAAYGIPADELEEHYAKRTL 634 (676)
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEECCceecCcccccccchhhhhhcccCChHHHHHHHHhcCC
Confidence 2346799999999988762 589999999999873211110000 00 00011233
Q ss_pred cCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+.+++++|||+++++++.+.. ...|.++++.++.
T Consensus 635 l~r~v~peDVA~av~~L~s~~~~~~TG~~i~vDGG~ 670 (676)
T TIGR02632 635 LKRHIFPADIAEAVFFLASSKSEKTTGCIITVDGGV 670 (676)
T ss_pred cCCCcCHHHHHHHHHHHhCCcccCCcCcEEEECCCc
Confidence 4567999999999999987532 3457888887764
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=7.4e-18 Score=167.69 Aligned_cols=173 Identities=16% Similarity=0.103 Sum_probs=130.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++++||||+|+||+++++.|+++|++|++++|+.++.....+++... ....++.++.+|+.|.++
T Consensus 11 ~l~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~-----------~~~~~v~~~~~Dl~d~~s 79 (313)
T PRK05854 11 DLSGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTA-----------VPDAKLSLRALDLSSLAS 79 (313)
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------CCCCceEEEEecCCCHHH
Confidence 356789999999999999999999999999999999988877766655432 111468999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCC-
Q 013273 157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF- 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~- 220 (446)
+++++ +++|+||||||.... +..+++..+++|+.+...+++.+.. .+..|||++||........
T Consensus 80 v~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~~~riv~vsS~~~~~~~~~ 159 (313)
T PRK05854 80 VAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAGRARVTSQSSIAARRGAIN 159 (313)
T ss_pred HHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhCCCCeEEEechhhcCCCcC
Confidence 88765 458999999996432 2234566789999999888877752 2346999999975422110
Q ss_pred -----chhhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCC
Q 013273 221 -----PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERP 260 (446)
Q Consensus 221 -----~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp 260 (446)
......++..|+.+|...+.+.++ .|++++.+.||++.++
T Consensus 160 ~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 160 WDDLNWERSYAGMRAYSQSKIAVGLFALELDRRSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred cccccccccCcchhhhHHHHHHHHHHHHHHHHHhhcCCCCeEEEEEecceeccC
Confidence 011234567899999988866541 4799999999999765
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.2e-18 Score=165.06 Aligned_cols=209 Identities=16% Similarity=0.115 Sum_probs=145.1
Q ss_pred EEEEECCCcHHHHHHHHHHHH----CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~----~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++||||+|+||++++++|++ .|++|+++.|+.++...+.++++.. ....++.++.+|+.|.+++
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~v~~~~~Dl~~~~~v 70 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLKAEIGAE-----------RSGLRVVRVSLDLGAEAGL 70 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHHHHHHhc-----------CCCceEEEEEeccCCHHHH
Confidence 589999999999999999997 7999999999988877766655431 0114688999999999988
Q ss_pred HHHhcC-----------CCEEEEcccCCCCc---------cCCCCCcccchHHHHHHHHHHHHhC-----C-CCEEEEEc
Q 013273 158 EPALGN-----------ASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATIA-----K-VNHFIMVS 211 (446)
Q Consensus 158 ~~a~~~-----------~D~VI~~Ag~~~~~---------~~~~~~~~~vNv~g~~~l~~aa~~~-----~-v~r~V~vS 211 (446)
+++++. .|+||||||..... ..+++..+++|+.++..+++++... + .++||++|
T Consensus 71 ~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~is 150 (256)
T TIGR01500 71 EQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNIS 150 (256)
T ss_pred HHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEEC
Confidence 876621 26999999953210 1233456889999998887776432 2 35899999
Q ss_pred cccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccc--c-cee-ecccCccc
Q 013273 212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KET--H-NIT-LSQEDTLF 279 (446)
Q Consensus 212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~--~-~~~-~~~~~~~~ 279 (446)
|...... ...+..|+.+|...+.+.+ ..|++++.|+||++.++.... ... . ... ........
T Consensus 151 S~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (256)
T TIGR01500 151 SLCAIQP------FKGWALYCAGKAARDMLFQVLALEEKNPNVRVLNYAPGVLDTDMQQQVREESVDPDMRKGLQELKAK 224 (256)
T ss_pred CHHhCCC------CCCchHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecCCcccchHHHHHHHhcCChhHHHHHHHHHhc
Confidence 9765322 1334579999999988765 268999999999998763210 000 0 000 00011123
Q ss_pred CCccCHHHHHHHHHHHHhCCCCCCCcEE
Q 013273 280 GGQVSNLQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
+.+..++|+|+++++++.+.....|+.+
T Consensus 225 ~~~~~p~eva~~~~~l~~~~~~~~G~~~ 252 (256)
T TIGR01500 225 GKLVDPKVSAQKLLSLLEKDKFKSGAHV 252 (256)
T ss_pred CCCCCHHHHHHHHHHHHhcCCcCCccee
Confidence 4568999999999999975543344444
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=6.5e-18 Score=163.18 Aligned_cols=212 Identities=13% Similarity=0.087 Sum_probs=144.3
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+.+++++|||| +++||+++++.|+++|++|++++|+. +..+.+.+++ + .++.++.+|++|
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~------------~----~~~~~~~~Dv~~ 68 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRL------------P----EPAPVLELDVTN 68 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhc------------C----CCCcEEeCCCCC
Confidence 35679999999 89999999999999999999998864 2222222111 1 357789999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccc
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 214 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~ 214 (446)
.+++++++ +++|++|||||.... +.+++...+++|+.++.++++++... ..+++|++|+.+
T Consensus 69 ~~~i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~g~Iv~is~~~ 148 (256)
T PRK07889 69 EEHLASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLMNEGGSIVGLDFDA 148 (256)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhcccCceEEEEeecc
Confidence 98887765 568999999996421 11223445789999999988887543 225899998654
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccC-CccC
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFG-GQVS 284 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~-~~v~ 284 (446)
.. + ...+..|+.+|+..+.+.+ ..|++++.|.||++.++....... ... .........+ .+..
T Consensus 149 ~~--~-----~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (256)
T PRK07889 149 TV--A-----WPAYDWMGVAKAALESTNRYLARDLGPRGIRVNLVAAGPIRTLAAKAIPGFELLEEGWDERAPLGWDVKD 221 (256)
T ss_pred cc--c-----CCccchhHHHHHHHHHHHHHHHHHhhhcCeEEEeeccCcccChhhhcccCcHHHHHHHHhcCccccccCC
Confidence 21 1 1223458999999887765 378999999999998763211000 000 0000111122 3678
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++|+|+++++++.+.. ...++++.+.++
T Consensus 222 p~evA~~v~~l~s~~~~~~tG~~i~vdgg 250 (256)
T PRK07889 222 PTPVARAVVALLSDWFPATTGEIVHVDGG 250 (256)
T ss_pred HHHHHHHHHHHhCcccccccceEEEEcCc
Confidence 9999999999998643 235677766554
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.5e-17 Score=160.45 Aligned_cols=213 Identities=14% Similarity=0.111 Sum_probs=145.1
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCc-----------hhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSV-----------QRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~-----------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
.++++|+||||+| +||++++++|+++|++|+++.|.. .....+.++++.. | .++
T Consensus 4 l~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g----~~~ 70 (256)
T PRK12859 4 LKNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKN---------G----VKV 70 (256)
T ss_pred cCCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEecccccccccccccHHHHHHHHHHHHhc---------C----CeE
Confidence 4568999999995 899999999999999999876431 1112222222211 1 468
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEE
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHF 207 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~ 207 (446)
.++.+|++|.+++++++ +.+|+||||||.... +..+++..+++|+.+...+.+++ ++.+.++|
T Consensus 71 ~~~~~D~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~i 150 (256)
T PRK12859 71 SSMELDLTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKKSGGRI 150 (256)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCeEE
Confidence 89999999999888776 357999999985422 12234455888999988886555 33445699
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccC
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 280 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~ 280 (446)
|++||...... ...+..|+.+|...+.+.+ ..|++++.|+||++.++........ .. .....++
T Consensus 151 v~isS~~~~~~------~~~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~PG~i~t~~~~~~~~~-~~--~~~~~~~ 221 (256)
T PRK12859 151 INMTSGQFQGP------MVGELAYAATKGAIDALTSSLAAEVAHLGITVNAINPGPTDTGWMTEEIKQ-GL--LPMFPFG 221 (256)
T ss_pred EEEcccccCCC------CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEEccccCCCCCHHHHH-HH--HhcCCCC
Confidence 99999765332 2345679999999987754 3689999999999977632110000 00 0111233
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
....++|+|+++.+++.... ...|+++.+.++
T Consensus 222 ~~~~~~d~a~~~~~l~s~~~~~~~G~~i~~dgg 254 (256)
T PRK12859 222 RIGEPKDAARLIKFLASEEAEWITGQIIHSEGG 254 (256)
T ss_pred CCcCHHHHHHHHHHHhCccccCccCcEEEeCCC
Confidence 45689999999999987643 345677766554
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.3e-18 Score=163.42 Aligned_cols=197 Identities=18% Similarity=0.134 Sum_probs=138.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|++|||||+|+||++++++|+++|++|++++|+..+.. . .. ...++.++.+|+.|.+++++
T Consensus 1 ~~~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~~~--~---~~-------------~~~~~~~~~~D~~~~~~~~~ 62 (243)
T PRK07023 1 AVRAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHPSL--A---AA-------------AGERLAEVELDLSDAAAAAA 62 (243)
T ss_pred CceEEEecCCcchHHHHHHHHHhCCCEEEEEecCcchhh--h---hc-------------cCCeEEEEEeccCCHHHHHH
Confidence 358999999999999999999999999999999865321 0 00 01468899999999988887
Q ss_pred Hhc-----------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC
Q 013273 160 ALG-----------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 160 a~~-----------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~ 217 (446)
++. .+|++|||+|.... +..++...+++|+.++..+.+.+. +.+.++||++||.....
T Consensus 63 ~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~ 142 (243)
T PRK07023 63 WLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAASDAAERRILHISSGAARN 142 (243)
T ss_pred HHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhhccCCCEEEEEeChhhcC
Confidence 431 47999999986432 122345668899999777766554 34567999999976543
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH------hCCCCEEEEecCCccCCCcccccccc---eee---cccCcccCCccCH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHN---ITL---SQEDTLFGGQVSN 285 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~------~~gl~~tivRPg~v~gp~~~~~~~~~---~~~---~~~~~~~~~~v~~ 285 (446)
. ..++..|+.+|..+|.+++ ..|+++++|+||++.++......... ... .......+..+..
T Consensus 143 ~------~~~~~~Y~~sK~a~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (243)
T PRK07023 143 A------YAGWSVYCATKAALDHHARAVALDANRALRIVSLAPGVVDTGMQATIRATDEERFPMRERFRELKASGALSTP 216 (243)
T ss_pred C------CCCchHHHHHHHHHHHHHHHHHhcCCCCcEEEEecCCccccHHHHHHHhcccccchHHHHHHHhhhcCCCCCH
Confidence 2 2345679999999998886 25899999999999765311000000 000 0001112456889
Q ss_pred HHHHHHHHHHHhCCC
Q 013273 286 LQVAELLACMAKNRS 300 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~ 300 (446)
+|+|+.++..+.++.
T Consensus 217 ~~va~~~~~~l~~~~ 231 (243)
T PRK07023 217 EDAARRLIAYLLSDD 231 (243)
T ss_pred HHHHHHHHHHHhccc
Confidence 999998877777665
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.77 E-value=1.7e-17 Score=180.96 Aligned_cols=195 Identities=15% Similarity=0.217 Sum_probs=148.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+|+||+++++.|+++|++|++++|+.+..+.+.+.+... + .++.++.+|+.|.+++
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~~ 435 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAK---------G----GTAHAYTCDLTDSAAV 435 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEecCCCHHHH
Confidence 45789999999999999999999999999999999988777766555431 1 4689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc--------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~--------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||..... ..++...+++|+.++.++++++ ++.+.++||++||.++...
T Consensus 436 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 515 (657)
T PRK07201 436 DHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMRERRFGHVVNVSSIGVQTN 515 (657)
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCC
Confidence 87764 689999999964211 1234556789999998887776 3456679999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
. .....|+.+|...+.+++ ..|+++++|+||++.++..... .. . .....++++++|+.
T Consensus 516 ~------~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~pg~v~T~~~~~~--~~--~-----~~~~~~~~~~~a~~ 580 (657)
T PRK07201 516 A------PRFSAYVASKAALDAFSDVAASETLSDGITFTTIHMPLVRTPMIAPT--KR--Y-----NNVPTISPEEAADM 580 (657)
T ss_pred C------CCcchHHHHHHHHHHHHHHHHHHHHhhCCcEEEEECCcCcccccCcc--cc--c-----cCCCCCCHHHHHHH
Confidence 1 234579999999998765 3689999999999988742110 00 0 01235899999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
++..+.+..
T Consensus 581 i~~~~~~~~ 589 (657)
T PRK07201 581 VVRAIVEKP 589 (657)
T ss_pred HHHHHHhCC
Confidence 999886543
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.6e-17 Score=164.22 Aligned_cols=192 Identities=15% Similarity=0.113 Sum_probs=139.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hhc-
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQ- 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~~- 156 (446)
+++++||||||+||++++++|+++|++|++++|++++.+++.++++.. . ...++.++.+|+.+ .+.
T Consensus 53 g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~---------~--~~~~~~~~~~Dl~~~~~~~~ 121 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSK---------Y--SKTQIKTVVVDFSGDIDEGV 121 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHH---------C--CCcEEEEEEEECCCCcHHHH
Confidence 568999999999999999999999999999999998888776665432 0 11357888899985 232
Q ss_pred --HHHHhcC--CCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC-CC
Q 013273 157 --IEPALGN--ASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK-FG 219 (446)
Q Consensus 157 --~~~a~~~--~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~-~~ 219 (446)
+.+.+++ +|++|||||.... +..+++..+++|+.++.++++++. +.+.++||++||..+.. ..
T Consensus 122 ~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS~a~~~~~~ 201 (320)
T PLN02780 122 KRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKRKKGAIINIGSGAAIVIPS 201 (320)
T ss_pred HHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCCC
Confidence 3334454 5699999996421 112234568899999999888874 45667999999976532 11
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
. .....|+.+|...+.+.+ ..|+++++|+||++.++..... ..... .++++++|+.+
T Consensus 202 ~-----p~~~~Y~aSKaal~~~~~~L~~El~~~gI~V~~v~PG~v~T~~~~~~---------~~~~~--~~~p~~~A~~~ 265 (320)
T PLN02780 202 D-----PLYAVYAATKAYIDQFSRCLYVEYKKSGIDVQCQVPLYVATKMASIR---------RSSFL--VPSSDGYARAA 265 (320)
T ss_pred C-----ccchHHHHHHHHHHHHHHHHHHHHhccCeEEEEEeeCceecCccccc---------CCCCC--CCCHHHHHHHH
Confidence 1 224679999999987764 3689999999999987632100 01111 36899999999
Q ss_pred HHHHhC
Q 013273 293 ACMAKN 298 (446)
Q Consensus 293 ~~ll~~ 298 (446)
+..+..
T Consensus 266 ~~~~~~ 271 (320)
T PLN02780 266 LRWVGY 271 (320)
T ss_pred HHHhCC
Confidence 999864
|
|
| >KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.9e-18 Score=153.21 Aligned_cols=220 Identities=16% Similarity=0.137 Sum_probs=162.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|||||++|.+|++|++.+...|. +-.++.-+. .+||++.++.
T Consensus 1 s~kIlVtGg~GLVGsAi~~vv~~q~~~~e~wvf~~sk---------------------------------d~DLt~~a~t 47 (315)
T KOG1431|consen 1 SKKILVTGGTGLVGSAIVKVVQEQGFDDENWVFIGSK---------------------------------DADLTNLADT 47 (315)
T ss_pred CceEEEecCCchHHHHHHHHHHhcCCCCcceEEeccc---------------------------------cccccchHHH
Confidence 36899999999999999999999885 322222221 2899999999
Q ss_pred HHHhc--CCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC----CCch------
Q 013273 158 EPALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF----GFPA------ 222 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~----~~~~------ 222 (446)
+++|+ ....|||+|+.... ........++.|+....|++..|-++|++++|++.|...... ..++
T Consensus 48 ~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~gv~K~vsclStCIfPdkt~yPIdEtmvh~g 127 (315)
T KOG1431|consen 48 RALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEHGVKKVVSCLSTCIFPDKTSYPIDETMVHNG 127 (315)
T ss_pred HHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHhchhhhhhhcceeecCCCCCCCCCHHHhccC
Confidence 99995 46999999985432 223334557889999999999999999999999888766322 1111
Q ss_pred hhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc--------------------ccceeecccCcc
Q 013273 223 AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE--------------------THNITLSQEDTL 278 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~--------------------~~~~~~~~~~~~ 278 (446)
.+.+...+|...|+.+.-..+ ++|..++.+-|.++|||.|++.. +..+.+.+.+..
T Consensus 128 pphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe~sHVlPali~r~h~ak~~gtd~~~VwGsG~P 207 (315)
T KOG1431|consen 128 PPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPENSHVLPALIHRFHEAKRNGTDELTVWGSGSP 207 (315)
T ss_pred CCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcccccchHHHHHHHHHHHhcCCceEEEecCCCh
Confidence 112334468889987764333 58999999999999999998732 223333444444
Q ss_pred cCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC--CCChhhHHHHHHhccCCCCCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~--~~t~~~i~e~l~~i~~~~~~~ 334 (446)
...|+|.+|+|+++++++.+-. .-+-+++..+. .+++.++++++.++.+-.++.
T Consensus 208 lRqFiys~DLA~l~i~vlr~Y~--~vEpiils~ge~~EVtI~e~aeaV~ea~~F~G~l 263 (315)
T KOG1431|consen 208 LRQFIYSDDLADLFIWVLREYE--GVEPIILSVGESDEVTIREAAEAVVEAVDFTGKL 263 (315)
T ss_pred HHHHhhHhHHHHHHHHHHHhhc--CccceEeccCccceeEHHHHHHHHHHHhCCCceE
Confidence 5578999999999999998754 24456666666 789999999999999887763
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.3e-17 Score=161.65 Aligned_cols=207 Identities=18% Similarity=0.096 Sum_probs=139.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc----------hhHHHHHHHHHHhhhcccccccCCCCCCceEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV 147 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~----------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v 147 (446)
+.+++++||||+++||+++++.|++.|++|++++|+. ++...+.+.++.. + .++.++
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~ 72 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAA---------G----GRGIAV 72 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhc---------C----CceEEE
Confidence 4568999999999999999999999999999999974 2333443333321 1 457889
Q ss_pred EcCCCChhcHHHHh-------cCCCEEEEcc-cCCC-----Cc-----cCCCCCcccchHHHHHHHHHHHHh----CCCC
Q 013273 148 ECDLEKRVQIEPAL-------GNASVVICCI-GASE-----KE-----VFDITGPYRIDFQATKNLVDAATI----AKVN 205 (446)
Q Consensus 148 ~~Dl~d~~~~~~a~-------~~~D~VI~~A-g~~~-----~~-----~~~~~~~~~vNv~g~~~l~~aa~~----~~v~ 205 (446)
.+|+.|.+++++++ +++|++|||| |... .. ..++...+++|+.+...+++++.. .+.+
T Consensus 73 ~~Dv~~~~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~~~g 152 (305)
T PRK08303 73 QVDHLVPEQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRRPGG 152 (305)
T ss_pred EcCCCCHHHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhCCCc
Confidence 99999998888765 4689999999 7421 11 122334567899998888877753 3346
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c-cc-cee-ecc
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E-TH-NIT-LSQ 274 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~-~~-~~~-~~~ 274 (446)
+||++||......... ......|+.+|...+.+.+ ..|++++.|.||++.++..... . .. ... ...
T Consensus 153 ~IV~isS~~~~~~~~~---~~~~~~Y~asKaal~~lt~~La~el~~~gIrVn~v~PG~v~T~~~~~~~~~~~~~~~~~~~ 229 (305)
T PRK08303 153 LVVEITDGTAEYNATH---YRLSVFYDLAKTSVNRLAFSLAHELAPHGATAVALTPGWLRSEMMLDAFGVTEENWRDALA 229 (305)
T ss_pred EEEEECCccccccCcC---CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEecCCccccHHHHHhhccCccchhhhhc
Confidence 9999999643211000 1123469999999887765 3689999999999977631100 0 00 000 000
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.....+....++|+|+++++++.++.
T Consensus 230 ~~p~~~~~~~peevA~~v~fL~s~~~ 255 (305)
T PRK08303 230 KEPHFAISETPRYVGRAVAALAADPD 255 (305)
T ss_pred cccccccCCCHHHHHHHHHHHHcCcc
Confidence 01112334579999999999998763
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.76 E-value=4.8e-17 Score=144.40 Aligned_cols=198 Identities=22% Similarity=0.236 Sum_probs=150.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.||||.+|++|++++.++||+|++++|++++.... +++.+++.|+.|++++.+.
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~---------------------~~~~i~q~Difd~~~~a~~ 59 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR---------------------QGVTILQKDIFDLTSLASD 59 (211)
T ss_pred CeEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc---------------------ccceeecccccChhhhHhh
Confidence 6899999999999999999999999999999999886542 5688999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc----hhhhchhhHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP----AAILNLFWGVLLWKR 236 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~----~~~~~~~~~Y~~sK~ 236 (446)
+.+.|+||...|....+.. .........|++..+.+++.|++.++..+.-.-... +.+..|..-|...+.
T Consensus 60 l~g~DaVIsA~~~~~~~~~------~~~~k~~~~li~~l~~agv~RllVVGGAGSL~id~g~rLvD~p~fP~ey~~~A~~ 133 (211)
T COG2910 60 LAGHDAVISAFGAGASDND------ELHSKSIEALIEALKGAGVPRLLVVGGAGSLEIDEGTRLVDTPDFPAEYKPEALA 133 (211)
T ss_pred hcCCceEEEeccCCCCChh------HHHHHHHHHHHHHHhhcCCeeEEEEcCccceEEcCCceeecCCCCchhHHHHHHH
Confidence 9999999999886532111 123445777888888889999999988765221111 122233334677788
Q ss_pred HHH--HHHHh-CCCCEEEEecCCccCCCcccccccceeecccCccc---C-CccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 237 KAE--EALIA-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF---G-GQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 237 ~~E--~~l~~-~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~---~-~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
.+| +.|+. ..++||.|-|..+|-|+. .+..+.++....+. | .+|+..|.|-+++..++++. ..++.|.+
T Consensus 134 ~ae~L~~Lr~~~~l~WTfvSPaa~f~PGe---rTg~yrlggD~ll~n~~G~SrIS~aDYAiA~lDe~E~~~-h~rqRftv 209 (211)
T COG2910 134 QAEFLDSLRAEKSLDWTFVSPAAFFEPGE---RTGNYRLGGDQLLVNAKGESRISYADYAIAVLDELEKPQ-HIRQRFTV 209 (211)
T ss_pred HHHHHHHHhhccCcceEEeCcHHhcCCcc---ccCceEeccceEEEcCCCceeeeHHHHHHHHHHHHhccc-ccceeeee
Confidence 887 44653 569999999999999963 45555555443332 2 58999999999999999987 55565554
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=9.8e-17 Score=153.98 Aligned_cols=190 Identities=14% Similarity=0.123 Sum_probs=136.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++||||+++||+++++.|+ +|++|++++|+.++.+.+.++++.. + ...+.++.+|+.|.++++++
T Consensus 1 ~~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~---------~---~~~~~~~~~Dv~d~~~v~~~ 67 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQR---------G---ATSVHVLSFDAQDLDTHREL 67 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhc---------c---CCceEEEEcccCCHHHHHHH
Confidence 579999999999999999999 5999999999998887776666432 1 13578999999999888776
Q ss_pred h-------cCCCEEEEcccCCCCcc---C---CCCCcccchHHHHHHHHHHH----HhCC-CCEEEEEccccccCCCCch
Q 013273 161 L-------GNASVVICCIGASEKEV---F---DITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~-------~~~D~VI~~Ag~~~~~~---~---~~~~~~~vNv~g~~~l~~aa----~~~~-v~r~V~vSS~~~~~~~~~~ 222 (446)
+ +++|++|||||...... . +....+.+|+.+..+++.++ .+.+ -++||++||.......
T Consensus 68 ~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~--- 144 (246)
T PRK05599 68 VKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIAGWRAR--- 144 (246)
T ss_pred HHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccccccCC---
Confidence 5 46899999999643211 1 11223567888877665544 3332 3699999997653321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
..+..|+.+|...+.+.+ ..|++++.+.||++.++...... .. ...+.++|+|++++.+
T Consensus 145 ---~~~~~Y~asKaa~~~~~~~la~el~~~~I~v~~v~PG~v~T~~~~~~~---------~~--~~~~~pe~~a~~~~~~ 210 (246)
T PRK05599 145 ---RANYVYGSTKAGLDAFCQGLADSLHGSHVRLIIARPGFVIGSMTTGMK---------PA--PMSVYPRDVAAAVVSA 210 (246)
T ss_pred ---cCCcchhhHHHHHHHHHHHHHHHhcCCCceEEEecCCcccchhhcCCC---------CC--CCCCCHHHHHHHHHHH
Confidence 234579999999887664 36899999999999876321000 00 0125899999999999
Q ss_pred HhCCC
Q 013273 296 AKNRS 300 (446)
Q Consensus 296 l~~~~ 300 (446)
+.+..
T Consensus 211 ~~~~~ 215 (246)
T PRK05599 211 ITSSK 215 (246)
T ss_pred HhcCC
Confidence 98764
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.76 E-value=3.1e-17 Score=157.66 Aligned_cols=183 Identities=15% Similarity=0.059 Sum_probs=130.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++++++||||+|+||+++++.|+++|++|++++|+....... . .. ....++.+|++|.++
T Consensus 11 ~l~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~------~--------~~----~~~~~~~~D~~~~~~ 72 (245)
T PRK12367 11 TWQGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSES------N--------DE----SPNEWIKWECGKEES 72 (245)
T ss_pred hhCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhh------h--------cc----CCCeEEEeeCCCHHH
Confidence 45678999999999999999999999999999999986321110 0 00 123678899999999
Q ss_pred HHHHhcCCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHhC-------CCCEEEEEccccccCCCCchhhhc
Q 013273 157 IEPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~~-------~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
+.+.++++|++|||||.... +..++...+++|+.++.++++++... +.+.++..||.+.... .
T Consensus 73 ~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~g~~iiv~ss~a~~~~-------~ 145 (245)
T PRK12367 73 LDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDIALNNNSQIPKEIWVNTSEAEIQP-------A 145 (245)
T ss_pred HHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccCCCeEEEEEecccccCC-------C
Confidence 99999999999999996422 23345667899999999999987542 1223444444432111 1
Q ss_pred hhhHHHHHHHHHHHHH----------HhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 227 LFWGVLLWKRKAEEAL----------IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l----------~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
....|+.+|+..+.+. ...++.++.+.||.+.++.. . ...++++|+|+.++.++
T Consensus 146 ~~~~Y~aSKaal~~~~~l~~~l~~e~~~~~i~v~~~~pg~~~t~~~-----------~-----~~~~~~~~vA~~i~~~~ 209 (245)
T PRK12367 146 LSPSYEISKRLIGQLVSLKKNLLDKNERKKLIIRKLILGPFRSELN-----------P-----IGIMSADFVAKQILDQA 209 (245)
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhhcccccEEEEecCCCcccccC-----------c-----cCCCCHHHHHHHHHHHH
Confidence 2346999999875322 13688899999998754421 0 12478999999999999
Q ss_pred hCCC
Q 013273 297 KNRS 300 (446)
Q Consensus 297 ~~~~ 300 (446)
.+..
T Consensus 210 ~~~~ 213 (245)
T PRK12367 210 NLGL 213 (245)
T ss_pred hcCC
Confidence 8765
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.76 E-value=1.4e-17 Score=148.84 Aligned_cols=216 Identities=19% Similarity=0.160 Sum_probs=154.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.+.++||||+.+||++++..|++.|++|.+.+++...+++....+. .+.+-..+.||+.+..++
T Consensus 12 ~~sk~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~--------------g~~~h~aF~~DVS~a~~v 77 (256)
T KOG1200|consen 12 LMSKVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLG--------------GYGDHSAFSCDVSKAHDV 77 (256)
T ss_pred HhcceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcC--------------CCCccceeeeccCcHHHH
Confidence 456789999999999999999999999999999998876666544321 114566778999998877
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC------CCCEEEEEccccccCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~------~v~r~V~vSS~~~~~~ 218 (446)
+..+ +..++||||||.+.. ..++|+..+.+|+.|+..+.+++.+. ...+||++||+-....
T Consensus 78 ~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~~~~sIiNvsSIVGkiG 157 (256)
T KOG1200|consen 78 QNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQQGLSIINVSSIVGKIG 157 (256)
T ss_pred HHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcCCCceEEeehhhhcccc
Confidence 7654 567999999998643 45678888999999999998888643 2238999999744222
Q ss_pred CCchhhhchhhHHHHHHHH-------HHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRK-------AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~-------~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
. ...+.|+++|.- +.+.+...++++++|.||++-.|.........+.-.......+..-..+|||++
T Consensus 158 N------~GQtnYAAsK~GvIgftktaArEla~knIrvN~VlPGFI~tpMT~~mp~~v~~ki~~~iPmgr~G~~EevA~~ 231 (256)
T KOG1200|consen 158 N------FGQTNYAASKGGVIGFTKTAARELARKNIRVNVVLPGFIATPMTEAMPPKVLDKILGMIPMGRLGEAEEVANL 231 (256)
T ss_pred c------ccchhhhhhcCceeeeeHHHHHHHhhcCceEeEeccccccChhhhhcCHHHHHHHHccCCccccCCHHHHHHH
Confidence 1 234568888752 334455689999999999998884321111111001122234456789999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ..-+..+++.++-
T Consensus 232 V~fLAS~~ssYiTG~t~evtGGl 254 (256)
T KOG1200|consen 232 VLFLASDASSYITGTTLEVTGGL 254 (256)
T ss_pred HHHHhccccccccceeEEEeccc
Confidence 999996543 2357788888763
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.75 E-value=6.2e-17 Score=152.65 Aligned_cols=194 Identities=13% Similarity=0.066 Sum_probs=141.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++++||||+|+||+++++.|+++|++|++++|+.+..+.+.. .+++++.+|++|.+++++
T Consensus 1 ~~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~~~~~v~~ 61 (222)
T PRK06953 1 MKTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQA-------------------LGAEALALDVADPASVAG 61 (222)
T ss_pred CceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHHh-------------------ccceEEEecCCCHHHHHH
Confidence 3689999999999999999999999999999999766544321 235789999999998887
Q ss_pred Hh---c--CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchh
Q 013273 160 AL---G--NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 160 a~---~--~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++ . ++|+||||+|.... ...+++..+++|+.++.++++++.+. ..++||++||........+
T Consensus 62 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~~~-- 139 (222)
T PRK06953 62 LAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVEAAGGVLAVLSSRMGSIGDAT-- 139 (222)
T ss_pred HHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhhccCCeEEEEcCccccccccc--
Confidence 64 2 48999999986421 22335667899999999999988642 2358999998654222111
Q ss_pred hhchhhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
..+.+.|+.+|...+.+++. .+++++.|+||++..+... ..+.+..++.+..++.++..
T Consensus 140 -~~~~~~Y~~sK~a~~~~~~~~~~~~~~i~v~~v~Pg~i~t~~~~---------------~~~~~~~~~~~~~~~~~~~~ 203 (222)
T PRK06953 140 -GTTGWLYRASKAALNDALRAASLQARHATCIALHPGWVRTDMGG---------------AQAALDPAQSVAGMRRVIAQ 203 (222)
T ss_pred -CCCccccHHhHHHHHHHHHHHhhhccCcEEEEECCCeeecCCCC---------------CCCCCCHHHHHHHHHHHHHh
Confidence 11223699999999988763 4789999999999876310 12357889999999998765
Q ss_pred CCC-CCCcEEEEe
Q 013273 299 RSL-SYCKVVEVI 310 (446)
Q Consensus 299 ~~~-~~~~v~ni~ 310 (446)
... ..+..|...
T Consensus 204 ~~~~~~~~~~~~~ 216 (222)
T PRK06953 204 ATRRDNGRFFQYD 216 (222)
T ss_pred cCcccCceEEeeC
Confidence 432 244445443
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.75 E-value=4.4e-17 Score=172.93 Aligned_cols=210 Identities=17% Similarity=0.158 Sum_probs=148.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++++||||+++||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.++++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~~~ 67 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSL------------G----PDHHALAMDVSDEAQIR 67 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CceeEEEeccCCHHHHH
Confidence 4679999999999999999999999999999999987766544322 1 45788999999998887
Q ss_pred HHh-------cCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHHHhC----CCC-EEEEEccccccCC
Q 013273 159 PAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAATIA----KVN-HFIMVSSLGTNKF 218 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~-r~V~vSS~~~~~~ 218 (446)
+++ +++|+||||||... .+..++...+++|+.++.++++++... +.+ +||++||......
T Consensus 68 ~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~~~~~~ 147 (520)
T PRK06484 68 EGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASGAGLVA 147 (520)
T ss_pred HHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCcccCCC
Confidence 766 46899999998631 122335667889999999998888543 333 9999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceee--cccCcccCCccCHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITL--SQEDTLFGGQVSNLQV 288 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~--~~~~~~~~~~v~~~Dv 288 (446)
. .....|+.+|+..+.+.+ ..|+++++|+||.+.++........ .... .......+....++|+
T Consensus 148 ~------~~~~~Y~asKaal~~l~~~la~e~~~~~i~v~~i~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (520)
T PRK06484 148 L------PKRTAYSASKAAVISLTRSLACEWAAKGIRVNAVLPGYVRTQMVAELERAGKLDPSAVRSRIPLGRLGRPEEI 221 (520)
T ss_pred C------CCCchHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCcCchhhhhhcccchhhhHHHHhcCCCCCCcCHHHH
Confidence 2 234579999999988765 3689999999999977642111000 0000 0001112345689999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEe
Q 013273 289 AELLACMAKNRS-LSYCKVVEVI 310 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~ 310 (446)
|+++++++.+.. ...++++.+.
T Consensus 222 a~~v~~l~~~~~~~~~G~~~~~~ 244 (520)
T PRK06484 222 AEAVFFLASDQASYITGSTLVVD 244 (520)
T ss_pred HHHHHHHhCccccCccCceEEec
Confidence 999999987532 2234444443
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.75 E-value=3e-17 Score=163.43 Aligned_cols=208 Identities=14% Similarity=0.110 Sum_probs=141.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++++||||+++||+++++.|+++| ++|++++|+.++...+.+.+.. ...++.++.+|++|.++++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~~~~~v~ 69 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGM-------------PKDSYTIMHLDLGSLDSVR 69 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEcCCCCHHHHH
Confidence 5689999999999999999999999 9999999998777665544321 1146888999999998887
Q ss_pred HHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CC--CCEEEEEccccccCC
Q 013273 159 PAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNKF 218 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v~r~V~vSS~~~~~~ 218 (446)
+++ +++|++|||||.... +..+++..+++|+.++..+++++.. .+ .+|||++||......
T Consensus 70 ~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~~ 149 (314)
T TIGR01289 70 QFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNTN 149 (314)
T ss_pred HHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCccccc
Confidence 665 468999999996321 1223455688999999888777643 32 369999999765321
Q ss_pred C-----C-----c-----------------hhhhchhhHHHHHHHHHHHHHH----h----CCCCEEEEecCCcc-CCCc
Q 013273 219 G-----F-----P-----------------AAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPTD 262 (446)
Q Consensus 219 ~-----~-----~-----------------~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tivRPg~v~-gp~~ 262 (446)
. . . .....++..|+.+|++...+.+ + .|+.++.|+||+|. ++..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~T~l~ 229 (314)
T TIGR01289 150 TLAGNVPPKANLGDLSGLAAGFKAPIAMIDGKEFKGAKAYKDSKVCNMLTVRELHRRFHDETGITFASLYPGCIADTGLF 229 (314)
T ss_pred cCCCcCCCcccccccccccccCCCcccccCCCCcchhhhHHHhHHHHHHHHHHHHHHhccCCCeEEEEecCCcccCCccc
Confidence 0 0 0 0112456679999998655432 1 47999999999995 3321
Q ss_pred cc-ccccceeec-ccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 263 AY-KETHNITLS-QEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 263 ~~-~~~~~~~~~-~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.. ......... ......+++.++++.|+.++.++.+..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~l~~~~~~~~ 269 (314)
T TIGR01289 230 REHVPLFRTLFPPFQKYITKGYVSEEEAGERLAQVVSDPK 269 (314)
T ss_pred ccccHHHHHHHHHHHHHHhccccchhhhhhhhHHhhcCcc
Confidence 10 000000000 001112346889999999999888654
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=5e-17 Score=150.69 Aligned_cols=181 Identities=18% Similarity=0.122 Sum_probs=135.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++||||+|+||+++++.|+++ ++|++++|+.. .+.+|++|.++++++
T Consensus 1 ~~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~------------------------------~~~~D~~~~~~~~~~ 49 (199)
T PRK07578 1 MKILVIGASGTIGRAVVAELSKR-HEVITAGRSSG------------------------------DVQVDITDPASIRAL 49 (199)
T ss_pred CeEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC------------------------------ceEecCCChHHHHHH
Confidence 47999999999999999999999 99999998742 256899999998887
Q ss_pred hc---CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhchhh
Q 013273 161 LG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFW 229 (446)
Q Consensus 161 ~~---~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~~ 229 (446)
++ ++|+||||||.... ...++...+++|+.++.++++++... +.++||++||....... ..+.
T Consensus 50 ~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~iss~~~~~~~------~~~~ 123 (199)
T PRK07578 50 FEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFTLTSGILSDEPI------PGGA 123 (199)
T ss_pred HHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcccccCCCC------CCch
Confidence 74 68999999996432 22234555788999999999988653 33589999987653221 2345
Q ss_pred HHHHHHHHHHHHHH------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCC
Q 013273 230 GVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~ 303 (446)
.|+.+|...+.+.+ ..|++++.|+||++-.+...... .. ....+++++|+|+++..++.+. ..
T Consensus 124 ~Y~~sK~a~~~~~~~la~e~~~gi~v~~i~Pg~v~t~~~~~~~----~~-----~~~~~~~~~~~a~~~~~~~~~~--~~ 192 (199)
T PRK07578 124 SAATVNGALEGFVKAAALELPRGIRINVVSPTVLTESLEKYGP----FF-----PGFEPVPAARVALAYVRSVEGA--QT 192 (199)
T ss_pred HHHHHHHHHHHHHHHHHHHccCCeEEEEEcCCcccCchhhhhh----cC-----CCCCCCCHHHHHHHHHHHhccc--ee
Confidence 79999999887765 36899999999999765321110 00 0124689999999999999754 45
Q ss_pred CcEEEE
Q 013273 304 CKVVEV 309 (446)
Q Consensus 304 ~~v~ni 309 (446)
+++|++
T Consensus 193 g~~~~~ 198 (199)
T PRK07578 193 GEVYKV 198 (199)
T ss_pred eEEecc
Confidence 677765
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.74 E-value=7.8e-17 Score=168.14 Aligned_cols=214 Identities=17% Similarity=0.093 Sum_probs=146.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+.+++.|+++|++|++++|.... +.+.+..+. -+..++.+|++|.+++
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~-~~l~~~~~~---------------~~~~~~~~Dv~~~~~~ 271 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAG-EALAAVANR---------------VGGTALALDITAPDAP 271 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEeCCCHHHH
Confidence 457899999999999999999999999999999985422 112111111 1245788999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC----CCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK----VNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~----v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..++...+++|+.++.++.+++.... .++||++||.......
T Consensus 272 ~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~g~iv~~SS~~~~~g~- 350 (450)
T PRK08261 272 ARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGALGDGGRIVGVSSISGIAGN- 350 (450)
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhhcCCCEEEEECChhhcCCC-
Confidence 7765 368999999996432 223345568899999999999997642 3699999997653221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+++ ..|+++++|+||.+..+.........................+|+|++++
T Consensus 351 -----~~~~~Y~asKaal~~~~~~la~el~~~gi~v~~v~PG~i~t~~~~~~~~~~~~~~~~~~~l~~~~~p~dva~~~~ 425 (450)
T PRK08261 351 -----RGQTNYAASKAGVIGLVQALAPLLAERGITINAVAPGFIETQMTAAIPFATREAGRRMNSLQQGGLPVDVAETIA 425 (450)
T ss_pred -----CCChHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeCcCcchhhhccchhHHHHHhhcCCcCCCCCHHHHHHHHH
Confidence 234579999997776654 36899999999998754211100000000000111223356889999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.... ...++++++.++.
T Consensus 426 ~l~s~~~~~itG~~i~v~g~~ 446 (450)
T PRK08261 426 WLASPASGGVTGNVVRVCGQS 446 (450)
T ss_pred HHhChhhcCCCCCEEEECCCc
Confidence 9987543 2457888887664
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.4e-16 Score=153.26 Aligned_cols=222 Identities=19% Similarity=0.142 Sum_probs=159.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++++||||+.+||++++++|++.|++|++.+|+.+......+.+..... ..+++..+.+|+.+.++
T Consensus 5 ~l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~----------~~~~~~~~~~Dv~~~~~ 74 (270)
T KOG0725|consen 5 RLAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGY----------TGGKVLAIVCDVSKEVD 74 (270)
T ss_pred cCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC----------CCCeeEEEECcCCCHHH
Confidence 46789999999999999999999999999999999999988877666554311 13679999999998876
Q ss_pred HHHHh--------cCCCEEEEcccCCC-------CccCCCCCcccchHHH-HHHHHHHHH----hCCCCEEEEEcccccc
Q 013273 157 IEPAL--------GNASVVICCIGASE-------KEVFDITGPYRIDFQA-TKNLVDAAT----IAKVNHFIMVSSLGTN 216 (446)
Q Consensus 157 ~~~a~--------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g-~~~l~~aa~----~~~v~r~V~vSS~~~~ 216 (446)
+++++ +++|++|||||... .+.++|+..+++|+.| ...+..++. +.+...++++||.+..
T Consensus 75 ~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~~~gg~I~~~ss~~~~ 154 (270)
T KOG0725|consen 75 VEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKKSKGGSIVNISSVAGV 154 (270)
T ss_pred HHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHhcCCceEEEEeccccc
Confidence 66554 56999999999643 2344567778999995 566665553 3356689999997664
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----cce-e--ecccCcccCCc
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----HNI-T--LSQEDTLFGGQ 282 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----~~~-~--~~~~~~~~~~~ 282 (446)
..... ....|+.+|...+++.| .+|++++.|-||.+.++....... ... . ........+..
T Consensus 155 ~~~~~-----~~~~Y~~sK~al~~ltr~lA~El~~~gIRvN~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~p~gr~ 229 (270)
T KOG0725|consen 155 GPGPG-----SGVAYGVSKAALLQLTRSLAKELAKHGIRVNSVSPGLVKTSLRAAGLDDGEMEEFKEATDSKGAVPLGRV 229 (270)
T ss_pred cCCCC-----CcccchhHHHHHHHHHHHHHHHHhhcCcEEEEeecCcEeCCccccccccchhhHHhhhhccccccccCCc
Confidence 33211 11469999999998876 379999999999998874110000 000 0 01122335667
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
..++|+|..+.+++.++. ...|+.+-+.++.
T Consensus 230 g~~~eva~~~~fla~~~asyitG~~i~vdgG~ 261 (270)
T KOG0725|consen 230 GTPEEVAEAAAFLASDDASYITGQTIIVDGGF 261 (270)
T ss_pred cCHHHHHHhHHhhcCcccccccCCEEEEeCCE
Confidence 899999999999998754 2345666555543
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.8e-16 Score=149.79 Aligned_cols=185 Identities=16% Similarity=0.087 Sum_probs=135.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|+||||+|+||+++++.|+++|++|++++|++.....+.+ . .++.++.+|+.|.+++++
T Consensus 1 ~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~----~--------------~~~~~~~~D~~d~~~~~~ 62 (225)
T PRK08177 1 KRTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQA----L--------------PGVHIEKLDMNDPASLDQ 62 (225)
T ss_pred CCEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHHh----c--------------cccceEEcCCCCHHHHHH
Confidence 3689999999999999999999999999999999876544321 1 457788999999988887
Q ss_pred Hhc-----CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchh
Q 013273 160 ALG-----NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 160 a~~-----~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++ ++|+||||||.... +..++...+.+|+.++.++++++... +..+++++||........
T Consensus 63 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~ss~~g~~~~~--- 139 (225)
T PRK08177 63 LLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVRPGQGVLAFMSSQLGSVELP--- 139 (225)
T ss_pred HHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhhhcCCEEEEEccCccccccC---
Confidence 764 58999999986421 12234556788999999998888543 335899998854322111
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
....+..|+.+|...+.+++ ..|++++.|+||++-++... . ...+.....+.-++..+
T Consensus 140 ~~~~~~~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~i~PG~i~t~~~~-----------~----~~~~~~~~~~~~~~~~~ 204 (225)
T PRK08177 140 DGGEMPLYKASKAALNSMTRSFVAELGEPTLTVLSMHPGWVKTDMGG-----------D----NAPLDVETSVKGLVEQI 204 (225)
T ss_pred CCCCccchHHHHHHHHHHHHHHHHHhhcCCeEEEEEcCCceecCCCC-----------C----CCCCCHHHHHHHHHHHH
Confidence 11234469999999998876 26799999999999876310 0 11356677777777777
Q ss_pred hCCC
Q 013273 297 KNRS 300 (446)
Q Consensus 297 ~~~~ 300 (446)
++..
T Consensus 205 ~~~~ 208 (225)
T PRK08177 205 EAAS 208 (225)
T ss_pred HhCC
Confidence 6654
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.9e-16 Score=156.55 Aligned_cols=228 Identities=11% Similarity=0.066 Sum_probs=148.4
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC--CC
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EK 153 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d 153 (446)
+.+|++||||| +.+||+++++.|++.|++|++ .|+.++++.+...+...+++......+.........+.+|+ .+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~ 85 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITKVYPLDAVFDT 85 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCeeeecceecCc
Confidence 67889999999 899999999999999999988 78887777766555432111000000000011246788898 33
Q ss_pred hh------------------cHHHHh-------cCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHHH
Q 013273 154 RV------------------QIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAAT 200 (446)
Q Consensus 154 ~~------------------~~~~a~-------~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa~ 200 (446)
.+ ++++++ +++|+||||||... .+..++...+++|+.++..+++++.
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~ 165 (303)
T PLN02730 86 PEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFG 165 (303)
T ss_pred cccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 33 455443 56899999997421 2334566778999999999998886
Q ss_pred hC--CCCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCccccc-cc
Q 013273 201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE-TH 268 (446)
Q Consensus 201 ~~--~v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~-~~ 268 (446)
.. .-+++|++||....... ... ..|+.+|+..+.+.+ . .|++++.|.||++.++...... ..
T Consensus 166 p~m~~~G~II~isS~a~~~~~------p~~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~~~~~~~~~~ 239 (303)
T PLN02730 166 PIMNPGGASISLTYIASERII------PGYGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSRAAKAIGFID 239 (303)
T ss_pred HHHhcCCEEEEEechhhcCCC------CCCchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCchhhcccccH
Confidence 43 12699999997653321 112 369999999988765 2 4899999999999876321100 00
Q ss_pred ce-eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 269 NI-TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 269 ~~-~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.. .........+.+..++|+|.++++++.+.. ...++++.+-++
T Consensus 240 ~~~~~~~~~~pl~r~~~peevA~~~~fLaS~~a~~itG~~l~vdGG 285 (303)
T PLN02730 240 DMIEYSYANAPLQKELTADEVGNAAAFLASPLASAITGATIYVDNG 285 (303)
T ss_pred HHHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCccCCEEEECCC
Confidence 00 000011112345789999999999997543 245666766544
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.9e-16 Score=149.02 Aligned_cols=198 Identities=14% Similarity=0.096 Sum_probs=137.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|+||||+|+||++++++|+++| +.|++..|+.... ....++.++++|++|.++++
T Consensus 1 ~~vlItGas~gIG~~ia~~l~~~~~~~~v~~~~~~~~~~---------------------~~~~~~~~~~~Dls~~~~~~ 59 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLLERYPDATVHATYRHHKPD---------------------FQHDNVQWHALDVTDEAEIK 59 (235)
T ss_pred CEEEEECCCChHHHHHHHHHHHhCCCCEEEEEccCCccc---------------------cccCceEEEEecCCCHHHHH
Confidence 579999999999999999999985 5666666654321 01157889999999988876
Q ss_pred HH---hcCCCEEEEcccCCCCcc------------CCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 159 PA---LGNASVVICCIGASEKEV------------FDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 159 ~a---~~~~D~VI~~Ag~~~~~~------------~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++ ++++|+||||||...... ..+...+++|+.+...+++.+.. .+.++++++||.......
T Consensus 60 ~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~~~i~~iss~~~~~~~ 139 (235)
T PRK09009 60 QLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQSESAKFAVISAKVGSISD 139 (235)
T ss_pred HHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhccccCCceEEEEeeccccccc
Confidence 64 467899999999653211 11234577899999888887754 345689999885331111
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
. ...++..|+.+|+.++.+++. .+++++.|.||++.++..... . .....+.+++.+|+|+
T Consensus 140 ~---~~~~~~~Y~asK~a~~~~~~~la~e~~~~~~~i~v~~v~PG~v~t~~~~~~-------~-~~~~~~~~~~~~~~a~ 208 (235)
T PRK09009 140 N---RLGGWYSYRASKAALNMFLKTLSIEWQRSLKHGVVLALHPGTTDTALSKPF-------Q-QNVPKGKLFTPEYVAQ 208 (235)
T ss_pred C---CCCCcchhhhhHHHHHHHHHHHHHHhhcccCCeEEEEEcccceecCCCcch-------h-hccccCCCCCHHHHHH
Confidence 1 123455799999999987651 478999999999987742110 0 1112344689999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEe
Q 013273 291 LLACMAKNRS-LSYCKVVEVI 310 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~ 310 (446)
+++.++.... ...+..+.+.
T Consensus 209 ~~~~l~~~~~~~~~g~~~~~~ 229 (235)
T PRK09009 209 CLLGIIANATPAQSGSFLAYD 229 (235)
T ss_pred HHHHHHHcCChhhCCcEEeeC
Confidence 9999998764 2245555443
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-16 Score=148.37 Aligned_cols=241 Identities=15% Similarity=0.017 Sum_probs=176.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++||||-||+-|.+|++.|++.|++|+.+.|..+....-.-.+..+ +.....++.++.+||+|...+.+
T Consensus 2 ~K~ALITGITGQDGsYLa~lLLekGY~VhGi~Rrss~~n~~ri~L~~~---------~~~~~~~l~l~~gDLtD~~~l~r 72 (345)
T COG1089 2 GKVALITGITGQDGSYLAELLLEKGYEVHGIKRRSSSFNTPRIHLYED---------PHLNDPRLHLHYGDLTDSSNLLR 72 (345)
T ss_pred CceEEEecccCCchHHHHHHHHhcCcEEEEEeeccccCCcccceeccc---------cccCCceeEEEeccccchHHHHH
Confidence 578999999999999999999999999999999743221100011111 22334679999999999999999
Q ss_pred HhcC--CCEEEEcccCC--CCccCCCCCcccchHHHHHHHHHHHHhCCC--CEEEEEcccccc-----CCCCchhhhchh
Q 013273 160 ALGN--ASVVICCIGAS--EKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSSLGTN-----KFGFPAAILNLF 228 (446)
Q Consensus 160 a~~~--~D~VI~~Ag~~--~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v--~r~V~vSS~~~~-----~~~~~~~~~~~~ 228 (446)
+++. .|-|+|+|+.+ ..+...++...+++..|+.+|+++.+-.+. -||...||.-.. .+-.+..+..|.
T Consensus 73 ~l~~v~PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~~~~~~rfYQAStSE~fG~v~~~pq~E~TPFyPr 152 (345)
T COG1089 73 ILEEVQPDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRILGEKKTRFYQASTSELYGLVQEIPQKETTPFYPR 152 (345)
T ss_pred HHHhcCchhheeccccccccccccCcceeeeechhHHHHHHHHHHHhCCcccEEEecccHHhhcCcccCccccCCCCCCC
Confidence 9965 59999999853 456677888899999999999999987653 388888885331 122444667888
Q ss_pred hHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcc--c--------------ccccceeecccCcccCCccCHHHH
Q 013273 229 WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDA--Y--------------KETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~--~--------------~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
++|+.+|.-+-.+.. .+|+-.+.=...+-.+|... | +....+.++ .......|-|..|.
T Consensus 153 SPYAvAKlYa~W~tvNYResYgl~AcnGILFNHESP~Rge~FVTRKIt~ava~Ik~G~q~~l~lG-NldAkRDWG~A~DY 231 (345)
T COG1089 153 SPYAVAKLYAYWITVNYRESYGLFACNGILFNHESPLRGETFVTRKITRAVARIKLGLQDKLYLG-NLDAKRDWGHAKDY 231 (345)
T ss_pred CHHHHHHHHHHheeeehHhhcCceeecceeecCCCCCCccceehHHHHHHHHHHHccccceEEec-cccccccccchHHH
Confidence 999999999988765 36765544333344445321 1 111111121 22335579999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.++++.+|+.+. ...|.|..+...+..+++++..+..|....
T Consensus 232 Ve~mwlmLQq~~---PddyViATg~t~sVrefv~~Af~~~g~~l~ 273 (345)
T COG1089 232 VEAMWLMLQQEE---PDDYVIATGETHSVREFVELAFEMVGIDLE 273 (345)
T ss_pred HHHHHHHHccCC---CCceEEecCceeeHHHHHHHHHHHcCceEE
Confidence 999999999876 678999999999999999999999986543
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.71 E-value=5.2e-16 Score=148.58 Aligned_cols=196 Identities=15% Similarity=0.110 Sum_probs=148.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++||||||+++||+.++.+++++|.++++.+.+.+...+..+.+++. +++....||++|.++
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~--------------g~~~~y~cdis~~ee 100 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKI--------------GEAKAYTCDISDREE 100 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhc--------------CceeEEEecCCCHHH
Confidence 456789999999999999999999999999999999998888877777653 479999999999887
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+.+.. +.+|++|||||.... +.++.+..+++|+.+....+++.. +.+-+|+|.++|..+...
T Consensus 101 i~~~a~~Vk~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~~~GHIV~IaS~aG~~g- 179 (300)
T KOG1201|consen 101 IYRLAKKVKKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLENNNGHIVTIASVAGLFG- 179 (300)
T ss_pred HHHHHHHHHHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhcCCceEEEehhhhcccC-
Confidence 76654 678999999996421 233345668999999888777764 456679999999765322
Q ss_pred CchhhhchhhHHHHHHHHHHHHH-------Hh---CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEAL-------IA---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l-------~~---~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
......|..||.++..+. ++ .|++.|.++|+.+-... +.. ......+...+..+.||
T Consensus 180 -----~~gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~Tgm--f~~------~~~~~~l~P~L~p~~va 246 (300)
T KOG1201|consen 180 -----PAGLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFINTGM--FDG------ATPFPTLAPLLEPEYVA 246 (300)
T ss_pred -----CccchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeeccccc--cCC------CCCCccccCCCCHHHHH
Confidence 123446999999876443 22 57999999998886321 110 11222234678999999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
+-|+..+....
T Consensus 247 ~~Iv~ai~~n~ 257 (300)
T KOG1201|consen 247 KRIVEAILTNQ 257 (300)
T ss_pred HHHHHHHHcCC
Confidence 99999988765
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=99.71 E-value=2e-16 Score=157.03 Aligned_cols=204 Identities=16% Similarity=0.167 Sum_probs=137.5
Q ss_pred EEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh-
Q 013273 84 FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL- 161 (446)
Q Consensus 84 lVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~- 161 (446)
+||||+++||++++++|+++| ++|++.+|+.++...+.++++. ...++.++.+|+.|.+++++++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~-------------~~~~~~~~~~Dl~d~~~v~~~~~ 67 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGM-------------PKDSYTVMHLDLASLDSVRQFVD 67 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcC-------------CCCeEEEEEecCCCHHHHHHHHH
Confidence 699999999999999999999 9999999998776655443321 1146888999999999887765
Q ss_pred ------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCC--CCEEEEEccccccCC---C
Q 013273 162 ------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNKF---G 219 (446)
Q Consensus 162 ------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~--v~r~V~vSS~~~~~~---~ 219 (446)
+++|+||||||.... +..+++..+++|+.|+.++++++. +.+ .++||++||...... +
T Consensus 68 ~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~~~~~~~ 147 (308)
T PLN00015 68 NFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGNTNTLAG 147 (308)
T ss_pred HHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccc
Confidence 358999999996421 122345668899999888877764 333 469999999754211 0
Q ss_pred --Cc----h--------------------hhhchhhHHHHHHHHHHHHHH----h----CCCCEEEEecCCcc-CCCccc
Q 013273 220 --FP----A--------------------AILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGME-RPTDAY 264 (446)
Q Consensus 220 --~~----~--------------------~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tivRPg~v~-gp~~~~ 264 (446)
.+ . .....+..|+.+|.+.+.+.+ + .|+.++.|+||+|. .+....
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~SK~a~~~~~~~la~~~~~~~gi~v~~v~PG~v~~t~~~~~ 227 (308)
T PLN00015 148 NVPPKANLGDLRGLAGGLNGLNSSAMIDGGEFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFRE 227 (308)
T ss_pred cCCCccchhhhhhhhcccCCccchhhccccCCcHHHHHhHhHHHHHHHHHHHHHhhcccCCeEEEEecCCcccCcccccc
Confidence 00 0 012356779999998554432 2 48999999999995 332110
Q ss_pred cc-ccceeec-ccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 265 KE-THNITLS-QEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 265 ~~-~~~~~~~-~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.. ....... ......+.+..+++.|+.+++++.+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~pe~~a~~~~~l~~~~~ 265 (308)
T PLN00015 228 HIPLFRLLFPPFQKYITKGYVSEEEAGKRLAQVVSDPS 265 (308)
T ss_pred ccHHHHHHHHHHHHHHhcccccHHHhhhhhhhhccccc
Confidence 00 0000000 001112346789999999999887654
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.70 E-value=3.2e-16 Score=148.79 Aligned_cols=187 Identities=8% Similarity=-0.033 Sum_probs=134.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++++||||+++||+++++.|+++|++|+++.|+.++.+.+.++++.. + .++..+.+|+.|.+++
T Consensus 3 ~~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~---------~----~~~~~~~~D~~~~~~~ 69 (227)
T PRK08862 3 IKSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSAL---------T----DNVYSFQLKDFSQESI 69 (227)
T ss_pred CCCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---------C----CCeEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988877766655432 1 4577889999999988
Q ss_pred HHHh-------c-CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCC-CCEEEEEccccccC
Q 013273 158 EPAL-------G-NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAK-VNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~-------~-~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~-v~r~V~vSS~~~~~ 217 (446)
++++ + ++|++|||||.... +..++...+++|+.+...+++.+. +.+ .++||++||....
T Consensus 70 ~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~- 148 (227)
T PRK08862 70 RHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVISHDDH- 148 (227)
T ss_pred HHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEecCCCC-
Confidence 7765 4 78999999974211 112233346677777777665553 332 4689999996532
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccC-HHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS-NLQVA 289 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~-~~DvA 289 (446)
..+..|+.+|...+.+.+ ..|++++.|.||++.++...... .|-. .+|++
T Consensus 149 --------~~~~~Y~asKaal~~~~~~la~el~~~~Irvn~v~PG~i~t~~~~~~~--------------~~~~~~~~~~ 206 (227)
T PRK08862 149 --------QDLTGVESSNALVSGFTHSWAKELTPFNIRVGGVVPSIFSANGELDAV--------------HWAEIQDELI 206 (227)
T ss_pred --------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcCcCCCccCHH--------------HHHHHHHHHH
Confidence 124579999999887765 36899999999999876321000 0111 17888
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
.+..+++.++.
T Consensus 207 ~~~~~l~~~~~ 217 (227)
T PRK08862 207 RNTEYIVANEY 217 (227)
T ss_pred hheeEEEeccc
Confidence 88888886543
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.70 E-value=7.2e-16 Score=157.61 Aligned_cols=183 Identities=15% Similarity=0.098 Sum_probs=131.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++|+||||+|+||+++++.|+++|++|++++|+.++..... ... ..++..+.+|++|.+++
T Consensus 176 l~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~---~~~-------------~~~v~~v~~Dvsd~~~v 239 (406)
T PRK07424 176 LKGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEI---NGE-------------DLPVKTLHWQVGQEAAL 239 (406)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH---hhc-------------CCCeEEEEeeCCCHHHH
Confidence 45689999999999999999999999999999999876543211 100 13467889999999999
Q ss_pred HHHhcCCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHh----CC----CCEEEEEccccccCCCCchhhhc
Q 013273 158 EPALGNASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATI----AK----VNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~----~~----v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
.+.++++|++|||||.... +.+++...+++|+.++.++++++.. .+ ...+|++|+.+. .. .
T Consensus 240 ~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~m~~~~~~~~~~iiVn~Ssa~~-~~-------~ 311 (406)
T PRK07424 240 AELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTTVKTNRDKATKEVWVNTSEAEV-NP-------A 311 (406)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEEccccc-cC-------C
Confidence 9999999999999996432 2223456789999999999999853 22 123555554322 10 1
Q ss_pred hhhHHHHHHHHHHHHH--H--hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 227 LFWGVLLWKRKAEEAL--I--ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l--~--~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
....|+.+|++.+.+. + +.++.+..+.||.+..+.. ..+.++++|+|+.++.+++++.
T Consensus 312 ~~~~Y~ASKaAl~~l~~l~~~~~~~~I~~i~~gp~~t~~~----------------~~~~~spe~vA~~il~~i~~~~ 373 (406)
T PRK07424 312 FSPLYELSKRALGDLVTLRRLDAPCVVRKLILGPFKSNLN----------------PIGVMSADWVAKQILKLAKRDF 373 (406)
T ss_pred CchHHHHHHHHHHHHHHHHHhCCCCceEEEEeCCCcCCCC----------------cCCCCCHHHHHHHHHHHHHCCC
Confidence 1246999999998753 2 2566677777776543210 0134799999999999998775
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=99.69 E-value=5.8e-17 Score=154.84 Aligned_cols=206 Identities=19% Similarity=0.208 Sum_probs=147.2
Q ss_pred CCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH----
Q 013273 87 GAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA---- 160 (446)
Q Consensus 87 Gat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a---- 160 (446)
|++ ++||+++++.|+++|++|++.+|+.++.....+++.+. ....++.+|++|.++++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~--------------~~~~~~~~D~~~~~~v~~~~~~~ 66 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKE--------------YGAEVIQCDLSDEESVEALFDEA 66 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHH--------------TTSEEEESCTTSHHHHHHHHHHH
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHH--------------cCCceEeecCcchHHHHHHHHHH
Confidence 666 99999999999999999999999998765544444332 1244699999999888777
Q ss_pred ---h-cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhh
Q 013273 161 ---L-GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 161 ---~-~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
+ +++|++|||+|.... +..++...+++|+.+...+++++.+. .-+++|++||.+.....
T Consensus 67 ~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~~~~~----- 141 (241)
T PF13561_consen 67 VERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAAQRPM----- 141 (241)
T ss_dssp HHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGGTSBS-----
T ss_pred HhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhhcccC-----
Confidence 4 678999999986543 11234455788999999988888543 22589999998664432
Q ss_pred hchhhHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCccccc--ccceeecccCcccCCccCHHHHHHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~--~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...+.+.+ . +||++++|.||++.++...... .............+.+..++|||+++++
T Consensus 142 -~~~~~y~~sKaal~~l~r~lA~el~~~~gIrVN~V~pG~i~t~~~~~~~~~~~~~~~~~~~~pl~r~~~~~evA~~v~f 220 (241)
T PF13561_consen 142 -PGYSAYSASKAALEGLTRSLAKELAPKKGIRVNAVSPGPIETPMTERIPGNEEFLEELKKRIPLGRLGTPEEVANAVLF 220 (241)
T ss_dssp -TTTHHHHHHHHHHHHHHHHHHHHHGGHGTEEEEEEEESSBSSHHHHHHHTHHHHHHHHHHHSTTSSHBEHHHHHHHHHH
T ss_pred -ccchhhHHHHHHHHHHHHHHHHHhccccCeeeeeecccceeccchhccccccchhhhhhhhhccCCCcCHHHHHHHHHH
Confidence 233479999999998876 4 7999999999999876321110 0001111122334556899999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
|+.+.. ...|+++.|-++
T Consensus 221 L~s~~a~~itG~~i~vDGG 239 (241)
T PF13561_consen 221 LASDAASYITGQVIPVDGG 239 (241)
T ss_dssp HHSGGGTTGTSEEEEESTT
T ss_pred HhCccccCccCCeEEECCC
Confidence 998763 346788877654
|
... |
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.7e-15 Score=135.75 Aligned_cols=163 Identities=18% Similarity=0.166 Sum_probs=121.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++|+||+|+||.++++.|+++|+ .|+++.|+..........++.++-. ..++.++.+|+.+.+++++
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~----------~~~~~~~~~D~~~~~~~~~ 70 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEAL----------GAEVTVVACDVADRAALAA 70 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhc----------CCeEEEEECCCCCHHHHHH
Confidence 4699999999999999999999996 6888888765443322111111100 1568889999999888777
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhc
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
++ ..+|+|||++|.... +..++...+++|+.++.++++++++.+.+++|++||....... .
T Consensus 71 ~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ii~~ss~~~~~~~------~ 144 (180)
T smart00822 71 ALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDLPLDFFVLFSSVAGVLGN------P 144 (180)
T ss_pred HHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccCCcceEEEEccHHHhcCC------C
Confidence 65 347999999985422 1233456688999999999999988888899999997553221 2
Q ss_pred hhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccC
Q 013273 227 LFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMER 259 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~g 259 (446)
....|+.+|...+.+++ ..|++++.+.||.+.|
T Consensus 145 ~~~~y~~sk~~~~~~~~~~~~~~~~~~~~~~g~~~~ 180 (180)
T smart00822 145 GQANYAAANAFLDALAAHRRARGLPATSINWGAWAD 180 (180)
T ss_pred CchhhHHHHHHHHHHHHHHHhcCCceEEEeeccccC
Confidence 34569999999998865 4789999999988743
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.66 E-value=5.8e-15 Score=150.71 Aligned_cols=253 Identities=17% Similarity=0.180 Sum_probs=165.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchh---HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL 151 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl 151 (446)
..+++|+|||||||+|.-+++.|++.- .+++++.|.... .+.+....+. .+....-+.......++..+.||+
T Consensus 10 ~~~k~i~vTG~tGFlgKVliEklLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~-~lF~~l~~~~p~~l~Kv~pi~GDi 88 (467)
T KOG1221|consen 10 YKNKTIFVTGATGFLGKVLIEKLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKD-PLFEVLKEKKPEALEKVVPIAGDI 88 (467)
T ss_pred hCCCeEEEEcccchhHHHHHHHHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhh-hHHHHHHhhCccceecceeccccc
Confidence 467899999999999999999999863 588999986532 1222211111 111100001222447899999999
Q ss_pred CCh------hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCC------
Q 013273 152 EKR------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKF------ 218 (446)
Q Consensus 152 ~d~------~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~------ 218 (446)
.++ .+++.+...+|+|||+|+.+..+ +.......+|..|+.++++.|++. ..+-|||+|+..+...
T Consensus 89 ~~~~LGis~~D~~~l~~eV~ivih~AAtvrFd-e~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E 167 (467)
T KOG1221|consen 89 SEPDLGISESDLRTLADEVNIVIHSAATVRFD-EPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEE 167 (467)
T ss_pred cCcccCCChHHHHHHHhcCCEEEEeeeeeccc-hhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccc
Confidence 864 45566678999999999865432 333456788999999999999987 6788999999766311
Q ss_pred ---CC-----chh-----------h---------hchhhHHHHHHHHHHHHHHh--CCCCEEEEecCCccCCCcc----c
Q 013273 219 ---GF-----PAA-----------I---------LNLFWGVLLWKRKAEEALIA--SGLPYTIVRPGGMERPTDA----Y 264 (446)
Q Consensus 219 ---~~-----~~~-----------~---------~~~~~~Y~~sK~~~E~~l~~--~gl~~tivRPg~v~gp~~~----~ 264 (446)
.. ++. . ...-..|.-+|+.+|.++.+ .+++.+|+||+.|...... |
T Consensus 168 ~~y~~~~~~~~~~~i~~~~~~~~~~ld~~~~~l~~~~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGW 247 (467)
T KOG1221|consen 168 KPYPMPETCNPEKILKLDENLSDELLDQKAPKLLGGWPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGW 247 (467)
T ss_pred cccCccccCCHHHHHhhhccchHHHHHHhhHHhcCCCCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCc
Confidence 00 000 0 01123488999999999985 6899999999888654211 1
Q ss_pred ----ccccceeeccc----------CcccCCccCHHHHHHHHHHHHhC--CCC--CCCcEEEEecCCC--CChhhHHHHH
Q 013273 265 ----KETHNITLSQE----------DTLFGGQVSNLQVAELLACMAKN--RSL--SYCKVVEVIAETT--APLTPMEELL 324 (446)
Q Consensus 265 ----~~~~~~~~~~~----------~~~~~~~v~~~DvA~ai~~ll~~--~~~--~~~~v~ni~~~~~--~t~~~i~e~l 324 (446)
.....+.++.+ .......|.+|.|+++++.+.-. ... ....|||++.... +++.++.++.
T Consensus 248 idn~~gp~g~i~g~gkGvlr~~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~~~~~~~IY~~tss~~Np~t~~~~~e~~ 327 (467)
T KOG1221|consen 248 IDNLNGPDGVIIGYGKGVLRCFLVDPKAVADIIPVDMVVNAMIASAWQHAGNSKEKTPPIYHLTSSNDNPVTWGDFIELA 327 (467)
T ss_pred cccCCCCceEEEEeccceEEEEEEccccccceeeHHHHHHHHHHHHHHHhccCCCCCCcEEEecccccCcccHHHHHHHH
Confidence 11111122211 11123568999999999876632 111 2356999988544 4778888888
Q ss_pred HhccCCCC
Q 013273 325 AKIPSQRA 332 (446)
Q Consensus 325 ~~i~~~~~ 332 (446)
.+.+.+.+
T Consensus 328 ~~~~~~~P 335 (467)
T KOG1221|consen 328 LRYFEKIP 335 (467)
T ss_pred HHhcccCC
Confidence 88876554
|
|
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.3e-15 Score=138.11 Aligned_cols=214 Identities=19% Similarity=0.192 Sum_probs=148.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++++||+.|+||+.+.++|+++|..+.++..+.+..+... +++ ...+...+.|+++|+++..++
T Consensus 3 ~tGKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~-----------ai~p~~~v~F~~~DVt~~~~~ 70 (261)
T KOG4169|consen 3 LTGKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQ-----------AINPSVSVIFIKCDVTNRGDL 70 (261)
T ss_pred ccCceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHh-----------ccCCCceEEEEEeccccHHHH
Confidence 45789999999999999999999999988888777766644432 333 224568899999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHH----Hh-C--CCCEEEEEccccccCCCCchh
Q 013273 158 EPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA----TI-A--KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa----~~-~--~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++| +.+|++||+||... ..+++....+|+.|..+-...+ .+ . ..+-+|++||...-.+
T Consensus 71 ~~~f~ki~~~fg~iDIlINgAGi~~--dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL~P----- 143 (261)
T KOG4169|consen 71 EAAFDKILATFGTIDILINGAGILD--DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGLDP----- 143 (261)
T ss_pred HHHHHHHHHHhCceEEEEccccccc--chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEeccccccCc-----
Confidence 8876 56899999999865 4567778889988876655444 33 3 2347999999765332
Q ss_pred hhchhhHHHHHHHHHH---------HHHHhCCCCEEEEecCCccCCCcccccccceeecccCcc-----cCCccCHHHHH
Q 013273 224 ILNLFWGVLLWKRKAE---------EALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL-----FGGQVSNLQVA 289 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E---------~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~-----~~~~v~~~DvA 289 (446)
...+..|+++|+.+- ...+++|+++..|+||.+-..-..........+...+.+ ..+.-+..++|
T Consensus 144 -~p~~pVY~AsKaGVvgFTRSla~~ayy~~sGV~~~avCPG~t~t~l~~~~~~~~~~~e~~~~~~~~l~~~~~q~~~~~a 222 (261)
T KOG4169|consen 144 -MPVFPVYAASKAGVVGFTRSLADLAYYQRSGVRFNAVCPGFTRTDLAENIDASGGYLEYSDSIKEALERAPKQSPACCA 222 (261)
T ss_pred -cccchhhhhcccceeeeehhhhhhhhHhhcCEEEEEECCCcchHHHHHHHHhcCCcccccHHHHHHHHHcccCCHHHHH
Confidence 233446999998543 334468999999999987543111000001111111111 12346788999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
+-++.+++.+. ++.+|-+..+.
T Consensus 223 ~~~v~aiE~~~--NGaiw~v~~g~ 244 (261)
T KOG4169|consen 223 INIVNAIEYPK--NGAIWKVDSGS 244 (261)
T ss_pred HHHHHHHhhcc--CCcEEEEecCc
Confidence 99999999864 57788766654
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.64 E-value=1e-14 Score=144.15 Aligned_cols=210 Identities=17% Similarity=0.090 Sum_probs=147.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++|||||++||+++++.|+.+|++|++..|+.++.+++.+.+... .....+.++++||.|..++
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~-----------~~~~~i~~~~lDLssl~SV 101 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKG-----------KANQKIRVIQLDLSSLKSV 101 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhc-----------CCCCceEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999998888887777641 2347899999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC----ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
.+.. ...|++|||||.... ..+..+..+.+|+.|...|.+.+. .....|||++||..........
T Consensus 102 ~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~~~~~~~~~ 181 (314)
T KOG1208|consen 102 RKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSILGGGKIDLK 181 (314)
T ss_pred HHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCccccCccchh
Confidence 8765 457999999996432 223467789999999888876663 3443699999997641100111
Q ss_pred hh-------hchhhHHHHHHHHHHHHHH----h--CCCCEEEEecCCccCCCcccccccceeecccCcccCCc-cCHHHH
Q 013273 223 AI-------LNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQV 288 (446)
Q Consensus 223 ~~-------~~~~~~Y~~sK~~~E~~l~----~--~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~-v~~~Dv 288 (446)
+. ......|+.||.+...... + .|+.++.+.||.|.++.-.. ...+.......+...+ -+.++-
T Consensus 182 ~l~~~~~~~~~~~~~Y~~SKla~~l~~~eL~k~l~~~V~~~~~hPG~v~t~~l~r--~~~~~~~l~~~l~~~~~ks~~~g 259 (314)
T KOG1208|consen 182 DLSGEKAKLYSSDAAYALSKLANVLLANELAKRLKKGVTTYSVHPGVVKTTGLSR--VNLLLRLLAKKLSWPLTKSPEQG 259 (314)
T ss_pred hccchhccCccchhHHHHhHHHHHHHHHHHHHHhhcCceEEEECCCcccccceec--chHHHHHHHHHHHHHhccCHHHH
Confidence 10 2223359999998765443 2 38999999999998873211 0000000001111112 367888
Q ss_pred HHHHHHHHhCCC
Q 013273 289 AELLACMAKNRS 300 (446)
Q Consensus 289 A~ai~~ll~~~~ 300 (446)
|+.++.++.+++
T Consensus 260 a~t~~~~a~~p~ 271 (314)
T KOG1208|consen 260 AATTCYAALSPE 271 (314)
T ss_pred hhheehhccCcc
Confidence 888888887774
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=99.63 E-value=5e-15 Score=132.83 Aligned_cols=144 Identities=19% Similarity=0.235 Sum_probs=114.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcC--chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS--VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~--~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+++||||+|+||+.+++.|+++| +.|+++.|+ .+....+.++++.. + .++.++++|+++.+++
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~---------~----~~~~~~~~D~~~~~~~ 67 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAP---------G----AKITFIECDLSDPESI 67 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHT---------T----SEEEEEESETTSHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccc---------c----cccccccccccccccc
Confidence 479999999999999999999995 578888888 55666665555432 2 6899999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhh
Q 013273 158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
++++ ..+|+||||+|..... .+++...+++|+.+...+.+++...+-++||++||.......
T Consensus 68 ~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 142 (167)
T PF00106_consen 68 RALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQGGGKIVNISSIAGVRGS----- 142 (167)
T ss_dssp HHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHTTEEEEEEEEGGGTSSS-----
T ss_pred cccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehheeccccceEEecchhhccCC-----
Confidence 8776 4689999999965422 223456688999999999999988666799999998764432
Q ss_pred hchhhHHHHHHHHHHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI 243 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~ 243 (446)
..+..|..+|...+.+.+
T Consensus 143 -~~~~~Y~askaal~~~~~ 160 (167)
T PF00106_consen 143 -PGMSAYSASKAALRGLTQ 160 (167)
T ss_dssp -TTBHHHHHHHHHHHHHHH
T ss_pred -CCChhHHHHHHHHHHHHH
Confidence 345579999999998875
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.59 E-value=3.8e-14 Score=139.96 Aligned_cols=229 Identities=14% Similarity=0.094 Sum_probs=135.5
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhccccc-ccCC-----------CCCCc
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELA-NKGI-----------QPVEM 143 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~-~~g~-----------~~~~~ 143 (446)
.++|+++||||+ .+||+++++.|+++|++|++.+|.+ ......+..+..+..-... ..|. .....
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~d~~~ 84 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGTWVP-IYKIFSQSLELGKFDASRKLSNGSLLTFAKIYPMDASFDT 84 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEeccc-hhhhhhhhcccccccccccccccchhhhhhHHHhhhhcCC
Confidence 567899999995 8999999999999999999977652 1111111110000000000 0000 00011
Q ss_pred eEEEEcCCCCh--------hcHHHH-------hcCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHHH
Q 013273 144 LELVECDLEKR--------VQIEPA-------LGNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAAT 200 (446)
Q Consensus 144 v~~v~~Dl~d~--------~~~~~a-------~~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa~ 200 (446)
.+-+.+|+.+. ++++++ ++++|++|||||... .+..+++..+++|+.+..++++++.
T Consensus 85 ~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~ 164 (299)
T PRK06300 85 PEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFGHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFG 164 (299)
T ss_pred CEEeecccCccccccCCCHHHHHHHHHHHHHHcCCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 22233333321 123433 357899999998532 1233456678999999999999886
Q ss_pred hC--CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCcccccc-cc
Q 013273 201 IA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-HN 269 (446)
Q Consensus 201 ~~--~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~~-~~ 269 (446)
.. .-+++|++||....... + .....|+.+|...+.+.+ . +|++++.|.||++.++....... ..
T Consensus 165 p~m~~~G~ii~iss~~~~~~~-p----~~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~~~~~~~~~~~ 239 (299)
T PRK06300 165 PIMNPGGSTISLTYLASMRAV-P----GYGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASRAGKAIGFIER 239 (299)
T ss_pred HHhhcCCeEEEEeehhhcCcC-C----CccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccChhhhcccccHH
Confidence 53 22589999986553221 1 111259999999987764 2 48999999999998763210000 00
Q ss_pred e-eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 270 I-TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 270 ~-~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
. .........+.....+|+|+++++++.... ...++++.+.++
T Consensus 240 ~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG 284 (299)
T PRK06300 240 MVDYYQDWAPLPEPMEAEQVGAAAAFLVSPLASAITGETLYVDHG 284 (299)
T ss_pred HHHHHHhcCCCCCCcCHHHHHHHHHHHhCccccCCCCCEEEECCC
Confidence 0 000011122346789999999999997643 346777877554
|
|
| >KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=128.49 Aligned_cols=195 Identities=20% Similarity=0.255 Sum_probs=144.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.+.+|.++|.||||-.|+.+++++++.+ .+|+++.|.+....+ ....+..+..|....
T Consensus 15 ~mq~~s~fvlGAtG~~G~~llk~~~E~~~FSKV~~i~RR~~~d~a--------------------t~k~v~q~~vDf~Kl 74 (238)
T KOG4039|consen 15 RMQNMSGFVLGATGLCGGGLLKHAQEAPQFSKVYAILRRELPDPA--------------------TDKVVAQVEVDFSKL 74 (238)
T ss_pred hhhccceEEEeccccccHHHHHHHHhcccceeEEEEEeccCCCcc--------------------ccceeeeEEechHHH
Confidence 3567889999999999999999999998 689999998532111 126788889999999
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
+++...+.+.|+.++|-|.+... ...+..++++-.....++++|++.|+++|+.+||.+++. .....|...
T Consensus 75 ~~~a~~~qg~dV~FcaLgTTRgk-aGadgfykvDhDyvl~~A~~AKe~Gck~fvLvSS~GAd~--------sSrFlY~k~ 145 (238)
T KOG4039|consen 75 SQLATNEQGPDVLFCALGTTRGK-AGADGFYKVDHDYVLQLAQAAKEKGCKTFVLVSSAGADP--------SSRFLYMKM 145 (238)
T ss_pred HHHHhhhcCCceEEEeecccccc-cccCceEeechHHHHHHHHHHHhCCCeEEEEEeccCCCc--------ccceeeeec
Confidence 99999999999999999865432 235677888888899999999999999999999998854 233469999
Q ss_pred HHHHHHHHHhCCCC-EEEEecCCccCCCccccccc---ceeecccCccc--CCccCHHHHHHHHHHHHhCCC
Q 013273 235 KRKAEEALIASGLP-YTIVRPGGMERPTDAYKETH---NITLSQEDTLF--GGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 235 K~~~E~~l~~~gl~-~tivRPg~v~gp~~~~~~~~---~~~~~~~~~~~--~~~v~~~DvA~ai~~ll~~~~ 300 (446)
|..+|.-+.+..++ ++|+|||.+.+.+....... ++....-...+ +--+.+.-++.+++..+..+.
T Consensus 146 KGEvE~~v~eL~F~~~~i~RPG~ll~~R~esr~geflg~~~~a~l~~~~~R~~s~pv~~~~~amvn~~~~~~ 217 (238)
T KOG4039|consen 146 KGEVERDVIELDFKHIIILRPGPLLGERTESRQGEFLGNLTAALLRSRFQRLLSYPVYGDEVAMVNVLNTSG 217 (238)
T ss_pred cchhhhhhhhccccEEEEecCcceecccccccccchhhheehhhhhhHHHhccCCchhhhhHhHhhccccCC
Confidence 99999999887775 78999999998764432111 11111101111 112455567777777666554
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.59 E-value=2.4e-15 Score=132.29 Aligned_cols=213 Identities=14% Similarity=0.089 Sum_probs=155.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++.|+|||+.-+||+.++..|++.|.+|+++.|++..+..+.++. ...++.+.+|+.+-+.+
T Consensus 5 laG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV~e~----------------p~~I~Pi~~Dls~wea~ 68 (245)
T KOG1207|consen 5 LAGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLVKET----------------PSLIIPIVGDLSAWEAL 68 (245)
T ss_pred ccceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHHhhC----------------CcceeeeEecccHHHHH
Confidence 46789999999999999999999999999999999998887776521 23488999999997777
Q ss_pred HHHhc---CCCEEEEcccCC------CCccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccCCCCchh
Q 013273 158 EPALG---NASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~~---~~D~VI~~Ag~~------~~~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~~~~~~~ 223 (446)
.+++. .+|.++||||.. +-..++++..|++|+.+..++.+...+. .-+.||++||....+.
T Consensus 69 ~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R~~~GaIVNvSSqas~R~----- 143 (245)
T KOG1207|consen 69 FKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDRQIKGAIVNVSSQASIRP----- 143 (245)
T ss_pred HHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhccCCceEEEecchhcccc-----
Confidence 77774 469999999953 2245667888999999999988875432 2246999999876443
Q ss_pred hhchhhHHHHHHHHHHHHHH----h---CCCCEEEEecCCccCCC--cccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPT--DAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~----~---~gl~~tivRPg~v~gp~--~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
....+.|..+|.+.+.+.+ + ..++++.+.|..+.... ++|.....-.--......+.|-.+++|.+++.+
T Consensus 144 -~~nHtvYcatKaALDmlTk~lAlELGp~kIRVNsVNPTVVmT~MG~dnWSDP~K~k~mL~riPl~rFaEV~eVVnA~lf 222 (245)
T KOG1207|consen 144 -LDNHTVYCATKAALDMLTKCLALELGPQKIRVNSVNPTVVMTDMGRDNWSDPDKKKKMLDRIPLKRFAEVDEVVNAVLF 222 (245)
T ss_pred -cCCceEEeecHHHHHHHHHHHHHhhCcceeEeeccCCeEEEecccccccCCchhccchhhhCchhhhhHHHHHHhhhee
Confidence 2334569999999887765 2 56899999999987652 233211111000111224467889999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
+|.+.. .+.|.++-+-++
T Consensus 223 LLSd~ssmttGstlpveGG 241 (245)
T KOG1207|consen 223 LLSDNSSMTTGSTLPVEGG 241 (245)
T ss_pred eeecCcCcccCceeeecCC
Confidence 998764 345555555443
|
|
| >KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.57 E-value=1.6e-13 Score=126.08 Aligned_cols=199 Identities=15% Similarity=0.087 Sum_probs=135.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.|+||||+.+||..||++|++. |.++++ ..|+++++.. +++.+ ....+++++++.|+++.+++
T Consensus 3 pksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~---~l~~k----------~~~d~rvHii~Ldvt~deS~ 69 (249)
T KOG1611|consen 3 PKSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAAT---ELALK----------SKSDSRVHIIQLDVTCDESI 69 (249)
T ss_pred CccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhH---HHHHh----------hccCCceEEEEEecccHHHH
Confidence 456999999999999999999986 666655 4556777522 22211 02248999999999998888
Q ss_pred HHHh---------cCCCEEEEcccCCCCc-------cCCCCCcccchHHHHHHHHHHH----HhCC-----------CCE
Q 013273 158 EPAL---------GNASVVICCIGASEKE-------VFDITGPYRIDFQATKNLVDAA----TIAK-----------VNH 206 (446)
Q Consensus 158 ~~a~---------~~~D~VI~~Ag~~~~~-------~~~~~~~~~vNv~g~~~l~~aa----~~~~-----------v~r 206 (446)
.+++ +++|++|||||..... ...+...+++|..++..+.+++ ++.. ...
T Consensus 70 ~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkkaas~~~gd~~s~~raa 149 (249)
T KOG1611|consen 70 DNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKKAASKVSGDGLSVSRAA 149 (249)
T ss_pred HHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHHHhhcccCCccccccee
Confidence 7765 5789999999964321 1113445889999988887766 2222 227
Q ss_pred EEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCccc
Q 013273 207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF 279 (446)
Q Consensus 207 ~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~ 279 (446)
+|++||.+....+ ....++..|..||.+.-.+.+ +.++-++.++||||-+... . .
T Consensus 150 IinisS~~~s~~~---~~~~~~~AYrmSKaAlN~f~ksls~dL~~~~ilv~sihPGwV~TDMg-----------g----~ 211 (249)
T KOG1611|consen 150 IINISSSAGSIGG---FRPGGLSAYRMSKAALNMFAKSLSVDLKDDHILVVSIHPGWVQTDMG-----------G----K 211 (249)
T ss_pred EEEeeccccccCC---CCCcchhhhHhhHHHHHHHHHHhhhhhcCCcEEEEEecCCeEEcCCC-----------C----C
Confidence 9999997654322 234567889999999988776 3677789999999976521 1 2
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEE
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEV 309 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni 309 (446)
...+.+++-+.-++..+.+=. ...|+.||-
T Consensus 212 ~a~ltveeSts~l~~~i~kL~~~hnG~ffn~ 242 (249)
T KOG1611|consen 212 KAALTVEESTSKLLASINKLKNEHNGGFFNR 242 (249)
T ss_pred CcccchhhhHHHHHHHHHhcCcccCcceEcc
Confidence 234677776666666665422 134555553
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=99.56 E-value=7.7e-14 Score=133.64 Aligned_cols=165 Identities=21% Similarity=0.261 Sum_probs=120.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK- 153 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d- 153 (446)
+..+++|+||||+++||+.+++.|++.|++|+++.|+... ...+.+... . .+. ..+.+..+|+++
T Consensus 2 ~~~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~----~-----~~~---~~~~~~~~Dvs~~ 69 (251)
T COG1028 2 DLSGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIK----E-----AGG---GRAAAVAADVSDD 69 (251)
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHH----h-----cCC---CcEEEEEecCCCC
Confidence 3567899999999999999999999999999998888664 333332222 0 010 357888899998
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhCCCC--EEEEEccccccC
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNK 217 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~--r~V~vSS~~~~~ 217 (446)
.++++.++ +++|++|||||.... ...+++..+.+|+.+...+.+++... .+ +||++||....
T Consensus 70 ~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~-~~~~~Iv~isS~~~~- 147 (251)
T COG1028 70 EESVEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPL-MKKQRIVNISSVAGL- 147 (251)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHh-hhhCeEEEECCchhc-
Confidence 77776655 568999999996432 12345666889999999988844322 22 99999998764
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCC
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp 260 (446)
..... +..|+.+|+..+.+.+ ..|++++.|.||.+..+
T Consensus 148 ~~~~~-----~~~Y~~sK~al~~~~~~l~~e~~~~gi~v~~v~PG~~~t~ 192 (251)
T COG1028 148 GGPPG-----QAAYAASKAALIGLTKALALELAPRGIRVNAVAPGYIDTP 192 (251)
T ss_pred CCCCC-----cchHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEeccCCCc
Confidence 32211 4679999998876653 37899999999977655
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.55 E-value=8.2e-14 Score=133.28 Aligned_cols=191 Identities=18% Similarity=0.154 Sum_probs=131.2
Q ss_pred HHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc----CCCEEEEcc
Q 013273 96 TVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG----NASVVICCI 171 (446)
Q Consensus 96 lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~----~~D~VI~~A 171 (446)
+++.|+++|++|++++|+.++.. ..+++++|++|.++++++++ ++|+|||||
T Consensus 1 ~a~~l~~~G~~Vv~~~r~~~~~~------------------------~~~~~~~Dl~~~~~v~~~~~~~~~~iD~li~nA 56 (241)
T PRK12428 1 TARLLRFLGARVIGVDRREPGMT------------------------LDGFIQADLGDPASIDAAVAALPGRIDALFNIA 56 (241)
T ss_pred ChHHHHhCCCEEEEEeCCcchhh------------------------hhHhhcccCCCHHHHHHHHHHhcCCCeEEEECC
Confidence 47899999999999999876431 12456899999999988874 589999999
Q ss_pred cCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc--------------h-------hhhchh
Q 013273 172 GASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP--------------A-------AILNLF 228 (446)
Q Consensus 172 g~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~--------------~-------~~~~~~ 228 (446)
|... ..+++..+++|+.++..+++++... ..++||++||......... . .+....
T Consensus 57 G~~~--~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (241)
T PRK12428 57 GVPG--TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLAGAEWPQRLELHKALAATASFDEGAAWLAAHPVALA 134 (241)
T ss_pred CCCC--CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHHhhccccchHHHHhhhccchHHHHHHhhhccCCCcc
Confidence 9753 2456677899999999999999754 2369999999876421100 0 122345
Q ss_pred hHHHHHHHHHHHHHH--------hCCCCEEEEecCCccCCCccccccc--ceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 229 WGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~--------~~gl~~tivRPg~v~gp~~~~~~~~--~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
..|+.+|...+.+.+ ..|+++++|+||++.++........ ...........+....++|+|+++++++.+
T Consensus 135 ~~Y~~sK~a~~~~~~~la~~e~~~~girvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~va~~~~~l~s~ 214 (241)
T PRK12428 135 TGYQLSKEALILWTMRQAQPWFGARGIRVNCVAPGPVFTPILGDFRSMLGQERVDSDAKRMGRPATADEQAAVLVFLCSD 214 (241)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccCeEEEEeecCCccCcccccchhhhhhHhhhhcccccCCCCCHHHHHHHHHHHcCh
Confidence 679999999886543 3689999999999998742110000 000000111223457899999999999865
Q ss_pred CC-CCCCcEEEEecC
Q 013273 299 RS-LSYCKVVEVIAE 312 (446)
Q Consensus 299 ~~-~~~~~v~ni~~~ 312 (446)
.. ...++++.+.++
T Consensus 215 ~~~~~~G~~i~vdgg 229 (241)
T PRK12428 215 AARWINGVNLPVDGG 229 (241)
T ss_pred hhcCccCcEEEecCc
Confidence 43 234666655444
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=7.1e-14 Score=134.56 Aligned_cols=161 Identities=20% Similarity=0.172 Sum_probs=125.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
...+.|+|||+-.+.|+.|+++|.++|+.|.+..-.++.++.+..+ ...+++..++.|+++++++
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~---------------~~s~rl~t~~LDVT~~esi 91 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGE---------------TKSPRLRTLQLDVTKPESV 91 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhh---------------hcCCcceeEeeccCCHHHH
Confidence 4567899999999999999999999999999999887777765432 2248999999999999999
Q ss_pred HHHh---------cCCCEEEEcccCCC-Ccc------CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC
Q 013273 158 EPAL---------GNASVVICCIGASE-KEV------FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~---------~~~D~VI~~Ag~~~-~~~------~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~ 217 (446)
+++. .+.-.||||||... ... +++....++|..|+..+..+.. ++. +|+|++||.+...
T Consensus 92 ~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~ar-GRvVnvsS~~GR~ 170 (322)
T KOG1610|consen 92 KEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRAR-GRVVNVSSVLGRV 170 (322)
T ss_pred HHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhcc-CeEEEecccccCc
Confidence 9886 35799999999542 222 2345568899999999888774 343 5999999987633
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHH-------HhCCCCEEEEecCCccCC
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERP 260 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tivRPg~v~gp 260 (446)
.. ....+|..||.++|.+. +..|+++.+|-||.+-.+
T Consensus 171 ~~------p~~g~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG~f~T~ 214 (322)
T KOG1610|consen 171 AL------PALGPYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPGFFKTN 214 (322)
T ss_pred cC------cccccchhhHHHHHHHHHHHHHHHHhcCcEEEEeccCccccc
Confidence 21 33457999999998653 358999999999955433
|
|
| >KOG4288 consensus Predicted oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.54 E-value=2.2e-14 Score=131.60 Aligned_cols=193 Identities=20% Similarity=0.157 Sum_probs=147.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
...++.|+.||.|.++++.....|+.|.++.|+..+.- .+ .+...+.++.+|+....-++..
T Consensus 53 e~tlvlggnpfsgs~vlk~A~~vv~svgilsen~~k~~--l~----------------sw~~~vswh~gnsfssn~~k~~ 114 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNATNVVHSVGILSENENKQT--LS----------------SWPTYVSWHRGNSFSSNPNKLK 114 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHHhhceeeeEeecccCcch--hh----------------CCCcccchhhccccccCcchhh
Confidence 46899999999999999999999999999999976321 11 2346788899999888878888
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
+.+...|+-++|... ....+.++|-.+..+.+++++++|+++|+|+|-.. ++.+. .. ..+|..+|+.+|.
T Consensus 115 l~g~t~v~e~~ggfg----n~~~m~~ing~ani~a~kaa~~~gv~~fvyISa~d---~~~~~--~i-~rGY~~gKR~AE~ 184 (283)
T KOG4288|consen 115 LSGPTFVYEMMGGFG----NIILMDRINGTANINAVKAAAKAGVPRFVYISAHD---FGLPP--LI-PRGYIEGKREAEA 184 (283)
T ss_pred hcCCcccHHHhcCcc----chHHHHHhccHhhHHHHHHHHHcCCceEEEEEhhh---cCCCC--cc-chhhhccchHHHH
Confidence 899999999998643 23556788999999999999999999999999633 22211 12 2389999999997
Q ss_pred HHH-hCCCCEEEEecCCccCCCcccccccc-------------------eeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 241 ALI-ASGLPYTIVRPGGMERPTDAYKETHN-------------------ITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 241 ~l~-~~gl~~tivRPg~v~gp~~~~~~~~~-------------------~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.|. .++.+-+++|||.|||.+........ ..+..-+.+...+|.+++||.+.+.++++++
T Consensus 185 Ell~~~~~rgiilRPGFiyg~R~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp~ 264 (283)
T KOG4288|consen 185 ELLKKFRFRGIILRPGFIYGTRNVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDPD 264 (283)
T ss_pred HHHHhcCCCceeeccceeecccccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCCC
Confidence 765 57899999999999998432111000 0112223445578999999999999999998
Q ss_pred C
Q 013273 301 L 301 (446)
Q Consensus 301 ~ 301 (446)
+
T Consensus 265 f 265 (283)
T KOG4288|consen 265 F 265 (283)
T ss_pred c
Confidence 3
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.4e-13 Score=129.65 Aligned_cols=202 Identities=16% Similarity=0.115 Sum_probs=143.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
.+|+||||+.+||..++.++..+|++|+++.|+..+..++.++++-. .....|.+..+|+.|.+++..+
T Consensus 34 ~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~-----------~~~~~v~~~S~d~~~Y~~v~~~ 102 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELL-----------TQVEDVSYKSVDVIDYDSVSKV 102 (331)
T ss_pred ceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhh-----------hccceeeEeccccccHHHHHHH
Confidence 58999999999999999999999999999999999999888776543 1123477999999998888877
Q ss_pred hc-------CCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccCCCCch
Q 013273 161 LG-------NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~~-------~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ .+|.+|||||..- ....+....+++|+.|+.|++.++..+ +.++|+.+||..+.-.
T Consensus 103 ~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~---- 178 (331)
T KOG1210|consen 103 IEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLG---- 178 (331)
T ss_pred HhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcC----
Confidence 63 4699999999532 233344556889999999999888532 2448999999544111
Q ss_pred hhhchhhHHHHHHHHHHHH-------HHhCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccCHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~-------l~~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
....+.|..+|.+.-.+ +..+|+.++..-|+.+..|+-... .+..... .-.....+.+..+|+|.+++.
T Consensus 179 --i~GysaYs~sK~alrgLa~~l~qE~i~~~v~Vt~~~P~~~~tpGfE~En~tkP~~t-~ii~g~ss~~~~e~~a~~~~~ 255 (331)
T KOG1210|consen 179 --IYGYSAYSPSKFALRGLAEALRQELIKYGVHVTLYYPPDTLTPGFERENKTKPEET-KIIEGGSSVIKCEEMAKAIVK 255 (331)
T ss_pred --cccccccccHHHHHHHHHHHHHHHHhhcceEEEEEcCCCCCCCccccccccCchhe-eeecCCCCCcCHHHHHHHHHh
Confidence 12344677787755433 334799999999999998852111 1111100 001112345888999999998
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
=+...+
T Consensus 256 ~~~rg~ 261 (331)
T KOG1210|consen 256 GMKRGN 261 (331)
T ss_pred HHhhcC
Confidence 776554
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.9e-13 Score=124.17 Aligned_cols=159 Identities=14% Similarity=0.140 Sum_probs=123.8
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...++|||||+ .|+||.+|++++.++|+.|++..|..+...+|... .++...+.|++++++
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~------------------~gl~~~kLDV~~~~~ 66 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQ------------------FGLKPYKLDVSKPEE 66 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHh------------------hCCeeEEeccCChHH
Confidence 34578888875 69999999999999999999999999888876532 468899999999988
Q ss_pred HHHHh--------cCCCEEEEcccCC------CCccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCC
Q 013273 157 IEPAL--------GNASVVICCIGAS------EKEVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~--------~~~D~VI~~Ag~~------~~~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~ 219 (446)
+.+.. +..|++|||||.. +.+..+.+..|++|+.|..++.++.... .-+.||++.|..+.-+.
T Consensus 67 V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~vpf 146 (289)
T KOG1209|consen 67 VVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGVVPF 146 (289)
T ss_pred HHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEEecc
Confidence 87764 4579999999953 3344455677999999998888877522 22489999998764432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp 260 (446)
.....|.++|+++-.+.+ -.|++++.+-+|+|-..
T Consensus 147 ------pf~~iYsAsKAAihay~~tLrlEl~PFgv~Vin~itGGv~T~ 188 (289)
T KOG1209|consen 147 ------PFGSIYSASKAAIHAYARTLRLELKPFGVRVINAITGGVATD 188 (289)
T ss_pred ------chhhhhhHHHHHHHHhhhhcEEeeeccccEEEEecccceecc
Confidence 223469999999887754 26899999999998765
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.47 E-value=6.3e-13 Score=120.30 Aligned_cols=160 Identities=16% Similarity=0.104 Sum_probs=119.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+||||||+.+||+.|++++.+.|-+|++..|++.++++..+. .+.+.-..+|+.|.+++
T Consensus 3 ~tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~-----------------~p~~~t~v~Dv~d~~~~ 65 (245)
T COG3967 3 TTGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAE-----------------NPEIHTEVCDVADRDSR 65 (245)
T ss_pred ccCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhc-----------------CcchheeeecccchhhH
Confidence 4567899999999999999999999999999999999888765432 27788889999999877
Q ss_pred HHHh-------cCCCEEEEcccCCCC-ccC-------CCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-EVF-------DITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-~~~-------~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~~ 218 (446)
.+++ -..++||||||.... +.. +.+...++|+.++..|..+...+ .-.-+|+|||.-+..+
T Consensus 66 ~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~~a~IInVSSGLafvP 145 (245)
T COG3967 66 RELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQPEATIINVSSGLAFVP 145 (245)
T ss_pred HHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCCCceEEEeccccccCc
Confidence 7665 357999999996432 111 12334678999999988887543 3347999999654222
Q ss_pred CCchhhhchhhHHHHHHHHHHHH-------HHhCCCCEEEEecCCccCC
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEA-------LIASGLPYTIVRPGGMERP 260 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~-------l~~~gl~~tivRPg~v~gp 260 (446)
+...-.|..+|+.+-.+ ++..++++.=+-|..|-.+
T Consensus 146 ------m~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 146 ------MASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred ------ccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 12223599999877644 2346889988888888764
|
|
| >KOG2774 consensus NAD dependent epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.45 E-value=7.5e-13 Score=121.82 Aligned_cols=232 Identities=12% Similarity=0.070 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+..+|||||+-|.+|..++..|... |.+-++++.--...+.+. ..--++..|+.|...
T Consensus 42 ~~~PrvLITG~LGQLG~~~A~LLR~~yGs~~VILSDI~KPp~~V~--------------------~~GPyIy~DILD~K~ 101 (366)
T KOG2774|consen 42 QKAPRVLITGSLGQLGRGLASLLRYMYGSECVILSDIVKPPANVT--------------------DVGPYIYLDILDQKS 101 (366)
T ss_pred CCCCeEEEecchHHHhHHHHHHHHHHhCCccEehhhccCCchhhc--------------------ccCCchhhhhhcccc
Confidence 34568999999999999999999876 766555443211111111 223467789999999
Q ss_pred HHHHh--cCCCEEEEcccC-CCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch------hhhch
Q 013273 157 IEPAL--GNASVVICCIGA-SEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA------AILNL 227 (446)
Q Consensus 157 ~~~a~--~~~D~VI~~Ag~-~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~------~~~~~ 227 (446)
+++++ ..+|.+||..+. ...+..+.....++|+.|..|+++.|++++. ++..-|++|+..+..+. ....|
T Consensus 102 L~eIVVn~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~kL-~iFVPSTIGAFGPtSPRNPTPdltIQRP 180 (366)
T KOG2774|consen 102 LEEIVVNKRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKHKL-KVFVPSTIGAFGPTSPRNPTPDLTIQRP 180 (366)
T ss_pred HHHhhcccccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHcCe-eEeecccccccCCCCCCCCCCCeeeecC
Confidence 99988 568999999763 2233445566789999999999999999998 45457888874443322 23567
Q ss_pred hhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccceee--------------cccCcccCCccCHHHHH
Q 013273 228 FWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITL--------------SQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~--------------~~~~~~~~~~v~~~DvA 289 (446)
.+.||.+|..+|.+-. ..|+++.++|...+.......+.+..+.. ..+....-..++.+|+-
T Consensus 181 RTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~pgggttdya~A~f~~Al~~gk~tCylrpdtrlpmmy~~dc~ 260 (366)
T KOG2774|consen 181 RTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATKPGGGTTDYAIAIFYDALQKGKHTCYLRPDTRLPMMYDTDCM 260 (366)
T ss_pred ceeechhHHHHHHHHHHHHhhcCccceecccCcccccCCCCCCcchhHHHHHHHHHHcCCcccccCCCccCceeehHHHH
Confidence 7889999998875543 57999999998877654322222222211 11112222468999999
Q ss_pred HHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 290 ELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 290 ~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++++.++..+.. -..++||+.+-. .+..|+.+.+.+.....
T Consensus 261 ~~~~~~~~a~~~~lkrr~ynvt~~s-ftpee~~~~~~~~~p~~ 302 (366)
T KOG2774|consen 261 ASVIQLLAADSQSLKRRTYNVTGFS-FTPEEIADAIRRVMPGF 302 (366)
T ss_pred HHHHHHHhCCHHHhhhheeeeceec-cCHHHHHHHHHhhCCCc
Confidence 999998876542 357899998754 56778888888776444
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=99.42 E-value=2.2e-12 Score=155.47 Aligned_cols=167 Identities=15% Similarity=0.118 Sum_probs=123.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCch--------------hH-------------------------
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQ--------------RA------------------------- 117 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~--------------~~------------------------- 117 (446)
..++++|||||+|+||..++++|+++ |++|++++|+.. .+
T Consensus 1995 ~~g~vvLVTGGarGIG~aiA~~LA~~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~~~~ 2074 (2582)
T TIGR02813 1995 NSDDVFLVTGGAKGVTFECALELAKQCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDALVR 2074 (2582)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHhcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhhccc
Confidence 35689999999999999999999998 699999999821 00
Q ss_pred -----HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc------CCCEEEEcccCCC------CccCC
Q 013273 118 -----ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG------NASVVICCIGASE------KEVFD 180 (446)
Q Consensus 118 -----~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~------~~D~VI~~Ag~~~------~~~~~ 180 (446)
.++.+.++.++- .| .++.++.+|++|.+++++++. ++|+||||||... .+..+
T Consensus 2075 ~~~~~~ei~~~la~l~~------~G----~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~ 2144 (2582)
T TIGR02813 2075 PVLSSLEIAQALAAFKA------AG----ASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEE 2144 (2582)
T ss_pred ccchhHHHHHHHHHHHh------cC----CcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHH
Confidence 000000111100 11 568899999999998887773 5899999999632 23445
Q ss_pred CCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHHh-----CCCCEEEEecC
Q 013273 181 ITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPG 255 (446)
Q Consensus 181 ~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg 255 (446)
+...+++|+.|+.++++++.....++||++||..+.... ..+..|+.+|...+.+.+. .+++++.|.||
T Consensus 2145 f~~v~~~nv~G~~~Ll~al~~~~~~~IV~~SSvag~~G~------~gqs~YaaAkaaL~~la~~la~~~~~irV~sI~wG 2218 (2582)
T TIGR02813 2145 FNAVYGTKVDGLLSLLAALNAENIKLLALFSSAAGFYGN------TGQSDYAMSNDILNKAALQLKALNPSAKVMSFNWG 2218 (2582)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEEEechhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHcCCcEEEEEECC
Confidence 667799999999999999988777799999997653221 2345799999988766542 36899999999
Q ss_pred CccCC
Q 013273 256 GMERP 260 (446)
Q Consensus 256 ~v~gp 260 (446)
.+-+.
T Consensus 2219 ~wdtg 2223 (2582)
T TIGR02813 2219 PWDGG 2223 (2582)
T ss_pred eecCC
Confidence 88764
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.39 E-value=4.1e-13 Score=118.09 Aligned_cols=213 Identities=16% Similarity=0.169 Sum_probs=151.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++-+.|||||..++|+..++.|++.|..|.+++-..++..+..+++ | .++.|...|++...+
T Consensus 6 s~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakel------------g----~~~vf~padvtsekd 69 (260)
T KOG1199|consen 6 STKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKEL------------G----GKVVFTPADVTSEKD 69 (260)
T ss_pred hhcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHh------------C----CceEEeccccCcHHH
Confidence 455678999999999999999999999999999999888877766554 2 689999999999888
Q ss_pred HHHHh-------cCCCEEEEcccCC------------CCccCCCCCcccchHHHHHHHHHHHHh--------CCCCE--E
Q 013273 157 IEPAL-------GNASVVICCIGAS------------EKEVFDITGPYRIDFQATKNLVDAATI--------AKVNH--F 207 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~------------~~~~~~~~~~~~vNv~g~~~l~~aa~~--------~~v~r--~ 207 (446)
+..++ ++.|+.|||||.. .++.+++....++|+.|+.|+++.... ++..| +
T Consensus 70 v~aala~ak~kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgvi 149 (260)
T KOG1199|consen 70 VRAALAKAKAKFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVI 149 (260)
T ss_pred HHHHHHHHHhhccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEE
Confidence 88776 5689999999952 234556777889999999999876642 22233 5
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHH----H---hCCCCEEEEecCCccCCCcccc-cccceeecccCccc
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL----I---ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLF 279 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l----~---~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~ 279 (446)
|+..|...... .-....|.++|..+-.+. | -.|++++.|.||.+-.|.-... +...-.+.......
T Consensus 150 intasvaafdg------q~gqaaysaskgaivgmtlpiardla~~gir~~tiapglf~tpllsslpekv~~fla~~ipfp 223 (260)
T KOG1199|consen 150 INTASVAAFDG------QTGQAAYSASKGAIVGMTLPIARDLAGDGIRFNTIAPGLFDTPLLSSLPEKVKSFLAQLIPFP 223 (260)
T ss_pred EeeceeeeecC------ccchhhhhcccCceEeeechhhhhcccCceEEEeecccccCChhhhhhhHHHHHHHHHhCCCc
Confidence 55555444221 123457999998654332 2 3689999999999988742111 00000111111222
Q ss_pred CCccCHHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 280 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
...-|+.+.+..+-.+++|+- -+++++.+-+.
T Consensus 224 srlg~p~eyahlvqaiienp~-lngevir~dga 255 (260)
T KOG1199|consen 224 SRLGHPHEYAHLVQAIIENPY-LNGEVIRFDGA 255 (260)
T ss_pred hhcCChHHHHHHHHHHHhCcc-cCCeEEEecce
Confidence 235788999999999999987 57888877553
|
|
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=99.39 E-value=8.6e-12 Score=114.30 Aligned_cols=157 Identities=21% Similarity=0.213 Sum_probs=108.9
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch---hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~---~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++|||||+|.||..+++.|+++| .+|+++.|+.. ....+.++++.. | .++.++.+|++|.+++
T Consensus 2 tylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~---------g----~~v~~~~~Dv~d~~~v 68 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESA---------G----ARVEYVQCDVTDPEAV 68 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHT---------T-----EEEEEE--TTSHHHH
T ss_pred EEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhC---------C----CceeeeccCccCHHHH
Confidence 68999999999999999999998 58999999932 233344444432 2 5899999999999999
Q ss_pred HHHhc-------CCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhh
Q 013273 158 EPALG-------NASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
++++. .++.|||+||...... .+....+...+.|..+|.++........||.+||+.....+
T Consensus 69 ~~~~~~~~~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~~l~~~i~~SSis~~~G~----- 143 (181)
T PF08659_consen 69 AAALAQLRQRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENRPLDFFILFSSISSLLGG----- 143 (181)
T ss_dssp HHHHHTSHTTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTTTTSEEEEEEEHHHHTT------
T ss_pred HHHHHHHHhccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcCCCCeEEEECChhHhccC-----
Confidence 99873 4689999999753221 12223345578899999999988889999999997653222
Q ss_pred hchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCc
Q 013273 225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGM 257 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v 257 (446)
.....|...-...+.+.+ ..|.+++.|.-|..
T Consensus 144 -~gq~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~W 178 (181)
T PF08659_consen 144 -PGQSAYAAANAFLDALARQRRSRGLPAVSINWGAW 178 (181)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-EB
T ss_pred -cchHhHHHHHHHHHHHHHHHHhCCCCEEEEEcccc
Confidence 234568888888887664 47888888876654
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.38 E-value=1e-11 Score=119.72 Aligned_cols=163 Identities=17% Similarity=0.140 Sum_probs=125.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc----
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ---- 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~---- 156 (446)
.-++|||||.+||+..+++|+++|.+|++++|+.+|+..+.+++++. ..-.+.++..|+++.+.
T Consensus 50 ~WAVVTGaTDGIGKayA~eLAkrG~nvvLIsRt~~KL~~v~kEI~~~------------~~vev~~i~~Dft~~~~~ye~ 117 (312)
T KOG1014|consen 50 SWAVVTGATDGIGKAYARELAKRGFNVVLISRTQEKLEAVAKEIEEK------------YKVEVRIIAIDFTKGDEVYEK 117 (312)
T ss_pred CEEEEECCCCcchHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHH------------hCcEEEEEEEecCCCchhHHH
Confidence 56999999999999999999999999999999999999999988764 11468899999998665
Q ss_pred HHHHhcC--CCEEEEcccCCCCc--------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 157 IEPALGN--ASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 157 ~~~a~~~--~D~VI~~Ag~~~~~--------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+.+.+.+ +.++|||+|..... ....+....+|+.++..+.+... +.+-+-+|++||.+...+
T Consensus 118 i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r~~G~IvnigS~ag~~p---- 193 (312)
T KOG1014|consen 118 LLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVERKKGIIVNIGSFAGLIP---- 193 (312)
T ss_pred HHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcCCCceEEEecccccccc----
Confidence 4555554 57999999965421 11234557789988887777664 335568999999776332
Q ss_pred hhhchhhHHHHHHHHHHHHH-------HhCCCCEEEEecCCccCCC
Q 013273 223 AILNLFWGVLLWKRKAEEAL-------IASGLPYTIVRPGGMERPT 261 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l-------~~~gl~~tivRPg~v~gp~ 261 (446)
...+..|+.+|...+.+- +..|+.+-.|-|..|-++.
T Consensus 194 --~p~~s~ysasK~~v~~~S~~L~~Ey~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 194 --TPLLSVYSASKAFVDFFSRCLQKEYESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred --ChhHHHHHHHHHHHHHHHHHHHHHHHhcCeEEEEeehhheeccc
Confidence 345677999999766543 3479999999999987764
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.5e-10 Score=104.85 Aligned_cols=125 Identities=15% Similarity=0.167 Sum_probs=87.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++++||||+|+||+.+++.|++.|++|++++|+.+......+++... + ..+.++.+|++|.+++
T Consensus 14 l~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~v 80 (169)
T PRK06720 14 LAGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNL---------G----GEALFVSYDMEKQGDW 80 (169)
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 45789999999999999999999999999999999877665554444321 1 4577889999998887
Q ss_pred HHHh-------cCCCEEEEcccCCCCc--cCC-C-CCcccchHHHHHHHHHHHH----h-------CCCCEEEEEccccc
Q 013273 158 EPAL-------GNASVVICCIGASEKE--VFD-I-TGPYRIDFQATKNLVDAAT----I-------AKVNHFIMVSSLGT 215 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~--~~~-~-~~~~~vNv~g~~~l~~aa~----~-------~~v~r~V~vSS~~~ 215 (446)
++++ +++|++|||||..... .++ . .....+|+.++......+. + .+.+||..+|+.+.
T Consensus 81 ~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (169)
T PRK06720 81 QRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFMKQQEEVVLSDLPIFGIIGTKGQ 160 (169)
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHHhcCCEEEeecCceeeEeccccc
Confidence 7754 5789999999964321 111 0 0112445555444444432 2 24679999998766
|
|
| >KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.1e-11 Score=112.03 Aligned_cols=242 Identities=14% Similarity=0.064 Sum_probs=157.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
..+..||||-||.=|++|++.|+..|++|..+.|..+..... .++.+ .++ -..-.........+|++|...+.
T Consensus 27 ~rkvALITGItGQDGSYLaEfLL~KgYeVHGiiRRsSsFNT~--RIeHl--Y~n---P~~h~~~~mkLHYgDmTDss~L~ 99 (376)
T KOG1372|consen 27 PRKVALITGITGQDGSYLAEFLLSKGYEVHGIIRRSSSFNTA--RIEHL--YSN---PHTHNGASMKLHYGDMTDSSCLI 99 (376)
T ss_pred cceEEEEecccCCCchHHHHHHHhCCceeeEEEeeccccchh--hhhhh--hcC---chhcccceeEEeeccccchHHHH
Confidence 456899999999999999999999999999999876543221 11111 100 00011256788889999999999
Q ss_pred HHhcC--CCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCC---EEEEEccccccC-----CCCchhhhc
Q 013273 159 PALGN--ASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNK-----FGFPAAILN 226 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~---r~V~vSS~~~~~-----~~~~~~~~~ 226 (446)
+++.. .+-|+|+|+... .+..-+++.-+++..|+.+|+++.+.++.. ||-..||.-.+. +..+..+.-
T Consensus 100 k~I~~ikPtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQsE~TPFy 179 (376)
T KOG1372|consen 100 KLISTIKPTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQSETTPFY 179 (376)
T ss_pred HHHhccCchhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcccCCCCC
Confidence 99865 488999998542 233345666788999999999999876422 787777753311 122334566
Q ss_pred hhhHHHHHHHHHHHHHHhCCCCEEE-EecCCccC---CCc--ccccccc-------eeec-------ccCcccCCccCHH
Q 013273 227 LFWGVLLWKRKAEEALIASGLPYTI-VRPGGMER---PTD--AYKETHN-------ITLS-------QEDTLFGGQVSNL 286 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~gl~~ti-vRPg~v~g---p~~--~~~~~~~-------~~~~-------~~~~~~~~~v~~~ 286 (446)
|.++|+.+|..+-.++-++.=.|.. -+-|.+|. |.. +|. +.. +.++ ........|-|..
T Consensus 180 PRSPYa~aKmy~~WivvNyREAYnmfAcNGILFNHESPRRGenFV-TRKItRsvakI~~gqqe~~~LGNL~a~RDWGhA~ 258 (376)
T KOG1372|consen 180 PRSPYAAAKMYGYWIVVNYREAYNMFACNGILFNHESPRRGENFV-TRKITRSVAKISLGQQEKIELGNLSALRDWGHAG 258 (376)
T ss_pred CCChhHHhhhhheEEEEEhHHhhcceeeccEeecCCCCccccchh-hHHHHHHHHHhhhcceeeEEecchhhhcccchhH
Confidence 7888999998765544221111221 23344443 321 110 000 1111 1122244789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
|..++||.+|+++. ..-|-|..+...+..+++++.....|+.
T Consensus 259 dYVEAMW~mLQ~d~---PdDfViATge~hsVrEF~~~aF~~ig~~ 300 (376)
T KOG1372|consen 259 DYVEAMWLMLQQDS---PDDFVIATGEQHSVREFCNLAFAEIGEV 300 (376)
T ss_pred HHHHHHHHHHhcCC---CCceEEecCCcccHHHHHHHHHHhhCcE
Confidence 99999999999876 3456678888888888888877776644
|
|
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=3.3e-10 Score=103.39 Aligned_cols=155 Identities=15% Similarity=0.124 Sum_probs=111.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++|||||||+|. +++.|++.|++|++++|+.++...+...+.. ..++.++.+|+.|.+++.++
T Consensus 1 m~vlVtGGtG~gg~-la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~--------------~~~i~~~~~Dv~d~~sv~~~ 65 (177)
T PRK08309 1 MHALVIGGTGMLKR-VSLWLCEKGFHVSVIARREVKLENVKRESTT--------------PESITPLPLDYHDDDALKLA 65 (177)
T ss_pred CEEEEECcCHHHHH-HHHHHHHCcCEEEEEECCHHHHHHHHHHhhc--------------CCcEEEEEccCCCHHHHHHH
Confidence 57999999988876 9999999999999999998766555432211 15788999999999998887
Q ss_pred hc-------CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC----EEEEEccccccCCCCchhhhchhh
Q 013273 161 LG-------NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN----HFIMVSSLGTNKFGFPAAILNLFW 229 (446)
Q Consensus 161 ~~-------~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~----r~V~vSS~~~~~~~~~~~~~~~~~ 229 (446)
+. .+|.+|+.+ .+.++.++..+|++.+++ ||||+=...+...
T Consensus 66 i~~~l~~~g~id~lv~~v----------------h~~~~~~~~~~~~~~gv~~~~~~~~h~~gs~~~~~----------- 118 (177)
T PRK08309 66 IKSTIEKNGPFDLAVAWI----------------HSSAKDALSVVCRELDGSSETYRLFHVLGSAASDP----------- 118 (177)
T ss_pred HHHHHHHcCCCeEEEEec----------------cccchhhHHHHHHHHccCCCCceEEEEeCCcCCch-----------
Confidence 73 457777664 345688999999999998 8999764333110
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 230 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
+...+.... .+..|-=|..|.+.-.+ ...|..-+++++.++.+++++.
T Consensus 119 -----~~~~~~~~~-~~~~~~~i~lgf~~~~~-----------------~~rwlt~~ei~~gv~~~~~~~~ 166 (177)
T PRK08309 119 -----RIPSEKIGP-ARCSYRRVILGFVLEDT-----------------YSRWLTHEEISDGVIKAIESDA 166 (177)
T ss_pred -----hhhhhhhhh-cCCceEEEEEeEEEeCC-----------------ccccCchHHHHHHHHHHHhcCC
Confidence 222223222 45566666666664221 2246788899999999998875
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.23 E-value=3e-11 Score=127.08 Aligned_cols=82 Identities=37% Similarity=0.532 Sum_probs=56.4
Q ss_pred CCCCCCCcccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCcccCCCCCCCC
Q 013273 357 SAPITEEPVQTKAKVTDPLSPYTSYEDLKPSSSPSPTPSTTPG-ASKTSDIDAKPVASKSTPLSEPSSTTTKKEAPKSEM 435 (446)
Q Consensus 357 ~~~~~~~~~~~~~~~~~Plspy~~~~~lkp~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (446)
...+..+..|....+.||||||..|+||||||||||+++++.. +++..+.+ +++++++++ ++.+ ++ +++++
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~-~a~~-d~-~~~~~ 491 (576)
T PLN03209 420 SNVPEVEPAQVEAKKTRPLSPYARYEDLKPPTSPSPTAPTGVSPSVSSTSSV-----PAVPDTAPA-TAAT-DA-AAPPP 491 (576)
T ss_pred ccCccccccccccCCCCCCCcccccccCCCCCCCCCCCCCCccccccccccc-----CCCCCCCCc-cccc-cc-ccCCC
Confidence 3455667777788899999999999999999999999987432 12221221 223333333 2222 33 78889
Q ss_pred CCCCCCCCCCC
Q 013273 436 KKTEPLSPYIA 446 (446)
Q Consensus 436 ~~~~p~sp~~~ 446 (446)
+++||||||+.
T Consensus 492 ~~~~plspy~~ 502 (576)
T PLN03209 492 ANMRPLSPYAV 502 (576)
T ss_pred CCCCCCCcchh
Confidence 99999999974
|
|
| >KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.14 E-value=1e-10 Score=107.35 Aligned_cols=220 Identities=12% Similarity=0.036 Sum_probs=138.7
Q ss_pred CEEEEECCCcHHHHHHHH-----HHHHCC----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC
Q 013273 81 NLAFVAGATGKVGSRTVR-----ELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL 151 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~-----~L~~~G----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl 151 (446)
...++-+++|+|++.|.. ++-+.+ |+|++++|.+.+. ++.+-+.|.
T Consensus 13 r~a~~~~~~g~i~~nl~~~~~~~H~t~~~~a~~h~vtv~sR~pg~~-------------------------ritw~el~~ 67 (315)
T KOG3019|consen 13 RDAVSNWSNGIIRENLGSETSCCHDTNVHSADNHAVTVLSRSPGKA-------------------------RITWPELDF 67 (315)
T ss_pred ccCCCCccccchhccccCcccccccCCCCcccccceEEEecCCCCc-------------------------ccccchhcC
Confidence 457788899999988876 444444 8999999998653 344433333
Q ss_pred CChhcHHHHhcCCCEEEEcccCCC-CccCCCCCccc-----chHHHHHHHHHHHHhC--CCCEEEEEccccccCCC----
Q 013273 152 EKRVQIEPALGNASVVICCIGASE-KEVFDITGPYR-----IDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG---- 219 (446)
Q Consensus 152 ~d~~~~~~a~~~~D~VI~~Ag~~~-~~~~~~~~~~~-----vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~---- 219 (446)
.-.. ..|++++|.+|-.. .....|...|+ ..+..+..|+++..++ -.+.+|++|..+++.+.
T Consensus 68 ~Gip------~sc~a~vna~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~e 141 (315)
T KOG3019|consen 68 PGIP------ISCVAGVNAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQE 141 (315)
T ss_pred CCCc------eehHHHHhhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccc
Confidence 2211 13444555444210 01112222222 3345578888988776 34579999987764432
Q ss_pred -CchhhhchhhHH--HHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceee--cc-----cCcccCCccCHHHHH
Q 013273 220 -FPAAILNLFWGV--LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITL--SQ-----EDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 -~~~~~~~~~~~Y--~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~--~~-----~~~~~~~~v~~~DvA 289 (446)
.++.....+... ...||......-....++++||.|.|.|.+......+.+.+ +. .+..+..|||++|++
T Consensus 142 Y~e~~~~qgfd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~~~M~lpF~~g~GGPlGsG~Q~fpWIHv~DL~ 221 (315)
T KOG3019|consen 142 YSEKIVHQGFDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGALAMMILPFQMGAGGPLGSGQQWFPWIHVDDLV 221 (315)
T ss_pred cccccccCChHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcchhhhhhhhhhccCCcCCCCCeeeeeeehHHHH
Confidence 222222222222 12233333333345689999999999998654332222221 11 233455789999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
..|.++++++. ..+++|-+.++.++..|+++.+...+++..-
T Consensus 222 ~li~~ale~~~--v~GViNgvAP~~~~n~Ef~q~lg~aL~Rp~~ 263 (315)
T KOG3019|consen 222 NLIYEALENPS--VKGVINGVAPNPVRNGEFCQQLGSALSRPSW 263 (315)
T ss_pred HHHHHHHhcCC--CCceecccCCCccchHHHHHHHHHHhCCCcc
Confidence 99999999985 4789999999999999999999999998753
|
|
| >KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.8e-10 Score=106.23 Aligned_cols=194 Identities=15% Similarity=0.129 Sum_probs=127.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc--------C
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC--------D 150 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~--------D 150 (446)
..+.+||||++.+||..++..+...+.+.....++....+ .+++.+..+ |
T Consensus 5 ~r~villTGaSrgiG~~~v~~i~aed~e~~r~g~~r~~a~----------------------~~~L~v~~gd~~v~~~g~ 62 (253)
T KOG1204|consen 5 MRKVILLTGASRGIGTGSVATILAEDDEALRYGVARLLAE----------------------LEGLKVAYGDDFVHVVGD 62 (253)
T ss_pred cceEEEEecCCCCccHHHHHHHHhcchHHHHHhhhccccc----------------------ccceEEEecCCcceechH
Confidence 4568999999999999999999988865444333322111 133444444 4
Q ss_pred CCChhcHHHHh-------cCCCEEEEcccCCC---------CccCCCCCcccchHHHHHHHHHHHHhC--C---CCEEEE
Q 013273 151 LEKRVQIEPAL-------GNASVVICCIGASE---------KEVFDITGPYRIDFQATKNLVDAATIA--K---VNHFIM 209 (446)
Q Consensus 151 l~d~~~~~~a~-------~~~D~VI~~Ag~~~---------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~---v~r~V~ 209 (446)
+++...+...+ +..|.||||||... .+..+|..+|++|+.....|...+... + .+-+|+
T Consensus 63 ~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVn 142 (253)
T KOG1204|consen 63 ITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVN 142 (253)
T ss_pred HHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEE
Confidence 44333233322 34699999999532 233456778999999998888877543 2 367999
Q ss_pred EccccccCCCCchhhhchhhHHHHHHHHHHHHHH-----hC-CCCEEEEecCCccCCCcccccccc------eeecccCc
Q 013273 210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-----AS-GLPYTIVRPGGMERPTDAYKETHN------ITLSQEDT 277 (446)
Q Consensus 210 vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-----~~-gl~~tivRPg~v~gp~~~~~~~~~------~~~~~~~~ 277 (446)
+||.....+ ...|..|+.+|++.+.+.+ ++ ++++..++||.|-+.......... +.......
T Consensus 143 vSS~aav~p------~~~wa~yc~~KaAr~m~f~~lA~EEp~~v~vl~~aPGvvDT~mq~~ir~~~~~~p~~l~~f~el~ 216 (253)
T KOG1204|consen 143 VSSLAAVRP------FSSWAAYCSSKAARNMYFMVLASEEPFDVRVLNYAPGVVDTQMQVCIRETSRMTPADLKMFKELK 216 (253)
T ss_pred ecchhhhcc------ccHHHHhhhhHHHHHHHHHHHhhcCccceeEEEccCCcccchhHHHHhhccCCCHHHHHHHHHHH
Confidence 999876554 4677889999999998876 34 899999999999876432111111 00011112
Q ss_pred ccCCccCHHHHHHHHHHHHhCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
..+..+...+-|..+..++++..
T Consensus 217 ~~~~ll~~~~~a~~l~~L~e~~~ 239 (253)
T KOG1204|consen 217 ESGQLLDPQVTAKVLAKLLEKGD 239 (253)
T ss_pred hcCCcCChhhHHHHHHHHHHhcC
Confidence 23456888888999988888763
|
|
| >KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.00 E-value=4e-09 Score=98.54 Aligned_cols=172 Identities=14% Similarity=0.111 Sum_probs=124.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.|.++|||++++||.+||.+|++.. ..+.+.+|+.++++++...+++. .....-+++++..|++|.
T Consensus 3 RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f---------~p~~~i~~~yvlvD~sNm 73 (341)
T KOG1478|consen 3 RKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAF---------HPKSTIEVTYVLVDVSNM 73 (341)
T ss_pred ceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHh---------CCCceeEEEEEEEehhhH
Confidence 4689999999999999999999875 35777899999999988877654 222235799999999998
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCCc---------------------------------cCCCCCcccchHHHHHH
Q 013273 155 VQIEPAL-------GNASVVICCIGASEKE---------------------------------VFDITGPYRIDFQATKN 194 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~~---------------------------------~~~~~~~~~vNv~g~~~ 194 (446)
.++..+. ...|.|+-|||....+ ..+-...|+.||.|..-
T Consensus 74 ~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~lg~iFetnVFGhfy 153 (341)
T KOG1478|consen 74 QSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGLGEIFETNVFGHFY 153 (341)
T ss_pred HHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccchhhHhhhcccchhh
Confidence 7776664 5689999999964321 12233458889999998
Q ss_pred HHHHHHhC----CCCEEEEEccccccCCCC--ch-hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCC
Q 013273 195 LVDAATIA----KVNHFIMVSSLGTNKFGF--PA-AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 195 l~~aa~~~----~v~r~V~vSS~~~~~~~~--~~-~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp 260 (446)
+++..... +...+|++||..+..... ++ .......+|..||+..+-+-- ..|+.-.++.||.....
T Consensus 154 li~~l~pll~~~~~~~lvwtSS~~a~kk~lsleD~q~~kg~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 154 LIRELEPLLCHSDNPQLVWTSSRMARKKNLSLEDFQHSKGKEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred hHhhhhhHhhcCCCCeEEEEeecccccccCCHHHHhhhcCCCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 88877542 334899999977644321 11 112334469999998875421 25777788899887654
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=6.7e-09 Score=103.26 Aligned_cols=167 Identities=15% Similarity=0.029 Sum_probs=110.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.++++|+|+|++|.||..++..|+.+| .++++++++...... .++.. .. . .+...+.+|..
T Consensus 6 ~~~~KI~IiGaaG~VGs~~a~~l~~~~~~~elvL~Di~~~~g~a--~Dl~~-----------~~--~--~~~v~~~td~~ 68 (321)
T PTZ00325 6 LKMFKVAVLGAAGGIGQPLSLLLKQNPHVSELSLYDIVGAPGVA--ADLSH-----------ID--T--PAKVTGYADGE 68 (321)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEecCCCcccc--cchhh-----------cC--c--CceEEEecCCC
Confidence 456799999999999999999999666 689999983322111 11111 00 1 23345666766
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC--C-----chhhhchh
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--F-----PAAILNLF 228 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~--~-----~~~~~~~~ 228 (446)
++.+++.++|+||+++|.......+....+..|+..+.++++++++++++++|+++|..++... . ......+.
T Consensus 69 ~~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~~~~~iviv~SNPvdv~~~~~~~~~~~~sg~p~~ 148 (321)
T PTZ00325 69 LWEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASSAPKAIVGIVSNPVNSTVPIAAETLKKAGVYDPR 148 (321)
T ss_pred chHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecCcHHHHHHHHHhhhhhccCCChh
Confidence 6788999999999999986544444556688899999999999999999999999996552211 0 11111222
Q ss_pred hHHHHHHHH---HHHHH-HhCCCCEEEEecCCccCCCc
Q 013273 229 WGVLLWKRK---AEEAL-IASGLPYTIVRPGGMERPTD 262 (446)
Q Consensus 229 ~~Y~~sK~~---~E~~l-~~~gl~~tivRPg~v~gp~~ 262 (446)
..||.+-+. ...++ +..++...-|+ ++|+|.+.
T Consensus 149 ~viG~g~LDs~R~r~~la~~l~v~~~~V~-~~VlGeHG 185 (321)
T PTZ00325 149 KLFGVTTLDVVRARKFVAEALGMNPYDVN-VPVVGGHS 185 (321)
T ss_pred heeechhHHHHHHHHHHHHHhCcChhheE-EEEEeecC
Confidence 334443111 11222 24678777777 88888753
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.87 E-value=1.1e-08 Score=103.18 Aligned_cols=98 Identities=19% Similarity=0.209 Sum_probs=81.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
||+|||.|+ |+||+.+++.|+++| .+|++.+|+.++..++.... .++++.++.|+.|.+.+.
T Consensus 1 m~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~----------------~~~v~~~~vD~~d~~al~ 63 (389)
T COG1748 1 MMKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELI----------------GGKVEALQVDAADVDALV 63 (389)
T ss_pred CCcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhc----------------cccceeEEecccChHHHH
Confidence 478999997 999999999999999 99999999998877654321 148999999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+++.+.|+|||++.... ..+++++|.++|+ ++|=+|
T Consensus 64 ~li~~~d~VIn~~p~~~----------------~~~i~ka~i~~gv-~yvDts 99 (389)
T COG1748 64 ALIKDFDLVINAAPPFV----------------DLTILKACIKTGV-DYVDTS 99 (389)
T ss_pred HHHhcCCEEEEeCCchh----------------hHHHHHHHHHhCC-CEEEcc
Confidence 99999999999987532 3367778888877 555544
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=98.81 E-value=1.9e-07 Score=86.46 Aligned_cols=217 Identities=13% Similarity=0.145 Sum_probs=135.7
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+|++||+|- ..-|+..|++.|.++|.++.....++ ++. ++++.+. ...+.-.+++||++|.+
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~~~GAeL~fTy~~e-~l~---krv~~la----------~~~~s~~v~~cDV~~d~ 69 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALAEQGAELAFTYQGE-RLE---KRVEELA----------EELGSDLVLPCDVTNDE 69 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHHHcCCEEEEEeccH-HHH---HHHHHHH----------hhccCCeEEecCCCCHH
Confidence 57889999986 46799999999999999999888776 322 2222220 00133567899999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCCcc----------CCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~~~----------~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
+++++| +++|.|||+.|....+. +.+...+++-......++++++.. +...+|-++=.+..
T Consensus 70 ~i~~~f~~i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM~~ggSiltLtYlgs~ 149 (259)
T COG0623 70 SIDALFATIKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLMNNGGSILTLTYLGSE 149 (259)
T ss_pred HHHHHHHHHHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhcCCCCcEEEEEeccce
Confidence 888887 56899999999654321 112222333344445556666542 33466666654442
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcc-cc-cccceeecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA-YK-ETHNITLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~-~~-~~~~~~~~~~~~~~~~~v~~~D 287 (446)
.. ....+..+..|...|.-+| ..|++++.|--|.+-+--.. .. ....+.........+..+..+|
T Consensus 150 r~------vPnYNvMGvAKAaLEasvRyLA~dlG~~gIRVNaISAGPIrTLAasgI~~f~~~l~~~e~~aPl~r~vt~ee 223 (259)
T COG0623 150 RV------VPNYNVMGVAKAALEASVRYLAADLGKEGIRVNAISAGPIRTLAASGIGDFRKMLKENEANAPLRRNVTIEE 223 (259)
T ss_pred ee------cCCCchhHHHHHHHHHHHHHHHHHhCccCeEEeeecccchHHHHhhccccHHHHHHHHHhhCCccCCCCHHH
Confidence 21 1222356789999997665 36899999888877321000 00 0111111222333456689999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+...++|+.+=. ..-|+++++-++-.
T Consensus 224 VG~tA~fLlSdLssgiTGei~yVD~G~~ 251 (259)
T COG0623 224 VGNTAAFLLSDLSSGITGEIIYVDSGYH 251 (259)
T ss_pred hhhhHHHHhcchhcccccceEEEcCCce
Confidence 9999999998632 24578887766643
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.3e-07 Score=95.22 Aligned_cols=164 Identities=12% Similarity=0.074 Sum_probs=100.9
Q ss_pred CCCCEEEEECCCcHHHHH--HHHHHHHCCCeEEEEEcCchhHH------------HHHHHHHHhhhcccccccCCCCCCc
Q 013273 78 KDDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEM 143 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~--lv~~L~~~G~~V~~~~R~~~~~~------------~l~~~~~~~~l~~~~~~~g~~~~~~ 143 (446)
..+|++|||||++++|.+ +++.| +.|++|+++++..+... .+.+.++.. | ..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~---------G----~~ 104 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAA---------G----LY 104 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhc---------C----Cc
Confidence 456899999999999999 89999 99999999886432211 122222211 1 34
Q ss_pred eEEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCCccCC---------------CC-C----------------c
Q 013273 144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD---------------IT-G----------------P 184 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~~~~~---------------~~-~----------------~ 184 (446)
+..+.+|+++.+++++++ +++|+||||+|.......+ .. . .
T Consensus 105 a~~i~~DVss~E~v~~lie~I~e~~G~IDiLVnSaA~~~r~~p~~g~~~~s~lKpi~~~~~~~~~d~~~~~i~~~s~~~~ 184 (398)
T PRK13656 105 AKSINGDAFSDEIKQKVIELIKQDLGQVDLVVYSLASPRRTDPKTGEVYRSVLKPIGEPYTGKTLDTDKDVIIEVTVEPA 184 (398)
T ss_pred eEEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEECCccCCCCCcccCceeecccccccccccCCcccccccceeEEEEeeC
Confidence 678899999988877765 5789999999965321100 00 0 0
Q ss_pred ------ccchHHHHHHH---HHHHHhCC----CCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHH-------
Q 013273 185 ------YRIDFQATKNL---VDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI------- 243 (446)
Q Consensus 185 ------~~vNv~g~~~l---~~aa~~~~----v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~------- 243 (446)
.-+++.|.... +++....+ ..++|-+|..+..... .... ...+..|...|...+
T Consensus 185 ~~~ei~~Tv~vMggedw~~Wi~al~~a~lla~g~~~va~TY~G~~~t~-----p~Y~~g~mG~AKa~LE~~~r~La~~L~ 259 (398)
T PRK13656 185 TEEEIADTVKVMGGEDWELWIDALDEAGVLAEGAKTVAYSYIGPELTH-----PIYWDGTIGKAKKDLDRTALALNEKLA 259 (398)
T ss_pred CHHHHHHHHHhhccchHHHHHHHHHhcccccCCcEEEEEecCCcceee-----cccCCchHHHHHHHHHHHHHHHHHHhh
Confidence 00122222111 22332221 2377777776652211 0111 146889999997765
Q ss_pred hCCCCEEEEecCCccCC
Q 013273 244 ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 244 ~~gl~~tivRPg~v~gp 260 (446)
..|++++++-.|.+-+.
T Consensus 260 ~~giran~i~~g~~~T~ 276 (398)
T PRK13656 260 AKGGDAYVSVLKAVVTQ 276 (398)
T ss_pred hcCCEEEEEecCcccch
Confidence 36899999988887654
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.76 E-value=8.8e-08 Score=95.77 Aligned_cols=164 Identities=15% Similarity=0.066 Sum_probs=101.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL 151 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-------~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl 151 (446)
.+|+||||+|+||++++..|+..+ ++|+++++++.. +....-++. .-......|+
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~Dl~----------------d~~~~~~~~~ 66 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVMELQ----------------DCAFPLLKSV 66 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeeehh----------------hccccccCCc
Confidence 479999999999999999999854 589999996532 211000000 0000112355
Q ss_pred CChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEcccc-c-------cCCCCc
Q 013273 152 EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLG-T-------NKFGFP 221 (446)
Q Consensus 152 ~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vSS~~-~-------~~~~~~ 221 (446)
....++.+.++++|+|||+||.......+....++.|+.....+++..+++. .. .+|.+|.-. + ...+.+
T Consensus 67 ~~~~~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~~~~~~ 146 (325)
T cd01336 67 VATTDPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKYAKKNVKVLVVGNPANTNALILLKYAPSIP 146 (325)
T ss_pred eecCCHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEecCcHHHHHHHHHHHcCCCC
Confidence 5456778889999999999998665444456678889999999998888773 23 455555410 0 000111
Q ss_pred hhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCC
Q 013273 222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT 261 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~ 261 (446)
... -....+.-+.+.-..+.+..+++..-|+-..|+|.+
T Consensus 147 ~~~-ig~gt~LDs~R~r~~la~~l~v~~~~v~~~~V~GeH 185 (325)
T cd01336 147 KEN-FTALTRLDHNRAKSQIALKLGVPVSDVKNVIIWGNH 185 (325)
T ss_pred HHH-EEeeehHHHHHHHHHHHHHhCcChhhceEeEEEEcC
Confidence 111 111124444444444455578877777766677764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.71 E-value=4.9e-08 Score=97.17 Aligned_cols=163 Identities=16% Similarity=-0.015 Sum_probs=106.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|+|++|.||..++..|+.+| .+++++++++.....+ ++.. ........++.+.+++.
T Consensus 19 ~KV~IiGaaG~VG~~~a~~l~~~~~~~el~L~Di~~~~g~a~--Dl~~---------------~~~~~~i~~~~~~~d~~ 81 (323)
T PLN00106 19 FKVAVLGAAGGIGQPLSLLMKMNPLVSELHLYDIANTPGVAA--DVSH---------------INTPAQVRGFLGDDQLG 81 (323)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCEEEEEecCCCCeeEc--hhhh---------------CCcCceEEEEeCCCCHH
Confidence 589999999999999999999776 4899999877211110 1111 01111233544556688
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-------CchhhhchhhHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------FPAAILNLFWGV 231 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-------~~~~~~~~~~~Y 231 (446)
+++.++|+|||+||.......+....+..|+..+.++++.+++++.+++|+++|-=++... .......+...|
T Consensus 82 ~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~~p~aivivvSNPvD~~~~i~t~~~~~~s~~p~~~vi 161 (323)
T PLN00106 82 DALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKHCPNALVNIISNPVNSTVPIAAEVLKKAGVYDPKKLF 161 (323)
T ss_pred HHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCCCccccHHHHHHHHHHcCCCCcceEE
Confidence 9999999999999986654455666778899999999999999999999999884432100 000111223335
Q ss_pred HHHHHHHHHHH----HhCCCCEEEEecCCccCCC
Q 013273 232 LLWKRKAEEAL----IASGLPYTIVRPGGMERPT 261 (446)
Q Consensus 232 ~~sK~~~E~~l----~~~gl~~tivRPg~v~gp~ 261 (446)
|.+++..+++- +..|+...-| -++|+|.+
T Consensus 162 G~~~LDs~Rl~~~lA~~lgv~~~~V-~~~ViGeH 194 (323)
T PLN00106 162 GVTTLDVVRANTFVAEKKGLDPADV-DVPVVGGH 194 (323)
T ss_pred EEecchHHHHHHHHHHHhCCChhhe-EEEEEEeC
Confidence 55554444332 2467776666 34666654
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=98.65 E-value=1.2e-07 Score=97.13 Aligned_cols=94 Identities=31% Similarity=0.451 Sum_probs=71.1
Q ss_pred EEEECCCcHHHHHHHHHHHHCC-C-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 83 AFVAGATGKVGSRTVRELLKLG-F-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G-~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|| |++|+.+++.|++++ + +|++.+|+.++++.+.+.+ ...++.++..|+.|.+++.++
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~---------------~~~~~~~~~~d~~~~~~l~~~ 64 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKL---------------LGDRVEAVQVDVNDPESLAEL 64 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT-----------------TTTTEEEEE--TTTHHHHHHH
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhc---------------cccceeEEEEecCCHHHHHHH
Confidence 799999 999999999999987 4 8999999999888765432 126899999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
++++|+||||+|... ...++++|.++|+ ++|-
T Consensus 65 ~~~~dvVin~~gp~~----------------~~~v~~~~i~~g~-~yvD 96 (386)
T PF03435_consen 65 LRGCDVVINCAGPFF----------------GEPVARACIEAGV-HYVD 96 (386)
T ss_dssp HTTSSEEEE-SSGGG----------------HHHHHHHHHHHT--EEEE
T ss_pred HhcCCEEEECCccch----------------hHHHHHHHHHhCC-Ceec
Confidence 999999999998641 3356666666665 5555
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=98.64 E-value=2e-07 Score=86.34 Aligned_cols=83 Identities=25% Similarity=0.240 Sum_probs=68.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++|+||+|++|+.+++.|++.|++|++++|+.++.+.+.+.+... .+..+..+|+.|.+++
T Consensus 26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~--------------~~~~~~~~~~~~~~~~ 91 (194)
T cd01078 26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRAR--------------FGEGVGAVETSDDAAR 91 (194)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhh--------------cCCcEEEeeCCCHHHH
Confidence 45679999999999999999999999999999999988877766554321 2345666788898889
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+++.++|+||++....
T Consensus 92 ~~~~~~~diVi~at~~g 108 (194)
T cd01078 92 AAAIKGADVVFAAGAAG 108 (194)
T ss_pred HHHHhcCCEEEECCCCC
Confidence 99999999999986543
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK06732 phosphopantothenate--cysteine ligase; Validated | Back alignment and domain information |
|---|
Probab=98.52 E-value=5e-06 Score=79.06 Aligned_cols=74 Identities=19% Similarity=0.293 Sum_probs=52.5
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~~~~~ 159 (446)
+++=-.+|||+|++|+++|+++|++|+++.|...... ....+++++.++..+ .+.+.+
T Consensus 18 R~itN~SSG~iG~aLA~~L~~~G~~V~li~r~~~~~~--------------------~~~~~v~~i~v~s~~~m~~~l~~ 77 (229)
T PRK06732 18 RGITNHSTGQLGKIIAETFLAAGHEVTLVTTKTAVKP--------------------EPHPNLSIIEIENVDDLLETLEP 77 (229)
T ss_pred eeecCccchHHHHHHHHHHHhCCCEEEEEECcccccC--------------------CCCCCeEEEEEecHHHHHHHHHH
Confidence 3433467899999999999999999999998642100 011456776654432 245666
Q ss_pred HhcCCCEEEEcccCCC
Q 013273 160 ALGNASVVICCIGASE 175 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~ 175 (446)
.++++|+||||||..+
T Consensus 78 ~~~~~DivIh~AAvsd 93 (229)
T PRK06732 78 LVKDHDVLIHSMAVSD 93 (229)
T ss_pred HhcCCCEEEeCCccCC
Confidence 7788999999999754
|
|
| >PRK05086 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=6.2e-07 Score=89.22 Aligned_cols=115 Identities=19% Similarity=0.176 Sum_probs=80.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHH-C--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLK-L--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~-~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+|+|+||+|.||++++..|.. . ++++++++|++.. ....-.+. . .+....+.+ .+.+++
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~~~~~~el~L~d~~~~~-~g~alDl~-----------~---~~~~~~i~~--~~~~d~ 63 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQLPAGSELSLYDIAPVT-PGVAVDLS-----------H---IPTAVKIKG--FSGEDP 63 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCCccEEEEEecCCCC-cceehhhh-----------c---CCCCceEEE--eCCCCH
Confidence 5899999999999999998865 2 4688888987542 11000110 0 011122233 223456
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+.+.++|+||.++|.......+....+..|.....++++++++++.+++|.+.|
T Consensus 64 ~~~l~~~DiVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~~~~~ivivvs 118 (312)
T PRK05086 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKTCPKACIGIIT 118 (312)
T ss_pred HHHcCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 6778899999999997554444445567789999999999999999999998887
|
|
| >KOG2733 consensus Uncharacterized membrane protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.47 E-value=5.3e-07 Score=88.34 Aligned_cols=84 Identities=17% Similarity=0.294 Sum_probs=70.0
Q ss_pred EEEEECCCcHHHHHHHHHHHH----CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 82 LAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~----~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
-++|.||+||.|.++++++++ .|...-+..|++.++++..+.+.+. .........++.+|..|++++
T Consensus 7 DvVIyGASGfTG~yivee~v~~~~~~~~slavAGRn~~KL~~vL~~~~~k---------~~~~ls~~~i~i~D~~n~~Sl 77 (423)
T KOG2733|consen 7 DVVIYGASGFTGKYIVEEAVSSQVFEGLSLAVAGRNEKKLQEVLEKVGEK---------TGTDLSSSVILIADSANEASL 77 (423)
T ss_pred eEEEEccccccceeeHHHHhhhhcccCceEEEecCCHHHHHHHHHHHhhc---------cCCCcccceEEEecCCCHHHH
Confidence 489999999999999999999 6889999999999998876655432 112223344889999999999
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+....+.+||||+|..
T Consensus 78 ~emak~~~vivN~vGPy 94 (423)
T KOG2733|consen 78 DEMAKQARVIVNCVGPY 94 (423)
T ss_pred HHHHhhhEEEEeccccc
Confidence 99999999999999964
|
|
| >PRK09620 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=8e-07 Score=84.41 Aligned_cols=185 Identities=12% Similarity=0.049 Sum_probs=101.7
Q ss_pred CCCEEEEECCC----------------cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCC
Q 013273 79 DDNLAFVAGAT----------------GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142 (446)
Q Consensus 79 ~~~~VlVtGat----------------G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~ 142 (446)
.+++||||+|. ||+|++|+++|+++|++|+++++....... .....-
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~~~Ga~V~li~g~~~~~~~-----------------~~~~~~ 64 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELISKGAHVIYLHGYFAEKPN-----------------DINNQL 64 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHHHCCCeEEEEeCCCcCCCc-----------------ccCCce
Confidence 46789999885 999999999999999999999864321100 000012
Q ss_pred ceEEEEcCCCChhcHHHHhc--CCCEEEEcccCCCCccCCC----------------CCcccchHHHHHHHHHHHHhCCC
Q 013273 143 MLELVECDLEKRVQIEPALG--NASVVICCIGASEKEVFDI----------------TGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 143 ~v~~v~~Dl~d~~~~~~a~~--~~D~VI~~Ag~~~~~~~~~----------------~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
.+..+.+|....+.+.+++. ++|+|||+|+..+...... ...+.+.+.-+-.++..+++...
T Consensus 65 ~~~~V~s~~d~~~~l~~~~~~~~~D~VIH~AAvsD~~~~~~~~~~~~~~~~~~Ki~~~~~~~l~L~~~pdIl~~l~~~~~ 144 (229)
T PRK09620 65 ELHPFEGIIDLQDKMKSIITHEKVDAVIMAAAGSDWVVDKICDQEGNVLDMNGKISSDIAPIIHFQKAPKVLKQIKQWDP 144 (229)
T ss_pred eEEEEecHHHHHHHHHHHhcccCCCEEEECccccceecccccccccccccccCCCcCCCCCeEEEEECcHHHHHHHhhCC
Confidence 34456664444467778884 6899999999765433210 01122333444456666654332
Q ss_pred CEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecC-CccCCCcccccccceeecccCcccCCcc
Q 013273 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG-GMERPTDAYKETHNITLSQEDTLFGGQV 283 (446)
Q Consensus 205 ~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg-~v~gp~~~~~~~~~~~~~~~~~~~~~~v 283 (446)
+. +.++-..- . +.. +-.-...+...|++.++++++.-.- ..||... ..+.+....... ...
T Consensus 145 ~~-~~vGFkaE-t-~~~---------~~~l~~~A~~kl~~k~~D~ivaN~~~~~~g~~~-----~~~ii~~~~~~~-~~~ 206 (229)
T PRK09620 145 ET-VLVGFKLE-S-DVN---------EEELFERAKNRMEEAKASVMIANSPHSLYSRGA-----MHYVIGQDGKGQ-LCN 206 (229)
T ss_pred CC-EEEEEEec-c-CCC---------HHHHHHHHHHHHHHcCCCEEEECCcccccCCCc-----EEEEEeCCCccc-cCC
Confidence 22 22332111 0 100 0011123334466789998877642 2333321 123333332222 346
Q ss_pred CHHHHHHHHHHHHhC
Q 013273 284 SNLQVAELLACMAKN 298 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~ 298 (446)
+-.++|..|+..+.+
T Consensus 207 ~K~~iA~~i~~~i~~ 221 (229)
T PRK09620 207 GKDETAKEIVKRLEV 221 (229)
T ss_pred CHHHHHHHHHHHHHH
Confidence 778899988887654
|
|
| >PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis [] | Back alignment and domain information |
|---|
Probab=98.34 E-value=4.1e-06 Score=73.58 Aligned_cols=115 Identities=17% Similarity=0.122 Sum_probs=82.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|++|.+|.+++..|+..+ .++++++++++++.....+++..... ......+... ..
T Consensus 1 ~KV~IiGa~G~VG~~~a~~l~~~~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~---------~~~~~~i~~~-------~~ 64 (141)
T PF00056_consen 1 MKVAIIGAAGNVGSTLALLLAQQGLADEIVLIDINEDKAEGEALDLSHASAP---------LPSPVRITSG-------DY 64 (141)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHHHHHG---------STEEEEEEES-------SG
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCceEEeccCcccceeeehhhhhhhhh---------cccccccccc-------cc
Confidence 589999999999999999999987 68999999988877766666544111 0012333322 24
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+.++++|+||.++|.......+....++.|......+++...+.+-. .||.+|
T Consensus 65 ~~~~~aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~~p~~~vivvt 118 (141)
T PF00056_consen 65 EALKDADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKYAPDAIVIVVT 118 (141)
T ss_dssp GGGTTESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHHSTTSEEEE-S
T ss_pred cccccccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHhCCccEEEEeC
Confidence 45789999999999765544444555778999999999999887644 444444
|
L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.4e-06 Score=83.11 Aligned_cols=82 Identities=16% Similarity=0.141 Sum_probs=65.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCc---hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~---~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
.++++++|+|| |++|++++..|++.|++ |+++.|+. ++.+++.+++... ...+.+..+|+.+
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~-------------~~~~~~~~~d~~~ 189 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQE-------------VPECIVNVYDLND 189 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhc-------------CCCceeEEechhh
Confidence 35678999998 89999999999999986 99999997 5666665544321 1345667789988
Q ss_pred hhcHHHHhcCCCEEEEcccC
Q 013273 154 RVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~ 173 (446)
.+++.+.+..+|+||||-..
T Consensus 190 ~~~~~~~~~~~DilINaTp~ 209 (289)
T PRK12548 190 TEKLKAEIASSDILVNATLV 209 (289)
T ss_pred hhHHHhhhccCCEEEEeCCC
Confidence 88888888899999999754
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=98.30 E-value=3.2e-06 Score=81.53 Aligned_cols=95 Identities=11% Similarity=0.051 Sum_probs=71.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||+||||. |+.|++.|.+.|++|++.+|+......+.+ .+...+..+..|.+++.+.
T Consensus 1 m~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~-------------------~g~~~v~~g~l~~~~l~~~ 60 (256)
T TIGR00715 1 MTVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPI-------------------HQALTVHTGALDPQELREF 60 (256)
T ss_pred CeEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccc-------------------cCCceEEECCCCHHHHHHH
Confidence 57999999999 999999999999999999998865433211 1223444566777778888
Q ss_pred hc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEE
Q 013273 161 LG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI 208 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V 208 (446)
+. ++|+||+++.... ...+.|+.++|++.|+..+=
T Consensus 61 l~~~~i~~VIDAtHPfA-------------~~is~~a~~a~~~~~ipylR 97 (256)
T TIGR00715 61 LKRHSIDILVDATHPFA-------------AQITTNATAVCKELGIPYVR 97 (256)
T ss_pred HHhcCCCEEEEcCCHHH-------------HHHHHHHHHHHHHhCCcEEE
Confidence 74 5999999976422 34578888999988875333
|
This enzyme was found to be a monomer by gel filtration. |
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=98.28 E-value=1.6e-05 Score=81.52 Aligned_cols=177 Identities=14% Similarity=0.135 Sum_probs=102.9
Q ss_pred CCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 78 ~~~~~VlVtGa----------------tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+.+++|||||| +|++|.+++++|+++|++|++++++.+. .. .
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~~-~~---------------------~ 243 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVNL-PT---------------------P 243 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCccc-cC---------------------C
Confidence 56789999999 8999999999999999999999987531 10 0
Q ss_pred CceEEEEcCCCChhcHHHHh----cCCCEEEEcccCCCCccCCC-C-------CcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 142 EMLELVECDLEKRVQIEPAL----GNASVVICCIGASEKEVFDI-T-------GPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~a~----~~~D~VI~~Ag~~~~~~~~~-~-------~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
.+ +...|+++.+++.+++ +.+|++|||||..+...... . ..+.+.+.-+-.++....+...++-+.
T Consensus 244 ~~--~~~~dv~~~~~~~~~v~~~~~~~DilI~~Aav~d~~~~~~~~~Kikk~~~~~~l~L~~~pdIl~~l~~~~~~~~~~ 321 (399)
T PRK05579 244 AG--VKRIDVESAQEMLDAVLAALPQADIFIMAAAVADYRPATVAEGKIKKGEGELTLELVPNPDILAEVAALKDKRPFV 321 (399)
T ss_pred CC--cEEEccCCHHHHHHHHHHhcCCCCEEEEcccccccccccccccCccCCCCCceEEEEeCcHHHHHHHhccCCCCEE
Confidence 12 3457999877776665 57899999999754432210 0 011223333445666665443222123
Q ss_pred EccccccCCCCchhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecC---CccCCCcccccccceeecccCc-ccCCccCH
Q 013273 210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GMERPTDAYKETHNITLSQEDT-LFGGQVSN 285 (446)
Q Consensus 210 vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg---~v~gp~~~~~~~~~~~~~~~~~-~~~~~v~~ 285 (446)
++-..- .+ + ....+.+-|.+.++++++.-.= .-||... ...+.+...+. ......+=
T Consensus 322 VGFaaE------t~--~-------~~~~A~~kl~~k~~D~ivaN~i~~~~~fg~~~----n~~~ii~~~~~~~~~~~~~K 382 (399)
T PRK05579 322 VGFAAE------TG--D-------VLEYARAKLKRKGLDLIVANDVSAGGGFGSDD----NEVTLIWSDGGEVKLPLMSK 382 (399)
T ss_pred EEEccC------Cc--h-------HHHHHHHHHHHcCCeEEEEecCCcCCCcCCCc----eEEEEEECCCcEEEcCCCCH
Confidence 332111 10 0 0223334456689998877652 1223221 11222322222 12244677
Q ss_pred HHHHHHHHHHHh
Q 013273 286 LQVAELLACMAK 297 (446)
Q Consensus 286 ~DvA~ai~~ll~ 297 (446)
.++|+.|+..+.
T Consensus 383 ~~iA~~i~~~i~ 394 (399)
T PRK05579 383 LELARRLLDEIA 394 (399)
T ss_pred HHHHHHHHHHHH
Confidence 899999988764
|
|
| >cd00704 MDH Malate dehydrogenase | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.7e-06 Score=83.29 Aligned_cols=103 Identities=16% Similarity=0.106 Sum_probs=75.9
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-------~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
+|.|+||+|+||..++..|+..| ++++++++++ +.. +....|+.
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~~~~---------------------------~g~~~Dl~ 54 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAMKAL---------------------------EGVVMELQ 54 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCccCcc---------------------------ceeeeehh
Confidence 69999999999999999999866 2599999876 322 22233333
Q ss_pred Ch-----------hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEc
Q 013273 153 KR-----------VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS 211 (446)
Q Consensus 153 d~-----------~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vS 211 (446)
|. ....+.++++|+|||+||.......+....+..|+...+.++...++.. -. .+|.+|
T Consensus 55 d~~~~~~~~~~i~~~~~~~~~~aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvs 126 (323)
T cd00704 55 DCAFPLLKGVVITTDPEEAFKDVDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKVAKPTVKVLVVG 126 (323)
T ss_pred hhcccccCCcEEecChHHHhCCCCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 32 3456888999999999998665545555567789999999999998873 44 455554
|
Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=98.23 E-value=6.3e-06 Score=82.37 Aligned_cols=105 Identities=16% Similarity=0.100 Sum_probs=76.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+|+|+||+|+||..++..|+..|. ++++++++++. +..+....|+.|.
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~-------------------------~~a~g~~~Dl~d~ 55 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAM-------------------------KVLEGVVMELMDC 55 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCcc-------------------------cccceeEeehhcc
Confidence 489999999999999999998652 69999986542 1122333444443
Q ss_pred h-----------cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEc
Q 013273 155 V-----------QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVS 211 (446)
Q Consensus 155 ~-----------~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vS 211 (446)
. ...+.+.++|+||++||.......+....+..|+...+.+++..+++. -. .+|.+|
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~~~~~~iiivvs 125 (324)
T TIGR01758 56 AFPLLDGVVPTHDPAVAFTDVDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKLAKKDCKVLVVG 125 (324)
T ss_pred cchhcCceeccCChHHHhCCCCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 3 446788999999999998655444456667889999999999998873 43 455555
|
This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=98.21 E-value=4.1e-06 Score=83.64 Aligned_cols=167 Identities=11% Similarity=-0.011 Sum_probs=105.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
.++|.|+|++|+||..++..|+..|. ++++++.+++. +.....++... .... ..++.+.
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~--------~~~~-~~~~~i~--- 69 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIASGEMFGPDQPVILQLLELPQALKALEGVAMELEDC--------AFPL-LAEIVIT--- 69 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEEecCCcccccceeehhhhhc--------cccc-cCceEEe---
Confidence 35899999999999999999998883 79999985432 33322222211 0000 0123222
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC-C-EEEEEcccc-ccCCC-Cchh-hh
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVSSLG-TNKFG-FPAA-IL 225 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v-~-r~V~vSS~~-~~~~~-~~~~-~~ 225 (446)
....+.+.++|+||.+||.......+....+..|+.....+++..++++- . .+|.+|.-. +..+- .... -.
T Consensus 70 ----~~~~~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsNPvD~~t~~~~k~sg~~ 145 (322)
T cd01338 70 ----DDPNVAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGNPCNTNALIAMKNAPDI 145 (322)
T ss_pred ----cCcHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecCcHHHHHHHHHHHcCCC
Confidence 12256688999999999986554444455678899999999999988762 3 555555310 00000 0000 02
Q ss_pred chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCc
Q 013273 226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD 262 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~ 262 (446)
.+...|+.+++..+++-. ..|++...+|..+|||++.
T Consensus 146 p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeHG 186 (322)
T cd01338 146 PPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNHS 186 (322)
T ss_pred ChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCCc
Confidence 233457777777665543 4799999999989999863
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=1.2e-05 Score=80.51 Aligned_cols=73 Identities=25% Similarity=0.286 Sum_probs=56.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-C-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-G-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+++|+||||+|+||+.+++.|+++ | .+|+++.|+..++..+.+++. .+|+.
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~----------------------~~~i~--- 207 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELG----------------------GGKIL--- 207 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhc----------------------cccHH---
Confidence 56789999999999999999999865 5 699999999877766543221 13333
Q ss_pred cHHHHhcCCCEEEEcccCCC
Q 013273 156 QIEPALGNASVVICCIGASE 175 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~ 175 (446)
.+.+++.++|+|||+++...
T Consensus 208 ~l~~~l~~aDiVv~~ts~~~ 227 (340)
T PRK14982 208 SLEEALPEADIVVWVASMPK 227 (340)
T ss_pred hHHHHHccCCEEEECCcCCc
Confidence 36688899999999998754
|
|
| >TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic | Back alignment and domain information |
|---|
Probab=98.10 E-value=4.6e-05 Score=77.94 Aligned_cols=176 Identities=13% Similarity=0.101 Sum_probs=105.8
Q ss_pred CCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 78 ~~~~~VlVtGa----------------tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+.+++|||||| ||.+|.+++++|..+|++|+++.+..... ..
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~~~Ga~V~~~~g~~~~~----------------------~~ 240 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAYKRGADVTLITGPVSLL----------------------TP 240 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHHHCCCEEEEeCCCCccC----------------------CC
Confidence 56789999998 46799999999999999999988765321 00
Q ss_pred CceEEEEcCCCChhcH-HHHh----cCCCEEEEcccCCCCccCC--------CCCcccchHHHHHHHHHHHHhCCCCEEE
Q 013273 142 EMLELVECDLEKRVQI-EPAL----GNASVVICCIGASEKEVFD--------ITGPYRIDFQATKNLVDAATIAKVNHFI 208 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~-~~a~----~~~D~VI~~Ag~~~~~~~~--------~~~~~~vNv~g~~~l~~aa~~~~v~r~V 208 (446)
..+ ...|+.+.+++ +.++ .++|++|||||..+..... ....+.+|+.-+-.+++..++...++ +
T Consensus 241 ~~~--~~~~v~~~~~~~~~~~~~~~~~~D~~i~~Aavsd~~~~~~~~~Ki~~~~~~~~l~L~~~pdil~~l~~~~~~~-~ 317 (390)
T TIGR00521 241 PGV--KSIKVSTAEEMLEAALNELAKDFDIFISAAAVADFKPKTVFEGKIKKQGEELSLKLVKNPDIIAEVRKIKKHQ-V 317 (390)
T ss_pred CCc--EEEEeccHHHHHHHHHHhhcccCCEEEEccccccccccccccccccccCCceeEEEEeCcHHHHHHHhhCCCc-E
Confidence 222 45788887777 4333 5689999999976542211 11224466777777787777543233 3
Q ss_pred EEccccccCCCCchhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCC--ccCCCcccccccceeecccCcccCCccCHH
Q 013273 209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG--MERPTDAYKETHNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 209 ~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~--v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~ 286 (446)
.++-..- .+ +. -...+.+-++++++++++.-.-. -||... ...+.+...+.......+=.
T Consensus 318 lvgF~aE------t~--~~------l~~~A~~kl~~k~~D~ivaN~i~~~~fg~~~----n~~~li~~~~~~~~~~~~K~ 379 (390)
T TIGR00521 318 IVGFKAE------TN--DD------LIKYAKEKLKKKNLDMIVANDVSQRGFGSDE----NEVYIFSKHGHKELPLMSKL 379 (390)
T ss_pred EEEEEcC------CC--cH------HHHHHHHHHHHcCCCEEEEccCCccccCCCC----cEEEEEECCCeEEeCCCCHH
Confidence 3442111 10 00 12334445667899998876532 133322 11222333222233446778
Q ss_pred HHHHHHHHHH
Q 013273 287 QVAELLACMA 296 (446)
Q Consensus 287 DvA~ai~~ll 296 (446)
++|+.|+..+
T Consensus 380 ~iA~~i~~~~ 389 (390)
T TIGR00521 380 EVAERILDEI 389 (390)
T ss_pred HHHHHHHHHh
Confidence 9999988765
|
This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity. |
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=98.06 E-value=2.8e-05 Score=67.76 Aligned_cols=77 Identities=25% Similarity=0.297 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++|.|+ |+.|+.++..|.+.|.+ |+++.|+.++++.+.+.+.. ..+.++. .++
T Consensus 10 l~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~---------------~~~~~~~-----~~~ 68 (135)
T PF01488_consen 10 LKGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGG---------------VNIEAIP-----LED 68 (135)
T ss_dssp GTTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTG---------------CSEEEEE-----GGG
T ss_pred cCCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCc---------------cccceee-----HHH
Confidence 56789999995 99999999999999976 99999999999888775511 3455544 234
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+.+.+..+|+|||+.+...
T Consensus 69 ~~~~~~~~DivI~aT~~~~ 87 (135)
T PF01488_consen 69 LEEALQEADIVINATPSGM 87 (135)
T ss_dssp HCHHHHTESEEEE-SSTTS
T ss_pred HHHHHhhCCeEEEecCCCC
Confidence 5577889999999987643
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >COG3268 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=98.03 E-value=1.5e-05 Score=77.72 Aligned_cols=77 Identities=23% Similarity=0.290 Sum_probs=64.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
...++|-|||||.|..++++|+.+|.+-.+..|+..++..+.+.+ +.++-..++.++..+++
T Consensus 6 e~d~iiYGAtGy~G~lvae~l~~~g~~~aLAgRs~~kl~~l~~~L------------------G~~~~~~p~~~p~~~~~ 67 (382)
T COG3268 6 EYDIIIYGATGYAGGLVAEYLAREGLTAALAGRSSAKLDALRASL------------------GPEAAVFPLGVPAALEA 67 (382)
T ss_pred ceeEEEEccccchhHHHHHHHHHcCCchhhccCCHHHHHHHHHhc------------------CccccccCCCCHHHHHH
Confidence 346999999999999999999999999999999999988876644 23344455666889999
Q ss_pred HhcCCCEEEEcccCC
Q 013273 160 ALGNASVVICCIGAS 174 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~ 174 (446)
.+.+.++|+||+|..
T Consensus 68 ~~~~~~VVlncvGPy 82 (382)
T COG3268 68 MASRTQVVLNCVGPY 82 (382)
T ss_pred HHhcceEEEeccccc
Confidence 999999999999964
|
|
| >cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.96 E-value=9.1e-05 Score=73.60 Aligned_cols=115 Identities=17% Similarity=0.158 Sum_probs=80.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|.|.|+ |++|+.++..|+..| ++|++++|++++...+...+.+.... ......+...| .
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~---------~~~~~~i~~~~------~- 63 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLVNQGIADELVLIDINEEKAEGEALDLEDALAF---------LPSPVKIKAGD------Y- 63 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHhHhhHHHHhhc---------cCCCeEEEcCC------H-
Confidence 37999995 999999999999999 68999999998887776666543100 01223333222 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+.+.++|+||+++|.......+....+..|..-...+++.+++++-. .||.+|.
T Consensus 64 ~~l~~aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~~~~~~vivvsN 118 (306)
T cd05291 64 SDCKDADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKASGFDGIFLVASN 118 (306)
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecC
Confidence 24689999999999765544444455677888889999999887544 4555553
|
L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine |
| >COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.95 E-value=0.0001 Score=69.98 Aligned_cols=75 Identities=25% Similarity=0.323 Sum_probs=63.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++|.| .|.+|+.+++.|.+.|++|+++++++++.....+. ......+.+|-+|.+.++++
T Consensus 1 m~iiIiG-~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~-----------------~~~~~~v~gd~t~~~~L~~a 62 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELSEEGHNVVLIDRDEERVEEFLAD-----------------ELDTHVVIGDATDEDVLEEA 62 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhh-----------------hcceEEEEecCCCHHHHHhc
Confidence 5788999 69999999999999999999999999876652220 14588999999999999998
Q ss_pred -hcCCCEEEEcccC
Q 013273 161 -LGNASVVICCIGA 173 (446)
Q Consensus 161 -~~~~D~VI~~Ag~ 173 (446)
+.++|+||-..|-
T Consensus 63 gi~~aD~vva~t~~ 76 (225)
T COG0569 63 GIDDADAVVAATGN 76 (225)
T ss_pred CCCcCCEEEEeeCC
Confidence 7999999987654
|
|
| >TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.5e-05 Score=75.64 Aligned_cols=69 Identities=13% Similarity=0.164 Sum_probs=48.4
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
+++=-.++|+||++++++|+++|++|++++|... .. . .....+|+.+.+++.+++
T Consensus 17 R~itN~SSGgIG~AIA~~la~~Ga~Vvlv~~~~~-l~-----------------------~-~~~~~~Dv~d~~s~~~l~ 71 (227)
T TIGR02114 17 RSITNHSTGHLGKIITETFLSAGHEVTLVTTKRA-LK-----------------------P-EPHPNLSIREIETTKDLL 71 (227)
T ss_pred eeecCCcccHHHHHHHHHHHHCCCEEEEEcChhh-cc-----------------------c-ccCCcceeecHHHHHHHH
Confidence 3433455999999999999999999999876321 00 0 011347888876666543
Q ss_pred -------cCCCEEEEcccCCC
Q 013273 162 -------GNASVVICCIGASE 175 (446)
Q Consensus 162 -------~~~D~VI~~Ag~~~ 175 (446)
+++|++|||||..+
T Consensus 72 ~~v~~~~g~iDiLVnnAgv~d 92 (227)
T TIGR02114 72 ITLKELVQEHDILIHSMAVSD 92 (227)
T ss_pred HHHHHHcCCCCEEEECCEecc
Confidence 57899999999653
|
In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity. |
| >PRK00066 ldh L-lactate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00023 Score=71.02 Aligned_cols=116 Identities=18% Similarity=0.192 Sum_probs=82.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+++|.|+|+ |.||..++..|+..|. ++++++++.+++.....++.+.. ... .++.+...|
T Consensus 4 ~~~~ki~iiGa-G~vG~~~a~~l~~~~~~~el~L~D~~~~~~~g~~~Dl~~~~---------~~~-~~~~i~~~~----- 67 (315)
T PRK00066 4 KQHNKVVLVGD-GAVGSSYAYALVNQGIADELVIIDINKEKAEGDAMDLSHAV---------PFT-SPTKIYAGD----- 67 (315)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCCchhHHHHHHHHhhc---------ccc-CCeEEEeCC-----
Confidence 45579999997 9999999999999985 89999999888777666655431 011 233333222
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+ +.++++|+||.+||.......+....+..|......+++.+++.+.. .+|.+|
T Consensus 68 -~-~~~~~adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~~~~~~vivvs 122 (315)
T PRK00066 68 -Y-SDCKDADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMASGFDGIFLVAS 122 (315)
T ss_pred -H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 2 34789999999999765544444555777888889988888887544 455544
|
|
| >PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase | Back alignment and domain information |
|---|
Probab=97.87 E-value=5.4e-05 Score=77.29 Aligned_cols=100 Identities=20% Similarity=0.333 Sum_probs=67.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|.|.||||++|+.|++.|.++ +++|+.+.++.+..+.+.. ....+...|+.+.+.+
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~hP~~el~~l~s~~saG~~i~~-------------------~~~~l~~~~~~~~~~~ 97 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLANHPDFEITVMTADRKAGQSFGS-------------------VFPHLITQDLPNLVAV 97 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHhCCCCeEEEEEChhhcCCCchh-------------------hCccccCccccceecC
Confidence 5569999999999999999999998 6899999986543211110 1112233455444444
Q ss_pred HHH-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 158 ~~a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
+.. +.++|+||.+.+.. ...+++.++ +.+ .++|-+|+..-
T Consensus 98 ~~~~~~~~DvVf~Alp~~----------------~s~~i~~~~-~~g-~~VIDlSs~fR 138 (381)
T PLN02968 98 KDADFSDVDAVFCCLPHG----------------TTQEIIKAL-PKD-LKIVDLSADFR 138 (381)
T ss_pred CHHHhcCCCEEEEcCCHH----------------HHHHHHHHH-hCC-CEEEEcCchhc
Confidence 433 68899999987642 366677776 345 48999998654
|
|
| >cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity | Back alignment and domain information |
|---|
Probab=97.84 E-value=5.7e-05 Score=75.15 Aligned_cols=117 Identities=16% Similarity=0.167 Sum_probs=74.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+|.|+|++|.+|..++..|+..|+ +|++++|+. +++......+.+.. - .......+.. . .+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~--------~-~~~~~~~i~~---~--~d 66 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLAKEDVVKEINLISRPKSLEKLKGLRLDIYDAL--------A-AAGIDAEIKI---S--SD 66 (309)
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEECcccccccccccchhhhch--------h-ccCCCcEEEE---C--CC
Confidence 5899999999999999999999985 599999954 33332221111100 0 0001111111 1 12
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
. +.+.++|+||-++|.......+....++.|+.....+++...+.+.. .||.+++
T Consensus 67 ~-~~l~~aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~~~~~~viv~~n 122 (309)
T cd05294 67 L-SDVAGSDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEFAPDTKILVVTN 122 (309)
T ss_pred H-HHhCCCCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 3 34899999999999755433333445677888888888888776433 5666665
|
The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox |
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.84 E-value=8.8e-05 Score=72.67 Aligned_cols=75 Identities=27% Similarity=0.403 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++|+|+ |++|+.++..|++.| .+|+++.|+.++.+.+.+.+... ..+.+ ++ .
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~--------------~~~~~---~~----~ 178 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGAL--------------GKAEL---DL----E 178 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc--------------cceee---cc----c
Confidence 45678999996 999999999999999 79999999998887776544321 11222 11 2
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+.+.++|+|||+....
T Consensus 179 ~~~~~~~~DivInaTp~g 196 (278)
T PRK00258 179 LQEELADFDLIINATSAG 196 (278)
T ss_pred chhccccCCEEEECCcCC
Confidence 345667899999998754
|
|
| >PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00021 Score=74.74 Aligned_cols=76 Identities=20% Similarity=0.208 Sum_probs=56.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++|+|+|+++ +|..+++.|++.|++|++.+++. +......+++.. .++.++.+|..+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l~~---------------~~~~~~~~~~~~--- 63 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLKKLGAKVILTDEKEEDQLKEALEELGE---------------LGIELVLGEYPE--- 63 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHh---------------cCCEEEeCCcch---
Confidence 3568999999766 99999999999999999999975 333222222221 246788888876
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.++++|+||+++|..
T Consensus 64 --~~~~~~d~vv~~~g~~ 79 (450)
T PRK14106 64 --EFLEGVDLVVVSPGVP 79 (450)
T ss_pred --hHhhcCCEEEECCCCC
Confidence 3457899999999863
|
|
| >PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00044 Score=69.62 Aligned_cols=109 Identities=14% Similarity=0.284 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc---------------------hhHHHHHHHHHHhhhcccccc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN 135 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~---------------------~~~~~l~~~~~~~~l~~~~~~ 135 (446)
...++|+|.| .|.+|.++++.|++.|. ++++++++. .|...+.+.++++
T Consensus 22 L~~~~VlIiG-~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~i-------- 92 (338)
T PRK12475 22 IREKHVLIVG-AGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKI-------- 92 (338)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHH--------
Confidence 4567899999 58899999999999996 888888863 3444455555443
Q ss_pred cCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 136 ~g~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+..|++ .+.+++++.++|+||.+.. |...-..+-++|.+.++ .+|+.+..+.
T Consensus 93 ---np~v~i~~~~~~~~-~~~~~~~~~~~DlVid~~D---------------~~~~r~~in~~~~~~~i-p~i~~~~~g~ 152 (338)
T PRK12475 93 ---NSEVEIVPVVTDVT-VEELEELVKEVDLIIDATD---------------NFDTRLLINDLSQKYNI-PWIYGGCVGS 152 (338)
T ss_pred ---CCCcEEEEEeccCC-HHHHHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeccc
Confidence 12245667777875 4567888999999999852 22223345577778886 6777766543
|
|
| >PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.00013 Score=82.52 Aligned_cols=78 Identities=22% Similarity=0.274 Sum_probs=63.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-Ce-------------EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FR-------------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~-------------V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~ 143 (446)
..+++|+|.|+ |+||+.+++.|++.. ++ |.+.+++.+.++++.+. .++
T Consensus 567 ~~~~rIlVLGA-G~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~-----------------~~~ 628 (1042)
T PLN02819 567 KKSQNVLILGA-GRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEG-----------------IEN 628 (1042)
T ss_pred ccCCcEEEECC-CHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHh-----------------cCC
Confidence 34679999995 999999999999863 34 88888888776665432 146
Q ss_pred eEEEEcCCCChhcHHHHhcCCCEEEEcccC
Q 013273 144 LELVECDLEKRVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~ 173 (446)
+..+..|+.|.+++.+++.++|+||++...
T Consensus 629 ~~~v~lDv~D~e~L~~~v~~~DaVIsalP~ 658 (1042)
T PLN02819 629 AEAVQLDVSDSESLLKYVSQVDVVISLLPA 658 (1042)
T ss_pred CceEEeecCCHHHHHHhhcCCCEEEECCCc
Confidence 788999999999999999999999999864
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0005 Score=64.11 Aligned_cols=108 Identities=16% Similarity=0.230 Sum_probs=74.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.++++.|+..|. ++++++++ ..|...+.+.++++
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La~~Gv~~i~lvD~d~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---------- 87 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLAGAGVGTIVIVDDDHVDLSNLQRQILFTEEDVGRPKVEVAAQRLREL---------- 87 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEecCCEEcccchhhhhccChhhCCChHHHHHHHHHHHh----------
Confidence 4567899999 79999999999999995 89999987 23444444554443
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+..++. .+.+.+.+.++|+||.+.. |...-..+-+.|++++. .||+.+..+
T Consensus 88 -np~v~i~~~~~~i~-~~~~~~~~~~~D~Vi~~~d---------------~~~~r~~l~~~~~~~~i-p~i~~~~~g 146 (202)
T TIGR02356 88 -NSDIQVTALKERVT-AENLELLINNVDLVLDCTD---------------NFATRYLINDACVALGT-PLISAAVVG 146 (202)
T ss_pred -CCCCEEEEehhcCC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 11133444444554 3557788899999999853 23334456678888876 688877544
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >PRK05442 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00021 Score=71.52 Aligned_cols=119 Identities=11% Similarity=-0.011 Sum_probs=78.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--C-----eEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--F-----RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~-----~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
..+.+|.|+|++|+||..++..|+..| . ++++++.+++ ++.....++.... ... ..++.+.
T Consensus 2 ~~~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~~~g~a~Dl~~~~--------~~~-~~~~~i~- 71 (326)
T PRK05442 2 KAPVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKALEGVVMELDDCA--------FPL-LAGVVIT- 71 (326)
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccccceeehhhhhhh--------hhh-cCCcEEe-
Confidence 445689999999999999999999877 2 7999998543 2333222222210 000 0122222
Q ss_pred cCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEcc
Q 013273 149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSS 212 (446)
Q Consensus 149 ~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS 212 (446)
....+.+.++|+||-+||.......+....+..|....+.+++..+++. -..+|.+|.
T Consensus 72 ------~~~y~~~~daDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvsN 131 (326)
T PRK05442 72 ------DDPNVAFKDADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEVAARDVKVLVVGN 131 (326)
T ss_pred ------cChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC
Confidence 1234667899999999997665544555567889999999999998843 335666663
|
|
| >PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated | Back alignment and domain information |
|---|
Probab=97.71 E-value=0.00064 Score=68.49 Aligned_cols=109 Identities=17% Similarity=0.288 Sum_probs=76.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc---------------------hhHHHHHHHHHHhhhcccccc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---------------------QRAENLVQSVKQMKLDGELAN 135 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~---------------------~~~~~l~~~~~~~~l~~~~~~ 135 (446)
....+|+|.|+ |+||..++..|++.|. +|++++++. .|...+.+.++++
T Consensus 22 L~~~~VlVvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~i-------- 92 (339)
T PRK07688 22 LREKHVLIIGA-GALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEI-------- 92 (339)
T ss_pred hcCCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHH--------
Confidence 45678999995 9999999999999996 899999863 2334444444433
Q ss_pred cCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 136 KGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 136 ~g~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-.++.+..|++ .+.+.+++.++|+||.+.. |...-..+-++|.+.++ .+|+.+..+.
T Consensus 93 ---np~v~v~~~~~~~~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~ln~~~~~~~i-P~i~~~~~g~ 152 (339)
T PRK07688 93 ---NSDVRVEAIVQDVT-AEELEELVTGVDLIIDATD---------------NFETRFIVNDAAQKYGI-PWIYGACVGS 152 (339)
T ss_pred ---CCCcEEEEEeccCC-HHHHHHHHcCCCEEEEcCC---------------CHHHHHHHHHHHHHhCC-CEEEEeeeee
Confidence 11234666667775 4557778899999999842 33444456678888886 7888776544
|
|
| >PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00093 Score=56.03 Aligned_cols=70 Identities=24% Similarity=0.328 Sum_probs=57.7
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH-h
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA-L 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a-~ 161 (446)
|+|.| .|.+|+.+++.|.+.+++|++++++++....+.+ .++.++.+|.+|.+.++++ +
T Consensus 1 vvI~G-~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~~~-------------------~~~~~i~gd~~~~~~l~~a~i 60 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLKEGGIDVVVIDRDPERVEELRE-------------------EGVEVIYGDATDPEVLERAGI 60 (116)
T ss_dssp EEEES--SHHHHHHHHHHHHTTSEEEEEESSHHHHHHHHH-------------------TTSEEEES-TTSHHHHHHTTG
T ss_pred eEEEc-CCHHHHHHHHHHHhCCCEEEEEECCcHHHHHHHh-------------------cccccccccchhhhHHhhcCc
Confidence 67888 4899999999999977899999999988766543 4588999999999999876 5
Q ss_pred cCCCEEEEccc
Q 013273 162 GNASVVICCIG 172 (446)
Q Consensus 162 ~~~D~VI~~Ag 172 (446)
.+++.||-+..
T Consensus 61 ~~a~~vv~~~~ 71 (116)
T PF02254_consen 61 EKADAVVILTD 71 (116)
T ss_dssp GCESEEEEESS
T ss_pred cccCEEEEccC
Confidence 78999998864
|
The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A .... |
| >PTZ00117 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00022 Score=71.27 Aligned_cols=118 Identities=16% Similarity=0.139 Sum_probs=76.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++|.|+|| |.+|..++..|+..| .+|++++++++......-.+... .........+.. ..++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~~~~~~~l~L~Di~~~~~~g~~lDl~~~---------~~~~~~~~~i~~-----~~d~ 68 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLILQKNLGDVVLYDVIKGVPQGKALDLKHF---------STLVGSNINILG-----TNNY 68 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHHHCCCCeEEEEECCCccchhHHHHHhhh---------ccccCCCeEEEe-----CCCH
Confidence 4568999997 999999999999988 78999999887654322111110 000001122211 1234
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vSS 212 (446)
+ ++.++|+||.++|.......+....+..|......+++.+.+.+.+. +|++|.
T Consensus 69 ~-~l~~ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~~p~a~vivvsN 123 (319)
T PTZ00117 69 E-DIKDSDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKYCPNAFVICVTN 123 (319)
T ss_pred H-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 5 67999999999987654433434455667777788888888775554 666654
|
|
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00043 Score=72.37 Aligned_cols=73 Identities=18% Similarity=0.120 Sum_probs=62.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|.|+ |.+|+++++.|.+.|++|++++|++++...+.+. .++.++.+|.++...++++
T Consensus 1 m~viIiG~-G~ig~~~a~~L~~~g~~v~vid~~~~~~~~~~~~------------------~~~~~~~gd~~~~~~l~~~ 61 (453)
T PRK09496 1 MKIIIVGA-GQVGYTLAENLSGENNDVTVIDTDEERLRRLQDR------------------LDVRTVVGNGSSPDVLREA 61 (453)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHhh------------------cCEEEEEeCCCCHHHHHHc
Confidence 47999996 9999999999999999999999998876654320 3588999999999999888
Q ss_pred -hcCCCEEEEccc
Q 013273 161 -LGNASVVICCIG 172 (446)
Q Consensus 161 -~~~~D~VI~~Ag 172 (446)
+.++|+||.+..
T Consensus 62 ~~~~a~~vi~~~~ 74 (453)
T PRK09496 62 GAEDADLLIAVTD 74 (453)
T ss_pred CCCcCCEEEEecC
Confidence 889999998864
|
|
| >TIGR01759 MalateDH-SF1 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00033 Score=69.99 Aligned_cols=116 Identities=10% Similarity=0.018 Sum_probs=78.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
..+|.|+|++|+||..++..|+..|. ++++++.++ +++......+.... .. ...++.+.
T Consensus 3 p~KV~IIGa~G~VG~~~a~~l~~~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~--------~~-~~~~~~i~--- 70 (323)
T TIGR01759 3 PVRVAVTGAAGQIGYSLLFRIASGELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCA--------FP-LLAGVVAT--- 70 (323)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCcccCCCccEEEEEecCCcccccchHHHHHhhcc--------cc-ccCCcEEe---
Confidence 35899999999999999999998883 799999865 33444333333210 00 00122221
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC-C-EEEEEc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV-N-HFIMVS 211 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v-~-r~V~vS 211 (446)
....+.++++|+||.+||.......+....+..|+.....+++.+++++- . .+|.+|
T Consensus 71 ----~~~~~~~~daDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~~~~~~iiivvs 129 (323)
T TIGR01759 71 ----TDPEEAFKDVDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKVAKKDVKVLVVG 129 (323)
T ss_pred ----cChHHHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEeC
Confidence 12346678999999999986655445555678899999999999988754 4 455554
|
This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms. |
| >cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00023 Score=69.16 Aligned_cols=114 Identities=17% Similarity=0.113 Sum_probs=78.3
Q ss_pred EEEECCCcHHHHHHHHHHHHCC----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 83 AFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|.|+||+|.+|..++..|+..| .+|++++++++++.....+++... .. . ....+. -..++.
T Consensus 1 I~IIGagG~vG~~ia~~l~~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~--------~~-~-~~~~i~-----~~~d~~ 65 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLADGSVLLAIELVLYDIDEEKLKGVAMDLQDAV--------EP-L-ADIKVS-----ITDDPY 65 (263)
T ss_pred CEEECCCChHHHHHHHHHHhCCCCcceEEEEEeCCcccchHHHHHHHHhh--------hh-c-cCcEEE-----ECCchH
Confidence 5799999999999999999998 799999999887777666655431 00 0 011221 123357
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+++.++|+||..+|........-......|+.....+++.+++.+.. .+|.+|
T Consensus 66 ~~~~~aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~~p~a~~i~~t 119 (263)
T cd00650 66 EAFKDADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKYSPDAWIIVVS 119 (263)
T ss_pred HHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 78899999999998765433322333455788888888888877543 455554
|
Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains |
| >PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0016 Score=56.46 Aligned_cols=106 Identities=21% Similarity=0.336 Sum_probs=75.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKGIQ 139 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g~~ 139 (446)
.++|+|.| .|.+|..+++.|+..|. ++++++.+ ..|...+.+.++++ .
T Consensus 2 ~~~v~iiG-~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-----------n 69 (135)
T PF00899_consen 2 NKRVLIIG-AGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEI-----------N 69 (135)
T ss_dssp T-EEEEES-TSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHH-----------S
T ss_pred CCEEEEEC-cCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHh-----------c
Confidence 35899999 69999999999999996 78888863 23445555555544 1
Q ss_pred CCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 140 PVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 140 ~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+.-+++.+..++ +.+.+.+.++++|+||++.. |...-..+.+.|++.+. +||+.+..+
T Consensus 70 p~~~v~~~~~~~-~~~~~~~~~~~~d~vi~~~d---------------~~~~~~~l~~~~~~~~~-p~i~~~~~g 127 (135)
T PF00899_consen 70 PDVEVEAIPEKI-DEENIEELLKDYDIVIDCVD---------------SLAARLLLNEICREYGI-PFIDAGVNG 127 (135)
T ss_dssp TTSEEEEEESHC-SHHHHHHHHHTSSEEEEESS---------------SHHHHHHHHHHHHHTT--EEEEEEEET
T ss_pred Cceeeeeeeccc-ccccccccccCCCEEEEecC---------------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence 224567777777 45667888899999999853 24445567778888886 788877654
|
Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A .... |
| >PRK14874 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00021 Score=71.90 Aligned_cols=93 Identities=25% Similarity=0.233 Sum_probs=61.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++|+|.||||++|+.|++.|.++|| +++.+.|..+..+.+. ..+.++...|+.+.
T Consensus 1 ~~~V~IvGAtG~vG~~l~~lL~~~~hp~~~l~~l~s~~~~g~~l~-------------------~~g~~i~v~d~~~~-- 59 (334)
T PRK14874 1 GYNVAVVGATGAVGREMLNILEERNFPVDKLRLLASARSAGKELS-------------------FKGKELKVEDLTTF-- 59 (334)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCcceEEEEEccccCCCeee-------------------eCCceeEEeeCCHH--
Confidence 36899999999999999999999876 4577877654322210 01234444566432
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.++|+||.++|... +..++..+.+.|+ .+|=.|+.
T Consensus 60 ---~~~~vDvVf~A~g~g~----------------s~~~~~~~~~~G~-~VIDlS~~ 96 (334)
T PRK14874 60 ---DFSGVDIALFSAGGSV----------------SKKYAPKAAAAGA-VVIDNSSA 96 (334)
T ss_pred ---HHcCCCEEEECCChHH----------------HHHHHHHHHhCCC-EEEECCch
Confidence 3468999999987521 4455556666676 66666664
|
|
| >PRK06223 malate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00048 Score=68.37 Aligned_cols=117 Identities=13% Similarity=0.070 Sum_probs=72.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++|.|.|+ |.+|..++..|+..|. +|+++++++++.......+...... ......+. . ..++
T Consensus 2 ~~KI~VIGa-G~vG~~ia~~la~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~---------~~~~~~i~-~----~~d~- 65 (307)
T PRK06223 2 RKKISIIGA-GNVGATLAHLLALKELGDVVLFDIVEGVPQGKALDIAEAAPV---------EGFDTKIT-G----TNDY- 65 (307)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEEECCCchhHHHHHHHHhhhhh---------cCCCcEEE-e----CCCH-
Confidence 468999998 9999999999999875 9999999887665433222221000 00111111 1 1123
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+.+.++|+||.++|.......+....+.-|......+++.+.+...+ .+|.++.
T Consensus 66 ~~~~~aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~~~~~~viv~tN 120 (307)
T PRK06223 66 EDIAGSDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKYAPDAIVIVVTN 120 (307)
T ss_pred HHHCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 35789999999998654332222222345777777777777766444 3665553
|
|
| >cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.54 E-value=0.00044 Score=68.66 Aligned_cols=115 Identities=16% Similarity=0.132 Sum_probs=76.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|++|+||..++..|+..| .++++++.+ ++....-.+... . ....+... ...+++.
T Consensus 1 ~KI~IIGaaG~VG~~~a~~l~~~~~~~elvLiDi~--~a~g~alDL~~~-----------~--~~~~i~~~--~~~~~~y 63 (310)
T cd01337 1 VKVAVLGAAGGIGQPLSLLLKLNPLVSELALYDIV--NTPGVAADLSHI-----------N--TPAKVTGY--LGPEELK 63 (310)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEecC--ccceeehHhHhC-----------C--CcceEEEe--cCCCchH
Confidence 589999999999999999999888 589999987 332221122111 0 11122111 0113356
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+.++++|+||-+||.......+....++.|......+++..++++.. .||.+|.
T Consensus 64 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~p~a~vivvtN 118 (310)
T cd01337 64 KALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKACPKALILIISN 118 (310)
T ss_pred HhcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccC
Confidence 77899999999999865544444556778999999999999887654 4555543
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.00078 Score=66.21 Aligned_cols=75 Identities=19% Similarity=0.206 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...++|+|.| +|+.|++++..|++.|. +|++++|+.++.+.+.+.+... .+.+.+... ++
T Consensus 125 ~~~k~vlIlG-aGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~-------------~~~~~~~~~-----~~ 185 (284)
T PRK12549 125 ASLERVVQLG-AGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNAR-------------FPAARATAG-----SD 185 (284)
T ss_pred ccCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhh-------------CCCeEEEec-----cc
Confidence 3457899999 58999999999999996 8999999999988887765432 022233221 23
Q ss_pred HHHHhcCCCEEEEcc
Q 013273 157 IEPALGNASVVICCI 171 (446)
Q Consensus 157 ~~~a~~~~D~VI~~A 171 (446)
+.+.+.++|+|||+.
T Consensus 186 ~~~~~~~aDiVInaT 200 (284)
T PRK12549 186 LAAALAAADGLVHAT 200 (284)
T ss_pred hHhhhCCCCEEEECC
Confidence 455678899999994
|
|
| >PTZ00082 L-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00064 Score=67.96 Aligned_cols=119 Identities=8% Similarity=0.085 Sum_probs=75.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~ 154 (446)
|.+.++|.|.| +|.+|..++..|+..|. +|++++.++++.....-.+... .........+.. .|
T Consensus 3 ~~~~~KI~IIG-aG~vG~~ia~~la~~gl~~i~LvDi~~~~~~~~~ld~~~~---------~~~~~~~~~I~~~~d---- 68 (321)
T PTZ00082 3 MIKRRKISLIG-SGNIGGVMAYLIVLKNLGDVVLFDIVKNIPQGKALDISHS---------NVIAGSNSKVIGTNN---- 68 (321)
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHhCCCCeEEEEeCCCchhhHHHHHHHhh---------hhccCCCeEEEECCC----
Confidence 44557999999 59999999999999994 8999999887643211111110 000001223332 22
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccC-----CCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~-----~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+ +.+.++|+||.++|....... +....+..|+.....+++.+.+.+.+ .+|++|.
T Consensus 69 --~-~~l~~aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~~p~a~~iv~sN 129 (321)
T PTZ00082 69 --Y-EDIAGSDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKYCPNAFVIVITN 129 (321)
T ss_pred --H-HHhCCCCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 3 367999999999997543322 22223455777778888888777655 5776664
|
|
| >cd05290 LDH_3 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0017 Score=64.48 Aligned_cols=114 Identities=16% Similarity=0.114 Sum_probs=79.9
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCC-CCceEEEEcCCCChhcHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP-VEMLELVECDLEKRVQIE 158 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~-~~~v~~v~~Dl~d~~~~~ 158 (446)
+|.|.|+ |+||..++..|+..| .++++++.+++++......+... ..+. ...+.+..+| .
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~a~g~a~DL~~~---------~~~~~~~~~~i~~~~-------y 63 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALALGLFSEIVLIDVNEGVAEGEALDFHHA---------TALTYSTNTKIRAGD-------Y 63 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCcchhhHHHHHHHhh---------hccCCCCCEEEEECC-------H
Confidence 4889997 999999999999988 47999999887766555444432 1111 1234554433 3
Q ss_pred HHhcCCCEEEEcccCCCCccCC--CCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFD--ITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~--~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.++++|+||-+||........ -...+..|..-.+.+++.+.+++..-++.+-|
T Consensus 64 ~~~~~aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~~p~~i~ivvs 119 (307)
T cd05290 64 DDCADADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKVTKEAVIILIT 119 (307)
T ss_pred HHhCCCCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 5678999999999975443222 24556789999999999999887555555444
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.0019 Score=58.03 Aligned_cols=66 Identities=32% Similarity=0.347 Sum_probs=50.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++|.+.| .|-.|+.+++.|+++|++|++.+|++++.+.+.+ .++.. .++..+
T Consensus 1 m~~Ig~IG-lG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~-------~~s~~e 53 (163)
T PF03446_consen 1 MMKIGFIG-LGNMGSAMARNLAKAGYEVTVYDRSPEKAEALAE-------------------AGAEV-------ADSPAE 53 (163)
T ss_dssp -BEEEEE---SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHHH-------------------TTEEE-------ESSHHH
T ss_pred CCEEEEEc-hHHHHHHHHHHHHhcCCeEEeeccchhhhhhhHH-------------------hhhhh-------hhhhhh
Confidence 47899999 6999999999999999999999999988877654 22222 245778
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
+++.+|+||-|..
T Consensus 54 ~~~~~dvvi~~v~ 66 (163)
T PF03446_consen 54 AAEQADVVILCVP 66 (163)
T ss_dssp HHHHBSEEEE-SS
T ss_pred HhhcccceEeecc
Confidence 8888999998854
|
1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A .... |
| >PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00061 Score=67.74 Aligned_cols=89 Identities=15% Similarity=0.076 Sum_probs=53.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|.|+| .|.+|..++..|+++|++|++.+|+++..+...+.++.. ++... ..|.............+.-..++.++
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la~~G~~V~v~d~~~~~~~~~~~~~~~~-l~~l~-~~g~~~~~~~~~~~~~i~~~~~~~~a 79 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFARAGHEVRLWDADPAAAAAAPAYIAGR-LEDLA-AFDLLDGEAPDAVLARIRVTDSLADA 79 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHHHCCCeeEEEeCCHHHHHHHHHHHHHH-HHHHH-HcCCCchhhHHHHhcCeEEECcHHHh
Confidence 5799999 899999999999999999999999987766544332211 00000 00100000000000011112346677
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||.+..
T Consensus 80 ~~~ad~Vi~avp 91 (308)
T PRK06129 80 VADADYVQESAP 91 (308)
T ss_pred hCCCCEEEECCc
Confidence 889999999863
|
|
| >cd00757 ThiF_MoeB_HesA_family ThiF_MoeB_HesA | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.0022 Score=60.98 Aligned_cols=108 Identities=19% Similarity=0.259 Sum_probs=72.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.++++.|+..|. ++++++.+ ..|...+.+.++++
T Consensus 19 L~~~~VlivG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---------- 87 (228)
T cd00757 19 LKNARVLVVG-AGGLGSPAAEYLAAAGVGKLGLVDDDVVELSNLQRQILHTEADVGQPKAEAAAERLRAI---------- 87 (228)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCEEcCcccccccccChhhCCChHHHHHHHHHHHh----------
Confidence 4567899999 79999999999999994 67776543 23444445544443
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+..++. .+.+.+.+.++|+||.|... ...-..+-++|.++++ .+|+.+..+
T Consensus 88 -np~~~i~~~~~~i~-~~~~~~~~~~~DvVi~~~d~---------------~~~r~~l~~~~~~~~i-p~i~~g~~g 146 (228)
T cd00757 88 -NPDVEIEAYNERLD-AENAEELIAGYDLVLDCTDN---------------FATRYLINDACVKLGK-PLVSGAVLG 146 (228)
T ss_pred -CCCCEEEEecceeC-HHHHHHHHhCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 11234556655663 45677788999999998542 2334456677888876 788876543
|
Family of E1-like enzymes involved in molybdopterin and thiamine biosynthesis family. The common reaction mechanism catalyzed by MoeB and ThiF, like other E1 enzymes, begins with a nucleophilic attack of the C-terminal carboxylate of MoaD and ThiS, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. MoeB, as the MPT synthase (MoaE/MoaD complex) sulfurase, is involved in the biosynthesis of the molybdenum cofactor, a derivative of the tricyclic pterin, molybdopterin (MPT). ThiF catalyzes the adenylation of ThiS, as part of the biosynthesis pathway of thiamin pyrophosphate (vitamin B1). |
| >PLN00112 malate dehydrogenase (NADP); Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0016 Score=67.51 Aligned_cols=116 Identities=15% Similarity=0.038 Sum_probs=82.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-------CC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-------GF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-------G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
.-+|.|+|++|+||.+++-.|+.. |. ++++++++.+++....-++.+.... .. .++.+...|
T Consensus 100 ~~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~--------~~-~~v~i~~~~ 170 (444)
T PLN00112 100 LINVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYP--------LL-REVSIGIDP 170 (444)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhh--------hc-CceEEecCC
Confidence 358999999999999999999988 63 7999999999887766665543100 00 123222222
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh-CCCC-EEEEEc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVN-HFIMVS 211 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~-~~v~-r~V~vS 211 (446)
.+.++++|+||-.||.......+-...++.|+.....+.+...+ ++-. .||.+|
T Consensus 171 -------ye~~kdaDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~~a~p~~ivIVVs 226 (444)
T PLN00112 171 -------YEVFQDAEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNEVASRNVKVIVVG 226 (444)
T ss_pred -------HHHhCcCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcC
Confidence 45678999999999986554444455678899999999999988 4444 455555
|
|
| >PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00047 Score=69.64 Aligned_cols=99 Identities=21% Similarity=0.124 Sum_probs=62.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEE-EcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~~~ 157 (446)
|++|+|+||||++|+.+++.|.+. +++++++.++.+..+.+.+.. +.+..+ ..++.+.+..
T Consensus 2 m~kVaIiGAtG~vG~~l~~~L~~~p~~elv~v~~~~~~g~~l~~~~-----------------~~~~~~~~~~~~~~~~~ 64 (343)
T PRK00436 2 MIKVGIVGASGYTGGELLRLLLNHPEVEIVAVTSRSSAGKPLSDVH-----------------PHLRGLVDLVLEPLDPE 64 (343)
T ss_pred CeEEEEECCCCHHHHHHHHHHHcCCCceEEEEECccccCcchHHhC-----------------cccccccCceeecCCHH
Confidence 468999999999999999999987 688888777443322221110 111111 1223333322
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.++|+||.|.+.. ....++.++.++|. ++|=.|+..
T Consensus 65 --~~~~vD~Vf~alP~~----------------~~~~~v~~a~~aG~-~VID~S~~f 102 (343)
T PRK00436 65 --ILAGADVVFLALPHG----------------VSMDLAPQLLEAGV-KVIDLSADF 102 (343)
T ss_pred --HhcCCCEEEECCCcH----------------HHHHHHHHHHhCCC-EEEECCccc
Confidence 457899999986541 24566677767774 788888753
|
|
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0023 Score=65.42 Aligned_cols=108 Identities=17% Similarity=0.182 Sum_probs=74.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.+++..|+..|. ++++++++ ..|.+.+.+.++++
T Consensus 133 l~~~~VlvvG-~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~---------- 201 (376)
T PRK08762 133 LLEARVLLIG-AGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAAL---------- 201 (376)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHH----------
Confidence 3556899998 69999999999999995 78999887 45566666665544
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+...+. .+.+.+++.++|+||++... ...-..+-++|.+.++ .||+.+..+
T Consensus 202 -np~v~v~~~~~~~~-~~~~~~~~~~~D~Vv~~~d~---------------~~~r~~ln~~~~~~~i-p~i~~~~~g 260 (376)
T PRK08762 202 -NPDVQVEAVQERVT-SDNVEALLQDVDVVVDGADN---------------FPTRYLLNDACVKLGK-PLVYGAVFR 260 (376)
T ss_pred -CCCCEEEEEeccCC-hHHHHHHHhCCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 11123444444444 34577788999999999532 2223346677888886 788876543
|
|
| >COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00057 Score=67.46 Aligned_cols=116 Identities=19% Similarity=0.172 Sum_probs=79.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|.|+|+ |+||+.++..|+.++ .++++++.++++.+....++... ......-..+.+| .| -
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~~~~~el~LiDi~~~~~~G~a~DL~~~----------~~~~~~~~~i~~~-~~----y 64 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQGLGSELVLIDINEEKAEGVALDLSHA----------AAPLGSDVKITGD-GD----Y 64 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcccccceEEEEEcccccccchhcchhhc----------chhccCceEEecC-CC----h
Confidence 47999999 999999999998876 48999999866554433222211 0011111222222 11 4
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+.++|+||-.||.......+-...+..|..-...+.+...+.+-+-++.+-|
T Consensus 65 ~~~~~aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~~~d~ivlVvt 118 (313)
T COG0039 65 EDLKGADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKYAPDAIVLVVT 118 (313)
T ss_pred hhhcCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCeEEEEec
Confidence 557899999999998766555556667889999999999998886655555544
|
|
| >PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.00052 Score=63.02 Aligned_cols=73 Identities=15% Similarity=0.193 Sum_probs=43.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~~~~~ 159 (446)
+++=--.||..|.+|+++++.+|++|+++..... .. ...++..+..+-.+ .+.+.+
T Consensus 21 R~ItN~SSG~~G~~lA~~~~~~Ga~V~li~g~~~-~~---------------------~p~~~~~i~v~sa~em~~~~~~ 78 (185)
T PF04127_consen 21 RFITNRSSGKMGAALAEEAARRGAEVTLIHGPSS-LP---------------------PPPGVKVIRVESAEEMLEAVKE 78 (185)
T ss_dssp EEEEES--SHHHHHHHHHHHHTT-EEEEEE-TTS--------------------------TTEEEEE-SSHHHHHHHHHH
T ss_pred eEecCCCcCHHHHHHHHHHHHCCCEEEEEecCcc-cc---------------------ccccceEEEecchhhhhhhhcc
Confidence 3444456899999999999999999999998742 11 01467776643322 133444
Q ss_pred HhcCCCEEEEcccCCCC
Q 013273 160 ALGNASVVICCIGASEK 176 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~ 176 (446)
.+..+|++||+|+..+.
T Consensus 79 ~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 79 LLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HGGGGSEEEE-SB--SE
T ss_pred ccCcceeEEEecchhhe
Confidence 55678999999998654
|
These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A. |
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0028 Score=54.90 Aligned_cols=93 Identities=16% Similarity=0.066 Sum_probs=70.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|++.| +| -|.+++..|.+.|++|++++.++...+...+ ..+.++.+|+.++. .
T Consensus 16 ~~~kileIG-~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~~-------------------~~~~~v~dDlf~p~--~ 72 (134)
T PRK04148 16 KNKKIVELG-IG-FYFKVAKKLKESGFDVIVIDINEKAVEKAKK-------------------LGLNAFVDDLFNPN--L 72 (134)
T ss_pred cCCEEEEEE-ec-CCHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------hCCeEEECcCCCCC--H
Confidence 346899999 67 8999999999999999999999986655432 45899999999866 3
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
+.-+++|.|+-+=-. ......+++.+++.++.-+|.
T Consensus 73 ~~y~~a~liysirpp---------------~el~~~~~~la~~~~~~~~i~ 108 (134)
T PRK04148 73 EIYKNAKLIYSIRPP---------------RDLQPFILELAKKINVPLIIK 108 (134)
T ss_pred HHHhcCCEEEEeCCC---------------HHHHHHHHHHHHHcCCCEEEE
Confidence 445788999866322 334667888899888865544
|
|
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.00079 Score=65.66 Aligned_cols=74 Identities=20% Similarity=0.323 Sum_probs=54.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++++|+|+ |++|+.++..|++.|++|+++.|+.++.+.+.+.+... ..+..+. +.+
T Consensus 116 ~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~--------------~~~~~~~--~~~----- 173 (270)
T TIGR00507 116 PNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRY--------------GEIQAFS--MDE----- 173 (270)
T ss_pred cCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhc--------------CceEEec--hhh-----
Confidence 4578999997 89999999999999999999999988887776654321 1222221 111
Q ss_pred HHhcCCCEEEEcccCC
Q 013273 159 PALGNASVVICCIGAS 174 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~ 174 (446)
..+.++|+|||+.+..
T Consensus 174 ~~~~~~DivInatp~g 189 (270)
T TIGR00507 174 LPLHRVDLIINATSAG 189 (270)
T ss_pred hcccCccEEEECCCCC
Confidence 1235799999998764
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >cd05293 LDH_1 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.001 Score=66.17 Aligned_cols=113 Identities=18% Similarity=0.133 Sum_probs=78.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~ 157 (446)
++|.|+|+ |+||..++..|+..| .++++++.+.+++.....++.... . +. ....+.. +| +
T Consensus 4 ~Ki~IiGa-G~VG~~~a~~l~~~~~~~el~LiD~~~~~~~g~a~Dl~~~~--------~-~~-~~~~v~~~~d------y 66 (312)
T cd05293 4 NKVTVVGV-GQVGMACAISILAKGLADELVLVDVVEDKLKGEAMDLQHGS--------A-FL-KNPKIEADKD------Y 66 (312)
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHHHHHhh--------c-cC-CCCEEEECCC------H
Confidence 58999996 999999999999887 589999998877766555554331 0 11 1113332 22 3
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+ .+.++|+||.+||.......+-...+..|..-...+++..++++-+ .+|.+|
T Consensus 67 ~-~~~~adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvs 120 (312)
T cd05293 67 S-VTANSKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKYSPNAILLVVS 120 (312)
T ss_pred H-HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEcc
Confidence 3 3789999999999765533333445677888888888888887544 455555
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK09496 trkA potassium transporter peripheral membrane component; Reviewed | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0023 Score=66.86 Aligned_cols=76 Identities=21% Similarity=0.258 Sum_probs=62.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|.|+ |.+|+.+++.|.+.|++|+++++++++...+.+. + .++.++.+|.+|.+.++
T Consensus 230 ~~~~iiIiG~-G~~g~~l~~~L~~~~~~v~vid~~~~~~~~~~~~-------------~----~~~~~i~gd~~~~~~L~ 291 (453)
T PRK09496 230 PVKRVMIVGG-GNIGYYLAKLLEKEGYSVKLIERDPERAEELAEE-------------L----PNTLVLHGDGTDQELLE 291 (453)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH-------------C----CCCeEEECCCCCHHHHH
Confidence 4678999996 9999999999999999999999998876654331 1 45788999999998886
Q ss_pred HH-hcCCCEEEEccc
Q 013273 159 PA-LGNASVVICCIG 172 (446)
Q Consensus 159 ~a-~~~~D~VI~~Ag 172 (446)
++ +.++|+||-+..
T Consensus 292 ~~~~~~a~~vi~~~~ 306 (453)
T PRK09496 292 EEGIDEADAFIALTN 306 (453)
T ss_pred hcCCccCCEEEECCC
Confidence 54 478999986643
|
|
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0011 Score=64.76 Aligned_cols=107 Identities=19% Similarity=0.227 Sum_probs=71.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|+|.| +|+.+++++..|++.| .+|+++.|+.++++++.+.+... + ..+.. .++.+.+..
T Consensus 125 ~~~~vlilG-AGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~---------~----~~~~~--~~~~~~~~~ 188 (283)
T COG0169 125 TGKRVLILG-AGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGEL---------G----AAVEA--AALADLEGL 188 (283)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhc---------c----ccccc--ccccccccc
Confidence 457899999 5999999999999999 68999999999999988776543 1 11111 222222222
Q ss_pred HHHhcCCCEEEEcccCCCCccC-C----------CCCcccchHH-HHHHHHHHHHhCCCC
Q 013273 158 EPALGNASVVICCIGASEKEVF-D----------ITGPYRIDFQ-ATKNLVDAATIAKVN 205 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~-~----------~~~~~~vNv~-g~~~l~~aa~~~~v~ 205 (446)
. .+|+|||+....-.... + ....+++++. ....+++.|++.|.+
T Consensus 189 ~----~~dliINaTp~Gm~~~~~~~~~~~~~l~~~~~v~D~vY~P~~TplL~~A~~~G~~ 244 (283)
T COG0169 189 E----EADLLINATPVGMAGPEGDSPVPAELLPKGAIVYDVVYNPLETPLLREARAQGAK 244 (283)
T ss_pred c----ccCEEEECCCCCCCCCCCCCCCcHHhcCcCCEEEEeccCCCCCHHHHHHHHcCCe
Confidence 1 68999999764322211 1 1122455555 255688999999874
|
|
| >TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0012 Score=65.73 Aligned_cols=113 Identities=17% Similarity=0.139 Sum_probs=75.1
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|.|+|++|.||..++..|+..| .+++++++++.. .....+. +.. ....+.... +.+++.+
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~~~~~~elvL~Di~~a~--g~a~DL~-----------~~~--~~~~i~~~~--~~~~~~~ 63 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKLQPYVSELSLYDIAGAA--GVAADLS-----------HIP--TAASVKGFS--GEEGLEN 63 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCcEEEEecCCCCc--EEEchhh-----------cCC--cCceEEEec--CCCchHH
Confidence 58999999999999999999887 479999987621 1111111 101 112222101 1123567
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
.++++|+||.+||.......+....+..|+.-.+.+++...+.+..- ||.+|
T Consensus 64 ~~~daDivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~~p~~iiivvs 116 (312)
T TIGR01772 64 ALKGADVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAESCPKAMILVIT 116 (312)
T ss_pred HcCCCCEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHhCCCeEEEEec
Confidence 88999999999998655545555567889999999999988876554 44444
|
Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases. |
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.00099 Score=58.83 Aligned_cols=76 Identities=17% Similarity=0.262 Sum_probs=54.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|+|+ |.+|+.+++.|++.| ++|++.+|+.++...+.+.+... .+..+..+
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~------------------~~~~~~~~--- 74 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGEL------------------GIAIAYLD--- 74 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc------------------ccceeecc---
Confidence 34578999996 999999999999996 88999999988776655433210 01122322
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
..++++++|+||++.....
T Consensus 75 ~~~~~~~~Dvvi~~~~~~~ 93 (155)
T cd01065 75 LEELLAEADLIINTTPVGM 93 (155)
T ss_pred hhhccccCCEEEeCcCCCC
Confidence 3445789999999987644
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >cd05292 LDH_2 A subgroup of L-lactate dehydrogenases | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0032 Score=62.62 Aligned_cols=113 Identities=19% Similarity=0.127 Sum_probs=74.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|.|+ |.+|..++..|+..| .+|++++++.++.......+... .... ....+...| .
T Consensus 1 mkI~IIGa-G~VG~~~a~~l~~~g~~~ev~l~D~~~~~~~g~a~dl~~~---------~~~~-~~~~i~~~d------~- 62 (308)
T cd05292 1 MKVAIVGA-GFVGSTTAYALLLRGLASEIVLVDINKAKAEGEAMDLAHG---------TPFV-KPVRIYAGD------Y- 62 (308)
T ss_pred CEEEEECC-CHHHHHHHHHHHHcCCCCEEEEEECCchhhhhHHHHHHcc---------cccc-CCeEEeeCC------H-
Confidence 47999996 999999999999999 68999999987665332222221 0001 122222222 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+.+.++|+||.++|.......+.......|......+++.+++.+-+ .++.++
T Consensus 63 ~~l~~aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~~~~giiiv~t 116 (308)
T cd05292 63 ADCKGADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKYAPDAILLVVT 116 (308)
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 34789999999999754433333344566888888888888776544 344443
|
L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >PRK08644 thiamine biosynthesis protein ThiF; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0055 Score=57.57 Aligned_cols=106 Identities=17% Similarity=0.254 Sum_probs=71.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
....+|+|.| .|++|..+++.|++.|. ++++++.+. .|...+.+.++++
T Consensus 26 L~~~~V~ViG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~dvG~~Ka~~a~~~l~~l----------- 93 (212)
T PRK08644 26 LKKAKVGIAG-AGGLGSNIAVALARSGVGNLKLVDFDVVEPSNLNRQQYFISQIGMPKVEALKENLLEI----------- 93 (212)
T ss_pred HhCCCEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEeccccccccEeehhhCCChHHHHHHHHHHHH-----------
Confidence 4556899999 69999999999999995 588888762 2344444444433
Q ss_pred CCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEcc
Q 013273 139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSS 212 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS 212 (446)
.+.-+++.+...+.+ +.+.+.+.++|+||.|.- |...-..+.+.|.+. +. .+|+.+.
T Consensus 94 np~v~v~~~~~~i~~-~~~~~~~~~~DvVI~a~D---------------~~~~r~~l~~~~~~~~~~-p~I~~~~ 151 (212)
T PRK08644 94 NPFVEIEAHNEKIDE-DNIEELFKDCDIVVEAFD---------------NAETKAMLVETVLEHPGK-KLVAASG 151 (212)
T ss_pred CCCCEEEEEeeecCH-HHHHHHHcCCCEEEECCC---------------CHHHHHHHHHHHHHhCCC-CEEEeeh
Confidence 112345556556654 456678899999999831 233345566778777 65 6777654
|
|
| >PRK15116 sulfur acceptor protein CsdL; Provisional | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0055 Score=59.53 Aligned_cols=109 Identities=20% Similarity=0.256 Sum_probs=69.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch-------------------hHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~-------------------~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.++++.|++.| .++++++.+.- |.+.+.+.+.++
T Consensus 28 L~~s~VlVvG-~GGVGs~vae~Lar~GVg~itLiD~D~V~~sNlnRQ~~~~~~~vG~~Kve~~~~rl~~I---------- 96 (268)
T PRK15116 28 FADAHICVVG-IGGVGSWAAEALARTGIGAITLIDMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQI---------- 96 (268)
T ss_pred hcCCCEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCEecccccccccccChhhcChHHHHHHHHHHHhH----------
Confidence 4556899999 6999999999999999 68888886522 122233333322
Q ss_pred CCCCCceEEEEcCCCChhcHHHHh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+. +..+.+.+.+.+ .++|+||.+... +..-..|.+.|.++++ .||.+...+.
T Consensus 97 -NP~~~V~~i~-~~i~~e~~~~ll~~~~D~VIdaiD~---------------~~~k~~L~~~c~~~~i-p~I~~gGag~ 157 (268)
T PRK15116 97 -NPECRVTVVD-DFITPDNVAEYMSAGFSYVIDAIDS---------------VRPKAALIAYCRRNKI-PLVTTGGAGG 157 (268)
T ss_pred -CCCcEEEEEe-cccChhhHHHHhcCCCCEEEEcCCC---------------HHHHHHHHHHHHHcCC-CEEEECCccc
Confidence 1112344442 333455666666 479999999643 3344568888888886 6766554443
|
|
| >cd01483 E1_enzyme_family Superfamily of activating enzymes (E1) of the ubiquitin-like proteins | Back alignment and domain information |
|---|
Probab=97.33 E-value=0.0065 Score=53.12 Aligned_cols=105 Identities=18% Similarity=0.262 Sum_probs=70.9
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+|+|.| .|.+|.++++.|++.|. ++++++.+. .|.+.+.+.++++ .+.
T Consensus 1 ~VliiG-~GglGs~ia~~L~~~Gv~~i~ivD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~-----------~p~ 68 (143)
T cd01483 1 RVLLVG-LGGLGSEIALNLARSGVGKITLIDFDTVELSNLNRQFLARQADIGKPKAEVAARRLNEL-----------NPG 68 (143)
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCEEEEEcCCCcCcchhhccccCChhHCCChHHHHHHHHHHHH-----------CCC
Confidence 489999 59999999999999996 688887541 3344444444443 111
Q ss_pred CceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
-+++.+..++.+. ...+.+.++|+||.+.. |......+.+.|+++++ .||..++.+.
T Consensus 69 v~i~~~~~~~~~~-~~~~~~~~~diVi~~~d---------------~~~~~~~l~~~~~~~~i-~~i~~~~~g~ 125 (143)
T cd01483 69 VNVTAVPEGISED-NLDDFLDGVDLVIDAID---------------NIAVRRALNRACKELGI-PVIDAGGLGL 125 (143)
T ss_pred cEEEEEeeecChh-hHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcCCCc
Confidence 3455555555443 34677789999999853 23446667788888886 7878777553
|
This family includes classical ubiquitin-activating enzymes E1, ubiquitin-like (ubl) activating enzymes and other mechanistic homologes, like MoeB, Thif1 and others. The common reaction mechanism catalyzed by MoeB, ThiF and the E1 enzymes begins with a nucleophilic attack of the C-terminal carboxylate of MoaD, ThiS and ubiquitin, respectively, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD and ThiS. |
| >PRK05597 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.004 Score=63.17 Aligned_cols=109 Identities=19% Similarity=0.146 Sum_probs=74.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..+++.|+..| .++++++.+. .|.+.+.+.++++
T Consensus 26 L~~~~VlivG-~GGlGs~~a~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~---------- 94 (355)
T PRK05597 26 LFDAKVAVIG-AGGLGSPALLYLAGAGVGHITIIDDDTVDLSNLHRQVIHSTAGVGQPKAESAREAMLAL---------- 94 (355)
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcccccccCcccChhHCCChHHHHHHHHHHHH----------
Confidence 4567899999 5999999999999999 4788888753 3444555555443
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+..+++ .+...+.+.++|+||.+.. |...-..+-++|.+.++ .||+.+..+.
T Consensus 95 -np~v~v~~~~~~i~-~~~~~~~~~~~DvVvd~~d---------------~~~~r~~~n~~c~~~~i-p~v~~~~~g~ 154 (355)
T PRK05597 95 -NPDVKVTVSVRRLT-WSNALDELRDADVILDGSD---------------NFDTRHLASWAAARLGI-PHVWASILGF 154 (355)
T ss_pred -CCCcEEEEEEeecC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEecC
Confidence 12234555555665 3456678899999999952 22223345577788776 6888776443
|
|
| >TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00076 Score=68.18 Aligned_cols=99 Identities=19% Similarity=0.169 Sum_probs=60.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEE-EcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~~~ 157 (446)
++|.|.||||++|+.+++.|.+. +++++.+ +++.+....+.+.+ +.+... ..++.+ .+.
T Consensus 1 ~kVaIiGATG~vG~ellr~L~~hP~~el~~l~~s~~sagk~~~~~~-----------------~~l~~~~~~~~~~-~~~ 62 (346)
T TIGR01850 1 IKVAIVGASGYTGGELLRLLLNHPEVEITYLVSSRESAGKPVSEVH-----------------PHLRGLVDLNLEP-IDE 62 (346)
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCceEEEEeccchhcCCChHHhC-----------------ccccccCCceeec-CCH
Confidence 47999999999999999999987 5788844 54432211111110 111111 111221 123
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
++++.++|+||.|.+.. ....++..+.++|. ++|=.|+..
T Consensus 63 ~~~~~~~DvVf~alP~~----------------~s~~~~~~~~~~G~-~VIDlS~~f 102 (346)
T TIGR01850 63 EEIAEDADVVFLALPHG----------------VSAELAPELLAAGV-KVIDLSADF 102 (346)
T ss_pred HHhhcCCCEEEECCCch----------------HHHHHHHHHHhCCC-EEEeCChhh
Confidence 44446899999997642 25667777777774 888888854
|
This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons. |
| >cd01485 E1-1_like Ubiquitin activating enzyme (E1), repeat 1-like | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0053 Score=57.06 Aligned_cols=110 Identities=21% Similarity=0.303 Sum_probs=72.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch---------------------hHHHHHHHHHHhhhcccccc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---------------------RAENLVQSVKQMKLDGELAN 135 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~---------------------~~~~l~~~~~~~~l~~~~~~ 135 (446)
....+|+|.|+ |++|.++++.|+..| .++++++.+.- |...+.+.++++
T Consensus 17 L~~s~VlviG~-gglGsevak~L~~~GVg~i~lvD~d~ve~snl~rq~~~~~~~~~iG~~Ka~~~~~~L~~l-------- 87 (198)
T cd01485 17 LRSAKVLIIGA-GALGAEIAKNLVLAGIDSITIVDHRLVSTEDLGSNFFLDAEVSNSGMNRAAASYEFLQEL-------- 87 (198)
T ss_pred HhhCcEEEECC-CHHHHHHHHHHHHcCCCEEEEEECCcCChhcCcccEecccchhhcCchHHHHHHHHHHHH--------
Confidence 34568999995 559999999999999 56888876421 222233333333
Q ss_pred cCCCCCCceEEEEcCCCC-hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 136 KGIQPVEMLELVECDLEK-RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 136 ~g~~~~~~v~~v~~Dl~d-~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+..++.+ .+...+.+..+|+||.+.. +......+-+.|+++++ .||+.++.+
T Consensus 88 ---Np~v~i~~~~~~~~~~~~~~~~~~~~~dvVi~~~d---------------~~~~~~~ln~~c~~~~i-p~i~~~~~G 148 (198)
T cd01485 88 ---NPNVKLSIVEEDSLSNDSNIEEYLQKFTLVIATEE---------------NYERTAKVNDVCRKHHI-PFISCATYG 148 (198)
T ss_pred ---CCCCEEEEEecccccchhhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeec
Confidence 122355666666652 3456677889999998732 23334556688888887 788888766
Q ss_pred c
Q 013273 215 T 215 (446)
Q Consensus 215 ~ 215 (446)
.
T Consensus 149 ~ 149 (198)
T cd01485 149 L 149 (198)
T ss_pred C
Confidence 5
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homol |
| >cd01487 E1_ThiF_like E1_ThiF_like | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0063 Score=55.34 Aligned_cols=101 Identities=17% Similarity=0.298 Sum_probs=66.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc------------------hhHHHHHHHHHHhhhcccccccCCCCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGIQPVE 142 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~------------------~~~~~l~~~~~~~~l~~~~~~~g~~~~~ 142 (446)
+|+|.| .|++|..+++.|++.|. ++++++++. .|.+.+.+.++++ .+.-
T Consensus 1 ~VlViG-~GglGs~ia~~La~~Gvg~i~lvD~D~v~~sNl~Rq~~~~~~vg~~Ka~~~~~~l~~l-----------np~v 68 (174)
T cd01487 1 KVGIAG-AGGLGSNIAVLLARSGVGNLKLVDFDVVEPSNLNRQQYFLSQIGEPKVEALKENLREI-----------NPFV 68 (174)
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCeEEEEeCCEEcCcchhcccccHhhCCChHHHHHHHHHHHH-----------CCCC
Confidence 489999 69999999999999996 599999875 2333333333332 1123
Q ss_pred ceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEc
Q 013273 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVS 211 (446)
Q Consensus 143 ~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vS 211 (446)
+++.+...+.. +.+.+.++++|+||.+.. |...-..+.+.+.+. ++ .||+-+
T Consensus 69 ~i~~~~~~~~~-~~~~~~l~~~DlVi~~~d---------------~~~~r~~i~~~~~~~~~i-p~i~~~ 121 (174)
T cd01487 69 KIEAINIKIDE-NNLEGLFGDCDIVVEAFD---------------NAETKAMLAESLLGNKNK-PVVCAS 121 (174)
T ss_pred EEEEEEeecCh-hhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHHCCC-CEEEEe
Confidence 45555555543 557788899999999832 233334566777766 65 666653
|
Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05690 molybdopterin biosynthesis protein MoeB; Provisional | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0072 Score=58.08 Aligned_cols=107 Identities=15% Similarity=0.234 Sum_probs=70.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.|+ |++|..+++.|+..| .++++++.+. .|.+.+.+.++++
T Consensus 30 L~~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~Ka~~a~~~l~~l---------- 98 (245)
T PRK05690 30 LKAARVLVVGL-GGLGCAASQYLAAAGVGTLTLVDFDTVSLSNLQRQVLHDDATIGQPKVESARAALARI---------- 98 (245)
T ss_pred hcCCeEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCEECcchhhhhhcCChhhCCChHHHHHHHHHHHH----------
Confidence 45678999996 999999999999999 4788877643 2333333333332
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+++.+...+. .+.+.+.+.++|+||.+.. |...-..+-++|.+++. .||+.+..
T Consensus 99 -np~v~i~~~~~~i~-~~~~~~~~~~~DiVi~~~D---------------~~~~r~~ln~~~~~~~i-p~v~~~~~ 156 (245)
T PRK05690 99 -NPHIAIETINARLD-DDELAALIAGHDLVLDCTD---------------NVATRNQLNRACFAAKK-PLVSGAAI 156 (245)
T ss_pred -CCCCEEEEEeccCC-HHHHHHHHhcCCEEEecCC---------------CHHHHHHHHHHHHHhCC-EEEEeeec
Confidence 11234555555554 3456778899999999952 23333456677888875 78775543
|
|
| >cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0057 Score=58.22 Aligned_cols=108 Identities=22% Similarity=0.260 Sum_probs=70.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.++++.|++.| .++++++.+. .|.+.+.+.+.++
T Consensus 9 L~~~~VlVvG-~GGvGs~va~~Lar~GVg~i~LvD~D~V~~sNlnRq~~~~~~diG~~Kae~~~~~l~~i---------- 77 (231)
T cd00755 9 LRNAHVAVVG-LGGVGSWAAEALARSGVGKLTLIDFDVVCVSNLNRQIHALLSTVGKPKVEVMAERIRDI---------- 77 (231)
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEECchhhcchhCcChhhCCCcHHHHHHHHHHHH----------
Confidence 3456899999 7999999999999999 4788877653 2333344444433
Q ss_pred CCCCCceEEEEcCCCChhcHHHHh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+...++ .+.+...+ .++|+||.+.. |+..-..|.+.|.++++ .||...+.+
T Consensus 78 -nP~~~V~~~~~~i~-~~~~~~l~~~~~D~VvdaiD---------------~~~~k~~L~~~c~~~~i-p~I~s~g~g 137 (231)
T cd00755 78 -NPECEVDAVEEFLT-PDNSEDLLGGDPDFVVDAID---------------SIRAKVALIAYCRKRKI-PVISSMGAG 137 (231)
T ss_pred -CCCcEEEEeeeecC-HhHHHHHhcCCCCEEEEcCC---------------CHHHHHHHHHHHHHhCC-CEEEEeCCc
Confidence 11234555554444 34556666 46999999853 24445668888988876 566554443
|
coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown. |
| >PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0008 Score=67.62 Aligned_cols=95 Identities=21% Similarity=0.213 Sum_probs=57.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe---EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFR---VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~---V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++++|.|+||||++|+.|++.|.+++|. ++.+. +.+..... + ...+ ...++.+.+
T Consensus 3 ~~~~IaIvGATG~vG~eLlrlL~~~~hP~~~l~~v~-s~~~aG~~---l---------------~~~~---~~l~~~~~~ 60 (336)
T PRK05671 3 QPLDIAVVGATGTVGEALVQILEERDFPVGTLHLLA-SSESAGHS---V---------------PFAG---KNLRVREVD 60 (336)
T ss_pred CCCEEEEEccCCHHHHHHHHHHhhCCCCceEEEEEE-CcccCCCe---e---------------ccCC---cceEEeeCC
Confidence 4478999999999999999999987753 33443 33221100 0 0011 123333333
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.. + ++++|+||-+.+.. ....++..+.++|+ ++|=.|+..
T Consensus 61 ~~-~-~~~vD~vFla~p~~----------------~s~~~v~~~~~~G~-~VIDlS~~f 100 (336)
T PRK05671 61 SF-D-FSQVQLAFFAAGAA----------------VSRSFAEKARAAGC-SVIDLSGAL 100 (336)
T ss_pred hH-H-hcCCCEEEEcCCHH----------------HHHHHHHHHHHCCC-eEEECchhh
Confidence 22 2 57899999987631 13447777777776 677777643
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.00076 Score=57.45 Aligned_cols=97 Identities=24% Similarity=0.238 Sum_probs=57.1
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-CeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-FRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|.|+||||++|+.|++.|+++- ++++. +.|+.+....+....... .....+.+.. .+ .+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~-----------~~~~~~~~~~---~~----~~ 62 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHP-----------KGFEDLSVED---AD----PE 62 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGG-----------TTTEEEBEEE---TS----GH
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhcccc-----------ccccceeEee---cc----hh
Confidence 68999999999999999999963 56554 444442322222111100 0001222222 22 23
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.++|+||.|.+. .....++..+.+.|+ ++|=.|+.
T Consensus 63 ~~~~~Dvvf~a~~~----------------~~~~~~~~~~~~~g~-~ViD~s~~ 99 (121)
T PF01118_consen 63 ELSDVDVVFLALPH----------------GASKELAPKLLKAGI-KVIDLSGD 99 (121)
T ss_dssp HHTTESEEEE-SCH----------------HHHHHHHHHHHHTTS-EEEESSST
T ss_pred HhhcCCEEEecCch----------------hHHHHHHHHHhhCCc-EEEeCCHH
Confidence 34889999999754 225566777778887 67666654
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PLN02602 lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0018 Score=65.46 Aligned_cols=113 Identities=11% Similarity=0.115 Sum_probs=78.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~ 157 (446)
++|.|+|+ |.||..++..|+..| .++++++.+++++.....++.... . + .....+.. +| +
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~LiDi~~~~~~g~a~DL~~~~--------~-~-~~~~~i~~~~d------y 100 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQDLADELALVDVNPDKLRGEMLDLQHAA--------A-F-LPRTKILASTD------Y 100 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCCchhhHHHHHHHhhh--------h-c-CCCCEEEeCCC------H
Confidence 69999995 999999999999887 479999998887766555554331 0 0 11233322 22 2
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+ .++++|+||-+||.......+....+..|+.-...+++..++++.+ .+|.+|
T Consensus 101 ~-~~~daDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~~p~~ivivvt 154 (350)
T PLN02602 101 A-VTAGSDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKYSPDTILLIVS 154 (350)
T ss_pred H-HhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 2 3789999999999765443333445667888888888888877544 455555
|
|
| >TIGR02355 moeB molybdopterin synthase sulfurylase MoeB | Back alignment and domain information |
|---|
Probab=97.24 E-value=0.007 Score=57.99 Aligned_cols=108 Identities=14% Similarity=0.258 Sum_probs=70.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..++..|+..| -++++++++. .|.+.+.+.++++
T Consensus 22 L~~~~VlvvG-~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~i---------- 90 (240)
T TIGR02355 22 LKASRVLIVG-LGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQI---------- 90 (240)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHH----------
Confidence 4456899999 6999999999999999 5777777643 2233333344333
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+...+. .+.+.+.+.++|+||.+.. |...-..+-++|.++++ .||+.+..+
T Consensus 91 -np~v~i~~~~~~i~-~~~~~~~~~~~DlVvd~~D---------------~~~~r~~ln~~~~~~~i-p~v~~~~~g 149 (240)
T TIGR02355 91 -NPHIAINPINAKLD-DAELAALIAEHDIVVDCTD---------------NVEVRNQLNRQCFAAKV-PLVSGAAIR 149 (240)
T ss_pred -CCCcEEEEEeccCC-HHHHHHHhhcCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecc
Confidence 11133444444443 3557788899999999853 23334456678888886 787766543
|
This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899). |
| >TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0041 Score=63.52 Aligned_cols=117 Identities=13% Similarity=0.052 Sum_probs=79.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-Ce----EEE--E--EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FR----VRA--G--VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~----V~~--~--~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
.-+|.|+|++|.||.+++..|+..| .. |.+ + +++.+++.....++.+.... . ..++.+...|
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~--------~-~~~v~i~~~~ 114 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYP--------L-LREVSIGIDP 114 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhh--------h-cCceEEecCC
Confidence 4589999999999999999999887 22 333 3 77888777665555543100 0 0223322222
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEcc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS 212 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vSS 212 (446)
.+.++++|+||.+||.......+....+..|+.....+++...++. -. .+|.+|.
T Consensus 115 -------y~~~kdaDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~a~~~~iviVVsN 171 (387)
T TIGR01757 115 -------YEVFEDADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAVASKNCKVLVVGN 171 (387)
T ss_pred -------HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 4567899999999998655444445567789999999999998843 33 5555553
|
This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized. |
| >PRK08328 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0092 Score=56.83 Aligned_cols=114 Identities=21% Similarity=0.228 Sum_probs=70.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHH---------------HhhhcccccccCCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVK---------------QMKLDGELANKGIQPV 141 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~---------------~~~l~~~~~~~g~~~~ 141 (446)
..+.+|+|.| .|++|.+++..|+..| .++++++.+.-....+.+.+- ..++. ...+.
T Consensus 25 L~~~~VlIiG-~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~------~~np~ 97 (231)
T PRK08328 25 LKKAKVAVVG-VGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLE------RFNSD 97 (231)
T ss_pred HhCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHH------HhCCC
Confidence 4456899999 6999999999999999 578888765433322221110 00000 00112
Q ss_pred CceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
-.++.+...+. .+.+.+.++++|+||.+..- ...-..+-++|++.++ .+|+.+..+.
T Consensus 98 v~v~~~~~~~~-~~~~~~~l~~~D~Vid~~d~---------------~~~r~~l~~~~~~~~i-p~i~g~~~g~ 154 (231)
T PRK08328 98 IKIETFVGRLS-EENIDEVLKGVDVIVDCLDN---------------FETRYLLDDYAHKKGI-PLVHGAVEGT 154 (231)
T ss_pred CEEEEEeccCC-HHHHHHHHhcCCEEEECCCC---------------HHHHHHHHHHHHHcCC-CEEEEeeccC
Confidence 34555555553 45577788999999998532 2223345567778876 7887666543
|
|
| >cd05295 MDH_like Malate dehydrogenase-like | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0043 Score=64.43 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=79.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---C----CeEEEEEc--CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL---G----FRVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~---G----~~V~~~~R--~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
...-+|+||||+|.||.+|+-.+++- | ..+++++. +.+++....-++.+..+. . ...+.+..
T Consensus 121 ~~p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~p--------l-l~~v~i~~ 191 (452)
T cd05295 121 INPLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFP--------L-LRGISVTT 191 (452)
T ss_pred CCceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHh--------h-cCCcEEEE
Confidence 34458999999999999999999872 3 34677777 456665555555432100 0 02233332
Q ss_pred cCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC--CEEEEEcc
Q 013273 149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVSS 212 (446)
Q Consensus 149 ~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v--~r~V~vSS 212 (446)
...++|+++|+||-.+|.......+-....+.|..-...+.++..++.- .+++.+.|
T Consensus 192 -------~~~ea~~daDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~a~~~~~VlVv~t 250 (452)
T cd05295 192 -------DLDVAFKDAHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKNAKEDVKVIVAGR 250 (452)
T ss_pred -------CCHHHhCCCCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEeC
Confidence 1257789999999999976554444445567788888889988887754 46666665
|
These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >COG4982 3-oxoacyl-[acyl-carrier protein] | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.02 Score=60.49 Aligned_cols=220 Identities=15% Similarity=0.087 Sum_probs=128.7
Q ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT-GKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat-G~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...+.+|||||+ |-||-.++..|+.-|..|++...+-++ .....+.+-.. +......+.+|.+|+....
T Consensus 394 y~d~valVTGA~~gSIaa~Vv~~LL~gGAtVI~TTS~~s~~r~efyr~LYa~---------~a~~ga~LwvVpaN~~Sys 464 (866)
T COG4982 394 YGDKVALVTGASKGSIAAAVVARLLAGGATVIATTSRLSEERTEFYRSLYAR---------HARYGAALWVVPANMGSYS 464 (866)
T ss_pred cccceEEEecCCCcchHHHHHHHHHhCCcEEEEEcccccHHHHHHHHHHHHh---------hCCCCceEEEEeccccchh
Confidence 456789999986 789999999999999999997765543 23333333221 2223367888999998777
Q ss_pred cHHHHhc---------------------CCCEEEEcccCCCCc-cCC----CCCcccchHHHHHHHHHHHHhCC----CC
Q 013273 156 QIEPALG---------------------NASVVICCIGASEKE-VFD----ITGPYRIDFQATKNLVDAATIAK----VN 205 (446)
Q Consensus 156 ~~~~a~~---------------------~~D~VI~~Ag~~~~~-~~~----~~~~~~vNv~g~~~l~~aa~~~~----v~ 205 (446)
+++.+++ ..|.+|-+|+..... ..+ .+..+++-++...+++-..++.+ +.
T Consensus 465 DVdAlIewIg~eq~~t~g~~s~~~k~a~~ptll~PFAAp~v~G~l~~agsraE~~~rilLw~V~Rliggl~~~~s~r~v~ 544 (866)
T COG4982 465 DVDALIEWIGDEQTETVGPQSIHIKLAWTPTLLFPFAAPRVSGELADAGSRAEFAMRILLWNVLRLIGGLKKQGSSRGVD 544 (866)
T ss_pred hHHHHHHHhccccccccCCcceecccccCcceeeecccCCccCccccCCchHHHHHHHHHHHHHHHHHHhhhhccccCcc
Confidence 7777651 137888887753221 111 12335566666777776666543 21
Q ss_pred ---EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHHh----CC----CCEEEEecCCccCCCcccccccceeecc
Q 013273 206 ---HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA----SG----LPYTIVRPGGMERPTDAYKETHNITLSQ 274 (446)
Q Consensus 206 ---r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~----~g----l~~tivRPg~v~gp~~~~~~~~~~~~~~ 274 (446)
|+|.-.|-.-..+| .-..|+.+|...|.++.+ ++ +.++--+.||+-|-+- ....++....
T Consensus 545 ~R~hVVLPgSPNrG~FG-------gDGaYgEsK~aldav~~RW~sEs~Wa~~vsl~~A~IGWtrGTGL--Mg~Ndiiv~a 615 (866)
T COG4982 545 TRLHVVLPGSPNRGMFG-------GDGAYGESKLALDAVVNRWHSESSWAARVSLAHALIGWTRGTGL--MGHNDIIVAA 615 (866)
T ss_pred cceEEEecCCCCCCccC-------CCcchhhHHHHHHHHHHHhhccchhhHHHHHhhhheeeeccccc--cCCcchhHHH
Confidence 56665553322222 223599999999988863 22 3344456777766541 1112222211
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCC----CCCCcEEEEecCCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRS----LSYCKVVEVIAETTA 315 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~----~~~~~v~ni~~~~~~ 315 (446)
-...--...+.+++|.-++-++.... ....-.+++.++-..
T Consensus 616 iEk~GV~tyS~~EmA~~LLgL~saev~e~a~~~PI~aDLtGGL~~ 660 (866)
T COG4982 616 IEKAGVRTYSTDEMAFNLLGLASAEVVELAASSPITADLTGGLGE 660 (866)
T ss_pred HHHhCceecCHHHHHHHHHhhccHHHHHHHhcCCeEeeccCcccc
Confidence 11111124567778887777765321 122446778776543
|
|
| >PRK08223 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.011 Score=57.88 Aligned_cols=110 Identities=19% Similarity=0.260 Sum_probs=71.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..++..|+..| -++++++.+. .|.+.+.+.++++
T Consensus 25 L~~s~VlIvG-~GGLGs~va~~LA~aGVG~i~lvD~D~Ve~SNLnRQ~l~~~~diG~~Kve~a~~~l~~i---------- 93 (287)
T PRK08223 25 LRNSRVAIAG-LGGVGGIHLLTLARLGIGKFTIADFDVFELRNFNRQAGAMMSTLGRPKAEVLAEMVRDI---------- 93 (287)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHhCCCeEEEEeCCCcchhccccccCcChhHCCCcHHHHHHHHHHHH----------
Confidence 4556899999 6999999999999999 4777777642 2233333333332
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+++.+...++ .+.+.+++.++|+||++.--. ++..-..+-++|.++++ .+|+.+..+
T Consensus 94 -NP~v~V~~~~~~l~-~~n~~~ll~~~DlVvD~~D~~-------------~~~~r~~ln~~c~~~~i-P~V~~~~~g 154 (287)
T PRK08223 94 -NPELEIRAFPEGIG-KENADAFLDGVDVYVDGLDFF-------------EFDARRLVFAACQQRGI-PALTAAPLG 154 (287)
T ss_pred -CCCCEEEEEecccC-ccCHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHcCC-CEEEEeccC
Confidence 22235566665665 455788899999999764110 12233455677888886 788876544
|
|
| >cd00300 LDH_like L-lactate dehydrogenase-like enzymes | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0058 Score=60.53 Aligned_cols=112 Identities=14% Similarity=0.131 Sum_probs=78.6
Q ss_pred EEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 83 AFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|.|.|+ |+||..++..|+..| .++++++++.++.......+.... .. .....+..+ .| .+.
T Consensus 1 i~iiGa-G~VG~~~a~~l~~~~~~~el~l~D~~~~~~~g~~~DL~~~~--------~~--~~~~~i~~~--~~----~~~ 63 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALIAKGLASELVLVDVNEEKAKGDALDLSHAS--------AF--LATGTIVRG--GD----YAD 63 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCccHHHHHHHhHHHhc--------cc--cCCCeEEEC--CC----HHH
Confidence 468885 899999999999998 789999999988887776665541 10 012233321 11 347
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+.++|+||.++|.......+....+..|+.....+++..++++-+ .+|.+|
T Consensus 64 l~~aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~~p~~~viv~s 115 (300)
T cd00300 64 AADADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKYGPDAIILVVS 115 (300)
T ss_pred hCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcc
Confidence 899999999999765443444455667888888899988887544 455554
|
Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot |
| >PRK05600 thiamine biosynthesis protein ThiF; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0076 Score=61.47 Aligned_cols=107 Identities=18% Similarity=0.208 Sum_probs=72.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..++..|+..| .++++++++. .|...+.+.+.++
T Consensus 39 l~~~~VliiG-~GglG~~v~~~La~~Gvg~i~ivD~D~ve~sNL~RQ~l~~~~diG~~Ka~~~~~~l~~~---------- 107 (370)
T PRK05600 39 LHNARVLVIG-AGGLGCPAMQSLASAGVGTITLIDDDTVDVSNIHRQILFGASDVGRPKVEVAAERLKEI---------- 107 (370)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEEeCCEEccccccccccCChhHCCCHHHHHHHHHHHHH----------
Confidence 4556899999 6999999999999999 5888888762 3334444444433
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+++.+...++ .+.+.+++.++|+||.|.- |+..-..+-++|.+.++ .+|+.+..
T Consensus 108 -np~v~i~~~~~~i~-~~~~~~~~~~~DlVid~~D---------------n~~~r~~in~~~~~~~i-P~v~~~~~ 165 (370)
T PRK05600 108 -QPDIRVNALRERLT-AENAVELLNGVDLVLDGSD---------------SFATKFLVADAAEITGT-PLVWGTVL 165 (370)
T ss_pred -CCCCeeEEeeeecC-HHHHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence 11234556655564 4557788899999999852 33334445577777776 67776653
|
|
| >TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0031 Score=62.65 Aligned_cols=116 Identities=13% Similarity=0.047 Sum_probs=71.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|.|.|+ |.+|..++..|+..|+ +|++++++++........+... +........ +.-..++++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la~~g~~~VvlvDi~~~l~~g~a~d~~~~---------~~~~~~~~~-----i~~t~d~~~ 66 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLAEKELADLVLLDVVEGIPQGKALDMYEA---------SPVGGFDTK-----VTGTNNYAD 66 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHHHcCCCeEEEEeCCCChhHHHHHhhhhh---------hhccCCCcE-----EEecCCHHH
Confidence 57999995 9999999999999886 8999999766443221111111 000000111 111122333
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+.++|+||-++|.......+....+..|......+++...+++-. .+|.+|.
T Consensus 67 -~~~aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~~p~~~iIv~tN 119 (305)
T TIGR01763 67 -TANSDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEHSPNPIIVVVSN 119 (305)
T ss_pred -hCCCCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 688999999999754432222234556888888888888776433 4555554
|
The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable. |
| >cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1 | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.011 Score=55.01 Aligned_cols=108 Identities=14% Similarity=0.159 Sum_probs=70.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.|+ |++|.++++.|+..|. ++++++.+. .|.+.+.+.++++
T Consensus 19 L~~s~VlIiG~-gglG~evak~La~~GVg~i~lvD~d~ve~snL~rqfl~~~~diG~~Ka~a~~~~L~~l---------- 87 (197)
T cd01492 19 LRSARILLIGL-KGLGAEIAKNLVLSGIGSLTILDDRTVTEEDLGAQFLIPAEDLGQNRAEASLERLRAL---------- 87 (197)
T ss_pred HHhCcEEEEcC-CHHHHHHHHHHHHcCCCEEEEEECCcccHhhCCCCccccHHHcCchHHHHHHHHHHHH----------
Confidence 45568999994 6699999999999994 688877542 2333444444443
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.....+. +...+.+.++|+||.+.. |...-..+-+.|++.++ .||+.++.+.
T Consensus 88 -Np~v~i~~~~~~~~--~~~~~~~~~~dvVi~~~~---------------~~~~~~~ln~~c~~~~i-p~i~~~~~G~ 146 (197)
T cd01492 88 -NPRVKVSVDTDDIS--EKPEEFFSQFDVVVATEL---------------SRAELVKINELCRKLGV-KFYATGVHGL 146 (197)
T ss_pred -CCCCEEEEEecCcc--ccHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEecCC
Confidence 12234555555554 234566789999998742 22334456678888887 7888777654
|
Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain. |
| >PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0056 Score=63.93 Aligned_cols=76 Identities=16% Similarity=0.156 Sum_probs=51.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|+|++| +|..+++.|++.|++|++.+++........+.+.. .++.+..++.. .
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~~~G~~V~~~d~~~~~~~~~~~~l~~---------------~g~~~~~~~~~--~--- 62 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLHKLGANVTVNDGKPFSENPEAQELLE---------------EGIKVICGSHP--L--- 62 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHHHCCCEEEEEcCCCccchhHHHHHHh---------------cCCEEEeCCCC--H---
Confidence 467899999876 99999999999999999998865433322222222 23444443221 1
Q ss_pred HHhc-CCCEEEEcccCCC
Q 013273 159 PALG-NASVVICCIGASE 175 (446)
Q Consensus 159 ~a~~-~~D~VI~~Ag~~~ 175 (446)
..+. ++|.||++.|...
T Consensus 63 ~~~~~~~d~vV~s~gi~~ 80 (447)
T PRK02472 63 ELLDEDFDLMVKNPGIPY 80 (447)
T ss_pred HHhcCcCCEEEECCCCCC
Confidence 1233 4899999998753
|
|
| >TIGR01915 npdG NADPH-dependent F420 reductase | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0023 Score=60.33 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=38.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
|+|.|+||+|.+|..++..|++.|++|++.+|++++...+.+.
T Consensus 1 MkI~IIGG~G~mG~ala~~L~~~G~~V~v~~r~~~~~~~l~~~ 43 (219)
T TIGR01915 1 MKIAVLGGTGDQGKGLALRLAKAGNKIIIGSRDLEKAEEAAAK 43 (219)
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCEEEEEEcCHHHHHHHHHH
Confidence 5799999999999999999999999999999998887766543
|
This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase. |
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.14 Score=45.64 Aligned_cols=199 Identities=16% Similarity=0.120 Sum_probs=110.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC---hhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---RVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---~~~~ 157 (446)
.+|+|-||-|-+|++.++.+.+++|-|.-++-.++... .--.++.+|-.= .+++
T Consensus 4 grVivYGGkGALGSacv~~FkannywV~siDl~eNe~A-----------------------d~sI~V~~~~swtEQe~~v 60 (236)
T KOG4022|consen 4 GRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQA-----------------------DSSILVDGNKSWTEQEQSV 60 (236)
T ss_pred ceEEEEcCcchHhHHHHHHHHhcCeEEEEEeecccccc-----------------------cceEEecCCcchhHHHHHH
Confidence 57999999999999999999999999887776553211 112233333321 1222
Q ss_pred ----HHHh--cCCCEEEEcccCCCCcc---CC----CCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCCchh
Q 013273 158 ----EPAL--GNASVVICCIGASEKEV---FD----ITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ----~~a~--~~~D~VI~~Ag~~~~~~---~~----~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~~~~ 223 (446)
.+.+ +.+|.|||.||...... .+ .+.++.-.+.-..--...+..+ +.+-++.+......-.+.
T Consensus 61 ~~~vg~sL~gekvDav~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAkaAl~gT--- 137 (236)
T KOG4022|consen 61 LEQVGSSLQGEKVDAVFCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAKAALGGT--- 137 (236)
T ss_pred HHHHHHhhcccccceEEEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccccccCCC---
Confidence 2223 35899999998432111 11 1222222222222222222222 333355444432222222
Q ss_pred hhchhhHHHHHHHHHHHHHH-----hCCCC----EEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-----ASGLP----YTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-----~~gl~----~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
..+-+|+..|.++.++.+ ++|++ ...|-|-.+..|..+ -.....-+..|....-+++.++.
T Consensus 138 --PgMIGYGMAKaAVHqLt~SLaak~SGlP~gsaa~~ilPVTLDTPMNR--------KwMP~ADfssWTPL~fi~e~flk 207 (236)
T KOG4022|consen 138 --PGMIGYGMAKAAVHQLTSSLAAKDSGLPDGSAALTILPVTLDTPMNR--------KWMPNADFSSWTPLSFISEHFLK 207 (236)
T ss_pred --CcccchhHHHHHHHHHHHHhcccccCCCCCceeEEEeeeeccCcccc--------ccCCCCcccCcccHHHHHHHHHH
Confidence 345689999999998876 35554 445555555555321 11122335678888888888877
Q ss_pred HHhCCC-CCCCcEEEEecCCCC
Q 013273 295 MAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
-..... ...+..+.|+..+..
T Consensus 208 Wtt~~~RPssGsLlqi~TtnG~ 229 (236)
T KOG4022|consen 208 WTTETSRPSSGSLLQITTTNGT 229 (236)
T ss_pred HhccCCCCCCCceEEEEecCCe
Confidence 765422 245667777665543
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0014 Score=65.82 Aligned_cols=97 Identities=19% Similarity=0.313 Sum_probs=72.2
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcc-cchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPY-RIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~-~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
.+.+++.+|++-|.+..........+ .+++..+..|++++. +.+.+++|.++|.+... ...+..|.++
T Consensus 200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~~~~K~~vIvTSfn~~~-------~s~~f~Yfk~ 272 (410)
T PF08732_consen 200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKNTGNKKLVIVTSFNNNA-------ISSMFPYFKT 272 (410)
T ss_pred chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhccCCCceEEEEEecCcch-------hhhhhhhhHH
Confidence 45678899999997654333322333 667777778888877 77889999999987633 2455679999
Q ss_pred HHHHHHHHHhC--C-C-CEEEEecCCccCCCcc
Q 013273 235 KRKAEEALIAS--G-L-PYTIVRPGGMERPTDA 263 (446)
Q Consensus 235 K~~~E~~l~~~--g-l-~~tivRPg~v~gp~~~ 263 (446)
|...|.-|... + + ..+|+|||.+.|.++.
T Consensus 273 K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 273 KGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred HHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 99999998853 2 3 5889999999998654
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0029 Score=62.63 Aligned_cols=113 Identities=14% Similarity=0.092 Sum_probs=69.0
Q ss_pred EEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
|.|.|+ |.+|..++..|+..|. +|++++++++........+... .........+.. . .| + +.+
T Consensus 1 I~IIGa-G~vG~~ia~~la~~~l~eV~L~Di~e~~~~g~~~dl~~~---------~~~~~~~~~I~~-t-~d---~-~~l 64 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLALKELGDVVLLDIVEGLPQGKALDISQA---------APILGSDTKVTG-T-ND---Y-EDI 64 (300)
T ss_pred CEEECC-CHHHHHHHHHHHhCCCcEEEEEeCCCcHHHHHHHHHHHh---------hhhcCCCeEEEE-c-CC---H-HHh
Confidence 568997 9999999999998876 9999999987554332222211 000001122211 0 11 3 347
Q ss_pred cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 162 GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 162 ~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
.++|+||.++|.......+......-|+.....+++.+.+..... +|.+|
T Consensus 65 ~dADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~~p~~~iIv~s 115 (300)
T cd01339 65 AGSDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKYAPNAIVIVVT 115 (300)
T ss_pred CCCCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 999999999987544332222233457777778888887765443 45555
|
Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas |
| >PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ] | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0032 Score=57.84 Aligned_cols=40 Identities=25% Similarity=0.179 Sum_probs=32.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
|+|.|.| .|++|.-++..|++.||+|++++.++++.+.++
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA~~G~~V~g~D~~~~~v~~l~ 40 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALAEKGHQVIGVDIDEEKVEALN 40 (185)
T ss_dssp -EEEEE---STTHHHHHHHHHHTTSEEEEE-S-HHHHHHHH
T ss_pred CEEEEEC-CCcchHHHHHHHHhCCCEEEEEeCChHHHHHHh
Confidence 6899998 899999999999999999999999998877654
|
The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D .... |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0026 Score=70.88 Aligned_cols=165 Identities=15% Similarity=0.150 Sum_probs=108.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
-..+..+|+||-|+.|..|++-|+.+|.+ +++.+|+.-+.--....++.++-.| -.|.+-.-|++..+.
T Consensus 1766 hpeksYii~GGLGGFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~G----------VqV~vsT~nitt~~g 1835 (2376)
T KOG1202|consen 1766 HPEKSYIIVGGLGGFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRG----------VQVQVSTSNITTAEG 1835 (2376)
T ss_pred CccceEEEeccccchhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcC----------eEEEEecccchhhhh
Confidence 34578999999999999999999999965 5666777544322222333332222 234444567776666
Q ss_pred HHHHh------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 157 IEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 157 ~~~a~------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
..+++ +.+-.|||+|..-.. ...++...-+--+.|+.||=+..++. -.+.||.+||....+..
T Consensus 1836 a~~Li~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~C~~LdyFv~FSSvscGRGN--- 1912 (2376)
T KOG1202|consen 1836 ARGLIEESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREICPELDYFVVFSSVSCGRGN--- 1912 (2376)
T ss_pred HHHHHHHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhhCcccceEEEEEeecccCCC---
Confidence 66665 346889999875322 22222333334567777777666665 35689999998764432
Q ss_pred hhhchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCcc
Q 013273 223 AILNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGME 258 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~ 258 (446)
...+.||.+...+|+++.+ +|++-+.|.=|.|-
T Consensus 1913 ---~GQtNYG~aNS~MERiceqRr~~GfPG~AiQWGAIG 1948 (2376)
T KOG1202|consen 1913 ---AGQTNYGLANSAMERICEQRRHEGFPGTAIQWGAIG 1948 (2376)
T ss_pred ---CcccccchhhHHHHHHHHHhhhcCCCcceeeeeccc
Confidence 3456799999999999863 78888877776663
|
|
| >PRK00048 dihydrodipicolinate reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0049 Score=59.66 Aligned_cols=66 Identities=21% Similarity=0.227 Sum_probs=45.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|.|+|++|.+|+.+++.+.+. +++++.+. ++.++... . ...++...++++
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~~~~~elvav~d~~~~~~~~------------------------~--~~~~i~~~~dl~ 55 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEAAEDLELVAAVDRPGSPLVG------------------------Q--GALGVAITDDLE 55 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCccccc------------------------c--CCCCccccCCHH
Confidence 68999999999999999998875 68887744 44432211 0 112333345567
Q ss_pred HHhcCCCEEEEccc
Q 013273 159 PALGNASVVICCIG 172 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag 172 (446)
+++.++|+||++..
T Consensus 56 ~ll~~~DvVid~t~ 69 (257)
T PRK00048 56 AVLADADVLIDFTT 69 (257)
T ss_pred HhccCCCEEEECCC
Confidence 77778999998864
|
|
| >TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0014 Score=65.98 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=58.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEE---EEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVR---AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~---~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+|+|.||||++|+.|++.|.++||.++ .+.+..+....+ ...+...+..|+. .
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~~~~hp~~~l~~~as~~~~g~~~-------------------~~~~~~~~~~~~~-----~ 56 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILEERNFPIDKLVLLASDRSAGRKV-------------------TFKGKELEVNEAK-----I 56 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHHhCCCChhhEEEEeccccCCCee-------------------eeCCeeEEEEeCC-----h
Confidence 489999999999999999999887643 444654322211 0122445555663 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
..+.++|+||.++|... +..++..+.+.|+ ++|=.|+
T Consensus 57 ~~~~~~D~v~~a~g~~~----------------s~~~a~~~~~~G~-~VID~ss 93 (339)
T TIGR01296 57 ESFEGIDIALFSAGGSV----------------SKEFAPKAAKCGA-IVIDNTS 93 (339)
T ss_pred HHhcCCCEEEECCCHHH----------------HHHHHHHHHHCCC-EEEECCH
Confidence 23578999999987521 4445555666676 5665565
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978. |
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0037 Score=61.37 Aligned_cols=77 Identities=21% Similarity=0.194 Sum_probs=55.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|+|.| +|+.|+.++..|++.|. +|+++.|+.++.+.+.+.+... ..+.. +...+++
T Consensus 124 ~~k~vlvlG-aGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~--------------~~~~~----~~~~~~~ 184 (282)
T TIGR01809 124 AGFRGLVIG-AGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQV--------------GVITR----LEGDSGG 184 (282)
T ss_pred CCceEEEEc-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhc--------------Cccee----ccchhhh
Confidence 467899999 59999999999999995 7999999999988877654321 11111 1111234
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
...+..+|+|||+....
T Consensus 185 ~~~~~~~DiVInaTp~g 201 (282)
T TIGR01809 185 LAIEKAAEVLVSTVPAD 201 (282)
T ss_pred hhcccCCCEEEECCCCC
Confidence 45567899999997653
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK10669 putative cation:proton antiport protein; Provisional | Back alignment and domain information |
|---|
Probab=96.98 E-value=0.0068 Score=65.35 Aligned_cols=73 Identities=25% Similarity=0.238 Sum_probs=60.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+.+|+|.| .|.+|+++++.|.++|++|+++++++++.+.+.+ .+...+.+|.+|++.+++
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~~~-------------------~g~~~i~GD~~~~~~L~~ 476 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLLAAGIPLVVIETSRTRVDELRE-------------------RGIRAVLGNAANEEIMQL 476 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------CCCeEEEcCCCCHHHHHh
Confidence 35799999 6999999999999999999999999887766532 468899999999998886
Q ss_pred H-hcCCCEEEEccc
Q 013273 160 A-LGNASVVICCIG 172 (446)
Q Consensus 160 a-~~~~D~VI~~Ag 172 (446)
+ ++++|+||-+.+
T Consensus 477 a~i~~a~~viv~~~ 490 (558)
T PRK10669 477 AHLDCARWLLLTIP 490 (558)
T ss_pred cCccccCEEEEEcC
Confidence 5 478998876643
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0042 Score=61.17 Aligned_cols=70 Identities=24% Similarity=0.290 Sum_probs=52.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++|+|. |.+|+.+++.|...|++|++.+|+.++.....+ .+...+ +.+.+
T Consensus 149 l~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~~-------------------~g~~~~-----~~~~l 203 (287)
T TIGR02853 149 IHGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARITE-------------------MGLIPF-----PLNKL 203 (287)
T ss_pred CCCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------CCCeee-----cHHHH
Confidence 45789999995 999999999999999999999999865443211 112221 23456
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
.+++.++|+|||+..
T Consensus 204 ~~~l~~aDiVint~P 218 (287)
T TIGR02853 204 EEKVAEIDIVINTIP 218 (287)
T ss_pred HHHhccCCEEEECCC
Confidence 778899999999874
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0037 Score=63.79 Aligned_cols=75 Identities=19% Similarity=0.199 Sum_probs=57.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
...+|+|+|+ |.+|+.+++.|...|.+|++++|+.++.+.+.+.+ .. .+..+..+.+.+.
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~-----------------g~--~v~~~~~~~~~l~ 225 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEF-----------------GG--RIHTRYSNAYEIE 225 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhc-----------------Cc--eeEeccCCHHHHH
Confidence 3467999985 99999999999999999999999987765543211 11 1234556677788
Q ss_pred HHhcCCCEEEEcccC
Q 013273 159 PALGNASVVICCIGA 173 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~ 173 (446)
+.+.++|+||++++.
T Consensus 226 ~~l~~aDvVI~a~~~ 240 (370)
T TIGR00518 226 DAVKRADLLIGAVLI 240 (370)
T ss_pred HHHccCCEEEEcccc
Confidence 899999999999865
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.021 Score=53.95 Aligned_cols=109 Identities=24% Similarity=0.239 Sum_probs=72.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchh-------------------HHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR-------------------AENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~-------------------~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| -|++|++.+++|++.| -++++++-+.=. .+.+.+.+...
T Consensus 28 l~~~~V~VvG-iGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~I---------- 96 (263)
T COG1179 28 LKQAHVCVVG-IGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQI---------- 96 (263)
T ss_pred HhhCcEEEEe-cCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhh----------
Confidence 3456899999 5999999999999999 467777654322 22222222221
Q ss_pred CCCCCceEEEE-cCCCChhcHHHHh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVE-CDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~-~Dl~d~~~~~~a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+..++.. -|+-+++.+++++ .++|+||.+.- |+..-..|+..|.+++. . ++||+|+
T Consensus 97 ---nP~c~V~~~~~f~t~en~~~~~~~~~DyvIDaiD---------------~v~~Kv~Li~~c~~~ki-~--vIss~Ga 155 (263)
T COG1179 97 ---NPECEVTAINDFITEENLEDLLSKGFDYVIDAID---------------SVRAKVALIAYCRRNKI-P--VISSMGA 155 (263)
T ss_pred ---CCCceEeehHhhhCHhHHHHHhcCCCCEEEEchh---------------hhHHHHHHHHHHHHcCC-C--EEeeccc
Confidence 14444433 3555677788777 46999999852 46667789999999876 3 4677766
Q ss_pred cCC
Q 013273 216 NKF 218 (446)
Q Consensus 216 ~~~ 218 (446)
...
T Consensus 156 g~k 158 (263)
T COG1179 156 GGK 158 (263)
T ss_pred cCC
Confidence 443
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0047 Score=60.84 Aligned_cols=81 Identities=16% Similarity=0.156 Sum_probs=54.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc---hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~---~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+++++|.|+ |+.+++++..|+..|. +|+++.|+. ++++.+.+.+... ....+.+ .++.+
T Consensus 122 ~~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~------------~~~~~~~--~~~~~ 186 (288)
T PRK12749 122 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN------------TDCVVTV--TDLAD 186 (288)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhc------------cCceEEE--echhh
Confidence 35578999995 8889999999999994 899999985 4666665544221 0011222 23333
Q ss_pred hhcHHHHhcCCCEEEEcccC
Q 013273 154 RVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~ 173 (446)
...+.+.+.++|+|||+...
T Consensus 187 ~~~l~~~~~~aDivINaTp~ 206 (288)
T PRK12749 187 QQAFAEALASADILTNGTKV 206 (288)
T ss_pred hhhhhhhcccCCEEEECCCC
Confidence 33355567789999998653
|
|
| >COG2085 Predicted dinucleotide-binding enzymes [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0031 Score=58.52 Aligned_cols=68 Identities=22% Similarity=0.220 Sum_probs=46.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
||++.|.| +|.||..|++.|++.||+|++..|+.++ ...+.+.+. +. ....+.+
T Consensus 1 m~~~~i~G-tGniG~alA~~~a~ag~eV~igs~r~~~~~~a~a~~l~----------------~~--------i~~~~~~ 55 (211)
T COG2085 1 MMIIAIIG-TGNIGSALALRLAKAGHEVIIGSSRGPKALAAAAAALG----------------PL--------ITGGSNE 55 (211)
T ss_pred CcEEEEec-cChHHHHHHHHHHhCCCeEEEecCCChhHHHHHHHhhc----------------cc--------cccCChH
Confidence 35566555 9999999999999999999999666554 443333221 11 1234567
Q ss_pred HHhcCCCEEEEccc
Q 013273 159 PALGNASVVICCIG 172 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag 172 (446)
++++.+|+||-...
T Consensus 56 dA~~~aDVVvLAVP 69 (211)
T COG2085 56 DAAALADVVVLAVP 69 (211)
T ss_pred HHHhcCCEEEEecc
Confidence 77888899987753
|
|
| >PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0037 Score=61.44 Aligned_cols=89 Identities=18% Similarity=0.207 Sum_probs=56.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|.|.|+ |.+|..++..|+++|++|++++++++..+.+.+.+......+.. .+........-+...+.-..++.++
T Consensus 2 ~~V~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~i~~~~~~~~~ 78 (288)
T PRK09260 2 EKLVVVGA-GVMGRGIAYVFAVSGFQTTLVDIKQEQLESAQQEIASIFEQGVA--RGKLTEAARQAALARLSYSLDLKAA 78 (288)
T ss_pred cEEEEECc-cHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCCHHHHHHHHhCeEEeCcHHHh
Confidence 47999995 99999999999999999999999998887766554332111110 0000000000000011112346678
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||-|..
T Consensus 79 ~~~aD~Vi~avp 90 (288)
T PRK09260 79 VADADLVIEAVP 90 (288)
T ss_pred hcCCCEEEEecc
Confidence 899999999865
|
|
| >PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0062 Score=59.91 Aligned_cols=45 Identities=18% Similarity=0.115 Sum_probs=38.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK 125 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~ 125 (446)
.++|.|.|+ |.+|..++..|+..|++|++.+++++..+...+.++
T Consensus 5 ~~~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~~~~~~~~i~ 49 (286)
T PRK07819 5 IQRVGVVGA-GQMGAGIAEVCARAGVDVLVFETTEELATAGRNRIE 49 (286)
T ss_pred ccEEEEEcc-cHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHH
Confidence 358999995 999999999999999999999999988777555544
|
|
| >TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2 | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.02 Score=53.36 Aligned_cols=80 Identities=16% Similarity=0.262 Sum_probs=55.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC---chhH---------------HHHHHHHHHhhhcccccccCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRA---------------ENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~---~~~~---------------~~l~~~~~~~~l~~~~~~~g~ 138 (446)
....+|+|.| .|++|+.++..|++.|. +|++++++ .+.+ ..+.+.+.++
T Consensus 19 L~~~~V~IvG-~GglGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~~~~~~iG~~Ka~~~~~~l~~i----------- 86 (200)
T TIGR02354 19 LEQATVAICG-LGGLGSNVAINLARAGIGKLILVDFDVVEPSNLNRQQYKASQVGEPKTEALKENISEI----------- 86 (200)
T ss_pred HhCCcEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCEEcccccccccCChhhCCCHHHHHHHHHHHHH-----------
Confidence 4567899999 58999999999999997 69999887 2211 1122222222
Q ss_pred CCCCceEEEEcCCCChhcHHHHhcCCCEEEEc
Q 013273 139 QPVEMLELVECDLEKRVQIEPALGNASVVICC 170 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~ 170 (446)
.+.-+++.+..+++ .+.+.+++.++|+||.+
T Consensus 87 np~~~i~~~~~~i~-~~~~~~~~~~~DlVi~a 117 (200)
T TIGR02354 87 NPYTEIEAYDEKIT-EENIDKFFKDADIVCEA 117 (200)
T ss_pred CCCCEEEEeeeeCC-HhHHHHHhcCCCEEEEC
Confidence 11234556666665 45678889999999988
|
Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter. |
| >PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0044 Score=64.26 Aligned_cols=40 Identities=15% Similarity=0.065 Sum_probs=36.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
+++|.|.| .|++|..++..|++.|++|+++++++++.+.+
T Consensus 3 ~~kI~VIG-lG~~G~~~A~~La~~G~~V~~~D~~~~~v~~l 42 (415)
T PRK11064 3 FETISVIG-LGYIGLPTAAAFASRQKQVIGVDINQHAVDTI 42 (415)
T ss_pred ccEEEEEC-cchhhHHHHHHHHhCCCEEEEEeCCHHHHHHH
Confidence 47899999 79999999999999999999999999887764
|
|
| >cd01489 Uba2_SUMO Ubiquitin activating enzyme (E1) subunit UBA2 | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.018 Score=57.28 Aligned_cols=106 Identities=14% Similarity=0.191 Sum_probs=70.7
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+|||.| .|+||..+++.|+..| .++++++.+. .|.+.+.+.++++ .+.
T Consensus 1 kVlIVG-aGGlG~EiaKnLal~Gvg~ItIvD~D~Ve~sNLnRQflf~~~dVGk~Kaevaa~~l~~l-----------Np~ 68 (312)
T cd01489 1 KVLVVG-AGGIGCELLKNLVLTGFGEIHIIDLDTIDLSNLNRQFLFRKKHVGKSKAQVAKEAVLSF-----------NPN 68 (312)
T ss_pred CEEEEC-CCHHHHHHHHHHHHhcCCeEEEEcCCCcchhhcCcCccCChhHcCcHHHHHHHHHHHHH-----------CCC
Confidence 489999 5999999999999999 5777777542 2333334444333 122
Q ss_pred CceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
-+++.+..++.+.....+.+.++|+||++.- |...-..+-+.|...++ .||...+.|.
T Consensus 69 v~V~~~~~~i~~~~~~~~f~~~~DvVv~a~D---------------n~~ar~~in~~c~~~~i-p~I~~gt~G~ 126 (312)
T cd01489 69 VKIVAYHANIKDPDFNVEFFKQFDLVFNALD---------------NLAARRHVNKMCLAADV-PLIESGTTGF 126 (312)
T ss_pred CeEEEEeccCCCccchHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHCCC-CEEEEecCcc
Confidence 3566677778765444577899999998842 34444556677777775 6777766543
|
UBA2 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. UBA2 contains both the nucleotide-binding motif involved in adenylation and the catalytic cysteine involved in the thioester intermediate and Ublp transfer to E2. |
| >cd01484 E1-2_like Ubiquitin activating enzyme (E1), repeat 2-like | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.022 Score=54.25 Aligned_cols=106 Identities=11% Similarity=0.184 Sum_probs=69.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch-------------------hHHHHHHHHHHhhhcccccccCCCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~-------------------~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+|||.| .|++|..+++.|+..| -++++++.+.= |.+.+.+.++++ .+.
T Consensus 1 kVlvvG-~GGlG~eilk~La~~Gvg~i~ivD~D~Ve~sNLnRQflf~~~dvGk~Ka~va~~~l~~~-----------np~ 68 (234)
T cd01484 1 KVLLVG-AGGIGCELLKNLALMGFGQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKSEVAAEAVNDR-----------NPN 68 (234)
T ss_pred CEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCEEcchhhccccCCChhhCChHHHHHHHHHHHHH-----------CCC
Confidence 488999 6999999999999999 47888776532 222222222222 112
Q ss_pred CceEEEEcCCCChhcH-HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 142 EMLELVECDLEKRVQI-EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~-~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
-+++.+..++.+...+ ...++++|+||++.. |+..-..+-+.|.+.++ .+|..++.+.
T Consensus 69 v~i~~~~~~i~~~~~~~~~f~~~~DvVi~a~D---------------n~~aR~~ln~~c~~~~i-plI~~g~~G~ 127 (234)
T cd01484 69 CKVVPYQNKVGPEQDFNDTFFEQFHIIVNALD---------------NIIARRYVNGMLIFLIV-PLIESGTEGF 127 (234)
T ss_pred CEEEEEeccCChhhhchHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcccCC
Confidence 3466677777554333 456789999998842 45555556677777775 7887776543
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. A set of novel molecules with a structural similarity to Ub, called Ub-like proteins (Ubls), have similar conjugation cascades. In contrast to ubiquitin-E1, which is a single-chain protein with a weakly conserved two-fold repeat, many of the Ubls-E1are a heterodimer where each subunit corresponds to one half of a single-chain E1. This CD represents the family homologou |
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0032 Score=65.10 Aligned_cols=75 Identities=15% Similarity=0.296 Sum_probs=57.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.|+ |.+|+.++..|...| .+|+++.|+.+++..+.+.+ +...+ ...++
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~-----------------~~~~~-----~~~~~ 235 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAF-----------------RNASA-----HYLSE 235 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHh-----------------cCCeE-----ecHHH
Confidence 46789999995 999999999999999 57999999988887765532 11112 22355
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+.+.+..+|+||++.+...
T Consensus 236 l~~~l~~aDiVI~aT~a~~ 254 (414)
T PRK13940 236 LPQLIKKADIIIAAVNVLE 254 (414)
T ss_pred HHHHhccCCEEEECcCCCC
Confidence 6788899999999988643
|
|
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0078 Score=55.06 Aligned_cols=106 Identities=23% Similarity=0.307 Sum_probs=62.3
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCC-------CCceEEEEcCCCCh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP-------VEMLELVECDLEKR 154 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~-------~~~v~~v~~Dl~d~ 154 (446)
+|.|.|| |.+|+.++..++..|++|++++++++..+...+.+++. ++... ..|... ..++.+ .
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~~~i~~~-l~~~~-~~~~~~~~~~~~~~~~i~~-------~ 70 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERARKRIERL-LDRLV-RKGRLSQEEADAALARISF-------T 70 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHHHHHHHH-HHHHH-HTTTTTHHHHHHHHHTEEE-------E
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhhhHHHHH-Hhhhh-hhccchhhhhhhhhhhccc-------c
Confidence 5899996 99999999999999999999999998877766655541 10000 001000 122332 1
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+++++. ++|.||-+... ++..-+.+.....+.-...-|+.|+
T Consensus 71 ~dl~~~~-~adlViEai~E--------------~l~~K~~~~~~l~~~~~~~~ilasn 113 (180)
T PF02737_consen 71 TDLEEAV-DADLVIEAIPE--------------DLELKQELFAELDEICPPDTILASN 113 (180)
T ss_dssp SSGGGGC-TESEEEE-S-S--------------SHHHHHHHHHHHHCCS-TTSEEEE-
T ss_pred cCHHHHh-hhheehhhccc--------------cHHHHHHHHHHHHHHhCCCceEEec
Confidence 2345555 89999998642 3555566666666552233344444
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.0081 Score=65.30 Aligned_cols=73 Identities=14% Similarity=0.157 Sum_probs=61.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++|+|.| .|.+|+.+++.|.++|++++++++++++.+.+.+ .+..++.||.+|++.+++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~ 459 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLMANKMRITVLERDISAVNLMRK-------------------YGYKVYYGDATQLELLRA 459 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEeeCCCHHHHHh
Confidence 35799999 7999999999999999999999999987765532 457889999999998887
Q ss_pred H-hcCCCEEEEccc
Q 013273 160 A-LGNASVVICCIG 172 (446)
Q Consensus 160 a-~~~~D~VI~~Ag 172 (446)
+ ++++|+||-+.+
T Consensus 460 agi~~A~~vv~~~~ 473 (601)
T PRK03659 460 AGAEKAEAIVITCN 473 (601)
T ss_pred cCCccCCEEEEEeC
Confidence 6 578999998753
|
|
| >PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0075 Score=59.27 Aligned_cols=83 Identities=19% Similarity=0.144 Sum_probs=54.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCC--------CCceEEEEcCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP--------VEMLELVECDL 151 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~--------~~~v~~v~~Dl 151 (446)
.++|.|.| +|.+|..++..|++.|++|++++++++..+...+.++...-.... .+... ..++.+
T Consensus 3 ~~kIaViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~i~~----- 74 (287)
T PRK08293 3 IKNVTVAG-AGVLGSQIAFQTAFHGFDVTIYDISDEALEKAKERIAKLADRYVR--DLEATKEAPAEAALNRITL----- 74 (287)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHHHHHHHHH--cCCCChhhhHHHHHcCeEE-----
Confidence 35799999 599999999999999999999999988776665543221000000 00000 012221
Q ss_pred CChhcHHHHhcCCCEEEEccc
Q 013273 152 EKRVQIEPALGNASVVICCIG 172 (446)
Q Consensus 152 ~d~~~~~~a~~~~D~VI~~Ag 172 (446)
..+++++++++|+||.+..
T Consensus 75 --~~d~~~a~~~aDlVieavp 93 (287)
T PRK08293 75 --TTDLAEAVKDADLVIEAVP 93 (287)
T ss_pred --eCCHHHHhcCCCEEEEecc
Confidence 2346778899999999975
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.86 E-value=0.0089 Score=59.05 Aligned_cols=42 Identities=33% Similarity=0.416 Sum_probs=36.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+++|+||+|.+|..+++.+...|.+|++++|++++.+.+
T Consensus 162 ~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~ 203 (332)
T cd08259 162 KGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL 203 (332)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH
Confidence 356899999999999999999999999999999887665443
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >PRK07878 molybdopterin biosynthesis-like protein MoeZ; Validated | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.018 Score=59.32 Aligned_cols=109 Identities=19% Similarity=0.230 Sum_probs=70.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..++..|+..|. ++++++.+. .|...+.+.++++
T Consensus 40 L~~~~VlviG-~GGlGs~va~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~diG~~Ka~~a~~~l~~~---------- 108 (392)
T PRK07878 40 LKNARVLVIG-AGGLGSPTLLYLAAAGVGTLGIVEFDVVDESNLQRQVIHGQSDVGRSKAQSARDSIVEI---------- 108 (392)
T ss_pred HhcCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCCEecCcccccccccChhcCCChHHHHHHHHHHHh----------
Confidence 4456899999 69999999999999994 677777542 1222333333332
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+..+++. +.+.+.+.++|+||.|.. |...-..+-++|.+.++ .||+.+..+.
T Consensus 109 -np~v~i~~~~~~i~~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~~-p~v~~~~~g~ 168 (392)
T PRK07878 109 -NPLVNVRLHEFRLDP-SNAVELFSQYDLILDGTD---------------NFATRYLVNDAAVLAGK-PYVWGSIYRF 168 (392)
T ss_pred -CCCcEEEEEeccCCh-hHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEeccC
Confidence 112345555556653 456778899999998852 23333345577778775 6888766543
|
|
| >TIGR01771 L-LDH-NAD L-lactate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.011 Score=58.51 Aligned_cols=111 Identities=18% Similarity=0.164 Sum_probs=76.5
Q ss_pred EECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 85 VAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 85 VtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|.| .|.||..++..|+..| .++++++++.+++.....++..... .....+.+..+| .+.++
T Consensus 1 iIG-aG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~---------~~~~~~~i~~~~-------~~~~~ 63 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLNQGIADEIVLIDINKDKAEGEAMDLQHAAS---------FLPTPKKIRSGD-------YSDCK 63 (299)
T ss_pred CCC-cCHHHHHHHHHHHhcCCCCEEEEEeCCCChhhHHHHHHHHhhc---------ccCCCeEEecCC-------HHHHC
Confidence 456 5999999999999887 4799999988877766555554310 011223333222 35788
Q ss_pred CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 163 NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 163 ~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
++|+||-.||.......+....+..|......+++.+++++-+ .+|.+|.
T Consensus 64 daDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~~p~~~vivvsN 114 (299)
T TIGR01771 64 DADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKSGFDGIFLVATN 114 (299)
T ss_pred CCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 9999999999765544444455778999999999999887544 4555553
|
This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases. |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0061 Score=59.85 Aligned_cols=78 Identities=21% Similarity=0.262 Sum_probs=54.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++++|.| +|+.|++++..|++.|. +|+++.|+.++.+.+.+.+... .+...+...|+ ..+
T Consensus 126 ~~k~vlilG-aGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~-------------~~~~~~~~~~~---~~~ 188 (283)
T PRK14027 126 KLDSVVQVG-AGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNA-------------VGREAVVGVDA---RGI 188 (283)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhc-------------cCcceEEecCH---hHH
Confidence 457899999 59999999999999995 7999999999988887654321 01111111222 223
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
...+..+|+|||+...
T Consensus 189 ~~~~~~~divINaTp~ 204 (283)
T PRK14027 189 EDVIAAADGVVNATPM 204 (283)
T ss_pred HHHHhhcCEEEEcCCC
Confidence 4445679999999754
|
|
| >COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.009 Score=60.34 Aligned_cols=113 Identities=23% Similarity=0.179 Sum_probs=71.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceE-EEEcC-----CCCh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-LVECD-----LEKR 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~-~v~~D-----l~d~ 154 (446)
|+|.|.| +|++|.-..-.|++.||+|++++.++++.+.+++... ....++++ +++-+ |.=.
T Consensus 1 MkI~viG-tGYVGLv~g~~lA~~GHeVv~vDid~~KV~~ln~g~~------------PI~EpgLe~ll~~~~~~gRl~fT 67 (414)
T COG1004 1 MKITVIG-TGYVGLVTGACLAELGHEVVCVDIDESKVELLNKGIS------------PIYEPGLEELLKENLASGRLRFT 67 (414)
T ss_pred CceEEEC-CchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHhCCCC------------CCcCccHHHHHHhccccCcEEEE
Confidence 6799999 8999999999999999999999999999877654110 00011111 11111 1113
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.+.++++.++|++|-+.|....... ..|......+++...++..+ ++|.+=|
T Consensus 68 td~~~a~~~adv~fIavgTP~~~dg------~aDl~~V~ava~~i~~~~~~~~vvV~KS 120 (414)
T COG1004 68 TDYEEAVKDADVVFIAVGTPPDEDG------SADLSYVEAVAKDIGEILDGKAVVVIKS 120 (414)
T ss_pred cCHHHHHhcCCEEEEEcCCCCCCCC------CccHHHHHHHHHHHHhhcCCCeEEEEcC
Confidence 4577888999999999886443211 22455555555555554222 4554433
|
|
| >PLN02383 aspartate semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.0065 Score=61.30 Aligned_cols=94 Identities=17% Similarity=0.166 Sum_probs=56.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++|.|.||||++|+.|++.|.+++| ++..+....+.-+.+ ...+.++...++.
T Consensus 7 ~~kVaVvGAtG~vG~eLlrlL~~~~hP~~~l~~las~rsaGk~~-------------------~~~~~~~~v~~~~---- 63 (344)
T PLN02383 7 GPSVAIVGVTGAVGQEFLSVLTDRDFPYSSLKMLASARSAGKKV-------------------TFEGRDYTVEELT---- 63 (344)
T ss_pred CCeEEEEcCCChHHHHHHHHHHhCCCCcceEEEEEccCCCCCee-------------------eecCceeEEEeCC----
Confidence 46899999999999999999999876 444443322110000 0011222222332
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.+.++|+||.+++... ...++..+.+.|+ ++|=.|+..
T Consensus 64 -~~~~~~~D~vf~a~p~~~----------------s~~~~~~~~~~g~-~VIDlS~~f 103 (344)
T PLN02383 64 -EDSFDGVDIALFSAGGSI----------------SKKFGPIAVDKGA-VVVDNSSAF 103 (344)
T ss_pred -HHHHcCCCEEEECCCcHH----------------HHHHHHHHHhCCC-EEEECCchh
Confidence 134578999999886521 4455555556665 677777754
|
|
| >PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.0078 Score=60.96 Aligned_cols=37 Identities=35% Similarity=0.303 Sum_probs=31.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQR 116 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~ 116 (446)
+++|+|+||||++|+.|++.|.+.. .+++++.++.+.
T Consensus 3 ~~~V~I~GatG~iG~~l~~~L~~~p~~el~~~~~s~~~ 40 (349)
T PRK08664 3 KLKVGILGATGMVGQRFVQLLANHPWFEVTALAASERS 40 (349)
T ss_pred CcEEEEECCCCHHHHHHHHHHHcCCCceEEEEEcChhh
Confidence 5789999999999999999999875 488888666543
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.008 Score=59.44 Aligned_cols=70 Identities=20% Similarity=0.309 Sum_probs=52.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|. |.+|+.++..|...|++|++++|+..+...... -+..++ +.+.+
T Consensus 150 l~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~~-------------------~G~~~~-----~~~~l 204 (296)
T PRK08306 150 IHGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARITE-------------------MGLSPF-----HLSEL 204 (296)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------cCCeee-----cHHHH
Confidence 35689999995 899999999999999999999999765433211 122322 23456
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
.+.+.++|+|||+++
T Consensus 205 ~~~l~~aDiVI~t~p 219 (296)
T PRK08306 205 AEEVGKIDIIFNTIP 219 (296)
T ss_pred HHHhCCCCEEEECCC
Confidence 778899999999864
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.0076 Score=56.09 Aligned_cols=44 Identities=23% Similarity=0.278 Sum_probs=37.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
...+++|+|.|. |.+|+++++.|.+.|++|++.+++.++...+.
T Consensus 25 ~l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~ 68 (200)
T cd01075 25 SLEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAA 68 (200)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH
Confidence 356789999995 89999999999999999999999876655543
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.01 Score=59.00 Aligned_cols=42 Identities=24% Similarity=0.231 Sum_probs=36.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+|||+||+|.||..+++.+...|.+|+++++++++.+.+
T Consensus 138 ~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~ 179 (325)
T TIGR02825 138 GGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL 179 (325)
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 457999999999999999999888999999999988776554
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.011 Score=58.74 Aligned_cols=43 Identities=16% Similarity=0.057 Sum_probs=37.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
.++|.|.| .|.+|..++..|++.|++|++++++.+..+.+.+.
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~~~g~~V~~~d~~~~~~~~~~~~ 46 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFARKGLQVVLIDVMEGALERARGV 46 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH
Confidence 46899998 59999999999999999999999999887776654
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.005 Score=63.90 Aligned_cols=73 Identities=33% Similarity=0.484 Sum_probs=55.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.|+ |.+|+.+++.|...| .+|++++|+.++...+.+.+ + ...+ +.++
T Consensus 178 l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~------------g------~~~i-----~~~~ 233 (417)
T TIGR01035 178 LKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKEL------------G------GEAV-----KFED 233 (417)
T ss_pred ccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------------C------CeEe-----eHHH
Confidence 45679999995 999999999999999 78999999988766554321 1 1112 2245
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+++.++|+||.+.+..
T Consensus 234 l~~~l~~aDvVi~aT~s~ 251 (417)
T TIGR01035 234 LEEYLAEADIVISSTGAP 251 (417)
T ss_pred HHHHHhhCCEEEECCCCC
Confidence 777888999999997653
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PRK07877 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.022 Score=62.69 Aligned_cols=106 Identities=18% Similarity=0.192 Sum_probs=72.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCc------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.|. | +|..++..|+..|. ++++++.+. .|...+.+.+.++
T Consensus 105 L~~~~V~IvG~-G-lGs~~a~~LaraGvvG~l~lvD~D~ve~sNLnRq~~~~~diG~~Kv~~a~~~l~~i---------- 172 (722)
T PRK07877 105 LGRLRIGVVGL-S-VGHAIAHTLAAEGLCGELRLADFDTLELSNLNRVPAGVFDLGVNKAVVAARRIAEL---------- 172 (722)
T ss_pred HhcCCEEEEEe-c-HHHHHHHHHHHccCCCeEEEEcCCEEcccccccccCChhhcccHHHHHHHHHHHHH----------
Confidence 45678999998 7 99999999999994 888888642 2223333333322
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+|+.+...++ .+.+.++++++|+||.|.- |+..=..+-++|.++++ .+|+-++.
T Consensus 173 -np~i~v~~~~~~i~-~~n~~~~l~~~DlVvD~~D---------------~~~~R~~ln~~a~~~~i-P~i~~~~~ 230 (722)
T PRK07877 173 -DPYLPVEVFTDGLT-EDNVDAFLDGLDVVVEECD---------------SLDVKVLLREAARARRI-PVLMATSD 230 (722)
T ss_pred -CCCCEEEEEeccCC-HHHHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEcCC
Confidence 22346777777776 5778899999999999952 23333345577777776 67776653
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.69 E-value=0.0058 Score=63.56 Aligned_cols=73 Identities=27% Similarity=0.444 Sum_probs=55.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.|+ |.+|+.+++.|...|. +|++++|+.++...+.+.+ | . +..+.++
T Consensus 180 ~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~------------g------~-----~~~~~~~ 235 (423)
T PRK00045 180 LSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEF------------G------G-----EAIPLDE 235 (423)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHc------------C------C-----cEeeHHH
Confidence 45679999995 9999999999999996 8999999988776654421 1 1 1222345
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+++.++|+||.+.|..
T Consensus 236 ~~~~l~~aDvVI~aT~s~ 253 (423)
T PRK00045 236 LPEALAEADIVISSTGAP 253 (423)
T ss_pred HHHHhccCCEEEECCCCC
Confidence 677788999999998753
|
|
| >PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ] | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.0079 Score=51.47 Aligned_cols=94 Identities=21% Similarity=0.267 Sum_probs=56.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLK-LGFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~-~G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+|.|++|.+|+.+++.+.+ .|+++.. ++|+.+.... +.+... .+.. ...+.-.++++
T Consensus 1 mrV~i~G~~GrMG~~i~~~i~~~~~~~lv~~v~~~~~~~~g--~d~g~~--------~~~~--------~~~~~v~~~l~ 62 (124)
T PF01113_consen 1 MRVGIVGASGRMGRAIAEAILESPGFELVGAVDRKPSAKVG--KDVGEL--------AGIG--------PLGVPVTDDLE 62 (124)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSTTEEEEEEEETTTSTTTT--SBCHHH--------CTSS--------T-SSBEBS-HH
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCCcEEEEEEecCCccccc--chhhhh--------hCcC--------CcccccchhHH
Confidence 4799999999999999999999 6788665 5555421110 000000 0000 01111125678
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
+++..+|+||.+. +-.++...++.|.++++ ++|.
T Consensus 63 ~~~~~~DVvIDfT----------------~p~~~~~~~~~~~~~g~-~~Vi 96 (124)
T PF01113_consen 63 ELLEEADVVIDFT----------------NPDAVYDNLEYALKHGV-PLVI 96 (124)
T ss_dssp HHTTH-SEEEEES-----------------HHHHHHHHHHHHHHT--EEEE
T ss_pred HhcccCCEEEEcC----------------ChHHhHHHHHHHHhCCC-CEEE
Confidence 8888899999985 23457778888888876 5553
|
In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A .... |
| >PF10100 DUF2338: Uncharacterized protein conserved in bacteria (DUF2338); InterPro: IPR016935 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=96.68 E-value=0.14 Score=51.97 Aligned_cols=193 Identities=15% Similarity=0.098 Sum_probs=118.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-----
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK----- 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d----- 153 (446)
|.+|||.| ||=++.+|+.-|-+.+ ++|=++.|...+.+.+.+.+.+- -..+..++.+
T Consensus 1 m~~VLI~G-tGPvAiQLAv~lk~~~~~~vGi~~R~S~rSq~f~~aL~~~----------------~~~~~v~vqn~~h~~ 63 (429)
T PF10100_consen 1 MGNVLIVG-TGPVAIQLAVILKKHGNCRVGIVGRESVRSQRFFEALARS----------------DGLFEVSVQNEQHQA 63 (429)
T ss_pred CCceEEEc-CCHHHHHHHHHHHhccCceeeeecCcchhHHHHHHHHHhC----------------CCEEEEeecchhhhh
Confidence 45799999 8999999999998876 57999999888888888777642 0111222221
Q ss_pred ----------hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHH---HhCCCCEEEEEccccccCCCC
Q 013273 154 ----------RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA---TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 154 ----------~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa---~~~~v~r~V~vSS~~~~~~~~ 220 (446)
...++++.+.+|.+|-+.... +-..+++.. .-.+++++|.+|...+
T Consensus 64 l~G~~~id~~~~~~~~i~g~WdtlILavtaD----------------AY~~VL~ql~~~~L~~vk~iVLvSPtfG----- 122 (429)
T PF10100_consen 64 LSGECTIDHVFQDYEEIEGEWDTLILAVTAD----------------AYLDVLQQLPWEVLKRVKSIVLVSPTFG----- 122 (429)
T ss_pred hcCeEEhhHhhcCHHHhcccccEEEEEechH----------------HHHHHHHhcCHHHHhhCCEEEEECcccc-----
Confidence 123444456788888875431 122222222 2237899999997543
Q ss_pred chhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccc-eeec--ccCcc-------------------
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHN-ITLS--QEDTL------------------- 278 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~--~~~~~------------------- 278 (446)
|...++.++.+.|....||-.+.-||.......... ..+. ....+
T Consensus 123 -------------S~~lv~~~l~~~~~~~EVISFStY~gdTr~~d~~~~~~vlt~~vK~kiYigSt~~~s~~~~~l~~~~ 189 (429)
T PF10100_consen 123 -------------SHLLVKGFLNDLGPDAEVISFSTYYGDTRWSDGEQPNRVLTTAVKKKIYIGSTHSNSPELDKLCRLL 189 (429)
T ss_pred -------------hHHHHHHHHHhcCCCceEEEeecccccceeccCCCcceehhhhhhceEEEEeCCCCChHHHHHHHHH
Confidence 456777888888888888888888886532211100 0000 00000
Q ss_pred --------------------cCCccCHH-HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHH
Q 013273 279 --------------------FGGQVSNL-QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323 (446)
Q Consensus 279 --------------------~~~~v~~~-DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~ 323 (446)
..-+||+. =+.+.-+.++..+.....-+|-+.-++++|..-+.++
T Consensus 190 ~~~gI~~~~~~~pl~AE~rNislYVHpplfmndfsL~aIF~~~~~~kYvYKL~PEGPIT~~~I~~M 255 (429)
T PF10100_consen 190 AQLGIQLEVMDNPLEAESRNISLYVHPPLFMNDFSLNAIFEEDGVPKYVYKLFPEGPITPTLIRDM 255 (429)
T ss_pred HHcCCeEEEeCChHhhhhcccceecCChHhhChhhHHHHhCCCCCcceEEecCCCCCCCHHHHHHH
Confidence 00135542 2445555556555545677999999999987555554
|
|
| >PRK08057 cobalt-precorrin-6x reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.67 E-value=0.028 Score=54.07 Aligned_cols=95 Identities=12% Similarity=0.020 Sum_probs=72.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|||.|||+ =|+.|++.|.+.|++|++.+-..-.. .....+.+..+-+.|.+.+.+
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~~~g~~v~~Svat~~g~---------------------~~~~~~~v~~G~l~~~~~l~~ 59 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALAAAGVDIVLSLAGRTGG---------------------PADLPGPVRVGGFGGAEGLAA 59 (248)
T ss_pred CceEEEEechH-HHHHHHHHHHhCCCeEEEEEccCCCC---------------------cccCCceEEECCCCCHHHHHH
Confidence 46899999997 69999999999999988876655221 112467888899888999999
Q ss_pred Hhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
.+. ++++||+..-.. . ...+.++.++|++.++..+=|
T Consensus 60 ~l~~~~i~~VIDATHPf-----------A--~~is~~a~~ac~~~~ipyiR~ 98 (248)
T PRK08057 60 YLREEGIDLVIDATHPY-----------A--AQISANAAAACRALGIPYLRL 98 (248)
T ss_pred HHHHCCCCEEEECCCcc-----------H--HHHHHHHHHHHHHhCCcEEEE
Confidence 984 799999985432 2 345788999999988864433
|
|
| >TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.08 Score=55.50 Aligned_cols=91 Identities=13% Similarity=0.159 Sum_probs=63.4
Q ss_pred CCCCEEEEECCC---cHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 78 KDDNLAFVAGAT---GKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 78 ~~~~~VlVtGat---G~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
+..++|.|.|++ |.+|..+++.|.+.|+ +|+.+..+.... .+ +.
T Consensus 5 ~~p~siavvGaS~~~~~~g~~~~~~l~~~gf~g~v~~Vnp~~~~i------------------------~G-------~~ 53 (447)
T TIGR02717 5 FNPKSVAVIGASRDPGKVGYAIMKNLIEGGYKGKIYPVNPKAGEI------------------------LG-------VK 53 (447)
T ss_pred cCCCEEEEEccCCCCCchHHHHHHHHHhCCCCCcEEEECCCCCcc------------------------CC-------cc
Confidence 456789999998 7799999999999997 677665443210 11 11
Q ss_pred ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
-..++.++-..+|.+|-+... ..+..+++.|.+.|++.+|.+|+...
T Consensus 54 ~~~sl~~lp~~~Dlavi~vp~----------------~~~~~~l~e~~~~gv~~~vi~s~gf~ 100 (447)
T TIGR02717 54 AYPSVLEIPDPVDLAVIVVPA----------------KYVPQVVEECGEKGVKGAVVITAGFK 100 (447)
T ss_pred ccCCHHHCCCCCCEEEEecCH----------------HHHHHHHHHHHhcCCCEEEEECCCcc
Confidence 223445544678988877543 33667888888899999999887543
|
Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff. |
| >cd01491 Ube1_repeat1 Ubiquitin activating enzyme (E1), repeat 1 | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.031 Score=54.87 Aligned_cols=105 Identities=16% Similarity=0.221 Sum_probs=69.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
+...+|||.| .|++|..+++.|+..| .+|++++.+. .+++...+.++++
T Consensus 17 L~~s~VLIvG-~gGLG~EiaKnLalaGVg~itI~D~d~ve~snL~rqf~~~~~dIGk~Kaea~~~~L~eL---------- 85 (286)
T cd01491 17 LQKSNVLISG-LGGLGVEIAKNLILAGVKSVTLHDTKPCSWSDLSSQFYLREEDIGKNRAEASQARLAEL---------- 85 (286)
T ss_pred HhcCcEEEEc-CCHHHHHHHHHHHHcCCCeEEEEcCCccchhhcccCccCChHHhCHHHHHHHHHHHHHH----------
Confidence 4456899999 6899999999999999 4677777542 2333344444433
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+..++. .+.+.++|+||.+.. |......+-++|+++++ .||+..+.+.
T Consensus 86 -Np~V~V~~~~~~~~-----~~~l~~fdvVV~~~~---------------~~~~~~~in~~c~~~~i-pfI~a~~~G~ 141 (286)
T cd01491 86 -NPYVPVTVSTGPLT-----TDELLKFQVVVLTDA---------------SLEDQLKINEFCHSPGI-KFISADTRGL 141 (286)
T ss_pred -CCCCEEEEEeccCC-----HHHHhcCCEEEEecC---------------CHHHHHHHHHHHHHcCC-EEEEEecccc
Confidence 22234555554432 356788999998842 23444566688888886 8888887655
|
E1, a highly conserved small protein present universally in eukaryotic cells, is part of cascade to attach ubiquitin (Ub) covalently to substrate proteins. This cascade consists of activating (E1), conjugating (E2), and/or ligating (E3) enzymes and then targets them for degradation by the 26S proteasome. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and ubiquitin's C-terminus. E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Ubiquitin-E1 is a single-chain protein with a weakly conserved two-fold repeat. This CD represents the first repeat of Ub-E1. |
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.0059 Score=60.82 Aligned_cols=73 Identities=29% Similarity=0.403 Sum_probs=55.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.|+ |.+|+.+++.|...| .+|++++|+.++...+.+.+ | ..++ +.++
T Consensus 176 l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~la~~~------------g------~~~~-----~~~~ 231 (311)
T cd05213 176 LKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERAEELAKEL------------G------GNAV-----PLDE 231 (311)
T ss_pred ccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHc------------C------CeEE-----eHHH
Confidence 35789999995 999999999999876 78999999988877665432 1 1222 2345
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+++..+|+||.+.+..
T Consensus 232 ~~~~l~~aDvVi~at~~~ 249 (311)
T cd05213 232 LLELLNEADVVISATGAP 249 (311)
T ss_pred HHHHHhcCCEEEECCCCC
Confidence 677788899999998753
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >TIGR03026 NDP-sugDHase nucleotide sugar dehydrogenase | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.012 Score=60.89 Aligned_cols=40 Identities=25% Similarity=0.214 Sum_probs=35.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
|+|.|.| .|.+|..++..|++.|++|++++|+.++.+.+.
T Consensus 1 mkI~vIG-lG~~G~~lA~~La~~G~~V~~~d~~~~~v~~l~ 40 (411)
T TIGR03026 1 MKIAVIG-LGYVGLPLAALLADLGHEVTGVDIDQEKVDKLN 40 (411)
T ss_pred CEEEEEC-CCchhHHHHHHHHhcCCeEEEEECCHHHHHHhh
Confidence 4799998 799999999999999999999999998877654
|
All of these enzymes contain three Pfam domains, pfam03721, pfam00984, and pfam03720 for the N-terminal, central, and C-terminal regions respectively. |
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0098 Score=54.20 Aligned_cols=71 Identities=21% Similarity=0.251 Sum_probs=51.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|.|.| .|.||+++++.|..-|.+|++.+|.......... ..+ ...+
T Consensus 33 ~l~g~tvgIiG-~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~~-------------------~~~--------~~~~ 84 (178)
T PF02826_consen 33 ELRGKTVGIIG-YGRIGRAVARRLKAFGMRVIGYDRSPKPEEGADE-------------------FGV--------EYVS 84 (178)
T ss_dssp -STTSEEEEES-TSHHHHHHHHHHHHTT-EEEEEESSCHHHHHHHH-------------------TTE--------EESS
T ss_pred ccCCCEEEEEE-EcCCcCeEeeeeecCCceeEEecccCChhhhccc-------------------ccc--------eeee
Confidence 35678999999 7999999999999999999999999875441110 111 1346
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+++++..+|+|+++...+.
T Consensus 85 l~ell~~aDiv~~~~plt~ 103 (178)
T PF02826_consen 85 LDELLAQADIVSLHLPLTP 103 (178)
T ss_dssp HHHHHHH-SEEEE-SSSST
T ss_pred hhhhcchhhhhhhhhcccc
Confidence 7888999999999987644
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.016 Score=63.21 Aligned_cols=72 Identities=24% Similarity=0.260 Sum_probs=61.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++|+|.| .|.+|+.+++.|.++|++++++++++++.+.+.+ .+..++.+|.+|++.+++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~~~-------------------~g~~v~~GDat~~~~L~~ 459 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLLSSGVKMTVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLES 459 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHHhCCCCEEEEECCHHHHHHHHh-------------------cCCeEEEEeCCCHHHHHh
Confidence 35799999 6999999999999999999999999988776532 457889999999998876
Q ss_pred H-hcCCCEEEEcc
Q 013273 160 A-LGNASVVICCI 171 (446)
Q Consensus 160 a-~~~~D~VI~~A 171 (446)
+ ++++|.||.+.
T Consensus 460 agi~~A~~vvv~~ 472 (621)
T PRK03562 460 AGAAKAEVLINAI 472 (621)
T ss_pred cCCCcCCEEEEEe
Confidence 5 57899999875
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.016 Score=58.04 Aligned_cols=43 Identities=26% Similarity=0.268 Sum_probs=37.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
..+.+|||+||+|.+|..+++.+...|.+|++++++.++.+.+
T Consensus 150 ~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~ 192 (338)
T cd08295 150 KKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLL 192 (338)
T ss_pred CCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 3467999999999999999999989999999999988776554
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.015 Score=58.05 Aligned_cols=86 Identities=19% Similarity=0.132 Sum_probs=55.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++|.|.| +|-+|..++..|+..|++|++.+++++......+.+++. ++... ..+.. . ......+.-..++++
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a~aG~~V~l~D~~~~~~~~~~~~i~~~-~~~~~-~~~~~--~--~~~~~~i~~~~~l~~ 79 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARALAHGLDVVAWDPAPGAEAALRANVANA-WPALE-RQGLA--P--GASPARLRFVATIEA 79 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHH-HHHHH-HcCCC--h--hhHHhhceecCCHHH
Confidence 36899999 699999999999999999999999987766554444321 00000 00000 0 000012222235778
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
++.++|.||-++.
T Consensus 80 av~~aDlViEavp 92 (321)
T PRK07066 80 CVADADFIQESAP 92 (321)
T ss_pred HhcCCCEEEECCc
Confidence 8999999999864
|
|
| >PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0059 Score=65.24 Aligned_cols=44 Identities=30% Similarity=0.339 Sum_probs=38.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
..+++++|+|+ |++|++++..|++.|++|+++.|+.++.+.+.+
T Consensus 377 ~~~k~vlIlGa-GGagrAia~~L~~~G~~V~i~nR~~e~a~~la~ 420 (529)
T PLN02520 377 LAGKLFVVIGA-GGAGKALAYGAKEKGARVVIANRTYERAKELAD 420 (529)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH
Confidence 45679999997 899999999999999999999999887776654
|
|
| >PRK14851 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.039 Score=60.53 Aligned_cols=108 Identities=13% Similarity=0.217 Sum_probs=71.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|+||..++..|+..|. ++++++.+. .|...+.+.++++
T Consensus 41 L~~~~VlIvG-~GGlGs~va~~Lar~GVG~l~LvD~D~ve~sNLNRQ~~~~~~dvG~~Kv~v~~~~l~~i---------- 109 (679)
T PRK14851 41 LAEAKVAIPG-MGGVGGVHLITMVRTGIGRFHIADFDQFEPVNVNRQFGARVPSFGRPKLAVMKEQALSI---------- 109 (679)
T ss_pred HhcCeEEEEC-cCHHHHHHHHHHHHhCCCeEEEEcCCEecccccccCcCcChhhCCCHHHHHHHHHHHHh----------
Confidence 4567899999 79999999999999994 667766532 2233333333332
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+.-+++.+...++ .+.+.+.+.++|+||++.-.. .+..-..+.+.|.+.++ .+|+.+.
T Consensus 110 -nP~~~I~~~~~~i~-~~n~~~~l~~~DvVid~~D~~-------------~~~~r~~l~~~c~~~~i-P~i~~g~ 168 (679)
T PRK14851 110 -NPFLEITPFPAGIN-ADNMDAFLDGVDVVLDGLDFF-------------QFEIRRTLFNMAREKGI-PVITAGP 168 (679)
T ss_pred -CCCCeEEEEecCCC-hHHHHHHHhCCCEEEECCCCC-------------cHHHHHHHHHHHHHCCC-CEEEeec
Confidence 22346777777775 456788899999999875210 12223356677888876 5766554
|
|
| >PRK07411 hypothetical protein; Validated | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.035 Score=57.07 Aligned_cols=107 Identities=20% Similarity=0.178 Sum_probs=70.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..++..|+..| -++++++.+. .|...+.+.++++
T Consensus 36 L~~~~VlivG-~GGlG~~va~~La~~Gvg~l~lvD~D~ve~sNL~RQ~l~~~~dvG~~Ka~~a~~~l~~~---------- 104 (390)
T PRK07411 36 LKAASVLCIG-TGGLGSPLLLYLAAAGIGRIGIVDFDVVDSSNLQRQVIHGTSWVGKPKIESAKNRILEI---------- 104 (390)
T ss_pred HhcCcEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCEecccccCcCcccChHHCCCcHHHHHHHHHHHH----------
Confidence 4456899999 6999999999999999 4677777542 2233334444333
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+++.+...++. +...+.+.++|+||.|.. |...-..+-++|.+.++ .+|+.+..
T Consensus 105 -np~v~v~~~~~~~~~-~~~~~~~~~~D~Vvd~~d---------------~~~~r~~ln~~~~~~~~-p~v~~~~~ 162 (390)
T PRK07411 105 -NPYCQVDLYETRLSS-ENALDILAPYDVVVDGTD---------------NFPTRYLVNDACVLLNK-PNVYGSIF 162 (390)
T ss_pred -CCCCeEEEEecccCH-HhHHHHHhCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEc
Confidence 122356666666654 456678899999999953 23333345577777775 67776554
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0072 Score=60.62 Aligned_cols=98 Identities=23% Similarity=0.314 Sum_probs=62.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC---hh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---RV 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---~~ 155 (446)
.+.+|||+||+|+||...++.+...|+.+++.+.+.++.+.+ +++ | --+. .|..+ .+
T Consensus 142 ~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-~~l------------G-----Ad~v--i~y~~~~~~~ 201 (326)
T COG0604 142 PGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-KEL------------G-----ADHV--INYREEDFVE 201 (326)
T ss_pred CCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-Hhc------------C-----CCEE--EcCCcccHHH
Confidence 368999999999999999999999997777777776665532 211 1 1111 12222 23
Q ss_pred cHHHHhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.++.. ++|+|++..|... ....++.++. + ++++.+...+
T Consensus 202 ~v~~~t~g~gvDvv~D~vG~~~----------------~~~~l~~l~~-~-G~lv~ig~~~ 244 (326)
T COG0604 202 QVRELTGGKGVDVVLDTVGGDT----------------FAASLAALAP-G-GRLVSIGALS 244 (326)
T ss_pred HHHHHcCCCCceEEEECCCHHH----------------HHHHHHHhcc-C-CEEEEEecCC
Confidence 3444443 5999999987521 2223444433 3 5888888765
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.0095 Score=48.11 Aligned_cols=67 Identities=28% Similarity=0.302 Sum_probs=49.2
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC---CeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG---FRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G---~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+|.|.| +|.+|.+|++.|++.| ++|++. .|++++..++.+++ .+.+.. .+.
T Consensus 1 kI~iIG-~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~------------------~~~~~~------~~~ 55 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEY------------------GVQATA------DDN 55 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHC------------------TTEEES------EEH
T ss_pred CEEEEC-CCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhh------------------cccccc------CCh
Confidence 477786 8999999999999999 999965 99999888765431 122221 246
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
.++++.+|+||.+.-.
T Consensus 56 ~~~~~~advvilav~p 71 (96)
T PF03807_consen 56 EEAAQEADVVILAVKP 71 (96)
T ss_dssp HHHHHHTSEEEE-S-G
T ss_pred HHhhccCCEEEEEECH
Confidence 6777889999999643
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >PRK14852 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.58 E-value=0.035 Score=62.51 Aligned_cols=110 Identities=15% Similarity=0.181 Sum_probs=72.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|+||..++..|+..|. ++++++.+. .|...+.+.++++
T Consensus 330 L~~srVlVvG-lGGlGs~ia~~LAraGVG~I~L~D~D~Ve~SNLNRQ~l~~~~dIG~~Kaevaa~~l~~I---------- 398 (989)
T PRK14852 330 LLRSRVAIAG-LGGVGGIHLMTLARTGIGNFNLADFDAYSPVNLNRQYGASIASFGRGKLDVMTERALSV---------- 398 (989)
T ss_pred HhcCcEEEEC-CcHHHHHHHHHHHHcCCCeEEEEcCCEecccccccccCCChhhCCChHHHHHHHHHHHH----------
Confidence 4567899999 79999999999999994 667666532 2333344444433
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.-+|+.+...+ +.+.+.+.++++|+||.+.-.. ....-..+.+.|.+.++ .||+.++.+
T Consensus 399 -NP~v~I~~~~~~I-~~en~~~fl~~~DiVVDa~D~~-------------~~~~rr~l~~~c~~~~I-P~I~ag~~G 459 (989)
T PRK14852 399 -NPFLDIRSFPEGV-AAETIDAFLKDVDLLVDGIDFF-------------ALDIRRRLFNRALELGI-PVITAGPLG 459 (989)
T ss_pred -CCCCeEEEEecCC-CHHHHHHHhhCCCEEEECCCCc-------------cHHHHHHHHHHHHHcCC-CEEEeeccc
Confidence 2223566665566 4566888899999999875221 12223456677888886 777777643
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.0086 Score=62.52 Aligned_cols=67 Identities=22% Similarity=0.240 Sum_probs=49.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|.||+|.+|..+++.|.+.|++|++.+|+++....+... -++.+ .....++
T Consensus 1 MkI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~~------------------~gv~~-------~~~~~e~ 55 (437)
T PRK08655 1 MKISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAKE------------------LGVEY-------ANDNIDA 55 (437)
T ss_pred CEEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHHH------------------cCCee-------ccCHHHH
Confidence 4799999999999999999999999999999987664433221 11211 1234566
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||-+..
T Consensus 56 ~~~aDvVIlavp 67 (437)
T PRK08655 56 AKDADIVIISVP 67 (437)
T ss_pred hccCCEEEEecC
Confidence 778899888864
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.054 Score=56.59 Aligned_cols=115 Identities=11% Similarity=0.029 Sum_probs=69.1
Q ss_pred EECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhcCC
Q 013273 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALGNA 164 (446)
Q Consensus 85 VtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~~~ 164 (446)
|+||+|.+|.++++.|...|++|++..+...+... ....++.-+.+|.+..+..++
T Consensus 43 l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~-------------------~~~~~~~~~~~d~~~~~~~~~----- 98 (450)
T PRK08261 43 LVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAA-------------------GWGDRFGALVFDATGITDPAD----- 98 (450)
T ss_pred EEccCchhHHHHHHHHhhCCCeeeecCcccccccc-------------------CcCCcccEEEEECCCCCCHHH-----
Confidence 77888999999999999999999987665432110 001233333344443332222
Q ss_pred CEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHH
Q 013273 165 SVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL 242 (446)
Q Consensus 165 D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l 242 (446)
+.+...+++++.+. ..+|||+++|...... ...|..+|+..+.++
T Consensus 99 ------------------------l~~~~~~~~~~l~~l~~~griv~i~s~~~~~~---------~~~~~~akaal~gl~ 145 (450)
T PRK08261 99 ------------------------LKALYEFFHPVLRSLAPCGRVVVLGRPPEAAA---------DPAAAAAQRALEGFT 145 (450)
T ss_pred ------------------------HHHHHHHHHHHHHhccCCCEEEEEccccccCC---------chHHHHHHHHHHHHH
Confidence 12222333333221 2359999998654211 124888898888776
Q ss_pred H------hCCCCEEEEecCC
Q 013273 243 I------ASGLPYTIVRPGG 256 (446)
Q Consensus 243 ~------~~gl~~tivRPg~ 256 (446)
+ ..|+.++.|.++.
T Consensus 146 rsla~E~~~gi~v~~i~~~~ 165 (450)
T PRK08261 146 RSLGKELRRGATAQLVYVAP 165 (450)
T ss_pred HHHHHHhhcCCEEEEEecCC
Confidence 5 2578888888765
|
|
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.03 Score=55.20 Aligned_cols=99 Identities=18% Similarity=0.218 Sum_probs=64.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+++|+|++|.+|..+++.+...|++|++++++..+...+.. . + ... ..|..+.+...
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~~----~---------~------~~~-~~~~~~~~~~~ 225 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE----L---------G------ADY-VIDYRKEDFVR 225 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------C------CCe-EEecCChHHHH
Confidence 45789999999999999999999999999999998766544311 1 1 111 12444433323
Q ss_pred H---Hh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 159 P---AL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 159 ~---a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
. .. .++|.+|+++|.. ....+++.++.. ++||.+++...
T Consensus 226 ~~~~~~~~~~~d~~i~~~g~~----------------~~~~~~~~l~~~--G~~v~~~~~~~ 269 (342)
T cd08266 226 EVRELTGKRGVDVVVEHVGAA----------------TWEKSLKSLARG--GRLVTCGATTG 269 (342)
T ss_pred HHHHHhCCCCCcEEEECCcHH----------------HHHHHHHHhhcC--CEEEEEecCCC
Confidence 2 22 3689999998741 122334444433 58999987543
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.012 Score=59.54 Aligned_cols=77 Identities=21% Similarity=0.301 Sum_probs=52.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++.|||.||+|++|.+.++.+...|+.+++.+++.++.+... .+ | .+. ..|..|.+-+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k----~l---------G------Ad~-vvdy~~~~~~ 215 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK----KL---------G------ADE-VVDYKDENVV 215 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH----Hc---------C------CcE-eecCCCHHHH
Confidence 45679999999999999999999999966666666666554332 11 1 111 2466664444
Q ss_pred HHHh----cCCCEEEEcccCC
Q 013273 158 EPAL----GNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~----~~~D~VI~~Ag~~ 174 (446)
+... +++|+|++|+|..
T Consensus 216 e~~kk~~~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 216 ELIKKYTGKGVDVVLDCVGGS 236 (347)
T ss_pred HHHHhhcCCCccEEEECCCCC
Confidence 4333 3699999999863
|
|
| >PLN02353 probable UDP-glucose 6-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.022 Score=59.93 Aligned_cols=82 Identities=18% Similarity=0.108 Sum_probs=54.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEE----Ec-CCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV----EC-DLE 152 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v----~~-Dl~ 152 (446)
+|+|.|.| .|++|..++-.|++.| ++|++++.++++.+.+++... . ...++++-+ .+ .+.
T Consensus 1 ~m~I~ViG-~GyvGl~~A~~lA~~g~g~~V~gvD~~~~~v~~l~~g~~----~--------~~e~gl~ell~~~~~~~l~ 67 (473)
T PLN02353 1 MVKICCIG-AGYVGGPTMAVIALKCPDIEVVVVDISVPRIDAWNSDQL----P--------IYEPGLDEVVKQCRGKNLF 67 (473)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhcCCCCeEEEEECCHHHHHHHHcCCC----c--------cCCCCHHHHHHHhhcCCEE
Confidence 46899998 7999999999999985 889999999998777653210 0 000111000 00 111
Q ss_pred ChhcHHHHhcCCCEEEEcccCC
Q 013273 153 KRVQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~ 174 (446)
-..++.+++.++|++|-|.+..
T Consensus 68 ~t~~~~~~i~~advi~I~V~TP 89 (473)
T PLN02353 68 FSTDVEKHVAEADIVFVSVNTP 89 (473)
T ss_pred EEcCHHHHHhcCCEEEEEeCCC
Confidence 1233566788999999998854
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.013 Score=62.25 Aligned_cols=76 Identities=22% Similarity=0.305 Sum_probs=56.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.|+ |.+|+.+++.|...|. +|+++.|+.++...+.+.+ +++.+.. ...++
T Consensus 264 l~~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~-----------------~g~~i~~---~~~~d 322 (519)
T PLN00203 264 HASARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEF-----------------PDVEIIY---KPLDE 322 (519)
T ss_pred CCCCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHh-----------------CCCceEe---ecHhh
Confidence 45689999996 9999999999999996 7999999998887765432 1121111 22345
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+++.++|+||.+.+..
T Consensus 323 l~~al~~aDVVIsAT~s~ 340 (519)
T PLN00203 323 MLACAAEADVVFTSTSSE 340 (519)
T ss_pred HHHHHhcCCEEEEccCCC
Confidence 677789999999987653
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.012 Score=53.27 Aligned_cols=38 Identities=18% Similarity=0.131 Sum_probs=33.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
...+++|+|.|+.+.+|..+++.|.++|.+|+++.|+.
T Consensus 41 ~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~ 78 (168)
T cd01080 41 DLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKT 78 (168)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCc
Confidence 36788999999866789999999999999999999864
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.025 Score=60.02 Aligned_cols=82 Identities=15% Similarity=0.054 Sum_probs=53.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhh--hcccccccCCCCCCceEEE-EcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK--LDGELANKGIQPVEMLELV-ECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~--l~~~~~~~g~~~~~~v~~v-~~Dl~d~~~~ 157 (446)
++|.|.| +|.+|..++..|++.|++|++.++++++.+.+.+.++... +... ...... .+.+.-..++
T Consensus 5 ~kIavIG-~G~MG~~iA~~la~~G~~V~v~D~~~~~~~~~~~~~~~~~~~~~~l---------~~~~~~~~g~i~~~~~~ 74 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFLLAGIDVAVFDPHPEAERIIGEVLANAERAYAML---------TDAPLPPEGRLTFCASL 74 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHhhh---------ccchhhhhhceEeeCCH
Confidence 5799998 7999999999999999999999999888766543222110 0000 000000 0111112456
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
.++++++|+||-+..
T Consensus 75 ~ea~~~aD~Vieavp 89 (495)
T PRK07531 75 AEAVAGADWIQESVP 89 (495)
T ss_pred HHHhcCCCEEEEcCc
Confidence 778899999998864
|
|
| >PRK06153 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.049 Score=55.35 Aligned_cols=103 Identities=15% Similarity=0.138 Sum_probs=67.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc----------------------hhHHHHHHHHHHhhhccccc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV----------------------QRAENLVQSVKQMKLDGELA 134 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~----------------------~~~~~l~~~~~~~~l~~~~~ 134 (446)
....+|+|.| .|++|++++..|++.| -++++++.+. .|.+.+.+.+.++
T Consensus 174 L~~~~VaIVG-~GG~GS~Va~~LAR~GVgeI~LVD~D~Ve~SNLnRQ~gaf~~~DvGk~~~KVevaa~rl~~i------- 245 (393)
T PRK06153 174 LEGQRIAIIG-LGGTGSYILDLVAKTPVREIHLFDGDDFLQHNAFRSPGAASIEELREAPKKVDYFKSRYSNM------- 245 (393)
T ss_pred HhhCcEEEEc-CCccHHHHHHHHHHcCCCEEEEECCCEecccccccccccCCHhHcCCcchHHHHHHHHHHHh-------
Confidence 4567999999 7999999999999999 4777777542 1222222222222
Q ss_pred ccCCCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 135 NKGIQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 135 ~~g~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
..++..+...+ +.+.+. .+.++|+||.|.. |..+-..+.++|.+.++ .+|.++-
T Consensus 246 ------n~~I~~~~~~I-~~~n~~-~L~~~DiV~dcvD---------------n~~aR~~ln~~a~~~gI-P~Id~G~ 299 (393)
T PRK06153 246 ------RRGIVPHPEYI-DEDNVD-ELDGFTFVFVCVD---------------KGSSRKLIVDYLEALGI-PFIDVGM 299 (393)
T ss_pred ------CCeEEEEeecC-CHHHHH-HhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEeee
Confidence 13466665555 445444 5789999999964 23444456677777776 5777553
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.091 Score=49.08 Aligned_cols=71 Identities=23% Similarity=0.275 Sum_probs=52.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|||.| .|.+|..-++.|++.|++|++++.+... ...+. . ..++.++..++..
T Consensus 7 l~gk~vlVvG-gG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~----~--------------~~~i~~~~~~~~~--- 64 (205)
T TIGR01470 7 LEGRAVLVVG-GGDVALRKARLLLKAGAQLRVIAEELESELTLLA----E--------------QGGITWLARCFDA--- 64 (205)
T ss_pred cCCCeEEEEC-cCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH----H--------------cCCEEEEeCCCCH---
Confidence 4567999999 5999999999999999999999876542 12211 1 1578898888763
Q ss_pred HHHHhcCCCEEEEccc
Q 013273 157 IEPALGNASVVICCIG 172 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag 172 (446)
..+.+++.||-+.+
T Consensus 65 --~dl~~~~lVi~at~ 78 (205)
T TIGR01470 65 --DILEGAFLVIAATD 78 (205)
T ss_pred --HHhCCcEEEEECCC
Confidence 23578898886643
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.038 Score=55.20 Aligned_cols=40 Identities=30% Similarity=0.259 Sum_probs=35.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
.+|||.||+|.+|..+++.+...|+ +|+++++++++...+
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~ 196 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLL 196 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 7999999999999999998888998 799999988766554
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.35 E-value=0.045 Score=54.94 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=34.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
.+.+|+|+|+ |.||...++.+...|. +|+++++++++.+.+
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a 210 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA 210 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH
Confidence 4578999985 9999999998888997 688899988776543
|
|
| >PRK08040 putative semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.32 E-value=0.017 Score=58.08 Aligned_cols=96 Identities=23% Similarity=0.178 Sum_probs=58.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.++++|.|.||||++|+.|++.|.++. .++..+....+.-..+. +. + ..+.+- |+.
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~hP~~~l~~laS~~saG~~~~-------~~------~----~~~~v~--~~~-- 60 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQFPVGELYALASEESAGETLR-------FG------G----KSVTVQ--DAA-- 60 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCCCCceEEEEEEccCcCCceEE-------EC------C----cceEEE--eCc--
Confidence 356789999999999999999999953 56766655432111100 00 0 111111 221
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+..+.++|+||.+++.. ....++..+.+.|+ ++|=.|+..
T Consensus 61 ---~~~~~~~Dvvf~a~p~~----------------~s~~~~~~~~~~g~-~VIDlS~~f 100 (336)
T PRK08040 61 ---EFDWSQAQLAFFVAGRE----------------ASAAYAEEATNAGC-LVIDSSGLF 100 (336)
T ss_pred ---hhhccCCCEEEECCCHH----------------HHHHHHHHHHHCCC-EEEECChHh
Confidence 12246799999987642 24556666666676 677777643
|
|
| >PRK13302 putative L-aspartate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.041 Score=53.70 Aligned_cols=71 Identities=20% Similarity=0.298 Sum_probs=47.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC--CCeEE-EEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL--GFRVR-AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~--G~~V~-~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+.+++|.|.| .|.||+.+++.|.+. +++|. +.+|++++.+.+.+.+ +... -.
T Consensus 4 m~~irIGIIG-~G~IG~~~a~~L~~~~~~~el~aV~dr~~~~a~~~a~~~-----------------g~~~-------~~ 58 (271)
T PRK13302 4 RPELRVAIAG-LGAIGKAIAQALDRGLPGLTLSAVAVRDPQRHADFIWGL-----------------RRPP-------PV 58 (271)
T ss_pred CCeeEEEEEC-ccHHHHHHHHHHHhcCCCeEEEEEECCCHHHHHHHHHhc-----------------CCCc-------cc
Confidence 4457899999 799999999999874 78886 4566666655433211 0000 11
Q ss_pred hcHHHHhcCCCEEEEcccC
Q 013273 155 VQIEPALGNASVVICCIGA 173 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~ 173 (446)
.++++++..+|+||-|++.
T Consensus 59 ~~~eell~~~D~Vvi~tp~ 77 (271)
T PRK13302 59 VPLDQLATHADIVVEAAPA 77 (271)
T ss_pred CCHHHHhcCCCEEEECCCc
Confidence 3455666789999999764
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.015 Score=57.14 Aligned_cols=37 Identities=19% Similarity=0.143 Sum_probs=33.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
...+++|+|.|++|.+|+.++..|+++|..|+++.|.
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~ 192 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSR 192 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCC
Confidence 3577899999999999999999999999999988873
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=96.25 E-value=0.058 Score=44.47 Aligned_cols=88 Identities=20% Similarity=0.317 Sum_probs=60.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++|||+|| |.+|.+=++.|++.|.+|++++... ... + +.+.+..-++
T Consensus 5 l~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~----~----------------~~i~~~~~~~------ 54 (103)
T PF13241_consen 5 LKGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFS----E----------------GLIQLIRREF------ 54 (103)
T ss_dssp -TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHH----H----------------TSCEEEESS-------
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhh----h----------------hHHHHHhhhH------
Confidence 46789999996 9999999999999999999999886 110 0 3466655443
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
++.+.+++.||-+.+. -.....+.+.|++.++ +|++..
T Consensus 55 ~~~l~~~~lV~~at~d---------------~~~n~~i~~~a~~~~i--~vn~~D 92 (103)
T PF13241_consen 55 EEDLDGADLVFAATDD---------------PELNEAIYADARARGI--LVNVVD 92 (103)
T ss_dssp GGGCTTESEEEE-SS----------------HHHHHHHHHHHHHTTS--EEEETT
T ss_pred HHHHhhheEEEecCCC---------------HHHHHHHHHHHhhCCE--EEEECC
Confidence 3447888988855322 2234567778877765 777765
|
|
| >PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.016 Score=61.27 Aligned_cols=44 Identities=20% Similarity=0.238 Sum_probs=37.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
..+++++|+|+ |++|++++..|++.|++|++.+|+.++.+.+.+
T Consensus 330 ~~~k~vlIiGa-GgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~ 373 (477)
T PRK09310 330 LNNQHVAIVGA-GGAAKAIATTLARAGAELLIFNRTKAHAEALAS 373 (477)
T ss_pred cCCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 45679999995 999999999999999999999999877766543
|
|
| >PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.026 Score=55.58 Aligned_cols=44 Identities=20% Similarity=0.178 Sum_probs=37.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
..++|.|.| .|.+|..++..|+++|++|++.+|+++..+...+.
T Consensus 3 ~~~kI~vIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~ 46 (292)
T PRK07530 3 AIKKVGVIG-AGQMGNGIAHVCALAGYDVLLNDVSADRLEAGLAT 46 (292)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHH
Confidence 346899999 59999999999999999999999998877665443
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.034 Score=49.67 Aligned_cols=69 Identities=29% Similarity=0.374 Sum_probs=46.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++++|+| =|.+|+.+++.|...|.+|++...++-++-+.. + .+.+.. .
T Consensus 20 ~l~Gk~vvV~G-YG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-------~------------dGf~v~--------~ 71 (162)
T PF00670_consen 20 MLAGKRVVVIG-YGKVGKGIARALRGLGARVTVTEIDPIRALQAA-------M------------DGFEVM--------T 71 (162)
T ss_dssp --TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-------H------------TT-EEE---------
T ss_pred eeCCCEEEEeC-CCcccHHHHHHHhhCCCEEEEEECChHHHHHhh-------h------------cCcEec--------C
Confidence 56788999999 799999999999999999999999885543321 1 223332 3
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+++++..+|++|.+.|.
T Consensus 72 ~~~a~~~adi~vtaTG~ 88 (162)
T PF00670_consen 72 LEEALRDADIFVTATGN 88 (162)
T ss_dssp HHHHTTT-SEEEE-SSS
T ss_pred HHHHHhhCCEEEECCCC
Confidence 77888999999998775
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.075 Score=53.20 Aligned_cols=97 Identities=20% Similarity=0.199 Sum_probs=66.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |++|...++.+...|++|++++|++++.+...+. +.-.++..- |.+.+
T Consensus 165 ~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~~l------------------GAd~~i~~~--~~~~~ 223 (339)
T COG1064 165 KPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAKKL------------------GADHVINSS--DSDAL 223 (339)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHHHh------------------CCcEEEEcC--Cchhh
Confidence 34679999996 5999999999999999999999999987654331 222333322 55555
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
+++-+.+|+||++++ .. + ....++.++.. +++|.++-.
T Consensus 224 ~~~~~~~d~ii~tv~-~~-~--------------~~~~l~~l~~~--G~~v~vG~~ 261 (339)
T COG1064 224 EAVKEIADAIIDTVG-PA-T--------------LEPSLKALRRG--GTLVLVGLP 261 (339)
T ss_pred HHhHhhCcEEEECCC-hh-h--------------HHHHHHHHhcC--CEEEEECCC
Confidence 555555999999987 22 1 23344555544 378887754
|
|
| >PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.016 Score=57.83 Aligned_cols=69 Identities=22% Similarity=0.306 Sum_probs=53.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|++|++.+|..... ..+..+ ....++
T Consensus 134 l~g~tvgIvG-~G~IG~~vA~~l~afG~~V~~~~~~~~~~------------------------~~~~~~----~~~~~l 184 (312)
T PRK15469 134 REDFTIGILG-AGVLGSKVAQSLQTWGFPLRCWSRSRKSW------------------------PGVQSF----AGREEL 184 (312)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCCCCC------------------------CCceee----cccccH
Confidence 5678999999 89999999999999999999999865321 111111 124578
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++.++|+|+.+...+.
T Consensus 185 ~e~l~~aDvvv~~lPlt~ 202 (312)
T PRK15469 185 SAFLSQTRVLINLLPNTP 202 (312)
T ss_pred HHHHhcCCEEEECCCCCH
Confidence 999999999999976543
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.031 Score=57.34 Aligned_cols=39 Identities=13% Similarity=0.102 Sum_probs=35.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR 116 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~ 116 (446)
..+|+|||||+...+|..+++.|.+.|++|++++.++..
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~ 40 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFHNAGHTVILADSLKYP 40 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH
Confidence 356899999999999999999999999999999988644
|
|
| >KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.019 Score=55.16 Aligned_cols=113 Identities=22% Similarity=0.149 Sum_probs=71.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeE---EEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRV---RAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V---~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.+-+|.|.||.|+||+-|...| +....| .+.+-.. ..... .+ .+. +-........-.
T Consensus 27 ~~~KVAvlGAaGGIGQPLSLLl-K~np~Vs~LaLYDi~~~~GVaa---Dl-----------SHI----~T~s~V~g~~g~ 87 (345)
T KOG1494|consen 27 RGLKVAVLGAAGGIGQPLSLLL-KLNPLVSELALYDIANTPGVAA---DL-----------SHI----NTNSSVVGFTGA 87 (345)
T ss_pred CcceEEEEecCCccCccHHHHH-hcCcccceeeeeecccCCcccc---cc-----------ccc----CCCCceeccCCh
Confidence 4468999999999999996555 454333 2222211 10000 00 010 011111223335
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
+.+++++.++|+||--||...+..-..+..|.+|..-...|..++.++..+.+|.+
T Consensus 88 ~~L~~al~~advVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~cP~A~i~v 143 (345)
T KOG1494|consen 88 DGLENALKGADVVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKCCPNALILV 143 (345)
T ss_pred hHHHHHhcCCCEEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhhCccceeEe
Confidence 68999999999999999987665555566789999999999999988755544443
|
|
| >PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.083 Score=51.98 Aligned_cols=42 Identities=19% Similarity=0.246 Sum_probs=36.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
++|.|.| +|.+|..++..|++.|++|++++++++..+...+.
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la~~G~~V~l~d~~~~~l~~~~~~ 45 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFARTGYDVTIVDVSEEILKNAMEL 45 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 5799999 59999999999999999999999999877654443
|
|
| >PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.018 Score=57.70 Aligned_cols=43 Identities=23% Similarity=0.157 Sum_probs=37.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
.+|+|.|.| .|-+|..++..|++.|++|++.+|++++.+.+.+
T Consensus 3 ~~m~I~iIG-~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~ 45 (328)
T PRK14618 3 HGMRVAVLG-AGAWGTALAVLAASKGVPVRLWARRPEFAAALAA 45 (328)
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 356899998 6999999999999999999999998877666543
|
|
| >TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms) | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.025 Score=57.13 Aligned_cols=34 Identities=38% Similarity=0.356 Sum_probs=28.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV 114 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~ 114 (446)
++|.|+|++|++|++|++.|..++ ++|..+.++.
T Consensus 1 ~kVaIvGatG~~G~~L~~~l~~~~~~~l~~v~~~~ 35 (341)
T TIGR00978 1 MRVAVLGATGLVGQKFVKLLAKHPYFELAKVVASP 35 (341)
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCceEEEEEECh
Confidence 479999999999999999998876 6888775443
|
Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.077 Score=53.50 Aligned_cols=34 Identities=32% Similarity=0.329 Sum_probs=30.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
.+.+|+|+|+ |.||...+..+...|.+|++++|+
T Consensus 172 ~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~ 205 (355)
T cd08230 172 NPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRR 205 (355)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 4578999985 999999999888899999999984
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.073 Score=50.53 Aligned_cols=41 Identities=32% Similarity=0.298 Sum_probs=35.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN 119 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~ 119 (446)
..+.+|+|+|+++ +|..+++.+...|.+|+++++++++.+.
T Consensus 133 ~~~~~vli~g~~~-~G~~~~~~a~~~g~~v~~~~~~~~~~~~ 173 (271)
T cd05188 133 KPGDTVLVLGAGG-VGLLAAQLAKAAGARVIVTDRSDEKLEL 173 (271)
T ss_pred CCCCEEEEECCCH-HHHHHHHHHHHcCCeEEEEcCCHHHHHH
Confidence 3457899999988 9999999999999999999998765544
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >PRK00094 gpsA NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.09 E-value=0.02 Score=56.93 Aligned_cols=80 Identities=18% Similarity=0.217 Sum_probs=51.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
||+|.|.| .|.+|..++..|++.|++|++++|+++..+.+.+..... ........ ...+.-..+..+
T Consensus 1 mmkI~iiG-~G~mG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~-~~~~~~~~~~~~ 67 (325)
T PRK00094 1 MMKIAVLG-AGSWGTALAIVLARNGHDVTLWARDPEQAAEINADRENP-----------RYLPGIKL-PDNLRATTDLAE 67 (325)
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHcCccc-----------ccCCCCcC-CCCeEEeCCHHH
Confidence 36899999 599999999999999999999999987766554321000 00001000 001111234556
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
++.++|+||-+..
T Consensus 68 ~~~~~D~vi~~v~ 80 (325)
T PRK00094 68 ALADADLILVAVP 80 (325)
T ss_pred HHhCCCEEEEeCC
Confidence 7788999998864
|
|
| >COG1023 Gnd Predicted 6-phosphogluconate dehydrogenase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.052 Score=51.21 Aligned_cols=118 Identities=17% Similarity=0.148 Sum_probs=76.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE---cCCCCh--h
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE---CDLEKR--V 155 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~---~Dl~d~--~ 155 (446)
|.+-+.| -|..|.+++++|++.||+|++.++++...+.+...-. ...............+++.++- +|++|. +
T Consensus 1 M~iGmiG-LGrMG~n~v~rl~~~ghdvV~yD~n~~av~~~~~~ga-~~a~sl~el~~~L~~pr~vWlMvPag~it~~vi~ 78 (300)
T COG1023 1 MQIGMIG-LGRMGANLVRRLLDGGHDVVGYDVNQTAVEELKDEGA-TGAASLDELVAKLSAPRIVWLMVPAGDITDAVID 78 (300)
T ss_pred Ccceeec-cchhhHHHHHHHHhCCCeEEEEcCCHHHHHHHHhcCC-ccccCHHHHHHhcCCCcEEEEEccCCCchHHHHH
Confidence 3466777 7999999999999999999999999877666543210 0000000000112345666553 566653 4
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
++...+..=|+||.--. .|+.-+.+-.+.+++.|+ +|+=+.+.+.
T Consensus 79 ~la~~L~~GDivIDGGN--------------S~y~Ds~rr~~~l~~kgi-~flD~GTSGG 123 (300)
T COG1023 79 DLAPLLSAGDIVIDGGN--------------SNYKDSLRRAKLLAEKGI-HFLDVGTSGG 123 (300)
T ss_pred HHHhhcCCCCEEEECCc--------------cchHHHHHHHHHHHhcCC-eEEeccCCCC
Confidence 45555666689987532 256667777777888888 8999888654
|
|
| >TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.33 Score=47.71 Aligned_cols=91 Identities=19% Similarity=0.244 Sum_probs=63.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++.+|+|-|-||.+|+.+.+.|+..|++++..+ ++.+.. ..+ ..+.-..++.
T Consensus 5 ~~~~~~~~g~~~~~~~~~~~~~~~~g~~~v~~V-~p~~~~-----------------------~~v----~G~~~y~sv~ 56 (286)
T TIGR01019 5 KDTKVIVQGITGSQGSFHTEQMLAYGTNIVGGV-TPGKGG-----------------------TTV----LGLPVFDSVK 56 (286)
T ss_pred CCCcEEEecCCcHHHHHHHHHHHhCCCCEEEEE-CCCCCc-----------------------cee----cCeeccCCHH
Confidence 345899999999999999999999998855544 432110 111 1222234566
Q ss_pred HHhcC--CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 159 PALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
++-+. +|.+|-+... ..+..+++.|.+.|++.+|.+|+.
T Consensus 57 dlp~~~~~Dlavi~vpa----------------~~v~~~l~e~~~~Gvk~avIis~G 97 (286)
T TIGR01019 57 EAVEETGANASVIFVPA----------------PFAADAIFEAIDAGIELIVCITEG 97 (286)
T ss_pred HHhhccCCCEEEEecCH----------------HHHHHHHHHHHHCCCCEEEEECCC
Confidence 66554 7999888653 235667888888999999888875
|
ATP citrate lyases appear to form an outgroup. |
| >PF01210 NAD_Gly3P_dh_N: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; InterPro: IPR011128 NAD-dependent glycerol-3-phosphate dehydrogenase (GPDH) catalyses the interconversion of dihydroxyacetone phosphate and L-glycerol-3-phosphate | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.01 Score=52.88 Aligned_cols=79 Identities=20% Similarity=0.286 Sum_probs=51.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
+|.|.| +|-.|.+++..|.++|++|++..|+++..+.+.+..... ...+++.+-. .+.=..++++++
T Consensus 1 KI~ViG-aG~~G~AlA~~la~~g~~V~l~~~~~~~~~~i~~~~~n~-----------~~~~~~~l~~-~i~~t~dl~~a~ 67 (157)
T PF01210_consen 1 KIAVIG-AGNWGTALAALLADNGHEVTLWGRDEEQIEEINETRQNP-----------KYLPGIKLPE-NIKATTDLEEAL 67 (157)
T ss_dssp EEEEES-SSHHHHHHHHHHHHCTEEEEEETSCHHHHHHHHHHTSET-----------TTSTTSBEET-TEEEESSHHHHH
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHHhCCCC-----------CCCCCcccCc-ccccccCHHHHh
Confidence 589999 599999999999999999999999997777665432211 0011111111 111124578889
Q ss_pred cCCCEEEEcccC
Q 013273 162 GNASVVICCIGA 173 (446)
Q Consensus 162 ~~~D~VI~~Ag~ 173 (446)
+++|+||-+...
T Consensus 68 ~~ad~IiiavPs 79 (157)
T PF01210_consen 68 EDADIIIIAVPS 79 (157)
T ss_dssp TT-SEEEE-S-G
T ss_pred CcccEEEecccH
Confidence 999999977543
|
This family represents the N-terminal NAD-binding domain [].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0046168 glycerol-3-phosphate catabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 1YJ8_B 2PLA_A 1WPQ_B 1X0V_A 1X0X_A 1BG6_A 1TXG_B 1N1G_A 1M67_A 1JDJ_A .... |
| >PRK11559 garR tartronate semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.025 Score=55.65 Aligned_cols=65 Identities=17% Similarity=0.212 Sum_probs=49.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|.|.| .|.+|..+++.|++.|++|++.+|++.+.+.+.+ .++.+ ..++.++
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~~~g~~v~~~d~~~~~~~~~~~-------------------~g~~~-------~~~~~e~ 55 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVYDRNPEAVAEVIA-------------------AGAET-------ASTAKAV 55 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence 5799999 7999999999999999999999999877655422 11211 1345667
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+..+|+||-+..
T Consensus 56 ~~~~d~vi~~vp 67 (296)
T PRK11559 56 AEQCDVIITMLP 67 (296)
T ss_pred HhcCCEEEEeCC
Confidence 788999998864
|
|
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.03 Score=54.63 Aligned_cols=42 Identities=31% Similarity=0.332 Sum_probs=36.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+++|+|+|++|.+|..+++.+...|.+|++++++.++...+
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~ 185 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV 185 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467999999999999999999999999999999987665543
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.031 Score=57.83 Aligned_cols=67 Identities=22% Similarity=0.246 Sum_probs=50.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+| .|.||+.++..|...|.+|+++++++.+...... .++++ . .+
T Consensus 210 l~Gk~VlViG-~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~~-------------------~G~~v-----~---~l 261 (425)
T PRK05476 210 IAGKVVVVAG-YGDVGKGCAQRLRGLGARVIVTEVDPICALQAAM-------------------DGFRV-----M---TM 261 (425)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEcCCchhhHHHHh-------------------cCCEe-----c---CH
Confidence 4678999999 5999999999999999999999998866432211 11221 1 24
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
++++.++|+||.+.|
T Consensus 262 ~eal~~aDVVI~aTG 276 (425)
T PRK05476 262 EEAAELGDIFVTATG 276 (425)
T ss_pred HHHHhCCCEEEECCC
Confidence 567789999998865
|
|
| >COG2084 MmsB 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases [Lipid metabolism] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.081 Score=51.81 Aligned_cols=67 Identities=27% Similarity=0.314 Sum_probs=50.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|.+.| .|-.|..++..|+++||+|++.+|++++..++... .| ... .++..++
T Consensus 1 ~kIafIG-LG~MG~pmA~~L~~aG~~v~v~~r~~~ka~~~~~~------------~G------a~~-------a~s~~ea 54 (286)
T COG2084 1 MKIAFIG-LGIMGSPMAANLLKAGHEVTVYNRTPEKAAELLAA------------AG------ATV-------AASPAEA 54 (286)
T ss_pred CeEEEEc-CchhhHHHHHHHHHCCCEEEEEeCChhhhhHHHHH------------cC------Ccc-------cCCHHHH
Confidence 3688888 89999999999999999999999999884433221 12 111 2445778
Q ss_pred hcCCCEEEEcccC
Q 013273 161 LGNASVVICCIGA 173 (446)
Q Consensus 161 ~~~~D~VI~~Ag~ 173 (446)
...+|+||-|...
T Consensus 55 a~~aDvVitmv~~ 67 (286)
T COG2084 55 AAEADVVITMLPD 67 (286)
T ss_pred HHhCCEEEEecCC
Confidence 8899999998753
|
|
| >TIGR01505 tartro_sem_red 2-hydroxy-3-oxopropionate reductase | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.02 Score=56.28 Aligned_cols=63 Identities=19% Similarity=0.248 Sum_probs=47.9
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHhc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPALG 162 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~~ 162 (446)
|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .| . ....+..++++
T Consensus 2 IgvIG-~G~mG~~iA~~l~~~G~~V~~~dr~~~~~~~~~~-------------~g------~-------~~~~~~~~~~~ 54 (291)
T TIGR01505 2 VGFIG-LGIMGSPMSINLAKAGYQLHVTTIGPEVADELLA-------------AG------A-------VTAETARQVTE 54 (291)
T ss_pred EEEEE-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------CC------C-------cccCCHHHHHh
Confidence 77888 7999999999999999999999999877665432 01 1 11234567778
Q ss_pred CCCEEEEccc
Q 013273 163 NASVVICCIG 172 (446)
Q Consensus 163 ~~D~VI~~Ag 172 (446)
++|+||-+..
T Consensus 55 ~aDivi~~vp 64 (291)
T TIGR01505 55 QADVIFTMVP 64 (291)
T ss_pred cCCEEEEecC
Confidence 8899988865
|
This model represents 2-hydroxy-3-oxopropionate reductase (EC 1.1.1.60), also called tartronate semialdehyde reductase. It follows glyoxylate carboligase and precedes glycerate kinase in D-glycerate pathway of glyoxylate degradation. The eventual product, 3-phosphoglycerate, is an intermediate of glycolysis and is readily metabolized. Tartronic semialdehyde, the substrate of this enzyme, may also come from other pathways, such as D-glucarate catabolism. |
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.048 Score=55.87 Aligned_cols=71 Identities=17% Similarity=0.154 Sum_probs=52.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|.|.| .|.||+.+++.|..-|.+|++.+|........ + . .++ .-..+
T Consensus 189 ~L~gktVGIvG-~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~--------------~----~g~-------~~~~~ 241 (385)
T PRK07574 189 DLEGMTVGIVG-AGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-Q--------------E----LGL-------TYHVS 241 (385)
T ss_pred ecCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-h--------------h----cCc-------eecCC
Confidence 35778999999 79999999999999999999999876322110 0 0 111 11345
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+++++..+|+|+.+....
T Consensus 242 l~ell~~aDvV~l~lPlt 259 (385)
T PRK07574 242 FDSLVSVCDVVTIHCPLH 259 (385)
T ss_pred HHHHhhcCCEEEEcCCCC
Confidence 888999999999987653
|
|
| >PRK15461 NADH-dependent gamma-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.03 Score=55.29 Aligned_cols=40 Identities=28% Similarity=0.333 Sum_probs=35.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 2 ~~Ig~IG-lG~mG~~mA~~l~~~G~~V~v~d~~~~~~~~~~ 41 (296)
T PRK15461 2 AAIAFIG-LGQMGSPMASNLLKQGHQLQVFDVNPQAVDALV 41 (296)
T ss_pred CeEEEEe-eCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH
Confidence 4789998 899999999999999999999999988776543
|
|
| >PLN02545 3-hydroxybutyryl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=95.91 E-value=0.099 Score=51.51 Aligned_cols=44 Identities=18% Similarity=0.105 Sum_probs=37.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
..++|.|.| .|.+|..++..|+..|++|++.+++++..+...+.
T Consensus 3 ~~~~V~vIG-~G~mG~~iA~~l~~~G~~V~~~d~~~~~~~~~~~~ 46 (295)
T PLN02545 3 EIKKVGVVG-AGQMGSGIAQLAAAAGMDVWLLDSDPAALSRGLDS 46 (295)
T ss_pred CcCEEEEEC-CCHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHH
Confidence 346899999 59999999999999999999999998876654433
|
|
| >PRK06728 aspartate-semialdehyde dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.89 E-value=0.041 Score=55.43 Aligned_cols=94 Identities=18% Similarity=0.183 Sum_probs=55.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCe---EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK-LGFR---VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~-~G~~---V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.++|.|.||||++|+.+++.|.+ ..++ ++++....+.-..+ . +....+.+...| .+
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~h~~f~v~~l~~~aS~~saGk~~-------~----------~~~~~l~v~~~~---~~ 64 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEKETKFNIAEVTLLSSKRSAGKTV-------Q----------FKGREIIIQEAK---IN 64 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHHCCCCCcccEEEEECcccCCCCe-------e----------eCCcceEEEeCC---HH
Confidence 46899999999999999999996 5666 66665443211110 0 000123333222 22
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.++|+||.+++.. ....++..+.+.|+ .+|=.|+..
T Consensus 65 ----~~~~~Divf~a~~~~----------------~s~~~~~~~~~~G~-~VID~Ss~f 102 (347)
T PRK06728 65 ----SFEGVDIAFFSAGGE----------------VSRQFVNQAVSSGA-IVIDNTSEY 102 (347)
T ss_pred ----HhcCCCEEEECCChH----------------HHHHHHHHHHHCCC-EEEECchhh
Confidence 246799999987642 14455556666665 666666643
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.021 Score=51.53 Aligned_cols=41 Identities=24% Similarity=0.282 Sum_probs=33.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
...+|+|+| +|.+|...++.|...|++|++++....+...+
T Consensus 19 ~p~~vvv~G-~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~ 59 (168)
T PF01262_consen 19 PPAKVVVTG-AGRVGQGAAEIAKGLGAEVVVPDERPERLRQL 59 (168)
T ss_dssp -T-EEEEES-TSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH
T ss_pred CCeEEEEEC-CCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh
Confidence 346899999 79999999999999999999999988766543
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK09599 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.24 Score=49.04 Aligned_cols=39 Identities=28% Similarity=0.336 Sum_probs=35.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+
T Consensus 1 m~Ig~IG-lG~MG~~mA~~L~~~g~~v~v~dr~~~~~~~~ 39 (301)
T PRK09599 1 MQLGMIG-LGRMGGNMARRLLRGGHEVVGYDRNPEAVEAL 39 (301)
T ss_pred CEEEEEc-ccHHHHHHHHHHHHCCCeEEEEECCHHHHHHH
Confidence 4788998 89999999999999999999999998877664
|
|
| >PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.042 Score=54.63 Aligned_cols=34 Identities=15% Similarity=0.224 Sum_probs=27.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS 113 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~ 113 (446)
+.+|.|.||||++|..|++.|.++. .++..+..+
T Consensus 2 ~~~VaIvGAtGy~G~eLlrlL~~hp~~~l~~~~s~ 36 (313)
T PRK11863 2 KPKVFIDGEAGTTGLQIRERLAGRSDIELLSIPEA 36 (313)
T ss_pred CcEEEEECCCCHHHHHHHHHHhcCCCeEEEEEecC
Confidence 4689999999999999999999886 455555543
|
|
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.027 Score=56.61 Aligned_cols=69 Identities=16% Similarity=0.177 Sum_probs=52.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|.|.| .|.||+.+++.|...|++|++.+|+...... . . .++. ..+
T Consensus 147 ~L~gktvgIiG-~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~--~---~---------------~~~~--------~~~ 197 (333)
T PRK13243 147 DVYGKTIGIIG-FGRIGQAVARRAKGFGMRILYYSRTRKPEAE--K---E---------------LGAE--------YRP 197 (333)
T ss_pred CCCCCEEEEEC-cCHHHHHHHHHHHHCCCEEEEECCCCChhhH--H---H---------------cCCE--------ecC
Confidence 46789999999 6999999999999999999999987643211 0 0 0111 235
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+++++..+|+|+.+....
T Consensus 198 l~ell~~aDiV~l~lP~t 215 (333)
T PRK13243 198 LEELLRESDFVSLHVPLT 215 (333)
T ss_pred HHHHHhhCCEEEEeCCCC
Confidence 778899999999998654
|
|
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.042 Score=54.31 Aligned_cols=42 Identities=26% Similarity=0.216 Sum_probs=36.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+|||.||+|.+|..+++.+...|.+|+++++++++.+.+
T Consensus 143 ~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l 184 (329)
T cd08294 143 AGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL 184 (329)
T ss_pred CCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 457999999999999999999999999999999988776554
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.82 E-value=0.12 Score=52.42 Aligned_cols=75 Identities=19% Similarity=0.264 Sum_probs=50.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+|+|.| +|.||..+++.+...|.+|++++.+.++...+.++ + | ++.+ .|..+.+.+.
T Consensus 183 ~g~~VlV~G-~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~---~---------G------a~~v-i~~~~~~~~~ 242 (360)
T PLN02586 183 PGKHLGVAG-LGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINR---L---------G------ADSF-LVSTDPEKMK 242 (360)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHh---C---------C------CcEE-EcCCCHHHHH
Confidence 457899977 59999999999999999998888776554332221 1 1 2211 1233334455
Q ss_pred HHhcCCCEEEEcccC
Q 013273 159 PALGNASVVICCIGA 173 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~ 173 (446)
+...++|+||.+.|.
T Consensus 243 ~~~~~~D~vid~~g~ 257 (360)
T PLN02586 243 AAIGTMDYIIDTVSA 257 (360)
T ss_pred hhcCCCCEEEECCCC
Confidence 555679999999874
|
|
| >PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.022 Score=58.18 Aligned_cols=36 Identities=22% Similarity=0.314 Sum_probs=32.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
..++|.|.||.|.+|..+++.|.+.|++|++.+|+.
T Consensus 97 ~~~~I~IiGG~GlmG~slA~~l~~~G~~V~~~d~~~ 132 (374)
T PRK11199 97 DLRPVVIVGGKGQLGRLFAKMLTLSGYQVRILEQDD 132 (374)
T ss_pred ccceEEEEcCCChhhHHHHHHHHHCCCeEEEeCCCc
Confidence 457899999999999999999999999999999853
|
|
| >PRK12490 6-phosphogluconate dehydrogenase-like protein; Reviewed | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.16 Score=50.13 Aligned_cols=39 Identities=18% Similarity=0.117 Sum_probs=34.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+
T Consensus 1 m~Ig~IG-lG~mG~~mA~~L~~~g~~v~v~dr~~~~~~~~ 39 (299)
T PRK12490 1 MKLGLIG-LGKMGGNMAERLREDGHEVVGYDVNQEAVDVA 39 (299)
T ss_pred CEEEEEc-ccHHHHHHHHHHHhCCCEEEEEECCHHHHHHH
Confidence 3688998 89999999999999999999999998776654
|
|
| >PRK15057 UDP-glucose 6-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.79 E-value=0.065 Score=55.06 Aligned_cols=40 Identities=23% Similarity=0.059 Sum_probs=34.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
|+|.|.| .|++|..++..|+ .||+|+++++++++.+.+.+
T Consensus 1 mkI~VIG-lGyvGl~~A~~lA-~G~~VigvD~d~~kv~~l~~ 40 (388)
T PRK15057 1 MKITISG-TGYVGLSNGLLIA-QNHEVVALDILPSRVAMLND 40 (388)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-hCCcEEEEECCHHHHHHHHc
Confidence 4688998 8999999997666 59999999999998877654
|
|
| >PTZ00142 6-phosphogluconate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.25 Score=52.10 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=37.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
.+|.|.| .|-.|..+++.|+++|++|++.+|+.++.+.+.+
T Consensus 2 ~~IgvIG-LG~MG~~lA~nL~~~G~~V~v~dr~~~~~~~l~~ 42 (470)
T PTZ00142 2 SDIGLIG-LAVMGQNLALNIASRGFKISVYNRTYEKTEEFVK 42 (470)
T ss_pred CEEEEEe-EhHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH
Confidence 4699999 7999999999999999999999999998887654
|
|
| >PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.079 Score=51.00 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=67.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||+|||+ =|+.|++.|.++|+ |++.+-..-. ..+.. .....+.+..+-+.|.+.+.+.
T Consensus 1 m~ILvlgGTt-E~r~la~~L~~~g~-v~~sv~t~~g-~~~~~----------------~~~~~~~v~~G~lg~~~~l~~~ 61 (249)
T PF02571_consen 1 MKILVLGGTT-EGRKLAERLAEAGY-VIVSVATSYG-GELLK----------------PELPGLEVRVGRLGDEEGLAEF 61 (249)
T ss_pred CEEEEEechH-HHHHHHHHHHhcCC-EEEEEEhhhh-Hhhhc----------------cccCCceEEECCCCCHHHHHHH
Confidence 6899999997 59999999999998 6554432211 11100 0114678888999889999999
Q ss_pred h--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEE
Q 013273 161 L--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF 207 (446)
Q Consensus 161 ~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~ 207 (446)
+ .+++.||+..-.. . ...+.|+.++|++.|+..+
T Consensus 62 l~~~~i~~vIDATHPf-----------A--~~is~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 62 LRENGIDAVIDATHPF-----------A--AEISQNAIEACRELGIPYL 97 (249)
T ss_pred HHhCCCcEEEECCCch-----------H--HHHHHHHHHHHhhcCcceE
Confidence 8 5799999985432 1 3457889999998887533
|
Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process |
| >PRK06522 2-dehydropantoate 2-reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.042 Score=54.04 Aligned_cols=39 Identities=23% Similarity=0.227 Sum_probs=34.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
|+|+|.|+ |.+|..++..|.+.|++|++++|+.+..+.+
T Consensus 1 m~I~IiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~ 39 (304)
T PRK06522 1 MKIAILGA-GAIGGLFGAALAQAGHDVTLVARRGAHLDAL 39 (304)
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECChHHHHHH
Confidence 47999995 9999999999999999999999987665544
|
|
| >COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.032 Score=55.51 Aligned_cols=98 Identities=17% Similarity=0.103 Sum_probs=59.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceE-E--EEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLE-L--VECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~-~--v~~Dl~d~~ 155 (446)
+++|.|.||+|+.|..|++.|+.+. .++.+.+.+..+-..+.+.+ +++. + +.....|.+
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~Hp~ve~~~~ss~~~~g~~~~~~~-----------------p~l~g~~~l~~~~~~~~ 64 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAGHPDVELILISSRERAGKPVSDVH-----------------PNLRGLVDLPFQTIDPE 64 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhcCCCeEEEEeechhhcCCchHHhC-----------------cccccccccccccCChh
Confidence 5789999999999999999999985 67766665443222222211 2222 1 111111222
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+ ..+++|+||.+.... ....++......++ ++|=+|..
T Consensus 65 ~~--~~~~~DvvFlalPhg----------------~s~~~v~~l~~~g~-~VIDLSad 103 (349)
T COG0002 65 KI--ELDECDVVFLALPHG----------------VSAELVPELLEAGC-KVIDLSAD 103 (349)
T ss_pred hh--hcccCCEEEEecCch----------------hHHHHHHHHHhCCC-eEEECCcc
Confidence 22 356799999986431 14456666666676 58878874
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.053 Score=55.97 Aligned_cols=68 Identities=25% Similarity=0.279 Sum_probs=50.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|.| .|.||+.++..|...|.+|+++++++.+...... .++..+ + +
T Consensus 200 l~GktVvViG-~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~-------------------~G~~~~-----~---~ 251 (413)
T cd00401 200 IAGKVAVVAG-YGDVGKGCAQSLRGQGARVIVTEVDPICALQAAM-------------------EGYEVM-----T---M 251 (413)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHh-------------------cCCEEc-----c---H
Confidence 4678999999 6999999999999999999999998876544321 122222 1 2
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
++++.++|+||.+.|.
T Consensus 252 ~e~v~~aDVVI~atG~ 267 (413)
T cd00401 252 EEAVKEGDIFVTTTGN 267 (413)
T ss_pred HHHHcCCCEEEECCCC
Confidence 4567889999998764
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK12480 D-lactate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.044 Score=55.07 Aligned_cols=67 Identities=16% Similarity=0.262 Sum_probs=51.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|.|.| .|.||+.+++.|...|++|++.+|+...... .+. -..+
T Consensus 143 ~l~g~~VgIIG-~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~-----------------------~~~-------~~~~ 191 (330)
T PRK12480 143 PVKNMTVAIIG-TGRIGAATAKIYAGFGATITAYDAYPNKDLD-----------------------FLT-------YKDS 191 (330)
T ss_pred ccCCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEeCChhHhhh-----------------------hhh-------ccCC
Confidence 35678999999 7999999999999999999999998643110 011 1235
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+++++.++|+|+.+....
T Consensus 192 l~ell~~aDiVil~lP~t 209 (330)
T PRK12480 192 VKEAIKDADIISLHVPAN 209 (330)
T ss_pred HHHHHhcCCEEEEeCCCc
Confidence 788899999999887643
|
|
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.14 Score=51.07 Aligned_cols=74 Identities=27% Similarity=0.309 Sum_probs=50.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RV 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~ 155 (446)
.+.+|+|+|+ |.||..+++.+...|.+ |+++++++++.+.+.+ + | +..+ .|..+ .+
T Consensus 163 ~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~----~---------g------a~~~-i~~~~~~~~ 221 (339)
T cd08239 163 GRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAKA----L---------G------ADFV-INSGQDDVQ 221 (339)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h---------C------CCEE-EcCCcchHH
Confidence 4679999985 99999999999999988 9998888776554321 1 1 1111 22222 23
Q ss_pred cHHHHhc--CCCEEEEcccC
Q 013273 156 QIEPALG--NASVVICCIGA 173 (446)
Q Consensus 156 ~~~~a~~--~~D~VI~~Ag~ 173 (446)
.+.++.. ++|+||++.|.
T Consensus 222 ~~~~~~~~~~~d~vid~~g~ 241 (339)
T cd08239 222 EIRELTSGAGADVAIECSGN 241 (339)
T ss_pred HHHHHhCCCCCCEEEECCCC
Confidence 3444443 68999999874
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >TIGR02992 ectoine_eutC ectoine utilization protein EutC | Back alignment and domain information |
|---|
Probab=95.75 E-value=0.062 Score=53.88 Aligned_cols=75 Identities=15% Similarity=0.217 Sum_probs=56.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~-~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++++|.| +|+.|+..++.|+. .+ .+|++..|+.++.+.+.+++... -++++.. .++
T Consensus 128 ~~~~v~iiG-aG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~--------------~g~~v~~-----~~~ 187 (326)
T TIGR02992 128 DSSVVAIFG-AGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSL--------------LGIDVTA-----ATD 187 (326)
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhh--------------cCceEEE-----eCC
Confidence 456899999 79999999999974 66 57999999999998887766431 1233322 245
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+++++.++|+||++.+.
T Consensus 188 ~~~av~~aDiVvtaT~s 204 (326)
T TIGR02992 188 PRAAMSGADIIVTTTPS 204 (326)
T ss_pred HHHHhccCCEEEEecCC
Confidence 77888999999999754
|
Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423). |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 446 | ||||
| 1xq6_A | 253 | X-ray Structure Of Gene Product From Arabidopsis Th | 6e-12 |
| >pdb|1XQ6|A Chain A, X-ray Structure Of Gene Product From Arabidopsis Thaliana At5g02240 Length = 253 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} Length = 236 | Back alignment and structure |
|---|
Score = 184 bits (469), Expect = 5e-56
Identities = 57/246 (23%), Positives = 97/246 (39%), Gaps = 34/246 (13%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GA GKV + EL G A VR+ ++ L +
Sbjct: 25 LVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL------------------RERGA 66
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
++V +LE+ A + V+ G+ ID + A
Sbjct: 67 SDIVVANLEE--DFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRG 122
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
+ FIMVSS+GT P L+ KR A++ L S L YTIVRPG + ++
Sbjct: 123 IKRFIMVSSVGTVD---PDQGPMNMRHYLVAKRLADDELKRSSLDYTIVRPGPL---SNE 176
Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
+ T +T+S + ++ VA+++A + + + K EV+ TP+ ++
Sbjct: 177 -ESTGKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD----TPIAKV 230
Query: 324 LAKIPS 329
+ ++ S
Sbjct: 231 VEQLGS 236
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* Length = 253 | Back alignment and structure |
|---|
Score = 178 bits (454), Expect = 1e-53
Identities = 63/270 (23%), Positives = 103/270 (38%), Gaps = 48/270 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
V GA+G+ G ++L + F + VRS Q E +
Sbjct: 8 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEA----------------- 50
Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGAS---------------EKEVFDITGPYR 186
++ D+ I PA ++ A E D P +
Sbjct: 51 ---DVFIGDITDADSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQ 107
Query: 187 IDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASG 246
+D+ KN +DAA +A V H ++V S+G P L +L+WKRKAE+ L SG
Sbjct: 108 VDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHPLNKLGN-GNILVWKRKAEQYLADSG 166
Query: 247 LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG---GQVSNLQVAELLACMAKNRSLSY 303
PYTI+R GG+ +E + + ++D L V VAE+ +
Sbjct: 167 TPYTIIRAGGLLDKEGGVRE---LLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AK 222
Query: 304 CKVVEVI---AETTAPLTPMEELLAKIPSQ 330
K ++ T+ P + L +++ S+
Sbjct: 223 NKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} Length = 219 | Back alignment and structure |
|---|
Score = 164 bits (418), Expect = 1e-48
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 38/245 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
F+ G+TG+VG ++ L +++ AG R V++
Sbjct: 4 FIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------------------NN 42
Query: 144 LELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
++ V D++ + + L +I G+ K ++D L+ AA A
Sbjct: 43 VKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGK------SLLKVDLYGAVKLMQAAEKA 96
Query: 203 KVNHFIMVSSLGT-NKFGFPAAILNLFWGVLLWKRKAEEALI-ASGLPYTIVRPGGMERP 260
+V FI++S++ + + A + + K A+ L + L YTI++PG +
Sbjct: 97 EVKRFILLSTIFSLQPEKWIGAGFDALKDYYIAKHFADLYLTKETNLDYTIIQPGAL--- 153
Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPM 320
T+ + T I ++ E + VA+ + + S KV+ + TA +
Sbjct: 154 TEE-EATGLIDINDE---VSASNTIGDVADTIKELVMTDH-SIGKVISMHNGKTAIKEAL 208
Query: 321 EELLA 325
E LL
Sbjct: 209 ESLLE 213
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* Length = 206 | Back alignment and structure |
|---|
Score = 163 bits (414), Expect = 3e-48
Identities = 35/211 (16%), Positives = 68/211 (32%), Gaps = 32/211 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG+ G T+ + ++ G+ V VR R +
Sbjct: 7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLP-------------SEGPRP------ 47
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+V D+ + ++ + VI +G P + + +N+V A
Sbjct: 48 AHVVVGDVLQAADVDKTVAGQDAVIVLLGTRND-----LSPTTVMSEGARNIVAAMKAHG 102
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
V+ + +S P + V + + L SGL Y V P ++P
Sbjct: 103 VDKVVACTSAFL--LWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQP-- 158
Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
T T++ + +S + +
Sbjct: 159 ---LTGAYTVTLDGRGPSRVISKHDLGHFML 186
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} Length = 236 | Back alignment and structure |
|---|
Score = 136 bits (344), Expect = 1e-37
Identities = 43/242 (17%), Positives = 78/242 (32%), Gaps = 41/242 (16%)
Query: 84 FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ GA G++ + +L K + R + +
Sbjct: 27 LILGAGGQIARHVINQLADKQTIKQTLFARQPAKIH-------------KPYPTNS---- 69
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
+++ D+ ++ A+ +V + +D QA +++ A
Sbjct: 70 --QIIMGDVLNHAALKQAMQGQDIVYANLTGE-----------DLDIQA-NSVIAAMKAC 115
Query: 203 KVNHFIMVSSLGTNK---FGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
V I V SLG F + L R+A +A+ ASGL YTI+RP +
Sbjct: 116 DVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLKPFRRAADAIEASGLEYTILRPAWLTD 175
Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
Y+ T + + G VS VA L+ + + + + T
Sbjct: 176 EDIIDYELTS-----RNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPGTDGDK 230
Query: 319 PM 320
P
Sbjct: 231 PF 232
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 3r14_A* Length = 221 | Back alignment and structure |
|---|
Score = 115 bits (289), Expect = 5e-30
Identities = 37/220 (16%), Positives = 66/220 (30%), Gaps = 38/220 (17%)
Query: 84 FVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ GA G++ LL + R ++ I E
Sbjct: 9 TILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPP----------------EIIDHE 52
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
+ ++E + +E A+ NA VV ++V A +
Sbjct: 53 RVTVIEGSFQNPGXLEQAVTNAEVVFVGAME--------------SGSDMASIVKALSRX 98
Query: 203 KVNHFIMVSSLGTN----KFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGME 258
+ I VS G + NL + +R+A L S L YTI+R +
Sbjct: 99 NIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQGERQARNVLRESNLNYTILRLTWL- 157
Query: 259 RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298
+ + T + + QVS V + + +
Sbjct: 158 --YNDPEXTDYELIPEGAQFNDAQVSREAVVKAIFDILHA 195
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} Length = 227 | Back alignment and structure |
|---|
Score = 97.1 bits (242), Expect = 2e-23
Identities = 32/185 (17%), Positives = 55/185 (29%), Gaps = 32/185 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GA+G VGS + E L GF V A VR ++ + E
Sbjct: 8 VLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------------ENEH 47
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
L++ + D+ ++ A VI Y + ++D A
Sbjct: 48 LKVKKADVSSLDEVCEVCKGADAVISAFNPGWNN----PDIYDETIKVYLTIIDGVKKAG 103
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK--------AEEALIASGLPYTIVRPG 255
VN F+MV G+ +++ + + + P
Sbjct: 104 VNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGVKALGEFYLNFLMKEKEIDWVFFSPA 163
Query: 256 GMERP 260
RP
Sbjct: 164 ADMRP 168
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A Length = 299 | Back alignment and structure |
|---|
Score = 98.6 bits (246), Expect = 3e-23
Identities = 40/177 (22%), Positives = 61/177 (34%), Gaps = 29/177 (16%)
Query: 84 FVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V G TG G R LL+ G F+VR R+ ++ EL +G
Sbjct: 9 VVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAK-----------ELRLQGA---- 53
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
E+V+ D + +V +E AL A + + + + K L D A
Sbjct: 54 --EVVQGDQDDQVIMELALNGAYATFIVT------NYWESCSQEQEVKQGKLLADLARRL 105
Query: 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-ME 258
+++ + K F G K + EE G+P T VR E
Sbjct: 106 GLHYVVYSGLENIKKLTAGRLAAAHFDG----KGEVEEYFRDIGVPMTSVRLPCYFE 158
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 Length = 308 | Back alignment and structure |
|---|
Score = 95.0 bits (236), Expect = 5e-22
Identities = 33/173 (19%), Positives = 56/173 (32%), Gaps = 25/173 (14%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG +G + L LG + R + ++ +L G
Sbjct: 8 LLIGATGYIGRHVAKASLDLGHPTFL----LVRESTASSNSEKAQLLESFKASGA----- 58
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+V ++ + A+ N VVI +G+ + ++ N++ A
Sbjct: 59 -NIVHGSIDDHASLVEAVKNVDVVISTVGS-------------LQIESQVNIIKAIKEVG 104
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
S G + A V K K A+ A G+PYT V
Sbjct: 105 TVKRFFPSEFGNDVDNVHAVEPAK--SVFEVKAKVRRAIEAEGIPYTYVSSNC 155
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 Length = 313 | Back alignment and structure |
|---|
Score = 92.7 bits (230), Expect = 3e-21
Identities = 36/171 (21%), Positives = 60/171 (35%), Gaps = 21/171 (12%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G TG +G R V + LG R +V ++ ++++ G
Sbjct: 9 IVGGTGYIGKRIVNASISLGHPTYVLFR-----PEVVSNIDKVQMLLYFKQLGA------ 57
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
+L+E L+ ++ AL VVI + G LV+A A
Sbjct: 58 KLIEASLDDHQRLVDALKQVDVVISALAG---------GVLSHHILEQLKLVEAIKEAGN 108
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
+ S G + A+ + KRK A+ A+ +PYT V
Sbjct: 109 IKRFLPSEFGMDPDIMEHALQP-GSITFIDKRKVRRAIEAASIPYTYVSSN 158
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* Length = 352 | Back alignment and structure |
|---|
Score = 92.2 bits (229), Expect = 9e-21
Identities = 43/186 (23%), Positives = 65/186 (34%), Gaps = 43/186 (23%)
Query: 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELA 134
++ V GATG+ G+ +R +G VRA V S++ AE L A
Sbjct: 2 AQQKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL------------QA 49
Query: 135 NKGIQPVEMLELVECDLEKRVQ-IEPALGNASVVICCIGASEKEVFDITGPYRID-FQAT 192
+ L + L V ++ A + F T D
Sbjct: 50 IPNV------TLFQGPLLNNVPLMDTLFEGAHL-----------AFINTTSQAGDEIAIG 92
Query: 193 KNLVDAA-TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--KRKAEEALIASGLPY 249
K+L DAA + H+I SS+ ++ + V +W K E + GLP
Sbjct: 93 KDLADAAKRAGTIQHYI-YSSMP------DHSLYGPWPAVPMWAPKFTVENYVRQLGLPS 145
Query: 250 TIVRPG 255
T V G
Sbjct: 146 TFVYAG 151
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D Length = 287 | Back alignment and structure |
|---|
Score = 90.8 bits (226), Expect = 1e-20
Identities = 39/176 (22%), Positives = 65/176 (36%), Gaps = 44/176 (25%)
Query: 85 VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GATG++G ++ LLK ++ A VR+V++A LA++G+
Sbjct: 5 VTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS-------------TLADQGV---- 47
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQAT---KNLVDAA 199
E+ D + ++ A S + I+GP+ + N+V AA
Sbjct: 48 --EVRHGDYNQPESLQKAFAGVSKL-----------LFISGPHYDNTLLIVQHANVVKAA 94
Query: 200 TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
A V H + P A E A+ + +PYT +R
Sbjct: 95 RDAGVKHIAYTGYAFAEESIIPLA---------HVHLATEYAIRTTNIPYTFLRNA 141
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} Length = 221 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 5e-20
Identities = 34/223 (15%), Positives = 66/223 (29%), Gaps = 44/223 (19%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG+ GSR + E G V A VR+ + + +
Sbjct: 4 GIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI------------------- 44
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+++ D+ L + +VV+ G S + +L+
Sbjct: 45 -NILQKDIFDLT--LSDLSDQNVVVDAYGIS-------PDEAEKHVTSLDHLISVLNGTV 94
Query: 204 VNHFIMVSSLGTNKFGFPAAIL--------NLFWGVLLWKRKAEEALIA--SGLPYTIVR 253
++V + + L ++ + K E L + + +T +
Sbjct: 95 SPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYIS 154
Query: 254 PGGM---ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
P M T Y+ + L D +S A +
Sbjct: 155 PSAMFEPGERTGDYQIGKDHLLFGSDG--NSFISMEDYAIAVL 195
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* Length = 286 | Back alignment and structure |
|---|
Score = 88.5 bits (220), Expect = 6e-20
Identities = 35/174 (20%), Positives = 61/174 (35%), Gaps = 42/174 (24%)
Query: 85 VAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ GATG++G + L+K ++ A VR+ +A+ LA +GI
Sbjct: 4 ITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ-------------ALAAQGI---- 46
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRID-FQATKNLVDAATI 201
+ + D + AL + I+ +N+++AA
Sbjct: 47 --TVRQADYGDEAALTSALQGVEKL-----------LLISSSEVGQRAPQHRNVINAAKA 93
Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
A V S L + A + E+ L SG+ YT++R G
Sbjct: 94 AGVKFIAYTSLLHADTSPLGLAD---------EHIETEKMLADSGIVYTLLRNG 138
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} Length = 289 | Back alignment and structure |
|---|
Score = 87.3 bits (217), Expect = 2e-19
Identities = 34/175 (19%), Positives = 55/175 (31%), Gaps = 42/175 (24%)
Query: 85 VAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG +G+ + + GVR+V++ + +
Sbjct: 5 LTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVP-------------DDWRGKV----- 46
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+ + D + + A V+ I + F RI +NLV AA +
Sbjct: 47 -SVRQLDYFNQESMVEAFKGMDTVVF-IPSIIHPSFK-----RI--PEVENLVYAAKQSG 97
Query: 204 VNHFIMVSSLG---TNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
V H I + N F + A L SG+ YT VR
Sbjct: 98 VAHIIFIGYYADQHNNPFHMSP-----------YFGYASRLLSTSGIDYTYVRMA 141
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A Length = 242 | Back alignment and structure |
|---|
Score = 86.0 bits (213), Expect = 3e-19
Identities = 34/176 (19%), Positives = 60/176 (34%), Gaps = 31/176 (17%)
Query: 83 AFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
F+ GA+G+ G ++E+L+ G +V R + +
Sbjct: 21 VFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EA 61
Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
+ + D EK A V CC+G + + R+D + A
Sbjct: 62 YKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTRGKAGAEGF-VRVDRDYVLKSAELAK 120
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPG 255
HF ++SS G +K N + + K + E + Y++ RPG
Sbjct: 121 AGGCKHFNLLSSKGADKSS------NFLYLQV--KGEVEAKVEELKFDRYSVFRPG 168
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} Length = 307 | Back alignment and structure |
|---|
Score = 87.3 bits (216), Expect = 3e-19
Identities = 34/172 (19%), Positives = 53/172 (30%), Gaps = 24/172 (13%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G TG +G V +K G A VR A N + +L + G+
Sbjct: 7 ILGPTGAIGRHIVWASIKAGNPTYALVRKTITAAN---PETKEELIDNYQSLGV------ 57
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
L+E D+ + A+ +VIC G + ++ A A
Sbjct: 58 ILLEGDINDHETLVKAIKQVDIVICAAGRL-------------LIEDQVKIIKAIKEAGN 104
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
S G + A V K + A G+PYT +
Sbjct: 105 VKKFFPSEFGLDVDRHDAVEPVRQ--VFEEKASIRRVIEAEGVPYTYLCCHA 154
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 83.5 bits (207), Expect = 6e-18
Identities = 33/188 (17%), Positives = 51/188 (27%), Gaps = 32/188 (17%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GATG +G R + G + R + + L ++
Sbjct: 16 YAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL---------------AYLE--- 57
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
E ++ +E AL VI G T A A
Sbjct: 58 -PECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQA 116
Query: 203 KVNHFIMVSS---LGTNKFGFPA---AILNLFWGVLLW----KRKAEEA---LIASGLPY 249
+V + V S + + G P + K +E +GLP
Sbjct: 117 RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPV 176
Query: 250 TIVRPGGM 257
I PG +
Sbjct: 177 VIGIPGMV 184
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} Length = 321 | Back alignment and structure |
|---|
Score = 82.7 bits (204), Expect = 1e-17
Identities = 33/171 (19%), Positives = 58/171 (33%), Gaps = 25/171 (14%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G TG +G VR L R + ++L E + G+
Sbjct: 9 IYGGTGYIGKFMVRASLSFSHPTFI----YARPLTPDSTPSSVQLREEFRSMGV------ 58
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
++E ++E+ ++ L +VI + + ++++A A
Sbjct: 59 TIIEGEMEEHEKMVSVLKQVDIVISALPFP-------------MISSQIHIINAIKAAGN 105
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG 255
+ S G + L F VL KR A+ A+ LPYT V
Sbjct: 106 IKRFLPSDFGCEEDRIKP--LPPFESVLEKKRIIRRAIEAAALPYTYVSAN 154
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 Length = 215 | Back alignment and structure |
|---|
Score = 79.7 bits (197), Expect = 2e-17
Identities = 37/186 (19%), Positives = 66/186 (35%), Gaps = 34/186 (18%)
Query: 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
+AGATG G + +L + V + R + +
Sbjct: 7 RVLLAGATGLTGEHLLDRILSEPTLAK--VIAPAR----------------------KAL 42
Query: 142 EMLELVECDLEKRVQIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT 200
++ + ++ P L G+ CC+G + KE +DF + A
Sbjct: 43 AEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRAL 102
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP-YTIVRPGGMER 259
H+++VS+LG + + V K + E+AL G P TI RP +
Sbjct: 103 EMGARHYLVVSALGADAKSS-----IFYNRV---KGELEQALQEQGWPQLTIARPSLLFG 154
Query: 260 PTDAYK 265
P + ++
Sbjct: 155 PREEFR 160
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* Length = 318 | Back alignment and structure |
|---|
Score = 81.1 bits (200), Expect = 3e-17
Identities = 34/172 (19%), Positives = 58/172 (33%), Gaps = 30/172 (17%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G TG +G+ V+ LKLG R S K LD E + G
Sbjct: 16 IFGGTGYIGNHMVKGSLKLGHPTYVFTRP--------NSSKTTLLD-EFQSLGA------ 60
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
+V+ +L++ ++ + VVI + +++A +A
Sbjct: 61 IIVKGELDEHEKLVELMKKVDVVISALAFP-------------QILDQFKILEAIKVAGN 107
Query: 205 NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG 256
+ S G L F ++ KR A+ + +PYT V
Sbjct: 108 IKRFLPSDFGVE--EDRINALPPFEALIERKRMIRRAIEEANIPYTYVSANC 157
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} Length = 224 | Back alignment and structure |
|---|
Score = 79.3 bits (195), Expect = 4e-17
Identities = 31/184 (16%), Positives = 55/184 (29%), Gaps = 36/184 (19%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG+ GS V E + G V A VR Q+A + + +
Sbjct: 4 AVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAA-------------DRLGATVATL-- 48
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E V E L + V+ + +G + +LV +
Sbjct: 49 ------VKEPLVLTEADLDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD 97
Query: 204 VNHFIMVSSL--------GTNKFGFPAAILNLFW--GVLLWKRKAEEALIASGLPYTIVR 253
++ S FP + + W G L + + + + + + +
Sbjct: 98 TLAVFILGSASLAMPGADHPMILDFPESAASQPWYDGALYQYYEYQFLQMNANVNWIGIS 157
Query: 254 PGGM 257
P
Sbjct: 158 PSEA 161
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* Length = 346 | Back alignment and structure |
|---|
Score = 79.7 bits (196), Expect = 1e-16
Identities = 34/188 (18%), Positives = 59/188 (31%), Gaps = 30/188 (15%)
Query: 71 TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLD 130
T + S + +AGATG +G L R R S + K+
Sbjct: 2 TVSPVPSPKGRVL-IAGATGFIGQFVATASLDAHRPTYILARPGPR------SPSKAKIF 54
Query: 131 GELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRID 188
L +KG +V + ++ +E L +V+ +G I
Sbjct: 55 KALEDKGA------IIVYGLINEQEAMEKILKEHEIDIVVSTVGGES-----------IL 97
Query: 189 FQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLP 248
Q LV A + S G + + + KR+ + + SG+P
Sbjct: 98 DQ--IALVKAMKAVGTIKRFLPSEFGHDVNRADP--VEPGLNMYREKRRVRQLVEESGIP 153
Query: 249 YTIVRPGG 256
+T +
Sbjct: 154 FTYICCNS 161
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} Length = 286 | Back alignment and structure |
|---|
Score = 65.5 bits (160), Expect = 4e-12
Identities = 34/189 (17%), Positives = 55/189 (29%), Gaps = 55/189 (29%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+AG G +G R L G V RS Q G+Q
Sbjct: 7 LIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPA-----------------GVQT--- 45
Query: 144 LELVECDLEKRVQIEPALGNAS-VVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
+ D+ + + + +++ C+ ASE + + +N + A A
Sbjct: 46 ---LIADVTRPDTLASIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGA 99
Query: 203 KVNHFIMVSSLG---------------TNKFGFPAAILNLFWGVLLWKRKAEEALIASGL 247
+ H VSS G F + +AE L +
Sbjct: 100 PLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSGKRM----------LEAEALL--AAY 147
Query: 248 PYTIVRPGG 256
TI+R G
Sbjct: 148 SSTILRFSG 156
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* Length = 364 | Back alignment and structure |
|---|
Score = 55.1 bits (132), Expect = 2e-08
Identities = 27/203 (13%), Positives = 57/203 (28%), Gaps = 47/203 (23%)
Query: 83 AFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKG 137
A + G TG +G+ L ++V R + A + +
Sbjct: 4 ALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAWHEDNPI------------- 50
Query: 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVD 197
V+CD+ + L + V + + + +N++D
Sbjct: 51 -------NYVQCDISDPDDSQAKLSPLTDVTHVFYVTWANRSTEQENCEANSKMFRNVLD 103
Query: 198 A--ATIAKVNHFIMVSSLGTNKFGFPA------------------AILNLFWGVLLWKRK 237
A + H + + F + +N ++ +
Sbjct: 104 AVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHDPPYTEDLPRLKYMNFYYDL--EDIM 161
Query: 238 AEEALIASGLPYTIVRPGGMERP 260
EE GL +++ RPG +
Sbjct: 162 LEEVEKKEGLTWSVHRPGNIFGF 184
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} Length = 322 | Back alignment and structure |
|---|
Score = 50.7 bits (122), Expect = 4e-07
Identities = 31/144 (21%), Positives = 47/144 (32%), Gaps = 32/144 (22%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G TG +GS ++ LL+ G+ V +R+ + V + L G E
Sbjct: 5 CVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFLT--NLPG--------ASEK 54
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
L DL A+ + AS E+ V + G
Sbjct: 55 LHFFNADLSNPDSFAAAIEGCVGIFHT--ASPIDFAVSEPEEIVTKRTVDG--------A 104
Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
++ A +K V FI SS
Sbjct: 105 LGILKACVNSKTVKRFIYTSSGSA 128
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.2 bits (119), Expect = 1e-06
Identities = 41/279 (14%), Positives = 94/279 (33%), Gaps = 64/279 (22%)
Query: 27 SFGSCQ----ILKFPSSKKFSHPRKLKLPDFKAQASGTINICSEAVGATPTKADSKDDNL 82
+ +C +L+ +K + ++ P++ +++ + NI + S L
Sbjct: 188 NLKNCNSPETVLE--MLQKLLY--QID-PNWTSRSDHSSNI--------KLRIHSIQAEL 234
Query: 83 A-FVAGATGK--------VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGEL 133
+ + V + L ++ R Q + + + + +
Sbjct: 235 RRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVT-DFLSAATTTHISLDH 293
Query: 134 ANKGIQPVEMLELVECDLEKRVQIEP--ALGNASVVICCIGASEKEVFDITGPYRIDFQA 191
+ + P E+ L+ L+ R Q P L + I S ++ G D
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRD-----GLATWDN-- 346
Query: 192 TKNLVDAATIAKVNHFIMVS--SLGTN-------KFG-F------PAAILNLFWGVLLWK 235
K++ K+ I S L + F P +L+L W ++
Sbjct: 347 WKHV----NCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVI-- 400
Query: 236 RKAEEALIASGL-PYTIVRPGGMERPTDAYKETHNITLS 273
K++ ++ + L Y++V ++P ++ +I L
Sbjct: 401 -KSDVMVVVNKLHKYSLVE----KQPKESTISIPSIYLE 434
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A Length = 338 | Back alignment and structure |
|---|
Score = 48.4 bits (116), Expect = 2e-06
Identities = 33/144 (22%), Positives = 52/144 (36%), Gaps = 34/144 (23%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G TG V S V+ LL+ G+ V VR + V + +++ G+
Sbjct: 13 CVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKK-VSHLLELQELGD----------- 60
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
L++ DL + E + V A+ E ++ I G
Sbjct: 61 LKIFRADLTDELSFEAPIAGCDFVFHV--ATPVHFASEDPENDMIKPAIQG--------V 110
Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
N++ A T AK V I+ SS
Sbjct: 111 VNVMKACTRAKSVKRVILTSSAAA 134
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A Length = 342 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 6e-06
Identities = 35/140 (25%), Positives = 50/140 (35%), Gaps = 27/140 (19%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GA G V S V +LL+ G++VR RS + NL K+ P
Sbjct: 15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANL---QKRWDAKY--------PGRF 63
Query: 144 LELVECDLEKRVQIEPALGNASVVI-----CCIGASEKEVFD--ITGPYRIDFQATKNLV 196
V D+ K+ + + A+ V EV I G T N +
Sbjct: 64 ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGG--------TLNAL 115
Query: 197 DAATIAK-VNHFIMVSSLGT 215
AA V F++ SS +
Sbjct: 116 RAAAATPSVKRFVLTSSTVS 135
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* Length = 337 | Back alignment and structure |
|---|
Score = 46.1 bits (110), Expect = 1e-05
Identities = 35/144 (24%), Positives = 52/144 (36%), Gaps = 33/144 (22%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GA+G +GS V LL+ G+ VRA VR + + + L +
Sbjct: 9 CVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHL---LDLPKAETH-------- 57
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS---------EKEVFD--ITGPYRIDFQAT 192
L L + DL + A+ + V A+ E EV I G
Sbjct: 58 LTLWKADLADEGSFDEAIKGCTGVFHV--ATPMDFESKDPENEVIKPTIEG--------M 107
Query: 193 KNLVDAATIAK-VNHFIMVSSLGT 215
++ + AK V + SS GT
Sbjct: 108 LGIMKSCAAAKTVRRLVFTSSAGT 131
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* Length = 267 | Back alignment and structure |
|---|
Score = 45.4 bits (108), Expect = 1e-05
Identities = 20/128 (15%), Positives = 34/128 (26%), Gaps = 24/128 (18%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
V GA G++G L + +R S + A
Sbjct: 8 VTGAAGQLGRVMRERLAPMAEILRLADLS----------------PLDPAGPNE------ 45
Query: 145 ELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204
E V+CDL + + ++ + + NL +AA
Sbjct: 46 ECVQCDLADANAVNAMVAGCDGIVHL--GGISVEKPFEQILQGNIIGLYNLYEAARAHGQ 103
Query: 205 NHFIMVSS 212
+ SS
Sbjct: 104 PRIVFASS 111
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} Length = 267 | Back alignment and structure |
|---|
Score = 44.6 bits (106), Expect = 3e-05
Identities = 29/130 (22%), Positives = 40/130 (30%), Gaps = 28/130 (21%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GA G VGS L L VR + AE
Sbjct: 7 VTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAAEAHE---------------------- 44
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGAS-EKEVFDITGPYRIDFQATKNLVDAATIA 202
E+V CDL + + + +I G S E+ D + + NL +AA
Sbjct: 45 -EIVACDLADAQAVHDLVKDCDGIIHLGGVSVERPWND---ILQANIIGAYNLYEAARNL 100
Query: 203 KVNHFIMVSS 212
+ SS
Sbjct: 101 GKPRIVFASS 110
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} Length = 333 | Back alignment and structure |
|---|
Score = 44.5 bits (106), Expect = 3e-05
Identities = 35/179 (19%), Positives = 59/179 (32%), Gaps = 29/179 (16%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G G++GS LL+ G +V G+ +N G + ++ L
Sbjct: 26 ITGICGQIGSHIAELLLERGDKVV-GI------DNFA--------TGRREH--LKDHPNL 68
Query: 145 ELVECDLEKRVQIEPALGNASV-VICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
VE + + +G+ + AS K+ D + N+V AA
Sbjct: 69 TFVEGSIADHALVNQLIGDLQPDAVVHTAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNN 128
Query: 204 VNHFIMVSS---LGTNKFGFP------AAILNLFWGVLLWKRKAEEALIASGLPYTIVR 253
V F+ + G P N + + K E+ L SGL + R
Sbjct: 129 VGRFVYFQTALCYGVKPIQQPVRLDHPRNPANSSYAIS--KSANEDYLEYSGLDFVTFR 185
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} Length = 286 | Back alignment and structure |
|---|
Score = 41.4 bits (97), Expect = 3e-04
Identities = 21/131 (16%), Positives = 35/131 (26%), Gaps = 34/131 (25%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
G G R L G+R+ R+ + E + G +P+
Sbjct: 9 LSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQME-------------AIRASGAEPLLW 54
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
E EP+L + ++ D P A AA A+
Sbjct: 55 ------PGE-----EPSLDGVTHLLISTAPDSGG--D---PVL----AALGDQIAARAAQ 94
Query: 204 VNHFIMVSSLG 214
+S+
Sbjct: 95 FRWVGYLSTTA 105
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 446 | |||
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 100.0 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 100.0 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 100.0 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 100.0 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 100.0 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 100.0 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.98 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.98 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.98 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.98 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.97 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.97 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.97 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.97 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.97 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.97 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.97 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.97 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.97 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.97 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.97 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.97 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.97 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.97 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.97 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.97 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.97 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.97 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.97 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.97 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.97 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.97 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.97 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.97 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.97 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.97 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.97 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.97 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.97 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.97 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.96 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.96 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.96 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.96 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.96 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.96 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.96 | |
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.96 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.96 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.96 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.96 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.96 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.96 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.96 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.96 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.96 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.96 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.96 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.96 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.96 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.96 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.96 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.96 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.96 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.96 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.95 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.95 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.95 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.95 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.95 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.95 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.95 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.95 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.95 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.95 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.95 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.95 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.95 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.95 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.95 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.95 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.94 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.94 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.94 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.94 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.94 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.94 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.94 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.94 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.94 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.94 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.94 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.94 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.94 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.94 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.93 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.93 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.93 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.93 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.93 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.93 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.93 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.93 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.93 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.93 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.93 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.93 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.93 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.93 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.93 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.93 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.93 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.93 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.93 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.93 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.93 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.93 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.93 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.93 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.93 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.93 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.93 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.93 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.92 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.92 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.92 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.92 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.92 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.92 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.92 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.92 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.92 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.92 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.92 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.92 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.92 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.92 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.92 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.92 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.92 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.92 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.92 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.92 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.92 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.92 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.92 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.92 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.92 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.92 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.92 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.92 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.92 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.92 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.92 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.92 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.92 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.92 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.92 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.92 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.92 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 99.92 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.92 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.92 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.92 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.92 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.92 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.92 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.92 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.92 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.92 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.92 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.92 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.92 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.92 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.92 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.92 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.92 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.92 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.91 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.91 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.91 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.91 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.91 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.91 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.91 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.91 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.91 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.91 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.91 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.91 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.91 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.91 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.91 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.91 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.91 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.91 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.91 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.91 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.91 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.91 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.91 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.91 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.91 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.91 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.91 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.91 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.91 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.91 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 99.91 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.91 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.91 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.91 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.91 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.91 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.91 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.91 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.91 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.91 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.9 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.9 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.9 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.9 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.9 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.9 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.9 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 99.9 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.9 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.9 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.9 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.9 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.9 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.9 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.9 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.9 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.9 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.9 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.9 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.9 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.9 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.9 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.9 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 99.9 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.9 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.9 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.9 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.9 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.9 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 99.9 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.9 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.9 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.9 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.9 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.89 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.89 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.89 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.89 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 99.89 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.89 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 99.89 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.89 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.89 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 99.89 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.89 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 99.89 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.89 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 99.89 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 99.89 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.89 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 99.89 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.88 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 99.88 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.88 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.88 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 99.88 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.88 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 99.88 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 99.88 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 99.87 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.87 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 99.87 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 99.87 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 99.87 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.87 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 99.87 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 99.85 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 99.85 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 99.85 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 99.84 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 99.84 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.82 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.8 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 99.78 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 99.78 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 99.77 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 99.76 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 99.74 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 99.74 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 99.74 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.71 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 99.71 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 99.7 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 99.7 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 99.7 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 99.68 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 99.66 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 99.65 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 99.65 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 99.59 | |
| 3mhp_C | 26 | TIC62_peptide, ferredoxin--NADP reductase, LEAF is | 99.46 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 99.37 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 99.37 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 99.33 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 99.05 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 99.04 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 99.02 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 99.0 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 98.92 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 98.92 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 98.9 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 98.85 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 98.82 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 98.81 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 98.79 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 98.69 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 98.6 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 98.57 | |
| 5mdh_A | 333 | Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH | 98.56 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 98.53 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 98.53 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 98.53 | |
| 1mld_A | 314 | Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D | 98.46 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 98.41 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 98.41 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 98.29 | |
| 3fi9_A | 343 | Malate dehydrogenase; structural genomics, oxidore | 98.21 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 98.2 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 98.2 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 98.1 | |
| 3pqe_A | 326 | L-LDH, L-lactate dehydrogenase; FBP, oxidoreductas | 98.09 | |
| 2aef_A | 234 | Calcium-gated potassium channel MTHK; rossmann fol | 98.05 | |
| 3vku_A | 326 | L-LDH, L-lactate dehydrogenase; rossmann fold, NAD | 98.04 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 97.94 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 97.93 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 97.93 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 97.9 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 97.9 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 97.89 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 97.89 | |
| 1ur5_A | 309 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.89 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 97.89 | |
| 3gvi_A | 324 | Malate dehydrogenase; NAD, oxidoreductase, tricarb | 97.85 | |
| 1pzg_A | 331 | LDH, lactate dehydrogenase; apicomplexa, APAD, tet | 97.81 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.81 | |
| 3tl2_A | 315 | Malate dehydrogenase; center for structural genomi | 97.8 | |
| 1nvt_A | 287 | Shikimate 5'-dehydrogenase; structural genomics, P | 97.8 | |
| 4aj2_A | 331 | L-lactate dehydrogenase A chain; oxidoreductase-in | 97.79 | |
| 1ez4_A | 318 | Lactate dehydrogenase; rossmann fold, oxidoreducta | 97.77 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 97.75 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 97.74 | |
| 3p7m_A | 321 | Malate dehydrogenase; putative dehydrogenase, enzy | 97.73 | |
| 1oju_A | 294 | MDH, malate dehydrogenase; hyperthermophilic, oxid | 97.73 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.72 | |
| 2o7s_A | 523 | DHQ-SDH PR, bifunctional 3-dehydroquinate dehydrat | 97.72 | |
| 3d0o_A | 317 | L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, gly | 97.71 | |
| 1t2d_A | 322 | LDH-P, L-lactate dehydrogenase; ternary complex, o | 97.69 | |
| 3nep_X | 314 | Malate dehydrogenase; halophIle, molecular adpatat | 97.69 | |
| 1ldn_A | 316 | L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NA | 97.69 | |
| 3ldh_A | 330 | Lactate dehydrogenase; oxidoreductase, CHOH donor, | 97.67 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 97.67 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 97.66 | |
| 2x0j_A | 294 | Malate dehydrogenase; oxidoreductase, hyperthermop | 97.65 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 97.65 | |
| 1lnq_A | 336 | MTHK channels, potassium channel related protein; | 97.65 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 97.64 | |
| 1p77_A | 272 | Shikimate 5-dehydrogenase; NADPH, oxidoreductase; | 97.61 | |
| 2v6b_A | 304 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ra | 97.61 | |
| 1y6j_A | 318 | L-lactate dehydrogenase; southeast collaboratory f | 97.58 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 97.57 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 97.56 | |
| 3h8v_A | 292 | Ubiquitin-like modifier-activating enzyme 5; rossm | 97.56 | |
| 3hhp_A | 312 | Malate dehydrogenase; MDH, citric acid cycle, TCA | 97.55 | |
| 2ewd_A | 317 | Lactate dehydrogenase,; protein-substrate_cofactor | 97.54 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 97.52 | |
| 1zud_1 | 251 | Adenylyltransferase THIF; thiamin, thiazole, prote | 97.5 | |
| 2hjr_A | 328 | Malate dehydrogenase; malaria, structural genomics | 97.5 | |
| 2zqz_A | 326 | L-LDH, L-lactate dehydrogenase; oxidoreductase, ro | 97.49 | |
| 1hyh_A | 309 | L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2 | 97.46 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 97.45 | |
| 4h7p_A | 345 | Malate dehydrogenase; ssgcid, structural G seattle | 97.44 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 97.43 | |
| 2nqt_A | 352 | N-acetyl-gamma-glutamyl-phosphate reductase; apopr | 97.42 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.42 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 97.41 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 97.4 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 97.37 | |
| 2vns_A | 215 | Metalloreductase steap3; metal-binding, transmembr | 97.37 | |
| 2ozp_A | 345 | N-acetyl-gamma-glutamyl-phosphate reductase; amino | 97.36 | |
| 4e12_A | 283 | Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1 | 97.36 | |
| 1xyg_A | 359 | Putative N-acetyl-gamma-glutamyl-phosphate reduct; | 97.35 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 97.35 | |
| 2xxj_A | 310 | L-LDH, L-lactate dehydrogenase; oxidoreductase, hy | 97.34 | |
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 97.34 | |
| 1guz_A | 310 | Malate dehydrogenase; oxidoreductase, tricarboxyli | 97.33 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 97.31 | |
| 3u62_A | 253 | Shikimate dehydrogenase; shikimate pathway, oxidor | 97.3 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 97.26 | |
| 2hjs_A | 340 | USG-1 protein homolog; aspartate-semialdehyde dehy | 97.26 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 97.25 | |
| 4e21_A | 358 | 6-phosphogluconate dehydrogenase (decarboxylating; | 97.23 | |
| 1a5z_A | 319 | L-lactate dehydrogenase; oxidoreductase, glycolysi | 97.23 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 97.23 | |
| 3h5n_A | 353 | MCCB protein; ubiquitin-activating enzyme, microci | 97.23 | |
| 3gxh_A | 157 | Putative phosphatase (DUF442); YP_001181608.1, str | 97.21 | |
| 1lld_A | 319 | L-lactate dehydrogenase; oxidoreductase(CHOH (D)-N | 97.2 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 97.2 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 97.2 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 97.19 | |
| 1mv8_A | 436 | GMD, GDP-mannose 6-dehydrogenase; rossman fold, do | 97.18 | |
| 4g65_A | 461 | TRK system potassium uptake protein TRKA; structur | 97.18 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 97.18 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 97.18 | |
| 2ew2_A | 316 | 2-dehydropantoate 2-reductase, putative; alpha-str | 97.17 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 97.15 | |
| 3gg2_A | 450 | Sugar dehydrogenase, UDP-glucose/GDP-mannose dehyd | 97.13 | |
| 1bg6_A | 359 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L | 97.1 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 97.1 | |
| 1dih_A | 273 | Dihydrodipicolinate reductase; oxidoreductase; HET | 97.08 | |
| 3c24_A | 286 | Putative oxidoreductase; YP_511008.1, structural g | 97.06 | |
| 7mdh_A | 375 | Protein (malate dehydrogenase); chloroplastic mala | 97.04 | |
| 3qha_A | 296 | Putative oxidoreductase; seattle structural genomi | 97.04 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 97.03 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 97.03 | |
| 3don_A | 277 | Shikimate dehydrogenase; alpha-beta structure, ros | 97.02 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 97.01 | |
| 1f0y_A | 302 | HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive | 97.0 | |
| 1y81_A | 138 | Conserved hypothetical protein; hyperthermophIle, | 97.0 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 97.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 96.96 | |
| 2h78_A | 302 | Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601 | 96.96 | |
| 1oi7_A | 288 | Succinyl-COA synthetase alpha chain; SCS, ligase, | 96.95 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 96.95 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 96.94 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.94 | |
| 3doj_A | 310 | AT3G25530, dehydrogenase-like protein; gamma-hydro | 96.93 | |
| 4huj_A | 220 | Uncharacterized protein; PSI-biology, nysgrc, stru | 96.92 | |
| 2d4a_B | 308 | Malate dehydrogenase; archaea, hyperthermophIle, o | 96.92 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 96.91 | |
| 3rui_A | 340 | Ubiquitin-like modifier-activating enzyme ATG7; au | 96.9 | |
| 2dpo_A | 319 | L-gulonate 3-dehydrogenase; structural genomics, N | 96.9 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 96.89 | |
| 1y8q_A | 346 | Ubiquitin-like 1 activating enzyme E1A; SUMO, hete | 96.89 | |
| 4f3y_A | 272 | DHPR, dihydrodipicolinate reductase; structural ge | 96.88 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 96.87 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 96.86 | |
| 3fbt_A | 282 | Chorismate mutase and shikimate 5-dehydrogenase fu | 96.84 | |
| 1p9o_A | 313 | Phosphopantothenoylcysteine synthetase; ligase; 2. | 96.82 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 96.81 | |
| 1y8q_B | 640 | Anthracycline-, ubiquitin-like 2 activating enzyme | 96.8 | |
| 3dr3_A | 337 | N-acetyl-gamma-glutamyl-phosphate reductase; csgid | 96.8 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 96.77 | |
| 2r00_A | 336 | Aspartate-semialdehyde dehydrogenase; conformation | 96.76 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 96.76 | |
| 4dll_A | 320 | 2-hydroxy-3-oxopropionate reductase; structural ge | 96.75 | |
| 2yv1_A | 294 | Succinyl-COA ligase [ADP-forming] subunit alpha; C | 96.75 | |
| 3g0o_A | 303 | 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine | 96.75 | |
| 3l6d_A | 306 | Putative oxidoreductase; structural genomics, prot | 96.72 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 96.71 | |
| 4gbj_A | 297 | 6-phosphogluconate dehydrogenase NAD-binding; stru | 96.7 | |
| 3obb_A | 300 | Probable 3-hydroxyisobutyrate dehydrogenase; struc | 96.68 | |
| 2ahr_A | 259 | Putative pyrroline carboxylate reductase; pyrrolin | 96.68 | |
| 3cky_A | 301 | 2-hydroxymethyl glutarate dehydrogenase; rossmann | 96.68 | |
| 3pwk_A | 366 | Aspartate-semialdehyde dehydrogenase; NADP binding | 96.66 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 96.66 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 96.65 | |
| 2y0c_A | 478 | BCEC, UDP-glucose dehydrogenase; oxidoreductase, c | 96.64 | |
| 3pdu_A | 287 | 3-hydroxyisobutyrate dehydrogenase family protein; | 96.64 | |
| 2hk9_A | 275 | Shikimate dehydrogenase; shikimate pathway, drug d | 96.64 | |
| 2nu8_A | 288 | Succinyl-COA ligase [ADP-forming] subunit alpha; c | 96.64 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 96.63 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 96.63 | |
| 3qsg_A | 312 | NAD-binding phosphogluconate dehydrogenase-like P; | 96.62 | |
| 4gsl_A | 615 | Ubiquitin-like modifier-activating enzyme ATG7; ub | 96.61 | |
| 2ep5_A | 350 | 350AA long hypothetical aspartate-semialdehyde deh | 96.59 | |
| 1ys4_A | 354 | Aspartate-semialdehyde dehydrogenase; oxidoreducta | 96.58 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 96.57 | |
| 4ezb_A | 317 | Uncharacterized conserved protein; structural geno | 96.56 | |
| 2q3e_A | 467 | UDP-glucose 6-dehydrogenase; hexamer, structural g | 96.56 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 96.55 | |
| 3dtt_A | 245 | NADP oxidoreductase; structural genomics, joint ce | 96.53 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 96.52 | |
| 2i6t_A | 303 | Ubiquitin-conjugating enzyme E2-like isoform A; L- | 96.52 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 96.51 | |
| 2yv2_A | 297 | Succinyl-COA synthetase alpha chain; COA-binding d | 96.5 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.5 | |
| 1obb_A | 480 | Maltase, alpha-glucosidase; glycosidase, sulfinic | 96.49 |
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-32 Score=270.38 Aligned_cols=228 Identities=12% Similarity=0.040 Sum_probs=186.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|++.|+++|++|++++|+..... + .+++++.+|+. .+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~---------------------~~~~~~~~Dl~-~~~~~~ 58 (311)
T 3m2p_A 2 SLKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I---------------------NDYEYRVSDYT-LEDLIN 58 (311)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------------------------CCEEEECCCC-HHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C---------------------CceEEEEcccc-HHHHHH
Confidence 478999999999999999999999999999999944322 1 37899999999 999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLLW 234 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~~s 234 (446)
+++++|+||||||..... ++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+.+.|+.+
T Consensus 59 ~~~~~d~Vih~a~~~~~~--~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~~s 136 (311)
T 3m2p_A 59 QLNDVDAVVHLAATRGSQ--GKISEFHDNEILTQNLYDACYENNISNIVYASTISAYSDETSLPWNEKELPLPDLMYGVS 136 (311)
T ss_dssp HTTTCSEEEECCCCCCSS--SCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCCGGGCSBCTTSCCCCSSHHHHH
T ss_pred hhcCCCEEEEccccCCCC--ChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccHHHhCCCCCCCCCCCCCCCCCchhHHH
Confidence 999999999999976543 6677889999999999999999999999999998774321 233445667889999
Q ss_pred HHHHHHHHHh----CCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHHHHHHHHhCC
Q 013273 235 KRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 235 K~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
|+.+|+++++ .|++++++||+++||++.... ....+.+.........++|++|+|++++.+++++
T Consensus 137 K~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~ 216 (311)
T 3m2p_A 137 KLACEHIGNIYSRKKGLCIKNLRFAHLYGFNEKNNYMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQE 216 (311)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEEEECEEECSCC--CCHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeCceeCcCCCCCCHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcC
Confidence 9999999875 799999999999999975411 1112222222334457899999999999999887
Q ss_pred CCCCCcEEEEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 300 ~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
. .+++||++++...++.++.+.+.+.+|.....
T Consensus 217 ~--~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~~ 249 (311)
T 3m2p_A 217 K--VSGTFNIGSGDALTNYEVANTINNAFGNKDNL 249 (311)
T ss_dssp T--CCEEEEECCSCEECHHHHHHHHHHHTTCTTCE
T ss_pred C--CCCeEEeCCCCcccHHHHHHHHHHHhCCCCcc
Confidence 5 58999999999999999999999999987543
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-33 Score=261.17 Aligned_cols=217 Identities=25% Similarity=0.314 Sum_probs=173.6
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCce-EEEEcCCCCh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKR 154 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v-~~v~~Dl~d~ 154 (446)
..+++|+|||||||||||++++++|+++|++|++++|+.++...+.. .++ +++.+|++
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~-------------------~~~~~~~~~Dl~-- 75 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE-------------------RGASDIVVANLE-- 75 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH-------------------TTCSEEEECCTT--
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh-------------------CCCceEEEcccH--
Confidence 34678899999999999999999999999999999999987765432 468 99999999
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
+.+.++++++|+||||||.... .++...+++|+.++.+++++|++.+++|||++||++.... +..+ .+...|+.+
T Consensus 76 ~~~~~~~~~~D~vi~~ag~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~--~~~~-~~~~~Y~~s 150 (236)
T 3e8x_A 76 EDFSHAFASIDAVVFAAGSGPH--TGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGTVDP--DQGP-MNMRHYLVA 150 (236)
T ss_dssp SCCGGGGTTCSEEEECCCCCTT--SCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTCSCG--GGSC-GGGHHHHHH
T ss_pred HHHHHHHcCCCEEEECCCCCCC--CCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCCCCC--CCCh-hhhhhHHHH
Confidence 7889999999999999997542 4556678999999999999999999999999999776332 1111 466789999
Q ss_pred HHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 013273 235 KRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 235 K~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~ 314 (446)
|+.+|.+++..|+++++||||++||+... ..+...........+++++|+|++++.++.++. ..+++||+.++.
T Consensus 151 K~~~e~~~~~~gi~~~~lrpg~v~~~~~~----~~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~v~~~~- 224 (236)
T 3e8x_A 151 KRLADDELKRSSLDYTIVRPGPLSNEEST----GKVTVSPHFSEITRSITRHDVAKVIAELVDQQH-TIGKTFEVLNGD- 224 (236)
T ss_dssp HHHHHHHHHHSSSEEEEEEECSEECSCCC----SEEEEESSCSCCCCCEEHHHHHHHHHHHTTCGG-GTTEEEEEEECS-
T ss_pred HHHHHHHHHHCCCCEEEEeCCcccCCCCC----CeEEeccCCCcccCcEeHHHHHHHHHHHhcCcc-ccCCeEEEeCCC-
Confidence 99999999999999999999999998532 112222222224578999999999999999876 678999998884
Q ss_pred CChhhHHHHH
Q 013273 315 APLTPMEELL 324 (446)
Q Consensus 315 ~t~~~i~e~l 324 (446)
.++.++.+.+
T Consensus 225 ~~~~e~~~~i 234 (236)
T 3e8x_A 225 TPIAKVVEQL 234 (236)
T ss_dssp EEHHHHHHTC
T ss_pred cCHHHHHHHh
Confidence 5555555443
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-33 Score=279.89 Aligned_cols=247 Identities=14% Similarity=0.056 Sum_probs=192.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|+|||||||||||++|++.|+++|++|++++|+..........+.... +.....+++++.+|+.|.+++
T Consensus 23 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 23 FSPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLV--------STEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTS--------CHHHHTTEEEEECCTTCHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhcc--------ccccCCceEEEEccCCCHHHH
Confidence 457899999999999999999999999999999997754443333332210 000015799999999999999
Q ss_pred HHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
.++++++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+.+.
T Consensus 95 ~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~ 174 (351)
T 3ruf_A 95 EQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTYGDHPALPKVEENIGNPLSP 174 (351)
T ss_dssp HHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred HHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhcCCCCCCCCccCCCCCCCCh
Confidence 9999999999999996432 2234455678999999999999999999999999998774322 23344566788
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc---------------cccceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~---------------~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|+.+|++++. .|+++++|||+++||++.... ....+.+...+.....+||++|+|++
T Consensus 175 Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 254 (351)
T 3ruf_A 175 YAVTKYVNEIYAQVYARTYGFKTIGLRYFNVFGRRQDPNGAYAAVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQM 254 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECSEESTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHhCCCEEEEeeCceeCcCCCCCcchhhHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHH
Confidence 99999999998873 699999999999999975321 01111121223334478999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++.++.++....+++|||+++...++.++.+++.+++|...
T Consensus 255 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 295 (351)
T 3ruf_A 255 NILSALAKDSAKDNIYNVAVGDRTTLNELSGYIYDELNLIH 295 (351)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHTTC
T ss_pred HHHHHhhccccCCCEEEeCCCCcccHHHHHHHHHHHhCccc
Confidence 99999884335789999999999999999999999999843
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-33 Score=276.80 Aligned_cols=231 Identities=17% Similarity=0.082 Sum_probs=185.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+|+|||||||||||++|++.|+++|++|++++|+... .+++++.+|+.|.+.
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------------------~~~~~~~~Dl~d~~~ 70 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------------------TGGEEVVGSLEDGQA 70 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------------------SCCSEEESCTTCHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------------------CCccEEecCcCCHHH
Confidence 4567899999999999999999999999999999998742 468899999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC-------CCchhhhchhh
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF-------GFPAAILNLFW 229 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~-------~~~~~~~~~~~ 229 (446)
+.+++.++|+|||||+.......++...+++|+.++.+++++|++.+++||||+||.+++.. ..++....+.+
T Consensus 71 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~~~~ 150 (347)
T 4id9_A 71 LSDAIMGVSAVLHLGAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASSGEVYPENRPEFLPVTEDHPLCPNS 150 (347)
T ss_dssp HHHHHTTCSEEEECCCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGTTTTSCSSSSBCTTSCCCCCS
T ss_pred HHHHHhCCCEEEECCcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHHhCCCCCCCCCcCCCCCCCCCC
Confidence 99999999999999997655444456778999999999999999999999999999877543 12334456778
Q ss_pred HHHHHHHHHHHHHH----hCCCCEEEEecCCcc-------------CCCcccc----------------------cccce
Q 013273 230 GVLLWKRKAEEALI----ASGLPYTIVRPGGME-------------RPTDAYK----------------------ETHNI 270 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~-------------gp~~~~~----------------------~~~~~ 270 (446)
.|+.+|+.+|++++ +.|+++++|||+++| ||+.... ....+
T Consensus 151 ~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (347)
T 4id9_A 151 PYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAELLQSRDIGEPS 230 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHHHHHHHCCSSCC
T ss_pred hHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHHHHHHHHcCCCe
Confidence 89999999999986 479999999999999 7752210 01111
Q ss_pred eecccCcccCCc----cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 271 TLSQEDTLFGGQ----VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 271 ~~~~~~~~~~~~----v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+.........+ +|++|+|++++.++.++. ..+++|||+++...++.++.+++.+++|....
T Consensus 231 ~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 296 (347)
T 4id9_A 231 HILARNENGRPFRMHITDTRDMVAGILLALDHPE-AAGGTFNLGADEPADFAALLPKIAALTGLPIV 296 (347)
T ss_dssp EEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGG-GTTEEEEESCSSCEEHHHHHHHHHHHHCCCEE
T ss_pred EEeCCCCcccCCccCcEeHHHHHHHHHHHhcCcc-cCCCeEEECCCCcccHHHHHHHHHHHhCCCCc
Confidence 111122233456 999999999999999875 45899999999999999999999999987543
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-32 Score=254.64 Aligned_cols=211 Identities=18% Similarity=0.135 Sum_probs=166.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|||||||||||++|++.|+++|++|++++|+.++... ...+++++.+|++|.+++.
T Consensus 3 ~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--------------------~~~~~~~~~~Dl~d~~~~~ 62 (227)
T 3dhn_A 3 KVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKI--------------------ENEHLKVKKADVSSLDEVC 62 (227)
T ss_dssp CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCC--------------------CCTTEEEECCCTTCHHHHH
T ss_pred CCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchh--------------------ccCceEEEEecCCCHHHHH
Confidence 45799999999999999999999999999999999865321 1167999999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----CchhhhchhhHHHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGVLLW 234 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----~~~~~~~~~~~Y~~s 234 (446)
++++++|+||||||.... ....+++|+.++.++++++++.+++||||+||.++.... ..+....+...|+.+
T Consensus 63 ~~~~~~d~vi~~a~~~~~----~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~~~~~~~~~~~~~~p~~~Y~~s 138 (227)
T 3dhn_A 63 EVCKGADAVISAFNPGWN----NPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAGSLFIAPGLRLMDSGEVPENILPGV 138 (227)
T ss_dssp HHHTTCSEEEECCCC----------CCSHHHHHHHHHHHHHHHTTCSEEEEECCSTTSEEETTEEGGGTTCSCGGGHHHH
T ss_pred HHhcCCCEEEEeCcCCCC----ChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChhhccCCCCCccccCCcchHHHHHHH
Confidence 999999999999986422 123688999999999999999999999999998763221 122334567789999
Q ss_pred HHHHHHHHH----hCCCCEEEEecCCccCCCcccccccceeecccCcc----cCCccCHHHHHHHHHHHHhCCCCCCCcE
Q 013273 235 KRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL----FGGQVSNLQVAELLACMAKNRSLSYCKV 306 (446)
Q Consensus 235 K~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~----~~~~v~~~DvA~ai~~ll~~~~~~~~~v 306 (446)
|+.+|.+++ +.|+++++|||+++||++.... .+.......+ ...++|++|+|++++.+++++. ..+++
T Consensus 139 K~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~ai~~~l~~~~-~~g~~ 214 (227)
T 3dhn_A 139 KALGEFYLNFLMKEKEIDWVFFSPAADMRPGVRTG---RYRLGKDDMIVDIVGNSHISVEDYAAAMIDELEHPK-HHQER 214 (227)
T ss_dssp HHHHHHHHHTGGGCCSSEEEEEECCSEEESCCCCC---CCEEESSBCCCCTTSCCEEEHHHHHHHHHHHHHSCC-CCSEE
T ss_pred HHHHHHHHHHHhhccCccEEEEeCCcccCCCcccc---ceeecCCCcccCCCCCcEEeHHHHHHHHHHHHhCcc-ccCcE
Confidence 999996654 4799999999999999965321 1111111111 1468999999999999999987 78999
Q ss_pred EEEecCCCCCh
Q 013273 307 VEVIAETTAPL 317 (446)
Q Consensus 307 ~ni~~~~~~t~ 317 (446)
||+++++..++
T Consensus 215 ~~~~~~~~~~~ 225 (227)
T 3dhn_A 215 FTIGYLEHHHH 225 (227)
T ss_dssp EEEECCSCCC-
T ss_pred EEEEeehhccc
Confidence 99999987654
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-32 Score=270.86 Aligned_cols=232 Identities=16% Similarity=0.098 Sum_probs=177.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|||||||||||++|+++|+++|++|++++|+..+...+. ..+++++.+|+.|.+++.
T Consensus 12 ~~M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-------------------~~~~~~~~~Dl~d~~~~~ 72 (342)
T 2x4g_A 12 AHVKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-------------------YLEPECRVAEMLDHAGLE 72 (342)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-------------------GGCCEEEECCTTCHHHHH
T ss_pred cCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-------------------cCCeEEEEecCCCHHHHH
Confidence 3469999999999999999999999999999999876543210 137899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------Cchhhhch----h
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNL----F 228 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~~----~ 228 (446)
++++++|+||||||.......++...+++|+.++.+++++|++++++||||+||.+++... .++.+..+ .
T Consensus 73 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~~p~~~~~ 152 (342)
T 2x4g_A 73 RALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGK 152 (342)
T ss_dssp HHTTTCSEEEEC------------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGGGSCCCTTSSCBCTTCCCSSCCTTS
T ss_pred HHHcCCCEEEECCccCcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHHhhCcCCCCCCCCCCCCCCcccccc
Confidence 9999999999999975544456677889999999999999999999999999998774321 22333445 6
Q ss_pred hHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCCc-cccccccee--eccc-----CcccCCccCHHHHHHHHHHHHh
Q 013273 229 WGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTD-AYKETHNIT--LSQE-----DTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~~-~~~~~~~~~--~~~~-----~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
..|+.+|+.+|.+++. .|+++++|||+++||++. ... ...+. +..+ ......++|++|+|++++.+++
T Consensus 153 ~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~ 231 (342)
T 2x4g_A 153 SSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPT-TGRVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLMALE 231 (342)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCSSCS-TTHHHHHHHTTCCCEEECCEEEEEEHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCcccc-HHHHHHHHHcCCCccccCCCcceeeHHHHHHHHHHHHh
Confidence 7899999999999874 499999999999999975 210 00000 0000 1123358999999999999998
Q ss_pred CCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 298 ~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++. . +++||++++. .++.++.+++.+++|....
T Consensus 232 ~~~-~-g~~~~v~~~~-~s~~e~~~~i~~~~g~~~~ 264 (342)
T 2x4g_A 232 RGR-I-GERYLLTGHN-LEMADLTRRIAELLGQPAP 264 (342)
T ss_dssp HSC-T-TCEEEECCEE-EEHHHHHHHHHHHHTCCCC
T ss_pred CCC-C-CceEEEcCCc-ccHHHHHHHHHHHhCCCCC
Confidence 875 3 8899999999 9999999999999987643
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.98 E-value=2.5e-32 Score=271.36 Aligned_cols=245 Identities=13% Similarity=0.086 Sum_probs=189.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|..+|+||||||+||||++|++.|+++|++|++++|+........+.+... .+ .++.++.+|++|.++
T Consensus 2 M~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~----~~~~~~~~Dl~d~~~ 69 (341)
T 3enk_A 2 MSTKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKI--------TG----KTPAFHETDVSDERA 69 (341)
T ss_dssp CCSSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHH--------HS----CCCEEECCCTTCHHH
T ss_pred CCCCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhh--------cC----CCceEEEeecCCHHH
Confidence 345689999999999999999999999999999999876655544444322 01 578999999999999
Q ss_pred HHHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhch
Q 013273 157 IEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 157 ~~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
+.++++ ++|+||||||.... ...++...+++|+.++.++++++++.++++|||+||.+++... .++.+..+
T Consensus 70 ~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~ 149 (341)
T 3enk_A 70 LARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSATVYGVPERSPIDETFPLSA 149 (341)
T ss_dssp HHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGBCSCSSSSBCTTSCCBC
T ss_pred HHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecceEecCCCCCCCCCCCCCCC
Confidence 999997 89999999996532 2223345678899999999999999999999999998774321 22344556
Q ss_pred hhHHHHHHHHHHHHHHh----C-CCCEEEEecCCccCCCccc--c--------------------cccceeecc------
Q 013273 228 FWGVLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDAY--K--------------------ETHNITLSQ------ 274 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~----~-gl~~tivRPg~v~gp~~~~--~--------------------~~~~~~~~~------ 274 (446)
...|+.+|+.+|++++. . |++++++||+++||++... . ....+.+..
T Consensus 150 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 229 (341)
T 3enk_A 150 TNPYGQTKLMAEQILRDVEAADPSWRVATLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTP 229 (341)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSST
T ss_pred CChhHHHHHHHHHHHHHHhhcCCCceEEEEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCC
Confidence 77899999999999874 3 5999999999999985311 0 001111111
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+....+++|++|+|++++.++++.. ...+++|||+++...++.++.+.+.+++|....
T Consensus 230 ~g~~~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 289 (341)
T 3enk_A 230 DGTGVRDYIHVVDLARGHIAALDALERRDASLTVNLGTGRGYSVLEVVRAFEKASGRAVP 289 (341)
T ss_dssp TSSCEECEEEHHHHHHHHHHHHHHHHHHTSCEEEEESCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred CCCeeEeeEEHHHHHHHHHHHHHhhhcCCcceEEEeCCCCceeHHHHHHHHHHHhCCCcc
Confidence 22333468999999999999998621 135899999999999999999999999987654
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.98 E-value=2e-31 Score=249.08 Aligned_cols=211 Identities=21% Similarity=0.311 Sum_probs=173.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-hhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~~~~~ 159 (446)
|+|||||||||||++++++|+++|++|++++|+.++... ..+++++.+|++| .+++.+
T Consensus 1 M~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---------------------~~~~~~~~~D~~d~~~~~~~ 59 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQ---------------------YNNVKAVHFDVDWTPEEMAK 59 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCC---------------------CTTEEEEECCTTSCHHHHHT
T ss_pred CeEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhh---------------------cCCceEEEecccCCHHHHHH
Confidence 589999999999999999999999999999999865321 1679999999999 999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC--CchhhhchhhHHHHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG--FPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~--~~~~~~~~~~~Y~~sK~~ 237 (446)
+++++|+||||||... ...+++|+.++.+++++|++.++++||++||.++.... .+ ....+...|+.+|+.
T Consensus 60 ~~~~~d~vi~~ag~~~------~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~e-~~~~~~~~Y~~sK~~ 132 (219)
T 3dqp_A 60 QLHGMDAIINVSGSGG------KSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFSLQPEKWIG-AGFDALKDYYIAKHF 132 (219)
T ss_dssp TTTTCSEEEECCCCTT------SSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTTTCGGGCCS-HHHHHTHHHHHHHHH
T ss_pred HHcCCCEEEECCcCCC------CCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccccCCCcccc-cccccccHHHHHHHH
Confidence 9999999999999754 23678999999999999999999999999998763321 11 334567889999999
Q ss_pred HHHHH-HhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCC
Q 013273 238 AEEAL-IASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAP 316 (446)
Q Consensus 238 ~E~~l-~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t 316 (446)
+|+++ +..|+++++||||++||+... ..+.+. .....+++++|+|++++.++.++. ..+++|||.++.
T Consensus 133 ~e~~~~~~~~i~~~ilrp~~v~g~~~~----~~~~~~---~~~~~~i~~~Dva~~i~~~l~~~~-~~g~~~~i~~g~--- 201 (219)
T 3dqp_A 133 ADLYLTKETNLDYTIIQPGALTEEEAT----GLIDIN---DEVSASNTIGDVADTIKELVMTDH-SIGKVISMHNGK--- 201 (219)
T ss_dssp HHHHHHHSCCCEEEEEEECSEECSCCC----SEEEES---SSCCCCEEHHHHHHHHHHHHTCGG-GTTEEEEEEECS---
T ss_pred HHHHHHhccCCcEEEEeCceEecCCCC----CccccC---CCcCCcccHHHHHHHHHHHHhCcc-ccCcEEEeCCCC---
Confidence 99999 779999999999999998532 122221 445578999999999999999876 568999998875
Q ss_pred hhhHHHHHHhccCCC
Q 013273 317 LTPMEELLAKIPSQR 331 (446)
Q Consensus 317 ~~~i~e~l~~i~~~~ 331 (446)
..+.|++....+..
T Consensus 202 -~~~~e~~~~~~~~~ 215 (219)
T 3dqp_A 202 -TAIKEALESLLEHH 215 (219)
T ss_dssp -EEHHHHHHTTTTTC
T ss_pred -ccHHHHHHHHHHhh
Confidence 56666666655543
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.98 E-value=6.1e-32 Score=269.36 Aligned_cols=241 Identities=13% Similarity=0.077 Sum_probs=184.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+|+|||||||||||++|+++|+++| ++|++++|....... ..+ ......++++++.+|+.|.+
T Consensus 22 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~--~~l-----------~~~~~~~~~~~~~~Dl~d~~ 88 (346)
T 4egb_A 22 SNAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNL--NNV-----------KSIQDHPNYYFVKGEIQNGE 88 (346)
T ss_dssp --CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCG--GGG-----------TTTTTCTTEEEEECCTTCHH
T ss_pred cCCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccch--hhh-----------hhhccCCCeEEEEcCCCCHH
Confidence 566899999999999999999999999 778888876421110 000 01112368999999999999
Q ss_pred cHHHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------Cchhhh
Q 013273 156 QIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAIL 225 (446)
Q Consensus 156 ~~~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~ 225 (446)
.+.+++++ +|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+.
T Consensus 89 ~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~ 168 (346)
T 4egb_A 89 LLEHVIKERDVQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTDEVYGSLGKTGRFTEETPL 168 (346)
T ss_dssp HHHHHHHHHTCCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEGGGGCCCCSSCCBCTTSCC
T ss_pred HHHHHHhhcCCCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCchHHhCCCCcCCCcCCCCCC
Confidence 99999987 9999999996532 2345667789999999999999999999999999998774322 233445
Q ss_pred chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.+...|+.+|+.+|.+++. .|+++++|||+++|||++... ....+.+...+....++||++|+|+
T Consensus 169 ~p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 248 (346)
T 4egb_A 169 APNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPEKLIPLMVTNALEGKKLPLYGDGLNVRDWLHVTDHCS 248 (346)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCCEEETTSCCEECEEEHHHHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCccchHHHHHHHHHcCCCceeeCCCCeEEeeEEHHHHHH
Confidence 6678899999999999874 699999999999999975311 1111222222334457899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+++.++.++. .+++|||+++...++.++.+++.+++|....
T Consensus 249 a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 289 (346)
T 4egb_A 249 AIDVVLHKGR--VGEVYNIGGNNEKTNVEVVEQIITLLGKTKK 289 (346)
T ss_dssp HHHHHHHHCC--TTCEEEECCSCCEEHHHHHHHHHHHHTCCGG
T ss_pred HHHHHHhcCC--CCCEEEECCCCceeHHHHHHHHHHHhCCCcc
Confidence 9999999875 5889999999999999999999999988643
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.98 E-value=3.5e-31 Score=251.17 Aligned_cols=227 Identities=27% Similarity=0.385 Sum_probs=177.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++|+||||||+||||++++++|+++ |++|++++|++++...+ ..+++++.+|++|.++
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--------------------~~~~~~~~~D~~d~~~ 62 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------------GGEADVFIGDITDADS 62 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------------TCCTTEEECCTTSHHH
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--------------------CCCeeEEEecCCCHHH
Confidence 4679999999999999999999999 89999999987654321 1467899999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCc---------------cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc
Q 013273 157 IEPALGNASVVICCIGASEKE---------------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~---------------~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+.++++++|+||||||..... ..++...+++|+.++.++++++++.+++|||++||.++.....+
T Consensus 63 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~~~~~~ 142 (253)
T 1xq6_A 63 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP 142 (253)
T ss_dssp HHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG
T ss_pred HHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHHHcCCCEEEEEcCccCCCCCCc
Confidence 999999999999999864321 11122446899999999999999999999999999876432222
Q ss_pred hhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcc---cCCccCHHHHHHHHHHHHhC
Q 013273 222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTL---FGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~---~~~~v~~~DvA~ai~~ll~~ 298 (446)
.... ....|+.+|+.+|.++++.|+++++||||++||+..... .+.......+ ...+++++|+|++++.++.+
T Consensus 143 ~~~~-~~~~y~~sK~~~e~~~~~~~i~~~~vrpg~v~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Dva~~~~~~~~~ 218 (253)
T 1xq6_A 143 LNKL-GNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELLVGKDDELLQTDTKTVPRADVAEVCIQALLF 218 (253)
T ss_dssp GGGG-GGCCHHHHHHHHHHHHHTSSSCEEEEEECEEECSCSSSS---CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred cccc-cchhHHHHHHHHHHHHHhCCCceEEEecceeecCCcchh---hhhccCCcCCcCCCCcEEcHHHHHHHHHHHHcC
Confidence 1111 113588899999999999999999999999999864321 1111111111 23579999999999999988
Q ss_pred CCCCCCcEEEEecCC---CCChhhHHHHHHhccCC
Q 013273 299 RSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~---~~t~~~i~e~l~~i~~~ 330 (446)
+. ..+++|||.++. ..++.++.+++.++.|+
T Consensus 219 ~~-~~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g~ 252 (253)
T 1xq6_A 219 EE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSR 252 (253)
T ss_dssp GG-GTTEEEEEEECCTTTSCCCCCHHHHHHTCCCC
T ss_pred cc-ccCCEEEecCCCcCCCCCHHHHHHHHHHHhCC
Confidence 65 468899999975 48999999999999876
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.5e-32 Score=267.08 Aligned_cols=231 Identities=16% Similarity=0.077 Sum_probs=183.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++|++|++++|+....... ...+++++.+|+.|.+ +.++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dl~d~~-~~~~ 60 (312)
T 3ko8_A 1 MRIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREF-------------------VNPSAELHVRDLKDYS-WGAG 60 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGG-------------------SCTTSEEECCCTTSTT-TTTT
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhh-------------------cCCCceEEECccccHH-HHhh
Confidence 5899999999999999999999999999999987543221 1267899999999998 8888
Q ss_pred hcCCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHHH
Q 013273 161 LGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL 233 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~~ 233 (446)
+.+ |+||||||... ....++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+.+.|+.
T Consensus 61 ~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~p~~~Y~~ 139 (312)
T 3ko8_A 61 IKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQTGVRTVVFASSSTVYGDADVIPTPEEEPYKPISVYGA 139 (312)
T ss_dssp CCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCCCSHHHH
T ss_pred cCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeCcHHHhCCCCCCCCCCCCCCCCCChHHH
Confidence 888 99999999542 23344556688999999999999999999999999998774321 23344566788999
Q ss_pred HHHHHHHHHHh----CCCCEEEEecCCccCCCccccc----------c-cceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 234 WKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE----------T-HNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 234 sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~----------~-~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
+|+.+|.+++. .|+++++|||+++|||+..... . ..+.+.........++|++|+|++++.++++
T Consensus 140 sK~~~e~~~~~~~~~~g~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~ 219 (312)
T 3ko8_A 140 AKAAGEVMCATYARLFGVRCLAVRYANVVGPRLRHGVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKK 219 (312)
T ss_dssp HHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCSSHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEeeccccCcCCCCChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHh
Confidence 99999998864 6999999999999999743210 0 1111222233445789999999999999987
Q ss_pred ---CCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 299 ---RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 299 ---~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.. ..+++||++++...++.++.+++.+++|....
T Consensus 220 ~~~~~-~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 256 (312)
T 3ko8_A 220 FEEMD-APFLALNVGNVDAVRVLDIAQIVAEVLGLRPE 256 (312)
T ss_dssp HHHSC-CSEEEEEESCSSCEEHHHHHHHHHHHHTCCCE
T ss_pred ccccC-CCCcEEEEcCCCceeHHHHHHHHHHHhCCCCc
Confidence 33 46889999999999999999999999987653
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.3e-32 Score=277.00 Aligned_cols=238 Identities=16% Similarity=0.190 Sum_probs=186.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC-Ch
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~ 154 (446)
.+++|+|||||||||||++|+++|+++ |++|++++|+.++...+. ...+++++.+|++ |.
T Consensus 21 ~m~~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~v~~~~~Dl~~d~ 82 (372)
T 3slg_A 21 SMKAKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLV------------------KHERMHFFEGDITINK 82 (372)
T ss_dssp --CCCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGG------------------GSTTEEEEECCTTTCH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhc------------------cCCCeEEEeCccCCCH
Confidence 356789999999999999999999998 999999999886544321 1268999999999 99
Q ss_pred hcHHHHhcCCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC-----chhhh--
Q 013273 155 VQIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAAIL-- 225 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~-----~~~~~-- 225 (446)
+.+.+++.++|+||||||..... ..++...+++|+.++.+++++|++.+ +||||+||.+++.... ++...
T Consensus 83 ~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~ 161 (372)
T 3slg_A 83 EWVEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKYG-KHLVFPSTSEVYGMCADEQFDPDASALT 161 (372)
T ss_dssp HHHHHHHHHCSEEEECBCCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHT-CEEEEECCGGGGBSCCCSSBCTTTCCEE
T ss_pred HHHHHHhccCCEEEEcCccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhC-CcEEEeCcHHHhCCCCCCCCCccccccc
Confidence 99999999999999999965432 23445667899999999999999999 8999999987744321 11111
Q ss_pred -----chhhHHHHHHHHHHHHHHhC---CCCEEEEecCCccCCCcccc-------------------cccceeecccCcc
Q 013273 226 -----NLFWGVLLWKRKAEEALIAS---GLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTL 278 (446)
Q Consensus 226 -----~~~~~Y~~sK~~~E~~l~~~---gl~~tivRPg~v~gp~~~~~-------------------~~~~~~~~~~~~~ 278 (446)
.+.+.|+.+|+.+|++++.. |+++++|||+++||+++... ....+.+......
T Consensus 162 ~~p~~~p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 241 (372)
T 3slg_A 162 YGPINKPRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENISLVDGGSQ 241 (372)
T ss_dssp ECCTTCTTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEEEGGGGCC
T ss_pred cCCCCCCCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcEEeCCCce
Confidence 46668999999999999865 99999999999999975310 1111222222233
Q ss_pred cCCccCHHHHHHHHHHHHhCCCC-CCCcEEEEecC-CCCChhhHHHHHHhccCCCCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAE-TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~ 333 (446)
...++|++|+|++++.+++++.. ..+++|||+++ ...++.++.+++.+++|....
T Consensus 242 ~~~~i~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~~s~~e~~~~i~~~~g~~~~ 298 (372)
T 3slg_A 242 KRAFTYVDDGISALMKIIENSNGVATGKIYNIGNPNNNFSVRELANKMLELAAEFPE 298 (372)
T ss_dssp EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTCEEEHHHHHHHHHHHHHHCTT
T ss_pred EEEEEEHHHHHHHHHHHHhcccCcCCCceEEeCCCCCCccHHHHHHHHHHHhCCCcc
Confidence 44789999999999999998631 35899999994 789999999999999987654
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=2.2e-31 Score=269.54 Aligned_cols=233 Identities=15% Similarity=0.035 Sum_probs=184.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|||||||||||++|+++|+++|++|++++|+..+.... ...+++++.+|+.|.+++.
T Consensus 28 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-------------------~~~~v~~~~~Dl~d~~~~~ 88 (379)
T 2c5a_A 28 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-------------------DMFCDEFHLVDLRVMENCL 88 (379)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-------------------GGTCSEEEECCTTSHHHHH
T ss_pred cCCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhh-------------------ccCCceEEECCCCCHHHHH
Confidence 568999999999999999999999999999999987542210 0147899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCc---cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----------Cchh--
Q 013273 159 PALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----------FPAA-- 223 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~---~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----------~~~~-- 223 (446)
+++.++|+||||||..... ..++...+++|+.++.+++++|++.+++||||+||.+++... .+++
T Consensus 89 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~~V~~SS~~v~~~~~~~~~~~~~~~E~~~~ 168 (379)
T 2c5a_A 89 KVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESDAW 168 (379)
T ss_dssp HHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGGGS
T ss_pred HHhCCCCEEEECceecCcccccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEeehheeCCCCCCCccCCCcCcccCC
Confidence 9999999999999965321 344556788999999999999999999999999998763321 1111
Q ss_pred hhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc---------------ccc-eeecccCcccCCcc
Q 013273 224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THN-ITLSQEDTLFGGQV 283 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~---------------~~~-~~~~~~~~~~~~~v 283 (446)
...+...|+.+|+.+|.+++. .|+++++|||+++||+++.... ... +.+.........++
T Consensus 169 ~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i 248 (379)
T 2c5a_A 169 PAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFT 248 (379)
T ss_dssp SBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEECCE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCcccccccHHHHHHHHHHhCCCceEEeCCCCeeEEEE
Confidence 345567899999999998863 6999999999999999653210 011 11122223344789
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
|++|+|++++.+++++. +++|||+++...++.++.+++.+++|....
T Consensus 249 ~v~Dva~ai~~~l~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 295 (379)
T 2c5a_A 249 FIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLP 295 (379)
T ss_dssp EHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCC
T ss_pred EHHHHHHHHHHHhhccC---CCeEEeCCCCccCHHHHHHHHHHHhCCCCc
Confidence 99999999999998763 789999999999999999999999987643
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.97 E-value=6.3e-32 Score=262.56 Aligned_cols=227 Identities=18% Similarity=0.130 Sum_probs=180.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+||||| +||||++|++.|+++|++|++++|+.++. ..+++++.+|+.|.+.+.
T Consensus 2 ~~~~ilVtG-aG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----------------------~~~~~~~~~Dl~d~~~~~ 57 (286)
T 3gpi_A 2 SLSKILIAG-CGDLGLELARRLTAQGHEVTGLRRSAQPM-----------------------PAGVQTLIADVTRPDTLA 57 (286)
T ss_dssp CCCCEEEEC-CSHHHHHHHHHHHHTTCCEEEEECTTSCC-----------------------CTTCCEEECCTTCGGGCT
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCcccc-----------------------ccCCceEEccCCChHHHH
Confidence 357899999 59999999999999999999999987541 167899999999999999
Q ss_pred HHhcC-CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHH
Q 013273 159 PALGN-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL 232 (446)
Q Consensus 159 ~a~~~-~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~ 232 (446)
+++.+ +|+|||+||... .++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+.+.|+
T Consensus 58 ~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~p~~~Y~ 134 (286)
T 3gpi_A 58 SIVHLRPEILVYCVAASE---YSDEHYRLSYVEGLRNTLSALEGAPLQHVFFVSSTGVYGQEVEEWLDEDTPPIAKDFSG 134 (286)
T ss_dssp TGGGGCCSEEEECHHHHH---HC-----CCSHHHHHHHHHHTTTSCCCEEEEEEEGGGCCCCCSSEECTTSCCCCCSHHH
T ss_pred HhhcCCCCEEEEeCCCCC---CCHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEcccEEEcCCCCCCCCCCCCCCCCChhh
Confidence 99987 999999998643 34566788999999999999999999999999998874322 2334456678899
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCccCCCcccccc--cceeecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEE
Q 013273 233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEV 309 (446)
Q Consensus 233 ~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~--~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni 309 (446)
.+|+.+|++ ++. +++++|||+++||++...... .............+++|++|+|++++.+++++. ...+++||+
T Consensus 135 ~sK~~~E~~-~~~-~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~ 212 (286)
T 3gpi_A 135 KRMLEAEAL-LAA-YSSTILRFSGIYGPGRLRMIRQAQTPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIV 212 (286)
T ss_dssp HHHHHHHHH-GGG-SSEEEEEECEEEBTTBCHHHHHTTCGGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTSCCCSEEEE
T ss_pred HHHHHHHHH-Hhc-CCeEEEecccccCCCchhHHHHHHhcccCCCcCceeEEEEHHHHHHHHHHHHhhhccCCCCceEEE
Confidence 999999999 777 999999999999997542100 000111223345578999999999999999841 145899999
Q ss_pred ecCCCCChhhHHHHHHhccCCCCCC
Q 013273 310 IAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 310 ~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
+++...++.++.+++.+++|.....
T Consensus 213 ~~~~~~s~~e~~~~i~~~~g~~~~~ 237 (286)
T 3gpi_A 213 TDNQPLPVHDLLRWLADRQGIAYPA 237 (286)
T ss_dssp CCSCCEEHHHHHHHHHHHTTCCCCC
T ss_pred eCCCCCCHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999999986543
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.3e-31 Score=264.20 Aligned_cols=248 Identities=13% Similarity=0.037 Sum_probs=186.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+|+|||||||||||++|++.|+++|++|++++|+........+.+... +.. ....+++++.+|+.|.+++
T Consensus 25 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~Dl~d~~~~ 96 (352)
T 1sb8_A 25 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSL-VSE-------KQWSNFKFIQGDIRNLDDC 96 (352)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHH-SCH-------HHHTTEEEEECCTTSHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhh-ccc-------ccCCceEEEECCCCCHHHH
Confidence 35679999999999999999999999999999999764221111111110 000 0015799999999999999
Q ss_pred HHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 158 EPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
.+++.++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+...
T Consensus 97 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~E~~~~~~~~~ 176 (352)
T 1sb8_A 97 NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP 176 (352)
T ss_dssp HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred HHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHhcCCCCCCCCCCCCCCCCCCh
Confidence 9999999999999996432 2234556788999999999999999999999999998774322 22233456778
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|+.+|.+++. .|+++++|||+++||++..... ...+.+.........++|++|+|++
T Consensus 177 Y~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a 256 (352)
T 1sb8_A 177 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 256 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEEECceeCcCCCCCcchhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHH
Confidence 99999999999863 5999999999999999653210 0011111122234468999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhcc---CCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP---SQRAE 333 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~---~~~~~ 333 (446)
++.++.+.....+++|||+++...++.++.+++.+++ |....
T Consensus 257 ~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~~~~g~~~~ 301 (352)
T 1sb8_A 257 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGVSYH 301 (352)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHhccccCCCceEEeCCCCCccHHHHHHHHHHHHHhcCCCCC
Confidence 9999987422468999999999999999999999999 76543
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-31 Score=262.78 Aligned_cols=230 Identities=15% Similarity=0.070 Sum_probs=179.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
||+|||||||||||++|+++|+++| .|++++| +...... ...+++++.+|+.| +++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g-~~v~~~~~~~~~~~~--------------------~~~~~~~~~~Dl~~-~~~~ 58 (313)
T 3ehe_A 1 MSLIVVTGGAGFIGSHVVDKLSESN-EIVVIDNLSSGNEEF--------------------VNEAARLVKADLAA-DDIK 58 (313)
T ss_dssp --CEEEETTTSHHHHHHHHHHTTTS-CEEEECCCSSCCGGG--------------------SCTTEEEECCCTTT-SCCH
T ss_pred CCEEEEECCCchHHHHHHHHHHhCC-CEEEEEcCCCCChhh--------------------cCCCcEEEECcCCh-HHHH
Confidence 4689999999999999999999999 5555554 3332211 12579999999999 9999
Q ss_pred HHhcCCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 159 PALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
+++.++|+|||||+... ....++...+++|+.++.+++++|++.++++|||+||.+++... .++.+..+.+.|
T Consensus 59 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~~~~Y 138 (313)
T 3ehe_A 59 DYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRKAGVSRIVFTSTSTVYGEAKVIPTPEDYPTHPISLY 138 (313)
T ss_dssp HHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEECCGGGGCSCSSSSBCTTSCCCCCSHH
T ss_pred HHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEeCchHHhCcCCCCCCCCCCCCCCCCHH
Confidence 99999999999998542 23445566788999999999999999999999999998774321 223345667789
Q ss_pred HHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc----------cc-cceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 232 LLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK----------ET-HNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 232 ~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~----------~~-~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
+.+|..+|.+++ +.|++++++||+++||+++... .. ..+.+........+++|++|+|++++.++
T Consensus 139 ~~sK~~~e~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~ 218 (313)
T 3ehe_A 139 GASKLACEALIESYCHTFDMQAWIYRFANVIGRRSTHGVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGL 218 (313)
T ss_dssp HHHHHHHHHHHHHHHHHTTCEEEEEECSCEESTTCCCSHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHhcCCCEEEEeeccccCcCCCcChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHh
Confidence 999999999886 3799999999999999975421 01 11222223334557899999999999999
Q ss_pred hCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 297 ~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++. ..+++|||+++...++.++.+++.+.+|....
T Consensus 219 ~~~--~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 253 (313)
T 3ehe_A 219 RGD--ERVNIFNIGSEDQIKVKRIAEIVCEELGLSPR 253 (313)
T ss_dssp TCC--SSEEEEECCCSCCEEHHHHHHHHHHHTTCCCE
T ss_pred ccC--CCCceEEECCCCCeeHHHHHHHHHHHhCCCCc
Confidence 843 45889999999999999999999999987653
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.97 E-value=2.6e-31 Score=266.93 Aligned_cols=242 Identities=14% Similarity=0.025 Sum_probs=185.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHH--CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLK--LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~--~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+|+|||||||||||++|++.|++ .|++|++++|+...........+.. ... ......++.++.+|++|.+
T Consensus 8 ~~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~--~~~----~~~~~~~~~~~~~Dl~d~~ 81 (362)
T 3sxp_A 8 LENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSL--GHF----KNLIGFKGEVIAADINNPL 81 (362)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCC--CCG----GGGTTCCSEEEECCTTCHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhh--hhh----hhccccCceEEECCCCCHH
Confidence 4678999999999999999999999 9999999999765211100000000 000 0011246899999999999
Q ss_pred cHHHH-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----CchhhhchhhH
Q 013273 156 QIEPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWG 230 (446)
Q Consensus 156 ~~~~a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----~~~~~~~~~~~ 230 (446)
+++++ +.++|+||||||.......++...+++|+.++.+++++|++.+++ |||+||.+++... .++....+.+.
T Consensus 82 ~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~-~V~~SS~~vyg~~~~~~~E~~~~~p~~~ 160 (362)
T 3sxp_A 82 DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAK-VIYASSAGVYGNTKAPNVVGKNESPENV 160 (362)
T ss_dssp HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCE-EEEEEEGGGGCSCCSSBCTTSCCCCSSH
T ss_pred HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCc-EEEeCcHHHhCCCCCCCCCCCCCCCCCh
Confidence 99999 889999999999766555667778899999999999999999985 9999997774322 23344567778
Q ss_pred HHHHHHHHHHHHHhCC--CCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHHHHHH
Q 013273 231 VLLWKRKAEEALIASG--LPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 231 Y~~sK~~~E~~l~~~g--l~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
|+.+|+.+|.+++... +++++|||+++|||+..... ...+.+.........++|++|+|++++
T Consensus 161 Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~ 240 (362)
T 3sxp_A 161 YGFSKLCMDEFVLSHSNDNVQVGLRYFNVYGPREFYKEKTASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANV 240 (362)
T ss_dssp HHHHHHHHHHHHHHTTTTSCEEEEEECSEESTTCGGGGGGSCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhccCCEEEEEeCceeCcCCCCCCcchhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHH
Confidence 9999999999999755 88999999999999753211 011111122233446899999999999
Q ss_pred HHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
.+++++. .+ +|||+++...++.++.+.+.+.++
T Consensus 241 ~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 241 KAMKAQK--SG-VYNVGYSQARSYNEIVSILKEHLG 273 (362)
T ss_dssp HHTTCSS--CE-EEEESCSCEEEHHHHHHHHHHHHC
T ss_pred HHHhcCC--CC-EEEeCCCCCccHHHHHHHHHHHcC
Confidence 9998774 34 999999999999999999999999
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.6e-31 Score=263.22 Aligned_cols=239 Identities=14% Similarity=0.088 Sum_probs=180.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
||+|||||||||||++|++.|+++|++|++++|+. .......+.+.. .++++++.+|++|.+++.
T Consensus 1 M~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~--------------~~~~~~~~~Dl~d~~~~~ 66 (347)
T 1orr_A 1 MAKLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLSS--------------LGNFEFVHGDIRNKNDVT 66 (347)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHHT--------------TCCCEEEECCTTCHHHHH
T ss_pred CcEEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhcc--------------CCceEEEEcCCCCHHHHH
Confidence 46899999999999999999999999999999853 222222222211 146899999999999999
Q ss_pred HHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccccCCC--------------
Q 013273 159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG-------------- 219 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~~~~~-------------- 219 (446)
+++.+ +|+||||||.... ...++...+++|+.++.+++++|++.+++ ||||+||.+++...
T Consensus 67 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~e~~~~~~~ 146 (347)
T 1orr_A 67 RLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTC 146 (347)
T ss_dssp HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEE
T ss_pred HHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEeccHHHhCCCCcCCcccccccccc
Confidence 99987 9999999996432 12345567889999999999999998885 99999998764321
Q ss_pred -------CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------cc-----c
Q 013273 220 -------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-----N 269 (446)
Q Consensus 220 -------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~~-----~ 269 (446)
.++.+..+...|+.+|+.+|.+++. .|+++++|||+++||++..... .. .
T Consensus 147 ~~~~~~~~e~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (347)
T 1orr_A 147 VDKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKP 226 (347)
T ss_dssp TTCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCC
T ss_pred cccccCccccCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEccCceeCcCCCCCCcCcHHHHHHHHHHhCcccCCCC
Confidence 1122344677899999999999874 4999999999999999642110 00 1
Q ss_pred eeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC--CCChhhHHHHHHhccCCCC
Q 013273 270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET--TAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 270 ~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~--~~t~~~i~e~l~~i~~~~~ 332 (446)
+.+...+.....++|++|+|++++.++.+.....+++||+.++. ..++.++.+++.+++|...
T Consensus 227 ~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g~~~ 291 (347)
T 1orr_A 227 FTISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDM 291 (347)
T ss_dssp EEEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCC
T ss_pred eEEecCCcceEeeEEHHHHHHHHHHHHhccccCCCCEEEeCCCCCCCccHHHHHHHHHHHhCCCC
Confidence 11111222334589999999999999986322457899999886 3799999999999998754
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=259.72 Aligned_cols=230 Identities=11% Similarity=0.077 Sum_probs=181.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||||||||||++|+++|+++|++|++++|+... . . -+++++.+|++|.+++
T Consensus 10 ~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~------------------~----l~~~~~~~Dl~d~~~~ 66 (321)
T 2pk3_A 10 HGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K------------------L----PNVEMISLDIMDSQRV 66 (321)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C------------------C----TTEEEEECCTTCHHHH
T ss_pred cCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c------------------c----ceeeEEECCCCCHHHH
Confidence 456899999999999999999999999999999998653 1 0 1588999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC-------Cchhhh
Q 013273 158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-------FPAAIL 225 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~-------~~~~~~ 225 (446)
.+++.+ +|+||||||.... ...++...+++|+.++.+++++|++. +++||||+||.+++... .++.+.
T Consensus 67 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~ 146 (321)
T 2pk3_A 67 KKVISDIKPDYIFHLAAKSSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL 146 (321)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC
T ss_pred HHHHHhcCCCEEEEcCcccchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC
Confidence 999975 9999999997542 23355667899999999999999876 68999999998764321 222344
Q ss_pred chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------c--cceeecccCcccCCccCH
Q 013273 226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------T--HNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~--~~~~~~~~~~~~~~~v~~ 285 (446)
.+...|+.+|+.+|.+++. .|+++++|||+++|||+..... . ..+...........++|+
T Consensus 147 ~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~v~v 226 (321)
T 2pk3_A 147 RPMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSLGFVTQDFAKQIVDIEMEKQEPIIKVGNLEAVRDFTDV 226 (321)
T ss_dssp BCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHHTTSSCSEEEESCSSCEEEEEEH
T ss_pred CCCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCCCchHHHHHHHHHHHhcCCCCCeEEeCCCCcEEeeEEH
Confidence 6677899999999999875 4999999999999999753210 0 011111122234468999
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+|+|++++.++.++. .+++||++++...++.++.+++.+++|...
T Consensus 227 ~Dva~a~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 271 (321)
T 2pk3_A 227 RDIVQAYWLLSQYGK--TGDVYNVCSGIGTRIQDVLDLLLAMANVKI 271 (321)
T ss_dssp HHHHHHHHHHHHHCC--TTCEEEESCSCEEEHHHHHHHHHHHSSSCC
T ss_pred HHHHHHHHHHHhCCC--CCCeEEeCCCCCeeHHHHHHHHHHHhCCCC
Confidence 999999999998763 478999999988999999999999998753
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=6.2e-31 Score=262.06 Aligned_cols=234 Identities=16% Similarity=0.056 Sum_probs=181.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
||+||||||+||||++|+++|+++ |++|++++|+... ...+ .. ....+++++.+|++|.+
T Consensus 4 m~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~----~~------------~~~~~~~~~~~Dl~d~~ 67 (348)
T 1oc2_A 4 FKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANL----EA------------ILGDRVELVVGDIADAE 67 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGT----GG------------GCSSSEEEEECCTTCHH
T ss_pred CcEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHH----hh------------hccCCeEEEECCCCCHH
Confidence 579999999999999999999998 8999999997531 1110 00 01157999999999999
Q ss_pred cHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC--------------
Q 013273 156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------------- 219 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-------------- 219 (446)
++.++++++|+||||||.... ...++...+++|+.++.+++++|.+.++ ||||+||.+++...
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~-~~v~~SS~~vyg~~~~~~~~~~~~~~~~ 146 (348)
T 1oc2_A 68 LVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPG 146 (348)
T ss_dssp HHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTT
T ss_pred HHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHhCC-eEEEecccceeCCCcccccccccccccC
Confidence 999999999999999996532 2245566789999999999999999888 99999998764211
Q ss_pred ---CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-----------ccceeecccCcccCC
Q 013273 220 ---FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGG 281 (446)
Q Consensus 220 ---~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~ 281 (446)
.++.+..+...|+.+|+.+|.+++. .|+++++|||+++||++..... ...+.+.........
T Consensus 147 ~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (348)
T 1oc2_A 147 EKFTAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRD 226 (348)
T ss_dssp SSBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEE
T ss_pred CCcCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEeeceeeCCCCCccchHHHHHHHHHcCCCceEecCCCceEe
Confidence 1122345667899999999998864 5999999999999999753110 001111112223446
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++|++|+|++++.+++++. .+++||++++...++.++.+++.+++|...
T Consensus 227 ~i~v~Dva~~~~~~~~~~~--~g~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 275 (348)
T 1oc2_A 227 WIHTNDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPK 275 (348)
T ss_dssp CEEHHHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCT
T ss_pred eEEHHHHHHHHHHHhhCCC--CCCeEEeCCCCCCCHHHHHHHHHHHhCCCc
Confidence 8999999999999998653 578999999988999999999999998764
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.3e-31 Score=259.26 Aligned_cols=234 Identities=17% Similarity=0.112 Sum_probs=180.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
||+|||||||||||++|+++|+++|++|++++|+...... .+ ..+++++.+|+.|.+++.+
T Consensus 1 M~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~------~~-------------~~~~~~~~~D~~~~~~~~~ 61 (330)
T 2c20_A 1 MNSILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHED------AI-------------TEGAKFYNGDLRDKAFLRD 61 (330)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGG------GS-------------CTTSEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCchh------hc-------------CCCcEEEECCCCCHHHHHH
Confidence 4689999999999999999999999999999997643211 00 1368999999999999999
Q ss_pred Hhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 160 ALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
++. ++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+...
T Consensus 62 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~~~~~~~~~E~~~~~~~~~ 141 (330)
T 2c20_A 62 VFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDEFKVDKFIFSSTAATYGEVDVDLITEETMTNPTNT 141 (330)
T ss_dssp HHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGGCSCSSSSBCTTSCCCCSSH
T ss_pred HHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHHcCCCEEEEeCCceeeCCCCCCCCCcCCCCCCCCh
Confidence 998 89999999996532 2234556788999999999999999999999999998774321 22334456778
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccc--c-----cc--------------cceeecc------cCccc
Q 013273 231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY--K-----ET--------------HNITLSQ------EDTLF 279 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~--~-----~~--------------~~~~~~~------~~~~~ 279 (446)
|+.+|+.+|.+++. .|+++++|||+++||++... . .. ..+.+.. .....
T Consensus 142 Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~ 221 (330)
T 2c20_A 142 YGETKLAIEKMLHWYSQASNLRYKIFRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCI 221 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCEEEEEECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCE
T ss_pred HHHHHHHHHHHHHHHHHHhCCcEEEEecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCcee
Confidence 99999999998874 59999999999999985210 0 00 0011110 11223
Q ss_pred CCccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 280 GGQVSNLQVAELLACMAKNRSL-SYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
..+||++|+|++++.+++++.. ..+++||++++...++.++.+++.+++|...
T Consensus 222 ~~~v~v~Dva~a~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 275 (330)
T 2c20_A 222 RDYIHVEDLVAAHFLGLKDLQNGGESDFYNLGNGNGFSVKEIVDAVREVTNHEI 275 (330)
T ss_dssp ECEEEHHHHHHHHHHHHHHHHTTCCCEEEECCCTTCBCHHHHHHHHHHHTTSCC
T ss_pred EeeEeHHHHHHHHHHHHhccccCCCCCeEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 3689999999999999986431 1368999999999999999999999998653
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.6e-30 Score=257.92 Aligned_cols=236 Identities=12% Similarity=0.036 Sum_probs=181.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+|+||||||+||||++|+++|+++| ++|++++|+.. ....+ . ......+++++.+|++|.+
T Consensus 3 ~m~vlVTGatG~iG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~----~-----------~~~~~~~~~~~~~Dl~d~~ 67 (336)
T 2hun_A 3 SMKLLVTGGMGFIGSNFIRYILEKHPDWEVINIDKLGYGSNPANL----K-----------DLEDDPRYTFVKGDVADYE 67 (336)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGG----T-----------TTTTCTTEEEEECCTTCHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHhCCCCEEEEEecCcccCchhHH----h-----------hhccCCceEEEEcCCCCHH
Confidence 4689999999999999999999996 99999999742 11111 0 0011257999999999999
Q ss_pred cHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCC-CEEEEEccccccCCC-----Cchhhhch
Q 013273 156 QIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v-~r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
++.+++.++|+||||||.... ...++...+++|+.++.+++++|.+.+. +||||+||.+++... .++.+..+
T Consensus 68 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~E~~~~~~ 147 (336)
T 2hun_A 68 LVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVSTDEVYGDILKGSFTENDRLMP 147 (336)
T ss_dssp HHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEEGGGGCCCSSSCBCTTBCCCC
T ss_pred HHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEeccHHHHCCCCCCCcCCCCCCCC
Confidence 999999999999999997532 2335566789999999999999998765 699999998763321 22234456
Q ss_pred hhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-----------ccceeecccCcccCCccCHHHHHHHH
Q 013273 228 FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
...|+.+|+.+|.+++. .|+++++|||+++||++..... ...+.+.........++|++|+|+++
T Consensus 148 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~ 227 (336)
T 2hun_A 148 SSPYSATKAASDMLVLGWTRTYNLNASITRCTNNYGPYQFPEKLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAI 227 (336)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHTTCEEEEEEECEEESTTCCTTSHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHH
T ss_pred CCccHHHHHHHHHHHHHHHHHhCCCEEEEeeeeeeCcCCCcCchHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHH
Confidence 77899999999998863 7999999999999999752110 01111111222344689999999999
Q ss_pred HHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 293 ACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 293 ~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+.++++.. .+++||++++...++.++.+.+.+++|...
T Consensus 228 ~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~~ 265 (336)
T 2hun_A 228 ELVLLKGE--SREIYNISAGEEKTNLEVVKIILRLMGKGE 265 (336)
T ss_dssp HHHHHHCC--TTCEEEECCSCEECHHHHHHHHHHHTTCCS
T ss_pred HHHHhCCC--CCCEEEeCCCCcccHHHHHHHHHHHhCCCc
Confidence 99998653 578999999988999999999999998753
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=5.4e-31 Score=261.47 Aligned_cols=232 Identities=15% Similarity=0.141 Sum_probs=181.9
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+.+|+||||||+||||++|+++|+++|++|++++|+......+. ....+++++.+|++|.+
T Consensus 16 ~~~~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-----------------~~l~~v~~~~~Dl~d~~ 78 (330)
T 2pzm_A 16 PRGSHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVL-----------------PPVAGLSVIEGSVTDAG 78 (330)
T ss_dssp STTTCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGS-----------------CSCTTEEEEECCTTCHH
T ss_pred ccCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhh-----------------hccCCceEEEeeCCCHH
Confidence 4566789999999999999999999999999999999754321100 01157899999999999
Q ss_pred cHHHHhc--CCCEEEEcccCCCC-ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC----chhhh-ch
Q 013273 156 QIEPALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----PAAIL-NL 227 (446)
Q Consensus 156 ~~~~a~~--~~D~VI~~Ag~~~~-~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~----~~~~~-~~ 227 (446)
++.+++. ++|+||||||.... ...++. +++|+.++.+++++|.+.+++||||+||.+++.... +.+.. .+
T Consensus 79 ~~~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~~~~~~~~~~~~E~~~~ 156 (330)
T 2pzm_A 79 LLERAFDSFKPTHVVHSAAAYKDPDDWAED--AATNVQGSINVAKAASKAGVKRLLNFQTALCYGRPATVPIPIDSPTAP 156 (330)
T ss_dssp HHHHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHHTCSEEEEEEEGGGGCSCSSSSBCTTCCCCC
T ss_pred HHHHHHhhcCCCEEEECCccCCCccccChh--HHHHHHHHHHHHHHHHHcCCCEEEEecCHHHhCCCccCCCCcCCCCCC
Confidence 9999998 99999999996543 222233 789999999999999999999999999987743211 00000 25
Q ss_pred hhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccccc---------ccceeecccCcccCCccCHHHHHH-HHHHHHh
Q 013273 228 FWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE---------THNITLSQEDTLFGGQVSNLQVAE-LLACMAK 297 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~---------~~~~~~~~~~~~~~~~v~~~DvA~-ai~~ll~ 297 (446)
...|+.+|+.+|.+++..++++++|||+++|||+..... ... .+..... ...++|++|+|+ +++.++.
T Consensus 157 ~~~Y~~sK~~~e~~~~~~~~~~~~iR~~~v~gp~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~i~~~Dva~~a~~~~~~ 234 (330)
T 2pzm_A 157 FTSYGISKTAGEAFLMMSDVPVVSLRLANVTGPRLAIGPIPTFYKRLKAGQ-KCFCSDT-VRDFLDMSDFLAIADLSLQE 234 (330)
T ss_dssp CSHHHHHHHHHHHHHHTCSSCEEEEEECEEECTTCCSSHHHHHHHHHHTTC-CCCEESC-EECEEEHHHHHHHHHHHTST
T ss_pred CChHHHHHHHHHHHHHHcCCCEEEEeeeeeECcCCCCCHHHHHHHHHHcCC-EEeCCCC-EecceeHHHHHHHHHHHHhh
Confidence 678999999999999988999999999999999741100 000 1111122 457899999999 9999998
Q ss_pred CCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 298 NRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 298 ~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
++. +++||+.++...++.++.+++.+++|..
T Consensus 235 ~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 265 (330)
T 2pzm_A 235 GRP---TGVFNVSTGEGHSIKEVFDVVLDYVGAT 265 (330)
T ss_dssp TCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred cCC---CCEEEeCCCCCCCHHHHHHHHHHHhCCC
Confidence 753 8999999998899999999999999876
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=246.09 Aligned_cols=215 Identities=15% Similarity=0.090 Sum_probs=173.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||| ||||++|+++|+++|++|++++|+..+...+.. .+++++.+|+.|.+
T Consensus 5 ~~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~---- 60 (286)
T 3ius_A 5 TGTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------------------SGAEPLLWPGEEPS---- 60 (286)
T ss_dssp CCEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------------------TTEEEEESSSSCCC----
T ss_pred cCcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------------------CCCeEEEecccccc----
Confidence 579999998 999999999999999999999999887665432 57999999999944
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh--CCCCEEEEEccccccCCC-----CchhhhchhhHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI--AKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVL 232 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~--~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~ 232 (446)
+.++|+|||+|+..... ...+.++++++++ .+++||||+||.+++... .++.+..+.+.|+
T Consensus 61 -~~~~d~vi~~a~~~~~~-----------~~~~~~l~~a~~~~~~~~~~~v~~Ss~~vyg~~~~~~~~E~~~~~p~~~Y~ 128 (286)
T 3ius_A 61 -LDGVTHLLISTAPDSGG-----------DPVLAALGDQIAARAAQFRWVGYLSTTAVYGDHDGAWVDETTPLTPTAARG 128 (286)
T ss_dssp -CTTCCEEEECCCCBTTB-----------CHHHHHHHHHHHHTGGGCSEEEEEEEGGGGCCCTTCEECTTSCCCCCSHHH
T ss_pred -cCCCCEEEECCCccccc-----------cHHHHHHHHHHHhhcCCceEEEEeecceecCCCCCCCcCCCCCCCCCCHHH
Confidence 78999999999864321 1236789999988 788999999998774322 2334456677899
Q ss_pred HHHHHHHHHHHhC-CCCEEEEecCCccCCCccccc----ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEE
Q 013273 233 LWKRKAEEALIAS-GLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 233 ~sK~~~E~~l~~~-gl~~tivRPg~v~gp~~~~~~----~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
.+|+.+|+++++. |++++++||+++||+++.... .....+... ....+++|++|+|++++.+++++. .+++|
T Consensus 129 ~sK~~~E~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~ 205 (286)
T 3ius_A 129 RWRVMAEQQWQAVPNLPLHVFRLAGIYGPGRGPFSKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD--PGAVY 205 (286)
T ss_dssp HHHHHHHHHHHHSTTCCEEEEEECEEEBTTBSSSTTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC--TTCEE
T ss_pred HHHHHHHHHHHhhcCCCEEEEeccceECCCchHHHHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC--CCCEE
Confidence 9999999999997 999999999999999754311 111112222 244578999999999999999876 57899
Q ss_pred EEecCCCCChhhHHHHHHhccCCCCC
Q 013273 308 EVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 308 ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
|++++...++.++.+.+.+.+|....
T Consensus 206 ~i~~~~~~s~~e~~~~i~~~~g~~~~ 231 (286)
T 3ius_A 206 NVCDDEPVPPQDVIAYAAELQGLPLP 231 (286)
T ss_dssp EECCSCCBCHHHHHHHHHHHHTCCCC
T ss_pred EEeCCCCccHHHHHHHHHHHcCCCCC
Confidence 99999999999999999999988644
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.97 E-value=8.8e-30 Score=238.04 Aligned_cols=203 Identities=13% Similarity=0.036 Sum_probs=158.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++|++|++++|+.++...+. ..+++++.+|++|.++ ++
T Consensus 1 MkilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------------------~~~~~~~~~D~~d~~~--~~ 59 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------------------GATVATLVKEPLVLTE--AD 59 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------------------CTTSEEEECCGGGCCH--HH
T ss_pred CEEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------------------CCCceEEecccccccH--hh
Confidence 57999999999999999999999999999999987655431 1579999999999887 88
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc--------hhhhchhhHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP--------AAILNLFWGVL 232 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~--------~~~~~~~~~Y~ 232 (446)
++++|+||||||.... .....+|+.++.+++++|++.+ +|||++||.++...... .....+...|+
T Consensus 60 ~~~~d~vi~~ag~~~~-----~~~~~~n~~~~~~l~~a~~~~~-~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~~~y~ 133 (224)
T 3h2s_A 60 LDSVDAVVDALSVPWG-----SGRGYLHLDFATHLVSLLRNSD-TLAVFILGSASLAMPGADHPMILDFPESAASQPWYD 133 (224)
T ss_dssp HTTCSEEEECCCCCTT-----SSCTHHHHHHHHHHHHTCTTCC-CEEEEECCGGGSBCTTCSSCGGGGCCGGGGGSTTHH
T ss_pred cccCCEEEECCccCCC-----cchhhHHHHHHHHHHHHHHHcC-CcEEEEecceeeccCCCCccccccCCCCCccchhhH
Confidence 8999999999997511 1235789999999999999999 89999999765322211 12233467799
Q ss_pred HHHHHHHHH--H-HhCCCCEEEEecCCccCCCcccccccceeeccc----CcccCCccCHHHHHHHHHHHHhCCCCCCCc
Q 013273 233 LWKRKAEEA--L-IASGLPYTIVRPGGMERPTDAYKETHNITLSQE----DTLFGGQVSNLQVAELLACMAKNRSLSYCK 305 (446)
Q Consensus 233 ~sK~~~E~~--l-~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~----~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~ 305 (446)
.+|..+|.+ + ++.|+++++||||++||++.... +..... ......+++++|+|++++.+++++. ..++
T Consensus 134 ~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~ 208 (224)
T 3h2s_A 134 GALYQYYEYQFLQMNANVNWIGISPSEAFPSGPATS----YVAGKDTLLVGEDGQSHITTGNMALAILDQLEHPT-AIRD 208 (224)
T ss_dssp HHHHHHHHHHHHTTCTTSCEEEEEECSBCCCCCCCC----EEEESSBCCCCTTSCCBCCHHHHHHHHHHHHHSCC-CTTS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEcCccccCCCcccC----ceecccccccCCCCCceEeHHHHHHHHHHHhcCcc-ccCC
Confidence 999999965 2 25799999999999999853221 111111 1122468999999999999999987 6799
Q ss_pred EEEEecCCCC
Q 013273 306 VVEVIAETTA 315 (446)
Q Consensus 306 v~ni~~~~~~ 315 (446)
+|++++....
T Consensus 209 ~~~~~~~~~~ 218 (224)
T 3h2s_A 209 RIVVRDADLE 218 (224)
T ss_dssp EEEEEECC--
T ss_pred EEEEecCcch
Confidence 9999998654
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-30 Score=248.78 Aligned_cols=215 Identities=18% Similarity=0.205 Sum_probs=176.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|||||||||||+++++.|+++ |++|++++|+..+...+.. .+++++.+|++|.+++.
T Consensus 1 ~~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~~-------------------~~~~~~~~D~~d~~~l~ 61 (287)
T 2jl1_A 1 FSIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLAD-------------------QGVEVRHGDYNQPESLQ 61 (287)
T ss_dssp CCEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHhh-------------------cCCeEEEeccCCHHHHH
Confidence 46999999999999999999999 9999999999876554321 46899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA 238 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (446)
++++++|+||||||... . .++|+.++.+++++|++.+++||||+||.++.. .+ ..|+.+|+.+
T Consensus 62 ~~~~~~d~vi~~a~~~~---~-----~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------~~-~~y~~~K~~~ 124 (287)
T 2jl1_A 62 KAFAGVSKLLFISGPHY---D-----NTLLIVQHANVVKAARDAGVKHIAYTGYAFAEE--------SI-IPLAHVHLAT 124 (287)
T ss_dssp HHTTTCSEEEECCCCCS---C-----HHHHHHHHHHHHHHHHHTTCSEEEEEEETTGGG--------CC-STHHHHHHHH
T ss_pred HHHhcCCEEEEcCCCCc---C-----chHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------CC-CchHHHHHHH
Confidence 99999999999998521 1 167999999999999999999999999987732 11 2699999999
Q ss_pred HHHHHhCCCCEEEEecCCccCCC-ccccc----ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 239 EEALIASGLPYTIVRPGGMERPT-DAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 239 E~~l~~~gl~~tivRPg~v~gp~-~~~~~----~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
|+++++.|++++++||++++++. ..+.. ....... .......++|++|+|++++.++.++. ..+++||++++.
T Consensus 125 E~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~ 202 (287)
T 2jl1_A 125 EYAIRTTNIPYTFLRNALYTDFFVNEGLRASTESGAIVTN-AGSGIVNSVTRNELALAAATVLTEEG-HENKTYNLVSNQ 202 (287)
T ss_dssp HHHHHHTTCCEEEEEECCBHHHHSSGGGHHHHHHTEEEES-CTTCCBCCBCHHHHHHHHHHHHTSSS-CTTEEEEECCSS
T ss_pred HHHHHHcCCCeEEEECCEeccccchhhHHHHhhCCceecc-CCCCccCccCHHHHHHHHHHHhcCCC-CCCcEEEecCCC
Confidence 99999999999999999998764 21110 1111111 12234478999999999999998865 468899999998
Q ss_pred CCChhhHHHHHHhccCCCCC
Q 013273 314 TAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 314 ~~t~~~i~e~l~~i~~~~~~ 333 (446)
..++.++.+++.+++|....
T Consensus 203 ~~s~~e~~~~i~~~~g~~~~ 222 (287)
T 2jl1_A 203 PWTFDELAQILSEVSGKKVV 222 (287)
T ss_dssp CBCHHHHHHHHHHHHSSCCE
T ss_pred cCCHHHHHHHHHHHHCCcce
Confidence 99999999999999987643
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=261.01 Aligned_cols=245 Identities=17% Similarity=0.053 Sum_probs=182.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEEcCchh---------HHHHHHHHHHhhhcccccccCCCCCCc---eEE
Q 013273 80 DNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR---------AENLVQSVKQMKLDGELANKGIQPVEM---LEL 146 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~-~~G~~V~~~~R~~~~---------~~~l~~~~~~~~l~~~~~~~g~~~~~~---v~~ 146 (446)
+|+||||||+||||++|++.|+ ++|++|++++|+... ...+.+.++.+ . +.....+ +++
T Consensus 2 ~m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~~~~~~~~~ 73 (397)
T 1gy8_A 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQS--D------GPKPPWADRYAAL 73 (397)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHS--C------SSCCTTTTCCCEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHh--h------ccccccCCceEEE
Confidence 3689999999999999999999 999999999997654 33333222221 0 1000124 899
Q ss_pred EEcCCCChhcHHHHhc--C-CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC--
Q 013273 147 VECDLEKRVQIEPALG--N-ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-- 219 (446)
Q Consensus 147 v~~Dl~d~~~~~~a~~--~-~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-- 219 (446)
+.+|++|.+++.+++. + +|+||||||.... ...++...+++|+.++.+++++|++.++++|||+||.+++...
T Consensus 74 ~~~Dl~d~~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~~~~~~iv~~SS~~v~g~~~~ 153 (397)
T 1gy8_A 74 EVGDVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTM 153 (397)
T ss_dssp EESCTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC
T ss_pred EECCCCCHHHHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHHhCCCEEEEECCHHHhCCCCc
Confidence 9999999999999987 6 9999999996542 2234556789999999999999999999999999998764321
Q ss_pred ----------CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccc------------cc-------
Q 013273 220 ----------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAY------------KE------- 266 (446)
Q Consensus 220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~------------~~------- 266 (446)
.++.+..+...|+.+|+.+|.+++. .|+++++|||+++||++... ..
T Consensus 154 ~~~~~~~~~~~E~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~ 233 (397)
T 1gy8_A 154 GSVSTNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVM 233 (397)
T ss_dssp -----CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHH
T ss_pred ccccccccCcCccCCCCCCCchHHHHHHHHHHHHHHHHHHCCcEEEEeccceeCCCccccccccccchhHHHHHHHHHHH
Confidence 1223345577899999999998874 59999999999999995310 00
Q ss_pred -----cc------------ceeecc------cCcccCCccCHHHHHHHHHHHHhCCCCCC----C---cEEEEecCCCCC
Q 013273 267 -----TH------------NITLSQ------EDTLFGGQVSNLQVAELLACMAKNRSLSY----C---KVVEVIAETTAP 316 (446)
Q Consensus 267 -----~~------------~~~~~~------~~~~~~~~v~~~DvA~ai~~ll~~~~~~~----~---~v~ni~~~~~~t 316 (446)
.. .+.+.. ......++||++|+|++++.+++++.... + ++|||+++...+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~l~~~~~~~~~~~~~~~~~~ni~~~~~~s 313 (397)
T 1gy8_A 234 SDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYS 313 (397)
T ss_dssp HHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEE
T ss_pred HHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHHHHHHhcccccccccccCCCcEEEeCCCCccc
Confidence 00 011100 11223368999999999999997643111 3 899999998899
Q ss_pred hhhHHHHHHhccCCCC
Q 013273 317 LTPMEELLAKIPSQRA 332 (446)
Q Consensus 317 ~~~i~e~l~~i~~~~~ 332 (446)
+.++.+++.+++|...
T Consensus 314 ~~e~~~~i~~~~g~~~ 329 (397)
T 1gy8_A 314 VREVIEVARKTTGHPI 329 (397)
T ss_dssp HHHHHHHHHHHHCCCC
T ss_pred HHHHHHHHHHHhCCCC
Confidence 9999999999998653
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.2e-30 Score=255.96 Aligned_cols=234 Identities=16% Similarity=0.065 Sum_probs=181.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC---C---CeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL---G---FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~---G---~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
|+|||||||||||++|+++|+++ | ++|++++|+... ...+ +.+ ....+++++.+|++
T Consensus 1 M~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~----~~~-----------~~~~~~~~~~~Dl~ 65 (337)
T 1r6d_A 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL----APV-----------DADPRLRFVHGDIR 65 (337)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG----GGG-----------TTCTTEEEEECCTT
T ss_pred CeEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhh----hhc-----------ccCCCeEEEEcCCC
Confidence 57999999999999999999997 8 999999996521 1111 000 01257999999999
Q ss_pred ChhcHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhh
Q 013273 153 KRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL 225 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~ 225 (446)
|.+++.+++.++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+.
T Consensus 66 d~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~ 145 (337)
T 1r6d_A 66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL 145 (337)
T ss_dssp CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred CHHHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEecchHHhCCCCCCCCCCCCCC
Confidence 999999999999999999996532 2235566789999999999999999999999999998764321 222344
Q ss_pred chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.+...|+.+|+.+|.+++. .|++++++||+++||++.... ....+.+.........++|++|+|+
T Consensus 146 ~~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~ 225 (337)
T 1r6d_A 146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225 (337)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHCCCEEEEEeeeeECCCCCCCChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHH
Confidence 5677899999999998863 699999999999999975210 0111111122223346899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+++.+++++. .+++||++++...++.++.+++.+++|..
T Consensus 226 a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 264 (337)
T 1r6d_A 226 GIALVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGAD 264 (337)
T ss_dssp HHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHhCCC--CCCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 9999998753 57899999999899999999999999875
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=4.9e-31 Score=264.13 Aligned_cols=240 Identities=14% Similarity=0.093 Sum_probs=183.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+|+|||||||||||++|+++|+++|++|++++|+..+...+.+.+. ...+++++.+|+.|.+++
T Consensus 7 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~--------------~~~~~~~~~~Dl~d~~~~ 72 (357)
T 1rkx_A 7 WQGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------------VADGMQSEIGDIRDQNKL 72 (357)
T ss_dssp HTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------------TTTTSEEEECCTTCHHHH
T ss_pred hCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhc--------------cCCceEEEEccccCHHHH
Confidence 456899999999999999999999999999999998765443322111 125789999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC------Cchhhhc
Q 013273 158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG------FPAAILN 226 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~------~~~~~~~ 226 (446)
.+++++ +|+||||||.... ...++...+++|+.++.+++++|++.+ ++||||+||.+++... .++....
T Consensus 73 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~vyg~~~~~~~~~E~~~~~ 152 (357)
T 1rkx_A 73 LESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMG 152 (357)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBC
T ss_pred HHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEecCHHHhCCCCcCCCCCCCCCCC
Confidence 999976 8999999985321 233455678899999999999999876 8899999998774321 1222445
Q ss_pred hhhHHHHHHHHHHHHHHhC-------------CCCEEEEecCCccCCCccc----c--------cccceeecccCcccCC
Q 013273 227 LFWGVLLWKRKAEEALIAS-------------GLPYTIVRPGGMERPTDAY----K--------ETHNITLSQEDTLFGG 281 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~~-------------gl~~tivRPg~v~gp~~~~----~--------~~~~~~~~~~~~~~~~ 281 (446)
+...|+.+|+.+|.+++.. |+++++|||+++|||++.. . ....+.+. .......
T Consensus 153 ~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~gi~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~ 231 (357)
T 1rkx_A 153 GYDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIR-NPHAIRP 231 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECS-CTTCEEC
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhhhhccccCCceEEEEeeceeeCCCCCccccHHHHHHHHHhcCCCEEEC-CCCCeec
Confidence 6778999999999988642 9999999999999997521 0 01111121 1223446
Q ss_pred ccCHHHHHHHHHHHHhC---CCCCCCcEEEEecC--CCCChhhHHHHHHhccCCCC
Q 013273 282 QVSNLQVAELLACMAKN---RSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~---~~~~~~~v~ni~~~--~~~t~~~i~e~l~~i~~~~~ 332 (446)
++|++|+|++++.++.+ .....+++||++++ ...++.++.+++.+++|...
T Consensus 232 ~v~v~Dva~a~~~~~~~~~~~~~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g~~~ 287 (357)
T 1rkx_A 232 WQHVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGA 287 (357)
T ss_dssp CEETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTC
T ss_pred cEeHHHHHHHHHHHHHhhhhcCCCCCceEEECCCCCCcccHHHHHHHHHHHhCCCC
Confidence 89999999999999874 21135789999974 57899999999999998754
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=7.7e-31 Score=257.76 Aligned_cols=229 Identities=17% Similarity=0.101 Sum_probs=178.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+||||++|+++|+++|++|++++|....... . -..+++++.+|++|.+++.++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~------~-------------~~~~~~~~~~Dl~~~~~~~~~ 61 (311)
T 2p5y_A 1 MRVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRE------N-------------VPKGVPFFRVDLRDKEGVERA 61 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGG------G-------------SCTTCCEECCCTTCHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchh------h-------------cccCeEEEECCCCCHHHHHHH
Confidence 579999999999999999999999999999985432110 0 014678899999999999999
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc-cccCC------CCchhhhchhh
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL-GTNKF------GFPAAILNLFW 229 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~-~~~~~------~~~~~~~~~~~ 229 (446)
++ ++|+||||||.... ...++...+++|+.++.+++++|++.+++|||++||. .++.. ..++.+..+..
T Consensus 62 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~~g~~~~~~~~~E~~~~~~~~ 141 (311)
T 2p5y_A 62 FREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQYGVEKLVFASTGGAIYGEVPEGERAEETWPPRPKS 141 (311)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEHHHHHCCCCTTCCBCTTSCCCCCS
T ss_pred HHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCChhhcCCCCCCCCcCCCCCCCCCC
Confidence 97 89999999986432 2234556788999999999999999999999999998 44321 12223345667
Q ss_pred HHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc--------------ccceeec-----ccCcccCCccCHH
Q 013273 230 GVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE--------------THNITLS-----QEDTLFGGQVSNL 286 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~--------------~~~~~~~-----~~~~~~~~~v~~~ 286 (446)
.|+.+|+.+|.+++ +.|+++++|||+++|||+..... ...+.+. ........++|++
T Consensus 142 ~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~ 221 (311)
T 2p5y_A 142 PYAASKAAFEHYLSVYGQSYGLKWVSLRYGNVYGPRQDPHGEAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVG 221 (311)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCSSSTTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHH
T ss_pred hHHHHHHHHHHHHHHHHHHcCCCEEEEeeccccCcCCCCCCcCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHH
Confidence 89999999999886 36999999999999999643210 0111111 2223344789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
|+|++++.+++++ +++||++++...++.++.+++.+++|...
T Consensus 222 Dva~a~~~~~~~~----~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 263 (311)
T 2p5y_A 222 DVAEAHALALFSL----EGIYNVGTGEGHTTREVLMAVAEAAGKAP 263 (311)
T ss_dssp HHHHHHHHHHHHC----CEEEEESCSCCEEHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhCC----CCEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 9999999999864 78999999999999999999999998754
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-30 Score=263.72 Aligned_cols=236 Identities=14% Similarity=0.100 Sum_probs=181.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+|+|||||||||||++|++.|+++| ++|++++|+....... + ....+++++.+|+.|.++
T Consensus 30 ~~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~--------l---------~~~~~v~~~~~Dl~d~~~ 92 (377)
T 2q1s_A 30 LANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKIN--------V---------PDHPAVRFSETSITDDAL 92 (377)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGG--------S---------CCCTTEEEECSCTTCHHH
T ss_pred hCCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhh--------c---------cCCCceEEEECCCCCHHH
Confidence 456899999999999999999999999 9999999986532110 0 012679999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCC-----C--chh---
Q 013273 157 IEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFG-----F--PAA--- 223 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~-----~--~~~--- 223 (446)
+.++++++|+||||||..... ..++...+++|+.++.+++++|++. +++||||+||.+++... . ++.
T Consensus 93 l~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~ 172 (377)
T 2q1s_A 93 LASLQDEYDYVFHLATYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV 172 (377)
T ss_dssp HHHCCSCCSEEEECCCCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCC
T ss_pred HHHHhhCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc
Confidence 999999999999999965321 2345567889999999999999998 89999999998764321 1 222
Q ss_pred hh-chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCc---------cc----cc-----------ccceeecc
Q 013273 224 IL-NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTD---------AY----KE-----------THNITLSQ 274 (446)
Q Consensus 224 ~~-~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~---------~~----~~-----------~~~~~~~~ 274 (446)
+. .+...|+.+|+.+|.+++. .|+++++|||+++||++. .. .. ...+.+..
T Consensus 173 ~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 252 (377)
T 2q1s_A 173 SLHNNDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYKALKGMPLPLEN 252 (377)
T ss_dssp CSSCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHHHHTTCCCCCSG
T ss_pred cccCCCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHHHHcCCCeEEeC
Confidence 23 5667899999999998874 599999999999999975 21 00 00011111
Q ss_pred cCcccCCccCHHHHHHH-HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 275 EDTLFGGQVSNLQVAEL-LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~a-i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.......++|++|+|++ ++.+++++. .+ +|||+++...++.++.+++.+++|....
T Consensus 253 ~g~~~~~~i~v~Dva~a~i~~~~~~~~--~g-~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 309 (377)
T 2q1s_A 253 GGVATRDFIFVEDVANGLIACAADGTP--GG-VYNIASGKETSIADLATKINEITGNNTE 309 (377)
T ss_dssp GGCCEECCEEHHHHHHHHHHHHHHCCT--TE-EEECCCCCCEEHHHHHHHHHHHHTCCSC
T ss_pred CCCeEEeeEEHHHHHHHHHHHHHhcCC--CC-eEEecCCCceeHHHHHHHHHHHhCCCCC
Confidence 12234468999999999 999998864 35 9999999999999999999999987643
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-31 Score=257.72 Aligned_cols=226 Identities=14% Similarity=0.078 Sum_probs=174.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|+|||||||||||++|+++|+++|+ +... ....++++.+|++|.+.+
T Consensus 4 ~~~~~vlVtGatG~iG~~l~~~L~~~g~------~~~~------------------------~~~~~~~~~~D~~d~~~~ 53 (319)
T 4b8w_A 4 FQSMRILVTGGSGLVGKAIQKVVADGAG------LPGE------------------------DWVFVSSKDADLTDTAQT 53 (319)
T ss_dssp CCCCEEEEETCSSHHHHHHHHHHHTTTC------CTTC------------------------EEEECCTTTCCTTSHHHH
T ss_pred ccCCeEEEECCCcHHHHHHHHHHHhcCC------cccc------------------------cccccCceecccCCHHHH
Confidence 5678999999999999999999999998 1110 013455567999999999
Q ss_pred HHHhcC--CCEEEEcccCCC---CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchh----
Q 013273 158 EPALGN--ASVVICCIGASE---KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAA---- 223 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~---~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~---- 223 (446)
.+++++ +|+|||||+... ....++...+++|+.++.+++++|++.+++||||+||.+++... .++.
T Consensus 54 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~ 133 (319)
T 4b8w_A 54 RALFEKVQPTHVIHLAAMVGGLFRNIKYNLDFWRKNVHMNDNVLHSAFEVGARKVVSCLSTCIFPDKTTYPIDETMIHNG 133 (319)
T ss_dssp HHHHHHSCCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGSCSSCCSSBCGGGGGBS
T ss_pred HHHHhhcCCCEEEECceecccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEEcchhhcCCCCCCCccccccccC
Confidence 999976 999999999753 22344556689999999999999999999999999998774321 1111
Q ss_pred hhchhh-HHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc-------------------cccceeecccCccc
Q 013273 224 ILNLFW-GVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLF 279 (446)
Q Consensus 224 ~~~~~~-~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-------------------~~~~~~~~~~~~~~ 279 (446)
...+.. .|+.+|+.+|++++. .|++++++||+++|||+.... ....+.+.......
T Consensus 134 ~~~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 213 (319)
T 4b8w_A 134 PPHNSNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIEDGHVLPGLIHKVHLAKSSGSALTVWGTGNPR 213 (319)
T ss_dssp CCCSSSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTTSCHHHHHHHHHHHHHHHTCCEEEESCSCCE
T ss_pred CCCCCcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCccccccHHHHHHHHHHhccCCceEEeCCCCee
Confidence 223333 699999999998864 799999999999999976421 01112222233344
Q ss_pred CCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 280 GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
..++|++|+|++++.++.++....+++||++++...++.++.+++.+.+|....
T Consensus 214 ~~~i~v~Dva~a~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 267 (319)
T 4b8w_A 214 RQFIYSLDLAQLFIWVLREYNEVEPIILSVGEEDEVSIKEAAEAVVEAMDFHGE 267 (319)
T ss_dssp ECEEEHHHHHHHHHHHHHHCCCSSCEEECCCGGGCEEHHHHHHHHHHHTTCCSC
T ss_pred EEEEeHHHHHHHHHHHHhccccCCceEEEecCCCceeHHHHHHHHHHHhCCCCc
Confidence 578999999999999999855356789999999999999999999999987654
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=3.9e-30 Score=256.27 Aligned_cols=241 Identities=16% Similarity=0.127 Sum_probs=180.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh------HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR------AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+|+|||||||||||++|+++|+++|++|++++|+... .....+.+... . + .+++++.+|++|
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~--~------~----~~~~~~~~D~~~ 69 (348)
T 1ek6_A 2 AEKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL--T------G----RSVEFEEMDILD 69 (348)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH--H------T----CCCEEEECCTTC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhc--c------C----CceEEEECCCCC
Confidence 4789999999999999999999999999999986432 11111222211 0 1 478999999999
Q ss_pred hhcHHHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh
Q 013273 154 RVQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI 224 (446)
Q Consensus 154 ~~~~~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~ 224 (446)
.+++.++++ ++|+||||||.... ...++...+++|+.++.+++++|++.++++|||+||.+++... .++.+
T Consensus 70 ~~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~E~~~ 149 (348)
T 1ek6_A 70 QGALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHP 149 (348)
T ss_dssp HHHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSC
T ss_pred HHHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCCCCCcCCCCC
Confidence 999999998 89999999996532 2234556788999999999999999999999999998774321 12223
Q ss_pred hch-hhHHHHHHHHHHHHHHh---CC--CCEEEEecCCccCCCcc--cc--------------------cccceeecc--
Q 013273 225 LNL-FWGVLLWKRKAEEALIA---SG--LPYTIVRPGGMERPTDA--YK--------------------ETHNITLSQ-- 274 (446)
Q Consensus 225 ~~~-~~~Y~~sK~~~E~~l~~---~g--l~~tivRPg~v~gp~~~--~~--------------------~~~~~~~~~-- 274 (446)
..+ ...|+.+|+.+|.+++. .+ ++++++||+++||++.. +. ....+.+..
T Consensus 150 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 229 (348)
T 1ek6_A 150 TGGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGND 229 (348)
T ss_dssp CCCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSC
T ss_pred CCCCCCchHHHHHHHHHHHHHHHhcCCCcceEEEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCc
Confidence 344 67899999999998864 24 99999999999998420 00 000011110
Q ss_pred ----cCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 275 ----EDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 275 ----~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
.......+||++|+|++++.+++++. ...+++||++++...++.++.+++.+++|...
T Consensus 230 ~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~g~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 292 (348)
T 1ek6_A 230 YDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKI 292 (348)
T ss_dssp SSSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCC
T ss_pred ccCCCCceEEeeEEHHHHHHHHHHHHhcccccCCceEEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 11233468999999999999998652 12248999999998999999999999998753
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=255.67 Aligned_cols=238 Identities=13% Similarity=-0.016 Sum_probs=181.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+|+|||||||||||++|++.|+++|++|++++|+..+... ..++.+ ....+++++.+|+.|.+++
T Consensus 12 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~--~~~~~~-----------~~~~~~~~~~~Dl~d~~~~ 78 (335)
T 1rpn_A 12 SMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLREL-----------GIEGDIQYEDGDMADACSV 78 (335)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHT-----------TCGGGEEEEECCTTCHHHH
T ss_pred ccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccc--cchhhc-----------cccCceEEEECCCCCHHHH
Confidence 346799999999999999999999999999999998754210 001110 0115789999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCC-CEEEEEccccccCCC-----Cchhhhch
Q 013273 158 EPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v-~r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
.+++.+ +|+||||||..... ..++...+++|+.++.+++++|++.++ ++|||+||.+++... .++.+..+
T Consensus 79 ~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~SS~~v~g~~~~~~~~E~~~~~p 158 (335)
T 1rpn_A 79 QRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYP 158 (335)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred HHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeCHHHhCCCCCCCCCcccCCCC
Confidence 999975 69999999965321 344556788999999999999999886 899999998774321 23334456
Q ss_pred hhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------cc-ceeecccCcccCCccCHHHH
Q 013273 228 FWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~~-~~~~~~~~~~~~~~v~~~Dv 288 (446)
.+.|+.+|+.+|.+++. .|++++++||+++|||+..... .. .............++|++|+
T Consensus 159 ~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dv 238 (335)
T 1rpn_A 159 RSPYGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDY 238 (335)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCcEEEEeeCcccCCCCCCCcchHHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHH
Confidence 77899999999998874 5999999999999999642110 00 01111112233468999999
Q ss_pred HHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 289 AELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 289 A~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
|++++.+++++. +++||++++...++.++.+++.+++|..
T Consensus 239 a~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 278 (335)
T 1rpn_A 239 VEAMWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLD 278 (335)
T ss_dssp HHHHHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCC
T ss_pred HHHHHHHHhcCC---CCEEEEeCCCCccHHHHHHHHHHHhCCC
Confidence 999999999875 4899999999899999999999999874
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.97 E-value=9.8e-31 Score=256.50 Aligned_cols=229 Identities=12% Similarity=0.011 Sum_probs=177.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+|+|||||||||||++|+++|+++ |++|++++|+..... +. .+++++.+|+.|.+++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~-~~--------------------~~~~~~~~D~~d~~~~ 60 (312)
T 2yy7_A 2 NPKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTD-VV--------------------NSGPFEVVNALDFNQI 60 (312)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCH-HH--------------------HSSCEEECCTTCHHHH
T ss_pred CceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCcccc-cc--------------------CCCceEEecCCCHHHH
Confidence 468999999999999999999999 899999999876522 10 3477899999999999
Q ss_pred HHHhc--CCCEEEEcccCCCC-ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------Cchhhhchh
Q 013273 158 EPALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLF 228 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~-~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~~~ 228 (446)
.+++. ++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++.+..+.
T Consensus 61 ~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~~~ 140 (312)
T 2yy7_A 61 EHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKAKKIKKIFWPSSIAVFGPTTPKENTPQYTIMEPS 140 (312)
T ss_dssp HHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHTTSCSEEECCEEGGGCCTTSCSSSBCSSCBCCCC
T ss_pred HHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHHcCCCEEEEeccHHHhCCCCCCCCccccCcCCCC
Confidence 99998 89999999986432 1234556688999999999999999999999999998774321 122334567
Q ss_pred hHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHH
Q 013273 229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
..|+.+|+.+|.+++. .|+++++|||+++||+...... ...............++|++|+|
T Consensus 141 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva 220 (312)
T 2yy7_A 141 TVYGISKQAGERWCEYYHNIYGVDVRSIRYPGLISWSTPPGGGTTDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAI 220 (312)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCEEECEEECEEECSSSCCCSCTTTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHhcCCcEEEEeCCeEecCCCCCCCchhhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHH
Confidence 7899999999998863 5999999999999996421110 11111111223344689999999
Q ss_pred HHHHHHHhCCCCC--CCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 290 ELLACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 290 ~ai~~ll~~~~~~--~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
++++.+++++... .+++||+++ ...++.++.+++.++++.
T Consensus 221 ~a~~~~~~~~~~~~~~~~~~ni~~-~~~s~~e~~~~i~~~~~~ 262 (312)
T 2yy7_A 221 DATINIMKAPVEKIKIHSSYNLAA-MSFTPTEIANEIKKHIPE 262 (312)
T ss_dssp HHHHHHHHSCGGGCCCSSCEECCS-EEECHHHHHHHHHTTCTT
T ss_pred HHHHHHHhCcccccccCceEEeCC-CccCHHHHHHHHHHHCCC
Confidence 9999999986521 248999987 678999999999999873
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.97 E-value=3.1e-30 Score=256.30 Aligned_cols=234 Identities=15% Similarity=0.131 Sum_probs=179.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-hcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~~~~ 158 (446)
|+|||||||||||++|+++|+++ |++|++++|+..+...+. ...+++++.+|+.|. +.++
T Consensus 1 m~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~~~~ 62 (345)
T 2bll_A 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFL------------------NHPHFHFVEGDISIHSEWIE 62 (345)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGT------------------TCTTEEEEECCTTTCSHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhh------------------cCCCeEEEeccccCcHHHHH
Confidence 58999999999999999999998 899999999876543210 125799999999984 5688
Q ss_pred HHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh-------
Q 013273 159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI------- 224 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~------- 224 (446)
++++++|+||||||.... ...++...+++|+.++.+++++|++.+ +||||+||.+++... .++..
T Consensus 63 ~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~-~~~v~~SS~~v~g~~~~~~~~e~~~~~~~~~~ 141 (345)
T 2bll_A 63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV 141 (345)
T ss_dssp HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred hhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEecHHHcCCCCCCCcCCcccccccCcc
Confidence 889999999999986532 123445567899999999999999988 899999998774321 11111
Q ss_pred hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-------------------cccceeecccCcccCC
Q 013273 225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTLFGG 281 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-------------------~~~~~~~~~~~~~~~~ 281 (446)
..+.+.|+.+|..+|.+++ +.|+++++|||+++||++.... ....+.+.........
T Consensus 142 ~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 221 (345)
T 2bll_A 142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 221 (345)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred cCcccccHHHHHHHHHHHHHHHHhcCCCEEEEcCCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEE
Confidence 1355689999999999886 3699999999999999974310 0011111112223346
Q ss_pred ccCHHHHHHHHHHHHhCCCC-CCCcEEEEecCC-CCChhhHHHHHHhccCCCCC
Q 013273 282 QVSNLQVAELLACMAKNRSL-SYCKVVEVIAET-TAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~~~~-~~t~~~i~e~l~~i~~~~~~ 333 (446)
++|++|+|++++.+++++.. ..+++||++++. ..++.++.+++.+++|....
T Consensus 222 ~i~v~Dva~a~~~~~~~~~~~~~g~~~~i~~~~~~~s~~e~~~~i~~~~g~~~~ 275 (345)
T 2bll_A 222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPL 275 (345)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTT
T ss_pred EEEHHHHHHHHHHHHhhccccCCCceEEeCCCCCCCCHHHHHHHHHHHhCCCcc
Confidence 89999999999999987531 357899999986 78999999999999987643
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.97 E-value=1.8e-29 Score=250.17 Aligned_cols=239 Identities=18% Similarity=0.103 Sum_probs=180.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEE-EcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~~ 156 (446)
..+|+||||||+||||++|++.|+++|++|++++|+.++...+.+.+... .+ .+++++ .+|++|.++
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~--------~~----~~~~~~~~~D~~d~~~ 76 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK--------YP----GRFETAVVEDMLKQGA 76 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------ST----TTEEEEECSCTTSTTT
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhcc--------CC----CceEEEEecCCcChHH
Confidence 56689999999999999999999999999999999987766554443321 01 468888 799999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh-CCCCEEEEEccccccCCCC---------chh---
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSSLGTNKFGF---------PAA--- 223 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~-~~v~r~V~vSS~~~~~~~~---------~~~--- 223 (446)
+.++++++|+||||||..... .++...+++|+.++.+++++|++ .+++||||+||.+++.... +++
T Consensus 77 ~~~~~~~~d~vih~A~~~~~~-~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~~~~~E~~~~~ 155 (342)
T 1y1p_A 77 YDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL 155 (342)
T ss_dssp TTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred HHHHHcCCCEEEEeCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHHHhcCCCCCCCCcccCccccCc
Confidence 999999999999999975432 34556788999999999999985 6789999999987642111 111
Q ss_pred -------------hhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccccc-c-------eeecc--
Q 013273 224 -------------ILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETH-N-------ITLSQ-- 274 (446)
Q Consensus 224 -------------~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~-~-------~~~~~-- 274 (446)
+..+.+.|+.+|+.+|.+++. .+++++++||+++||+........ . +..+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~rp~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (342)
T 1y1p_A 156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS 235 (342)
T ss_dssp HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC
T ss_pred hhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCceEEEEcCCceECCCCCCCCCCccHHHHHHHHHcCCCc
Confidence 134667899999999998863 278999999999999964321100 0 00000
Q ss_pred ---cCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 275 ---EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 275 ---~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
.......++|++|+|++++.++.++. ..++.+ ++.+...++.++.+++.++++..
T Consensus 236 ~~~~~~~~~~~v~v~Dva~a~~~~~~~~~-~~g~~~-~~~g~~~s~~e~~~~i~~~~~~~ 293 (342)
T 1y1p_A 236 PALALMPPQYYVSAVDIGLLHLGCLVLPQ-IERRRV-YGTAGTFDWNTVLATFRKLYPSK 293 (342)
T ss_dssp HHHHTCCSEEEEEHHHHHHHHHHHHHCTT-CCSCEE-EECCEEECHHHHHHHHHHHCTTS
T ss_pred cccccCCcCCEeEHHHHHHHHHHHHcCcc-cCCceE-EEeCCCCCHHHHHHHHHHHCCCc
Confidence 01123468999999999999998764 334444 44556689999999999999864
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1e-29 Score=258.41 Aligned_cols=242 Identities=14% Similarity=0.063 Sum_probs=175.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH-------------HHHHHHHh-hhcccccccCCCCCCc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN-------------LVQSVKQM-KLDGELANKGIQPVEM 143 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~-------------l~~~~~~~-~l~~~~~~~g~~~~~~ 143 (446)
..+++|||||||||||++|+++|+++|++|++++|....... +.+.+... .+. ..+
T Consensus 9 ~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~----------~~~ 78 (404)
T 1i24_A 9 HHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALT----------GKS 78 (404)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHH----------CCC
T ss_pred cCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhcc----------CCc
Confidence 467899999999999999999999999999999987543211 00111110 000 157
Q ss_pred eEEEEcCCCChhcHHHHhcC--CCEEEEcccCCCCc--cCCC---CCcccchHHHHHHHHHHHHhCCC-CEEEEEccccc
Q 013273 144 LELVECDLEKRVQIEPALGN--ASVVICCIGASEKE--VFDI---TGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGT 215 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~~~--~D~VI~~Ag~~~~~--~~~~---~~~~~vNv~g~~~l~~aa~~~~v-~r~V~vSS~~~ 215 (446)
++++.+|++|.+++.+++.+ +|+||||||..... ..++ ...+++|+.|+.+++++|++.++ +||||+||.++
T Consensus 79 v~~~~~Dl~d~~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~~~V~~SS~~v 158 (404)
T 1i24_A 79 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 158 (404)
T ss_dssp CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred eEEEECCCCCHHHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHhCCCcEEEEeCcHHH
Confidence 89999999999999999987 99999999965321 1111 23568999999999999999887 59999999877
Q ss_pred cCCCC----ch--------------hhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc--------
Q 013273 216 NKFGF----PA--------------AILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-------- 265 (446)
Q Consensus 216 ~~~~~----~~--------------~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-------- 265 (446)
+.... ++ ....+.+.|+.+|+.+|.+++. .|+++++|||++||||++...
T Consensus 159 yg~~~~~~~E~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ivrp~~v~Gp~~~~~~~~~~~~~ 238 (404)
T 1i24_A 159 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN 238 (404)
T ss_dssp GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred hCCCCCCCCccccccccccccccccCCCCCCChhHHHHHHHHHHHHHHHHhcCCeEEEEecceeeCCCCCcccccccccc
Confidence 43211 10 1334567899999999998764 499999999999999975210
Q ss_pred --------------------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCC--cEEEEecCCCCChhhHHHH
Q 013273 266 --------------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYC--KVVEVIAETTAPLTPMEEL 323 (446)
Q Consensus 266 --------------------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~--~v~ni~~~~~~t~~~i~e~ 323 (446)
....+.+...+....+++|++|+|++++.+++++. ..+ ++||+++ ...++.++.++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~-~~g~~~~yni~~-~~~s~~e~~~~ 316 (404)
T 1i24_A 239 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGEFRVFNQFT-EQFSVNELASL 316 (404)
T ss_dssp CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTCEEEEEECS-EEEEHHHHHHH
T ss_pred ccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc-cCCCceEEEECC-CCCcHHHHHHH
Confidence 00011111222234468999999999999998765 334 7999998 77899999999
Q ss_pred HHhc---cCCC
Q 013273 324 LAKI---PSQR 331 (446)
Q Consensus 324 l~~i---~~~~ 331 (446)
+.++ +|..
T Consensus 317 i~~~~~~~g~~ 327 (404)
T 1i24_A 317 VTKAGSKLGLD 327 (404)
T ss_dssp HHHHHHTTTCC
T ss_pred HHHHHHhhCCC
Confidence 9998 5554
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.97 E-value=2.9e-30 Score=250.55 Aligned_cols=213 Identities=12% Similarity=0.097 Sum_probs=175.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|++.|+++|++|++++|.. +|+.|.+.+.++
T Consensus 6 m~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------------~D~~d~~~~~~~ 51 (287)
T 3sc6_A 6 ERVIITGANGQLGKQLQEELNPEEYDIYPFDKKL----------------------------------LDITNISQVQQV 51 (287)
T ss_dssp EEEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT----------------------------------SCTTCHHHHHHH
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCEEEEecccc----------------------------------cCCCCHHHHHHH
Confidence 4899999999999999999999999999999931 899999999999
Q ss_pred hc--CCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
+. ++|+||||||..... ..++...+++|+.++.+++++|++.++ ||||+||..++... .++++..+.+.|
T Consensus 52 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 130 (287)
T 3sc6_A 52 VQEIRPHIIIHCAAYTKVDQAEKERDLAYVINAIGARNVAVASQLVGA-KLVYISTDYVFQGDRPEGYDEFHNPAPINIY 130 (287)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCCCCSSCBCTTSCCCCCSHH
T ss_pred HHhcCCCEEEECCcccChHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchhhhcCCCCCCCCCCCCCCCCCCHH
Confidence 97 799999999975432 245566789999999999999999988 89999998774321 233445677889
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcccc---------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS 302 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~ 302 (446)
+.+|+.+|++++..+.+++++||+++||+++... ....+.+. ......++|++|+|++++.+++++.
T Consensus 131 ~~sK~~~E~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~-- 206 (287)
T 3sc6_A 131 GASKYAGEQFVKELHNKYFIVRTSWLYGKYGNNFVKTMIRLGKEREEISVV--ADQIGSPTYVADLNVMINKLIHTSL-- 206 (287)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHTTCSEEEEE--CSCEECCEEHHHHHHHHHHHHTSCC--
T ss_pred HHHHHHHHHHHHHhCCCcEEEeeeeecCCCCCcHHHHHHHHHHcCCCeEee--cCcccCceEHHHHHHHHHHHHhCCC--
Confidence 9999999999999888999999999999864321 01111111 1244578999999999999999876
Q ss_pred CCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 303 YCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 303 ~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+++||++++...++.++.+.+.+.+|....
T Consensus 207 -~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 236 (287)
T 3sc6_A 207 -YGTYHVSNTGSCSWFEFAKKIFSYANMKVN 236 (287)
T ss_dssp -CEEEECCCBSCEEHHHHHHHHHHHHTCCCE
T ss_pred -CCeEEEcCCCcccHHHHHHHHHHHcCCCcc
Confidence 789999999999999999999999987643
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.97 E-value=5.2e-30 Score=252.07 Aligned_cols=224 Identities=14% Similarity=0.077 Sum_probs=154.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|+++|+++|++|++++|+... ++ ++.+|++|.+++.+
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~-------------------------~~--~~~~Dl~d~~~~~~ 54 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR-------------------------PK--FEQVNLLDSNAVHH 54 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC---------------------------------------------CHH
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC-------------------------CC--eEEecCCCHHHHHH
Confidence 4789999999999999999999999999999987532 12 67799999999999
Q ss_pred HhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----CchhhhchhhHH
Q 013273 160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGV 231 (446)
Q Consensus 160 a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----~~~~~~~~~~~Y 231 (446)
++.+ +|+||||||.... ...++...+++|+.++.+++++|++.++ ||||+||.+++... .++.+..+...|
T Consensus 55 ~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~~~~~~~~~E~~~~~~~~~Y 133 (315)
T 2ydy_A 55 IIHDFQPHVIVHCAAERRPDVVENQPDAASQLNVDASGNLAKEAAAVGA-FLIYISSDYVFDGTNPPYREEDIPAPLNLY 133 (315)
T ss_dssp HHHHHCCSEEEECC-------------------CHHHHHHHHHHHHHTC-EEEEEEEGGGSCSSSCSBCTTSCCCCCSHH
T ss_pred HHHhhCCCEEEECCcccChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEchHHHcCCCCCCCCCCCCCCCcCHH
Confidence 9875 8999999996432 2456677889999999999999999887 99999998774321 223334567789
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCccc----cc---------ccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAY----KE---------THNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~----~~---------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
+.+|+.+|.+++..++++++|||++|||+.+.. .. ...+.+ .......++|++|+|++++.++.+
T Consensus 134 ~~sK~~~e~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~i~v~Dva~a~~~~~~~ 211 (315)
T 2ydy_A 134 GKTKLDGEKAVLENNLGAAVLRIPILYGEVEKLEESAVTVMFDKVQFSNKSANM--DHWQQRFPTHVKDVATVCRQLAEK 211 (315)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEECSEECSCSSGGGSTTGGGHHHHHCCSSCEEE--ECSSBBCCEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCcccccHHHHHHHHHHhcCCCeee--ccCceECcEEHHHHHHHHHHHHHh
Confidence 999999999999989999999999999986531 00 001111 122345789999999999999976
Q ss_pred C--CCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 299 R--SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 299 ~--~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+ ....+++||++++...++.++.+++.+++|....
T Consensus 212 ~~~~~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 248 (315)
T 2ydy_A 212 RMLDPSIKGTFHWSGNEQMTKYEMACAIADAFNLPSS 248 (315)
T ss_dssp HHTCTTCCEEEECCCSCCBCHHHHHHHHHHHTTCCCT
T ss_pred hccccCCCCeEEEcCCCcccHHHHHHHHHHHhCCChh
Confidence 3 1135789999999999999999999999987643
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.97 E-value=7.9e-30 Score=253.39 Aligned_cols=227 Identities=13% Similarity=0.091 Sum_probs=177.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+|+|||||||||||++|+++|+++|++|++++|+....... .....+++++.+|++|.+++
T Consensus 19 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-----------------l~~~~~~~~~~~Dl~d~~~~ 81 (333)
T 2q1w_A 19 SHMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREH-----------------LKDHPNLTFVEGSIADHALV 81 (333)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG-----------------SCCCTTEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhh-----------------HhhcCCceEEEEeCCCHHHH
Confidence 4678999999999999999999999999999999986432110 00115789999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCC-ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccC----CC----Cchhhhc
Q 013273 158 EPALGN--ASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNK----FG----FPAAILN 226 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~-~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~----~~----~~~~~~~ 226 (446)
.+++.+ +|+||||||.... ...++. +++|+.++.+++++|.+.++++|||+||.+++. .. .++. .
T Consensus 82 ~~~~~~~~~D~vih~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~--~ 157 (333)
T 2q1w_A 82 NQLIGDLQPDAVVHTAASYKDPDDWYND--TLTNCVGGSNVVQAAKKNNVGRFVYFQTALCYGVKPIQQPVRLDHPR--N 157 (333)
T ss_dssp HHHHHHHCCSEEEECCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGCSCCCSSSBCTTSCC--C
T ss_pred HHHHhccCCcEEEECceecCCCccCChH--HHHHHHHHHHHHHHHHHhCCCEEEEECcHHHhCCCcccCCCCcCCCC--C
Confidence 999987 9999999996543 122222 789999999999999999999999999987743 11 0111 3
Q ss_pred hh-hHHHHHHHHHHHHHHh-CCCCEEEEecCCccCCCcc--ccc-------ccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 227 LF-WGVLLWKRKAEEALIA-SGLPYTIVRPGGMERPTDA--YKE-------THNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 227 ~~-~~Y~~sK~~~E~~l~~-~gl~~tivRPg~v~gp~~~--~~~-------~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
+. ..|+.+|+.+|.+++. .. ++++|||+++|||+.. ... ....... ......+++++|+|++++.+
T Consensus 158 p~~~~Y~~sK~~~E~~~~~s~~-~~~ilR~~~v~gp~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~ai~~~ 234 (333)
T 2q1w_A 158 PANSSYAISKSANEDYLEYSGL-DFVTFRLANVVGPRNVSGPLPIFFQRLSEGKKCFV--TKARRDFVFVKDLARATVRA 234 (333)
T ss_dssp CTTCHHHHHHHHHHHHHHHHTC-CEEEEEESEEESTTCCSSHHHHHHHHHHTTCCCEE--EECEECEEEHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHhhhC-CeEEEeeceEECcCCcCcHHHHHHHHHHcCCeeeC--CCceEeeEEHHHHHHHHHHH
Confidence 45 7899999999999998 76 9999999999999731 100 0001111 22345789999999999999
Q ss_pred HhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 296 AKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 296 l~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+.++. +++||+.++...++.++.+++.+++|..
T Consensus 235 ~~~~~---g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 267 (333)
T 2q1w_A 235 VDGVG---HGAYHFSSGTDVAIKELYDAVVEAMALP 267 (333)
T ss_dssp HTTCC---CEEEECSCSCCEEHHHHHHHHHHHTTCS
T ss_pred HhcCC---CCEEEeCCCCCccHHHHHHHHHHHhCCC
Confidence 98765 8899999999999999999999999876
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.97 E-value=1.2e-29 Score=253.85 Aligned_cols=224 Identities=13% Similarity=0.128 Sum_probs=177.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC-CC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKL-GF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~-G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++.+|+|||||||||||++|++.|+++ |+ +|++++|++.+...+.+.+. ..++.++.+|++|.
T Consensus 18 ~~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---------------~~~v~~~~~Dl~d~ 82 (344)
T 2gn4_A 18 MLDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---------------DPRMRFFIGDVRDL 82 (344)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---------------CTTEEEEECCTTCH
T ss_pred hhCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---------------CCCEEEEECCCCCH
Confidence 466789999999999999999999999 97 99999999877666544321 15799999999999
Q ss_pred hcHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHH
Q 013273 155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVL 232 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~ 232 (446)
+++.++++++|+||||||.... ...++...+++|+.|+.+++++|.+.++++||++||..+. .+.+.|+
T Consensus 83 ~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~~v~~~V~~SS~~~~---------~p~~~Y~ 153 (344)
T 2gn4_A 83 ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLKNAISQVIALSTDKAA---------NPINLYG 153 (344)
T ss_dssp HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECCGGGS---------SCCSHHH
T ss_pred HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecCCccC---------CCccHHH
Confidence 9999999999999999996532 1233456788999999999999999999999999997652 2346799
Q ss_pred HHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc--------cc-ceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 233 LWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE--------TH-NITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 233 ~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~--------~~-~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.+|+.+|.+++. .|+++++||||++||+++.... .. .+.+. .......++|++|+|++++.++
T Consensus 154 ~sK~~~E~~~~~~~~~~~~~g~~~~~vRpg~v~g~~~~~i~~~~~~~~~g~~~~~i~-~~~~~r~~i~v~D~a~~v~~~l 232 (344)
T 2gn4_A 154 ATKLCSDKLFVSANNFKGSSQTQFSVVRYGNVVGSRGSVVPFFKKLVQNKASEIPIT-DIRMTRFWITLDEGVSFVLKSL 232 (344)
T ss_dssp HHHHHHHHHHHHGGGCCCSSCCEEEEECCCEETTCTTSHHHHHHHHHHHTCCCEEES-CTTCEEEEECHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCCcEEEEEEeccEECCCCCHHHHHHHHHHcCCCceEEe-CCCeEEeeEEHHHHHHHHHHHH
Confidence 999999999874 5799999999999998753211 11 12222 2223345799999999999999
Q ss_pred hCCCCCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 297 KNRSLSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 297 ~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
++.. .+++|++.++ ..++.++++.+.+.+
T Consensus 233 ~~~~--~g~~~~~~~~-~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 233 KRMH--GGEIFVPKIP-SMKMTDLAKALAPNT 261 (344)
T ss_dssp HHCC--SSCEEEECCC-EEEHHHHHHHHCTTC
T ss_pred hhcc--CCCEEecCCC-cEEHHHHHHHHHHhC
Confidence 8763 5789998776 467777777776543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=3.8e-29 Score=230.00 Aligned_cols=202 Identities=16% Similarity=0.152 Sum_probs=159.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|||||||||++++++|+++|++|++++|++++... ....+++++.+|+.|.+++.++
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~D~~~~~~~~~~ 64 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------------------EGPRPAHVVVGDVLQAADVDKT 64 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------------------SSCCCSEEEESCTTSHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccc-------------------ccCCceEEEEecCCCHHHHHHH
Confidence 789999999999999999999999999999998765321 0126799999999999999999
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
++++|+||||||.... . ...++|+.++.++++++++.+++|||++||.+++.... ....+...|+.+|..+|+
T Consensus 65 ~~~~d~vi~~a~~~~~--~---~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~~~~~~~--~~~~~~~~y~~~K~~~e~ 137 (206)
T 1hdo_A 65 VAGQDAVIVLLGTRND--L---SPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLWDPT--KVPPRLQAVTDDHIRMHK 137 (206)
T ss_dssp HTTCSEEEECCCCTTC--C---SCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCTT--CSCGGGHHHHHHHHHHHH
T ss_pred HcCCCEEEECccCCCC--C---CccchHHHHHHHHHHHHHHhCCCeEEEEeeeeeccCcc--cccccchhHHHHHHHHHH
Confidence 9999999999986543 1 23468999999999999999999999999987743221 111156789999999999
Q ss_pred HHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 241 ALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
++++.|+++++|||++++ ++.... .+.........+.+++++|+|++++.+++++. ..+++|||.++.
T Consensus 138 ~~~~~~i~~~~lrp~~~~-~~~~~~---~~~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~g~ 205 (206)
T 1hdo_A 138 VLRESGLKYVAVMPPHIG-DQPLTG---AYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSHQY 205 (206)
T ss_dssp HHHHTCSEEEEECCSEEE-CCCCCS---CCEEESSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEECCC
T ss_pred HHHhCCCCEEEEeCCccc-CCCCCc---ceEecccCCCCCCccCHHHHHHHHHHHhcCcc-ccccceeeeccc
Confidence 999999999999999983 221111 11111111111578999999999999999876 568999999874
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.7e-30 Score=256.37 Aligned_cols=234 Identities=12% Similarity=0.055 Sum_probs=180.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+||||||+||||++|++.|++. |++|++++|+.. ....+. ......+++++.+|++|.+++
T Consensus 1 MkvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~---------------~~~~~~~~~~~~~Dl~d~~~~ 65 (361)
T 1kew_A 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS---------------DISESNRYNFEHADICDSAEI 65 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT---------------TTTTCTTEEEEECCTTCHHHH
T ss_pred CEEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh---------------hhhcCCCeEEEECCCCCHHHH
Confidence 47999999999999999999998 799999999752 111110 001125799999999999999
Q ss_pred HHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC--CCC-------EEEEEccccccCCC-----
Q 013273 158 EPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA--KVN-------HFIMVSSLGTNKFG----- 219 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~-------r~V~vSS~~~~~~~----- 219 (446)
.+++. ++|+||||||.... ...++...+++|+.++.+++++|.+. +++ ||||+||.+++...
T Consensus 66 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~~~~~iv~~SS~~v~g~~~~~~~ 145 (361)
T 1kew_A 66 TRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDE 145 (361)
T ss_dssp HHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGG
T ss_pred HHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccccCceEEEeCCHHHhCCCccccc
Confidence 99997 89999999997542 23455667899999999999999988 877 99999998763321
Q ss_pred ----------CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-----------ccceeecc
Q 013273 220 ----------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-----------THNITLSQ 274 (446)
Q Consensus 220 ----------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-----------~~~~~~~~ 274 (446)
.++.+..+...|+.+|+.+|.+++. .|+++++|||+++||+...... ...+.+..
T Consensus 146 ~~~~~~~~~~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~vrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (361)
T 1kew_A 146 VENSVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYG 225 (361)
T ss_dssp SCTTSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEET
T ss_pred ccccccCCCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHhCCcEEEEeeceeECCCCCcccHHHHHHHHHHcCCCceEcC
Confidence 1222345677899999999998874 5999999999999999753100 01111112
Q ss_pred cCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 275 EDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 275 ~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
.......++|++|+|++++.+++++. .+++|||.++...++.++.+++.+++|..
T Consensus 226 ~~~~~~~~i~v~Dva~a~~~~~~~~~--~g~~~~v~~~~~~s~~e~~~~i~~~~g~~ 280 (361)
T 1kew_A 226 KGDQIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp TSCCEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred CCceeEeeEEHHHHHHHHHHHHhCCC--CCCEEEecCCCeeeHHHHHHHHHHHhCCc
Confidence 22234468999999999999998653 57899999998889999999999998764
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.4e-30 Score=250.75 Aligned_cols=226 Identities=13% Similarity=0.034 Sum_probs=169.4
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
+|||||||||||++|+++|+++| ++|++++|+...... ..+ .++. +.+|+.|.+.++++
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~--~~~-----------------~~~~-~~~d~~~~~~~~~~ 60 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF--VNL-----------------VDLN-IADYMDKEDFLIQI 60 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGG--HHH-----------------HTSC-CSEEEEHHHHHHHH
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchh--hhc-----------------Ccce-eccccccHHHHHHH
Confidence 48999999999999999999999 999999998754210 001 1222 67899999999999
Q ss_pred hcC-----CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 161 LGN-----ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 161 ~~~-----~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
+++ +|+||||||.......++...+++|+.++.+++++|++.++ ||||+||.+++... .++.+..+...
T Consensus 61 ~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~p~~~ 139 (310)
T 1eq2_A 61 MAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEKPLNV 139 (310)
T ss_dssp HTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGTTCCSCBCSSGGGCCCSSH
T ss_pred HhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEeeHHHhCCCCCCCCCCCCCCCCCCh
Confidence 875 99999999976544445566788999999999999999999 99999998764321 23344566778
Q ss_pred HHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc---------------ccceeecccCcc-cCCccCHHHHHH
Q 013273 231 VLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTL-FGGQVSNLQVAE 290 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~-~~~~v~~~DvA~ 290 (446)
|+.+|+.+|.+++. .|+++++|||+++||+++.... ...+.+...+.. ...++|++|+|+
T Consensus 140 Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~ 219 (310)
T 1eq2_A 140 YGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVAD 219 (310)
T ss_dssp HHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHcCCCEEEEeCCcEECcCCCCCCccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHH
Confidence 99999999999874 5899999999999999753110 011111122233 557899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+++.+++++. +++||++++...++.++.+++.+++|..
T Consensus 220 ~~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 257 (310)
T 1eq2_A 220 VNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG 257 (310)
T ss_dssp HHHHHHHHCC---CEEEEESCSCCBCHHHHHHHC-------
T ss_pred HHHHHHhcCC---CCeEEEeCCCccCHHHHHHHHHHHcCCC
Confidence 9999998775 7899999999999999999999998875
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.7e-29 Score=233.79 Aligned_cols=204 Identities=15% Similarity=0.131 Sum_probs=149.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++|++|++++|++++...+. .+++++.+|++|.++ ++
T Consensus 1 MkvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------------------~~~~~~~~D~~d~~~--~~ 58 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------------------KDINILQKDIFDLTL--SD 58 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------------------SSSEEEECCGGGCCH--HH
T ss_pred CeEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------------------CCCeEEeccccChhh--hh
Confidence 57999999999999999999999999999999987655421 578999999999887 88
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC------chhhhchhhHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLFWGVLLW 234 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~------~~~~~~~~~~Y~~s 234 (446)
+.++|+||||||.... ...+|+.++.+++++|++.+++|||++||.++..... ++....+...|+.+
T Consensus 59 ~~~~d~vi~~ag~~~~-------~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~~~~~~~~~~~y~~~ 131 (221)
T 3ew7_A 59 LSDQNVVVDAYGISPD-------EAEKHVTSLDHLISVLNGTVSPRLLVVGGAASLQIDEDGNTLLESKGLREAPYYPTA 131 (221)
T ss_dssp HTTCSEEEECCCSSTT-------TTTSHHHHHHHHHHHHCSCCSSEEEEECCCC-------------------CCCSCCH
T ss_pred hcCCCEEEECCcCCcc-------ccchHHHHHHHHHHHHHhcCCceEEEEecceEEEcCCCCccccccCCCCCHHHHHHH
Confidence 8999999999997432 2567999999999999999899999999986632211 11223345568899
Q ss_pred HHHHHHH--HH--hCCCCEEEEecCCccCCCcccccccceeecccC----cccCCccCHHHHHHHHHHHHhCCCCCCCcE
Q 013273 235 KRKAEEA--LI--ASGLPYTIVRPGGMERPTDAYKETHNITLSQED----TLFGGQVSNLQVAELLACMAKNRSLSYCKV 306 (446)
Q Consensus 235 K~~~E~~--l~--~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~----~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v 306 (446)
|...|.+ ++ ..|+++++|||+++||++.... .+...... .....+++++|+|++++.+++++. ..+++
T Consensus 132 k~~~e~~~~~~~~~~gi~~~ivrp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~ 207 (221)
T 3ew7_A 132 RAQAKQLEHLKSHQAEFSWTYISPSAMFEPGERTG---DYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPN-HLNEH 207 (221)
T ss_dssp HHHHHHHHHHHTTTTTSCEEEEECSSCCCCC------------------------CCCHHHHHHHHHHHHHSCS-CTTSE
T ss_pred HHHHHHHHHHHhhccCccEEEEeCcceecCCCccC---ceEeccccceecCCCCceEeHHHHHHHHHHHHhCcc-ccCCE
Confidence 9999876 66 6899999999999999843211 11111100 011258999999999999999987 77999
Q ss_pred EEEecCCCCCh
Q 013273 307 VEVIAETTAPL 317 (446)
Q Consensus 307 ~ni~~~~~~t~ 317 (446)
||++++...+.
T Consensus 208 ~~~~~~~~~~~ 218 (221)
T 3ew7_A 208 FTVAGKLEHHH 218 (221)
T ss_dssp EECCC------
T ss_pred EEECCCCcccc
Confidence 99999876544
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-29 Score=251.06 Aligned_cols=238 Identities=13% Similarity=0.011 Sum_probs=182.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+|||||||||||++|+++|+++|++|++++|+..+... ..++.+ + ...+++++.+|++|.+++.
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~--~~~~~~---------~--~~~~~~~~~~Dl~d~~~~~ 68 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFAS--WRLKEL---------G--IENDVKIIHMDLLEFSNII 68 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTT--HHHHHT---------T--CTTTEEECCCCTTCHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCccccc--ccHhhc---------c--ccCceeEEECCCCCHHHHH
Confidence 35799999999999999999999999999999998764321 111111 0 1247899999999999999
Q ss_pred HHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCC-CEEEEEccccccCCC-----Cchhhhchh
Q 013273 159 PALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV-NHFIMVSSLGTNKFG-----FPAAILNLF 228 (446)
Q Consensus 159 ~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v-~r~V~vSS~~~~~~~-----~~~~~~~~~ 228 (446)
+++.+ +|+||||||.... ...++...+++|+.++.+++++|++.++ ++|||+||.+++... .+.....+.
T Consensus 69 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~vyg~~~~~~~~e~~~~~~~ 148 (345)
T 2z1m_A 69 RTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTVKPDTKFYQASTSEMFGKVQEIPQTEKTPFYPR 148 (345)
T ss_dssp HHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTCEEEEEEEGGGGCSCSSSSBCTTSCCCCC
T ss_pred HHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEEechhhcCCCCCCCCCccCCCCCC
Confidence 99875 6999999996532 1345566788999999999999998887 899999998764321 223344567
Q ss_pred hHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccccc---------------cceeecccCcccCCccCHHHHH
Q 013273 229 WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKET---------------HNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 229 ~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~~---------------~~~~~~~~~~~~~~~v~~~DvA 289 (446)
..|+.+|+.+|.+++. .+++++++|+.++|||+...... ..............++|++|+|
T Consensus 149 ~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gpg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva 228 (345)
T 2z1m_A 149 SPYAVAKLFGHWITVNYREAYNMFACSGILFNHESPLRGIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYV 228 (345)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHhCCceEeeeeeeecCCCCCCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHH
Confidence 7899999999998864 58999999999999996422110 0000111122234689999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++++.+++++. +++||++++...++.++.+++.+++|...
T Consensus 229 ~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 268 (345)
T 2z1m_A 229 EAMWLMMQQPE---PDDYVIATGETHTVREFVEKAAKIAGFDI 268 (345)
T ss_dssp HHHHHHHTSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHhCCC---CceEEEeCCCCccHHHHHHHHHHHhCCCc
Confidence 99999998765 47999999999999999999999998753
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-29 Score=258.95 Aligned_cols=238 Identities=16% Similarity=0.166 Sum_probs=175.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH---HHHHHHHHHhh----hcccccccCCCCCCceEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA---ENLVQSVKQMK----LDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~---~~l~~~~~~~~----l~~~~~~~g~~~~~~v~~v~~D 150 (446)
..+++|||||||||||++|+++|++.|++|++++|+.... ..+.+.++... .+. ...++.++.+|
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~--------~~~~v~~v~~D 138 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEM--------MLSNIEVIVGD 138 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHH--------HHTTEEEEEEC
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhcccccccc--------ccCceEEEeCC
Confidence 4567999999999999999999999999999999998733 33333332210 000 01689999999
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCC---------CCc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKF---------GFP 221 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~---------~~~ 221 (446)
+.|.+.+. ++.++|+||||||... ...++...+++|+.++.+++++|++ ++++|||+||.++..+ ..+
T Consensus 139 l~d~~~l~-~~~~~d~Vih~A~~~~-~~~~~~~~~~~Nv~g~~~l~~aa~~-~~~~~v~~SS~~~G~~~~~~~~~~~~~E 215 (427)
T 4f6c_A 139 FECMDDVV-LPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSE 215 (427)
T ss_dssp C---CCCC-CSSCCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHH-TTCEEEEEEEGGGGSEECSSCSCCEECT
T ss_pred CCCcccCC-CcCCCCEEEECCcccC-CCCCHHHHHHHHHHHHHHHHHHHHh-cCCcEEEECchHhCCCccCCCCCccccc
Confidence 99988888 7889999999999754 2345677889999999999999999 7889999999887110 011
Q ss_pred hhh---hchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCCcccccccc--------e--------eec-ccCcc
Q 013273 222 AAI---LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN--------I--------TLS-QEDTL 278 (446)
Q Consensus 222 ~~~---~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~~~~~~~~~--------~--------~~~-~~~~~ 278 (446)
++. ..+...|+.+|+.+|.++++ .|+++++||||+|||+......... + .+. .....
T Consensus 216 ~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (427)
T 4f6c_A 216 ADVYKGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEM 295 (427)
T ss_dssp TCSCSSCCCCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCCCCTTGGGCHHHHHHHHHHHSSEEEHHHHTC
T ss_pred cccccCCCCCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCccccCcchHHHHHHHHHHHhcCCCCCccccc
Confidence 111 23677899999999999885 8999999999999999643210000 0 000 01123
Q ss_pred cCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
...+++++|+|++++.++.++. .+++||+.++..+++.++.+++.+ ++
T Consensus 296 ~~~~v~v~DvA~ai~~~~~~~~--~g~~~~l~~~~~~s~~el~~~i~~-~g 343 (427)
T 4f6c_A 296 PVDFSFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKR-KE 343 (427)
T ss_dssp EECCEEHHHHHHHHHHHTTSCC--CCSEEEESCSCCEEHHHHHHHHHS-SC
T ss_pred eEEEeeHHHHHHHHHHHHcCCC--CCCEEEecCCCCCcHHHHHHHHHH-cC
Confidence 4468999999999999998875 689999999999999999999998 44
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-30 Score=256.07 Aligned_cols=230 Identities=13% Similarity=0.041 Sum_probs=178.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+|+|||||||||||++|+++|+++| ++|++++|+...... .. ..++. +.+|+.|.+.
T Consensus 44 ~~~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~-----~~--------------~~~~~-~~~d~~~~~~ 103 (357)
T 2x6t_A 44 IEGRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKF-----VN--------------LVDLN-IADYMDKEDF 103 (357)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGG-----GG--------------TTTSC-CSEEEEHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchh-----hc--------------ccCce-EeeecCcHHH
Confidence 345789999999999999999999999 999999998654210 00 02233 6789999999
Q ss_pred HHHHhc-----CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhc
Q 013273 157 IEPALG-----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILN 226 (446)
Q Consensus 157 ~~~a~~-----~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~ 226 (446)
++++++ ++|+||||||.......++...+++|+.++.+++++|++.++ +|||+||.+++... .++.+..
T Consensus 104 ~~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~-r~V~~SS~~v~g~~~~~~~~E~~~~~ 182 (357)
T 2x6t_A 104 LIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREI-PFLYASSAATYGGRTSDFIESREYEK 182 (357)
T ss_dssp HHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTC-CEEEEEEGGGGCSCSSCCCSSGGGCC
T ss_pred HHHHHhhcccCCCCEEEECCcccCCccCCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEEcchHHhCCCCCCCcCCcCCCC
Confidence 999886 599999999976544445566788999999999999999998 99999998774321 2334455
Q ss_pred hhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc---------------cccceeecccCcc-cCCccCHH
Q 013273 227 LFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK---------------ETHNITLSQEDTL-FGGQVSNL 286 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~---------------~~~~~~~~~~~~~-~~~~v~~~ 286 (446)
+...|+.+|+.+|.+++. .|+++++|||+++||+++... ....+.+...... ...++|++
T Consensus 183 p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~ 262 (357)
T 2x6t_A 183 PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVG 262 (357)
T ss_dssp CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCGGGSCHHHHHHHHHHTTCCCEEETTGGGCEECEEEHH
T ss_pred CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCcccchHHHHHHHHHHcCCCcEEeCCCCcceEccEEHH
Confidence 677899999999999874 589999999999999975310 0011111112233 45789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
|+|++++.+++++. +++||++++...++.++.+++.+++|..
T Consensus 263 Dva~ai~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 304 (357)
T 2x6t_A 263 DVADVNLWFLENGV---SGIFNLGTGRAESFQAVADATLAYHKKG 304 (357)
T ss_dssp HHHHHHHHHHHHCC---CEEEEESCSCCEEHHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHhcCC---CCeEEecCCCcccHHHHHHHHHHHcCCC
Confidence 99999999998875 7899999999999999999999999876
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.4e-29 Score=249.40 Aligned_cols=220 Identities=15% Similarity=0.083 Sum_probs=174.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|++.|+++|++|++++|+. .+|+.|.+++.+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~L~~~g~~v~~~~r~~---------------------------------~~D~~d~~~~~~ 49 (321)
T 1e6u_A 3 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRD---------------------------------ELNLLDSRAVHD 49 (321)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTT---------------------------------TCCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEecCc---------------------------------cCCccCHHHHHH
Confidence 47899999999999999999999999999988753 179999999999
Q ss_pred Hhc--CCCEEEEcccCCCC---ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchh----hh
Q 013273 160 ALG--NASVVICCIGASEK---EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAA----IL 225 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~---~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~----~~ 225 (446)
++. ++|+||||||.... ...++...+++|+.++.+++++|++.+++||||+||.+++... .++. ..
T Consensus 50 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~~~~ 129 (321)
T 1e6u_A 50 FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 129 (321)
T ss_dssp HHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred HHHhcCCCEEEEcCeecCCcchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEccHHHcCCCCCCCcCccccccCCC
Confidence 998 99999999986531 1234456688999999999999999999999999998774321 1222 23
Q ss_pred chh-hHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-------c-------------cceeecccCcccC
Q 013273 226 NLF-WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------T-------------HNITLSQEDTLFG 280 (446)
Q Consensus 226 ~~~-~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-------~-------------~~~~~~~~~~~~~ 280 (446)
.+. +.|+.+|..+|++++. .|+++++|||+++||+++.... . ..+.+........
T Consensus 130 ~p~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~ 209 (321)
T 1e6u_A 130 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR 209 (321)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred CCCCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCCCCccHHHHHHHHHHhhhcCCCceEEcCCCCEEE
Confidence 343 5899999999999875 5999999999999999754110 0 1122222233344
Q ss_pred CccCHHHHHHHHHHHHhCCCCC-------CCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRSLS-------YCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~~~-------~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
.+||++|+|++++.+++++... .+++||++++...++.++.+++.+++|...
T Consensus 210 ~~i~v~Dva~~~~~~~~~~~~~~~~~~~~~~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 268 (321)
T 1e6u_A 210 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKG 268 (321)
T ss_dssp CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCS
T ss_pred EeEEHHHHHHHHHHHHhCcccccccccccCCceEEeCCCCCccHHHHHHHHHHHhCCCC
Confidence 7899999999999999886521 268999999999999999999999998754
|
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-28 Score=257.06 Aligned_cols=248 Identities=17% Similarity=0.139 Sum_probs=181.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC---CCeEEEEEcCchhHHHHHHHHHHhhhcc-ccc---ccCCCCCCceEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL---GFRVRAGVRSVQRAENLVQSVKQMKLDG-ELA---NKGIQPVEMLELVECD 150 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~---G~~V~~~~R~~~~~~~l~~~~~~~~l~~-~~~---~~g~~~~~~v~~v~~D 150 (446)
..+|+|||||||||||++|+++|+++ |++|++++|+.+....+.+ +... +.. ... ........+++++.+|
T Consensus 71 ~~~~~VLVTGatG~IG~~l~~~Ll~~~~~g~~V~~l~R~~~~~~~~~~-l~~~-~~~~~~~~~~~~~~~~~~~v~~v~~D 148 (478)
T 4dqv_A 71 PELRTVLLTGATGFLGRYLVLELLRRLDVDGRLICLVRAESDEDARRR-LEKT-FDSGDPELLRHFKELAADRLEVVAGD 148 (478)
T ss_dssp SCCCEEEEECTTSHHHHHHHHHHHHHSCTTCEEEEEECSSSHHHHHHH-HHGG-GCSSCHHHHHHHHHHHTTTEEEEECC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhcCCCCCEEEEEECCCCcHHHHHH-HHHH-HHhcchhhhhhhhhhccCceEEEEeE
Confidence 46789999999999999999999999 9999999999876543322 2111 000 000 0000011589999999
Q ss_pred CC------ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----
Q 013273 151 LE------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----- 219 (446)
Q Consensus 151 l~------d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----- 219 (446)
++ |.+.+.++++++|+||||||.... .++...+++|+.++.+++++|++.++++|||+||.+++...
T Consensus 149 l~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~~--~~~~~~~~~Nv~gt~~ll~aa~~~~~~~~V~iSS~~v~~~~~~~~~ 226 (478)
T 4dqv_A 149 KSEPDLGLDQPMWRRLAETVDLIVDSAAMVNA--FPYHELFGPNVAGTAELIRIALTTKLKPFTYVSTADVGAAIEPSAF 226 (478)
T ss_dssp TTSGGGGCCHHHHHHHHHHCCEEEECCSSCSB--SSCCEEHHHHHHHHHHHHHHHTSSSCCCEEEEEEGGGGTTSCTTTC
T ss_pred CCCcccCCCHHHHHHHHcCCCEEEECccccCC--cCHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeehhhcCccCCCCc
Confidence 98 666889999999999999997654 56677889999999999999999999999999998774321
Q ss_pred Cchhhhchh-----------hHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc--cccc----ee-----ec
Q 013273 220 FPAAILNLF-----------WGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK--ETHN----IT-----LS 273 (446)
Q Consensus 220 ~~~~~~~~~-----------~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~--~~~~----~~-----~~ 273 (446)
.++....+. +.|+.+|+.+|.++++ .|+++++||||+|||+..... .... +. .+
T Consensus 227 ~E~~~~~p~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~~g~~~~~~~~~~l~~~~~~~g 306 (478)
T 4dqv_A 227 TEDADIRVISPTRTVDGGWAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSYAGQLNMSDWVTRMVLSLMATG 306 (478)
T ss_dssp CSSSCHHHHCCEEECCTTSEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSSSSCCCTTBHHHHHHHHHHHHC
T ss_pred CCcccccccCcccccccccccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCccCCcCCHHHHHHHHHHHHHHcC
Confidence 112222222 3499999999999875 599999999999999843110 0000 00 00
Q ss_pred cc-------------CcccCCccCHHHHHHHHHHHHhC----CCCCCCcEEEEecCCC--CChhhHHHHHHhccCCC
Q 013273 274 QE-------------DTLFGGQVSNLQVAELLACMAKN----RSLSYCKVVEVIAETT--APLTPMEELLAKIPSQR 331 (446)
Q Consensus 274 ~~-------------~~~~~~~v~~~DvA~ai~~ll~~----~~~~~~~v~ni~~~~~--~t~~~i~e~l~~i~~~~ 331 (446)
.. .....+++|++|+|++++.++.+ +. ..+++||++++.. +++.++.+++.++ +..
T Consensus 307 ~~P~~~~~~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~~-~~~~~ynv~~~~~~~~s~~el~~~l~~~-g~~ 381 (478)
T 4dqv_A 307 IAPRSFYEPDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSSL-AGFATYHVMNPHDDGIGLDEYVDWLIEA-GYP 381 (478)
T ss_dssp EEESCSBCCCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CCC-CSEEEEEESCCCCSSCSHHHHHHHHHHT-TCS
T ss_pred cccccccccccccccccceeeeeeHHHHHHHHHHHHhhcccCCC-CCCceEEecCCCCCCcCHHHHHHHHHHc-CCC
Confidence 00 02334679999999999999986 33 5689999999987 8999999999996 443
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=1.3e-29 Score=252.45 Aligned_cols=235 Identities=13% Similarity=0.088 Sum_probs=174.5
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.++.+|+|||||||||||++|++.|+++|++|++++|+....... +.. .....+++++.+|+.|..
T Consensus 23 ~~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~---~~~-----------~~~~~~~~~~~~D~~~~~ 88 (343)
T 2b69_A 23 MEKDRKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRN---VEH-----------WIGHENFELINHDVVEPL 88 (343)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGG---TGG-----------GTTCTTEEEEECCTTSCC
T ss_pred cccCCCEEEEEcCccHHHHHHHHHHHHCCCEEEEEeCCCccchhh---hhh-----------hccCCceEEEeCccCChh
Confidence 345678999999999999999999999999999999975421110 000 011257999999998753
Q ss_pred cHHHHhcCCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cch-----h
Q 013273 156 QIEPALGNASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPA-----A 223 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~-----~ 223 (446)
+.++|+||||||..... ..++...+++|+.++.+++++|++.++ ||||+||.+++... .++ .
T Consensus 89 -----~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~v~g~~~~~~~~E~~~~~~~ 162 (343)
T 2b69_A 89 -----YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVN 162 (343)
T ss_dssp -----CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCC
T ss_pred -----hcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCC-cEEEECcHHHhCCCCCCCCcccccccCC
Confidence 57899999999965421 234455678999999999999999887 99999998774321 111 2
Q ss_pred hhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-------------cccceeecccCcccCCccCHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------ETHNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-------------~~~~~~~~~~~~~~~~~v~~~ 286 (446)
+..+...|+.+|+.+|.+++ +.|++++++||+++||++.... ....+.+.........++|++
T Consensus 163 ~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~ 242 (343)
T 2b69_A 163 PIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVS 242 (343)
T ss_dssp SSSTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEEcceeCcCCCCCcccHHHHHHHHHHcCCCceEcCCCCeEEeeEeHH
Confidence 34566789999999999875 3699999999999999964211 011111112222344689999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
|+|++++.+++++. +++||++++...++.++.+++.+++|....
T Consensus 243 Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~~~ 286 (343)
T 2b69_A 243 DLVNGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSE 286 (343)
T ss_dssp HHHHHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHHHHhcCC---CCeEEecCCCCCcHHHHHHHHHHHhCCCCC
Confidence 99999999998653 679999999989999999999999987643
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=7.1e-29 Score=247.83 Aligned_cols=228 Identities=14% Similarity=0.141 Sum_probs=175.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+|+|||||||||||++|++.|+++|++|++++|+.+......+.++.+ . ..+++++.+|+.|.+++
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l--~----------~~~v~~~~~Dl~d~~~l 75 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKAL--E----------DKGAIIVYGLINEQEAM 75 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHH--H----------HTTCEEEECCTTCHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHH--H----------hCCcEEEEeecCCHHHH
Confidence 34578999999999999999999999999999999872211111111111 0 15799999999999999
Q ss_pred HHHhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 158 EPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
.++++ ++|+|||++|.. |+.++.+++++|++.+ ++|||+ |+.+.. ..+.....+...|+.+
T Consensus 76 ~~~~~~~~~d~Vi~~a~~~-------------n~~~~~~l~~aa~~~g~v~~~v~-S~~g~~--~~e~~~~~p~~~y~~s 139 (346)
T 3i6i_A 76 EKILKEHEIDIVVSTVGGE-------------SILDQIALVKAMKAVGTIKRFLP-SEFGHD--VNRADPVEPGLNMYRE 139 (346)
T ss_dssp HHHHHHTTCCEEEECCCGG-------------GGGGHHHHHHHHHHHCCCSEEEC-SCCSSC--TTTCCCCTTHHHHHHH
T ss_pred HHHHhhCCCCEEEECCchh-------------hHHHHHHHHHHHHHcCCceEEee-cccCCC--CCccCcCCCcchHHHH
Confidence 99999 999999999862 7888999999999999 999986 665542 1223334567789999
Q ss_pred HHHHHHHHHhCCCCEEEEecCCccCCCcccc--------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcE
Q 013273 235 KRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 306 (446)
Q Consensus 235 K~~~E~~l~~~gl~~tivRPg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v 306 (446)
|+.+|+++++.|++++++|||+++|...... ....+.+...+.....+++++|+|++++.++.++. ..+++
T Consensus 140 K~~~e~~l~~~g~~~tivrpg~~~g~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~ 218 (346)
T 3i6i_A 140 KRRVRQLVEESGIPFTYICCNSIASWPYYNNIHPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVR-TLNKS 218 (346)
T ss_dssp HHHHHHHHHHTTCCBEEEECCEESSCCCSCC-----CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGG-GTTEE
T ss_pred HHHHHHHHHHcCCCEEEEEecccccccCccccccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCcc-ccCeE
Confidence 9999999999999999999999998642111 11122222233334568999999999999999875 56889
Q ss_pred EEEec-CCCCChhhHHHHHHhccCCCCCC
Q 013273 307 VEVIA-ETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 307 ~ni~~-~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
|++.+ +..+++.++.+++++++|.....
T Consensus 219 ~~i~g~~~~~s~~e~~~~~~~~~g~~~~~ 247 (346)
T 3i6i_A 219 VHFRPSCNCLNINELASVWEKKIGRTLPR 247 (346)
T ss_dssp EECCCGGGEECHHHHHHHHHHHHTSCCCE
T ss_pred EEEeCCCCCCCHHHHHHHHHHHHCCCCce
Confidence 99985 47789999999999999987543
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.8e-29 Score=247.70 Aligned_cols=237 Identities=17% Similarity=0.198 Sum_probs=169.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++||||||+||||++|+++|+++|++|++++|+.+....+.. +..+ .+ ...+++++.+|++|.+++.
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~-~~~~--~~--------~~~~~~~~~~Dl~d~~~~~ 72 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKH-LLDL--PK--------AETHLTLWKADLADEGSFD 72 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHH-HHTS--TT--------HHHHEEEEECCTTSTTTTH
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHH-HHhc--cc--------CCCeEEEEEcCCCCHHHHH
Confidence 45789999999999999999999999999999998764332211 1110 00 0136899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCC-CCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCC-------Cchhh-----
Q 013273 159 PALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFG-------FPAAI----- 224 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~-~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~-------~~~~~----- 224 (446)
+++.++|+|||+|+.......++ ...+++|+.|+.+++++|++++ ++||||+||.++.... .++..
T Consensus 73 ~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~~~~~~~~~~~~~~E~~~~~~~~ 152 (337)
T 2c29_D 73 EAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAGTVNIQEHQLPVYDESCWSDMEF 152 (337)
T ss_dssp HHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGGGTSCSSSCCSEECTTCCCCHHH
T ss_pred HHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHhhcccCCCCCcccCcccCCchhh
Confidence 99999999999998653221222 2367899999999999999887 8999999997642111 11110
Q ss_pred ---h-chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccccee-----ecccCccc-----CCccCHH
Q 013273 225 ---L-NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNIT-----LSQEDTLF-----GGQVSNL 286 (446)
Q Consensus 225 ---~-~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~-----~~~~~~~~-----~~~v~~~ 286 (446)
. .+.+.|+.+|..+|.+++ .+|+++++|||+++|||+........+. +......+ ..++|++
T Consensus 153 ~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~v~ 232 (337)
T 2c29_D 153 CRAKKMTAWMYFVSKTLAEQAAWKYAKENNIDFITIIPTLVVGPFIMSSMPPSLITALSPITGNEAHYSIIRQGQFVHLD 232 (337)
T ss_dssp HHHHCCTTHHHHHHHHHHHHHHHHHHHHHTCCEEEEEECEEESCCSCSSCCHHHHHHTHHHHTCGGGHHHHTEEEEEEHH
T ss_pred hcccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCCccccccCCCCEEEHH
Confidence 0 144579999999998875 3699999999999999964321000000 00011111 2389999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
|+|++++.+++++. .+++|++.++ ..++.++.+++.+.++
T Consensus 233 Dva~a~~~~~~~~~--~~~~~~~~~~-~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 233 DLCNAHIYLFENPK--AEGRYICSSH-DCIILDLAKMLREKYP 272 (337)
T ss_dssp HHHHHHHHHHHCTT--CCEEEEECCE-EEEHHHHHHHHHHHCT
T ss_pred HHHHHHHHHhcCcc--cCceEEEeCC-CCCHHHHHHHHHHHCC
Confidence 99999999998754 2457866554 5788999999998764
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=5.5e-29 Score=251.03 Aligned_cols=237 Identities=15% Similarity=-0.016 Sum_probs=179.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-----HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|+||||||+||||++|++.|+++|++|++++|+... ...+.+.... ....+++++.+|+.|.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~------------~~~~~~~~~~~Dl~d~~ 92 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNPQA------------HIEGNMKLHYGDLTDST 92 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCHH
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCccccchhhHHHHhhhhcc------------ccCCCceEEEccCCCHH
Confidence 689999999999999999999999999999998643 1111000000 01257899999999999
Q ss_pred cHHHHhcC--CCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCC---CEEEEEccccccCCC-----Cchh
Q 013273 156 QIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPAA 223 (446)
Q Consensus 156 ~~~~a~~~--~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v---~r~V~vSS~~~~~~~-----~~~~ 223 (446)
++.+++.+ +|+||||||..... ..++...+++|+.++.+++++|++.++ ++|||+||.+++... .++.
T Consensus 93 ~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~ 172 (375)
T 1t2a_A 93 CLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKETT 172 (375)
T ss_dssp HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTTS
T ss_pred HHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHHhCCCccceEEEecchhhhCCCCCCCCCccC
Confidence 99999875 69999999965321 234556788999999999999999987 899999998774321 2233
Q ss_pred hhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------c-cceeecccCcccCCccC
Q 013273 224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------T-HNITLSQEDTLFGGQVS 284 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~-~~~~~~~~~~~~~~~v~ 284 (446)
+..+...|+.+|+.+|.+++. .|++++++|++++|||+..... . ..............++|
T Consensus 173 ~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~ 252 (375)
T 1t2a_A 173 PFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWGH 252 (375)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHhCCCEEEEecccccCCCCCCCcchHHHHHHHHHHHcCCCceeEeCCCCceeeeEE
Confidence 445677899999999998864 5999999999999998632110 0 00011112223446899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++|+|++++.+++++. +++||++++...++.++.+++.+++|...
T Consensus 253 v~Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~~ 297 (375)
T 1t2a_A 253 AKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKTI 297 (375)
T ss_dssp HHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHhcCC---CceEEEeCCCcccHHHHHHHHHHHhCCCc
Confidence 9999999999998765 48999999999999999999999998753
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=6.4e-29 Score=240.57 Aligned_cols=212 Identities=20% Similarity=0.211 Sum_probs=169.2
Q ss_pred EEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|||||||||||+++++.|+++ |++|++++|++++...+.. .+++++.+|+.|.+++.+
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~-------------------~~~~~~~~D~~d~~~~~~ 61 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALAA-------------------QGITVRQADYGDEAALTS 61 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHHH-------------------TTCEEEECCTTCHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhhc-------------------CCCeEEEcCCCCHHHHHH
Confidence 4899999999999999999998 9999999999876554321 468999999999999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE 239 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (446)
+++++|+||||||... ..|+.++.+++++|++.+++|||++||.++.. . ...|+.+|..+|
T Consensus 62 ~~~~~d~vi~~a~~~~----------~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~~~--------~-~~~y~~sK~~~e 122 (286)
T 2zcu_A 62 ALQGVEKLLLISSSEV----------GQRAPQHRNVINAAKAAGVKFIAYTSLLHADT--------S-PLGLADEHIETE 122 (286)
T ss_dssp HTTTCSEEEECC------------------CHHHHHHHHHHHHTCCEEEEEEETTTTT--------C-CSTTHHHHHHHH
T ss_pred HHhCCCEEEEeCCCCc----------hHHHHHHHHHHHHHHHcCCCEEEEECCCCCCC--------C-cchhHHHHHHHH
Confidence 9999999999998521 13788999999999999999999999987741 1 136999999999
Q ss_pred HHHHhCCCCEEEEecCCccCCCcccc----cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 240 EALIASGLPYTIVRPGGMERPTDAYK----ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 240 ~~l~~~gl~~tivRPg~v~gp~~~~~----~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+++++.|+++++|||++++++...+. ....+... .......++|++|+|++++.++.++. ..+++||+.++...
T Consensus 123 ~~~~~~~~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~~~Dva~~~~~~~~~~~-~~g~~~~i~~~~~~ 200 (286)
T 2zcu_A 123 KMLADSGIVYTLLRNGWYSENYLASAPAALEHGVFIGA-AGDGKIASATRADYAAAAARVISEAG-HEGKVYELAGDSAW 200 (286)
T ss_dssp HHHHHHCSEEEEEEECCBHHHHHTTHHHHHHHTEEEES-CTTCCBCCBCHHHHHHHHHHHHHSSS-CTTCEEEECCSSCB
T ss_pred HHHHHcCCCeEEEeChHHhhhhHHHhHHhhcCCceecc-CCCCccccccHHHHHHHHHHHhcCCC-CCCceEEEeCCCcC
Confidence 99999999999999988776532110 11112222 22334578999999999999999865 46889999999889
Q ss_pred ChhhHHHHHHhccCCCCC
Q 013273 316 PLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 316 t~~~i~e~l~~i~~~~~~ 333 (446)
++.++.+++.+++|....
T Consensus 201 s~~e~~~~i~~~~g~~~~ 218 (286)
T 2zcu_A 201 TLTQLAAELTKQSGKQVT 218 (286)
T ss_dssp CHHHHHHHHHHHHSSCCE
T ss_pred CHHHHHHHHHHHHCCCCc
Confidence 999999999999987643
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.6e-29 Score=245.95 Aligned_cols=214 Identities=14% Similarity=0.122 Sum_probs=173.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
..++|||||||||||++|+++|+++|++|++++|+. +|+.|.+++.
T Consensus 11 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~----------------------------------~Dl~d~~~~~ 56 (292)
T 1vl0_A 11 HHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------------LDITNVLAVN 56 (292)
T ss_dssp -CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------------CCTTCHHHHH
T ss_pred ccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc----------------------------------CCCCCHHHHH
Confidence 346899999999999999999999999999999862 7999999999
Q ss_pred HHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhchhh
Q 013273 159 PALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFW 229 (446)
Q Consensus 159 ~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~ 229 (446)
+++. ++|+||||||.... ...++...+++|+.++.+++++|++.++ ||||+||.+++... .++.+..+.+
T Consensus 57 ~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~-~iv~~SS~~v~~~~~~~~~~E~~~~~~~~ 135 (292)
T 1vl0_A 57 KFFNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQS 135 (292)
T ss_dssp HHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCS
T ss_pred HHHHhcCCCEEEECCccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHcCC-eEEEechHHeECCCCCCCCCCCCCCCCcc
Confidence 9998 89999999996542 1244566789999999999999999888 99999998764321 2233345677
Q ss_pred HHHHHHHHHHHHHHhCCCCEEEEecCCccCCCccccc--------ccceeecccCcccCCccCHHHHHHHHHHHHhCCCC
Q 013273 230 GVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL 301 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~--------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~ 301 (446)
.|+.+|+.+|.+++..+.++++|||+++||++..+.. ...+.+. ......++|++|+|++++.+++++
T Consensus 136 ~Y~~sK~~~E~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~-- 211 (292)
T 1vl0_A 136 AYGKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEK-- 211 (292)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHT--
T ss_pred HHHHHHHHHHHHHHhhCCCeEEEeeeeeeCCCcChHHHHHHHHhcCCcEEee--cCeeeCCccHHHHHHHHHHHHhcC--
Confidence 8999999999999988889999999999999432211 0111111 123457899999999999999876
Q ss_pred CCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 302 ~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
.+++||++++...++.++.+++.+++|...
T Consensus 212 -~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 241 (292)
T 1vl0_A 212 -NYGTFHCTCKGICSWYDFAVEIFRLTGIDV 241 (292)
T ss_dssp -CCEEEECCCBSCEEHHHHHHHHHHHHCCCC
T ss_pred -CCcEEEecCCCCccHHHHHHHHHHHhCCCC
Confidence 488999999998999999999999998754
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.3e-29 Score=240.86 Aligned_cols=205 Identities=17% Similarity=0.072 Sum_probs=168.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+||||||+||||++|++.|+++|++|++++|++.+.. ..+++++.+|++|.+++.
T Consensus 2 ~~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~ 59 (267)
T 3rft_A 2 AMKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----------------------GPNEECVQCDLADANAVN 59 (267)
T ss_dssp CEEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----------------------CTTEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----------------------CCCCEEEEcCCCCHHHHH
Confidence 3578999999999999999999999999999999875421 267999999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------CchhhhchhhHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVL 232 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~~~~~Y~ 232 (446)
++++++|+||||||... ..+++..+++|+.|+.++++++++++++||||+||..+.... .++.+..+...|+
T Consensus 60 ~~~~~~D~vi~~Ag~~~--~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~~g~~~~~~~~~e~~~~~~~~~Y~ 137 (267)
T 3rft_A 60 AMVAGCDGIVHLGGISV--EKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHTIGYYPQTERLGPDVPARPDGLYG 137 (267)
T ss_dssp HHHTTCSEEEECCSCCS--CCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGTTSBTTSCBCTTSCCCCCSHHH
T ss_pred HHHcCCCEEEECCCCcC--cCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHHhCCCCCCCCCCCCCCCCCCChHH
Confidence 99999999999999742 344566789999999999999999999999999998764321 1223445667899
Q ss_pred HHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEE
Q 013273 233 LWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE 308 (446)
Q Consensus 233 ~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~n 308 (446)
.+|+.+|.+++ +.|+++++|||+.+|++.. .......+++++|+++++..+++.+. ..+.+++
T Consensus 138 ~sK~~~e~~~~~~a~~~g~~~~~vr~~~v~~~~~------------~~~~~~~~~~~~d~a~~~~~~~~~~~-~~~~~~~ 204 (267)
T 3rft_A 138 VSKCFGENLARMYFDKFGQETALVRIGSCTPEPN------------NYRMLSTWFSHDDFVSLIEAVFRAPV-LGCPVVW 204 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCEEEEEECBCSSSCC------------STTHHHHBCCHHHHHHHHHHHHHCSC-CCSCEEE
T ss_pred HHHHHHHHHHHHHHHHhCCeEEEEEeecccCCCC------------CCCceeeEEcHHHHHHHHHHHHhCCC-CCceEEE
Confidence 99999998876 5799999999999998721 11223357999999999999999876 4567888
Q ss_pred EecCCCCChhhH
Q 013273 309 VIAETTAPLTPM 320 (446)
Q Consensus 309 i~~~~~~t~~~i 320 (446)
++++...++.++
T Consensus 205 ~~s~~~~~~~~~ 216 (267)
T 3rft_A 205 GASANDAGWWDN 216 (267)
T ss_dssp ECCCCTTCCBCC
T ss_pred EeCCCCCCcccC
Confidence 888876665554
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=5.2e-29 Score=247.34 Aligned_cols=239 Identities=16% Similarity=0.126 Sum_probs=174.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+||||++|+++|+++|++|++++|.........+.+... . + .++.++.+|++|.+++.++
T Consensus 1 m~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~~~--~------~----~~~~~~~~Dl~~~~~~~~~ 68 (338)
T 1udb_A 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL--G------G----KHPTFVEGDIRNEALMTEI 68 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH--H------T----SCCEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHHhh--c------C----CcceEEEccCCCHHHHHHH
Confidence 47999999999999999999999999999987532211111112111 0 1 4688999999999999998
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhch-hhH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL-FWG 230 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~-~~~ 230 (446)
+. ++|+||||||.... ...++...+++|+.++.+++++|++.++++||++||.+++... .++.+..+ ...
T Consensus 69 ~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~~~g~~~~~~~~e~~~~~~~~~~ 148 (338)
T 1udb_A 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSP 148 (338)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred hhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccHHHhCCCCCCCcCcccCCCCCCCh
Confidence 86 59999999986432 1223445688999999999999999899999999998764321 11122222 678
Q ss_pred HHHHHHHHHHHHHh----C-CCCEEEEecCCccCCCcc--ccc--------------------ccceeecc------cCc
Q 013273 231 VLLWKRKAEEALIA----S-GLPYTIVRPGGMERPTDA--YKE--------------------THNITLSQ------EDT 277 (446)
Q Consensus 231 Y~~sK~~~E~~l~~----~-gl~~tivRPg~v~gp~~~--~~~--------------------~~~~~~~~------~~~ 277 (446)
|+.+|+.+|.+++. . |++++++||+++||+... +.. ...+.+.. .+.
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~ 228 (338)
T 1udb_A 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSS
T ss_pred HHHHHHHHHHHHHHHHHhcCCCceEEEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCc
Confidence 99999999998864 3 899999999999988421 000 00011100 112
Q ss_pred ccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
....+||++|+|++++.++++.. ...+++||++++...++.++.+++.+++|..
T Consensus 229 ~~~~~i~v~Dva~a~~~~l~~~~~~~~~~~yni~~~~~~s~~e~~~~i~~~~g~~ 283 (338)
T 1udb_A 229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKP 283 (338)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTSC
T ss_pred eeeeeEEHHHHHHHHHHHHhhhhccCCCcEEEecCCCceeHHHHHHHHHHHhCCC
Confidence 23368999999999999997531 1234799999998899999999999999865
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.96 E-value=2.5e-29 Score=249.60 Aligned_cols=235 Identities=20% Similarity=0.202 Sum_probs=166.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|+++|+++|++|++++|+.+....+. .+..+ . ...+++++.+|++|.+++.+
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~-~~~~~--~---------~~~~~~~~~~Dl~d~~~~~~ 76 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVS-HLLEL--Q---------ELGDLKIFRADLTDELSFEA 76 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTH-HHHHH--G---------GGSCEEEEECCTTTSSSSHH
T ss_pred CCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHH-HHHhc--C---------CCCcEEEEecCCCChHHHHH
Confidence 578999999999999999999999999999999865422110 01111 0 01468999999999999999
Q ss_pred HhcCCCEEEEcccCCCCccCCC-CCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccC---------CCCchhh----
Q 013273 160 ALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNK---------FGFPAAI---- 224 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~-~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~---------~~~~~~~---- 224 (446)
++.++|+|||+|+.......++ ...+++|+.|+.+++++|++++ ++||||+||.++.. .-.++..
T Consensus 77 ~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~~~~~~~~~~~~~~~~~E~~~~~~~ 156 (338)
T 2rh8_A 77 PIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSAAAVTINQLDGTGLVVDEKNWTDIE 156 (338)
T ss_dssp HHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCSCCCCCTTTTTCC-
T ss_pred HHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecHHHeecCCcCCCCcccChhhccchh
Confidence 9999999999998653322333 3378999999999999999985 89999999976310 1111111
Q ss_pred ----hc-hhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccce--e---ecccCccc-----------
Q 013273 225 ----LN-LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI--T---LSQEDTLF----------- 279 (446)
Q Consensus 225 ----~~-~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~--~---~~~~~~~~----------- 279 (446)
.. +.+.|+.+|..+|.+++ ++|+++++|||+++|||+........+ . +......+
T Consensus 157 ~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lrp~~v~Gp~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 236 (338)
T 2rh8_A 157 FLTSAKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGSSLTSDVPSSIGLAMSLITGNEFLINGMKGMQMLSG 236 (338)
T ss_dssp ------CCCCCCTTSCCHHHHHHHHHHHHHTCCEEEEEECEEESCCSSSSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHS
T ss_pred hccccCCccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCCCCCCchHHHHHHHHcCCccccccccccccccC
Confidence 11 11259999999998875 369999999999999996532110000 0 00000000
Q ss_pred -CCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 280 -GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 280 -~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
..++|++|+|++++.+++++. .+++|+++++ ..++.++.+++.+.++
T Consensus 237 ~~~~i~v~Dva~a~~~~~~~~~--~~~~~~~~~~-~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 237 SVSIAHVEDVCRAHIFVAEKES--ASGRYICCAA-NTSVPELAKFLSKRYP 284 (338)
T ss_dssp SEEEEEHHHHHHHHHHHHHCTT--CCEEEEECSE-EECHHHHHHHHHHHCT
T ss_pred cccEEEHHHHHHHHHHHHcCCC--cCCcEEEecC-CCCHHHHHHHHHHhCC
Confidence 158999999999999998754 2567888765 5789999999988765
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.96 E-value=6.6e-29 Score=244.56 Aligned_cols=233 Identities=20% Similarity=0.218 Sum_probs=163.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-Cchh---HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++|||||||||||++|+++|+++|++|++++| +.+. ...+ .. +.+ ...+++++.+|++|.+
T Consensus 1 ~k~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~----~~--~~~--------~~~~~~~~~~Dl~d~~ 66 (322)
T 2p4h_X 1 KGRVCVTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSFL----TN--LPG--------ASEKLHFFNADLSNPD 66 (322)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHHH----HT--STT--------HHHHEEECCCCTTCGG
T ss_pred CCEEEEECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHHH----Hh--hhc--------cCCceEEEecCCCCHH
Confidence 368999999999999999999999999999998 6532 1111 10 000 0135889999999999
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCC-CCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCC-------chh---
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDI-TGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF-------PAA--- 223 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~-~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~-------~~~--- 223 (446)
+++++++++|+|||||+.......++ ...+++|+.|+.+++++|++. +++||||+||.++..... ++.
T Consensus 67 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~~~~~~~~~~~~~~e~~~~~ 146 (322)
T 2p4h_X 67 SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGSAVSFNGKDKDVLDESDWSD 146 (322)
T ss_dssp GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGGGTSCSSSCCSEECTTCCCC
T ss_pred HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHHHcccCCCCCeecCCccccc
Confidence 99999999999999997543222232 337889999999999999988 789999999976422110 110
Q ss_pred -----hhchh-hHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccce------eecccCcc---cCCccC
Q 013273 224 -----ILNLF-WGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI------TLSQEDTL---FGGQVS 284 (446)
Q Consensus 224 -----~~~~~-~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~------~~~~~~~~---~~~~v~ 284 (446)
...+. +.|+.+|+.+|.+++ .+|+++++|||+++|||.........+ ..+....+ ...++|
T Consensus 147 ~~~~~~~~p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~~v~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~i~ 226 (322)
T 2p4h_X 147 VDLLRSVKPFGWNYAVSKTLAEKAVLEFGEQNGIDVVTLILPFIVGRFVCPKLPDSIEKALVLVLGKKEQIGVTRFHMVH 226 (322)
T ss_dssp HHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEESCCCSSSCCHHHHHHTHHHHSCGGGCCEEEEEEEE
T ss_pred hhhhcccCcccccHHHHHHHHHHHHHHHHHhcCCcEEEEcCCceECCCCCCCCCchHHHHHHHHhCCCccCcCCCcCEEE
Confidence 01112 269999999998875 379999999999999996431100000 00000000 115899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
++|+|++++.+++++. ..+ .|| +++...++.++.+++.+.++
T Consensus 227 v~Dva~a~~~~~~~~~-~~g-~~~-~~~~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 227 VDDVARAHIYLLENSV-PGG-RYN-CSPFIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp HHHHHHHHHHHHHSCC-CCE-EEE-CCCEEEEHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHhhCcC-CCC-CEE-EcCCCCCHHHHHHHHHHhCC
Confidence 9999999999998754 333 588 55666889999999988764
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2e-29 Score=247.67 Aligned_cols=225 Identities=16% Similarity=0.082 Sum_probs=170.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh----HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++|+|||||||||||++|+++|+++|++|++++|+... ...+ . ......+++++.+|+.
T Consensus 6 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~---------~------~~~~~~~~~~~~~Dl~-- 68 (321)
T 3vps_A 6 LKHRILITGGAGFIGGHLARALVASGEEVTVLDDLRVPPMIPPEGT---------G------KFLEKPVLELEERDLS-- 68 (321)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSSCCSSCCTTS---------S------EEECSCGGGCCHHHHT--
T ss_pred CCCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcccccchhhh---------h------hhccCCCeeEEeCccc--
Confidence 46899999999999999999999999999999998751 1100 0 0001134555555554
Q ss_pred hcHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhhch
Q 013273 155 VQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
++|+||||||.... ...++...++ |+.++.+++++|++++++||||+||.+++... .++.+..+
T Consensus 69 --------~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~~~v~~~v~~SS~~v~~~~~~~~~~E~~~~~p 139 (321)
T 3vps_A 69 --------DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTSVGVPKVVVGSTCEVYGQADTLPTPEDSPLSP 139 (321)
T ss_dssp --------TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCSSSSBCTTSCCCC
T ss_pred --------cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHHcCCCeEEEecCHHHhCCCCCCCCCCCCCCCC
Confidence 79999999996542 2344556677 99999999999999999999999998774322 23344566
Q ss_pred hhHHHHHHHHHHHHHHh----CCC-CEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHHH
Q 013273 228 FWGVLLWKRKAEEALIA----SGL-PYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~----~gl-~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.+.|+.+|+.+|.+++. .|+ +++++||+++||++.... ....+.+.........++|++|+|++
T Consensus 140 ~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~ 219 (321)
T 3vps_A 140 RSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERPDALVPRLCANLLTRNELPVEGDGEQRRDFTYITDVVDK 219 (321)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCTTSHHHHHHHHHHHHSEEEEETTSCCEECEEEHHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCCCChHHHHHHHHHcCCCeEEeCCCCceEceEEHHHHHHH
Confidence 78899999999999875 689 999999999999975421 01112222223344578999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++.++.++. . + +|||+++...++.++.+++. .+|....
T Consensus 220 ~~~~~~~~~-~-g-~~~i~~~~~~s~~e~~~~i~-~~g~~~~ 257 (321)
T 3vps_A 220 LVALANRPL-P-S-VVNFGSGQSLSVNDVIRILQ-ATSPAAE 257 (321)
T ss_dssp HHHGGGSCC-C-S-EEEESCSCCEEHHHHHHHHH-TTCTTCE
T ss_pred HHHHHhcCC-C-C-eEEecCCCcccHHHHHHHHH-HhCCCCc
Confidence 999999886 2 5 99999999999999999999 8887654
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.96 E-value=9.8e-29 Score=259.76 Aligned_cols=242 Identities=16% Similarity=0.136 Sum_probs=177.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH---HHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN---LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~---l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
..+|+|||||||||||++|+++|++.|++|++++|+...... +.+.++....... ......+++++.+|+.|.
T Consensus 148 ~~~~~VLVTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~----~~~~~~~v~~v~~Dl~d~ 223 (508)
T 4f6l_B 148 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEET----VEMMLSNIEVIVGDFECM 223 (508)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHH----HHHHSTTEEEEEEBTTBC
T ss_pred CCCCeEEEECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhccccc----chhccCceEEEecCCccc
Confidence 456799999999999999999999999999999999874433 2222222100000 000126899999999998
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC---------Cchhh-
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI- 224 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~---------~~~~~- 224 (446)
+.+. ++.++|+||||||... ...++...+++|+.++.+++++|++ ++++|||+||.++..+. .+++.
T Consensus 224 ~~l~-~~~~~D~Vih~Aa~~~-~~~~~~~~~~~Nv~gt~~ll~~a~~-~~~~~v~iSS~~vG~~~~~~~~~~~~~E~~~~ 300 (508)
T 4f6l_B 224 DDVV-LPENMDTIIHAGARTD-HFGDDDEFEKVNVQGTVDVIRLAQQ-HHARLIYVSTISVGTYFDIDTEDVTFSEADVY 300 (508)
T ss_dssp SSCC-CSSCCSEEEECCCC---------CCHHHHHHHHHHHHHHHHT-TTCEEEEEEESCTTSEECTTCSCCEECTTCSC
T ss_pred ccCC-CccCCCEEEECCceec-CCCCHHHHhhhHHHHHHHHHHHHHh-CCCcEEEeCChhhccCCccCCcCccccccccc
Confidence 8888 7789999999999754 2345677789999999999999998 67899999998871110 11111
Q ss_pred --hchhhHHHHHHHHHHHHHHh---CCCCEEEEecCCccCCCcccccccc----------------eeecc-cCcccCCc
Q 013273 225 --LNLFWGVLLWKRKAEEALIA---SGLPYTIVRPGGMERPTDAYKETHN----------------ITLSQ-EDTLFGGQ 282 (446)
Q Consensus 225 --~~~~~~Y~~sK~~~E~~l~~---~gl~~tivRPg~v~gp~~~~~~~~~----------------~~~~~-~~~~~~~~ 282 (446)
..+.+.|+.+|+.+|+++++ .|++++|+|||+|||+........+ ..+.. .......+
T Consensus 301 ~~~~~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~~~~~~ 380 (508)
T 4f6l_B 301 KGQLLTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRWHMRNIKTNRFSMVMNDLLQLDCIGVSMAEMPVDF 380 (508)
T ss_dssp SSBCCCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSSCCCCTTCTTCHHHHHHHHHTTCSEEETTGGGSEEEC
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCCCcccCCcchHHHHHHHHHHHHcCCCCCCccCceEEE
Confidence 23667899999999999875 8999999999999999643210000 00111 11233468
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
++++|+|++++.++.++. .+++||++++..+++.++.+++.+..
T Consensus 381 v~v~DvA~ai~~~~~~~~--~~~~~nl~~~~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 381 SFVDTTARQIVALAQVNT--PQIIYHVLSPNKMPVKSLLECVKRKE 424 (508)
T ss_dssp EEHHHHHHHHHHHTTBCC--SCSEEEESCSCEEEHHHHHHHHHSSC
T ss_pred EcHHHHHHHHHHHHhCCC--CCCEEEeCCCCCCCHHHHHHHHHHcC
Confidence 999999999999998875 68999999999999999999998865
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.96 E-value=6e-29 Score=241.72 Aligned_cols=215 Identities=17% Similarity=0.177 Sum_probs=169.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|||||||||||++|++.|++. |++|++++|++++...+ ...+++++.+|+.|.+++.+
T Consensus 1 M~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-------------------~~~~v~~~~~D~~d~~~l~~ 61 (289)
T 3e48_A 1 MNIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-------------------WRGKVSVRQLDYFNQESMVE 61 (289)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-------------------GBTTBEEEECCTTCHHHHHH
T ss_pred CEEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-------------------hhCCCEEEEcCCCCHHHHHH
Confidence 47999999999999999999998 99999999998764322 12679999999999999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAE 239 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E 239 (446)
+++++|+||||||.... ...|+.++.+++++|++++++||||+||.+..... + ..+...+..+|
T Consensus 62 ~~~~~d~vi~~a~~~~~--------~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~~~~~-------~-~~~~~~~~~~e 125 (289)
T 3e48_A 62 AFKGMDTVVFIPSIIHP--------SFKRIPEVENLVYAAKQSGVAHIIFIGYYADQHNN-------P-FHMSPYFGYAS 125 (289)
T ss_dssp HTTTCSEEEECCCCCCS--------HHHHHHHHHHHHHHHHHTTCCEEEEEEESCCSTTC-------C-STTHHHHHHHH
T ss_pred HHhCCCEEEEeCCCCcc--------chhhHHHHHHHHHHHHHcCCCEEEEEcccCCCCCC-------C-CccchhHHHHH
Confidence 99999999999986432 23489999999999999999999999997642211 1 11233445778
Q ss_pred HHHHhCCCCEEEEecCCccCCCccccc----ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 240 EALIASGLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 240 ~~l~~~gl~~tivRPg~v~gp~~~~~~----~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
..+++.|+++++||||++||+...+.. ....... .......+++++|+|++++.++.++. ..+++||+. +...
T Consensus 126 ~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~i~~~Dva~~~~~~l~~~~-~~g~~~~~~-~~~~ 202 (289)
T 3e48_A 126 RLLSTSGIDYTYVRMAMYMDPLKPYLPELMNMHKLIYP-AGDGRINYITRNDIARGVIAIIKNPD-TWGKRYLLS-GYSY 202 (289)
T ss_dssp HHHHHHCCEEEEEEECEESTTHHHHHHHHHHHTEECCC-CTTCEEEEECHHHHHHHHHHHHHCGG-GTTCEEEEC-CEEE
T ss_pred HHHHHcCCCEEEEeccccccccHHHHHHHHHCCCEecC-CCCceeeeEEHHHHHHHHHHHHcCCC-cCCceEEeC-CCcC
Confidence 888889999999999999998432211 1111111 12233458999999999999999876 448899999 8889
Q ss_pred ChhhHHHHHHhccCCCCC
Q 013273 316 PLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 316 t~~~i~e~l~~i~~~~~~ 333 (446)
++.++.+++.+++|+...
T Consensus 203 s~~e~~~~~~~~~g~~~~ 220 (289)
T 3e48_A 203 DMKELAAILSEASGTEIK 220 (289)
T ss_dssp EHHHHHHHHHHHHTSCCE
T ss_pred CHHHHHHHHHHHHCCcee
Confidence 999999999999998654
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.5e-28 Score=247.04 Aligned_cols=239 Identities=14% Similarity=0.006 Sum_probs=176.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH--HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
||+||||||+||||++|+++|+++|++|++++|+.+.. ..+. .+... ......+++++.+|++|.+++
T Consensus 1 m~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~---------~~~~~~~~~~~~~Dl~d~~~~ 70 (372)
T 1db3_A 1 SKVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVD-HIYQD---------PHTCNPKFHLHYGDLSDTSNL 70 (372)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECC-------------------------------CCEEECCCCSSCHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccchHHHH-HHhhc---------cccCCCceEEEECCCCCHHHH
Confidence 47899999999999999999999999999999986542 1111 11000 000115789999999999999
Q ss_pred HHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCC---CEEEEEccccccCCC-----Cchhhh
Q 013273 158 EPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKFG-----FPAAIL 225 (446)
Q Consensus 158 ~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v---~r~V~vSS~~~~~~~-----~~~~~~ 225 (446)
.+++.+ +|+||||||.... ...++...+++|+.++.+++++|++.++ ++||++||.+++... .++.+.
T Consensus 71 ~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~iv~~SS~~v~g~~~~~~~~E~~~~ 150 (372)
T 1db3_A 71 TRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPF 150 (372)
T ss_dssp HHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTSCC
T ss_pred HHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEeCChhhhCCCCCCCCCccCCC
Confidence 999875 7999999996432 2233445678999999999999999987 899999998774321 223344
Q ss_pred chhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------cc-ceeecccCcccCCccCHH
Q 013273 226 NLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~~-~~~~~~~~~~~~~~v~~~ 286 (446)
.+...|+.+|+.+|.+++. .|++++++|++++|||+..... .. .............++|++
T Consensus 151 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~ 230 (372)
T 1db3_A 151 YPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAK 230 (372)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHH
T ss_pred CCCChHHHHHHHHHHHHHHHHHHhCCCeEEEEECCccCCCCCCcchhhHHHHHHHHHHcCCCCceeecCCCceeeeeEHH
Confidence 5677899999999998863 5999999999999998642110 00 011111223344789999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
|+|++++.+++++. +++||++++...++.++.+++.+++|..
T Consensus 231 Dva~a~~~~~~~~~---~~~~ni~~~~~~s~~e~~~~i~~~~g~~ 272 (372)
T 1db3_A 231 DYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIK 272 (372)
T ss_dssp HHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEE
T ss_pred HHHHHHHHHHhcCC---CceEEEcCCCceeHHHHHHHHHHHhCCC
Confidence 99999999998764 5899999999999999999999999864
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.96 E-value=7.2e-29 Score=242.49 Aligned_cols=226 Identities=19% Similarity=0.159 Sum_probs=174.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+|+|||||||||||+++++.|+++| ++|++++|++++... +.+.. .+++++.+|+.|.+++
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~--~~l~~---------------~~~~~~~~D~~d~~~l 66 (299)
T 2wm3_A 4 DKKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA--KELRL---------------QGAEVVQGDQDDQVIM 66 (299)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH--HHHHH---------------TTCEEEECCTTCHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH--HHHHH---------------CCCEEEEecCCCHHHH
Confidence 35799999999999999999999999 999999999765421 11111 4689999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
.++++++|+||||+|..... ..+.|+.++.+++++|++.+++|||++|+.+++.... ..+...|+.+|..
T Consensus 67 ~~~~~~~d~vi~~a~~~~~~------~~~~~~~~~~~~~~aa~~~gv~~iv~~S~~~~~~~~~----~~~~~~y~~sK~~ 136 (299)
T 2wm3_A 67 ELALNGAYATFIVTNYWESC------SQEQEVKQGKLLADLARRLGLHYVVYSGLENIKKLTA----GRLAAAHFDGKGE 136 (299)
T ss_dssp HHHHTTCSEEEECCCHHHHT------CHHHHHHHHHHHHHHHHHHTCSEEEECCCCCHHHHTT----TSCCCHHHHHHHH
T ss_pred HHHHhcCCEEEEeCCCCccc------cchHHHHHHHHHHHHHHHcCCCEEEEEcCccccccCC----CcccCchhhHHHH
Confidence 99999999999999853211 2356889999999999999999999988766532110 0123569999999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCccc-cc----cc---ceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAY-KE----TH---NITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~-~~----~~---~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
+|++++++|+++++||||++||+.... .. .. .+.+.. ......++|++|+|++++.++.++....+++||+
T Consensus 137 ~e~~~~~~gi~~~ilrp~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~i~~~Dva~~~~~~l~~~~~~~g~~~~~ 215 (299)
T 2wm3_A 137 VEEYFRDIGVPMTSVRLPCYFENLLSHFLPQKAPDGKSYLLSLPT-GDVPMDGMSVSDLGPVVLSLLKMPEKYVGQNIGL 215 (299)
T ss_dssp HHHHHHHHTCCEEEEECCEEGGGGGTTTCCEECTTSSSEEECCCC-TTSCEEEECGGGHHHHHHHHHHSHHHHTTCEEEC
T ss_pred HHHHHHHCCCCEEEEeecHHhhhchhhcCCcccCCCCEEEEEecC-CCCccceecHHHHHHHHHHHHcChhhhCCeEEEe
Confidence 999999999999999999999974321 10 11 011111 2223368999999999999998753235789999
Q ss_pred ecCCCCChhhHHHHHHhccCCCCC
Q 013273 310 IAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 310 ~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+ ...++.++.+++.+++|+...
T Consensus 216 ~g-~~~s~~e~~~~~~~~~g~~~~ 238 (299)
T 2wm3_A 216 ST-CRHTAEEYAALLTKHTRKVVH 238 (299)
T ss_dssp CS-EEECHHHHHHHHHHHHSSCEE
T ss_pred ee-ccCCHHHHHHHHHHHHCCCce
Confidence 87 468999999999999998653
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.96 E-value=1.1e-29 Score=235.55 Aligned_cols=198 Identities=21% Similarity=0.203 Sum_probs=160.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++|+|+||||+||||+++++.|+++|+ +|++++|++.+ ...+++++.+|+.|.++
T Consensus 4 ~~~~vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-----------------------~~~~~~~~~~D~~~~~~ 60 (215)
T 2a35_A 4 TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------------EHPRLDNPVGPLAELLP 60 (215)
T ss_dssp CCCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------------CCTTEECCBSCHHHHGG
T ss_pred CCceEEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-----------------------cCCCceEEeccccCHHH
Confidence 357999999999999999999999998 99999998754 01578899999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 236 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (446)
+.+++ +|+||||||.......++...+++|+.++.++++++++.+++|||++||.++.. .+...|+.+|+
T Consensus 61 ~~~~~--~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~~~~--------~~~~~y~~sK~ 130 (215)
T 2a35_A 61 QLDGS--IDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADA--------KSSIFYNRVKG 130 (215)
T ss_dssp GCCSC--CSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCT--------TCSSHHHHHHH
T ss_pred HHHhh--hcEEEECeeeccccCCCHHHHHHhhHHHHHHHHHHHHHcCCCEEEEECCcccCC--------CCccHHHHHHH
Confidence 98888 999999999754434455667889999999999999999999999999988743 23457999999
Q ss_pred HHHHHHHhCCCC-EEEEecCCccCCCccccccccee---ecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNIT---LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 237 ~~E~~l~~~gl~-~tivRPg~v~gp~~~~~~~~~~~---~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
.+|++++..|++ +++||||++||+.........+. ...... ...++|++|+|++++.+++++. +++||+.++
T Consensus 131 ~~e~~~~~~~~~~~~~vrp~~v~g~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~Dva~~~~~~~~~~~---~~~~~i~~~ 206 (215)
T 2a35_A 131 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPG-KYHGIEACDLARALWRLALEEG---KGVRFVESD 206 (215)
T ss_dssp HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----C-HHHHHHHHHHHHHHHHHHTCCC---SEEEEEEHH
T ss_pred HHHHHHHHcCCCeEEEEeCceeeCCCCcchHHHHHHHhhhhccCC-CcCcEeHHHHHHHHHHHHhcCC---CCceEEcHH
Confidence 999999999999 99999999999965321111100 000001 2357999999999999999875 789999986
Q ss_pred C
Q 013273 313 T 313 (446)
Q Consensus 313 ~ 313 (446)
+
T Consensus 207 ~ 207 (215)
T 2a35_A 207 E 207 (215)
T ss_dssp H
T ss_pred H
Confidence 4
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.96 E-value=4.9e-29 Score=243.15 Aligned_cols=218 Identities=11% Similarity=0.017 Sum_probs=174.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+ +|++|++++|+.. ++.+|+.|.+++.++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~------------------------------~~~~D~~d~~~~~~~ 49 (299)
T 1n2s_A 1 MNILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK------------------------------EFCGDFSNPKGVAET 49 (299)
T ss_dssp CEEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS------------------------------SSCCCTTCHHHHHHH
T ss_pred CeEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc------------------------------cccccCCCHHHHHHH
Confidence 479999999999999999999 8999999999752 135899999999999
Q ss_pred hcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 161 LGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 161 ~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
+.+ +|+||||||.... ...++...+++|+.++.+++++|++.++ ||||+||.+++... .++.+..+.+.|
T Consensus 50 ~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~-~~v~~SS~~vy~~~~~~~~~E~~~~~p~~~Y 128 (299)
T 1n2s_A 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY 128 (299)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred HHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEecccEEeCCCCCCCCCCCCCCCccHH
Confidence 976 9999999996542 2345556788999999999999999887 89999998774321 223345567789
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcc-ccc--------ccceeecccCcccCCccCHHHHHHHHHHHHhCCC-C
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDA-YKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-L 301 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~-~~~--------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~ 301 (446)
+.+|+.+|++++..+.+++++||+++||+++. +.. ...+.+. +.....++|++|+|++++.+++++. .
T Consensus 129 ~~sK~~~E~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~Dva~~~~~~~~~~~~~ 206 (299)
T 1n2s_A 129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVI--NDQYGAPTGAELLADCTAHAIRVALNK 206 (299)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEE--CSCEECCEEHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhCCCeEEEeeeeecCCCcCcHHHHHHHHHhcCCCEEee--cCcccCCeeHHHHHHHHHHHHHHhccc
Confidence 99999999999987789999999999999653 100 1111111 1234578999999999999998752 1
Q ss_pred C-CCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 302 S-YCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 302 ~-~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
. .+++||++++...++.++.+.+.+++|...
T Consensus 207 ~~~~~~~~i~~~~~~s~~e~~~~i~~~~g~~~ 238 (299)
T 1n2s_A 207 PEVAGLYHLVAGGTTTWHDYAALVFDEARKAG 238 (299)
T ss_dssp GGGCEEEECCCBSCEEHHHHHHHHHHHHHHHT
T ss_pred cccCceEEEeCCCCCCHHHHHHHHHHHhCCCc
Confidence 2 478999999998999999999999988653
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=1.6e-28 Score=248.15 Aligned_cols=235 Identities=12% Similarity=-0.011 Sum_probs=178.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-----HHHHHHHHHHhhhcccccccCCCCCC-ceEEEEcCCCCh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVE-MLELVECDLEKR 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-----~~~l~~~~~~~~l~~~~~~~g~~~~~-~v~~v~~Dl~d~ 154 (446)
++||||||+||||++|++.|+++|++|++++|+..+ ...+...+. .... +++++.+|++|.
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~Dl~d~ 95 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH-------------NVNKALMKLHYADLTDA 95 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC---------------------CCEEEEECCTTCH
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCccccchhhhhhhhccc-------------cccccceEEEECCCCCH
Confidence 689999999999999999999999999999998653 111100000 0012 789999999999
Q ss_pred hcHHHHhcC--CCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCC-----EEEEEccccccCCC----Cc
Q 013273 155 VQIEPALGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVN-----HFIMVSSLGTNKFG----FP 221 (446)
Q Consensus 155 ~~~~~a~~~--~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~-----r~V~vSS~~~~~~~----~~ 221 (446)
+++.+++.+ +|+||||||..... ..++...+++|+.++.+++++|++.+++ +|||+||.+++... .+
T Consensus 96 ~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~~~~~~~~~~~v~~SS~~vyg~~~~~~~E 175 (381)
T 1n7h_A 96 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE 175 (381)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHhCCccCCccEEEEeCcHHHhCCCCCCCCC
Confidence 999999875 69999999965421 2345567889999999999999887665 99999998774321 22
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc--------------cc-ceeecccCcccCCc
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE--------------TH-NITLSQEDTLFGGQ 282 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~--------------~~-~~~~~~~~~~~~~~ 282 (446)
+.+..+...|+.+|+.+|.+++. .|++++++|++++|||+..... .. .............+
T Consensus 176 ~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~r~~~~~gp~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 255 (381)
T 1n7h_A 176 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 255 (381)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHhCCcEEEEEeCceeCCCCCCcchhHHHHHHHHHHHcCCCCeEEeCCCCceeee
Confidence 33445677899999999998874 5899999999999999642110 00 00111112234468
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
+|++|+|++++.+++++. +++||++++...++.++.+++.+++|..
T Consensus 256 v~v~Dva~a~~~~~~~~~---~~~~~i~~~~~~s~~e~~~~i~~~~g~~ 301 (381)
T 1n7h_A 256 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLN 301 (381)
T ss_dssp EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCC
T ss_pred EEHHHHHHHHHHHHhCCC---CCeEEeeCCCCCcHHHHHHHHHHHcCCC
Confidence 999999999999998765 5899999999899999999999999864
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.5e-27 Score=220.59 Aligned_cols=199 Identities=19% Similarity=0.147 Sum_probs=156.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~-~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++||||||+|+||+++++.|+ +.|++|++++|+++ +...+.. ...+++++.+|++|.+++
T Consensus 5 mk~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~-----------------~~~~~~~~~~D~~d~~~~ 67 (221)
T 3r6d_A 5 YXYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII-----------------DHERVTVIEGSFQNPGXL 67 (221)
T ss_dssp CSEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH-----------------TSTTEEEEECCTTCHHHH
T ss_pred EEEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc-----------------CCCceEEEECCCCCHHHH
Confidence 4579999999999999999999 89999999999987 5544321 116799999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchh---hhchhh-HHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA---ILNLFW-GVLL 233 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~---~~~~~~-~Y~~ 233 (446)
.++++++|+||||||.. |+. +.++++++++.+++|||++||.++........ ...... .|+.
T Consensus 68 ~~~~~~~d~vv~~ag~~-------------n~~-~~~~~~~~~~~~~~~iv~iSs~~~~~~~~~~~~~~~~~~~~~~y~~ 133 (221)
T 3r6d_A 68 EQAVTNAEVVFVGAMES-------------GSD-MASIVKALSRXNIRRVIGVSMAGLSGEFPVALEKWTFDNLPISYVQ 133 (221)
T ss_dssp HHHHTTCSEEEESCCCC-------------HHH-HHHHHHHHHHTTCCEEEEEEETTTTSCSCHHHHHHHHHTSCHHHHH
T ss_pred HHHHcCCCEEEEcCCCC-------------Chh-HHHHHHHHHhcCCCeEEEEeeceecCCCCcccccccccccccHHHH
Confidence 99999999999999853 555 99999999999999999999988744221110 011112 7999
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecc-cCcccCCccCHHHHHHHHHHHH--hCCCCCCCcEEEEe
Q 013273 234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQ-EDTLFGGQVSNLQVAELLACMA--KNRSLSYCKVVEVI 310 (446)
Q Consensus 234 sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~-~~~~~~~~v~~~DvA~ai~~ll--~~~~~~~~~v~ni~ 310 (446)
+|..+|.++++.|+++++||||+++++... ..+.... .....+.+++++|||+++++++ .++....++.+.+.
T Consensus 134 ~K~~~e~~~~~~~i~~~~vrpg~v~~~~~~----~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~~~~~~~~~i~ 209 (221)
T 3r6d_A 134 GERQARNVLRESNLNYTILRLTWLYNDPEX----TDYELIPEGAQFNDAQVSREAVVKAIFDILHAADETPFHRTSIGVG 209 (221)
T ss_dssp HHHHHHHHHHHSCSEEEEEEECEEECCTTC----CCCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCGGGTTEEEEEE
T ss_pred HHHHHHHHHHhCCCCEEEEechhhcCCCCC----cceeeccCCccCCCceeeHHHHHHHHHHHHHhcChhhhhcceeeec
Confidence 999999999999999999999999987221 1111211 2222345899999999999999 87765568888888
Q ss_pred cCC
Q 013273 311 AET 313 (446)
Q Consensus 311 ~~~ 313 (446)
++.
T Consensus 210 ~~~ 212 (221)
T 3r6d_A 210 EPG 212 (221)
T ss_dssp CTT
T ss_pred CCC
Confidence 765
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-28 Score=237.35 Aligned_cols=214 Identities=18% Similarity=0.056 Sum_probs=170.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|||||||||||++|+++|+++|++|++++|+..+.. ..+++++.+|++|.+++.+
T Consensus 2 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----------------------~~~~~~~~~Dl~d~~~~~~ 59 (267)
T 3ay3_A 2 LNRLLVTGAAGGVGSAIRPHLGTLAHEVRLSDIVDLGAA----------------------EAHEEIVACDLADAQAVHD 59 (267)
T ss_dssp EEEEEEESTTSHHHHHHGGGGGGTEEEEEECCSSCCCCC----------------------CTTEEECCCCTTCHHHHHH
T ss_pred CceEEEECCCCHHHHHHHHHHHhCCCEEEEEeCCCcccc----------------------CCCccEEEccCCCHHHHHH
Confidence 358999999999999999999999999999999875310 1467899999999999999
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------CchhhhchhhHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWGVLL 233 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~~~~~Y~~ 233 (446)
+++++|+||||||... ..++...+++|+.++.++++++++.+++||||+||..++... .++.+..+...|+.
T Consensus 60 ~~~~~d~vi~~a~~~~--~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~~~~~~~~~~~~E~~~~~~~~~Y~~ 137 (267)
T 3ay3_A 60 LVKDCDGIIHLGGVSV--ERPWNDILQANIIGAYNLYEAARNLGKPRIVFASSNHTIGYYPRTTRIDTEVPRRPDSLYGL 137 (267)
T ss_dssp HHTTCSEEEECCSCCS--CCCHHHHHHHTHHHHHHHHHHHHHTTCCEEEEEEEGGGSTTSBTTSCBCTTSCCCCCSHHHH
T ss_pred HHcCCCEEEECCcCCC--CCCHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCHHHhCCCCCCCCCCCCCCCCCCChHHH
Confidence 9999999999999752 234455678999999999999999999999999998764321 12233456678999
Q ss_pred HHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 234 WKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 234 sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
+|+.+|.+++ +.|+++++|||+++|+... .......++|++|+|++++.++.++. ..+++|++
T Consensus 138 sK~~~e~~~~~~~~~~gi~~~~lrp~~v~~~~~------------~~~~~~~~~~~~dva~~~~~~~~~~~-~~~~~~~~ 204 (267)
T 3ay3_A 138 SKCFGEDLASLYYHKFDIETLNIRIGSCFPKPK------------DARMMATWLSVDDFMRLMKRAFVAPK-LGCTVVYG 204 (267)
T ss_dssp HHHHHHHHHHHHHHTTCCCEEEEEECBCSSSCC------------SHHHHHHBCCHHHHHHHHHHHHHSSC-CCEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeceeecCCCC------------CCCeeeccccHHHHHHHHHHHHhCCC-CCceeEec
Confidence 9999999876 3699999999999984210 11123468999999999999999875 34678999
Q ss_pred ecCCCCChhhHHHHHHhccCCCC
Q 013273 310 IAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 310 ~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
.++...++.++.++ +.+|..+
T Consensus 205 ~~~~~~~~~d~~~~--~~lg~~p 225 (267)
T 3ay3_A 205 ASANTESWWDNDKS--AFLGWVP 225 (267)
T ss_dssp CCSCSSCCBCCGGG--GGGCCCC
T ss_pred CCCccccccCHHHH--HHcCCCC
Confidence 88877777777766 5555443
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=2e-28 Score=240.71 Aligned_cols=224 Identities=15% Similarity=0.084 Sum_probs=173.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|||||||||||++|+++|+++ |++|++++|+.... .+++++.+|+.|.+++.+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~------------------------~~~~~~~~D~~d~~~~~~ 56 (317)
T 3ajr_A 1 MILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT------------------------GGIKFITLDVSNRDEIDR 56 (317)
T ss_dssp CEEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC------------------------TTCCEEECCTTCHHHHHH
T ss_pred CEEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc------------------------cCceEEEecCCCHHHHHH
Confidence 4899999999999999999998 89999999976421 246789999999999999
Q ss_pred Hhc--CCCEEEEcccCCCC-ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC------CchhhhchhhH
Q 013273 160 ALG--NASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG------FPAAILNLFWG 230 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~-~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~------~~~~~~~~~~~ 230 (446)
++. ++|+||||||.... ...++...+++|+.++.+++++|++.+++|||++||.+++... .++.+..+.+.
T Consensus 57 ~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~~~~~~~~~~~~~e~~~~~p~~~ 136 (317)
T 3ajr_A 57 AVEKYSIDAIFHLAGILSAKGEKDPALAYKVNMNGTYNILEAAKQHRVEKVVIPSTIGVFGPETPKNKVPSITITRPRTM 136 (317)
T ss_dssp HHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGCCTTSCSSSBCSSSCCCCCSH
T ss_pred HHhhcCCcEEEECCcccCCccccChHHHhhhhhHHHHHHHHHHHHcCCCEEEEecCHHHhCCCCCCCCccccccCCCCch
Confidence 997 89999999986432 1234456688999999999999999999999999998774432 12233456788
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|..+|.+++ +.|+++++|||+++||+...... ...+..........+++|++|+|++
T Consensus 137 Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a 216 (317)
T 3ajr_A 137 FGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTTDYAVEIFYYAVKREKYKCYLAPNRALPMMYMPDALKA 216 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSSTHHHHHHHHHHTTCCEEECSCTTCCEEEEEHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcchhHHHHHHHHHHhCCCceeecCccceeeeeEHHHHHHH
Confidence 9999999998876 36999999999999996421100 0111111122233468999999999
Q ss_pred HHHHHhCCCCC--CCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 292 LACMAKNRSLS--YCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 292 i~~ll~~~~~~--~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
++.+++++... .+++||+++ ...++.++.+++.+.++.
T Consensus 217 ~~~~l~~~~~~~~~g~~~~i~~-~~~s~~e~~~~i~~~~~~ 256 (317)
T 3ajr_A 217 LVDLYEADRDKLVLRNGYNVTA-YTFTPSELYSKIKERIPE 256 (317)
T ss_dssp HHHHHHCCGGGCSSCSCEECCS-EEECHHHHHHHHHTTCCS
T ss_pred HHHHHhCCccccccCceEecCC-ccccHHHHHHHHHHHCCc
Confidence 99999876421 358999987 467899999999998873
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=5.2e-28 Score=237.36 Aligned_cols=226 Identities=18% Similarity=0.207 Sum_probs=169.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-----hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-----~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+|+|+|||||||||+++++.|+++|++|++++|+.+ +...+ +.+. ..+++++.+|+.|.
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~-~~~~---------------~~~~~~~~~D~~d~ 67 (313)
T 1qyd_A 4 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQML-LYFK---------------QLGAKLIEASLDDH 67 (313)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHH-HHHH---------------TTTCEEECCCSSCH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHH-HHHH---------------hCCeEEEeCCCCCH
Confidence 578999999999999999999999999999999853 22221 1111 15789999999999
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhch-hhHHH
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVL 232 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~-~~~Y~ 232 (446)
+++.++++++|+|||++|.... ..|+.++.+++++|+++| ++|||+ |+.+..... ......+ ...|
T Consensus 68 ~~l~~~~~~~d~vi~~a~~~~~---------~~~~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~~-~~~~~~p~~~~y- 135 (313)
T 1qyd_A 68 QRLVDALKQVDVVISALAGGVL---------SHHILEQLKLVEAIKEAGNIKRFLP-SEFGMDPDI-MEHALQPGSITF- 135 (313)
T ss_dssp HHHHHHHTTCSEEEECCCCSSS---------STTTTTHHHHHHHHHHSCCCSEEEC-SCCSSCTTS-CCCCCSSTTHHH-
T ss_pred HHHHHHHhCCCEEEECCccccc---------hhhHHHHHHHHHHHHhcCCCceEEe-cCCcCCccc-cccCCCCCcchH-
Confidence 9999999999999999986432 126778999999999998 999986 655532211 0111122 3457
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCccCCCcccc-c--------ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCC
Q 013273 233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-E--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303 (446)
Q Consensus 233 ~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~-~--------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~ 303 (446)
.+|..+|+++++.|+++++|||++++++..... . ...+.+.........+++++|+|++++.++.++. ..
T Consensus 136 ~sK~~~e~~~~~~g~~~~ilrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~-~~ 214 (313)
T 1qyd_A 136 IDKRKVRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TL 214 (313)
T ss_dssp HHHHHHHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GS
T ss_pred HHHHHHHHHHHhcCCCeEEEEeceeccccccccccccccccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCcc-cC
Confidence 999999999999999999999999987421110 0 0111111122233468999999999999998875 45
Q ss_pred CcEEEEecC-CCCChhhHHHHHHhccCCCCCC
Q 013273 304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 304 ~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
+++|++.++ ...++.++.+++.+++|+....
T Consensus 215 ~~~~~~~g~~~~~s~~e~~~~~~~~~g~~~~~ 246 (313)
T 1qyd_A 215 NKTMYIRPPMNILSQKEVIQIWERLSEQNLDK 246 (313)
T ss_dssp SSEEECCCGGGEEEHHHHHHHHHHHHTCCCEE
T ss_pred CceEEEeCCCCccCHHHHHHHHHHhcCCCCce
Confidence 788888865 6789999999999999987543
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.95 E-value=2.9e-27 Score=223.80 Aligned_cols=202 Identities=18% Similarity=0.161 Sum_probs=150.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+|+||||||+||||++|++.|+++| ++|++++|++++...+ ...+++++.+|++|.++
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-------------------~~~~~~~~~~Dl~d~~~ 81 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-------------------YPTNSQIIMGDVLNHAA 81 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-------------------CCTTEEEEECCTTCHHH
T ss_pred CcccEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-------------------ccCCcEEEEecCCCHHH
Confidence 346789999999999999999999999 9999999998754321 12579999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch---hhhchhhHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLL 233 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~---~~~~~~~~Y~~ 233 (446)
++++++++|+||||+|... ....+.++++++++.+++|||++||.+++...... ........+..
T Consensus 82 ~~~~~~~~D~vv~~a~~~~------------~~~~~~~~~~~~~~~~~~~iV~iSS~~~~~~~~~~~~~~~~~~~~~~~~ 149 (236)
T 3qvo_A 82 LKQAMQGQDIVYANLTGED------------LDIQANSVIAAMKACDVKRLIFVLSLGIYDEVPGKFVEWNNAVIGEPLK 149 (236)
T ss_dssp HHHHHTTCSEEEEECCSTT------------HHHHHHHHHHHHHHTTCCEEEEECCCCC----------------CGGGH
T ss_pred HHHHhcCCCEEEEcCCCCc------------hhHHHHHHHHHHHHcCCCEEEEEecceecCCCCcccccchhhcccchHH
Confidence 9999999999999998522 12457799999999999999999998774321110 00001112334
Q ss_pred HHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 234 WKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 234 sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
.+..+|+.++..|+++++||||+++++.... ...........+.+++++|||+++++++.++....+++|+|.++.
T Consensus 150 ~~~~~~~~l~~~gi~~~~vrPg~i~~~~~~~----~~~~~~~~~~~~~~i~~~DvA~~i~~ll~~~~~~~g~~~~i~~~~ 225 (236)
T 3qvo_A 150 PFRRAADAIEASGLEYTILRPAWLTDEDIID----YELTSRNEPFKGTIVSRKSVAALITDIIDKPEKHIGENIGINQPG 225 (236)
T ss_dssp HHHHHHHHHHTSCSEEEEEEECEEECCSCCC----CEEECTTSCCSCSEEEHHHHHHHHHHHHHSTTTTTTEEEEEECSS
T ss_pred HHHHHHHHHHHCCCCEEEEeCCcccCCCCcc----eEEeccCCCCCCcEECHHHHHHHHHHHHcCcccccCeeEEecCCC
Confidence 4566678888899999999999999874211 111222223345679999999999999999875579999999986
Q ss_pred C
Q 013273 314 T 314 (446)
Q Consensus 314 ~ 314 (446)
.
T Consensus 226 ~ 226 (236)
T 3qvo_A 226 T 226 (236)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.95 E-value=1.1e-27 Score=238.12 Aligned_cols=235 Identities=17% Similarity=0.086 Sum_probs=177.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-------~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
+.+|+||||||+||||++|+++|+++| ++|++++|+...... ....+++++.+|
T Consensus 12 ~~~~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~-------------------~~~~~~~~~~~D 72 (342)
T 2hrz_A 12 FQGMHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPA-------------------GFSGAVDARAAD 72 (342)
T ss_dssp CSCEEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCT-------------------TCCSEEEEEECC
T ss_pred ccCCEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCcccc-------------------ccCCceeEEEcC
Confidence 456799999999999999999999999 899999998643210 012578999999
Q ss_pred CCChhcHHHHh-cCCCEEEEcccCCCC-ccCCCCCcccchHHHHHHHHHHHHhCC-----CCEEEEEccccccCCC----
Q 013273 151 LEKRVQIEPAL-GNASVVICCIGASEK-EVFDITGPYRIDFQATKNLVDAATIAK-----VNHFIMVSSLGTNKFG---- 219 (446)
Q Consensus 151 l~d~~~~~~a~-~~~D~VI~~Ag~~~~-~~~~~~~~~~vNv~g~~~l~~aa~~~~-----v~r~V~vSS~~~~~~~---- 219 (446)
++|.+++.+++ .++|+||||||.... ...++...+++|+.++.+++++|++.+ +++||++||.+++...
T Consensus 73 l~d~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~ 152 (342)
T 2hrz_A 73 LSAPGEAEKLVEARPDVIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYP 152 (342)
T ss_dssp TTSTTHHHHHHHTCCSEEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSS
T ss_pred CCCHHHHHHHHhcCCCEEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCC
Confidence 99999999999 589999999996532 223455668899999999999998876 7899999998774321
Q ss_pred -CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccC-CCcccccc--------------cceeecccCccc
Q 013273 220 -FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMER-PTDAYKET--------------HNITLSQEDTLF 279 (446)
Q Consensus 220 -~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~g-p~~~~~~~--------------~~~~~~~~~~~~ 279 (446)
.++.+..+...|+.+|+.+|.++++ .+++++++|+.++|| |+...... ....+.......
T Consensus 153 ~~E~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~pg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (342)
T 2hrz_A 153 IPDEFHTTPLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIRPGKPNAAASGFFSNILREPLVGQEAVLPVPESIR 232 (342)
T ss_dssp BCTTCCCCCSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTCCSSCCCSGGGHHHHHHHHHHTTCCEEECSCTTCE
T ss_pred cCCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEecCCCCcchhHHHHHHHHHHHhcCCCeeccCCCccc
Confidence 2233344677899999999998864 479999999999998 65421100 000111111122
Q ss_pred CCccCHHHHHHHHHHHHhCCCC--CCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 280 GGQVSNLQVAELLACMAKNRSL--SYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~--~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
..++|++|+|++++.+++.+.. ..+++||+.+ ...++.++.+++.++++...
T Consensus 233 ~~~~~v~Dva~~~~~~~~~~~~~~~~~~~~ni~g-~~~s~~e~~~~i~~~~g~~~ 286 (342)
T 2hrz_A 233 HWHASPRSAVGFLIHGAMIDVEKVGPRRNLSMPG-LSATVGEQIEALRKVAGEKA 286 (342)
T ss_dssp EEEECHHHHHHHHHHHHHSCHHHHCSCCEEECCC-EEEEHHHHHHHHHHHHCHHH
T ss_pred eeeEehHHHHHHHHHHHhccccccCCccEEEcCC-CCCCHHHHHHHHHHHcCccc
Confidence 2468999999999999987631 1478999964 56899999999999987653
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.95 E-value=1.8e-27 Score=259.36 Aligned_cols=244 Identities=15% Similarity=0.111 Sum_probs=180.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|+||||||+||||++|+++|+++|++|++++|+........+.++.+ . ..+++++.+|+.|.+++
T Consensus 9 ~~~~~ilVTGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--~----------~~~v~~v~~Dl~d~~~l 76 (699)
T 1z45_A 9 STSKIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVL--T----------KHHIPFYEVDLCDRKGL 76 (699)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHH--H----------TSCCCEEECCTTCHHHH
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCcchHHHHHHHhhc--c----------CCceEEEEcCCCCHHHH
Confidence 45689999999999999999999999999999999765332222222211 0 15688999999999999
Q ss_pred HHHhc--CCCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC---------Cchhh
Q 013273 158 EPALG--NASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAI 224 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~---------~~~~~ 224 (446)
.+++. ++|+||||||..... ..+....+++|+.++.+++++|++.+++|||++||.+++... .++.+
T Consensus 77 ~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~~~iV~~SS~~vyg~~~~~~~~~~~~E~~~ 156 (699)
T 1z45_A 77 EKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECP 156 (699)
T ss_dssp HHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSC
T ss_pred HHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECcHHHhCCCccccccCCccccCC
Confidence 99998 899999999965321 123345678999999999999999999999999998774211 12223
Q ss_pred hchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccc--cc------c--------------cceeecc--
Q 013273 225 LNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY--KE------T--------------HNITLSQ-- 274 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~--~~------~--------------~~~~~~~-- 274 (446)
..+...|+.+|+.+|++++. .|++++++||+++||++... .. . ..+.+..
T Consensus 157 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 236 (699)
T 1z45_A 157 LGPTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDD 236 (699)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC---
T ss_pred CCCCChHHHHHHHHHHHHHHHHHhccCCCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCc
Confidence 44667899999999998874 68999999999999974210 00 0 0011100
Q ss_pred ----cCcccCCccCHHHHHHHHHHHHhCC-----CCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 275 ----EDTLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 275 ----~~~~~~~~v~~~DvA~ai~~ll~~~-----~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.......+||++|+|++++.++++. ....+++|||+++...++.++.+++.+++|....
T Consensus 237 ~~~~~g~~~~~~i~v~Dva~a~~~a~~~~~~~~~~~~~~~~yni~~~~~~s~~el~~~i~~~~g~~~~ 304 (699)
T 1z45_A 237 YDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLP 304 (699)
T ss_dssp ---CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCC
T ss_pred ccCCCCCeeEeeEEHHHHHHHHHHHHhhhhccccccCCceEEEECCCCCCcHHHHHHHHHHHhCCCCC
Confidence 1122336899999999999998742 1123679999999999999999999999987643
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.95 E-value=3.8e-28 Score=229.78 Aligned_cols=204 Identities=19% Similarity=0.230 Sum_probs=157.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+|+||||||+||||++++++|+++|+ +|++++|++++...+ ...++.++.+|++|.++
T Consensus 17 ~~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~D~~d~~~ 77 (242)
T 2bka_A 17 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-------------------AYKNVNQEVVDFEKLDD 77 (242)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-------------------GGGGCEEEECCGGGGGG
T ss_pred cCCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-------------------ccCCceEEecCcCCHHH
Confidence 467999999999999999999999999 999999987643211 01468899999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 236 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (446)
+.++++++|+||||||..... .++...+++|+.++.++++++++.++++||++||.+++.. +...|+.+|+
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~-~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~~~~--------~~~~Y~~sK~ 148 (242)
T 2bka_A 78 YASAFQGHDVGFCCLGTTRGK-AGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVKG 148 (242)
T ss_dssp GGGGGSSCSEEEECCCCCHHH-HHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred HHHHhcCCCEEEECCCccccc-CCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcCCCC--------CcchHHHHHH
Confidence 999999999999999964321 1234567899999999999999999999999999877431 2357999999
Q ss_pred HHHHHHHhCCC-CEEEEecCCccCCCcccccccce---eecccC--cccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 013273 237 KAEEALIASGL-PYTIVRPGGMERPTDAYKETHNI---TLSQED--TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI 310 (446)
Q Consensus 237 ~~E~~l~~~gl-~~tivRPg~v~gp~~~~~~~~~~---~~~~~~--~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~ 310 (446)
.+|.+++..++ ++++||||++||+.........+ ...... ...+.+++++|+|+++++++.++. ..+.+.+.
T Consensus 149 ~~e~~~~~~~~~~~~~vrpg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~~~~~~~--~~~~~~~~ 226 (242)
T 2bka_A 149 EVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELLE 226 (242)
T ss_dssp HHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEEE
T ss_pred HHHHHHHhcCCCCeEEEcCceecCCCCCCcHHHHHHHHhhcccCccccCCcccCHHHHHHHHHHHHhCcc--ccCeeEee
Confidence 99999999999 59999999999996422100000 000001 012458999999999999999875 24566665
Q ss_pred cC
Q 013273 311 AE 312 (446)
Q Consensus 311 ~~ 312 (446)
++
T Consensus 227 ~~ 228 (242)
T 2bka_A 227 NK 228 (242)
T ss_dssp HH
T ss_pred HH
Confidence 43
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.95 E-value=4.3e-27 Score=229.90 Aligned_cols=218 Identities=15% Similarity=0.044 Sum_probs=159.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++||+|++++|++.+ ..+ ..| +...+.
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~-------------------------~~~---~~~----~~~~~~ 48 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP-------------------------GRI---TWD----ELAASG 48 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT-------------------------TEE---EHH----HHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc-------------------------Cee---ecc----hhhHhh
Confidence 689999999999999999999999999999998642 111 122 223455
Q ss_pred hcCCCEEEEcccCCCCcc-CC-----CCCcccchHHHHHHHHHHHHhCCCC--EEEEEccccccCCC-----Cchhhhch
Q 013273 161 LGNASVVICCIGASEKEV-FD-----ITGPYRIDFQATKNLVDAATIAKVN--HFIMVSSLGTNKFG-----FPAAILNL 227 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~-~~-----~~~~~~vNv~g~~~l~~aa~~~~v~--r~V~vSS~~~~~~~-----~~~~~~~~ 227 (446)
+.++|+|||+||...... .. ....++.|+.++.+|++++++.+.+ +||+.||.+++... .++.+..+
T Consensus 49 l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~~~ 128 (298)
T 4b4o_A 49 LPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPGGD 128 (298)
T ss_dssp CCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCCSC
T ss_pred ccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCccc
Confidence 789999999998532211 11 1234677999999999999887654 58888887774332 22334445
Q ss_pred hhHHHHHHHHHHHHHH--hCCCCEEEEecCCccCCCcccccc-------cceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 228 FWGVLLWKRKAEEALI--ASGLPYTIVRPGGMERPTDAYKET-------HNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~--~~gl~~tivRPg~v~gp~~~~~~~-------~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
...|+..|...|.... ..+++++++||+.+||+++..... ........+..+.+|||++|+|++++.++++
T Consensus 129 ~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~ihv~Dva~a~~~~~~~ 208 (298)
T 4b4o_A 129 FDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGGGAMGHMLLPFRLGLGGPIGSGHQFFPWIHIGDLAGILTHALEA 208 (298)
T ss_dssp SSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTSHHHHHHHHHHHTTCCCCBTTSCSBCCEEEHHHHHHHHHHHHHC
T ss_pred cchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCCCchhHHHHHHhcCCcceecccCceeecCcHHHHHHHHHHHHhC
Confidence 5556767666665543 578999999999999997543111 1111112334455789999999999999998
Q ss_pred CCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 299 RSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+. ..++||++++..+++.++.+.+++.+|+..
T Consensus 209 ~~--~~g~yn~~~~~~~t~~e~~~~ia~~lgrp~ 240 (298)
T 4b4o_A 209 NH--VHGVLNGVAPSSATNAEFAQTFGAALGRRA 240 (298)
T ss_dssp TT--CCEEEEESCSCCCBHHHHHHHHHHHHTCCC
T ss_pred CC--CCCeEEEECCCccCHHHHHHHHHHHhCcCC
Confidence 75 367999999999999999999999998753
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.95 E-value=5.5e-27 Score=229.41 Aligned_cols=220 Identities=19% Similarity=0.210 Sum_probs=167.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-------hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
+|+|+|||||||||++|+++|+++|++|++++|+. ++...+ +.+.. .+++++.+|+.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~---------------~~v~~v~~D~~ 65 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQS---------------LGVILLEGDIN 65 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHH---------------TTCEEEECCTT
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHh---------------CCCEEEEeCCC
Confidence 46899999999999999999999999999999987 433332 11111 46899999999
Q ss_pred ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhch-hhH
Q 013273 153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWG 230 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~-~~~ 230 (446)
|.+++.++++++|+||||+|... +.++.+++++|+++| ++|||+ |+.+.... +.....+ ...
T Consensus 66 d~~~l~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~--~~~~~~p~~~~ 129 (307)
T 2gas_A 66 DHETLVKAIKQVDIVICAAGRLL-------------IEDQVKIIKAIKEAGNVKKFFP-SEFGLDVD--RHDAVEPVRQV 129 (307)
T ss_dssp CHHHHHHHHTTCSEEEECSSSSC-------------GGGHHHHHHHHHHHCCCSEEEC-SCCSSCTT--SCCCCTTHHHH
T ss_pred CHHHHHHHHhCCCEEEECCcccc-------------cccHHHHHHHHHhcCCceEEee-cccccCcc--cccCCCcchhH
Confidence 99999999999999999998632 446789999999998 999984 55543211 1111122 456
Q ss_pred HHHHHHHHHHHHHhCCCCEEEEecCCccCCCccccc--------ccceeecccCcccCCccCHHHHHHHHHHHHhCCCCC
Q 013273 231 VLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKE--------THNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLS 302 (446)
Q Consensus 231 Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~--------~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~ 302 (446)
| .+|+.+|+++++.|+++++||||+++++...... ...+.+.........+++++|+|++++.++.++. .
T Consensus 130 y-~sK~~~e~~~~~~~i~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~ 207 (307)
T 2gas_A 130 F-EEKASIRRVIEAEGVPYTYLCCHAFTGYFLRNLAQLDATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPN-T 207 (307)
T ss_dssp H-HHHHHHHHHHHHHTCCBEEEECCEETTTTGGGTTCTTCSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGG-G
T ss_pred H-HHHHHHHHHHHHcCCCeEEEEcceeeccccccccccccccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCcc-c
Confidence 8 9999999999999999999999999986422111 1111111222334468999999999999998765 4
Q ss_pred CCcEEEEecC-CCCChhhHHHHHHhccCCCCC
Q 013273 303 YCKVVEVIAE-TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 303 ~~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+++|++.++ ...++.++.+++++++|+...
T Consensus 208 ~~~~~~~~~~~~~~s~~e~~~~~~~~~g~~~~ 239 (307)
T 2gas_A 208 LNKAVHIRLPKNYLTQNEVIALWEKKIGKTLE 239 (307)
T ss_dssp TTEEEECCCGGGEEEHHHHHHHHHHHHTSCCE
T ss_pred cCceEEEeCCCCcCCHHHHHHHHHHHhCCCCc
Confidence 5788888765 578999999999999998754
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=8.5e-27 Score=234.07 Aligned_cols=221 Identities=18% Similarity=0.142 Sum_probs=168.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC-CCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-LEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-l~d~~~~~ 158 (446)
+|+|||||||||||++|++.|+++|++|++++|+.++... +.+.. ..+++++.+| ++|.+++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~--~~l~~--------------~~~v~~v~~D~l~d~~~l~ 68 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA--EELQA--------------IPNVTLFQGPLLNNVPLMD 68 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH--HHHHT--------------STTEEEEESCCTTCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH--HHHhh--------------cCCcEEEECCccCCHHHHH
Confidence 5789999999999999999999999999999998876421 11111 1478999999 99999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
++++++|+||||++... ...|..+ .+++++|++.+ ++||||+||.+...++. .+...|+.+|+.
T Consensus 69 ~~~~~~d~Vi~~a~~~~---------~~~~~~~-~~l~~aa~~~g~v~~~V~~SS~~~~~~~~-----~~~~~y~~sK~~ 133 (352)
T 1xgk_A 69 TLFEGAHLAFINTTSQA---------GDEIAIG-KDLADAAKRAGTIQHYIYSSMPDHSLYGP-----WPAVPMWAPKFT 133 (352)
T ss_dssp HHHTTCSEEEECCCSTT---------SCHHHHH-HHHHHHHHHHSCCSEEEEEECCCGGGTSS-----CCCCTTTHHHHH
T ss_pred HHHhcCCEEEEcCCCCC---------cHHHHHH-HHHHHHHHHcCCccEEEEeCCccccccCC-----CCCccHHHHHHH
Confidence 99999999999987532 1347776 99999999998 99999999986322321 223469999999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCccccc----------ccce--eecccCcccCCccCH-HHHHHHHHHHHhCCC-CCC
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAYKE----------THNI--TLSQEDTLFGGQVSN-LQVAELLACMAKNRS-LSY 303 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~~~----------~~~~--~~~~~~~~~~~~v~~-~DvA~ai~~ll~~~~-~~~ 303 (446)
+|+++++.|+++++|||+ +||+...... ...+ .+.........++|+ +|+|++++.++.++. ...
T Consensus 134 ~E~~~~~~gi~~~ivrpg-~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~~~ 212 (352)
T 1xgk_A 134 VENYVRQLGLPSTFVYAG-IYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWN 212 (352)
T ss_dssp HHHHHHTSSSCEEEEEEC-EEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHT
T ss_pred HHHHHHHcCCCEEEEecc-eecCCchhcccccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchhhC
Confidence 999999999999999987 5776432110 0011 001112223358999 899999999998752 125
Q ss_pred CcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 304 CKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 304 ~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+++||+++ ...++.++.+.+.+++|....
T Consensus 213 g~~~~l~~-~~~s~~e~~~~i~~~~G~~~~ 241 (352)
T 1xgk_A 213 GHRIALTF-ETLSPVQVCAAFSRALNRRVT 241 (352)
T ss_dssp TCEEEECS-EEECHHHHHHHHHHHHTSCEE
T ss_pred CeEEEEec-CCCCHHHHHHHHHHHHCCCCc
Confidence 88999996 468999999999999988644
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=4.2e-27 Score=235.55 Aligned_cols=229 Identities=13% Similarity=0.079 Sum_probs=169.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|+|||||||||||++|+++|+++| ++|++++|+..... ....+++++.+|++|.+
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~~~~~~V~~~~r~~~~~~--------------------~~~~~~~~~~~Dl~d~~ 61 (364)
T 2v6g_A 2 SVALIVGVTGIIGNSLAEILPLADTPGGPWKVYGVARRTRPAW--------------------HEDNPINYVQCDISDPD 61 (364)
T ss_dssp EEEEEETTTSHHHHHHHHHTTSTTCTTCSEEEEEEESSCCCSC--------------------CCSSCCEEEECCTTSHH
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCCCCceEEEEEeCCCCccc--------------------cccCceEEEEeecCCHH
Confidence 689999999999999999999999 99999999875421 01257899999999999
Q ss_pred cHHHHhcC---CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEE-------EEccccccCCC----
Q 013273 156 QIEPALGN---ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFI-------MVSSLGTNKFG---- 219 (446)
Q Consensus 156 ~~~~a~~~---~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V-------~vSS~~~~~~~---- 219 (446)
++.+++++ +|+||||||... .++...+++|+.++.+++++|++. +++||| |+||.+++...
T Consensus 62 ~~~~~~~~~~~~d~vih~a~~~~---~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~g~~i~~Ss~~vyg~~~~~~ 138 (364)
T 2v6g_A 62 DSQAKLSPLTDVTHVFYVTWANR---STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQTGRKHYMGPFESYGKIESHD 138 (364)
T ss_dssp HHHHHHTTCTTCCEEEECCCCCC---SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEECCTHHHHCCGGGTTTSCCCC
T ss_pred HHHHHHhcCCCCCEEEECCCCCc---chHHHHHHHhHHHHHHHHHHHHHhccccceEEeccCceEEEechhhccccccCC
Confidence 99999988 999999999653 244556889999999999999988 899998 78987764321
Q ss_pred ---Cchhhhch-hhHHHHHHHHHHHHHHhCC-CCEEEEecCCccCCCcccccc----------------cceeecccC--
Q 013273 220 ---FPAAILNL-FWGVLLWKRKAEEALIASG-LPYTIVRPGGMERPTDAYKET----------------HNITLSQED-- 276 (446)
Q Consensus 220 ---~~~~~~~~-~~~Y~~sK~~~E~~l~~~g-l~~tivRPg~v~gp~~~~~~~----------------~~~~~~~~~-- 276 (446)
.++.+..+ ...|......+.++.+..| ++++++||+++||+++..... ..+.+....
T Consensus 139 ~~~~E~~~~~~~~~~y~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 218 (364)
T 2v6g_A 139 PPYTEDLPRLKYMNFYYDLEDIMLEEVEKKEGLTWSVHRPGNIFGFSPYSMMNLVGTLCVYAAICKHEGKVLRFTGCKAA 218 (364)
T ss_dssp SSBCTTSCCCSSCCHHHHHHHHHHHHHTTSTTCEEEEEEESSEECCCTTCSSCHHHHHHHHHHHHHHHTCCBCCCSCHHH
T ss_pred CCCCccccCCccchhhHHHHHHHHHHhhcCCCceEEEECCCceeCCCCCcccchHHHHHHHHHHHHhcCCceecCCCccc
Confidence 12222222 4457443333333333366 999999999999997532111 000101111
Q ss_pred -cccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 277 -TLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 277 -~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
..+..+++++|+|++++.+++++. ..+++||++++...++.++.+++.+++|....
T Consensus 219 ~~~~~~~~~v~Dva~a~~~~~~~~~-~~g~~~ni~~~~~~s~~e~~~~i~~~~g~~~~ 275 (364)
T 2v6g_A 219 WDGYSDCSDADLIAEHHIWAAVDPY-AKNEAFNVSNGDVFKWKHFWKVLAEQFGVECG 275 (364)
T ss_dssp HHSCBCCEEHHHHHHHHHHHHHCGG-GTTEEEEECCSCCBCHHHHHHHHHHHHTCCBC
T ss_pred ccccCCCCcHHHHHHHHHHHHhCCC-CCCceEEecCCCcCCHHHHHHHHHHHhCCCCC
Confidence 112356788999999999998764 35789999999889999999999999987643
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=9.2e-27 Score=224.99 Aligned_cols=232 Identities=15% Similarity=0.158 Sum_probs=174.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||++++++|+++|++|++++|+......+.+++.. ..++.++.+|++|.+++
T Consensus 14 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~ 79 (278)
T 2bgk_A 14 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------------PDVISFVHCDVTKDEDV 79 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCC--------------CCceEEEECCCCCHHHH
Confidence 5678999999999999999999999999999999988766554433210 13799999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||..+...
T Consensus 80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~ 159 (278)
T 2bgk_A 80 RNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFTA 159 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTCC
T ss_pred HHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCCCeEEEEeeccccCC
Confidence 88874 79999999996431 1123345688999999999998865 36679999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc-cc-e---eecccCcccCCccCHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HN-I---TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~-~~-~---~~~~~~~~~~~~v~~~ 286 (446)
.. .+...|+.+|+..|.+++. .|+++++||||+++++....... .. . .........+.+++++
T Consensus 160 ~~-----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (278)
T 2bgk_A 160 GE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRAE 234 (278)
T ss_dssp CT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCHH
T ss_pred CC-----CCCcchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeceecchhhhhhcccchhHHHHhhhcccccccccCCHH
Confidence 21 1456799999999988752 69999999999999985321110 00 0 0001112235689999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
|+|+++++++.++. ...|++|++.++...++.++.+++.+++
T Consensus 235 dva~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~e~~~~i~~~~ 277 (278)
T 2bgk_A 235 DVADAVAYLAGDESKYVSGLNLVIDGGYTRTNPAFPTALKHGL 277 (278)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGGGCCTHHHHHSCSCC
T ss_pred HHHHHHHHHcCcccccCCCCEEEECCcccccCCccchhhhhhc
Confidence 99999999997643 2458999999998888999998887764
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.95 E-value=7.8e-28 Score=260.72 Aligned_cols=236 Identities=14% Similarity=0.145 Sum_probs=179.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+|+|||||||||||++|+++|+++ |++|++++|+..+...+ ....+++++.+|++|.++
T Consensus 313 ~~~~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~------------------~~~~~v~~v~~Dl~d~~~ 374 (660)
T 1z7e_A 313 RRRTRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------------LNHPHFHFVEGDISIHSE 374 (660)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGG------------------TTCTTEEEEECCTTTCHH
T ss_pred ccCceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhh------------------ccCCceEEEECCCCCcHH
Confidence 46789999999999999999999998 89999999987653221 012579999999999765
Q ss_pred -HHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhh----
Q 013273 157 -IEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAI---- 224 (446)
Q Consensus 157 -~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~---- 224 (446)
+.+++.++|+||||||.... ...++...+++|+.++.+++++|++.+ +||||+||.+++... .++.+
T Consensus 375 ~~~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~~ 453 (660)
T 1z7e_A 375 WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYR-KRIIFPSTSEVYGMCSDKYFDEDHSNLIV 453 (660)
T ss_dssp HHHHHHHHCSEEEECCCCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHHTT-CEEEEECCGGGGBTCCSSSBCTTTCCEEE
T ss_pred HHHHhhcCCCEEEECceecCccccccCHHHHHHhhhHHHHHHHHHHHHhC-CEEEEEecHHHcCCCCCcccCCCcccccc
Confidence 77888999999999996542 123445567899999999999999988 899999998774321 11111
Q ss_pred ---hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-------------------cccceeecccCcc
Q 013273 225 ---LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-------------------ETHNITLSQEDTL 278 (446)
Q Consensus 225 ---~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-------------------~~~~~~~~~~~~~ 278 (446)
..+.+.|+.+|+.+|.+++ +.|++++++|||++||++.... ....+.+......
T Consensus 454 ~p~~~p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~ 533 (660)
T 1z7e_A 454 GPVNKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQ 533 (660)
T ss_dssp CCTTCTTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCEEEEGGGCC
T ss_pred CcccCCCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCcEEeCCCCe
Confidence 1455689999999999885 3699999999999999974210 0011111112223
Q ss_pred cCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC-CCChhhHHHHHHhccCCCC
Q 013273 279 FGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET-TAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~-~~t~~~i~e~l~~i~~~~~ 332 (446)
...++|++|+|++++.+++++. ...+++||++++. .+++.++.+.+.+++|...
T Consensus 534 ~~~~i~v~Dva~ai~~~l~~~~~~~~g~~~ni~~~~~~~s~~el~~~i~~~~g~~~ 589 (660)
T 1z7e_A 534 KRCFTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHP 589 (660)
T ss_dssp EEECEEHHHHHHHHHHHHHCGGGTTTTEEEEECCGGGEEEHHHHHHHHHHHHHHCT
T ss_pred EEEEEEHHHHHHHHHHHHhCccccCCCeEEEECCCCCCcCHHHHHHHHHHHhcCCC
Confidence 3468999999999999998753 1357899999886 7899999999999988653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-27 Score=226.62 Aligned_cols=215 Identities=16% Similarity=0.111 Sum_probs=169.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++++++|+ +|++|++++|+.... .+ +.+|++|.+++.++
T Consensus 1 m~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~~~------------------------~~---~~~Dl~~~~~~~~~ 52 (273)
T 2ggs_A 1 MRTLITGASGQLGIELSRLLS-ERHEVIKVYNSSEIQ------------------------GG---YKLDLTDFPRLEDF 52 (273)
T ss_dssp CCEEEETTTSHHHHHHHHHHT-TTSCEEEEESSSCCT------------------------TC---EECCTTSHHHHHHH
T ss_pred CEEEEECCCChhHHHHHHHHh-cCCeEEEecCCCcCC------------------------CC---ceeccCCHHHHHHH
Confidence 479999999999999999999 489999999986410 12 78999999999999
Q ss_pred hcC--CCEEEEcccCCCCc--cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC----CchhhhchhhHHH
Q 013273 161 LGN--ASVVICCIGASEKE--VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----FPAAILNLFWGVL 232 (446)
Q Consensus 161 ~~~--~D~VI~~Ag~~~~~--~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----~~~~~~~~~~~Y~ 232 (446)
+++ +|+||||||..... ..++...+++|+.++.+++++|++.++ +|||+||.+++... .++.+..+...|+
T Consensus 53 ~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~iv~~SS~~~~~~~~~~~~e~~~~~~~~~Y~ 131 (273)
T 2ggs_A 53 IIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKVIDS-YIVHISTDYVFDGEKGNYKEEDIPNPINYYG 131 (273)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC-EEEEEEEGGGSCSSSCSBCTTSCCCCSSHHH
T ss_pred HHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHHhCC-eEEEEecceeEcCCCCCcCCCCCCCCCCHHH
Confidence 976 99999999965422 235566788999999999999999887 99999998774321 1223344567899
Q ss_pred HHHHHHHHHHHhCCCCEEEEecCCccCCCcccc-------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCc
Q 013273 233 LWKRKAEEALIASGLPYTIVRPGGMERPTDAYK-------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCK 305 (446)
Q Consensus 233 ~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~-------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~ 305 (446)
.+|+.+|.+++. +++++|||+++||+..... ....+.+. .. ...+++++|+|++++.++.++. ++
T Consensus 132 ~sK~~~e~~~~~--~~~~~iR~~~v~G~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~dva~~i~~~~~~~~---~g 203 (273)
T 2ggs_A 132 LSKLLGETFALQ--DDSLIIRTSGIFRNKGFPIYVYKTLKEGKTVFAF--KG-YYSPISARKLASAILELLELRK---TG 203 (273)
T ss_dssp HHHHHHHHHHCC--TTCEEEEECCCBSSSSHHHHHHHHHHTTCCEEEE--SC-EECCCBHHHHHHHHHHHHHHTC---CE
T ss_pred HHHHHHHHHHhC--CCeEEEeccccccccHHHHHHHHHHHcCCCEEee--cC-CCCceEHHHHHHHHHHHHhcCc---CC
Confidence 999999999987 8999999999998432110 00111111 11 4578999999999999998764 56
Q ss_pred EEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 306 VVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 306 v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+||+.+ ...++.++.+++.+++|....
T Consensus 204 ~~~i~~-~~~s~~e~~~~~~~~~g~~~~ 230 (273)
T 2ggs_A 204 IIHVAG-ERISRFELALKIKEKFNLPGE 230 (273)
T ss_dssp EEECCC-CCEEHHHHHHHHHHHTTCCSC
T ss_pred eEEECC-CcccHHHHHHHHHHHhCCChh
Confidence 999999 888999999999999987653
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-27 Score=230.88 Aligned_cols=221 Identities=15% Similarity=0.139 Sum_probs=166.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-h-----hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-Q-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~-----~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+|+|+|||||||||++|+++|+++|++|++++|+. + +...+ +.+.. .+++++.+|+.|
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l-~~~~~---------------~~v~~v~~D~~d 67 (321)
T 3c1o_A 4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLR-EEFRS---------------MGVTIIEGEMEE 67 (321)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHH-HHHHH---------------TTCEEEECCTTC
T ss_pred ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHH-HHhhc---------------CCcEEEEecCCC
Confidence 46899999999999999999999999999999986 2 22222 11111 568999999999
Q ss_pred hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhch-hhHH
Q 013273 154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGV 231 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~-~~~Y 231 (446)
.+++.++++++|+||||+|... +.++.+++++|++++ ++|||+ |+.+... .+.....+ ...|
T Consensus 68 ~~~l~~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~y 131 (321)
T 3c1o_A 68 HEKMVSVLKQVDIVISALPFPM-------------ISSQIHIINAIKAAGNIKRFLP-SDFGCEE--DRIKPLPPFESVL 131 (321)
T ss_dssp HHHHHHHHTTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCCEEEC-SCCSSCG--GGCCCCHHHHHHH
T ss_pred HHHHHHHHcCCCEEEECCCccc-------------hhhHHHHHHHHHHhCCccEEec-cccccCc--cccccCCCcchHH
Confidence 9999999999999999998632 445789999999998 999983 5544311 11111223 4568
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcccc--------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYK--------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~--------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~ 303 (446)
.+|..+|+++++.|+++++|||++++++..... ....+.+.........+++++|+|++++.++.++. ..
T Consensus 132 -~sK~~~e~~~~~~~~~~~~lrp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~ 209 (321)
T 3c1o_A 132 -EKKRIIRRAIEAAALPYTYVSANCFGAYFVNYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPR-CC 209 (321)
T ss_dssp -HHHHHHHHHHHHHTCCBEEEECCEEHHHHHHHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGG-GT
T ss_pred -HHHHHHHHHHHHcCCCeEEEEeceeccccccccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCcc-cc
Confidence 999999999999999999999999887531110 11111222222334468999999999999999875 45
Q ss_pred CcEEEEecC-CCCChhhHHHHHHhccCCCCCC
Q 013273 304 CKVVEVIAE-TTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 304 ~~v~ni~~~-~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
+++|++.++ ...++.++.+++.+++|+....
T Consensus 210 g~~~~~~g~~~~~t~~e~~~~~~~~~g~~~~~ 241 (321)
T 3c1o_A 210 NRIVIYRPPKNIISQNELISLWEAKSGLSFKK 241 (321)
T ss_dssp TEEEECCCGGGEEEHHHHHHHHHHHHTSCCCE
T ss_pred CeEEEEeCCCCcccHHHHHHHHHHHcCCccee
Confidence 788998864 6789999999999999987543
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=8.5e-27 Score=225.82 Aligned_cols=234 Identities=15% Similarity=0.137 Sum_probs=162.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++...+.+++.... ....++.++.+|++|.+++
T Consensus 4 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~D~~~~~~~ 73 (278)
T 1spx_A 4 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAG----------VSEQNVNSVVADVTTDAGQ 73 (278)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT----------CCGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcc----------cCCCceeEEecccCCHHHH
Confidence 456899999999999999999999999999999999887776655542210 0115689999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccc-
Q 013273 158 EPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGT- 215 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~- 215 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++... + ++||++||..+
T Consensus 74 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~-g~iv~isS~~~~ 152 (278)
T 1spx_A 74 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTK-GEIVNISSIASG 152 (278)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCTTSS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEeccccc
Confidence 88775 89999999996432 22334556889999999999988653 6 79999999865
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--ccce-------eecccCccc
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNI-------TLSQEDTLF 279 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~~~~-------~~~~~~~~~ 279 (446)
... ......|+.+|+..+.+.+ ..|+++++||||+++++...... .... .........
T Consensus 153 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 226 (278)
T 1spx_A 153 LHA------TPDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPA 226 (278)
T ss_dssp SSC------CTTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTT
T ss_pred ccC------CCCccHHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHhcCCC
Confidence 332 1234579999999998875 26999999999999988432110 0000 000001123
Q ss_pred CCccCHHHHHHHHHHHHhCCC-C-CCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 280 GGQVSNLQVAELLACMAKNRS-L-SYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~-~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
+.+++++|+|+++++++.++. . ..|++|++.++...+..++++++.++.
T Consensus 227 ~~~~~~~dvA~~v~~l~s~~~~~~~tG~~~~vdgG~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 227 GVMGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGSSLIMGLHCQDFAKLL 277 (278)
T ss_dssp SSCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGC------------
T ss_pred cCCCCHHHHHHHHHHHcCccccCcccCcEEEECCCcccccCcccccHHHHh
Confidence 467899999999999997643 1 358999999998888889998887764
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=9.8e-27 Score=229.31 Aligned_cols=220 Identities=16% Similarity=0.171 Sum_probs=166.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++||||||||+||++|+++|+++|++|++++|+.+ +...+ +.+.. .+++++.+|+.|.+++.
T Consensus 11 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~-~~l~~---------------~~v~~v~~Dl~d~~~l~ 74 (318)
T 2r6j_A 11 KSKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLL-DEFQS---------------LGAIIVKGELDEHEKLV 74 (318)
T ss_dssp CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHH-HHHHH---------------TTCEEEECCTTCHHHHH
T ss_pred CCeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHH-HHhhc---------------CCCEEEEecCCCHHHHH
Confidence 358999999999999999999999999999999875 33222 11111 46899999999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhch-hhHHHHHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWKR 236 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~-~~~Y~~sK~ 236 (446)
++++++|+||||++... +.++.+++++|++++ ++|||+ |+.+... .+.....+ ...| .+|.
T Consensus 75 ~a~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~--~~~~~~~p~~~~y-~sK~ 137 (318)
T 2r6j_A 75 ELMKKVDVVISALAFPQ-------------ILDQFKILEAIKVAGNIKRFLP-SDFGVEE--DRINALPPFEALI-ERKR 137 (318)
T ss_dssp HHHTTCSEEEECCCGGG-------------STTHHHHHHHHHHHCCCCEEEC-SCCSSCT--TTCCCCHHHHHHH-HHHH
T ss_pred HHHcCCCEEEECCchhh-------------hHHHHHHHHHHHhcCCCCEEEe-eccccCc--ccccCCCCcchhH-HHHH
Confidence 99999999999998532 345789999999998 999985 6554321 11111223 3457 9999
Q ss_pred HHHHHHHhCCCCEEEEecCCccCCCccc-----ccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEec
Q 013273 237 KAEEALIASGLPYTIVRPGGMERPTDAY-----KETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 237 ~~E~~l~~~gl~~tivRPg~v~gp~~~~-----~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~ 311 (446)
.+|+++++.|+++++|||+++++..... .....+.+.........+++++|+|++++.++.++. ..+++|++.+
T Consensus 138 ~~e~~~~~~~~~~~~lr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~~~~g 216 (318)
T 2r6j_A 138 MIRRAIEEANIPYTYVSANCFASYFINYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPR-ALNRVVIYRP 216 (318)
T ss_dssp HHHHHHHHTTCCBEEEECCEEHHHHHHHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGG-GTTEEEECCC
T ss_pred HHHHHHHhcCCCeEEEEcceehhhhhhhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCcc-ccCeEEEecC
Confidence 9999999999999999999887642110 011112222223334468999999999999998765 4578888876
Q ss_pred C-CCCChhhHHHHHHhccCCCCC
Q 013273 312 E-TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 312 ~-~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+ ...++.++.+++++++|+...
T Consensus 217 ~~~~~s~~e~~~~~~~~~g~~~~ 239 (318)
T 2r6j_A 217 STNIITQLELISRWEKKIGKKFK 239 (318)
T ss_dssp GGGEEEHHHHHHHHHHHHTCCCE
T ss_pred CCCccCHHHHHHHHHHHhCCCCc
Confidence 4 678999999999999998754
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.94 E-value=5e-27 Score=247.35 Aligned_cols=221 Identities=15% Similarity=0.031 Sum_probs=162.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|++.|+++|++|++++|+..+. ..+.+|+.| .+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~~~~~---------------------------~~v~~d~~~--~~~~ 197 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQLQTGGHEVIQLVRKEPKP---------------------------GKRFWDPLN--PASD 197 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSSCCT---------------------------TCEECCTTS--CCTT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCc---------------------------cceeecccc--hhHH
Confidence 68999999999999999999999999999999987531 125678875 3567
Q ss_pred HhcCCCEEEEcccCCCCc---cCCCCCcccchHHHHHHHHHH-HHhCCCCEEEEEccccccCCC------Cchhhhchhh
Q 013273 160 ALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDA-ATIAKVNHFIMVSSLGTNKFG------FPAAILNLFW 229 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~---~~~~~~~~~vNv~g~~~l~~a-a~~~~v~r~V~vSS~~~~~~~------~~~~~~~~~~ 229 (446)
++.++|+||||||..... ..+....+++|+.++.+|+++ +++.++++|||+||.+++... .++.+ .+..
T Consensus 198 ~l~~~D~Vih~A~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~-~~~~ 276 (516)
T 3oh8_A 198 LLDGADVLVHLAGEPIFGRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESE-SGDD 276 (516)
T ss_dssp TTTTCSEEEECCCC-----CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSC-CCSS
T ss_pred hcCCCCEEEECCCCccccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCC-CCcC
Confidence 788999999999965322 223344678899999999999 566789999999998874411 11122 2456
Q ss_pred HHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCccccccc-------ceeecccCcccCCccCHHHHHHHHHHHHhCC
Q 013273 230 GVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETH-------NITLSQEDTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 230 ~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~-------~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
.|+..|...|.++. ..|+++++||||++||++....... ............++||++|+|++++.+++++
T Consensus 277 ~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~~~~~~~~~~~~~g~~~~~g~g~~~~~~i~v~Dva~ai~~~l~~~ 356 (516)
T 3oh8_A 277 FLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRGGMLPLLKTLFSTGLGGKFGDGTSWFSWIAIDDLTDIYYRAIVDA 356 (516)
T ss_dssp HHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTBSHHHHHHHTTC---CCCCTTSCCEECEEEHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCCChHHHHHHHHHhCCCcccCCCCceEceEeHHHHHHHHHHHHhCc
Confidence 78999998886643 5899999999999999974321100 0011112233447899999999999999987
Q ss_pred CCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 300 SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 300 ~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
. .+++||++++..+++.++.+.+.+++|...
T Consensus 357 ~--~~g~~ni~~~~~~s~~el~~~i~~~~g~~~ 387 (516)
T 3oh8_A 357 Q--ISGPINAVAPNPVSNADMTKILATSMHRPA 387 (516)
T ss_dssp T--CCEEEEESCSCCEEHHHHHHHTTC------
T ss_pred c--cCCcEEEECCCCCCHHHHHHHHHHHhCCCC
Confidence 5 367999999999999999999999988754
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.94 E-value=4.6e-27 Score=230.10 Aligned_cols=225 Identities=18% Similarity=0.197 Sum_probs=166.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhH--HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRA--ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~--~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|+|||||||||++|++.|+++|++|++++|+.... ....+.++.+ . ..+++++.+|+.|.+++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l--~----------~~~v~~v~~D~~d~~~l 71 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF--K----------ASGANIVHGSIDDHASL 71 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH--H----------TTTCEEECCCTTCHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHH--H----------hCCCEEEEeccCCHHHH
Confidence 57899999999999999999999999999999985422 1111111111 0 15789999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCchhhhch-hhHHHHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPAAILNL-FWGVLLWK 235 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~~~~~~-~~~Y~~sK 235 (446)
.++++++|+||||+|... +.++.+++++|++++ ++|||+ |+.+.... +.....+ ...| .+|
T Consensus 72 ~~~~~~~d~vi~~a~~~~-------------~~~~~~l~~aa~~~g~v~~~v~-S~~g~~~~--~~~~~~p~~~~y-~sK 134 (308)
T 1qyc_A 72 VEAVKNVDVVISTVGSLQ-------------IESQVNIIKAIKEVGTVKRFFP-SEFGNDVD--NVHAVEPAKSVF-EVK 134 (308)
T ss_dssp HHHHHTCSEEEECCCGGG-------------SGGGHHHHHHHHHHCCCSEEEC-SCCSSCTT--SCCCCTTHHHHH-HHH
T ss_pred HHHHcCCCEEEECCcchh-------------hhhHHHHHHHHHhcCCCceEee-cccccCcc--ccccCCcchhHH-HHH
Confidence 999999999999998532 345789999999998 999985 66553211 1111223 3457 999
Q ss_pred HHHHHHHHhCCCCEEEEecCCccCCCccc-c-------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEE
Q 013273 236 RKAEEALIASGLPYTIVRPGGMERPTDAY-K-------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 236 ~~~E~~l~~~gl~~tivRPg~v~gp~~~~-~-------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
..+|+++++.|++++++||+++++..... . ....+.+.........+++++|+|++++.++.++. ..+++|
T Consensus 135 ~~~e~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~-~~~~~~ 213 (308)
T 1qyc_A 135 AKVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPR-TLNKTL 213 (308)
T ss_dssp HHHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGG-GTTEEE
T ss_pred HHHHHHHHhcCCCeEEEEeceeccccccccccccccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCcc-ccCeEE
Confidence 99999999999999999999988742111 0 11111222222334468999999999999998765 457889
Q ss_pred EEecC-CCCChhhHHHHHHhccCCCCCC
Q 013273 308 EVIAE-TTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 308 ni~~~-~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
++.++ ...++.++.+++.+++|+....
T Consensus 214 ~~~g~~~~~s~~e~~~~~~~~~g~~~~~ 241 (308)
T 1qyc_A 214 YLRLPANTLSLNELVALWEKKIDKTLEK 241 (308)
T ss_dssp ECCCGGGEEEHHHHHHHHHHHTTSCCEE
T ss_pred EEeCCCCccCHHHHHHHHHHHhCCCCce
Confidence 98765 5789999999999999987543
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=1.9e-26 Score=219.71 Aligned_cols=221 Identities=13% Similarity=0.144 Sum_probs=166.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 9 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 75 (255)
T 1fmc_A 9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---------G----GQAFACRCDITSEQEL 75 (255)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh---------C----CceEEEEcCCCCHHHH
Confidence 56789999999999999999999999999999999988777666555432 1 5789999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCCc-----cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPALG-------NASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ ++|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 76 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 153 (255)
T 1fmc_A 76 SALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN-- 153 (255)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC--
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhcCCC--
Confidence 88874 899999999965321 22334567899999999998885 4567899999998764321
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.+...|+.+|...|.+++. .|+++++||||+++++.......... .........+.+++++|+|++++
T Consensus 154 ----~~~~~Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 229 (255)
T 1fmc_A 154 ----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAAL 229 (255)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHHH
T ss_pred ----CCCcccHHHHHHHHHHHHHHHHHhhhcCcEEEEEecccCcchhhhhccChHHHHHHHhcCCcccCCCHHHHHHHHH
Confidence 3456799999999987652 58999999999999874221100000 00001122346789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCCCCh
Q 013273 294 CMAKNRS-LSYCKVVEVIAETTAPL 317 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~~t~ 317 (446)
+++.++. ...+++|+|.++...++
T Consensus 230 ~l~~~~~~~~~G~~~~v~gg~~~s~ 254 (255)
T 1fmc_A 230 FLCSPAASWVSGQILTVSGGGVQEL 254 (255)
T ss_dssp HHHSGGGTTCCSCEEEESTTSCCCC
T ss_pred HHhCCccccCCCcEEEECCceeccC
Confidence 9997643 23588999998876654
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.94 E-value=5.3e-27 Score=236.27 Aligned_cols=200 Identities=16% Similarity=0.036 Sum_probs=163.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|||||||||||++|+++|+++|+ +|++++|+ .|.+++.+
T Consensus 1 M~VlVtGatG~iG~~l~~~L~~~g~~~v~~~d~~--------------------------------------~d~~~l~~ 42 (369)
T 3st7_A 1 MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQ--------------------------------------TKEEELES 42 (369)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEECCTT--------------------------------------CCHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEECCC--------------------------------------CCHHHHHH
Confidence 5899999999999999999999998 77776552 45677888
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccccCCCCchhhhchhhHHHHHHHHH
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKA 238 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~ 238 (446)
+++++|+|||+||.... .++...+++|+.++.+++++|++.+++ ||||+||.+++. .+.|+.+|+.+
T Consensus 43 ~~~~~d~Vih~a~~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~Ss~~~~~----------~~~Y~~sK~~~ 110 (369)
T 3st7_A 43 ALLKADFIVHLAGVNRP--EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------DNPYGESKLQG 110 (369)
T ss_dssp HHHHCSEEEECCCSBCT--TCSTTCSSSCCBHHHHHHHHHTTCSSCCEEEEEEEGGGGS----------CSHHHHHHHHH
T ss_pred HhccCCEEEECCcCCCC--CCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCchhhcC----------CCCchHHHHHH
Confidence 88899999999996543 356677899999999999999999987 999999988743 35799999999
Q ss_pred HHHHHh----CCCCEEEEecCCccCCCcccc-------------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCC
Q 013273 239 EEALIA----SGLPYTIVRPGGMERPTDAYK-------------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL 301 (446)
Q Consensus 239 E~~l~~----~gl~~tivRPg~v~gp~~~~~-------------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~ 301 (446)
|+++++ .|++++++||+++||++.... ....+.+. .......++|++|+|++++.++.++..
T Consensus 111 E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~i~v~Dva~~~~~~l~~~~~ 189 (369)
T 3st7_A 111 EQLLREYAEEYGNTVYIYRWPNLFGKWCKPNYNSVIATFCYKIARNEEIQVN-DRNVELTLNYVDDIVAEIKRAIEGTPT 189 (369)
T ss_dssp HHHHHHHHHHHCCCEEEEEECEEECTTCCTTSSCHHHHHHHHHHTTCCCCCS-CTTCEEEEEEHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHhCCCEEEEECCceeCCCCCCCcchHHHHHHHHHHcCCCeEec-CCCeEEEEEEHHHHHHHHHHHHhCCcc
Confidence 999875 799999999999999964321 01111111 122334689999999999999998862
Q ss_pred CCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 302 SYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 302 ~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
..+++||+.++...++.++.+++.+++|..
T Consensus 190 ~~~~~~~i~~~~~~s~~e~~~~~~~~~g~~ 219 (369)
T 3st7_A 190 IENGVPTVPNVFKVTLGEIVDLLYKFKQSR 219 (369)
T ss_dssp EETTEECCSCCEEEEHHHHHHHHHHHHHHH
T ss_pred cCCceEEeCCCCceeHHHHHHHHHHHhCCC
Confidence 237999999998899999999999998765
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=6.2e-26 Score=218.38 Aligned_cols=222 Identities=16% Similarity=0.131 Sum_probs=167.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. ...++.++.+|++|.++
T Consensus 7 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~~~~~ 74 (262)
T 3pk0_A 7 DLQGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQL------------GSGKVIGVQTDVSDRAQ 74 (262)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------SSSCEEEEECCTTSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh------------CCCcEEEEEcCCCCHHH
Confidence 456789999999999999999999999999999999998888776666532 11579999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||......+
T Consensus 75 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 154 (262)
T 3pk0_A 75 CDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDALIASGSGRVVLTSSITGPITG 154 (262)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCEEEEECCSBTTTBC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEechhhccCC
Confidence 887763 89999999996432 22334556889999999999888654 77899999997653222
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+. .|+++++|+||+++++...................+.+.+++|+|+++
T Consensus 155 -----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v 229 (262)
T 3pk0_A 155 -----YPGWSHYGATKAAQLGFMRTAAIELAPHKITVNAIMPGNIMTEGLLENGEEYIASMARSIPAGALGTPEDIGHLA 229 (262)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHTTCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred -----CCCChhhHHHHHHHHHHHHHHHHHHHhhCcEEEEEEeCcCcCccccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 13456799999999988762 699999999999998742111100000011122345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
++++.+.. ...|++++|.++...
T Consensus 230 ~~L~s~~~~~itG~~i~vdGG~~~ 253 (262)
T 3pk0_A 230 AFLATKEAGYITGQAIAVDGGQVL 253 (262)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhCccccCCcCCEEEECCCeec
Confidence 99997643 356899999887644
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.94 E-value=3.7e-26 Score=222.04 Aligned_cols=239 Identities=17% Similarity=0.158 Sum_probs=180.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+||||+++++.|+++|++|++++|+.++...+.++++.. + ....++.++.+|++|.+++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~-~~~~~~~~~~~Dv~~~~~v 78 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEAL---------G-ANGGAIRYEPTDITNEDET 78 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------C-CSSCEEEEEECCTTSHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh---------C-CCCceEEEEeCCCCCHHHH
Confidence 46789999999999999999999999999999999998888777766543 1 1113799999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||... .+..+++..+++|+.++.++++++.. .+.++||++||.......
T Consensus 79 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 158 (281)
T 3svt_A 79 ARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAAREMVRGGGGSFVGISSIAASNTH 158 (281)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEeCHHHcCCC
Confidence 8776 47899999999621 12233456688999999999998854 455699999998664322
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-c-eeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++........ . ..........+.+.+++|+|+
T Consensus 159 ------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 232 (281)
T 3svt_A 159 ------RWFGAYGVTKSAVDHLMQLAADELGASWVRVNSIRPGLIRTDLVAAITESAELSSDYAMCTPLPRQGEVEDVAN 232 (281)
T ss_dssp ------TTCTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHHHCSSSSCBCHHHHHH
T ss_pred ------CCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcccCHHHHHHHHhcCCCCCCCCHHHHHH
Confidence 334579999999998876 3689999999999998743211000 0 000011223456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCCC-hhhHHHHHHhccCCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTAP-LTPMEELLAKIPSQRA 332 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~t-~~~i~e~l~~i~~~~~ 332 (446)
++++++.+.. ...|++|++.++...+ ..++.+++.++++...
T Consensus 233 ~~~~l~s~~~~~itG~~~~vdgG~~~~~~~~~~~~~~~~~~~~~ 276 (281)
T 3svt_A 233 MAMFLLSDAASFVTGQVINVDGGQMLRRGPDFSAMLEPVFGRDA 276 (281)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTGGGSCCCCCHHHHHHHHCTTG
T ss_pred HHHHHhCcccCCCCCCEEEeCCChhcccCCcchhccccccCCcc
Confidence 9999998643 2468999998887765 6788999998887654
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-25 Score=217.77 Aligned_cols=227 Identities=19% Similarity=0.181 Sum_probs=170.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||++++++|+++|++|++++|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~~~~~v 72 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV------------G----RGAVHHVVDLTNEVSV 72 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH------------C----TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------------C----CCeEEEECCCCCHHHH
Confidence 56789999999999999999999999999999999998877655433 1 5789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 73 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 152 (271)
T 3tzq_B 73 RALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAIPRLISAGGGAIVNISSATAHAA 152 (271)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSB
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCHHHcCC
Confidence 88774 89999999996522 22334566889999999999998 5667789999999876433
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|+..+.+.+ .+|+++++|+||+++++........ ...........+.+.+++|+|+
T Consensus 153 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~ 226 (271)
T 3tzq_B 153 ------YDMSTAYACTKAAIETLTRYVATQYGRHGVRCNAIAPGLVRTPRLEVGLPQPIVDIFATHHLAGRIGEPHEIAE 226 (271)
T ss_dssp ------CSSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTC---CHHHHHHHHTTSTTSSCBCHHHHHH
T ss_pred ------CCCChHHHHHHHHHHHHHHHHHHHHhhcCEEEEEEEeCCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 2345679999999998775 2799999999999999853211100 0001112233456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHh
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAK 326 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~ 326 (446)
++++++.+.. ...|+++++.++....+..+.++...
T Consensus 227 ~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~ 263 (271)
T 3tzq_B 227 LVCFLASDRAAFITGQVIAADSGLLAHLPGLPQIRAS 263 (271)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTTTTBCTTHHHHHHH
T ss_pred HHHHHhCcccCCcCCCEEEECCCccccCCCccccCCc
Confidence 9999998653 34689999988833333445555444
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.94 E-value=4.1e-26 Score=217.41 Aligned_cols=217 Identities=14% Similarity=0.122 Sum_probs=162.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++++|||||+||||+++++.|+++|++|++++|+ .++.+.+.++++.. + .++.++.+|++|.++
T Consensus 2 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~~~ 68 (246)
T 3osu_A 2 KMTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAK---------G----VDSFAIQANVADADE 68 (246)
T ss_dssp CCSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----SCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence 456899999999999999999999999999998885 45666665555432 2 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 147 (246)
T 3osu_A 69 VKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQMLRQRSGAIINLSSVVGAVG- 147 (246)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC-
Confidence 888764 89999999996532 22334557899999999999998 4556779999999765332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+ ..|+++++|+||+++++...................+.+.+++|+|+++
T Consensus 148 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v 222 (246)
T 3osu_A 148 -----NPGQANYVATKAGVIGLTKSAARELASRGITVNAVAPGFIVSDMTDALSDELKEQMLTQIPLARFGQDTDIANTV 222 (246)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCCSCSCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred -----CCCChHHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECCCcCCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 1345679999999988765 3689999999999998743211100000011123345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.+.. ...|++|++.++.
T Consensus 223 ~~l~s~~~~~itG~~i~vdgG~ 244 (246)
T 3osu_A 223 AFLASDKAKYITGQTIHVNGGM 244 (246)
T ss_dssp HHHTSGGGTTCCSCEEEESTTS
T ss_pred HHHhCccccCCCCCEEEeCCCc
Confidence 99997653 2458999998774
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.2e-25 Score=215.52 Aligned_cols=215 Identities=13% Similarity=0.114 Sum_probs=154.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++ ..++.++.+|++|.+++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v 68 (257)
T 3tpc_A 5 LKSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAEL----------------GAAVRFRNADVTNEADA 68 (257)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------------------CEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh----------------CCceEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999988766544322 15689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC----------CCCEEEEE
Q 013273 158 EPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHFIMV 210 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~v~r~V~v 210 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++... +.++||++
T Consensus 69 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~iv~i 148 (257)
T 3tpc_A 69 TAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRLAAEVMSQGEPDADGERGVIVNT 148 (257)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEEEE
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccccCCCCCeEEEEE
Confidence 88774 89999999996532 22345566889999999999998653 45689999
Q ss_pred ccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCccc-CCc
Q 013273 211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQ 282 (446)
Q Consensus 211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~-~~~ 282 (446)
||....... .....|+.+|...+.+.+ ..|+++++|+||++.++................... +.+
T Consensus 149 sS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~r~ 222 (257)
T 3tpc_A 149 ASIAAFDGQ------IGQAAYAASKGGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMPQDVQDALAASVPFPPRL 222 (257)
T ss_dssp CCTHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC--------------CCSSSSCSC
T ss_pred echhhccCC------CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCCHHHHHHHHhcCCCCCCC
Confidence 998663321 345679999999987765 279999999999999884321111111111111222 567
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
.+++|+|+++++++.+. ...|+++++.++...
T Consensus 223 ~~~~dva~~v~~l~s~~-~itG~~i~vdGG~~~ 254 (257)
T 3tpc_A 223 GRAEEYAALVKHICENT-MLNGEVIRLDGALRM 254 (257)
T ss_dssp BCHHHHHHHHHHHHHCT-TCCSCEEEESTTCCC
T ss_pred CCHHHHHHHHHHHcccC-CcCCcEEEECCCccC
Confidence 89999999999999874 367999999887543
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.94 E-value=4.3e-26 Score=218.94 Aligned_cols=216 Identities=13% Similarity=0.105 Sum_probs=163.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~v 69 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI------------G----PAAYAVQMDVTRQDSI 69 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CCceEEEeeCCCHHHH
Confidence 45689999999999999999999999999999999988777655433 1 5689999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++... + .++||++||.......
T Consensus 70 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 149 (259)
T 4e6p_A 70 DAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQMIAQGRGGKIINMASQAGRRGE 149 (259)
T ss_dssp HHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEECChhhccCC
Confidence 88774 89999999996432 22345566789999999999988543 2 4699999998764322
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~ 281 (446)
.....|+.+|...|.+.+ ..|+++++|+||+++++..... ..............+.
T Consensus 150 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 223 (259)
T 4e6p_A 150 ------ALVAIYCATKAAVISLTQSAGLDLIKHRINVNAIAPGVVDGEHWDGVDALFARYENRPRGEKKRLVGEAVPFGR 223 (259)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred ------CCChHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEECCCccchhhhhhhhhhhhccCChHHHHHHHhccCCCCC
Confidence 335679999999998876 2589999999999999853211 0000000111233456
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
+++++|+|+++++++.+.. ...|++|+|.++...
T Consensus 224 ~~~~~dva~~v~~L~s~~~~~itG~~i~vdgG~~~ 258 (259)
T 4e6p_A 224 MGTAEDLTGMAIFLASAESDYIVSQTYNVDGGNWM 258 (259)
T ss_dssp CBCTHHHHHHHHHTTSGGGTTCCSCEEEESTTSSC
T ss_pred CcCHHHHHHHHHHHhCCccCCCCCCEEEECcChhc
Confidence 8999999999999987543 245899999888643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.2e-25 Score=216.03 Aligned_cols=220 Identities=13% Similarity=0.065 Sum_probs=164.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... .+ .++.++.+|++|.+++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~D~~~~~~~ 72 (263)
T 3ai3_A 5 ISGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEK--------FG----VRVLEVAVDVATPEGV 72 (263)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HC----CCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHh--------cC----CceEEEEcCCCCHHHH
Confidence 45689999999999999999999999999999999988777665555321 01 5689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||..+....
T Consensus 73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 151 (263)
T 3ai3_A 73 DAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPGMRARGGGAIIHNASICAVQPL- 151 (263)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC-
Confidence 88774 89999999996432 223345568899999999988874 3467899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----------cce-eecccC-cccCC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----------HNI-TLSQED-TLFGG 281 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----------~~~-~~~~~~-~~~~~ 281 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++....... ... ...... ...+.
T Consensus 152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 226 (263)
T 3ai3_A 152 -----WYEPIYNVTKAALMMFSKTLATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEHAPIKR 226 (263)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHHCTTCS
T ss_pred -----CCcchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcCCCCCC
Confidence 334579999999998765 269999999999999984221100 000 000001 22356
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
+++++|+|+++++++.++. ...|++|++.++...
T Consensus 227 ~~~~~dvA~~~~~l~s~~~~~~~G~~~~vdgG~~~ 261 (263)
T 3ai3_A 227 FASPEELANFFVFLCSERATYSVGSAYFVDGGMLK 261 (263)
T ss_dssp CBCHHHHHHHHHHHTSTTCTTCCSCEEEESTTCCC
T ss_pred CcCHHHHHHHHHHHcCccccCCCCcEEEECCCccc
Confidence 7999999999999997653 245889999887654
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=218.62 Aligned_cols=225 Identities=13% Similarity=0.113 Sum_probs=161.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+||||++++++|+++|++|++++|+.++...+.+.+ ..++.++.+|++|.+++
T Consensus 3 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~~ 66 (281)
T 3m1a_A 3 ESAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAY----------------PDRAEAISLDVTDGERI 66 (281)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHC----------------TTTEEEEECCTTCHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhc----------------cCCceEEEeeCCCHHHH
Confidence 35689999999999999999999999999999999988877654321 15799999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..++...+++|+.|+.++++++ ++.+.++||++||......
T Consensus 67 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~-- 144 (281)
T 3m1a_A 67 DVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQLS-- 144 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC--
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCccccCC--
Confidence 88774 78999999996422 22334556889999955555554 5667789999999876432
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc---c---cee--e-----cccCcccC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET---H---NIT--L-----SQEDTLFG 280 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~---~---~~~--~-----~~~~~~~~ 280 (446)
..+...|+.+|+.+|.+.+ ..|+++++||||+++++....... . .+. . .......+
T Consensus 145 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (281)
T 3m1a_A 145 ----FAGFSAYSATKAALEQLSEGLADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQLVQGSDGS 220 (281)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHHHHHC----
T ss_pred ----CCCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHHHHhhccCC
Confidence 2345689999999998865 269999999999998874211000 0 000 0 00011223
Q ss_pred CccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHh
Q 013273 281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAK 326 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~ 326 (446)
.+++++|+|+++++++.++. .+..|+++++...........+.+
T Consensus 221 ~~~~~~dva~a~~~~~~~~~--~~~~~~l~s~~~~~i~g~~~~i~~ 264 (281)
T 3m1a_A 221 QPGDPAKAAAAIRLALDTEK--TPLRLALGGDAVDFLTGHLDSVRA 264 (281)
T ss_dssp -CBCHHHHHHHHHHHHHSSS--CCSEEEESHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCC--CCeEEecCchHHHHHHHHHHHHHH
Confidence 57899999999999999875 467899988765444444444333
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.8e-25 Score=211.55 Aligned_cols=219 Identities=17% Similarity=0.148 Sum_probs=163.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.++...+.+.++.. + .++.++.+|++|.+++
T Consensus 11 l~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~~ 77 (260)
T 3awd_A 11 LDNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRME---------G----HDVSSVVMDVTNTESV 77 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEecCCCHHHH
Confidence 46789999999999999999999999999999999988777666555432 1 5799999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCC-C------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~-~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||... . +..++...+++|+.++.++++++.+ .+.++||++||.......
T Consensus 78 ~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 157 (260)
T 3awd_A 78 QNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGRIMLEQKQGVIVAIGSMSGLIVN 157 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEecchhcccC
Confidence 88774 7999999999643 1 1122345578999999999988864 467799999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcc-cccccce-eecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETHNI-TLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~-~~~~~~~-~~~~~~~~~~~~v~~~DvA~ 290 (446)
. ..+...|+.+|...|.+++. .|+++++||||+++++... ....... .........+.+++++|+|+
T Consensus 158 ~----~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 233 (260)
T 3awd_A 158 R----PQQQAAYNASKAGVHQYIRSLAAEWAPHGIRANAVAPTYIETTLTRFGMEKPELYDAWIAGTPMGRVGQPDEVAS 233 (260)
T ss_dssp S----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTTHHHHTCHHHHHHHHHTCTTSSCBCHHHHHH
T ss_pred C----CCCccccHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeeeeccchhhcccCChHHHHHHHhcCCcCCCCCHHHHHH
Confidence 1 12236799999999988762 6999999999999998643 1100000 00001122346789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...+++|++.++.
T Consensus 234 ~~~~l~~~~~~~~~G~~~~v~gg~ 257 (260)
T 3awd_A 234 VVQFLASDAASLMTGAIVNVDAGF 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHhCchhccCCCcEEEECCce
Confidence 9999997642 2468899998774
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=214.51 Aligned_cols=226 Identities=20% Similarity=0.125 Sum_probs=157.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.++.. +. .......++.++.+|++|.+++
T Consensus 5 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~D~~~~~~~ 78 (264)
T 2pd6_A 5 LRSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGP---GS---KEGPPRGNHAAFQADVSEARAA 78 (264)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------------CCEEEECCTTSHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc---Cc---cccccCcceEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999987766654433211 00 0000114689999999999888
Q ss_pred HHHhc-------CC-CEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCC
Q 013273 158 EPALG-------NA-SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~-D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~ 218 (446)
+++++ ++ |+||||||.... +..++...+++|+.++.++++++.+. + .++||++||......
T Consensus 79 ~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 158 (264)
T 2pd6_A 79 RCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQALVSNGCRGSIINISSIVGKVG 158 (264)
T ss_dssp HHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCceEEEECChhhccC
Confidence 87764 45 999999996532 22334566889999999999988653 4 569999999755322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
..+...|+.+|..+|.+++ ..|+++++||||+++++...................+.+++++|+|++
T Consensus 159 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (264)
T 2pd6_A 159 ------NVGQTNYAASKAGVIGLTQTAARELGRHGIRCNSVLPGFIATPMTQKVPQKVVDKITEMIPMGHLGDPEDVADV 232 (264)
T ss_dssp ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSCC----------CTGGGCTTCSCBCHHHHHHH
T ss_pred ------CCCChhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeecccccchhhcCHHHHHHHHHhCCCCCCCCHHHHHHH
Confidence 1345679999999987765 269999999999999985321111000000111123457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
+++++.++. ...++++++.++...
T Consensus 233 ~~~l~~~~~~~~~G~~~~v~gg~~~ 257 (264)
T 2pd6_A 233 VAFLASEDSGYITGTSVEVTGGLFM 257 (264)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTC--
T ss_pred HHHHcCCcccCCCCCEEEECCCcee
Confidence 999997642 346889999888643
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.4e-25 Score=213.49 Aligned_cols=221 Identities=16% Similarity=0.168 Sum_probs=168.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.++
T Consensus 9 ~l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~~~ 75 (256)
T 3gaf_A 9 HLNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQA---------G----GKAIGLECNVTDEQH 75 (256)
T ss_dssp CCTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHH
Confidence 356789999999999999999999999999999999998888777766542 2 679999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 76 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 154 (256)
T 3gaf_A 76 REAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGENTN- 154 (256)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTCCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHcCCC-
Confidence 88776 389999999996532 223455668899999999999874 4566799999998764322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++........ ...........+.+.+++|+|+++
T Consensus 155 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~~ 229 (256)
T 3gaf_A 155 -----VRMASYGSSKAAVNHLTRNIAFDVGPMGIRVNAIAPGAIKTDALATVLTPEIERAMLKHTPLGRLGEAQDIANAA 229 (256)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHCCHHHHHHHHTTCTTSSCBCHHHHHHHH
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEEccccCchhhhccCHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 345679999999998875 2689999999999998732111000 000011123345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
++++.+.. ...|++|++.++...+
T Consensus 230 ~~L~s~~~~~itG~~i~vdgG~~~~ 254 (256)
T 3gaf_A 230 LFLCSPAAAWISGQVLTVSGGGVQE 254 (256)
T ss_dssp HHHHSGGGTTCCSCEEEESTTSCCC
T ss_pred HHHcCCcccCccCCEEEECCCcccc
Confidence 99997643 3468999998886543
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=210.84 Aligned_cols=217 Identities=12% Similarity=0.092 Sum_probs=152.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||++++++|+++|++|+++ .|+......+.+.++.. + .++.++.+|++|.++
T Consensus 3 l~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 69 (247)
T 2hq1_A 3 LKGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAA---------G----INVVVAKGDVKNPED 69 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHT---------T----CCEEEEESCTTSHHH
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHH
Confidence 456899999999999999999999999999999 67777666665554432 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..++...+++|+.++.++++++.+ .+.++||++||......
T Consensus 70 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~- 148 (247)
T 2hq1_A 70 VENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIMLKQKSGKIINITSIAGIIG- 148 (247)
T ss_dssp HHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECC-------
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhccC-
Confidence 888774 89999999996432 3345566788999999998888753 46789999999754221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|+..|.+++. .|+++++++||++.++...................+.+++++|+|+++
T Consensus 149 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~ 223 (247)
T 2hq1_A 149 -----NAGQANYAASKAGLIGFTKSIAKEFAAKGIYCNAVAPGIIKTDMTDVLPDKVKEMYLNNIPLKRFGTPEEVANVV 223 (247)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred -----CCCCcHhHHHHHHHHHHHHHHHHHHHHcCcEEEEEEEEEEeccchhhcchHHHHHHHhhCCCCCCCCHHHHHHHH
Confidence 12346799999999988752 589999999999987632110000000001112234678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.++. ...+++|++.++.
T Consensus 224 ~~l~~~~~~~~~G~~~~v~gG~ 245 (247)
T 2hq1_A 224 GFLASDDSNYITGQVINIDGGL 245 (247)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHcCcccccccCcEEEeCCCc
Confidence 99997642 2458899998764
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=211.21 Aligned_cols=221 Identities=14% Similarity=0.123 Sum_probs=165.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. ..++.++.+|++|.++
T Consensus 3 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~ 69 (257)
T 3imf_A 3 AMKEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQF-------------PGQILTVQMDVRNTDD 69 (257)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCS-------------TTCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHH
Confidence 356789999999999999999999999999999999998877766554321 2579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 70 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 149 (257)
T 3imf_A 70 IQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKYWIEKGIKGNIINMVATYAWDA 149 (257)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGGSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhCCCcEEEEECchhhccC
Confidence 88776 378999999995422 233455668999999999999883 345679999999876433
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH--------hCCCCEEEEecCCccCCCccccc--ccce-eecccCcccCCccCHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKE--THNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tivRPg~v~gp~~~~~~--~~~~-~~~~~~~~~~~~v~~~D 287 (446)
. .....|+.+|...+.+.+ ..|+++++|+||+++++...... .... .........+.+.+++|
T Consensus 150 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~~gIrvn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 223 (257)
T 3imf_A 150 G------PGVIHSAAAKAGVLAMTKTLAVEWGRKYGIRVNAIAPGPIERTGGADKLWISEEMAKRTIQSVPLGRLGTPEE 223 (257)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCBSSCCCC-------CCSHHHHTTSTTCSCBCHHH
T ss_pred C------CCcHHHHHHHHHHHHHHHHHHHHhccccCeEEEEEEECCCcCCcchhhcccCHHHHHHHHhcCCCCCCcCHHH
Confidence 2 345679999999887754 34999999999999987432110 0000 00011223456789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
+|+++++++.+.. ...|+++++.++....
T Consensus 224 vA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 253 (257)
T 3imf_A 224 IAGLAYYLCSDEAAYINGTCMTMDGGQHLH 253 (257)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTTTSC
T ss_pred HHHHHHHHcCchhcCccCCEEEECCCcccC
Confidence 9999999997653 3468999998886543
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=3.9e-25 Score=212.02 Aligned_cols=214 Identities=14% Similarity=0.114 Sum_probs=159.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 10 ~~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~v 73 (265)
T 2o23_A 10 VKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL------------G----NNCVFAPADVTSEKDV 73 (265)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH------------C----TTEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh------------C----CceEEEEcCCCCHHHH
Confidence 56789999999999999999999999999999999988766654432 1 5689999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------------ccCCCCCcccchHHHHHHHHHHHHhC----------CCCEEE
Q 013273 158 EPALG-------NASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHFI 208 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~v~r~V 208 (446)
+++++ ++|+||||||.... ...++...+++|+.++.++++++... +.++||
T Consensus 74 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv 153 (265)
T 2o23_A 74 QTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVII 153 (265)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEEE
T ss_pred HHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcccccCCCCcEEE
Confidence 88875 89999999996432 22234556889999999999998754 567999
Q ss_pred EEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCccc-C
Q 013273 209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-G 280 (446)
Q Consensus 209 ~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~-~ 280 (446)
++||..+... ......|+.+|...+.+.+ ..|+++++|+||++.++................... +
T Consensus 154 ~isS~~~~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~ 227 (265)
T 2o23_A 154 NTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFPS 227 (265)
T ss_dssp EECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSSC
T ss_pred EeCChhhcCC------CCCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCccccccCHHHHHHHHHcCCCcC
Confidence 9999866332 1345679999999887765 268999999999999874321110000000011112 5
Q ss_pred CccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 013273 281 GQVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~ 314 (446)
.+++++|+|+++++++.++. ..++++++.++..
T Consensus 228 ~~~~~~dva~~~~~l~~~~~-~~G~~i~vdgG~~ 260 (265)
T 2o23_A 228 RLGDPAEYAHLVQAIIENPF-LNGEVIRLDGAIR 260 (265)
T ss_dssp SCBCHHHHHHHHHHHHHCTT-CCSCEEEESTTCC
T ss_pred CCCCHHHHHHHHHHHhhcCc-cCceEEEECCCEe
Confidence 67899999999999998654 6788999987754
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.93 E-value=2.7e-25 Score=213.60 Aligned_cols=217 Identities=15% Similarity=0.143 Sum_probs=150.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|+.|.+++
T Consensus 12 l~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 78 (266)
T 1xq1_A 12 LKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---------G----FQVTGSVCDASLRPER 78 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeeEEEECCCCCHHHH
Confidence 56789999999999999999999999999999999988777666555432 1 4689999999999888
Q ss_pred HHHh--------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~--------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++ ++.+.++||++||..+...
T Consensus 79 ~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~- 157 (266)
T 1xq1_A 79 EKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS- 157 (266)
T ss_dssp HHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC--------
T ss_pred HHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEccchhccC-
Confidence 8876 679999999996432 22234556889999999999988 4567789999999866332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|+..|.+++. .|+++++||||+++++.......... .........+.+++++|+|++
T Consensus 158 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 232 (266)
T 1xq1_A 158 -----ASVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSSL 232 (266)
T ss_dssp --------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHHH
T ss_pred -----CCCCchHHHHHHHHHHHHHHHHHHHhHhCcEEEEEeeCCCccchhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 13345799999999988752 59999999999999985321110000 000011223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.++. ...|++|++.++.
T Consensus 233 ~~~l~~~~~~~~~G~~~~v~gG~ 255 (266)
T 1xq1_A 233 VAFLCMPAASYITGQTICVDGGL 255 (266)
T ss_dssp HHHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHHcCccccCccCcEEEEcCCc
Confidence 999997542 2468899998874
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.6e-25 Score=212.53 Aligned_cols=217 Identities=16% Similarity=0.117 Sum_probs=160.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.++.+.+.+.+... . + .++.++.+|++|.+++
T Consensus 5 ~~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~------~----~~~~~~~~D~~~~~~~ 72 (248)
T 2pnf_A 5 LQGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANK--Y------G----VKAHGVEMNLLSEESI 72 (248)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--H------C----CCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhh--c------C----CceEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988777665555431 0 1 4689999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... ...++...+++|+.++.++++++ ++.+.++||++||.......
T Consensus 73 ~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~- 151 (248)
T 2pnf_A 73 NKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRKMIKQRWGRIVNISSVVGFTGN- 151 (248)
T ss_dssp HHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHHHHHHTCEEEEEECCHHHHHCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhcCCC-
Confidence 88874 89999999996432 12234456889999997777665 44577899999997542211
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...|.+.+ ..|+++++||||+++++...................+.+++++|+|++++
T Consensus 152 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 226 (248)
T 2pnf_A 152 -----VGQVNYSTTKAGLIGFTKSLAKELAPRNVLVNAVAPGFIETDMTAVLSEEIKQKYKEQIPLGRFGSPEEVANVVL 226 (248)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCHHHHHHHHH
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeceecCchhhhccHHHHHHHHhcCCCCCccCHHHHHHHHH
Confidence 234579999999988765 25899999999999988532110000000001122346789999999999
Q ss_pred HHHhCC-CCCCCcEEEEecC
Q 013273 294 CMAKNR-SLSYCKVVEVIAE 312 (446)
Q Consensus 294 ~ll~~~-~~~~~~v~ni~~~ 312 (446)
+++.+. ....|++|++.++
T Consensus 227 ~l~~~~~~~~~G~~~~v~gg 246 (248)
T 2pnf_A 227 FLCSELASYITGEVIHVNGG 246 (248)
T ss_dssp HHHSGGGTTCCSCEEEESTT
T ss_pred HHhCchhhcCCCcEEEeCCC
Confidence 999764 2245889999776
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=8.2e-26 Score=221.23 Aligned_cols=235 Identities=13% Similarity=0.137 Sum_probs=169.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+||||+++++.|+++|++|++++|+.++...+.+++... .+ .++.++.+|++|.++
T Consensus 23 ~l~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~~~~~ 90 (302)
T 1w6u_A 23 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--------TG----NKVHAIQCDVRDPDM 90 (302)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HS----SCEEEEECCTTCHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--------cC----CceEEEEeCCCCHHH
Confidence 356789999999999999999999999999999999988777666555432 01 579999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||..+...
T Consensus 91 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~ 170 (302)
T 1w6u_A 91 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG 170 (302)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEEcccccccC
Confidence 887763 57999999996422 2233455688999999999888853 34579999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccc--cccce-eecccCcccCCccCHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNI-TLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~--~~~~~-~~~~~~~~~~~~v~~~Dv 288 (446)
..+...|+.+|...|.+++. .|+++++||||++++++.... ..... .........+.+++++|+
T Consensus 171 ------~~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dv 244 (302)
T 1w6u_A 171 ------SGFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL 244 (302)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred ------CCCcchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeccCCCcchhhhcccchhhHHHHHhcCCcCCCCCHHHH
Confidence 13456799999999988752 699999999999998732111 10000 000111223457899999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPS 329 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~ 329 (446)
|+++++++.+.. ...|++|++.++...+..++.+.+.++.+
T Consensus 245 a~~~~~l~~~~~~~~~G~~~~v~gg~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 245 ANLAAFLCSDYASWINGAVIKFDGGEEVLISGEFNDLRKVTK 286 (302)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTHHHHHHSTTGGGGGCCH
T ss_pred HHHHHHHcCCcccccCCCEEEECCCeeeccCCccccchhhcc
Confidence 999999997543 23588999998865555555555555543
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=211.23 Aligned_cols=209 Identities=18% Similarity=0.192 Sum_probs=158.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+.+. .++.++.+|++|.+++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v 68 (260)
T 1nff_A 5 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW 68 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----------------cCceEEEecCCCHHHH
Confidence 456899999999999999999999999999999999877665443221 3488999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++ ++.+.++||++||..+....
T Consensus 69 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 147 (260)
T 1nff_A 69 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT- 147 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEeehhhcCCC-
Confidence 88875 89999999996432 22234556889999997776665 44567899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...|.+.+ ..|+++++||||+++++...... ..+ . ....+.+++++|+|++++
T Consensus 148 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~-~~~--~--~~~~~~~~~~~dvA~~v~ 217 (260)
T 1nff_A 148 -----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVP-EDI--F--QTALGRAAEPVEVSNLVV 217 (260)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSC-TTC--S--CCSSSSCBCHHHHHHHHH
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCCCCccccch-hhH--H--hCccCCCCCHHHHHHHHH
Confidence 234579999999998765 26999999999999998532110 011 0 122346789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.+.. ...|++|++.++.
T Consensus 218 ~l~s~~~~~~~G~~~~v~gG~ 238 (260)
T 1nff_A 218 YLASDESSYSTGAEFVVDGGT 238 (260)
T ss_dssp HHHSGGGTTCCSCEEEESTTG
T ss_pred HHhCccccCCcCCEEEECCCe
Confidence 9997643 2358899998874
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=4.2e-25 Score=214.45 Aligned_cols=219 Identities=16% Similarity=0.155 Sum_probs=162.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc------------hhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV------------QRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~------------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+. +....+.+.++.. + .++
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 73 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKT---------G----RRC 73 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHT---------T----CCE
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhc---------C----CeE
Confidence 35678999999999999999999999999999999973 3334333333321 2 679
Q ss_pred EEEEcCCCChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEE
Q 013273 145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHF 207 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~ 207 (446)
.++.+|++|.++++++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++|
T Consensus 74 ~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~i 153 (281)
T 3s55_A 74 ISAKVDVKDRAALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPGMIKRNYGRI 153 (281)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEE
Confidence 999999999998888763 89999999996432 233445668899999999999863 4566799
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc---cc--ce---e-
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---TH--NI---T- 271 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~---~~--~~---~- 271 (446)
|++||....... .....|+.+|+..+.+.+ ..|+++++|+||+++++...... .. .. .
T Consensus 154 v~isS~~~~~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~ 227 (281)
T 3s55_A 154 VTVSSMLGHSAN------FAQASYVSSKWGVIGLTKCAAHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTL 227 (281)
T ss_dssp EEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCH
T ss_pred EEECChhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCccccchhhhccccccccccch
Confidence 999998764432 345679999999998775 26899999999999998532100 00 00 0
Q ss_pred ------ecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 272 ------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 272 ------~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+.......+.+++++|+|+++++++.+.. ...|++|+|.++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~p~dvA~~v~~L~s~~~~~itG~~i~vdgG~~ 277 (281)
T 3s55_A 228 KDVESVFASLHLQYAPFLKPEEVTRAVLFLVDEASSHITGTVLPIDAGAT 277 (281)
T ss_dssp HHHHHHHHHHCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred hHHHHHHHhhhccCcCCCCHHHHHHHHHHHcCCcccCCCCCEEEECCCcc
Confidence 00111223578999999999999998653 24589999988754
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=2.3e-25 Score=213.80 Aligned_cols=220 Identities=13% Similarity=0.111 Sum_probs=164.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 12 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~~ 78 (260)
T 2zat_A 12 LENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGE---------G----LSVTGTVCHVGKAEDR 78 (260)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999988777665555432 1 5688999999999888
Q ss_pred HHHhc-------CCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||... .+..+++..+++|+.++.++++++. +.+.++||++||..+...
T Consensus 79 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 157 (260)
T 2zat_A 79 ERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVPEMEKRGGGSVLIVSSVGAYHP- 157 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEechhhcCC-
Confidence 87764 8999999999642 1222345568899999999988874 457789999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccc--cccceeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~--~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+. .|+++++|+||++.++..... ..............+.+++++|+|+
T Consensus 158 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 232 (260)
T 2zat_A 158 -----FPNLGPYNVSKTALLGLTKNLAVELAPRNIRVNCLAPGLIKTNFSQVLWMDKARKEYMKESLRIRRLGNPEDCAG 232 (260)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSTTHHHHSSHHHHHHHHHHHTCSSCBCGGGGHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcccCccchhcccChHHHHHHHhcCCCCCCCCHHHHHH
Confidence 13456799999999988762 589999999999998742210 0000000001112346789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
++++++.++. ...+++|++.++...+
T Consensus 233 ~v~~l~s~~~~~~tG~~~~vdgG~~~s 259 (260)
T 2zat_A 233 IVSFLCSEDASYITGETVVVGGGTASR 259 (260)
T ss_dssp HHHHHTSGGGTTCCSCEEEESTTCCCC
T ss_pred HHHHHcCcccCCccCCEEEECCCcccc
Confidence 9999997653 2468899998886543
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=3.3e-25 Score=211.09 Aligned_cols=216 Identities=17% Similarity=0.159 Sum_probs=158.4
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
....+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+. .++.++.+|++|.+
T Consensus 10 ~~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~ 73 (249)
T 3f9i_A 10 IDLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----------------DNYTIEVCNLANKE 73 (249)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----------------SSEEEEECCTTSHH
T ss_pred ccCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----------------cCccEEEcCCCCHH
Confidence 34677899999999999999999999999999999999887776654331 57899999999999
Q ss_pred cHHHHhc---CCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 156 QIEPALG---NASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 156 ~~~~a~~---~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++.++++ ++|+||||||... ....+++..+++|+.++.++++++. +.+.++||++||..+....
T Consensus 74 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 150 (249)
T 3f9i_A 74 ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQKRYGRIINISSIVGIAGN--- 150 (249)
T ss_dssp HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCC--CC---
T ss_pred HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEccHHhccCC---
Confidence 9998885 6899999999643 2334556678999999999988874 3466799999998764322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++...................+.+++++|+|++++++
T Consensus 151 ---~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l 227 (249)
T 3f9i_A 151 ---PGQANYCASKAGLIGMTKSLSYEVATRGITVNAVAPGFIKSDMTDKLNEKQREAIVQKIPLGTYGIPEDVAYAVAFL 227 (249)
T ss_dssp ---SCSHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBC------CCHHHHHHHHHHCTTCSCBCHHHHHHHHHHH
T ss_pred ---CCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCccccCcccccCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 345679999999987765 2689999999999998743211100000011122345688999999999999
Q ss_pred HhCCC-CCCCcEEEEecCC
Q 013273 296 AKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~ 313 (446)
+.++. ...|++|++.++.
T Consensus 228 ~s~~~~~~tG~~~~vdgG~ 246 (249)
T 3f9i_A 228 ASNNASYITGQTLHVNGGM 246 (249)
T ss_dssp HSGGGTTCCSCEEEESTTS
T ss_pred cCCccCCccCcEEEECCCE
Confidence 98653 2468999998774
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=217.80 Aligned_cols=222 Identities=15% Similarity=0.112 Sum_probs=166.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. ...++.++.+|++|.++
T Consensus 38 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dv~d~~~ 105 (293)
T 3rih_A 38 DLSARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGEL------------GAGNVIGVRLDVSDPGS 105 (293)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTS------------SSSCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh------------CCCcEEEEEEeCCCHHH
Confidence 356789999999999999999999999999999999998888776655432 12579999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......+
T Consensus 106 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iV~isS~~~~~~~ 185 (293)
T 3rih_A 106 CADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAPLTASGRGRVILTSSITGPVTG 185 (293)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHSSCEEEEECCSBTTTBB
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEeChhhccCC
Confidence 87765 478999999996532 223345668899999999999883 5567899999997653222
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|..++.+.+ ..|+++++|+||+++++...................+.+..++|+|+++
T Consensus 186 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v 260 (293)
T 3rih_A 186 -----YPGWSHYGASKAAQLGFMRTAAIELAPRGVTVNAILPGNILTEGLVDMGEEYISGMARSIPMGMLGSPVDIGHLA 260 (293)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHTCHHHHHHHHTTSTTSSCBCHHHHHHHH
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCCcCcchhhccHHHHHHHHhcCCCCCCCCHHHHHHHH
Confidence 1345679999999998876 2699999999999998742211100000011122344578999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
++++.+.. ...|++|+|.++...
T Consensus 261 ~fL~s~~a~~itG~~i~vdGG~~~ 284 (293)
T 3rih_A 261 AFLATDEAGYITGQAIVVDGGQVL 284 (293)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTC
T ss_pred HHHhCccccCCCCCEEEECCCccC
Confidence 99997643 346899999887643
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=5.3e-25 Score=209.40 Aligned_cols=218 Identities=12% Similarity=0.072 Sum_probs=165.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 69 (247)
T 3lyl_A 3 LNEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEK---------G----FKARGLVLNISDIESI 69 (247)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEecCCCHHHH
Confidence 45789999999999999999999999999999999998888777666542 2 5799999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||......
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-- 147 (247)
T 3lyl_A 70 QNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRGMMKKRWGRIISIGSVVGSAG-- 147 (247)
T ss_dssp HHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccC--
Confidence 8876 368999999996532 2234456688999999999988753 45579999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+.+++|+|++++
T Consensus 148 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~i~ 223 (247)
T 3lyl_A 148 ----NPGQTNYCAAKAGVIGFSKSLAYEVASRNITVNVVAPGFIATDMTDKLTDEQKSFIATKIPSGQIGEPKDIAAAVA 223 (247)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTTSCHHHHHHHHTTSTTCCCBCHHHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCcEecccchhccHHHHHHHhhcCCCCCCcCHHHHHHHHH
Confidence 1345679999998887765 36899999999999987432211111111112233456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++.+.. ...|++|++.++..
T Consensus 224 ~l~s~~~~~~tG~~i~vdgG~~ 245 (247)
T 3lyl_A 224 FLASEEAKYITGQTLHVNGGMY 245 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTSS
T ss_pred HHhCCCcCCccCCEEEECCCEe
Confidence 9997643 34689999987753
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=211.08 Aligned_cols=217 Identities=16% Similarity=0.149 Sum_probs=163.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 7 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 73 (260)
T 2ae2_A 7 LEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---------G----FKVEASVCDLSSRSER 73 (260)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CEEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHHH
Confidence 46789999999999999999999999999999999988777666555432 1 5789999999999988
Q ss_pred HHHh--------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~--------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||..+...
T Consensus 74 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 152 (260)
T 2ae2_A 74 QELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA- 152 (260)
T ss_dssp HHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-
Confidence 8877 579999999996432 223345568899999999998884 456789999999866332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccc-cccce-e---ecccCcccCCccCHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETHNI-T---LSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~-~~~~~-~---~~~~~~~~~~~v~~~D 287 (446)
......|+.+|...|.+.+. .|+++++|+||+++++..... ..... . ........+.+++++|
T Consensus 153 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 227 (260)
T 2ae2_A 153 -----VPYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPKE 227 (260)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHHH
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCCCCCcchhhhccChhhHHHHHHHHhcCCCCCCCCHHH
Confidence 13346799999999988762 589999999999988732110 00000 0 0001122356789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...|+++++.++.
T Consensus 228 vA~~v~~l~s~~~~~~tG~~~~vdgG~ 254 (260)
T 2ae2_A 228 LAAMVAFLCFPAASYVTGQIIYVDGGL 254 (260)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHcCccccCCCCCEEEECCCc
Confidence 9999999997643 2468899998774
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.93 E-value=6e-25 Score=208.93 Aligned_cols=215 Identities=15% Similarity=0.102 Sum_probs=159.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||++++++|+++|++|++++|+.++...+.+.+.. ....++.++.+|++|.+++++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~------------~~~~~~~~~~~D~~~~~~~~~ 69 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWH------------AYADKVLRVRADVADEGDVNA 69 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHST------------TTGGGEEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH------------hcCCcEEEEEecCCCHHHHHH
Confidence 47899999999999999999999999999999998777665544310 011578999999999999888
Q ss_pred Hhc-------CCCEEEEcccCCCCc---------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 160 ALG-------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~~---------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++ ++|+||||||..... ..+++..+++|+.++.++++++. +.+.++||++||..+....
T Consensus 70 ~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 149 (250)
T 2cfc_A 70 AIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAVLPHMLLQGAGVIVNIASVASLVAF 149 (250)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC
Confidence 874 899999999964321 12344567899999988777664 4477899999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccc-cccccee-ecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAY-KETHNIT-LSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~-~~~~~~~-~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...|.+++. .|+++++||||+++++.... .....+. ........+.+++++|+|+
T Consensus 150 ------~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~ 223 (250)
T 2cfc_A 150 ------PGRSAYTTSKGAVLQLTKSVAVDYAGSGIRCNAVCPGMIETPMTQWRLDQPELRDQVLARIPQKEIGTAAQVAD 223 (250)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTTHHHHTSHHHHHHHHTTCTTCSCBCHHHHHH
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCccCccccccCCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 3456799999999988752 49999999999999986432 1100000 0001122345789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.++. ...|++|++.++
T Consensus 224 ~~~~l~~~~~~~~~G~~~~v~gG 246 (250)
T 2cfc_A 224 AVMFLAGEDATYVNGAALVMDGA 246 (250)
T ss_dssp HHHHHHSTTCTTCCSCEEEESTT
T ss_pred HHHHHcCchhhcccCCEEEECCc
Confidence 9999998754 245889998776
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.8e-25 Score=208.44 Aligned_cols=213 Identities=16% Similarity=0.111 Sum_probs=159.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||+++++.|+++|++|++++|+.++.+.+.+++ .+++++.+|++|.+++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~ 67 (244)
T 3d3w_A 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----------------PGIEPVCVDLGDWEAT 67 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc-----------------CCCCEEEEeCCCHHHH
Confidence 45689999999999999999999999999999999987665543211 3567889999999999
Q ss_pred HHHhc---CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCCCchh
Q 013273 158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~~---~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++++ ++|+||||||.... ...++...+++|+.++.++++++.+. + .++||++||..+...
T Consensus 68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~----- 142 (244)
T 3d3w_A 68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRA----- 142 (244)
T ss_dssp HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC-----
T ss_pred HHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEeCchhhccC-----
Confidence 99885 58999999996432 12234556889999999999888643 4 679999999876432
Q ss_pred hhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
..+...|+.+|+.+|.+++. .|+++++||||+++++...... .... .........+.+++++|+|+++++
T Consensus 143 -~~~~~~Y~~sK~a~~~~~~~la~e~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 221 (244)
T 3d3w_A 143 -VTNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF 221 (244)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTTTHHHHSCSTTHHHHHHHTCTTCSCBCHHHHHHHHHH
T ss_pred -CCCCchHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccccccchhhhccChHHHHHHHhhCCCCCCcCHHHHHHHHHH
Confidence 13456799999999988752 5899999999999998532110 0000 000011223568999999999999
Q ss_pred HHhCCC-CCCCcEEEEecCC
Q 013273 295 MAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.+.. ...|++|++.++.
T Consensus 222 l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 3d3w_A 222 LLSDRSGMTTGSTLPVEGGF 241 (244)
T ss_dssp HHSGGGTTCCSCEEEESTTG
T ss_pred HcCccccCCCCCEEEECCCc
Confidence 997642 2468899998763
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-25 Score=211.26 Aligned_cols=214 Identities=14% Similarity=0.095 Sum_probs=162.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+.+. .++.++.+|++|.+++
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~v 70 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLG----------------DNGKGMALNVTNPESI 70 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceEEEEeCCCHHHH
Confidence 567899999999999999999999999999999999887776655432 3578899999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||......
T Consensus 71 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-- 148 (248)
T 3op4_A 71 EAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMG-- 148 (248)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhcCC--
Confidence 88774 89999999996432 2334566789999999999998853 46679999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+.+++|+|++++
T Consensus 149 ----~~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~ 224 (248)
T 3op4_A 149 ----NAGQANYAAAKAGVIGFTKSMAREVASRGVTVNTVAPGFIETDMTKALNDEQRTATLAQVPAGRLGDPREIASAVA 224 (248)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSTTTTTSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHHHHhCeEEEEEeeCCCCCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1345679999999887765 36899999999999987432111000000111223456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.+.. ...|+++++.++.
T Consensus 225 ~L~s~~~~~itG~~i~vdgG~ 245 (248)
T 3op4_A 225 FLASPEAAYITGETLHVNGGM 245 (248)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHcCCccCCccCcEEEECCCe
Confidence 9997653 3468999998764
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.3e-26 Score=216.75 Aligned_cols=207 Identities=15% Similarity=0.148 Sum_probs=153.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++||||||+||||++++++|+++|++|++++|+.++.. . .+.+|+.|.+++++
T Consensus 1 Mk~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~-----------------------~---~~~~D~~~~~~~~~ 54 (255)
T 2dkn_A 1 MSVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE-----------------------A---DLSTPGGRETAVAA 54 (255)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C---CTTSHHHHHHHHHH
T ss_pred CcEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc-----------------------c---cccCCcccHHHHHH
Confidence 368999999999999999999999999999999875321 1 15689999998988
Q ss_pred Hhc----CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccCCCCch---------
Q 013273 160 ALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFGFPA--------- 222 (446)
Q Consensus 160 a~~----~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~~~~~~--------- 222 (446)
+++ ++|+||||||.... ..++...+++|+.++.++++++.+. +.+|||++||..+.......
T Consensus 55 ~~~~~~~~~d~vi~~Ag~~~~-~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~~~~~~ 133 (255)
T 2dkn_A 55 VLDRCGGVLDGLVCCAGVGVT-AANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAELPMVEAMLA 133 (255)
T ss_dssp HHHHHTTCCSEEEECCCCCTT-SSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGCHHHHHHHH
T ss_pred HHHHcCCCccEEEECCCCCCc-chhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEeccccccccccccchhhhhcc
Confidence 875 89999999996542 2345667899999999999987653 66899999998774432100
Q ss_pred -----------hhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccc-ccc--ceeecc-cCcccC
Q 013273 223 -----------AILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYK-ETH--NITLSQ-EDTLFG 280 (446)
Q Consensus 223 -----------~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~-~~~--~~~~~~-~~~~~~ 280 (446)
....+...|+.+|+.+|.+++. .|+++++||||+++|+..... ... ...... .. ..+
T Consensus 134 ~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~-~~~ 212 (255)
T 2dkn_A 134 GDEARAIELAEQQGQTHLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQASKADPRYGESTRRFVA-PLG 212 (255)
T ss_dssp TCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHHHHHHCTTTHHHHHSCCC-TTS
T ss_pred cchhhhhhhccccCCcchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhhhcccchhhHHHHHHHHH-Hhc
Confidence 0013567899999999988763 699999999999999843211 000 000000 01 345
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
.+++++|+|+++++++.++. ...+++|++.++..
T Consensus 213 ~~~~~~dva~~~~~l~~~~~~~~~G~~~~v~gg~~ 247 (255)
T 2dkn_A 213 RGSEPREVAEAIAFLLGPQASFIHGSVLFVDGGMD 247 (255)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTHH
T ss_pred CCCCHHHHHHHHHHHhCCCcccceeeEEEecCCeE
Confidence 68999999999999998752 24588999988754
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=211.03 Aligned_cols=215 Identities=13% Similarity=0.024 Sum_probs=158.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ ..++.++.+|++|.+++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~~ 66 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL----------------GDAARYQHLDVTIEEDW 66 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT----------------GGGEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh----------------CCceeEEEecCCCHHHH
Confidence 45689999999999999999999999999999999987666543321 14688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||..+....
T Consensus 67 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 145 (254)
T 1hdc_A 67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL- 145 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccCC-
Confidence 88774 89999999996432 22334566889999998665554 45567899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCcc-CHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV-SNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v-~~~DvA~ai 292 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++...................+.+. +++|+|+++
T Consensus 146 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~dvA~~v 220 (254)
T 1hdc_A 146 -----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV 220 (254)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecccCcCccccccchhHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 345679999999998765 2689999999999998742211000000000111234567 999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++.++. ...|+++++.++..
T Consensus 221 ~~l~s~~~~~~tG~~~~vdgG~~ 243 (254)
T 1hdc_A 221 VKLLSDTSSYVTGAELAVDGGWT 243 (254)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHhCchhcCCCCCEEEECCCcc
Confidence 99997643 34688999887753
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=4.9e-25 Score=209.88 Aligned_cols=217 Identities=12% Similarity=0.099 Sum_probs=159.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|+++|++|++++| +.++.+.+.++++.. + .++.++.+|++|.++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 68 (246)
T 2uvd_A 2 LKGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKL---------G----SDAIAVRADVANAED 68 (246)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHH
Confidence 45689999999999999999999999999999999 777766665555432 1 568999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 69 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (246)
T 2uvd_A 69 VTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRFMMRQRHGRIVNIASVVGVTGN 148 (246)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCHHhcCCC
Confidence 888764 79999999996432 223345668899999888777764 4567899999997653221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++...................+.+++++|+|+++
T Consensus 149 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~ 222 (246)
T 2uvd_A 149 ------PGQANYVAAKAGVIGLTKTSAKELASRNITVNAIAPGFIATDMTDVLDENIKAEMLKLIPAAQFGEAQDIANAV 222 (246)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBGGGCSSCCCTTHHHHHHHTCTTCSCBCHHHHHHHH
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeccccCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 234679999999887754 3699999999999987632111000000000112234678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.++. ...|++|++.++.
T Consensus 223 ~~l~s~~~~~~tG~~~~vdgG~ 244 (246)
T 2uvd_A 223 TFFASDQSKYITGQTLNVDGGM 244 (246)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHcCchhcCCCCCEEEECcCc
Confidence 99997643 3468899887763
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.4e-25 Score=210.32 Aligned_cols=219 Identities=14% Similarity=0.127 Sum_probs=160.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... .+ ..++.++.+|++|.+++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~---~~~~~~~~~D~~~~~~v 73 (260)
T 2z1n_A 5 IQGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASL--------VS---GAQVDIVAGDIREPGDI 73 (260)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------ST---TCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc--------CC---CCeEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999988777666555421 00 13689999999999999
Q ss_pred HHHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||..+....
T Consensus 74 ~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 151 (260)
T 2z1n_A 74 DRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMVEKGWGRMVYIGSVTLLRPW-- 151 (260)
T ss_dssp HHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhcCCC--
Confidence 88875 59999999996432 223455668899999988777764 4577899999998764321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc----------ccccc-eeecccCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY----------KETHN-ITLSQEDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~----------~~~~~-~~~~~~~~~~~~~v 283 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++.... ..... ..........+.++
T Consensus 152 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 227 (260)
T 2z1n_A 152 ----QDLALSNIMRLPVIGVVRTLALELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALKSMASRIPMGRVG 227 (260)
T ss_dssp ----TTBHHHHHHTHHHHHHHHHHHHHHGGGTEEEEEEEECHHHHCCCC-----------------------CCTTSSCC
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHHHHHhcCCCCCcc
Confidence 335679999999988765 259999999999999874320 00000 00001112234578
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+|+++++++.+.. ...|+++++.++.
T Consensus 228 ~~~dva~~v~~l~s~~~~~~tG~~i~vdGG~ 258 (260)
T 2z1n_A 228 KPEELASVVAFLASEKASFITGAVIPVDGGA 258 (260)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 99999999999997642 3468899887763
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.8e-25 Score=210.41 Aligned_cols=213 Identities=16% Similarity=0.060 Sum_probs=158.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.++...+.++ . .+++++.+|++|.+++
T Consensus 5 ~~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~--------------~~~~~~~~D~~~~~~~ 67 (244)
T 1cyd_A 5 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C--------------PGIEPVCVDLGDWDAT 67 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S--------------TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c--------------cCCCcEEecCCCHHHH
Confidence 4568999999999999999999999999999999998766544321 1 3567889999999999
Q ss_pred HHHhc---CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCCCchh
Q 013273 158 EPALG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~~---~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++++ ++|+||||||.... ...++...+++|+.++.++++++.+. + .++||++||..+....
T Consensus 68 ~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~---- 143 (244)
T 1cyd_A 68 EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF---- 143 (244)
T ss_dssp HHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEEcchhhcCCC----
Confidence 99885 57999999996432 12234556889999999999888653 5 5799999998764322
Q ss_pred hhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...|.+++. .|+++++||||+++++...... ...+ .........+.+++++|+|+++++
T Consensus 144 --~~~~~Y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 221 (244)
T 1cyd_A 144 --PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF 221 (244)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred --CCcchhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCccccccccCHHHHHHHHhcCCccCCCCHHHHHHHHHH
Confidence 3356799999999988762 6899999999999997432110 0000 000011223578999999999999
Q ss_pred HHhCCC-CCCCcEEEEecCC
Q 013273 295 MAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.++. ...++++++.++.
T Consensus 222 l~~~~~~~~~G~~~~v~gG~ 241 (244)
T 1cyd_A 222 LLSDRSASTSGGGILVDAGY 241 (244)
T ss_dssp HHSGGGTTCCSSEEEESTTG
T ss_pred HhCchhhcccCCEEEECCCc
Confidence 997653 2457888887763
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=5.2e-25 Score=211.53 Aligned_cols=218 Identities=16% Similarity=0.204 Sum_probs=164.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|+++|++|+++ .|+.++...+.++++.. + .++.++.+|++|.++
T Consensus 2 ~~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~ 68 (258)
T 3oid_A 2 EQNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKL---------G----VKVLVVKANVGQPAK 68 (258)
T ss_dssp -CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHH
Confidence 456899999999999999999999999999997 88888777766665432 2 579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.+....
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~- 147 (258)
T 3oid_A 69 IKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKLMEKNGGGHIVSISSLGSIRY- 147 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEEEEGGGTSB-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECchhhCCC-
Confidence 88776 467999999995422 223345568899999999998884 456679999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-c-eeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++........ . ..........+.+.+++|+|+
T Consensus 148 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 222 (258)
T 3oid_A 148 -----LENYTTVGVSKAALEALTRYLAVELSPKQIIVNAVSGGAIDTDALKHFPNREDLLEDARQNTPAGRMVEIKDMVD 222 (258)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECCBCSGGGGGCTTHHHHHHHHHHHCTTSSCBCHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcChhhhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 2345689999999998876 2589999999999998743211100 0 000011223456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++++.+.. ...|++++|.++..
T Consensus 223 ~v~~L~s~~~~~itG~~i~vdGG~~ 247 (258)
T 3oid_A 223 TVEFLVSSKADMIRGQTIIVDGGRS 247 (258)
T ss_dssp HHHHHTSSTTTTCCSCEEEESTTGG
T ss_pred HHHHHhCcccCCccCCEEEECCCcc
Confidence 9999998754 35689999988754
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.93 E-value=2.6e-25 Score=214.16 Aligned_cols=216 Identities=15% Similarity=0.132 Sum_probs=161.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+||||++++++|+++|++|++++| +.++.+.+.++++.. + .++.++.+|++|.++
T Consensus 19 ~~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 85 (274)
T 1ja9_A 19 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---------G----AQGVAIQADISKPSE 85 (274)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc---------C----CcEEEEEecCCCHHH
Confidence 56789999999999999999999999999999999 666666655554432 1 578999999999999
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~ 220 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++.+. + ++||++||..+...+
T Consensus 86 ~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~~- 163 (274)
T 1ja9_A 86 VVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRG-GRIILTSSIAAVMTG- 163 (274)
T ss_dssp HHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEE-EEEEEECCGGGTCCS-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-CEEEEEcChHhccCC-
Confidence 888775 89999999996432 22234556889999999999998765 4 699999998764111
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc---------cc---ce-eecccCcccC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE---------TH---NI-TLSQEDTLFG 280 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~---------~~---~~-~~~~~~~~~~ 280 (446)
......|+.+|+.+|.+++. .|+++++||||+++++...... .. .. .........+
T Consensus 164 ----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (274)
T 1ja9_A 164 ----IPNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK 239 (274)
T ss_dssp ----CCSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHhcCCCC
Confidence 13345799999999988762 5999999999999987422100 00 00 0000112235
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.+++++|+|+++++++.++. ...|++|+|.++
T Consensus 240 ~~~~~~dva~~i~~l~~~~~~~~~G~~~~v~gG 272 (274)
T 1ja9_A 240 RIGYPADIGRAVSALCQEESEWINGQVIKLTGG 272 (274)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CccCHHHHHHHHHHHhCcccccccCcEEEecCC
Confidence 68999999999999997643 235889999876
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.92 E-value=6.1e-25 Score=210.69 Aligned_cols=220 Identities=17% Similarity=0.110 Sum_probs=167.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||++++++|+++|++|++++|+.++.+.+.+++. .++.++.+|++|.+++
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v 69 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFG----------------PRVHALRSDIADLNEI 69 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhC----------------CcceEEEccCCCHHHH
Confidence 567899999999999999999999999999999999887776654331 5789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.......
T Consensus 70 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 146 (255)
T 4eso_A 70 AVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADEGGH--- 146 (255)
T ss_dssp HHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGSSBC---
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhcCCC---
Confidence 7665 478999999996532 23345566899999999999999764 23589999998764321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc------eeecccCcccCCccCHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN------ITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~------~~~~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++......... ..........+.+.+++|+|
T Consensus 147 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA 223 (255)
T 4eso_A 147 ---PGMSVYSASKAALVSFASVLAAELLPRGIRVNSVSPGFIDTPTKGVAGITEAERAEFKTLGDNITPMKRNGTADEVA 223 (255)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEEECSBCCSSTTCTTSCHHHHHHHHHHHHHHSTTSSCBCHHHHH
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEecCcccCcccccccCChhhHHHHHHHHhccCCCCCCcCHHHHH
Confidence 345679999999998875 25899999999999988432110000 00001122345678999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhh
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTP 319 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~ 319 (446)
+++++++.+.....|+++++.++...++.+
T Consensus 224 ~~v~~L~s~~~~itG~~i~vdGG~~~~l~~ 253 (255)
T 4eso_A 224 RAVLFLAFEATFTTGAKLAVDGGLGQKLST 253 (255)
T ss_dssp HHHHHHHHTCTTCCSCEEEESTTTTTTBCC
T ss_pred HHHHHHcCcCcCccCCEEEECCCccccCcC
Confidence 999999987444579999999887665544
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=210.65 Aligned_cols=215 Identities=16% Similarity=0.145 Sum_probs=163.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||+++++.|+++|++|++++| +......+.+.++.. + .++.++.+|++|.++
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~d~~~ 92 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAA---------G----GEAFAVKADVSQESE 92 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHH
Confidence 56789999999999999999999999999999998 555556555555432 2 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 93 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 172 (269)
T 4dmm_A 93 VEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKIMLKQRSGRIINIASVVGEMGN 172 (269)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhcCCC
Confidence 887764 79999999996532 233455678899999999998874 3466799999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+..+.+.+ ..|+++++|+||+++++....... .........+.+.+++|+|+++
T Consensus 173 ------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~---~~~~~~~p~~r~~~~~dvA~~v 243 (269)
T 4dmm_A 173 ------PGQANYSAAKAGVIGLTKTVAKELASRGITVNAVAPGFIATDMTSELAA---EKLLEVIPLGRYGEAAEVAGVV 243 (269)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBTTSCSCHHHH---HHHGGGCTTSSCBCHHHHHHHH
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHhhhCcEEEEEEECCCcCcccccccH---HHHHhcCCCCCCCCHHHHHHHH
Confidence 335679999999887765 369999999999999885321111 0011122345678999999999
Q ss_pred HHHHhCCC--CCCCcEEEEecCCC
Q 013273 293 ACMAKNRS--LSYCKVVEVIAETT 314 (446)
Q Consensus 293 ~~ll~~~~--~~~~~v~ni~~~~~ 314 (446)
++++.++. ...|++|+|.++..
T Consensus 244 ~~l~s~~~~~~itG~~i~vdGG~~ 267 (269)
T 4dmm_A 244 RFLAADPAAAYITGQVINIDGGLV 267 (269)
T ss_dssp HHHHHCGGGGGCCSCEEEESTTSC
T ss_pred HHHhCCcccCCCcCCEEEECCCee
Confidence 99998742 34689999987753
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.1e-25 Score=213.99 Aligned_cols=218 Identities=15% Similarity=0.166 Sum_probs=163.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+.++++|||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.++
T Consensus 21 m~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~ 87 (279)
T 3sju_A 21 MSRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAA---------G----HDVDGSSCDVTSTDE 87 (279)
T ss_dssp ----CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------T----CCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHH
Confidence 567789999999999999999999999999999999998888777666532 2 579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh------CCCCEEEEEccccccC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~------~~v~r~V~vSS~~~~~ 217 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||.....
T Consensus 88 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~g~iV~isS~~~~~ 167 (279)
T 3sju_A 88 VHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRAGGMREAGWGRIVNIASTGGKQ 167 (279)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSSHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhchhhHhhcCCcEEEEECChhhcc
Confidence 88776 478999999996432 2233455678999999999998755 4667999999987643
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----------cceeecccCccc
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLF 279 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----------~~~~~~~~~~~~ 279 (446)
.. .....|+.+|..++.+.+ ..|+++++|+||++.++....... ............
T Consensus 168 ~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 241 (279)
T 3sju_A 168 GV------MYAAPYTASKHGVVGFTKSVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNAKIPL 241 (279)
T ss_dssp CC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHTTCTT
T ss_pred CC------CCChhHHHHHHHHHHHHHHHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHhcCCC
Confidence 22 335679999999988775 268999999999998873211000 000000112234
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+.+++|+|+++++++.+.. ...|++++|.++.
T Consensus 242 ~r~~~pedvA~~v~~L~s~~a~~itG~~i~vdGG~ 276 (279)
T 3sju_A 242 GRYSTPEEVAGLVGYLVTDAAASITAQALNVCGGL 276 (279)
T ss_dssp SSCBCHHHHHHHHHHHTSSGGGGCCSCEEEESTTC
T ss_pred CCCCCHHHHHHHHHHHhCccccCcCCcEEEECCCc
Confidence 567899999999999998653 3468999998774
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.2e-25 Score=211.26 Aligned_cols=207 Identities=14% Similarity=0.106 Sum_probs=158.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+||||+++++.|+++|++|++++|+..... ..++.++.+|++|.+++
T Consensus 26 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----------------------~~~~~~~~~Dv~d~~~v 83 (260)
T 3un1_A 26 NQQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSA----------------------DPDIHTVAGDISKPETA 83 (260)
T ss_dssp TTCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCS----------------------STTEEEEESCTTSHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhcc----------------------cCceEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999875321 14799999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.|+.++++++ ++.+.++||++||..+....
T Consensus 84 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~- 162 (260)
T 3un1_A 84 DRIVREGIERFGRIDSLVNNAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPM- 162 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCB-
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCC-
Confidence 88774 89999999996432 22345566889999999999988 45677899999997653211
Q ss_pred chhhhchhhHHHHHHHHHHHHHH----h---CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~----~---~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
...+...|+.+|...+.+.+ + .|+++++|+||+++++..... ...........+.+.+++|+|++++
T Consensus 163 ---~~~~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~---~~~~~~~~~p~~r~~~~~dva~av~ 236 (260)
T 3un1_A 163 ---VGMPSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPAE---THSTLAGLHPVGRMGEIRDVVDAVL 236 (260)
T ss_dssp ---TTCCCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCGG---GHHHHHTTSTTSSCBCHHHHHHHHH
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCHH---HHHHHhccCCCCCCcCHHHHHHHHH
Confidence 12344679999999998876 2 589999999999999853211 0011112233456789999999999
Q ss_pred HHHhCCCCCCCcEEEEecCCC
Q 013273 294 CMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~~ 314 (446)
++..... ..|++|+|.++..
T Consensus 237 ~L~~~~~-itG~~i~vdGG~~ 256 (260)
T 3un1_A 237 YLEHAGF-ITGEILHVDGGQN 256 (260)
T ss_dssp HHHHCTT-CCSCEEEESTTGG
T ss_pred HhcccCC-CCCcEEEECCCee
Confidence 9955443 5789999988753
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.92 E-value=3.9e-25 Score=209.47 Aligned_cols=215 Identities=16% Similarity=0.099 Sum_probs=158.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++||||||+||||++++++|+++|++|+++ .|+.++.+.+.++++.. + .++.++.+|++|.++++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~~ 67 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---------G----GQAITFGGDVSKEADVE 67 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------T----CEEEEEECCTTSHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CcEEEEeCCCCCHHHHH
Confidence 3689999999999999999999999999995 78877777666555432 1 57899999999999988
Q ss_pred HHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCCc
Q 013273 159 PALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ ++|+||||||.... ...++...+++|+.++.++++++.+ .+.++||++||.......
T Consensus 68 ~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~-- 145 (244)
T 1edo_A 68 AMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN-- 145 (244)
T ss_dssp HHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC--
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCEEEEECChhhcCCC--
Confidence 8774 79999999996532 2233455688999999999988865 367899999997553221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++...................+.+++++|+|+++++
T Consensus 146 ----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ 221 (244)
T 1edo_A 146 ----IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEF 221 (244)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHH
T ss_pred ----CCCccchhhHHHHHHHHHHHHHHhhhcCCEEEEEeeCccccchhhhcChHHHHHHhhcCCCCCCCCHHHHHHHHHH
Confidence 234679999999887765 268999999999999874211100000000011223457899999999999
Q ss_pred HHhCCC--CCCCcEEEEecCC
Q 013273 295 MAKNRS--LSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~--~~~~~v~ni~~~~ 313 (446)
++.++. ...|++|++.++.
T Consensus 222 l~~~~~~~~~~G~~~~v~gG~ 242 (244)
T 1edo_A 222 LALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHHCSGGGGCCSCEEEESTTT
T ss_pred HhCCCccCCcCCCEEEeCCCc
Confidence 995542 2358899988763
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.2e-25 Score=213.70 Aligned_cols=218 Identities=16% Similarity=0.104 Sum_probs=165.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++.. + .++.++.+|++|.+++
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~~~v 92 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQA---------G----LEGRGAVLNVNDATAV 92 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---------T----CCCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEEeCCCHHHH
Confidence 56789999999999999999999999999999999998888777766543 2 5688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-- 170 (270)
T 3ftp_A 93 DALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRPMMKARGGRIVNITSVVGSAG-- 170 (270)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC--
Confidence 87764 79999999996432 223455668899999999999885 345579999999765332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++...................+.+.+++|+|++++
T Consensus 171 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~ 246 (270)
T 3ftp_A 171 ----NPGQVNYAAAKAGVAGMTRALAREIGSRGITVNCVAPGFIDTDMTKGLPQEQQTALKTQIPLGRLGSPEDIAHAVA 246 (270)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHHSCHHHHHHHHTTCTTCSCBCHHHHHHHHH
T ss_pred ----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCcchhhcCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 1345679999999887765 26899999999999887321110000001112223456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++.+.. ...|++|+|.++..
T Consensus 247 ~L~s~~~~~itG~~i~vdGG~~ 268 (270)
T 3ftp_A 247 FLASPQAGYITGTTLHVNGGMF 268 (270)
T ss_dssp HHHSGGGTTCCSCEEEESTTSS
T ss_pred HHhCCCcCCccCcEEEECCCcc
Confidence 9997543 34689999988754
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=209.03 Aligned_cols=220 Identities=13% Similarity=0.071 Sum_probs=162.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... ....++.++.+|++|.+++
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~D~~~~~~v 79 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLET-----------APDAEVLTTVADVSDEAQV 79 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTCCEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh-----------cCCceEEEEEccCCCHHHH
Confidence 56789999999999999999999999999999999988777666555432 0015789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||.......
T Consensus 80 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 159 (267)
T 1iy8_A 80 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI 159 (267)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEEcchhhccCC
Confidence 87764 78999999996432 22334566889999988776665 44567899999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--c-ccce-e----ecccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--E-THNI-T----LSQEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~-~~~~-~----~~~~~~~~~~~v~ 284 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++..... . .... . ........+.+.+
T Consensus 160 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ 233 (267)
T 1iy8_A 160 ------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE 233 (267)
T ss_dssp ------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEeCCCcCcchhccccccChhhhhhHHHHHhccCCCCCCcC
Confidence 335679999999998765 3699999999999998742110 0 0000 0 0001122356789
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++|+|+++++++.++. ...|+++++.++..
T Consensus 234 ~~dvA~~v~~l~s~~~~~~tG~~i~vdGG~~ 264 (267)
T 1iy8_A 234 APEIAAVVAFLLSDDASYVNATVVPIDGGQS 264 (267)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHcCccccCCCCCEEEECCCcc
Confidence 9999999999997642 34688999887753
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.92 E-value=6.5e-25 Score=210.96 Aligned_cols=214 Identities=16% Similarity=0.104 Sum_probs=159.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+ ..++.++.+|++|.+++
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~d~~~v 73 (263)
T 3ak4_A 10 LSGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGL----------------ENGGFAVEVDVTKRASV 73 (263)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC----------------TTCCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------------hcCCeEEEEeCCCHHHH
Confidence 45689999999999999999999999999999999987665543211 02688999999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++.+ .+ .++||++||.......
T Consensus 74 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 153 (263)
T 3ak4_A 74 DAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHFLASNTKGVIVNTASLAAKVGA 153 (263)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEecccccccCC
Confidence 88775 89999999996432 2223455688999999999888854 34 6799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc-----c-----cce-eecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-----T-----HNI-TLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~-----~-----~~~-~~~~~~~~~~~ 281 (446)
.....|+.+|...|.+.+. .|+++++||||+++++...... . ... .........+.
T Consensus 154 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 227 (263)
T 3ak4_A 154 ------PLLAHYSASKFAVFGWTQALAREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRGMTPEAVRAEYVSLTPLGR 227 (263)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHTSCHHHHHHHHHHTCTTCS
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHhHcCeEEEEEecccccChhhhhhccccccccccCcHHHHHHHHhcCCCCC
Confidence 2356799999999887652 5999999999999987421110 0 000 00001122356
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++|+|+++++++.++. ...|++|++.++.
T Consensus 228 ~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdgG~ 260 (263)
T 3ak4_A 228 IEEPEDVADVVVFLASDAARFMTGQGINVTGGV 260 (263)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CcCHHHHHHHHHHHhCccccCCCCCEEEECcCE
Confidence 8999999999999997643 3468899998874
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=6.8e-25 Score=212.81 Aligned_cols=217 Identities=18% Similarity=0.188 Sum_probs=162.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 20 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~~~~~v 86 (277)
T 2rhc_B 20 QDSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---------G----VEADGRTCDVRSVPEI 86 (277)
T ss_dssp TTSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEECCCCCHHHH
Confidence 56689999999999999999999999999999999988777666655432 2 5689999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC------CCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~------~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++.+. +.++||++||......
T Consensus 87 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~m~~~~~g~iv~isS~~~~~~ 166 (277)
T 2rhc_B 87 EALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQG 166 (277)
T ss_dssp HHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTCHHHHTEEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhChhhHhhcCCeEEEEECccccccC
Confidence 87764 79999999996432 12234556889999999999997654 5679999999865332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc----c------cc-eeecccCcccC
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE----T------HN-ITLSQEDTLFG 280 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~----~------~~-~~~~~~~~~~~ 280 (446)
......|+.+|...+.+.+. .|+++++|+||+++++...... . .. ..........+
T Consensus 167 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 240 (277)
T 2rhc_B 167 ------VVHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIG 240 (277)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHSTTS
T ss_pred ------CCCCccHHHHHHHHHHHHHHHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHhcCCCC
Confidence 13346799999999987652 5899999999999987421100 0 00 00000112235
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++++|+|+++++++.++. ...|++|++.++.
T Consensus 241 r~~~~~dvA~~v~~l~s~~~~~~tG~~~~vdGG~ 274 (277)
T 2rhc_B 241 RYVQPSEVAEMVAYLIGPGAAAVTAQALNVCGGL 274 (277)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 68999999999999997653 3468899998764
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=215.59 Aligned_cols=235 Identities=15% Similarity=0.156 Sum_probs=170.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... + ....++.++.+|++|.+++
T Consensus 24 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~-~~~~~~~~~~~Dv~d~~~v 93 (297)
T 1xhl_A 24 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKA---------G-VPAEKINAVVADVTEASGQ 93 (297)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T-CCGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C-CCCceEEEEecCCCCHHHH
Confidence 45689999999999999999999999999999999988877766655432 1 0012789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc--------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~--------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||..... ..+++..+++|+.++.++++++.. .+ ++||++||......
T Consensus 94 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~-g~IV~isS~~~~~~ 172 (297)
T 1xhl_A 94 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTK-GEIVNVSSIVAGPQ 172 (297)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CEEEEECCGGGSSS
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcC-CEEEEEcCchhccC
Confidence 87764 799999999964321 223455688999999999988854 45 79999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--c------cce-eecccCcccCCc
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--T------HNI-TLSQEDTLFGGQ 282 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~------~~~-~~~~~~~~~~~~ 282 (446)
.. .....|+.+|...+.+.+ ..|+++++|+||+++++...... . ... .........+.+
T Consensus 173 ~~-----~~~~~Y~asKaa~~~l~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 247 (297)
T 1xhl_A 173 AH-----SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC 247 (297)
T ss_dssp CC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred CC-----CCcchHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcCccccccccccccccchHHHHHHHHhcCCCCCC
Confidence 20 234579999999988765 36999999999999987421110 0 000 000111223467
Q ss_pred cCHHHHHHHHHHHHhCC--CCCCCcEEEEecCCCCChhhHHHHHHhcc
Q 013273 283 VSNLQVAELLACMAKNR--SLSYCKVVEVIAETTAPLTPMEELLAKIP 328 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~--~~~~~~v~ni~~~~~~t~~~i~e~l~~i~ 328 (446)
++++|+|+++++++.++ ....|++|++.++......+....+.+++
T Consensus 248 ~~pedvA~~v~~l~s~~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~ 295 (297)
T 1xhl_A 248 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGSTLVMGMQTHDLMSVL 295 (297)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGGGCCGGGGSCHHHHT
T ss_pred cCHHHHHHHHHHHhCCcccCCccCcEEEECCCccccccccccchhhhh
Confidence 89999999999999754 23568999998887666666555555443
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=208.89 Aligned_cols=217 Identities=13% Similarity=0.055 Sum_probs=158.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++ ...+.+++... .+ .++.++.+|++|.++
T Consensus 2 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~----~~~~~~~~D~~~~~~ 69 (260)
T 1x1t_A 2 LKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--------HG----VKVLYDGADLSKGEA 69 (260)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--------HT----SCEEEECCCTTSHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhc--------cC----CcEEEEECCCCCHHH
Confidence 456899999999999999999999999999999999877 66655554321 01 468899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||..+....
T Consensus 70 v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 149 (260)
T 1x1t_A 70 VRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVAS 149 (260)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECcHHhCcCC
Confidence 887764 79999999996432 223345668899999999988884 3466799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----------ccee-ec-ccCcccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----------HNIT-LS-QEDTLFG 280 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----------~~~~-~~-~~~~~~~ 280 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++....... .... .. ......+
T Consensus 150 ------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 223 (260)
T 1x1t_A 150 ------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPSL 223 (260)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTTC
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHhccCCEEEEEEeecCccCchHHHhhhhhccccCCchHHHHHHHhhccCCCC
Confidence 335679999999998775 258999999999999884321100 0000 00 0111235
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.+++++|+|+++++++.+.. ...|++|++.++
T Consensus 224 ~~~~p~dva~~~~~l~s~~~~~~tG~~~~vdgG 256 (260)
T 1x1t_A 224 QFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCcCHHHHHHHHHHHhChhhcCCCCCEEEECCC
Confidence 67899999999999997642 346889988776
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=210.47 Aligned_cols=220 Identities=13% Similarity=0.132 Sum_probs=161.9
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... .+ .++.++.+|++|.+
T Consensus 17 ~~l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~~~~ 84 (267)
T 1vl8_A 17 FDLRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--------YG----VETMAFRCDVSNYE 84 (267)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HC----CCEEEEECCTTCHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--------cC----CeEEEEEcCCCCHH
Confidence 3466789999999999999999999999999999999988777666555211 01 46889999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||..+...
T Consensus 85 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~ 164 (267)
T 1vl8_A 85 EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEV 164 (267)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCcchhcc
Confidence 8887764 79999999996432 122345567899999999988874 456789999999872111
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
+ ......|+.+|..++.+++ ..|+++++|+||++.++...... .... .........+.+++++|+|
T Consensus 165 ~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA 239 (267)
T 1vl8_A 165 T-----MPNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLK 239 (267)
T ss_dssp C-----SSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGH
T ss_pred C-----CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCccccccccccChHHHHHHHhhCCCCCCcCHHHHH
Confidence 1 1335679999999998775 26999999999999987422110 0000 0000112235678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++++.+.. ...|+++++.++
T Consensus 240 ~~v~~l~s~~~~~itG~~i~vdGG 263 (267)
T 1vl8_A 240 GVAVFLASEEAKYVTGQIIFVDGG 263 (267)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHcCccccCCcCCeEEECCC
Confidence 99999997643 346888988776
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=208.88 Aligned_cols=218 Identities=13% Similarity=0.130 Sum_probs=153.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..++++|||||+|+||+++++.|+++|++|++++| +.+..+.+.+++... + .++.++.+|++|.++
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~~~ 93 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGL---------G----ARVIFLRADLADLSS 93 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSGGG
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhc---------C----CcEEEEEecCCCHHH
Confidence 45689999999999999999999999999999996 666666665555432 2 579999999999999
Q ss_pred HHHHhc-------CCCEEEEcccCC--CC------ccCCCCCcccchHHHHHHHHHHHHhC----C---CCEEEEEcccc
Q 013273 157 IEPALG-------NASVVICCIGAS--EK------EVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~--~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~---v~r~V~vSS~~ 214 (446)
++++++ ++|+||||||.. .. +..+++..+++|+.++.++++++... + .++||++||..
T Consensus 94 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~g~Iv~isS~~ 173 (280)
T 4da9_A 94 HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVLKAMLASDARASRSIINITSVS 173 (280)
T ss_dssp HHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHhCCCCCCEEEEEcchh
Confidence 888774 899999999973 11 23345667899999999999888543 2 46999999977
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCcccCCccCHH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~~~ 286 (446)
.... ......|+.+|...+.+.+ ..|+++++|+||++.++........ ...........+.+.+++
T Consensus 174 ~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pe 247 (280)
T 4da9_A 174 AVMT------SPERLDYCMSKAGLAAFSQGLALRLAETGIAVFEVRPGIIRSDMTAAVSGKYDGLIESGLVPMRRWGEPE 247 (280)
T ss_dssp ------------CCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC----------------------CCBCHH
T ss_pred hccC------CCCccHHHHHHHHHHHHHHHHHHHHHHhCcEEEEEeecCCcCCchhhcchhHHHHHhhcCCCcCCcCCHH
Confidence 6432 1334579999999998765 2789999999999998743211110 001111123345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+|+++++++.+.. ...|++++|.++..
T Consensus 248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (280)
T 4da9_A 248 DIGNIVAGLAGGQFGFATGSVIQADGGLS 276 (280)
T ss_dssp HHHHHHHHHHTSTTGGGTTCEEEESTTCC
T ss_pred HHHHHHHHHhCccccCCCCCEEEECCCcc
Confidence 99999999998764 24689999987753
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=209.66 Aligned_cols=217 Identities=18% Similarity=0.140 Sum_probs=159.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 85 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---------G----LNVEGSVCDLLSRTER 85 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEECCCCCHHHH
Confidence 56789999999999999999999999999999999988777666555432 1 5789999999999988
Q ss_pred HHHh--------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~--------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||..+....
T Consensus 86 ~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~ 165 (273)
T 1ae1_A 86 DKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSAL 165 (273)
T ss_dssp HHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcCHhhcCCC
Confidence 8776 679999999996432 222345567899999999999884 4466799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----ccee-ecccCcccCCccCHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNIT-LSQEDTLFGGQVSNL 286 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~~~~-~~~~~~~~~~~v~~~ 286 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++....... .... ........+.+.+++
T Consensus 166 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 239 (273)
T 1ae1_A 166 ------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKPQ 239 (273)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCHH
T ss_pred ------CCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCchhhhhhhcccCcHHHHHHHHhcCCCCCCcCHH
Confidence 345679999999998765 259999999999999884221100 0000 000012234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++++.+.. ...|+++++.++.
T Consensus 240 dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 267 (273)
T 1ae1_A 240 EVSALIAFLCFPAASYITGQIIWADGGF 267 (273)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCccccCcCCCEEEECCCc
Confidence 99999999997543 3468899988774
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=208.20 Aligned_cols=217 Identities=14% Similarity=0.102 Sum_probs=160.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||++++++|+++|++|++++| +.++...+.+.++.. + .++.++.+|++|.++
T Consensus 5 l~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~~ 71 (261)
T 1gee_A 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---------G----GEAIAVKGDVTVESD 71 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CEEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhc---------C----CceEEEECCCCCHHH
Confidence 45689999999999999999999999999999999 776666665555432 1 568899999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... ...++...+++|+.++.++++++.. .+ .++||++||......
T Consensus 72 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~isS~~~~~~ 151 (261)
T 1gee_A 72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP 151 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEeCCHHhcCC
Confidence 887774 89999999996432 2223445688999999998888753 34 679999999866432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
..+...|+.+|...|.+.+ ..|+++++||||+++++...... .... .........+.+++++|+|
T Consensus 152 ------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 225 (261)
T 1gee_A 152 ------WPLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA 225 (261)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred ------CCCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCcCCchhhhcccChhHHHHHHhcCCCCCCcCHHHHH
Confidence 2345679999999887765 25999999999999998432110 0000 0000112234678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.+.. ...|++|++.++.
T Consensus 226 ~~~~~l~~~~~~~~~G~~~~v~gg~ 250 (261)
T 1gee_A 226 AVAAWLASSEASYVTGITLFADGGM 250 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCccccCCCCcEEEEcCCc
Confidence 99999997542 2468899998774
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=206.06 Aligned_cols=219 Identities=16% Similarity=0.131 Sum_probs=162.7
Q ss_pred CCCCCEEEEECCCc-HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATG-KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG-~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.+++||||||+| +||++++++|+++|++|++++|+.++...+.++++.. ...++.++.+|++|.+
T Consensus 19 ~l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~~ 86 (266)
T 3o38_A 19 LLKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADL------------GLGRVEAVVCDVTSTE 86 (266)
T ss_dssp TTTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------CSSCEEEEECCTTCHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhc------------CCCceEEEEeCCCCHH
Confidence 46778999999997 7999999999999999999999998887777666432 1258999999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNK 217 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~ 217 (446)
++++++ +++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||.....
T Consensus 87 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~ 166 (266)
T 3o38_A 87 AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRYFRGVDHGGVIVNNASVLGWR 166 (266)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSCCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEeCCHHHcC
Confidence 888776 478999999996432 22334556889999999999988643 556899999977643
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccCHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
.. .....|+.+|...+.+.+ ..|+++++|+||++.++..... ..............+.+++++|+|
T Consensus 167 ~~------~~~~~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~~~dva 240 (266)
T 3o38_A 167 AQ------HSQSHYAAAKAGVMALTRCSAIEAVEFGVRINAVSPSIARHKFLEKTSSSELLDRLASDEAFGRAAEPWEVA 240 (266)
T ss_dssp CC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC-----------------CCTTSSCCCHHHHH
T ss_pred CC------CCCchHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCcccchhhhccCcHHHHHHHHhcCCcCCCCCHHHHH
Confidence 22 345679999999998765 2699999999999998742211 111111111223345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.+.. ...|+++++.++.
T Consensus 241 ~~i~~l~s~~~~~~tG~~i~vdgG~ 265 (266)
T 3o38_A 241 ATIAFLASDYSSYMTGEVVSVSSQR 265 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESSCC
T ss_pred HHHHHHcCccccCccCCEEEEcCCc
Confidence 99999998643 3568999998763
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=210.19 Aligned_cols=218 Identities=14% Similarity=0.085 Sum_probs=159.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++++|||||+|+||+++++.|+++|++|++++| +.+..+.+.+++... ...++.++.+|++|.++
T Consensus 23 l~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~d~~~ 90 (281)
T 3v2h_A 23 MMTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGL------------SSGTVLHHPADMTKPSE 90 (281)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTT------------CSSCEEEECCCTTCHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhc------------cCCcEEEEeCCCCCHHH
Confidence 55689999999999999999999999999999999 555555555544321 12679999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||.......
T Consensus 91 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 170 (281)
T 3v2h_A 91 IADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPPMKKKGWGRIINIASAHGLVAS 170 (281)
T ss_dssp HHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCcccccCC
Confidence 88776 379999999996432 22345566889999999999987 44566799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc------------eeecccCcccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN------------ITLSQEDTLFG 280 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~------------~~~~~~~~~~~ 280 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++......... ..........+
T Consensus 171 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 244 (281)
T 3v2h_A 171 ------PFKSAYVAAKHGIMGLTKTVALEVAESGVTVNSICPGYVLTPLVEKQIPDQARTRGITEEQVINEVMLKGQPTK 244 (281)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC----------------------------CCTTC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEECCCCcCcchhhhcchhhhhcCCCHHHHHHHHHHhcCCCC
Confidence 334679999999998865 26899999999999987422110000 00011223345
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++++|+|+++++++.+.. ...|+++++.++.
T Consensus 245 r~~~~edvA~~v~~L~s~~a~~itG~~i~vdGG~ 278 (281)
T 3v2h_A 245 KFITVEQVASLALYLAGDDAAQITGTHVSMDGGW 278 (281)
T ss_dssp SCBCHHHHHHHHHHHHSSGGGGCCSCEEEESTTG
T ss_pred CccCHHHHHHHHHHHcCCCcCCCCCcEEEECCCc
Confidence 68999999999999998754 2468999997763
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-25 Score=210.37 Aligned_cols=216 Identities=10% Similarity=0.037 Sum_probs=140.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||++++++|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.++
T Consensus 6 ~~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 72 (253)
T 3qiv_A 6 RFENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVAD---------G----GTAISVAVDVSDPES 72 (253)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CEEEEEECCTTSHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence 356789999999999999999999999999999999998888877766542 2 678999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCC---------CccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEcccccc
Q 013273 157 IEPALG-------NASVVICCIGASE---------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN 216 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~---------~~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~ 216 (446)
++++++ ++|+||||||... .+..++...+++|+.++.++++++ ++.+.++||++||....
T Consensus 73 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 152 (253)
T 3qiv_A 73 AKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAVYKKMTKRGGGAIVNQSSTAAW 152 (253)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECC----
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCEEEEECCcccc
Confidence 888764 8999999999631 122334566889999977777666 34566799999998763
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~Dv 288 (446)
. ....|+.+|...+.+.+ ..|+++++|+||+++++.......... .........+.+.+++|+
T Consensus 153 ~---------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv 223 (253)
T 3qiv_A 153 L---------YSNYYGLAKVGINGLTQQLSRELGGRNIRINAIAPGPIDTEANRTTTPKEMVDDIVKGLPLSRMGTPDDL 223 (253)
T ss_dssp ----------------CCHHHHHHHHHHHHHHTTTTTEEEEEEEC-------------------------------CCHH
T ss_pred C---------CCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecCCcccchhhcCcHHHHHHHhccCCCCCCCCHHHH
Confidence 2 23469999999998765 258999999999999885322111111 001112223456788999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+++++++.+.. ...|++|++.++..
T Consensus 224 a~~~~~l~s~~~~~~tG~~~~vdgG~~ 250 (253)
T 3qiv_A 224 VGMCLFLLSDEASWITGQIFNVDGGQI 250 (253)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEC-----
T ss_pred HHHHHHHcCccccCCCCCEEEECCCee
Confidence 999999997643 24689999988754
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.8e-24 Score=209.19 Aligned_cols=216 Identities=17% Similarity=0.119 Sum_probs=159.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-- 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-- 154 (446)
+.+++||||||+|+||+++++.|+++|++|++++| +.++...+.++++.. .+ .++.++.+|++|.
T Consensus 9 ~~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--------~~----~~~~~~~~Dl~~~~~ 76 (276)
T 1mxh_A 9 SECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA--------RA----GSAVLCKGDLSLSSS 76 (276)
T ss_dssp --CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--------ST----TCEEEEECCCSSSTT
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHh--------cC----CceEEEeccCCCccc
Confidence 45689999999999999999999999999999999 887777666655432 01 5789999999999
Q ss_pred --hcHHHHhc-------CCCEEEEcccCCCCc------c-----------CCCCCcccchHHHHHHHHHHHHhC---CC-
Q 013273 155 --VQIEPALG-------NASVVICCIGASEKE------V-----------FDITGPYRIDFQATKNLVDAATIA---KV- 204 (446)
Q Consensus 155 --~~~~~a~~-------~~D~VI~~Ag~~~~~------~-----------~~~~~~~~vNv~g~~~l~~aa~~~---~v- 204 (446)
++++++++ ++|+||||||..... . .+++..+++|+.++.++++++... +.
T Consensus 77 ~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 156 (276)
T 1mxh_A 77 LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGA 156 (276)
T ss_dssp HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-----
T ss_pred cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHHHHHHHHHHHHHHhcCCC
Confidence 88877763 799999999964321 1 233456889999999999999874 33
Q ss_pred -----CEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceee
Q 013273 205 -----NHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL 272 (446)
Q Consensus 205 -----~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~ 272 (446)
++||++||....... .....|+.+|...+.+.+ ..|+++++|+||+++++ ..........+
T Consensus 157 ~~~~~g~iv~isS~~~~~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~~~~~~~~~~~ 229 (276)
T 1mxh_A 157 WRSRNLSVVNLCDAMTDLPL------PGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-PAMPQETQEEY 229 (276)
T ss_dssp --CCCEEEEEECCGGGGSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-SSSCHHHHHHH
T ss_pred CCCCCcEEEEECchhhcCCC------CCCeehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-ccCCHHHHHHH
Confidence 799999998764321 345679999999998765 25999999999999998 22110000000
Q ss_pred cccCcccCC-ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 273 SQEDTLFGG-QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 273 ~~~~~~~~~-~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
. .....+. +++++|+|+++++++.+.. ...|++|++.++.
T Consensus 230 ~-~~~p~~r~~~~~~dva~~v~~l~s~~~~~~tG~~~~vdgG~ 271 (276)
T 1mxh_A 230 R-RKVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 271 (276)
T ss_dssp H-TTCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred H-hcCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCch
Confidence 0 1122334 7899999999999997643 2458899987763
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.92 E-value=5.8e-25 Score=212.25 Aligned_cols=215 Identities=12% Similarity=0.068 Sum_probs=158.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+ + .++.++.+|++|.++
T Consensus 24 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~d~~~ 87 (266)
T 3grp_A 24 KLTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADL------------G----KDVFVFSANLSDRKS 87 (266)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----SSEEEEECCTTSHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CceEEEEeecCCHHH
Confidence 356789999999999999999999999999999999988776654322 1 579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 88 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~Iv~isS~~~~~~- 166 (266)
T 3grp_A 88 IKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHSMMRRRYGRIINITSIVGVVG- 166 (266)
T ss_dssp HHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCC------
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEEEEECCHHHcCC-
Confidence 88776 379999999996432 233456668899999888777664 456679999999766332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+.+++|+|+++
T Consensus 167 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~edvA~~v 241 (266)
T 3grp_A 167 -----NPGQTNYCAAKAGLIGFSKALAQEIASRNITVNCIAPGFIKSAMTDKLNEKQKEAIMAMIPMKRMGIGEEIAFAT 241 (266)
T ss_dssp -------CHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSHHHHTCCHHHHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCcCCCchhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 1345679999999887765 2689999999999998732111000000011123345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.+.. ...|+++++.++.
T Consensus 242 ~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 3grp_A 242 VYLASDEAAYLTGQTLHINGGM 263 (266)
T ss_dssp HHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHhCccccCccCCEEEECCCe
Confidence 99997653 3468999998764
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=3.1e-24 Score=209.02 Aligned_cols=218 Identities=17% Similarity=0.171 Sum_probs=162.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... ..++.++.+|++|.+++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~-------------~~~~~~~~~Dv~d~~~v 92 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGA-------------GGQAIALEADVSDELQM 92 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTT-------------TCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc-------------CCcEEEEEccCCCHHHH
Confidence 45689999999999999999999999999999999998877776655321 15799999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||.......
T Consensus 93 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 172 (283)
T 3v8b_A 93 RNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVPYLKQRGGGAIVVVSSINGTRTF 172 (283)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCceEEEEcChhhccCC
Confidence 8776 479999999996421 22334556899999999999988 45567799999997653311
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccc------eeecccCccc--CCcc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN------ITLSQEDTLF--GGQV 283 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~------~~~~~~~~~~--~~~v 283 (446)
. ......|+.+|...+.+.+ ..|+++++|+||++.++...... ... .......... +.+.
T Consensus 173 ~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~r~~ 248 (283)
T 3v8b_A 173 T----TPGATAYTATKAAQVAIVQQLALELGKHHIRVNAVCPGAIETNISDNTKLRHEEETAIPVEWPKGQVPITDGQPG 248 (283)
T ss_dssp C----STTCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECSBSSCTTCCTTBCCHHHHSCCCBCTTCSCGGGTTCCB
T ss_pred C----CCCchHHHHHHHHHHHHHHHHHHHhCccCcEEEEEEeCCCcCCcccccccccchhhhhhhhhhhhcCccccCCCC
Confidence 0 1345679999999998876 26899999999999987432110 000 1111111112 5678
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++|||+++++++.+.. ...|++++|.++
T Consensus 249 ~pedvA~~v~fL~s~~a~~itG~~i~vdGG 278 (283)
T 3v8b_A 249 RSEDVAELIRFLVSERARHVTGSPVWIDGG 278 (283)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CHHHHHHHHHHHcCccccCCcCCEEEECcC
Confidence 99999999999997643 346889988776
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.2e-25 Score=205.77 Aligned_cols=184 Identities=15% Similarity=0.100 Sum_probs=145.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+||||||+||||++++++|+++ +|++++|+.++...+.+.+ .. +++.+|++|.++++++
T Consensus 1 k~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~-----------------~~-~~~~~D~~~~~~~~~~ 60 (207)
T 2yut_A 1 MRVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREV-----------------GA-RALPADLADELEAKAL 60 (207)
T ss_dssp CEEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHH-----------------TC-EECCCCTTSHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhc-----------------cC-cEEEeeCCCHHHHHHH
Confidence 57999999999999999999998 9999999987766544322 12 7889999999999998
Q ss_pred hc---CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHH
Q 013273 161 LG---NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGV 231 (446)
Q Consensus 161 ~~---~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y 231 (446)
++ ++|+||||||.... +..++...+++|+.++.++++++++.+.++||++||..+... ..+...|
T Consensus 61 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~sS~~~~~~------~~~~~~Y 134 (207)
T 2yut_A 61 LEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARFQKGARAVFFGAYPRYVQ------VPGFAAY 134 (207)
T ss_dssp HHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCHHHHS------STTBHHH
T ss_pred HHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHhcCCcEEEEEcChhhccC------CCCcchH
Confidence 87 89999999996432 223345568899999999999997777789999999876432 2345689
Q ss_pred HHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 232 LLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 232 ~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
+.+|...|.+++. .|+++++||||+++++... ......+.+++++|+|+++++++.++.
T Consensus 135 ~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~t~~~~----------~~~~~~~~~~~~~dva~~~~~~~~~~~ 200 (207)
T 2yut_A 135 AAAKGALEAYLEAARKELLREGVHLVLVRLPAVATGLWA----------PLGGPPKGALSPEEAARKVLEGLFREP 200 (207)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTCEEEEECCCCBCSGGGG----------GGTSCCTTCBCHHHHHHHHHHHHC--C
T ss_pred HHHHHHHHHHHHHHHHHHhhhCCEEEEEecCcccCCCcc----------ccCCCCCCCCCHHHHHHHHHHHHhCCC
Confidence 9999999988762 6999999999999987411 111223578999999999999998765
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.92 E-value=9.7e-25 Score=212.29 Aligned_cols=222 Identities=13% Similarity=0.082 Sum_probs=167.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... ..++.++.+|++|.+++
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~~~~~v 72 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGG-------------GGEAAALAGDVGDEALH 72 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTT-------------TCCEEECCCCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc-------------CCcEEEEECCCCCHHHH
Confidence 56789999999999999999999999999999999998877766655321 26799999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||... .+..+++..+++|+.|+.++++++. +.+.++||++||..+...+
T Consensus 73 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~ 152 (280)
T 3tox_A 73 EALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVPAIAALGGGSLTFTSSFVGHTAG 152 (280)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCSBTTTBC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcChhhCcCC
Confidence 8776 47999999999642 1223455678999999999998874 3456799999998764222
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc---ccc-eeecccCcccCCccCHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---THN-ITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~---~~~-~~~~~~~~~~~~~v~~~Dv 288 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...... ... ..........+.+.+++|+
T Consensus 153 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedv 227 (280)
T 3tox_A 153 -----FAGVAPYAASKAGLIGLVQALAVELGARGIRVNALLPGGTDTPANFANLPGAAPETRGFVEGLHALKRIARPEEI 227 (280)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBSSTTSGGGSTTCCTHHHHHHHTTSTTSSCBCHHHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCCCCchhhhhccccCHHHHHHHhccCccCCCcCHHHH
Confidence 1345679999999998765 26999999999999988532110 000 0001112234567899999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCCCCCh
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAETTAPL 317 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~~~t~ 317 (446)
|+++++++.+.. ...|++++|.++...+.
T Consensus 228 A~~v~~L~s~~a~~itG~~i~vdGG~~~~~ 257 (280)
T 3tox_A 228 AEAALYLASDGASFVTGAALLADGGASVTK 257 (280)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTGGGCC
T ss_pred HHHHHHHhCccccCCcCcEEEECCCccccc
Confidence 999999998653 35689999988865544
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-24 Score=206.93 Aligned_cols=218 Identities=17% Similarity=0.098 Sum_probs=160.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-------------CchhHHHHHHHHHHhhhcccccccCCCCCCc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVEM 143 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-------------~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~ 143 (446)
.++++++|||||+|+||+++++.|+++|++|++++| +.++.+.+.+.++.. + .+
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~ 78 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQ---------G----RK 78 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTT---------T----CC
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---------C----Ce
Confidence 356789999999999999999999999999999998 455555555444321 2 67
Q ss_pred eEEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CC
Q 013273 144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VN 205 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~ 205 (446)
+.++.+|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+ .+
T Consensus 79 ~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g 158 (280)
T 3pgx_A 79 ALTRVLDVRDDAALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPAMIEAGNGG 158 (280)
T ss_dssp EEEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCE
T ss_pred EEEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999888876 479999999996532 2234456688999999999998843 33 56
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-------cccce-
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-------ETHNI- 270 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-------~~~~~- 270 (446)
+||++||....... .....|+.+|...+.+.+ .+|+++++|+||+++++..... .....
T Consensus 159 ~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~ 232 (280)
T 3pgx_A 159 SIVVVSSSAGLKAT------PGNGHYSASKHGLTALTNTLAIELGEYGIRVNSIHPYSVETPMIEPEAMMEIFARHPSFV 232 (280)
T ss_dssp EEEEECCGGGTSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCHHHHHHHHHHCGGGG
T ss_pred EEEEEcchhhccCC------CCchhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccCcccchhhhhhhhhcCchhh
Confidence 99999998764322 335679999999998765 2799999999999999853210 00000
Q ss_pred -eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 271 -TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 271 -~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+.........+++++|+|+++++++.+.. ...|+++++.++.
T Consensus 233 ~~~~~~~~~~~r~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 277 (280)
T 3pgx_A 233 HSFPPMPVQPNGFMTADEVADVVAWLAGDGSGTLTGTQIPVDKGA 277 (280)
T ss_dssp GGSCCBTTBCSSCBCHHHHHHHHHHHHSGGGTTCSSCEEEESTTG
T ss_pred hhhhhcccCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 000111112257899999999999997643 2468899987763
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-25 Score=207.80 Aligned_cols=216 Identities=13% Similarity=0.064 Sum_probs=158.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+.. ..++.++.+|++|.+++
T Consensus 4 ~~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~D~~~~~~~ 69 (251)
T 1zk4_A 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW 69 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhc--------------cCceEEEECCCCCHHHH
Confidence 4578999999999999999999999999999999998776655443311 15799999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCC-CEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v-~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++. +.+. ++||++||..+....
T Consensus 70 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~ 149 (251)
T 1zk4_A 70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD 149 (251)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCCchhccCC
Confidence 87764 59999999996432 122334568899998887776653 4565 799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccce-eecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...|.+++ ..|+++++||||+++++.......... .........+.+++++|+|
T Consensus 150 ------~~~~~Y~~sK~a~~~~~~~~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva 223 (251)
T 1zk4_A 150 ------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA 223 (251)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred ------CCCccchHHHHHHHHHHHHHHHHhcccCCCeEEEEEeeCcCcchhhhhcCchhhhHHHhhcCCCCCCcCHHHHH
Confidence 345679999999987764 468999999999999874321110000 0001112235678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.++. ...|++|++.++.
T Consensus 224 ~~~~~l~~~~~~~~~G~~~~v~gG~ 248 (251)
T 1zk4_A 224 YICVYLASNESKFATGSEFVVDGGY 248 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHcCcccccccCcEEEECCCc
Confidence 99999997643 2458899998774
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1e-24 Score=209.42 Aligned_cols=219 Identities=16% Similarity=0.174 Sum_probs=157.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH-HHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN-LVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~-l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++||||||+|+||++++++|+++|++|++++|+...... +.+.++. ...++.++.+|++|.+++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~Dl~~~~~v 72 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKD-------------VEERLQFVQADVTKKEDL 72 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGG-------------GGGGEEEEECCTTSHHHH
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHh-------------cCCceEEEEecCCCHHHH
Confidence 45799999999999999999999999999999887654333 2222111 115799999999999998
Q ss_pred HHHhc-------CCCEEEEcccC--CC------CccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEcccccc-C
Q 013273 158 EPALG-------NASVVICCIGA--SE------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN-K 217 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~--~~------~~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~-~ 217 (446)
+++++ ++|+||||||. .. .+..++...+++|+.++.++++++ ++.+.++||++||.+.. .
T Consensus 73 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~iss~~~~~~ 152 (264)
T 3i4f_A 73 HKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVVPVMRKQNFGRIINYGFQGADSA 152 (264)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTTGGGC
T ss_pred HHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCeEEEEeechhccc
Confidence 88774 89999999993 21 122334566889999999999998 55677899999998543 2
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.+ ......|+.+|...+.+.+ ..|+++++|+||+++++...................+.+.+++|+|+
T Consensus 153 ~~-----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~ 227 (264)
T 3i4f_A 153 PG-----WIYRSAFAAAKVGLVSLTKTVAYEEAEYGITANMVCPGDIIGEMKEATIQEARQLKEHNTPIGRSGTGEDIAR 227 (264)
T ss_dssp CC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCGGGGSCCHHHHHHC--------CCCCHHHHHH
T ss_pred CC-----CCCCchhHHHHHHHHHHHHHHHHHhhhcCcEEEEEccCCccCccchhccHHHHHHHhhcCCCCCCcCHHHHHH
Confidence 22 1345679999999987765 26899999999999987432111111111112233456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
++++++.+.. ...|++|++.++...
T Consensus 228 ~v~~l~s~~~~~itG~~i~vdGG~~~ 253 (264)
T 3i4f_A 228 TISFLCEDDSDMITGTIIEVTGAVDV 253 (264)
T ss_dssp HHHHHHSGGGTTCCSCEEEESCSCCC
T ss_pred HHHHHcCcccCCCCCcEEEEcCceee
Confidence 9999998653 346899999887654
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=210.36 Aligned_cols=219 Identities=16% Similarity=0.062 Sum_probs=161.0
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+.+++||||||+|+||++++++|+++|++|++++|+.++...+.+.+ ..++.++.+|++|.+
T Consensus 12 ~~l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dl~d~~ 75 (291)
T 3rd5_A 12 PSFAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM----------------AGQVEVRELDLQDLS 75 (291)
T ss_dssp CCCTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS----------------SSEEEEEECCTTCHH
T ss_pred cCCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh----------------cCCeeEEEcCCCCHH
Confidence 3467789999999999999999999999999999999988776543311 257999999999999
Q ss_pred cHHHHhc---CCCEEEEcccCCC----CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC-------c
Q 013273 156 QIEPALG---NASVVICCIGASE----KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-------P 221 (446)
Q Consensus 156 ~~~~a~~---~~D~VI~~Ag~~~----~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~-------~ 221 (446)
+++++++ ++|+||||||... .+..+++..+++|+.++.++++++.....+|||++||........ .
T Consensus 76 ~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~riv~isS~~~~~~~~~~~~~~~~ 155 (291)
T 3rd5_A 76 SVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLPRLTDRVVTVSSMAHWPGRINLEDLNWR 155 (291)
T ss_dssp HHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGGGEEEEEEEECCGGGTTCCCCSSCTTCS
T ss_pred HHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeEeechhhccCCCCccccccc
Confidence 9999886 6799999999643 234556777899999999999999988777999999976633211 0
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCC--CCEEEEecCCccCCCcccccccceeecccCcccCC-ccCHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASG--LPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG-QVSNLQVAEL 291 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~g--l~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~-~v~~~DvA~a 291 (446)
.....+...|+.+|+..+.+.+ ..| +++++|+||++.++............ ......+. ..+++|+|++
T Consensus 156 ~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~g~~i~v~~v~PG~v~T~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~A~~ 234 (291)
T 3rd5_A 156 SRRYSPWLAYSQSKLANLLFTSELQRRLTAAGSPLRALAAHPGYSHTNLQGASGRKLGDA-LMSAATRVVATDADFGARQ 234 (291)
T ss_dssp SSCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEECCSGGGSCC---------------------CHHHHHHHHH
T ss_pred ccCCCCcchHHHHHHHHHHHHHHHHHHHhhCCCCEEEEEeeCCCCccccccccchHHHHH-HHHHHHHHHhCCHHHHHHH
Confidence 1223566789999999987765 246 99999999999887432111000000 00111111 2358999999
Q ss_pred HHHHHhCCCCCCCcEEEEecC
Q 013273 292 LACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~ 312 (446)
+++++.++ ...|++|++.++
T Consensus 235 ~~~l~~~~-~~~G~~~~vdgG 254 (291)
T 3rd5_A 235 TLYAASQD-LPGDSFVGPRFG 254 (291)
T ss_dssp HHHHHHSC-CCTTCEEEETTS
T ss_pred HHHHHcCC-CCCCceeCCccc
Confidence 99999986 467888887654
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=3.7e-24 Score=207.89 Aligned_cols=224 Identities=15% Similarity=0.115 Sum_probs=162.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC------------chhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~------------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
++.+++||||||+|+||+++++.|+++|++|++++|+ ......+...++.. + .++
T Consensus 7 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 73 (287)
T 3pxx_A 7 RVQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKT---------G----RKA 73 (287)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHT---------T----SCE
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhc---------C----Cce
Confidence 4567899999999999999999999999999999997 44444443333321 2 679
Q ss_pred EEEEcCCCChhcHHHHhc-------CCCEEEEcccCCCC----ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEc
Q 013273 145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVS 211 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vS 211 (446)
.++.+|++|.++++++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++|
T Consensus 74 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 153 (287)
T 3pxx_A 74 YTAEVDVRDRAAVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTG 153 (287)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEEC
T ss_pred EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEec
Confidence 999999999998887764 89999999996532 23345566899999999999999765 345999999
Q ss_pred cccccCC-----CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----cc----ce
Q 013273 212 SLGTNKF-----GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----TH----NI 270 (446)
Q Consensus 212 S~~~~~~-----~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~----~~ 270 (446)
|...... ............|+.+|...+.+.+ ..|+++++|+||+++++...... .. ..
T Consensus 154 S~~~~~~~~~~~~~~~~~~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 233 (287)
T 3pxx_A 154 SVAGLIAAAQPPGAGGPQGPGGAGYSYAKQLVDSYTLQLAAQLAPQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPS 233 (287)
T ss_dssp CHHHHHHHHCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred cchhcccccccccccccCCCccchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCccccccccccchhhhhccccccch
Confidence 9754211 1111222456679999999998765 25999999999999988532100 00 00
Q ss_pred ------eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 271 ------TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 271 ------~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.........+.+++++|||+++++++.+.. ...|++++|.++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~p~dva~~v~fL~s~~a~~itG~~i~vdGG~ 283 (287)
T 3pxx_A 234 RADALLAFPAMQAMPTPYVEASDISNAVCFLASDESRYVTGLQFKVDAGA 283 (287)
T ss_dssp HHHHHHHGGGGCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hHHHHhhhhhhcccCCCCCCHHHHHhhHheecchhhcCCCCceEeECchh
Confidence 000111222568999999999999997643 3568999998874
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=206.70 Aligned_cols=215 Identities=18% Similarity=0.099 Sum_probs=160.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~v~~ 68 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---------G----GHAVAVKVDVSDRDQVFA 68 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEecCCCHHHHHH
Confidence 468999999999999999999999999999999988777766655432 1 568999999999998888
Q ss_pred Hhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCc
Q 013273 160 ALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~ 221 (446)
+++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++||++||.......
T Consensus 69 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 146 (256)
T 1geg_A 69 AVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-- 146 (256)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC--
Confidence 774 89999999996432 2223455688999999998887754 34 5799999997653321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----c-----ccce-eecccCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----E-----THNI-TLSQEDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~-----~~~~-~~~~~~~~~~~~v 283 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++..... . .... .........+.++
T Consensus 147 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~ 222 (256)
T 1geg_A 147 ----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 222 (256)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred ----CCchhHHHHHHHHHHHHHHHHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHhcCCCCCCc
Confidence 234579999999988765 2699999999999998732110 0 0000 0000112234678
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+|+++++++.++. ...|+++++.++.
T Consensus 223 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 253 (256)
T 1geg_A 223 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM 253 (256)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 99999999999997643 3468899887764
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=6.7e-25 Score=210.22 Aligned_cols=224 Identities=13% Similarity=0.073 Sum_probs=160.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+..+.....+++... .+ .++.++.+|++|.+++
T Consensus 12 ~~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~~~~~~ 79 (265)
T 1h5q_A 12 FVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--------FG----VKTKAYQCDVSNTDIV 79 (265)
T ss_dssp CTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--------HT----CCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHh--------cC----CeeEEEEeeCCCHHHH
Confidence 45679999999999999999999999999999999776655444443321 01 5789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++... + .++||++||..+....
T Consensus 80 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 159 (265)
T 1h5q_A 80 TKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQIIN 159 (265)
T ss_dssp HHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHHHHhcCCCceEEEeCCchhhccc
Confidence 8776 358999999996432 22234455789999999999988543 3 4799999997663322
Q ss_pred Cc-hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 220 FP-AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~-~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.. .....+...|+.+|+..|.+++. .|+++++||||+++++...................+.+++++|+|++
T Consensus 160 ~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 239 (265)
T 1h5q_A 160 QSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTGQ 239 (265)
T ss_dssp EEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred cccccccccccccHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCccccccccccchhHHHHHHhcCcccCCCCHHHHHHH
Confidence 11 11223467899999999988752 58999999999999884321100000000111223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.++. ...|++|++.++.
T Consensus 240 ~~~l~~~~~~~~~G~~~~v~gG~ 262 (265)
T 1h5q_A 240 AILLLSDHATYMTGGEYFIDGGQ 262 (265)
T ss_dssp HHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHhhccCchhcCcCcEEEecCCE
Confidence 999997643 3468899998774
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.6e-24 Score=206.44 Aligned_cols=215 Identities=13% Similarity=0.078 Sum_probs=157.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCce-EEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML-ELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v-~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+++. .++ .++.+|++|.++
T Consensus 9 ~~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~ 72 (254)
T 2wsb_A 9 LDGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELG----------------AAVAARIVADVTDAEA 72 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEEECCTTCHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhc----------------ccceeEEEEecCCHHH
Confidence 456899999999999999999999999999999999877665544331 346 889999999998
Q ss_pred HHHHh------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|+||||||..... ..++...+++|+.++.++++++ ++.+.++||++||..+.....
T Consensus 73 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~~ 152 (254)
T 2wsb_A 73 MTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRAMVARGAGAIVNLGSMSGTIVNR 152 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCS
T ss_pred HHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEecchhccCCC
Confidence 88776 5799999999964321 1223455779999988877766 345778999999987643221
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~DvA~a 291 (446)
..+...|+.+|+..|.+++. .|+++++||||+++++....... ... .........+.+++++|+|++
T Consensus 153 ----~~~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 228 (254)
T 2wsb_A 153 ----PQFASSYMASKGAVHQLTRALAAEWAGRGVRVNALAPGYVATEMTLKMRERPELFETWLDMTPMGRCGEPSEIAAA 228 (254)
T ss_dssp ----SSCBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHHHHTCHHHHHHHHHTSTTSSCBCHHHHHHH
T ss_pred ----CCcchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEecccCchhhhccccChHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 12336799999999988752 59999999999999874321100 000 000011223467899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...|++|++.++
T Consensus 229 ~~~l~~~~~~~~~G~~~~v~gG 250 (254)
T 2wsb_A 229 ALFLASPAASYVTGAILAVDGG 250 (254)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCcccccccCCEEEECCC
Confidence 999997642 346889998776
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.92 E-value=8.7e-25 Score=212.27 Aligned_cols=216 Identities=15% Similarity=0.116 Sum_probs=162.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.++
T Consensus 26 ~l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~d~~~ 89 (277)
T 3gvc_A 26 DLAGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI------------G----CGAAACRVDVSDEQQ 89 (277)
T ss_dssp -CTTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------------C----SSCEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------C----CcceEEEecCCCHHH
Confidence 456789999999999999999999999999999999988777655433 1 578999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||......
T Consensus 90 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~- 168 (277)
T 3gvc_A 90 IIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPRMIERGGGAIVNLSSLAGQVA- 168 (277)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccC-
Confidence 88776 478999999996432 2334556688999999999988853 56679999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--c-ceeec-cc---CcccCCccCH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--H-NITLS-QE---DTLFGGQVSN 285 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~-~~~~~-~~---~~~~~~~v~~ 285 (446)
......|+.+|..++.+.+ ..|+++++|+||+++++....... . ..... .. ....+.+.++
T Consensus 169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 243 (277)
T 3gvc_A 169 -----VGGTGAYGMSKAGIIQLSRITAAELRSSGIRSNTLLPAFVDTPMQQTAMAMFDGALGAGGARSMIARLQGRMAAP 243 (277)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTCC------CCHHHHHHHHHSSCBCH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCccCchHHHhhhcchhhHHHHhhhhhhhccccCCCCH
Confidence 2345679999999998875 379999999999999874211100 0 00000 00 1223567899
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+|+++++++.+.. ...|++++|.++..
T Consensus 244 edvA~~v~~L~s~~a~~itG~~i~vdGG~~ 273 (277)
T 3gvc_A 244 EEMAGIVVFLLSDDASMITGTTQIADGGTI 273 (277)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHcCCccCCccCcEEEECCcch
Confidence 999999999997643 34689999987753
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=206.06 Aligned_cols=212 Identities=12% Similarity=0.052 Sum_probs=156.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++ ..+.+.+ .+ .++.+|++|.+++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-----------------~~-~~~~~D~~~~~~~ 64 (256)
T 2d1y_A 4 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-----------------GG-AFFQVDLEDERER 64 (256)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-----------------TC-EEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-----------------hC-CEEEeeCCCHHHH
Confidence 456899999999999999999999999999999999876 4433221 24 7889999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||..... ..++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 65 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~- 143 (256)
T 2d1y_A 65 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE- 143 (256)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccccccCCC-
Confidence 8776 4789999999964321 223455688999999999888753 467899999998663321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc----c-ccce-eecccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK----E-THNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~----~-~~~~-~~~~~~~~~~~~v~~~D 287 (446)
.....|+.+|+..|.+.+ ..|+++++|+||++.++..... . .... .........+.+++++|
T Consensus 144 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 218 (256)
T 2d1y_A 144 -----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE 218 (256)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred -----CCChhHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCccCchhhhccccccCCHHHHHHHHhcCCCCCCcCHHH
Confidence 335679999999998775 2589999999999988632110 0 0000 00011122356899999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+++++++.++. ...|++|++.++..
T Consensus 219 vA~~~~~l~s~~~~~~~G~~~~v~gG~~ 246 (256)
T 2d1y_A 219 VAEAVLFLASEKASFITGAILPVDGGMT 246 (256)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHhCchhcCCCCCEEEECCCcc
Confidence 9999999997653 24688999988754
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-25 Score=208.49 Aligned_cols=215 Identities=14% Similarity=0.099 Sum_probs=155.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEE-EEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLEL-VECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~-v~~Dl~d~~~~ 157 (446)
+++||||||+||||++++++|+++|++|+++ +|+.++...+.+.++.. + .++.+ +.+|++|.+++
T Consensus 1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~~D~~~~~~~ 67 (245)
T 2ph3_A 1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRR---------G----SPLVAVLGANLLEAEAA 67 (245)
T ss_dssp CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CSCEEEEECCTTSHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CceEEEEeccCCCHHHH
Confidence 3689999999999999999999999999998 78887776665555432 1 45666 89999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... ...++...+++|+.++.++++++ ++.+.++||++||.......
T Consensus 68 ~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~- 146 (245)
T 2ph3_A 68 TALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVKLMMKARFGRIVNITSVVGILGN- 146 (245)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCEEEEEeChhhccCC-
Confidence 8775 489999999996432 22234556889999966666554 45677899999997543221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...|.+.+ ..|+++++||||+++++...................+.+++++|+|++++
T Consensus 147 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~ 221 (245)
T 2ph3_A 147 -----PGQANYVASKAGLIGFTRAVAKEYAQRGITVNAVAPGFIETEMTERLPQEVKEAYLKQIPAGRFGRPEEVAEAVA 221 (245)
T ss_dssp -----SSBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHHHHHcCeEEEEEEEEeecCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 234679999999887765 25899999999999987422110000000001112346789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.++. ...+++|++.++.
T Consensus 222 ~l~~~~~~~~~G~~~~v~gg~ 242 (245)
T 2ph3_A 222 FLVSEKAGYITGQTLCVDGGL 242 (245)
T ss_dssp HHTSGGGTTCCSCEEEESTTC
T ss_pred HHhCcccccccCCEEEECCCC
Confidence 9997643 2358899997764
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.5e-24 Score=204.43 Aligned_cols=214 Identities=14% Similarity=0.111 Sum_probs=153.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+. ++... .++.. + .++.++.+|++|.++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~---~~~~~---------~----~~~~~~~~Dv~~~~~ 68 (249)
T 2ew8_A 5 LKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEA---AIRNL---------G----RRVLTVKCDVSQPGD 68 (249)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHH---HHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHH---HHHhc---------C----CcEEEEEeecCCHHH
Confidence 4568999999999999999999999999999999998 55443 22211 1 578999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||..+....
T Consensus 69 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 148 (249)
T 2ew8_A 69 VEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI 148 (249)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCeEEEEEcchhhccCC
Confidence 88775 589999999996432 22334556889999998888884 45567899999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcc-ccccc-ceeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDA-YKETH-NITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~-~~~~~-~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+. .|+++++|+||+++++... ..... .-.........+.+++++|+|+
T Consensus 149 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~dva~ 222 (249)
T 2ew8_A 149 ------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTG 222 (249)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHH
T ss_pred ------CCchhHHHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcCcCccchhccccchhhHHHHhhCccCCCCCHHHHHH
Confidence 3456799999999987752 5999999999999987432 11000 0000000022345789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...|+++++.++.
T Consensus 223 ~~~~l~s~~~~~~tG~~~~vdGG~ 246 (249)
T 2ew8_A 223 AAAFLASDDASFITGQTLAVDGGM 246 (249)
T ss_dssp HHHHHTSGGGTTCCSCEEEESSSC
T ss_pred HHHHHcCcccCCCCCcEEEECCCc
Confidence 9999997642 3468899887764
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=209.74 Aligned_cols=216 Identities=16% Similarity=0.128 Sum_probs=164.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... + .++.++.+|++|.+++
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~v 75 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDT---------G----RRALSVGTDITDDAQV 75 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHHH
Confidence 56789999999999999999999999999999999998888777766542 2 5799999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||... .+..++...+++|+.++.++++++.. .+ ++||++||......
T Consensus 76 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~- 153 (264)
T 3ucx_A 76 AHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTPALEESK-GAVVNVNSMVVRHS- 153 (264)
T ss_dssp HHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHT-CEEEEECCGGGGCC-
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CEEEEECcchhccC-
Confidence 8776 47899999998631 12234556688999999999988743 34 69999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----------cceeecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~ 281 (446)
......|+.+|+..+.+.+ ..|+++++|+||+++++....... ............+.
T Consensus 154 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 228 (264)
T 3ucx_A 154 -----QAKYGAYKMAKSALLAMSQTLATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAAAAGSDLKR 228 (264)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSSSSS
T ss_pred -----CCccHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHHhccCCccc
Confidence 2345579999999998765 379999999999999874211000 00000112233456
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+++|+|+++++++.+.. ...|++++|.++.
T Consensus 229 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 261 (264)
T 3ucx_A 229 LPTEDEVASAILFMASDLASGITGQALDVNCGE 261 (264)
T ss_dssp CCBHHHHHHHHHHHHSGGGTTCCSCEEEESTTS
T ss_pred CCCHHHHHHHHHHHcCccccCCCCCEEEECCCc
Confidence 7899999999999997643 3568999998875
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.4e-24 Score=206.20 Aligned_cols=217 Identities=15% Similarity=0.104 Sum_probs=166.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++++|+.++++++.++++.. | .++.++.+|++|.++
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~---------g----~~~~~~~~Dvt~~~~ 70 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGM---------G----KEVLGVKADVSKKKD 70 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence 467899999999999999999999999999999999999988888877653 2 679999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|++|||||... .+.++|+..+++|+.++.++.+++. +++-++||++||......
T Consensus 71 v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~~~ 150 (254)
T 4fn4_A 71 VEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGIRG 150 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCS
T ss_pred HHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhcCC
Confidence 88775 67999999999532 1233466778999999999988874 446679999999876433
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccce---eecccCcccCCccCHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNI---TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~~---~~~~~~~~~~~~v~~~D 287 (446)
. .....|..+|..+..+.+ .+|++++.|.||++.++.... ...... .........+.+..++|
T Consensus 151 ~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~R~g~ped 224 (254)
T 4fn4_A 151 G------FAGAPYTVAKHGLIGLTRSIAAHYGDQGIRAVAVLPGTVKTNIGLGSSKPSELGMRTLTKLMSLSSRLAEPED 224 (254)
T ss_dssp S------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSCTTSCSSCCHHHHHHHHHHHTTCCCCBCHHH
T ss_pred C------CCChHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCCCCcccccccCCcHHHHHHHHhcCCCCCCCcCHHH
Confidence 2 234579999999988766 379999999999998773211 100000 01111123456789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
||+++++|+.+.. ...|+++.|-++
T Consensus 225 iA~~v~fLaSd~a~~iTG~~i~VDGG 250 (254)
T 4fn4_A 225 IANVIVFLASDEASFVNGDAVVVDGG 250 (254)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHhCchhcCCcCCEEEeCCC
Confidence 9999999997653 347888888766
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-24 Score=208.86 Aligned_cols=223 Identities=13% Similarity=0.107 Sum_probs=161.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+.+... ....++.++.+|++|.++
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~D~~~~~~ 72 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-----------FEPQKTLFIQCDVADQQQ 72 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-----------SCGGGEEEEECCTTSHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhh-----------cCCCceEEEecCCCCHHH
Confidence 456789999999999999999999999999999999987766554443211 011468999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHH----HhCC---CCEEEEEccccccCCCCch
Q 013273 157 IEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA----TIAK---VNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa----~~~~---v~r~V~vSS~~~~~~~~~~ 222 (446)
+++++ +++|+||||||... ..++...+++|+.++.++++++ ++.+ .++||++||..+....
T Consensus 73 v~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~--- 147 (267)
T 2gdz_A 73 LRDTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV--- 147 (267)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC---
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC--hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccccCCC---
Confidence 88776 36899999999753 3455667889998776665555 3332 5799999998764321
Q ss_pred hhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccc----ee-ecc---cCcccCCccCH
Q 013273 223 AILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHN----IT-LSQ---EDTLFGGQVSN 285 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~----~~-~~~---~~~~~~~~v~~ 285 (446)
.....|+.+|..++.+.+ ..|+++++|+||++.++......... .. ... ......+++++
T Consensus 148 ---~~~~~Y~~sK~a~~~~~~~~ala~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (267)
T 2gdz_A 148 ---AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDP 224 (267)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHHhccCCcEEEEEecCcCcchhhhccccccccchhhhHHHHHHHHhccccCCCH
Confidence 234579999998886654 36999999999999887321100000 00 000 00112357899
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhh
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTAPLTP 319 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~ 319 (446)
+|+|+++++++.++. ..|++|+|.++...++.+
T Consensus 225 ~dvA~~v~~l~s~~~-~~G~~~~v~gg~~~~~~~ 257 (267)
T 2gdz_A 225 PLIANGLITLIEDDA-LNGAIMKITTSKGIHFQD 257 (267)
T ss_dssp HHHHHHHHHHHHCTT-CSSCEEEEETTTEEEECC
T ss_pred HHHHHHHHHHhcCcC-CCCcEEEecCCCcccccC
Confidence 999999999999875 678999999887655544
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=209.82 Aligned_cols=218 Identities=13% Similarity=0.115 Sum_probs=164.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.++
T Consensus 24 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~d~~~ 87 (277)
T 4dqx_A 24 DLNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEI------------G----SKAFGVRVDVSSAKD 87 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH------------C----TTEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CceEEEEecCCCHHH
Confidence 356789999999999999999999999999999999988776655432 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.|+.++++++. +.+.++||++||..+...
T Consensus 88 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 166 (277)
T 4dqx_A 88 AESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTATSA- 166 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhCcC-
Confidence 887763 79999999996432 223345567899999999998884 345669999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCC-ccccc-ccc-eee---cccCcccCCccCHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT-DAYKE-THN-ITL---SQEDTLFGGQVSNL 286 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~-~~~~~-~~~-~~~---~~~~~~~~~~v~~~ 286 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++. ..... ... ... .......+.+.+++
T Consensus 167 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~pe 241 (277)
T 4dqx_A 167 -----IADRTAYVASKGAISSLTRAMAMDHAKEGIRVNAVAPGTIDSPYFTKIFAEAKDPAKLRSDFNARAVMDRMGTAE 241 (277)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHHTCSCHHHHHHHHHTTSTTCSCBCHH
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCchhhhhcccccchhHHHHHHHhcCcccCCcCHH
Confidence 2345679999999998765 268999999999999874 11100 000 000 11223345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
|+|+++++++.+.. ...|+++++.++....
T Consensus 242 dvA~~v~~L~s~~~~~itG~~i~vdGG~~~~ 272 (277)
T 4dqx_A 242 EIAEAMLFLASDRSRFATGSILTVDGGSSIG 272 (277)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSSSSSC
T ss_pred HHHHHHHHHhCCccCCCcCCEEEECCchhhh
Confidence 99999999997653 3468999998886543
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.1e-24 Score=208.57 Aligned_cols=218 Identities=16% Similarity=0.172 Sum_probs=155.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|.++++||||||+|+||++++++|+++|++|+++ .|+.+..+.+.+.++.. + .++.++.+|++|.+
T Consensus 23 m~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~ 89 (272)
T 4e3z_A 23 MSDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITES---------G----GEAVAIPGDVGNAA 89 (272)
T ss_dssp -CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CEEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhc---------C----CcEEEEEcCCCCHH
Confidence 4556899999999999999999999999999887 66777666666555432 2 57999999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC-------CCCEEEEEcccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~-------~v~r~V~vSS~~ 214 (446)
++++++ +++|+||||||.... +..++...+++|+.++.++++++... +.++||++||..
T Consensus 90 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~ 169 (272)
T 4e3z_A 90 DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVRRMSRLYSGQGGAIVNVSSMA 169 (272)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCTH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHhccCCCCEEEEEcchH
Confidence 888776 378999999996532 22334566889999999999888643 356899999976
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cceeecccCcccCCccCHH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~~~~~~~~~~~~v~~~ 286 (446)
...... ..+..|+.+|...|.+.+ ..|+++++|+||+++++....... ............+.+.+++
T Consensus 170 ~~~~~~-----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~e 244 (272)
T 4e3z_A 170 AILGSA-----TQYVDYAASKAAIDTFTIGLAREVAAEGIRVNAVRPGIIETDLHASGGLPDRAREMAPSVPMQRAGMPE 244 (272)
T ss_dssp HHHCCT-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC------------------CCTTSSCBCHH
T ss_pred hccCCC-----CCcchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEecCCCcCCcccccCChHHHHHHhhcCCcCCCcCHH
Confidence 533211 234569999999998765 259999999999999884321100 0011111122344568899
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|+|+++++++.+.. ...|++|+|.++
T Consensus 245 dvA~~i~~l~s~~~~~~tG~~i~vdgG 271 (272)
T 4e3z_A 245 EVADAILYLLSPSASYVTGSILNVSGG 271 (272)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCCccccccCCEEeecCC
Confidence 99999999997543 246899999776
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-25 Score=211.90 Aligned_cols=218 Identities=14% Similarity=0.104 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++||||||+||||++++++|+++|++|++++|+ .++...+.++++.. + .++.++.+|++|.++
T Consensus 5 l~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 71 (258)
T 3afn_B 5 LKGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRAD---------G----GDAAFFAADLATSEA 71 (258)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHT---------T----CEEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhc---------C----CceEEEECCCCCHHH
Confidence 456899999999999999999999999999999999 77777666555432 1 578999999999999
Q ss_pred HHHHhc-------CCCEEEEcccC-CCC------ccCCCCCcccchHHHHHHHHHHHHh----CC--C---CEEEEEccc
Q 013273 157 IEPALG-------NASVVICCIGA-SEK------EVFDITGPYRIDFQATKNLVDAATI----AK--V---NHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~-~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v---~r~V~vSS~ 213 (446)
++++++ ++|+||||||. ... +..++...+++|+.++.++++++.. .+ . ++||++||.
T Consensus 72 ~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 151 (258)
T 3afn_B 72 CQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALPHLAAAAKASGQTSAVISTGSI 151 (258)
T ss_dssp HHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTSCEEEEEECCT
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcccCCCCCcEEEEecch
Confidence 988875 89999999996 321 1122445678999999999887743 22 2 699999997
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHH
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~ 286 (446)
.....+ ..+...|+.+|+..|.+++. .|+++++||||+++++...................+.+++++
T Consensus 152 ~~~~~~-----~~~~~~Y~~sK~a~~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (258)
T 3afn_B 152 AGHTGG-----GPGAGLYGAAKAFLHNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHADKTQDVRDRISNGIPMGRFGTAE 226 (258)
T ss_dssp HHHHCC-----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTTCCHHHHHHHHTTCTTCSCBCGG
T ss_pred hhccCC-----CCCchHHHHHHHHHHHHHHHHHHhhcccCeEEEEEeCCCcccccccccCHHHHHHHhccCCCCcCCCHH
Confidence 653311 13456799999999988752 489999999999998853211000000001112334679999
Q ss_pred HHHHHHHHHHhCCC--CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS--LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~--~~~~~v~ni~~~~ 313 (446)
|+|+++++++.++. ...+++|++.++.
T Consensus 227 dva~~~~~l~~~~~~~~~~G~~~~v~gg~ 255 (258)
T 3afn_B 227 EMAPAFLFFASHLASGYITGQVLDINGGQ 255 (258)
T ss_dssp GTHHHHHHHHCHHHHTTCCSEEEEESTTS
T ss_pred HHHHHHHHHhCcchhccccCCEEeECCCc
Confidence 99999999997542 2358899998764
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=206.05 Aligned_cols=215 Identities=15% Similarity=0.150 Sum_probs=159.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|||||+|+||+++++.|+++|++|++++|+.++ ...+.++++.. + .++.++.+|++|.+++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~v 68 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAA---------D----QKAVFVGLDVTDKANF 68 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTT---------T----CCEEEEECCTTCHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 4789999999999999999999999999999999876 55555544321 1 5789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCC-CEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKV-NHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v-~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+. ++||++||......
T Consensus 69 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~- 147 (258)
T 3a28_C 69 DSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRKFDELGVKGKIINAASIAAIQG- 147 (258)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCCEEEEECCGGGTSC-
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCcEEEEECcchhccC-
Confidence 87764 89999999996432 2234556688999999999988864 366 79999999866332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--------c--cc-eeecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--------T--HN-ITLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--------~--~~-~~~~~~~~~~~~ 281 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...... . .. ..........+.
T Consensus 148 -----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 222 (258)
T 3a28_C 148 -----FPILSAYSTTKFAVRGLTQAAAQELAPKGHTVNAYAPGIVGTGMWEQIDAELSKINGKPIGENFKEYSSSIALGR 222 (258)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSHHHHHHHHHHHHHHCCCTTHHHHHHHTTCTTSS
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHHHhhCeEEEEEECCccCChhhhhhhhhhccccCCchHHHHHHHHhcCCCCC
Confidence 1335679999999997765 26999999999999876321100 0 00 000001122345
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+++|+|+++++++.+.. ...|+++++.++.
T Consensus 223 ~~~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 255 (258)
T 3a28_C 223 PSVPEDVAGLVSFLASENSNYVTGQVMLVDGGM 255 (258)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred ccCHHHHHHHHHHHhCcccCCCCCCEEEECCCE
Confidence 7899999999999997643 3468899988774
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-24 Score=208.93 Aligned_cols=217 Identities=14% Similarity=0.104 Sum_probs=158.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+.++.. + .++.++.+|++|.+++
T Consensus 42 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~d~~~v 108 (285)
T 2c07_A 42 GENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---------G----YESSGYAGDVSKKEEI 108 (285)
T ss_dssp CSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhc---------C----CceeEEECCCCCHHHH
Confidence 55689999999999999999999999999999999987777665555431 1 5789999999999998
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... ...++...+++|+.++.++++++. +.+.++||++||..+....
T Consensus 109 ~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~~- 187 (285)
T 2c07_A 109 SEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTGN- 187 (285)
T ss_dssp HHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC-
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEECChhhccCC-
Confidence 8876 479999999996532 222344568899999888887775 4567899999998653221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...|.+++ ..|+++++||||+++++...................+.+++++|+|++++
T Consensus 188 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~ 262 (285)
T 2c07_A 188 -----VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANLAC 262 (285)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcEecCchhhcCHHHHHHHHhhCCCCCCCCHHHHHHHHH
Confidence 234579999999987765 25899999999999987422110000000001122345799999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.++. ...|++|++.++.
T Consensus 263 ~l~~~~~~~~~G~~i~v~gG~ 283 (285)
T 2c07_A 263 FLSSDKSGYINGRVFVIDGGL 283 (285)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCCCcCCCCCCEEEeCCCc
Confidence 9997643 2468899987764
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=207.98 Aligned_cols=215 Identities=13% Similarity=0.053 Sum_probs=157.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.+ ..+.+++... + .++.++.+|++|.+++
T Consensus 2 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~---------~----~~~~~~~~D~~~~~~v 66 (255)
T 2q2v_A 2 LKGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARH---------G----VKAVHHPADLSDVAQI 66 (255)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTT---------S----CCEEEECCCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhc---------C----CceEEEeCCCCCHHHH
Confidence 35689999999999999999999999999999999876 3333333221 1 4688999999999999
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||..+....
T Consensus 67 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 145 (255)
T 2q2v_A 67 EALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPGMRARNWGRIINIASVHGLVGS- 145 (255)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcCchhccCC-
Confidence 88875 89999999996432 22334556889999887777665 45677899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc----cc---c----eeecccCcccCCc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE----TH---N----ITLSQEDTLFGGQ 282 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~----~~---~----~~~~~~~~~~~~~ 282 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++...... .. . ..+.......+.+
T Consensus 146 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 220 (255)
T 2q2v_A 146 -----TGKAAYVAAKHGVVGLTKVVGLETATSNVTCNAICPGWVLTPLVQKQIDDRAANGGDPLQAQHDLLAEKQPSLAF 220 (255)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEESSBCCHHHHHHHHHHHHHTCCHHHHHHHHHTTTCTTCCC
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCCCcCcchhhhcccccccccchHHHHHHHHhccCCCCCC
Confidence 235679999999998776 26899999999999987422110 00 0 0000112234568
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|+|+++++++.++. ...|++|++.++.
T Consensus 221 ~~~~dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 252 (255)
T 2q2v_A 221 VTPEHLGELVLFLCSEAGSQVRGAAWNVDGGW 252 (255)
T ss_dssp BCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCCccCCCCCCEEEECCCc
Confidence 999999999999997643 2358899988763
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=207.16 Aligned_cols=219 Identities=12% Similarity=0.109 Sum_probs=166.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.++
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~d~~~ 95 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGV---------G----GKALPIRCDVTQPDQ 95 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---------T----CCCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHHH
Confidence 456789999999999999999999999999999999998888877766542 2 578999999999999
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++||++||......
T Consensus 96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~g~iv~isS~~~~~~ 175 (276)
T 3r1i_A 96 VRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARAMVDQGLGGTIITTASMSGHII 175 (276)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEECchHhccc
Confidence 888774 89999999996532 2233455678999999999988854 23 368999999766332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.. ......|+.+|...+.+.+ ..|+++++|+||++.++....... ...........+.+.+++|+|++
T Consensus 176 ~~----~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~p~~r~~~pedvA~~ 250 (276)
T 3r1i_A 176 NI----PQQVSHYCTSKAAVVHLTKAMAVELAPHQIRVNSVSPGYIRTELVEPLAD-YHALWEPKIPLGRMGRPEELTGL 250 (276)
T ss_dssp CC----SSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSTTTGGGGG-GHHHHGGGSTTSSCBCGGGSHHH
T ss_pred CC----CCCcchHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccccchH-HHHHHHhcCCCCCCcCHHHHHHH
Confidence 21 1235679999999998875 268999999999999885322111 01111122234567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...|++++|.++.
T Consensus 251 v~fL~s~~~~~itG~~i~vdGG~ 273 (276)
T 3r1i_A 251 YLYLASAASSYMTGSDIVIDGGY 273 (276)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHcCccccCccCcEEEECcCc
Confidence 999998643 3468999987774
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.9e-24 Score=205.07 Aligned_cols=212 Identities=13% Similarity=0.056 Sum_probs=154.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++.... +.. .++.++.+|++|.++
T Consensus 24 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~---~~~---------------~~~~~~~~Dv~~~~~ 85 (260)
T 3gem_A 24 TLSSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTE---LRQ---------------AGAVALYGDFSCETG 85 (260)
T ss_dssp ---CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHH---HHH---------------HTCEEEECCTTSHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHH---HHh---------------cCCeEEECCCCCHHH
Confidence 35678999999999999999999999999999999998765332 222 247899999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCc-----cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||.......
T Consensus 86 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~~- 164 (260)
T 3gem_A 86 IMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLTASEVADIVHISDDVTRKGS- 164 (260)
T ss_dssp HHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGTCC-
T ss_pred HHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEEECChhhcCCC-
Confidence 88776 4789999999964322 22344568899999999998885 3466799999998764332
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|+..+.+.+. .++++++|+||++.++....... ..........+.+.+++|+|+++++
T Consensus 165 -----~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~t~~~~~~~~--~~~~~~~~p~~r~~~~edva~~v~~ 237 (260)
T 3gem_A 165 -----SKHIAYCATKAGLESLTLSFAARFAPLVKVNGIAPALLMFQPKDDAAY--RANALAKSALGIEPGAEVIYQSLRY 237 (260)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECTTCC-----------------CCSCCCCCTHHHHHHHHH
T ss_pred -----CCcHhHHHHHHHHHHHHHHHHHHHCCCCEEEEEeecccccCCCCCHHH--HHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 3456799999999988752 46999999999998874321111 1111112234456789999999999
Q ss_pred HHhCCCCCCCcEEEEecCCCC
Q 013273 295 MAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+++... ..|++|+|.++..+
T Consensus 238 L~~~~~-itG~~i~vdGG~~~ 257 (260)
T 3gem_A 238 LLDSTY-VTGTTLTVNGGRHV 257 (260)
T ss_dssp HHHCSS-CCSCEEEESTTTTT
T ss_pred HhhCCC-CCCCEEEECCCccc
Confidence 996544 67899999887643
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.92 E-value=1.9e-24 Score=208.49 Aligned_cols=219 Identities=16% Similarity=0.108 Sum_probs=165.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... .+ .++.++.+|++|.++
T Consensus 17 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dv~~~~~ 84 (266)
T 4egf_A 17 RLDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQ--------FG----TDVHTVAIDLAEPDA 84 (266)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HC----CCEEEEECCTTSTTH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--------cC----CcEEEEEecCCCHHH
Confidence 356789999999999999999999999999999999998888776666532 02 579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----C-CCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----K-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~-v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++... + .++||++||......
T Consensus 85 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 164 (266)
T 4egf_A 85 PAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKAMVAAGEGGAIITVASAAALAP 164 (266)
T ss_dssp HHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEEEcchhhccC
Confidence 88776 489999999996532 22334566889999999999888532 3 459999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--ccceeecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++...... .............+.+.+++|+|
T Consensus 165 ------~~~~~~Y~asK~a~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dva 238 (266)
T 4egf_A 165 ------LPDHYAYCTSKAGLVMATKVLARELGPHGIRANSVCPTVVLTEMGQRVWGDEAKSAPMIARIPLGRFAVPHEVS 238 (266)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBCSHHHHHHTCSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred ------CCCChHHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeCCCcCchhhhhccChHHHHHHHhcCCCCCCcCHHHHH
Confidence 2345679999999998765 26899999999999987321110 00000011123345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.+.. ...|++++|.++.
T Consensus 239 ~~v~~L~s~~~~~itG~~i~vdGG~ 263 (266)
T 4egf_A 239 DAVVWLASDAASMINGVDIPVDGGY 263 (266)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhcCccCcEEEECCCc
Confidence 99999998643 3568999998774
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.92 E-value=7.8e-24 Score=205.07 Aligned_cols=222 Identities=14% Similarity=0.096 Sum_probs=162.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC------------chhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~------------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+ .+....+.+.++.. + .++
T Consensus 10 ~l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 76 (278)
T 3sx2_A 10 PLTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDI---------G----SRI 76 (278)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHH---------T----CCE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhc---------C----CeE
Confidence 3567899999999999999999999999999999987 44444444444332 2 679
Q ss_pred EEEEcCCCChhcHHHHhc-------CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEE
Q 013273 145 ELVECDLEKRVQIEPALG-------NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMV 210 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~v 210 (446)
.++.+|++|.++++++++ ++|+||||||.... ...++...+++|+.++.++++++.. .+ .++||++
T Consensus 77 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~i 156 (278)
T 3sx2_A 77 VARQADVRDRESLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLI 156 (278)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 999999999999888774 89999999996532 2344567789999999999998743 22 4699999
Q ss_pred ccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc----------cceeec
Q 013273 211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET----------HNITLS 273 (446)
Q Consensus 211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~----------~~~~~~ 273 (446)
||........ ........|+.+|+..+.+.+ ..|+++++|+||+++++....... ......
T Consensus 157 sS~~~~~~~~--~~~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~ 234 (278)
T 3sx2_A 157 SSSAGLAGVG--SADPGSVGYVAAKHGVVGLMRVYANLLAGQMIRVNSIHPSGVETPMINNEFTREWLAKMAAATDTPGA 234 (278)
T ss_dssp CCGGGTSCCC--CSSHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHHHHHHHCC--CT
T ss_pred ccHHhcCCCc--cCCCCchHhHHHHHHHHHHHHHHHHHHhccCcEEEEEecCCccCccchhhhHHHHHhhccchhhhhhh
Confidence 9986633211 112345679999999998765 368999999999999985321000 000000
Q ss_pred ccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 274 QEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 274 ~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
......+.+++++|+|+++++++.+.. ...|++++|.++.
T Consensus 235 ~~~~~p~~~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG~ 275 (278)
T 3sx2_A 235 MGNAMPVEVLAPEDVANAVAWLVSDQARYITGVTLPVDAGF 275 (278)
T ss_dssp TSCSSSCSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTT
T ss_pred hhhhcCcCcCCHHHHHHHHHHHhCcccccccCCEEeECCCc
Confidence 111122567899999999999997643 3568999998774
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=206.58 Aligned_cols=211 Identities=15% Similarity=0.117 Sum_probs=155.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||++++++|+++|++|++++|+.+..... . + .++.++.+|++|.+++
T Consensus 7 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~------~---------~----~~~~~~~~D~~~~~~v 67 (257)
T 3tl3_A 7 IRDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVVAD------L---------G----DRARFAAADVTDEAAV 67 (257)
T ss_dssp ---CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHHHH------T---------C----TTEEEEECCTTCHHHH
T ss_pred ecCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHHHh------c---------C----CceEEEECCCCCHHHH
Confidence 5678999999999999999999999999999999976543221 1 1 5799999999999998
Q ss_pred HHHhc------CCCEEEEcccCCC----------CccCCCCCcccchHHHHHHHHHHHHhC------------CCCEEEE
Q 013273 158 EPALG------NASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA------------KVNHFIM 209 (446)
Q Consensus 158 ~~a~~------~~D~VI~~Ag~~~----------~~~~~~~~~~~vNv~g~~~l~~aa~~~------------~v~r~V~ 209 (446)
+++++ ++|+||||||... .+..+++..+++|+.++.++++++... +.++||+
T Consensus 68 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~~~~~~g~iv~ 147 (257)
T 3tl3_A 68 ASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLAAERIAKTEPVGPNAEERGVIIN 147 (257)
T ss_dssp HHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC--CCCCSEEEEE
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccccccCCCcEEEE
Confidence 88774 8999999999642 233446677899999999999998642 3458999
Q ss_pred EccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCC
Q 013273 210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGG 281 (446)
Q Consensus 210 vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~ 281 (446)
+||...... ......|+.+|...+.+.+ ..|+++++|+||++.++...... .....+.......+.
T Consensus 148 isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r 221 (257)
T 3tl3_A 148 TASVAAFDG------QIGQAAYSASKGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLASLPEEARASLGKQVPHPSR 221 (257)
T ss_dssp ECCCC--CC------HHHHHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC---CHHHHHHHHHTSSSSCS
T ss_pred EcchhhcCC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhhccHHHHHHHHhcCCCCCC
Confidence 999876432 2345689999999987765 36899999999999987432110 000001111111256
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 013273 282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~ 314 (446)
+.+++|+|+++++++.++. ..|+++++.++..
T Consensus 222 ~~~p~dva~~v~~l~s~~~-itG~~i~vdGG~~ 253 (257)
T 3tl3_A 222 LGNPDEYGALAVHIIENPM-LNGEVIRLDGAIR 253 (257)
T ss_dssp CBCHHHHHHHHHHHHHCTT-CCSCEEEESTTC-
T ss_pred ccCHHHHHHHHHHHhcCCC-CCCCEEEECCCcc
Confidence 7899999999999999843 6799999988754
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-24 Score=205.18 Aligned_cols=204 Identities=17% Similarity=0.106 Sum_probs=153.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||++++++|+++|++|++++|+.+ . .++.++.+|++|.+++++
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~-~------------------------~~~~~~~~D~~~~~~~~~ 56 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE-G------------------------EDLIYVEGDVTREEDVRR 56 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC-S------------------------SSSEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc-c------------------------cceEEEeCCCCCHHHHHH
Confidence 478999999999999999999999999999999864 1 457899999999999998
Q ss_pred Hhc------CCCEEEEcccCCCCcc------C----CCCCcccchHHHHHHHHHHHHhC----C------CCEEEEEccc
Q 013273 160 ALG------NASVVICCIGASEKEV------F----DITGPYRIDFQATKNLVDAATIA----K------VNHFIMVSSL 213 (446)
Q Consensus 160 a~~------~~D~VI~~Ag~~~~~~------~----~~~~~~~vNv~g~~~l~~aa~~~----~------v~r~V~vSS~ 213 (446)
+++ ++|+||||||...... . ++...+++|+.++.++++++.+. + .++||++||.
T Consensus 57 ~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 136 (242)
T 1uay_A 57 AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV 136 (242)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT
T ss_pred HHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCCh
Confidence 886 8899999999643211 1 34456789999999999998653 1 1299999998
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCccc-CCccCH
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLF-GGQVSN 285 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~-~~~v~~ 285 (446)
.+... ..+...|+.+|...|.+++ ..|+++++||||+++++................... +.++++
T Consensus 137 ~~~~~------~~~~~~Y~~sK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (242)
T 1uay_A 137 AAFEG------QIGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRP 210 (242)
T ss_dssp HHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCH
T ss_pred hhccC------CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhccchhHHHHHHhhCCCcccCCCH
Confidence 66332 1345679999999987765 259999999999999874221110000000011122 567899
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+|+|+++++++.+. ...|++|++.++...
T Consensus 211 ~dva~~~~~l~~~~-~~~G~~~~v~gG~~~ 239 (242)
T 1uay_A 211 EEYAALVLHILENP-MLNGEVVRLDGALRM 239 (242)
T ss_dssp HHHHHHHHHHHHCT-TCCSCEEEESTTCCC
T ss_pred HHHHHHHHHHhcCC-CCCCcEEEEcCCeec
Confidence 99999999999984 357899999887644
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.92 E-value=4.4e-24 Score=206.03 Aligned_cols=219 Identities=14% Similarity=0.114 Sum_probs=159.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++.++++|||||+|+||+++++.|+++|++|++++| +......+.+.+... ..++.++.+|++|.+
T Consensus 22 ~~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dl~~~~ 88 (269)
T 3gk3_A 22 MQAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDA-------------GRDFKAYAVDVADFE 88 (269)
T ss_dssp --CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTT-------------TCCCEEEECCTTCHH
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhc-------------CCceEEEEecCCCHH
Confidence 466789999999999999999999999999999984 444444443333221 267999999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCC
Q 013273 156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~ 218 (446)
+++++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||......
T Consensus 89 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 168 (269)
T 3gk3_A 89 SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAGMVERRFGRIVNIGSVNGSRG 168 (269)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEeCChhhccC
Confidence 8887763 89999999996532 2233455688999999999988753 46679999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++........... ........+.+.+++|+|+
T Consensus 169 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~ 242 (269)
T 3gk3_A 169 ------AFGQANYASAKAGIHGFTKTLALETAKRGITVNTVSPGYLATAMVEAVPQDVLEAKILPQIPVGRLGRPDEVAA 242 (269)
T ss_dssp ------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTTC-------CCSGGGCTTSSCBCHHHHHH
T ss_pred ------CCCcchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCcccchhhhhhchhHHHHHhhhcCCcCCccCHHHHHH
Confidence 1345679999999887765 2689999999999998743211111111 1112233456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++++.+.. ...|++|++.++..
T Consensus 243 ~v~~L~s~~~~~itG~~i~vdgG~~ 267 (269)
T 3gk3_A 243 LIAFLCSDDAGFVTGADLAINGGMH 267 (269)
T ss_dssp HHHHHTSTTCTTCCSCEEEESTTSC
T ss_pred HHHHHhCCCcCCeeCcEEEECCCEe
Confidence 9999998654 35689999988754
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.92 E-value=2.8e-24 Score=208.48 Aligned_cols=216 Identities=12% Similarity=0.091 Sum_probs=159.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. .+++.++.+|++|.+++
T Consensus 27 l~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~--------------~~~~~~~~~Dv~d~~~v 92 (276)
T 2b4q_A 27 LAGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSA--------------YGDCQAIPADLSSEAGA 92 (276)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTT--------------SSCEEECCCCTTSHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHh--------------cCceEEEEeeCCCHHHH
Confidence 5678999999999999999999999999999999998777665544421 13688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCC----CEEEEEcccccc
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV----NHFIMVSSLGTN 216 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v----~r~V~vSS~~~~ 216 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+. ++||++||..+.
T Consensus 93 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~g~iV~isS~~~~ 172 (276)
T 2b4q_A 93 RRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLLRRSASAENPARVINIGSVAGI 172 (276)
T ss_dssp HHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHHHHHCCSSSCEEEEEECCGGGT
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCCCCEEEEECCHHHc
Confidence 87763 79999999996432 222345568899999988888774 3344 799999998764
Q ss_pred CCCCchhhhchhh-HHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeeccc--CcccCCccCHH
Q 013273 217 KFGFPAAILNLFW-GVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQE--DTLFGGQVSNL 286 (446)
Q Consensus 217 ~~~~~~~~~~~~~-~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~--~~~~~~~v~~~ 286 (446)
... .... .|+.+|..+|.+.+ ..|+++++|+||++.++............... ....+.+++++
T Consensus 173 ~~~------~~~~~~Y~asK~a~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 246 (276)
T 2b4q_A 173 SAM------GEQAYAYGPSKAALHQLSRMLAKELVGEHINVNVIAPGRFPSRMTRHIANDPQALEADSASIPMGRWGRPE 246 (276)
T ss_dssp CCC------CCSCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSTTTHHHHHCHHHHHHHHHTSTTSSCCCHH
T ss_pred CCC------CCCccccHHHHHHHHHHHHHHHHHhcccCeEEEEEEeccCcCcchhhcchhHHHHHHhhcCCCCCCcCCHH
Confidence 321 1223 69999999998775 26999999999999987432110000000001 12235678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++++.++. ...|++|++.++.
T Consensus 247 dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 274 (276)
T 2b4q_A 247 EMAALAISLAGTAGAYMTGNVIPIDGGF 274 (276)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHHhCccccCCCCCEEEeCCCc
Confidence 99999999997643 3468899887763
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.92 E-value=5.3e-24 Score=203.77 Aligned_cols=203 Identities=13% Similarity=0.076 Sum_probs=146.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~v 71 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAA---------G----GRIVARSLDARNEDEV 71 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHT---------T----CEEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CeEEEEECcCCCHHHH
Confidence 45789999999999999999999999999999999999988887776543 2 5799999999999999
Q ss_pred HHHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 72 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 149 (252)
T 3h7a_A 72 TAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLMLAHGQGKIFFTGATASLRGG-- 149 (252)
T ss_dssp HHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTCCC--
T ss_pred HHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHHcCCC--
Confidence 88874 78999999996432 223345668899999999988874 4466799999998764321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCE-EEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPY-TIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~-tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+.+ ..|+++ ++|+||++.++................... ++++++|+|++++
T Consensus 150 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~n~v~PG~v~T~~~~~~~~~~~~~~~~~~~~-~~~~pedvA~~~~ 224 (252)
T 3h7a_A 150 ----SGFAAFASAKFGLRAVAQSMARELMPKNIHVAHLIIDSGVDTAWVRERREQMFGKDALANPD-LLMPPAAVAGAYW 224 (252)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC----------------------------CCHHHHHHHHH
T ss_pred ----CCCccHHHHHHHHHHHHHHHHHHhhhcCCEEEEEecCCccCChhhhccchhhhhhhhhcCCc-cCCCHHHHHHHHH
Confidence 345679999999997765 368999 899999998874221111100001111122 3899999999999
Q ss_pred HHHhCCC
Q 013273 294 CMAKNRS 300 (446)
Q Consensus 294 ~ll~~~~ 300 (446)
+++.++.
T Consensus 225 ~l~s~~~ 231 (252)
T 3h7a_A 225 QLYQQPK 231 (252)
T ss_dssp HHHHCCG
T ss_pred HHHhCch
Confidence 9999765
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.4e-24 Score=207.00 Aligned_cols=215 Identities=13% Similarity=0.082 Sum_probs=161.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++++++|||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.++
T Consensus 3 ~l~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~~~~~ 66 (247)
T 3rwb_A 3 RLAGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI------------G----KKARAIAADISDPGS 66 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------------C----TTEEECCCCTTCHHH
T ss_pred CcCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------C----CceEEEEcCCCCHHH
Confidence 356789999999999999999999999999999999988777655433 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCC-CCEEEEEccccccCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAK-VNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~-v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+ .++||++||......
T Consensus 67 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 146 (247)
T 3rwb_A 67 VKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQMRAAGKAGRVISIASNTFFAG 146 (247)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCTHHHHT
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCcEEEEECchhhccC
Confidence 888764 79999999996432 23345567899999999999885 4444 579999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cceeecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++....... ............+.+.+++|+|+
T Consensus 147 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~r~~~pedva~ 220 (247)
T 3rwb_A 147 ------TPNMAAYVAAKGGVIGFTRALATELGKYNITANAVTPGLIESDGVKASPHNEAFGFVEMLQAMKGKGQPEHIAD 220 (247)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSGGGGGHHHHHHHSSSCSCBCHHHHHH
T ss_pred ------CCCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCcCccccccChhHHHHHHhcccccCCCcCHHHHHH
Confidence 1345679999999987765 269999999999998863211100 00000011123456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...|+++++.++.
T Consensus 221 ~v~~L~s~~~~~itG~~i~vdGG~ 244 (247)
T 3rwb_A 221 VVSFLASDDARWITGQTLNVDAGM 244 (247)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHHhCccccCCCCCEEEECCCc
Confidence 9999998653 3468999987764
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=202.90 Aligned_cols=207 Identities=12% Similarity=0.101 Sum_probs=147.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.+.. . .++.++.+|++|.+++
T Consensus 5 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~-------------------~----~~~~~~~~D~~d~~~~ 61 (250)
T 2fwm_X 5 FSGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQE-------------------Q----YPFATEVMDVADAAQV 61 (250)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCSS-------------------C----CSSEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhhh-------------------c----CCceEEEcCCCCHHHH
Confidence 4568999999999999999999999999999999986420 0 1378899999999998
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||..+...
T Consensus 62 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~~~-- 139 (250)
T 2fwm_X 62 AQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFRRQRGGAIVTVASDAAHTP-- 139 (250)
T ss_dssp HHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC--
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC--
Confidence 88774 79999999996432 22335566889999999999888 4556789999999876432
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCccccc-ccce---eecc------cCcccCCcc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKE-THNI---TLSQ------EDTLFGGQV 283 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~-~~~~---~~~~------~~~~~~~~v 283 (446)
......|+.+|...|.+.+. .|+++++||||+++++...... .... .+.. .....+.++
T Consensus 140 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (250)
T 2fwm_X 140 ----RIGMSAYGASKAALKSLALSVGLELAGSGVRCNVVSPGSTDTDMQRTLWVSDDAEEQRIRGFGEQFKLGIPLGKIA 215 (250)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------------------
T ss_pred ----CCCCchHHHHHHHHHHHHHHHHHHhCccCCEEEEEECCcccCccccccccChhHHHHHHhhhhhcccccCCCCCCc
Confidence 13456799999999987652 5999999999999988432110 0000 0000 011234578
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+|+++++++.++. ...|+++++.++.
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (250)
T 2fwm_X 216 RPQEIANTILFLASDLASHITLQDIVVDGGS 246 (250)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred CHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 99999999999998643 3468899988774
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-24 Score=207.36 Aligned_cols=217 Identities=14% Similarity=0.107 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++ .++.++.+|++|.+++
T Consensus 7 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~Dv~d~~~v 69 (270)
T 1yde_A 7 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------------PGAVFILCDVTQEDDV 69 (270)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----------------cCCeEEEcCCCCHHHH
Confidence 45789999999999999999999999999999999987766543321 3588999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||.......
T Consensus 70 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~~- 148 (270)
T 1yde_A 70 KTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ- 148 (270)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCEEEEEcCccccCCC-
Confidence 87763 79999999996431 12234566889999999999988531 24799999997543221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc-cc----eeecccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET-HN----ITLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~-~~----~~~~~~~~~~~~~v~~~D 287 (446)
.....|+.+|...+.+.+ .+|+++++||||+++++..... .. .. +.........+.+.+++|
T Consensus 149 -----~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~d 223 (270)
T 1yde_A 149 -----AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPAE 223 (270)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHHH
T ss_pred -----CCCcccHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCccccchhhhhhhcccchHHHHHHHhhcCCCCCCcCHHH
Confidence 234579999999998765 2699999999999998742110 00 00 000001123455789999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCh
Q 013273 288 VAELLACMAKNRSLSYCKVVEVIAETTAPL 317 (446)
Q Consensus 288 vA~ai~~ll~~~~~~~~~v~ni~~~~~~t~ 317 (446)
+|+++++++.+.....|+++++.++.....
T Consensus 224 va~~v~~L~s~~~~itG~~i~vdGG~~~~~ 253 (270)
T 1yde_A 224 VGAAAVFLASEANFCTGIELLVTGGAELGY 253 (270)
T ss_dssp HHHHHHHHHHHCTTCCSCEEEESTTTTSCC
T ss_pred HHHHHHHHcccCCCcCCCEEEECCCeeccc
Confidence 999999999864445789999988865443
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.91 E-value=7.4e-24 Score=207.38 Aligned_cols=219 Identities=15% Similarity=0.126 Sum_probs=162.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.++++++|||||+|+||+++++.|+++|++|++++|+.+ ..+.+.+.++.. + .++.++.+|++|.
T Consensus 46 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~ 112 (294)
T 3r3s_A 46 RLKDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEEC---------G----RKAVLLPGDLSDE 112 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHT---------T----CCEEECCCCTTSH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHc---------C----CcEEEEEecCCCH
Confidence 457789999999999999999999999999999998733 344444433322 2 5789999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCC
Q 013273 155 VQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKF 218 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~ 218 (446)
+++++++ +++|+||||||.... +..+++..+++|+.++.++++++...- .++||++||..+...
T Consensus 113 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~~~ 192 (294)
T 3r3s_A 113 SFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAYQP 192 (294)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhccC
Confidence 8887776 479999999996421 223355678999999999999997653 249999999876443
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--cccceeecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
. .....|+.+|+..+.+.+ ..|+++++|+||+|+++..... ..............+.+.+++|+|
T Consensus 193 ~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 266 (294)
T 3r3s_A 193 S------PHLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTALQISGGQTQDKIPQFGQQTPMKRAGQPAELA 266 (294)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHTTTSCGGGSTTTTTTSTTSSCBCGGGGH
T ss_pred C------CCchHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCccccccccCCCHHHHHHHHhcCCCCCCcCHHHHH
Confidence 2 345679999999998865 2599999999999998741110 001111111223345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++++.+.. ...|++|+|.++..
T Consensus 267 ~~v~~L~s~~~~~itG~~i~vdGG~~ 292 (294)
T 3r3s_A 267 PVYVYLASQESSYVTAEVHGVCGGEH 292 (294)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHhCccccCCCCCEEEECCCcc
Confidence 99999997643 34689999988754
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.3e-24 Score=209.20 Aligned_cols=221 Identities=16% Similarity=0.153 Sum_probs=162.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... + ....++.++.+|++|.+++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~Dv~~~~~v 73 (280)
T 1xkq_A 4 FSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKS---------G-VSEKQVNSVVADVTTEDGQ 73 (280)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------T-CCGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---------C-CCCcceEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777766555431 1 0012789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCCc----------cCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEcccccc
Q 013273 158 EPALG-------NASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTN 216 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~~----------~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~ 216 (446)
+++++ ++|+||||||..... ..++...+++|+.++.++++++.. .+ ++||++||..+.
T Consensus 74 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~ 152 (280)
T 1xkq_A 74 DQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASK-GEIVNVSSIVAG 152 (280)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGS
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHhhcCC-CcEEEecCcccc
Confidence 87763 799999999964321 123455688999999999988864 35 799999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--c------cce-eecccCcccC
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--T------HNI-TLSQEDTLFG 280 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~------~~~-~~~~~~~~~~ 280 (446)
... ......|+.+|...+.+.+ ..|+++++|+||+++++...... . ... .........+
T Consensus 153 ~~~-----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 227 (280)
T 1xkq_A 153 PQA-----QPDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG 227 (280)
T ss_dssp SSC-----CCSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS
T ss_pred CCC-----CCcccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEeeCcCcCCcccccccccccccchHHHHHHHHcCCCCC
Confidence 322 0234679999999998765 36999999999999988421110 0 000 0001112234
Q ss_pred CccCHHHHHHHHHHHHhCC--CCCCCcEEEEecCCC
Q 013273 281 GQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT 314 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~--~~~~~~v~ni~~~~~ 314 (446)
.+.+++|+|+++++++.++ ....|++|++.++..
T Consensus 228 ~~~~pedvA~~v~~l~s~~~~~~~tG~~i~vdgG~~ 263 (280)
T 1xkq_A 228 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 263 (280)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCCCHHHHHHHHHHhcCcccccCccCCeEEECCCcc
Confidence 6789999999999999754 235688999987743
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.91 E-value=6.4e-24 Score=205.11 Aligned_cols=218 Identities=15% Similarity=0.107 Sum_probs=159.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...+++||||||+|+||+++++.|+++|++|++++|+. +..+.+.+.++.. + .++.++.+|++|.+
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~ 92 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEK---------G----YKAAVIKFDAASES 92 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CceEEEECCCCCHH
Confidence 35678999999999999999999999999999999954 4444554444332 2 57999999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCC
Q 013273 156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~ 218 (446)
+++++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||......
T Consensus 93 ~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (271)
T 4iin_A 93 DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKVMSKSRFGSVVNVASIIGERG 172 (271)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHHHhhcCCCEEEEEechhhcCC
Confidence 8887763 79999999996532 2233456688999999998888743 46679999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+.+++|+|++
T Consensus 173 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~ 246 (271)
T 4iin_A 173 ------NMGQTNYSASKGGMIAMSKSFAYEGALRNIRFNSVTPGFIETDMNANLKDELKADYVKNIPLNRLGSAKEVAEA 246 (271)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCC------------CGGGCTTCSCBCHHHHHHH
T ss_pred ------CCCchHhHHHHHHHHHHHHHHHHHHHHhCcEEEEEEeCcccCCchhhhcHHHHHHHHhcCCcCCCcCHHHHHHH
Confidence 2345679999999998765 278999999999999874321111111111112234567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...|+++++.++-
T Consensus 247 i~~l~s~~~~~itG~~i~vdGG~ 269 (271)
T 4iin_A 247 VAFLLSDHSSYITGETLKVNGGL 269 (271)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHHhCCCcCCCcCCEEEeCCCe
Confidence 999998653 3568999998764
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-25 Score=212.24 Aligned_cols=218 Identities=14% Similarity=0.096 Sum_probs=166.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.++
T Consensus 23 ~l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~ 89 (271)
T 4ibo_A 23 DLGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNV---------G----HDAEAVAFDVTSESE 89 (271)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---------T----CCEEECCCCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CceEEEEcCCCCHHH
Confidence 356789999999999999999999999999999999998888777766542 2 579999999999999
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||......
T Consensus 90 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iV~isS~~~~~~- 168 (271)
T 4ibo_A 90 IIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKRMIPRGYGKIVNIGSLTSELA- 168 (271)
T ss_dssp HHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEccHHhCCC-
Confidence 888774 79999999996432 2334556789999999999887754 46679999999776432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cc-eeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HN-ITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~-~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++....... .. ..........+.+.+++|+|+
T Consensus 169 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~ 243 (271)
T 4ibo_A 169 -----RATVAPYTVAKGGIKMLTRAMAAEWAQYGIQANAIGPGYMLTDMNQALIDNPEFDAWVKARTPAKRWGKPQELVG 243 (271)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHHCHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHHhhhCeEEEEEEeccEeCcchhhcccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 2345679999999998865 268999999999999874321100 00 000111223456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...|++++|.++.
T Consensus 244 ~v~~L~s~~~~~itG~~i~vdGG~ 267 (271)
T 4ibo_A 244 TAVFLSASASDYVNGQIIYVDGGM 267 (271)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhCccccCCCCcEEEECCCe
Confidence 9999997643 3568999998874
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.7e-24 Score=208.63 Aligned_cols=219 Identities=13% Similarity=0.120 Sum_probs=164.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++++|||||+|+||+++++.|+++|++|++++|+.++...+.+++... .+ .++.++.+|++|.++
T Consensus 24 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~----~~~~~~~~Dv~~~~~ 91 (277)
T 4fc7_A 24 LLRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGA--------TG----RRCLPLSMDVRAPPA 91 (277)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHH--------HS----SCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh--------cC----CcEEEEEcCCCCHHH
Confidence 467789999999999999999999999999999999988877766655432 12 579999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 92 v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~- 170 (277)
T 4fc7_A 92 VMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEKFFRDHGGVIVNITATLGNRG- 170 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCSHHHHT-
T ss_pred HHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhCCC-
Confidence 88776 479999999995422 233455678899999999999884 334569999999865332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--cc-cceeecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ET-HNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~~-~~~~~~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|+..+.+.+ ..|+++++|+||+++++..... .. ............+.+.+++|+|
T Consensus 171 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA 245 (277)
T 4fc7_A 171 -----QALQVHAGSAKAAVDAMTRHLAVEWGPQNIRVNSLAPGPISGTEGLRRLGGPQASLSTKVTASPLQRLGNKTEIA 245 (277)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBSSSHHHHHHSCCHHHHHHHHHTSTTSSCBCHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEECCEecchhhhhccCCHHHHHHHhccCCCCCCcCHHHHH
Confidence 1334679999999998765 2689999999999998732110 00 0000011123345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.+.. ...|++++|.++.
T Consensus 246 ~~v~fL~s~~~~~itG~~i~vdGG~ 270 (277)
T 4fc7_A 246 HSVLYLASPLASYVTGAVLVADGGA 270 (277)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHcCCccCCcCCCEEEECCCc
Confidence 99999998643 3568999988774
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.7e-24 Score=205.23 Aligned_cols=218 Identities=14% Similarity=0.112 Sum_probs=155.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++++||||||+|+||++++++|+++|++|++++|+.++.+.+.+++ + .++.++.+|++|.++
T Consensus 6 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~ 69 (261)
T 3n74_A 6 SLEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEI------------G----DAALAVAADISKEAD 69 (261)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTEEEEECCTTSHHH
T ss_pred cCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh------------C----CceEEEEecCCCHHH
Confidence 356789999999999999999999999999999999998877665532 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC----C----CCEEEEEcccc
Q 013273 157 IEPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K----VNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~----~----v~r~V~vSS~~ 214 (446)
++++++ ++|+||||||.... +..++...+++|+.++.++++++... + ..+||++||..
T Consensus 70 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~iv~isS~~ 149 (261)
T 3n74_A 70 VDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIPHFKENGAKGQECVILNVASTG 149 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTT
T ss_pred HHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEeCchh
Confidence 887764 78999999996431 22334556889999999998887432 1 45799999987
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc----ccceeecccCcccCCcc
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE----THNITLSQEDTLFGGQV 283 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~----~~~~~~~~~~~~~~~~v 283 (446)
.... ......|+.+|+..+.+.+ ..|+++++|+||++.++...... .............+.++
T Consensus 150 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (261)
T 3n74_A 150 AGRP------RPNLAWYNATKGWVVSVTKALAIELAPAKIRVVALNPVAGETPLLTTFMGEDSEEIRKKFRDSIPMGRLL 223 (261)
T ss_dssp TTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-------------------------CTTSSCC
T ss_pred hcCC------CCCccHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccChhhhhhcccCcHHHHHHHhhcCCcCCCc
Confidence 6432 1334579999999998865 26899999999999987422110 00000111122345689
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
+++|+|+++++++.+.. ...|++|++.++...+
T Consensus 224 ~~~dva~~~~~l~s~~~~~itG~~i~vdgG~~~~ 257 (261)
T 3n74_A 224 KPDDLAEAAAFLCSPQASMITGVALDVDGGRSIG 257 (261)
T ss_dssp CHHHHHHHHHHHTSGGGTTCCSCEEEESTTTTC-
T ss_pred CHHHHHHHHHHHcCCcccCcCCcEEEecCCcccC
Confidence 99999999999997543 3468999998887553
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=207.71 Aligned_cols=219 Identities=12% Similarity=0.114 Sum_probs=162.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHH-HHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAE-NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~-~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+++++||||||+|+||+++++.|+++|++|++++|+..... .+.+.++.. + .++.++.+|++|.+
T Consensus 44 ~l~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~d~~ 110 (291)
T 3ijr_A 44 KLKGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKE---------G----VKCVLLPGDLSDEQ 110 (291)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTT---------T----CCEEEEESCTTSHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---------C----CcEEEEECCCCCHH
Confidence 457789999999999999999999999999999999876433 333222221 1 57999999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~ 219 (446)
++++++ +++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.......
T Consensus 111 ~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~ 190 (291)
T 3ijr_A 111 HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVAYEGN 190 (291)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHHHHCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHhcCCC
Confidence 888776 478999999996421 23345667899999999999999875 34599999998663321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccCHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++..... ..............+.+.+++|+|++
T Consensus 191 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~ 264 (291)
T 3ijr_A 191 ------ETLIDYSATKGAIVAFTRSLSQSLVQKGIRVNGVAPGPIWTPLIPSSFDEKKVSQFGSNVPMQRPGQPYELAPA 264 (291)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTHHHHHSCHHHHHHTTTTSTTSSCBCGGGTHHH
T ss_pred ------CCChhHHHHHHHHHHHHHHHHHHHhhcCEEEEEEeeCCCcCCcccccCCHHHHHHHHccCCCCCCcCHHHHHHH
Confidence 334679999999998765 2599999999999998842110 00001111122334567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++.+.. ...|+++++.++..
T Consensus 265 v~~L~s~~~~~itG~~i~vdGG~~ 288 (291)
T 3ijr_A 265 YVYLASSDSSYVTGQMIHVNGGVI 288 (291)
T ss_dssp HHHHHSGGGTTCCSCEEEESSSCC
T ss_pred HHHHhCCccCCCcCCEEEECCCcc
Confidence 999997653 34689999988753
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.3e-24 Score=207.53 Aligned_cols=219 Identities=15% Similarity=0.112 Sum_probs=158.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||++++++|+++|++|++++|+.++...+.+.++.. + .++.++.+|++|.++
T Consensus 31 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~~ 97 (279)
T 3ctm_A 31 SLKGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTY---------G----VHSKAYKCNISDPKS 97 (279)
T ss_dssp CCTTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHH---------C----SCEEEEECCTTCHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcceEEEeecCCHHH
Confidence 356789999999999999999999999999999999987766665544432 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC-c-------cCCCCCcccchHHHH----HHHHHHHHhCCCCEEEEEccccccC
Q 013273 157 IEPALG-------NASVVICCIGASEK-E-------VFDITGPYRIDFQAT----KNLVDAATIAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~-~-------~~~~~~~~~vNv~g~----~~l~~aa~~~~v~r~V~vSS~~~~~ 217 (446)
++++++ .+|+||||||.... . ..++...+++|+.++ .++++.+++.+.++||++||..+..
T Consensus 98 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~isS~~~~~ 177 (279)
T 3ctm_A 98 VEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIGKIFKKNGKGSLIITSSISGKI 177 (279)
T ss_dssp HHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCCTTSC
T ss_pred HHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCeEEEECchHhcc
Confidence 888764 59999999996432 1 112344578899995 5566666667788999999987633
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.. ...+...|+.+|+..|.+++. .| ++++|+||++.++...................+.+++++|+|+
T Consensus 178 ~~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~-~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~ 252 (279)
T 3ctm_A 178 VN----IPQLQAPYNTAKAACTHLAKSLAIEWAPFA-RVNTISPGYIDTDITDFASKDMKAKWWQLTPLGREGLTQELVG 252 (279)
T ss_dssp C-------CCHHHHHHHHHHHHHHHHHHHHHTTTTC-EEEEEEECSBSSTTTSSCCHHHHHHHHHHSTTCSCBCGGGTHH
T ss_pred CC----CCCCcccHHHHHHHHHHHHHHHHHHhcccC-CEEEEeccCCccccccccChHHHHHHHHhCCccCCcCHHHHHH
Confidence 21 123456799999999988762 57 9999999999887432110000000001112345789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.++. ...|+++++.++.
T Consensus 253 ~~~~l~s~~~~~~tG~~i~vdgG~ 276 (279)
T 3ctm_A 253 GYLYLASNASTFTTGSDVVIDGGY 276 (279)
T ss_dssp HHHHHHSGGGTTCCSCEEEESTTC
T ss_pred HHHHHhCccccCccCCEEEECCCe
Confidence 9999997642 3468899998774
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.8e-24 Score=208.22 Aligned_cols=217 Identities=13% Similarity=0.062 Sum_probs=161.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+. ....+.+++... ..++.++.+|++|.++
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~-~~~~~~~~~~~~-------------~~~~~~~~~Dv~d~~~ 93 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTD-GVKEVADEIADG-------------GGSAEAVVADLADLEG 93 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESST-HHHHHHHHHHTT-------------TCEEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHH-HHHHHHHHHHhc-------------CCcEEEEEecCCCHHH
Confidence 35678999999999999999999999999999999764 344444443321 1579999999999988
Q ss_pred HHHHh------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++. +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 94 v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~~- 172 (273)
T 3uf0_A 94 AANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAMLAHGSGRIVTIASMLSFQGG- 172 (273)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchHhcCCC-
Confidence 87665 479999999996532 233455678999999999999873 4566799999998764332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-c-eeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++++........ . ..........+.+.+++|+|++
T Consensus 173 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~ 247 (273)
T 3uf0_A 173 -----RNVAAYAASKHAVVGLTRALASEWAGRGVGVNALAPGYVVTANTAALRADDERAAEITARIPAGRWATPEDMVGP 247 (273)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHHHSTTSSCBCGGGGHHH
T ss_pred -----CCChhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCchhhcccCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 345679999999998765 2799999999999998743211000 0 0000112234567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++.+.. ...|++++|.++.
T Consensus 248 v~~L~s~~a~~itG~~i~vdGG~ 270 (273)
T 3uf0_A 248 AVFLASDAASYVHGQVLAVDGGW 270 (273)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhcCCcCCEEEECcCc
Confidence 999998643 3568999998774
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.6e-24 Score=205.80 Aligned_cols=213 Identities=15% Similarity=0.149 Sum_probs=157.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 4 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~v 67 (253)
T 1hxh_A 4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL------------G----ERSMFVRHDVSSEADW 67 (253)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH------------C----TTEEEECCCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc------------C----CceEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999987766554432 1 5689999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++. +.+ ++||++||..+....
T Consensus 68 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~- 145 (253)
T 1hxh_A 68 TLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETG-GSIINMASVSSWLPI- 145 (253)
T ss_dssp HHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTC-EEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHHHHHcC-CEEEEEcchhhcCCC-
Confidence 7776 467999999996432 223345567899988887776653 456 899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh-------C--CCCEEEEecCCccCCCcccccccce--e-ecc--cCcccCCccCHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA-------S--GLPYTIVRPGGMERPTDAYKETHNI--T-LSQ--EDTLFGGQVSNL 286 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~-------~--gl~~tivRPg~v~gp~~~~~~~~~~--~-~~~--~~~~~~~~v~~~ 286 (446)
.....|+.+|...|.+.+. . |+++++||||+++++.......... . +.. .....+.+.+++
T Consensus 146 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 220 (253)
T 1hxh_A 146 -----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE 220 (253)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred -----CCCccHHHHHHHHHHHHHHHHHHhhhcCCCeEEEEEEeCCccCchhhhccchhhhHHHHhhhhccCccCCCCCHH
Confidence 3456799999999987652 3 9999999999999874221000000 0 100 012234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++++.++. ...|+++++.++.
T Consensus 221 dvA~~~~~l~s~~~~~~tG~~~~vdgG~ 248 (253)
T 1hxh_A 221 RIAQLVLFLASDESSVMSGSELHADNSI 248 (253)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSSC
T ss_pred HHHHHHHHHcCccccCCCCcEEEECCCc
Confidence 99999999998653 3468899887774
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=205.91 Aligned_cols=222 Identities=14% Similarity=0.135 Sum_probs=161.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||++++++|+++|++|++++|+.++...+.+++... .......++.++.+|++|.+++
T Consensus 16 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~~D~~~~~~v 87 (303)
T 1yxm_A 16 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQAN--------LPPTKQARVIPIQCNIRNEEEV 87 (303)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT--------SCTTCCCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--------ccccCCccEEEEecCCCCHHHH
Confidence 56789999999999999999999999999999999988877766655431 0001125799999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... ...++...+++|+.++.++++++.. .+.++||++||... .+.
T Consensus 88 ~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~--~~~ 165 (303)
T 1yxm_A 88 NNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTK--AGF 165 (303)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCT--TCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCeEEEEEeecc--cCC
Confidence 88774 69999999995321 1223455688999999999999765 24579999999872 221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCC--cccccc-ccee-ecccCcccCCccCHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPT--DAYKET-HNIT-LSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~--~~~~~~-~~~~-~~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...+.+.+ ..|+++++||||+++|+. ...... .... ........+.+++++|+|
T Consensus 166 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA 240 (303)
T 1yxm_A 166 -----PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEVS 240 (303)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHHH
T ss_pred -----CcchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCcccchhhhhccccchHHHHHHHhcCcccCCCCHHHHH
Confidence 234579999999887765 259999999999999983 221100 0000 000111234578999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++++.+.. ...|++|++.++..
T Consensus 241 ~~i~~l~~~~~~~~~G~~~~v~gG~~ 266 (303)
T 1yxm_A 241 SVVCFLLSPAASFITGQSVDVDGGRS 266 (303)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHhCcccccCCCcEEEECCCee
Confidence 99999997643 34688999988753
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-23 Score=201.22 Aligned_cols=210 Identities=16% Similarity=0.129 Sum_probs=151.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++ + .++.++.+|++|.++++++
T Consensus 1 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~~~~~v~~~ 64 (248)
T 3asu_A 1 MIVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDEL------------G----DNLYIAQLDVRNRAAIEEM 64 (248)
T ss_dssp CEEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------c----CceEEEEcCCCCHHHHHHH
Confidence 57999999999999999999999999999999987766554432 1 4689999999999999888
Q ss_pred hc-------CCCEEEEcccCCC--C-----ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 161 LG-------NASVVICCIGASE--K-----EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 ~~-------~~D~VI~~Ag~~~--~-----~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ ++|+||||||... . +..++...+++|+.++.++++++. +.+.++||++||......
T Consensus 65 ~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~---- 140 (248)
T 3asu_A 65 LASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMVERNHGHIINIGSTAGSWP---- 140 (248)
T ss_dssp HHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSC----
T ss_pred HHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCceEEEEccchhccC----
Confidence 74 6899999999642 1 223345668899999999988885 456689999999876432
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCcc-CCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~-gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|+..+.+.+ ..|+++++|+||++. ++.....................+++++|+|+++++
T Consensus 141 --~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~gT~~~~~~~~~~~~~~~~~~~~~~~~~p~dvA~~v~~ 218 (248)
T 3asu_A 141 --YAGGNVYGATKAFVRQFSLNLRTDLHGTAVRVTDIEPGLVGGTEFSNVRFKGDDGKAEKTYQNTVALTPEDVSEAVWW 218 (248)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECSBCC----------------------CCBCHHHHHHHHHH
T ss_pred --CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeccccccCcchhhcccCchHHHHHHHhccCCCCHHHHHHHHHH
Confidence 1335679999999998865 258999999999999 553211000000000000001135799999999999
Q ss_pred HHhCCCCCCCcEEEEecC
Q 013273 295 MAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~ 312 (446)
++.++....++.+++...
T Consensus 219 l~s~~~~~~g~~i~v~~~ 236 (248)
T 3asu_A 219 VSTLPAHVNINTLEMMPV 236 (248)
T ss_dssp HHHSCTTCCCCEEEECCT
T ss_pred HhcCCccceeeEEEEccc
Confidence 999876556777777554
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=201.00 Aligned_cols=208 Identities=18% Similarity=0.165 Sum_probs=152.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++++||||||+|+||+++++.|+++|++|++++|+.++. ..+.++.+|++|.++
T Consensus 18 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~------------------------~~~~~~~~Dl~d~~~ 73 (253)
T 2nm0_A 18 SHMSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPP------------------------EGFLAVKCDITDTEQ 73 (253)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------------TTSEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhh------------------------ccceEEEecCCCHHH
Confidence 35678999999999999999999999999999999986531 347889999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||......
T Consensus 74 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~- 152 (253)
T 2nm0_A 74 VEQAYKEIEETHGPVEVLIANAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLG- 152 (253)
T ss_dssp HHHHHHHHHHHTCSCSEEEEECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCC-
Confidence 88776 357999999996432 3345666788999999999987753 46679999999865331
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+++++|+|+++
T Consensus 153 -----~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~i 227 (253)
T 2nm0_A 153 -----SAGQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKVLTDEQRANIVSQVPLGRYARPEEIAATV 227 (253)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC---------CHHHHHTTCTTCSCBCHHHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 2345679999999988765 2689999999999987742111000000000112234578999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++++.++. ...|+++++.++..
T Consensus 228 ~~l~s~~~~~~tG~~i~vdGG~~ 250 (253)
T 2nm0_A 228 RFLASDDASYITGAVIPVDGGLG 250 (253)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTT
T ss_pred HHHhCccccCCcCcEEEECCccc
Confidence 99998653 34688999887753
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.4e-24 Score=204.59 Aligned_cols=207 Identities=19% Similarity=0.216 Sum_probs=150.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||+++++.|+++|++|++++|+.++...+.++++.. + ...++.++.+|++|.+++
T Consensus 30 l~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~--~~~~~~~~~~Dl~~~~~v 98 (279)
T 1xg5_A 30 WRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA---------G--YPGTLIPYRCDLSNEEDI 98 (279)
T ss_dssp GTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T--CSSEEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhc---------C--CCceEEEEEecCCCHHHH
Confidence 46789999999999999999999999999999999988777766655432 1 114688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHH----HHHHHHHHHhCCC--CEEEEEccccccCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQA----TKNLVDAATIAKV--NHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g----~~~l~~aa~~~~v--~r~V~vSS~~~~~~ 218 (446)
+++++ ++|+||||||.... ...++...+++|+.+ +.++++.+++.+. ++||++||..+...
T Consensus 99 ~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~~g~iv~isS~~~~~~ 178 (279)
T 1xg5_A 99 LSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHRV 178 (279)
T ss_dssp HHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTSC
T ss_pred HHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCceEEEEcChhhccc
Confidence 87764 79999999996432 122345568899999 5556666677765 79999999876421
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCccc-ccccceeecccCcccCCccCHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~-~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
. ...+...|+.+|..++.+.+ ..|+++++|+||++.++.... ......... .......+++++|+
T Consensus 179 ~----~~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~dv 253 (279)
T 1xg5_A 179 L----PLSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAA-ATYEQMKCLKPEDV 253 (279)
T ss_dssp C----SCGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHH-HHHC---CBCHHHH
T ss_pred C----CCCCCchhHHHHHHHHHHHHHHHHHHhhcCCCeEEEEEecCcccchhhhhhcccChhHHh-hhcccccCCCHHHH
Confidence 1 12445679999999887654 358999999999998874210 000000000 01112357899999
Q ss_pred HHHHHHHHhCCC
Q 013273 289 AELLACMAKNRS 300 (446)
Q Consensus 289 A~ai~~ll~~~~ 300 (446)
|+++++++.++.
T Consensus 254 A~~i~~l~~~~~ 265 (279)
T 1xg5_A 254 AEAVIYVLSTPA 265 (279)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHHhcCCc
Confidence 999999999875
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=2.9e-24 Score=206.41 Aligned_cols=217 Identities=11% Similarity=0.075 Sum_probs=157.7
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++++||||||+ |+||+++++.|+++|++|++++|+.+ .....+++... . +++.++.+|++|.+
T Consensus 6 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---------~----~~~~~~~~D~~~~~ 71 (261)
T 2wyu_A 6 LSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAER-LRPEAEKLAEA---------L----GGALLFRADVTQDE 71 (261)
T ss_dssp CTTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGG-GHHHHHHHHHH---------T----TCCEEEECCTTCHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHHHHHHh---------c----CCcEEEECCCCCHH
Confidence 456899999999 99999999999999999999999875 22222233221 1 34789999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
+++++++ ++|+||||||.... +..+++..+++|+.++.++++++.+. ..++||++||.+..
T Consensus 72 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 151 (261)
T 2wyu_A 72 ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYASE 151 (261)
T ss_dssp HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGGT
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence 8887764 78999999996431 22334566889999999999999765 12599999997664
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~D 287 (446)
... .....|+.+|...+.+.+ ..|+++++|+||+++++....... ... .........+.+.+++|
T Consensus 152 ~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~d 225 (261)
T 2wyu_A 152 KVV------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQEE 225 (261)
T ss_dssp SBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCTGGGGCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred CCC------CCchHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCCCcCchhhhccccHHHHHHHHhcCCCCCCCCHHH
Confidence 321 234579999999998775 259999999999999984321100 000 00001122345789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+++++++.+.. ...|++|++.++..
T Consensus 226 va~~v~~l~s~~~~~~tG~~~~vdgG~~ 253 (261)
T 2wyu_A 226 VGNLGLFLLSPLASGITGEVVYVDAGYH 253 (261)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHcChhhcCCCCCEEEECCCcc
Confidence 9999999997543 24588999988754
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=9.8e-24 Score=200.90 Aligned_cols=212 Identities=17% Similarity=0.090 Sum_probs=156.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++...+.+. -++.++.+|++|.+++
T Consensus 3 l~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~------------------~~~~~~~~D~~~~~~~ 64 (245)
T 1uls_A 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------------VGAHPVVMDVADPASV 64 (245)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------------TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH------------------cCCEEEEecCCCHHHH
Confidence 4568999999999999999999999999999999998766554321 1378899999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||.. .. +.
T Consensus 65 ~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~-~~-~~ 142 (245)
T 1uls_A 65 ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRV-YL-GN 142 (245)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGG-GG-CC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEccch-hc-CC
Confidence 8776 368999999996432 2233455688999999999888854 3667999999987 22 21
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++...................+.+++++|+|++++
T Consensus 143 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~v~ 217 (245)
T 1uls_A 143 -----LGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217 (245)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCcCcchhhcCHHHHHHHHhhCCCCCCcCHHHHHHHHH
Confidence 234579999999887765 36999999999999887421100000000001112345789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++.++. ...|+++++.++..
T Consensus 218 ~l~s~~~~~~tG~~~~vdgG~~ 239 (245)
T 1uls_A 218 FLLSDESSFITGQVLFVDGGRT 239 (245)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHhCchhcCCcCCEEEECCCcc
Confidence 9998643 34688998877743
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.91 E-value=2.5e-24 Score=205.81 Aligned_cols=219 Identities=16% Similarity=0.134 Sum_probs=159.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...+++||||||+|+||++++++|+++|++|++++ |+..+...+.+.++.. + .++.++.+|++|.+
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~ 76 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKAL---------G----FDFYASEGNVGDWD 76 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHT---------T----CCCEEEECCTTCHH
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CeeEEEecCCCCHH
Confidence 45678999999999999999999999999999988 6666666555554432 1 57899999999998
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCC
Q 013273 156 QIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~ 218 (446)
+++++++ ++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||......
T Consensus 77 ~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 156 (256)
T 3ezl_A 77 STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDGMVERGWGRIINISSVNGQKG 156 (256)
T ss_dssp HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCCCGGGS
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEcchhhccC
Confidence 8887763 78999999996532 22334556889999988887777 3456679999999876433
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
. .....|+.+|...+.+.+ ..|+++++|+||++.++...................+.+.+++|+|++
T Consensus 157 ~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~ 230 (256)
T 3ezl_A 157 Q------FGQTNYSTAKAGIHGFTMSLAQEVATKGVTVNTVSPGYIGTDMVKAIRPDVLEKIVATIPVRRLGSPDEIGSI 230 (256)
T ss_dssp C------SCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHHHSTTSSCBCHHHHHHH
T ss_pred C------CCCcccHHHHHHHHHHHHHHHHHHHHhCCEEEEEEECcccCccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 2 345679999999887765 268999999999998873211100000000111223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++.+.. ...|++|++.++..
T Consensus 231 ~~~l~s~~~~~~tG~~i~vdgG~~ 254 (256)
T 3ezl_A 231 VAWLASEESGFSTGADFSLNGGLH 254 (256)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTSC
T ss_pred HHHHhCCcccCCcCcEEEECCCEe
Confidence 999997542 35689999988753
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.1e-23 Score=201.90 Aligned_cols=217 Identities=17% Similarity=0.177 Sum_probs=162.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+. +..+.+.++++.. + .++.++.+|++|.++
T Consensus 29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~ 95 (271)
T 3v2g_A 29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQA---------G----GRAVAIRADNRDAEA 95 (271)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHH
Confidence 5678999999999999999999999999999997764 5555555555432 2 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~ 221 (446)
++++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||.......
T Consensus 96 v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~~~~~-- 173 (271)
T 3v2g_A 96 IEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLAELVP-- 173 (271)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGGTCCC--
T ss_pred HHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhhccCC--
Confidence 888764 89999999996432 23345666889999999999999765 45699999996543221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++....... ...........+.+.+++|+|+++++
T Consensus 174 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~-~~~~~~~~~~~~r~~~pedvA~~v~f 249 (271)
T 3v2g_A 174 ---WPGISLYSASKAALAGLTKGLARDLGPRGITVNIVHPGSTDTDMNPADGD-HAEAQRERIATGSYGEPQDIAGLVAW 249 (271)
T ss_dssp ---STTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSSSSCSSCS-SHHHHHHTCTTSSCBCHHHHHHHHHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEecCCCcCCcccccch-hHHHHHhcCCCCCCCCHHHHHHHHHH
Confidence 1345679999999998865 269999999999999875321110 00001112234567899999999999
Q ss_pred HHhCCC-CCCCcEEEEecCC
Q 013273 295 MAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.+.. ...|++++|.++.
T Consensus 250 L~s~~~~~itG~~i~vdGG~ 269 (271)
T 3v2g_A 250 LAGPQGKFVTGASLTIDGGA 269 (271)
T ss_dssp HHSGGGTTCCSCEEEESTTT
T ss_pred HhCcccCCccCCEEEeCcCc
Confidence 997543 3568999997764
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-24 Score=207.01 Aligned_cols=212 Identities=16% Similarity=0.108 Sum_probs=156.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+. ...++.++.+|++|.+++
T Consensus 4 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~------------------~~~~~~~~~~D~~~~~~~ 65 (246)
T 2ag5_A 4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE------------------KYPGIQTRVLDVTKKKQI 65 (246)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG------------------GSTTEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH------------------hccCceEEEeeCCCHHHH
Confidence 45689999999999999999999999999999999876543321 013689999999999988
Q ss_pred HHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhh
Q 013273 158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||........
T Consensus 66 ~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---- 141 (246)
T 2ag5_A 66 DQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKGV---- 141 (246)
T ss_dssp HHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBCC----
T ss_pred HHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEEechHhCcCCC----
Confidence 8664 679999999996432 223345567899999999998875 34678999999986643221
Q ss_pred hchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccc-----cc-eeecccCcccCCccCHHHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKET-----HN-ITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~-----~~-~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|+..|.+++. .|+++++||||+++++....... .. ..........+.+++++|+|++
T Consensus 142 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~ 220 (246)
T 2ag5_A 142 -VNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAML 220 (246)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHHH
T ss_pred -CCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCcCcCcchhhhhhcccCcHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 1456799999999988762 59999999999999874211000 00 0000011223457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.++. ...|+++++.++
T Consensus 221 v~~l~s~~~~~~tG~~i~vdgG 242 (246)
T 2ag5_A 221 CVYLASDESAYVTGNPVIIDGG 242 (246)
T ss_dssp HHHHHSGGGTTCCSCEEEECTT
T ss_pred HHHHhCccccCCCCCEEEECCC
Confidence 999997643 346889988776
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=199.36 Aligned_cols=202 Identities=16% Similarity=0.181 Sum_probs=150.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~~~~~~ 71 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAA---------G----AKVHVLELDVADRQGV 71 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999988877766655432 1 5789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..++...+++|+.++.++++++.. .+ ++||++||.......
T Consensus 72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~-g~iv~isS~~~~~~~- 149 (247)
T 2jah_A 72 DAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPHLLRSK-GTVVQMSSIAGRVNV- 149 (247)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGGTCCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCC-CEEEEEccHHhcCCC-
Confidence 8776 479999999996432 2223455688999999999988853 45 799999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCC--ccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGG--QVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~--~v~~~DvA~a 291 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++........... .......+. +++++|+|++
T Consensus 150 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~~~pedvA~~ 223 (247)
T 2jah_A 150 -----RNAAVYQATKFGVNAFSETLRQEVTERGVRVVVIEPGTTDTELRGHITHTATK-EMYEQRISQIRKLQAQDIAEA 223 (247)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCCCHHHH-HHHHHHTTTSCCBCHHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCCCCCcchhcccchhhH-HHHHhcccccCCCCHHHHHHH
Confidence 334579999999887765 3699999999999998742111000000 000000022 4899999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
+++++.++.
T Consensus 224 v~~l~s~~~ 232 (247)
T 2jah_A 224 VRYAVTAPH 232 (247)
T ss_dssp HHHHHHSCT
T ss_pred HHHHhCCCc
Confidence 999998765
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.91 E-value=9.5e-24 Score=202.73 Aligned_cols=221 Identities=14% Similarity=0.064 Sum_probs=156.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.++++|||||+|+||+++++.|+++|++|+++ .|+.+......++++.. + .++.++.+|++|.+
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~ 71 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKL---------G----RSALAIKADLTNAA 71 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTT---------T----SCCEEEECCTTCHH
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CceEEEEcCCCCHH
Confidence 3567899999999999999999999999999998 45556555555554432 2 57899999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCC-C------CccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCCC
Q 013273 156 QIEPALG-------NASVVICCIGAS-E------KEVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~-~------~~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~~ 219 (446)
+++++++ ++|+||||||.. . .+..+++..+++|+.++.++++++...- .++||++||......+
T Consensus 72 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 151 (259)
T 3edm_A 72 EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQAGRDGG 151 (259)
T ss_dssp HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCHHhccCC
Confidence 8888763 789999999854 1 1222345568999999999999997652 2489999997664111
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+. .++++++|+||++.++...... .............+.+.+++|+|+++
T Consensus 152 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~I~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedva~~v 226 (259)
T 3edm_A 152 -----GPGALAYATSKGAVMTFTRGLAKEVGPKIRVNAVCPGMISTTFHDTFTKPEVRERVAGATSLKREGSSEDVAGLV 226 (259)
T ss_dssp -----STTCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCC----------------------CCBCHHHHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCcCcccccccChHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 13456799999999988752 3499999999999987432111 11111111122345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
++++.+.. ...|++|++.++...
T Consensus 227 ~~L~s~~~~~itG~~i~vdGg~~~ 250 (259)
T 3edm_A 227 AFLASDDAAYVTGACYDINGGVLF 250 (259)
T ss_dssp HHHHSGGGTTCCSCEEEESBCSSB
T ss_pred HHHcCccccCccCCEEEECCCcCC
Confidence 99997653 346899999887543
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=198.89 Aligned_cols=205 Identities=12% Similarity=0.100 Sum_probs=155.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
+++||||||+|+||+++++.|+++|+ +|++++|+.++...+.++++.. + .++.++.+|++
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~ 68 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---------G----ALTDTITADIS 68 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---------T----CEEEEEECCTT
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHcc---------C----CeeeEEEecCC
Confidence 46899999999999999999999999 9999999988777665554321 1 57899999999
Q ss_pred ChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccc
Q 013273 153 KRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT 215 (446)
Q Consensus 153 d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~ 215 (446)
|.++++++++ ++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||..+
T Consensus 69 ~~~~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~iv~isS~~~ 148 (244)
T 2bd0_A 69 DMADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAA 148 (244)
T ss_dssp SHHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCEEEEEecchh
Confidence 9998888774 79999999996432 223345568899999999998884 346789999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
... ..+...|+.+|...|.+++ ..|+++++||||+++++....... .. ...+++++|+
T Consensus 149 ~~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~-------~~--~~~~~~~~dv 213 (244)
T 2bd0_A 149 TKA------FRHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGKVDD-------EM--QALMMMPEDI 213 (244)
T ss_dssp TSC------CTTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCCCCS-------TT--GGGSBCHHHH
T ss_pred cCC------CCCCchhHHHHHHHHHHHHHHHHHhhccCcEEEEEECCCccchhhhhccc-------cc--cccCCCHHHH
Confidence 432 1345679999999998764 368999999999999985321100 00 1257999999
Q ss_pred HHHHHHHHhCCCC-CCCcEEEEecC
Q 013273 289 AELLACMAKNRSL-SYCKVVEVIAE 312 (446)
Q Consensus 289 A~ai~~ll~~~~~-~~~~v~ni~~~ 312 (446)
|+++++++.++.. ..++++...++
T Consensus 214 a~~~~~l~~~~~~~~~g~~~~~~~~ 238 (244)
T 2bd0_A 214 AAPVVQAYLQPSRTVVEEIILRPTS 238 (244)
T ss_dssp HHHHHHHHTSCTTEEEEEEEEEETT
T ss_pred HHHHHHHHhCCccccchheEEeccc
Confidence 9999999987652 23444444443
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=7e-24 Score=204.24 Aligned_cols=214 Identities=14% Similarity=0.085 Sum_probs=159.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++ + .++.++.+|++|.+++
T Consensus 4 l~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~D~~~~~~v 67 (263)
T 2a4k_A 4 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAAL------------E----AEAIAVVADVSDPKAV 67 (263)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTC------------C----SSEEEEECCTTSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh------------c----CceEEEEcCCCCHHHH
Confidence 45689999999999999999999999999999999987766543311 1 4689999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~~~~~ 222 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++...- .++||++||..+. +
T Consensus 68 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~--~--- 142 (263)
T 2a4k_A 68 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGL--G--- 142 (263)
T ss_dssp HHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTC--C---
T ss_pred HHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEecchhc--C---
Confidence 8776 368999999996432 122345568899999999999997642 4699999998764 2
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
......|+.+|...+.+.+ ..|+++++|+||+++++...................+.+++++|+|++++++
T Consensus 143 --~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~p~dvA~~v~~l 220 (263)
T 2a4k_A 143 --AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL 220 (263)
T ss_dssp --HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred --CCCcHHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEEeCcCcCchhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 2345679999998887765 3699999999999998742211000000000112234578999999999999
Q ss_pred HhCCC-CCCCcEEEEecCCC
Q 013273 296 AKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~~ 314 (446)
+.++. ...|+++++.++..
T Consensus 221 ~s~~~~~~tG~~i~vdgG~~ 240 (263)
T 2a4k_A 221 LSEESAYITGQALYVDGGRS 240 (263)
T ss_dssp HSGGGTTCCSCEEEESTTTT
T ss_pred hCccccCCcCCEEEECCCcc
Confidence 97643 34688999887753
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=201.47 Aligned_cols=221 Identities=16% Similarity=0.134 Sum_probs=165.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... ....++.++.+|++|.++
T Consensus 5 ~l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~~~ 73 (265)
T 3lf2_A 5 DLSEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQR-----------FPGARLFASVCDVLDALQ 73 (265)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH-----------STTCCEEEEECCTTCHHH
T ss_pred CcCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHh-----------cCCceEEEEeCCCCCHHH
Confidence 356789999999999999999999999999999999998888777766542 011358999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 74 v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 153 (265)
T 3lf2_A 74 VRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQLESRADAAIVCVNSLLASQPE 153 (265)
T ss_dssp HHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEEGGGTSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEECCcccCCCC
Confidence 87776 478999999996432 2233456688999999999999853 455699999998764332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-c-----c---e---eecccCcccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-H-----N---I---TLSQEDTLFG 280 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~-----~---~---~~~~~~~~~~ 280 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++....... . . + .........+
T Consensus 154 ------~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 227 (265)
T 3lf2_A 154 ------PHMVATSAARAGVKNLVRSMAFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARNKQIPLG 227 (265)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHHTTCTTC
T ss_pred ------CCchhhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhccCCCcC
Confidence 345679999999998765 268999999999998863211000 0 0 0 0000013345
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
.+.+++|+|+++++++.+.. ...|+++++.++..
T Consensus 228 r~~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~ 262 (265)
T 3lf2_A 228 RLGKPIEAARAILFLASPLSAYTTGSHIDVSGGLS 262 (265)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSEEEEESSSCC
T ss_pred CCcCHHHHHHHHHHHhCchhcCcCCCEEEECCCCc
Confidence 67899999999999997643 35688999887753
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-23 Score=204.19 Aligned_cols=218 Identities=16% Similarity=0.134 Sum_probs=160.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++++|||||+|+||+++++.|+++|++|++++|+... .+.+.+.++.. + .++.++.+|++|.++
T Consensus 27 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 93 (283)
T 1g0o_A 27 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---------G----SDAACVKANVGVVED 93 (283)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHh---------C----CCeEEEEcCCCCHHH
Confidence 567899999999999999999999999999999998754 34444444321 1 578999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ +++|+||||||.... +..+++..+++|+.++.++++++.+. +.++||++||........
T Consensus 94 ~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~~~- 172 (283)
T 1g0o_A 94 IVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKAV- 172 (283)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSSC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhhccCCC-
Confidence 87765 479999999996532 22345566899999999999999875 667999999976633211
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc---------cce-eeccc--CcccCC
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET---------HNI-TLSQE--DTLFGG 281 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~---------~~~-~~~~~--~~~~~~ 281 (446)
.....|+.+|+..+.+.+ ..|+++++|+||+++++..... .. ... ..... ....+.
T Consensus 173 ----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 248 (283)
T 1g0o_A 173 ----PKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPLRR 248 (283)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTTCS
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhcCCCCCC
Confidence 125679999999998775 3699999999999998732110 00 000 00000 123345
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+++|+|+++++++.+.. ...|+++++.++.
T Consensus 249 ~~~p~dvA~~v~~l~s~~~~~itG~~i~vdgG~ 281 (283)
T 1g0o_A 249 VGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 281 (283)
T ss_dssp CBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CcCHHHHHHHHHHHhCccccCcCCCEEEeCCCc
Confidence 7899999999999998643 3468899887763
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.6e-23 Score=202.85 Aligned_cols=211 Identities=12% Similarity=0.080 Sum_probs=148.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++. .++.++.+|++|.+++
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~d~~~v 89 (272)
T 4dyv_A 26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIG----------------DDALCVPTDVTDPDSV 89 (272)
T ss_dssp --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHT----------------SCCEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------------CCeEEEEecCCCHHHH
Confidence 456899999999999999999999999999999999887776654331 5789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CC--CCEEEEEccccccC
Q 013273 158 EPALG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v~r~V~vSS~~~~~ 217 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++||++||.....
T Consensus 90 ~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 169 (272)
T 4dyv_A 90 RALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFRVMKAQEPRGGRIINNGSISATS 169 (272)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCSSTTS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCCcEEEEECchhhcC
Confidence 88774 89999999996422 2233456689999999998888753 33 46999999987643
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.. .....|+.+|..++.+.+ ..|+++++|+||++.++........ ..........+.+++++|+|+
T Consensus 170 ~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~pedvA~ 242 (272)
T 4dyv_A 170 PR------PYSAPYTATKHAITGLTKSTSLDGRVHDIACGQIDIGNADTPMAQKMKAG-VPQADLSIKVEPVMDVAHVAS 242 (272)
T ss_dssp CC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEEECC-------------------------CHHHHHH
T ss_pred CC------CCchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEECcccChhhhhhccc-chhhhhcccccCCCCHHHHHH
Confidence 22 345679999999998865 2689999999999998742211110 000011122345789999999
Q ss_pred HHHHHHhCCCCCCCcEEEEec
Q 013273 291 LLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~ 311 (446)
++++++.++......-+.+..
T Consensus 243 ~v~fL~s~~~~~~~~~i~i~~ 263 (272)
T 4dyv_A 243 AVVYMASLPLDANVQFMTIMA 263 (272)
T ss_dssp HHHHHHHSCTTSCCCEEEEEE
T ss_pred HHHHHhCCCCcCccceEEEec
Confidence 999999987644444444433
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.91 E-value=4.7e-23 Score=198.05 Aligned_cols=197 Identities=21% Similarity=0.228 Sum_probs=148.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... + .++.++.+|++|.++
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~ 92 (262)
T 3rkr_A 26 SLSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAA---------G----GEAESHACDLSHSDA 92 (262)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CEEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---------C----CceeEEEecCCCHHH
Confidence 356789999999999999999999999999999999998888777666542 2 579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +.+|+||||||... .+..++...+++|+.++.++++++. +.+.++||++||..+...
T Consensus 93 v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~ 172 (262)
T 3rkr_A 93 IAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAPAMIAAKRGHIINISSLAGKNP 172 (262)
T ss_dssp HHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCEEEEECSSCSSCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCceEEEEechhhcCC
Confidence 88776 46899999999621 1223345568899999999998874 356789999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|+..+.+++ ..|+++++|+||++.++...... .......+++++|+|++
T Consensus 173 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~--------~~~~~~~~~~p~dvA~~ 238 (262)
T 3rkr_A 173 ------VADGAAYTASKWGLNGLMTSAAEELRQHQVRVSLVAPGSVRTEFGVGLS--------AKKSALGAIEPDDIADV 238 (262)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC------------------------CCCHHHHHHH
T ss_pred ------CCCCchHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCCCcCCcccccc--------cccccccCCCHHHHHHH
Confidence 2345679999999988765 36999999999999876321100 11123456899999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
+++++.+..
T Consensus 239 v~~l~s~~~ 247 (262)
T 3rkr_A 239 VALLATQAD 247 (262)
T ss_dssp HHHHHTCCT
T ss_pred HHHHhcCcc
Confidence 999998765
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.91 E-value=2e-23 Score=201.34 Aligned_cols=205 Identities=16% Similarity=0.169 Sum_probs=149.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|++++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.++
T Consensus 1 Ml~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~ 67 (264)
T 3tfo_A 1 MVMDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDA---------G----GTALAQVLDVTDRHS 67 (264)
T ss_dssp CCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHT---------T----CEEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHHH
Confidence 356789999999999999999999999999999999998888877766543 2 578999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..++...+++|+.|+.++++++. +.+.++||++||......
T Consensus 68 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~~~- 146 (264)
T 3tfo_A 68 VAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPIMEAQRSGQIINIGSIGALSV- 146 (264)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCC-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCeEEEEEcCHHHccc-
Confidence 88776 479999999996532 223455668899999999888874 346679999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH----h-CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI----A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~----~-~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|...+.+.+ + .|+++++|+||++.++.......... ..........+++++|+|+++++
T Consensus 147 -----~~~~~~Y~asKaal~~l~~~la~e~~gIrvn~v~PG~v~T~~~~~~~~~~~-~~~~~~~~~~~~~pedvA~~v~~ 220 (264)
T 3tfo_A 147 -----VPTAAVYCATKFAVRAISDGLRQESTNIRVTCVNPGVVESELAGTITHEET-MAAMDTYRAIALQPADIARAVRQ 220 (264)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHCSSEEEEEEEECCC------------------------CCCHHHHHHHHHH
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHhCCCCEEEEEecCCCcCcccccccchhH-HHHHHhhhccCCCHHHHHHHHHH
Confidence 1344679999999988765 2 48999999999998874221110000 00001111225799999999999
Q ss_pred HHhCCCC
Q 013273 295 MAKNRSL 301 (446)
Q Consensus 295 ll~~~~~ 301 (446)
++.++..
T Consensus 221 l~s~~~~ 227 (264)
T 3tfo_A 221 VIEAPQS 227 (264)
T ss_dssp HHHSCTT
T ss_pred HhcCCcc
Confidence 9998763
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.91 E-value=6e-24 Score=205.13 Aligned_cols=198 Identities=15% Similarity=0.132 Sum_probs=149.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++||||||+|+||+++++.|+++|++|++++|+.++.+.+ ...++.++.+|++|.+++
T Consensus 14 ~~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-------------------~~~~~~~~~~Dv~d~~~v 74 (266)
T 3p19_A 14 SMKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKAL-------------------NLPNTLCAQVDVTDKYTF 74 (266)
T ss_dssp -CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTT-------------------CCTTEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHh-------------------hcCCceEEEecCCCHHHH
Confidence 4568999999999999999999999999999999997654432 114789999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..+++..+++|+.|+.++++++. +.+.++||++||..+....
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~IV~isS~~~~~~~- 153 (266)
T 3p19_A 75 DTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAPMKARNCGTIINISSIAGKKTF- 153 (266)
T ss_dssp HHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcChhhCCCC-
Confidence 87764 78999999996532 223344568899999999877774 4577899999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee--ecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~--~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++........... ........+.+++++|||++
T Consensus 154 -----~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~a 228 (266)
T 3p19_A 154 -----PDHAAYCGTKFAVHAISENVREEVAASNVRVMTIAPSAVKTELLSHTTSQQIKDGYDAWRVDMGGVLAADDVARA 228 (266)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBSSSGGGGCSCHHHHHHHHHHHHHTTCCBCHHHHHHH
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeeCccccchhhcccchhhhHHHHhhcccccCCCCHHHHHHH
Confidence 345679999999997765 3699999999999998743211100000 00001134568999999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
+++++.++.
T Consensus 229 v~~l~~~~~ 237 (266)
T 3p19_A 229 VLFAYQQPQ 237 (266)
T ss_dssp HHHHHHSCT
T ss_pred HHHHHcCCC
Confidence 999999876
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=202.44 Aligned_cols=219 Identities=15% Similarity=0.166 Sum_probs=161.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.++++|||||+|+||++++++|+++|++|++++|+. ...+.+.++++.. + .++.++.+|++|.+
T Consensus 15 ~l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~ 81 (270)
T 3is3_A 15 RLDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKAL---------G----SDAIAIKADIRQVP 81 (270)
T ss_dssp CCTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHH
T ss_pred CcCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CcEEEEEcCCCCHH
Confidence 35678999999999999999999999999999987754 4555555555432 2 67999999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~~~ 220 (446)
++++++ +++|+||||||.... +..+++..+++|+.++.++++++...- .++||++||......+
T Consensus 82 ~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 160 (270)
T 3is3_A 82 EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNTSKDFS- 160 (270)
T ss_dssp HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTTTTTCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCchhccCC-
Confidence 888776 478999999996532 233456678999999999999997653 3499999997642222
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc------ce------eecccCcccCC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH------NI------TLSQEDTLFGG 281 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~------~~------~~~~~~~~~~~ 281 (446)
......|+.+|+..+.+.+ ..|+++++|+||++.++........ .. .........+.
T Consensus 161 ----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r 236 (270)
T 3is3_A 161 ----VPKHSLYSGSKGAVDSFVRIFSKDCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHASPLHR 236 (270)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHHSTTCS
T ss_pred ----CCCCchhHHHHHHHHHHHHHHHHHhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhcCCCCC
Confidence 1345679999999998865 2699999999999998853210000 00 00011123456
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+++|+|+++++++.+.. ...|++++|.++.
T Consensus 237 ~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG~ 269 (270)
T 3is3_A 237 NGWPQDVANVVGFLVSKEGEWVNGKVLTLDGGA 269 (270)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred CCCHHHHHHHHHHHcCCccCCccCcEEEeCCCC
Confidence 7889999999999997543 3468999987763
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.9e-23 Score=202.38 Aligned_cols=212 Identities=13% Similarity=0.077 Sum_probs=152.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
+++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.. ..++.++.+|++|.++++++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~d~~~v~~~ 87 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSA--------------KTRVLPLTLDVRDRAAMSAA 87 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTT--------------TSCEEEEECCTTCHHHHHHH
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhc--------------CCcEEEEEcCCCCHHHHHHH
Confidence 7999999999999999999999999999999998877666544321 04789999999999999888
Q ss_pred hc-------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCC-EEEEEccccccCCCCc
Q 013273 161 LG-------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVN-HFIMVSSLGTNKFGFP 221 (446)
Q Consensus 161 ~~-------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~-r~V~vSS~~~~~~~~~ 221 (446)
++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.+ +||++||......
T Consensus 88 ~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~~~g~~IV~isS~~~~~~--- 164 (272)
T 2nwq_A 88 VDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPRLIAHGAGASIVNLGSVAGKWP--- 164 (272)
T ss_dssp HHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCTTCEEEEECCGGGTSC---
T ss_pred HHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeCCchhccC---
Confidence 74 46999999996431 123345568899999888877774 45667 9999999876432
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|...+.+.+. .|+++++|+||++.++.....................+++++|+|+++++
T Consensus 165 ---~~~~~~Y~asKaa~~~l~~~la~el~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~pedvA~~v~~ 241 (272)
T 2nwq_A 165 ---YPGSHVYGGTKAFVEQFSLNLRCDLQGTGVRVTNLEPGLCESEFSLVRFGGDQARYDKTYAGAHPIQPEDIAETIFW 241 (272)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEECSBC--------------------CCCCBCHHHHHHHHHH
T ss_pred ---CCCCchHHHHHHHHHHHHHHHHHHhCccCeEEEEEEcCCCcCcchhcccccchHHHHHhhccCCCCCHHHHHHHHHH
Confidence 12346799999999988762 68999999999999874211000000000000001135899999999999
Q ss_pred HHhCCCCCCCcEEEEecC
Q 013273 295 MAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~ 312 (446)
++.++....++.+.+.++
T Consensus 242 l~s~~~~~~g~~i~v~~~ 259 (272)
T 2nwq_A 242 IMNQPAHLNINSLEIMPV 259 (272)
T ss_dssp HHTSCTTEEEEEEEEEET
T ss_pred HhCCCccCccceEEEeec
Confidence 998766456677777654
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-23 Score=202.79 Aligned_cols=222 Identities=13% Similarity=0.133 Sum_probs=165.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||++++++|+++|++|++++|+.++...+.+++... + ....+.++.+|++|.+++
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~--~~~~~~~~~~D~~~~~~~ 76 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQ---------Y--PDAILQPVVADLGTEQGC 76 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH---------C--TTCEEEEEECCTTSHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------C--CCceEEEEecCCCCHHHH
Confidence 46789999999999999999999999999999999998888777666543 1 125688999999999988
Q ss_pred HHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhh
Q 013273 158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 77 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 151 (267)
T 3t4x_A 77 QDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIERKEGRVIFIASEAAIMPS----- 151 (267)
T ss_dssp HHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTEEEEEEECCGGGTSCC-----
T ss_pred HHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEEcchhhccCC-----
Confidence 8776 478999999996432 223345568899999888877764 4566799999998764322
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----ccccee--------e--cccCcccCCc
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNIT--------L--SQEDTLFGGQ 282 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~~~~~~--------~--~~~~~~~~~~ 282 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++..... ...... + .......+.+
T Consensus 152 -~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~ 230 (267)
T 3t4x_A 152 -QEMAHYSATKTMQLSLSRSLAELTTGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENRPTSIIQRL 230 (267)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHCTTCSSCSC
T ss_pred -CcchHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccCCcccccCc
Confidence 345679999999998876 2589999999999988631110 000000 0 0011224578
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
.+++|+|+++++++.+.. ...|++++|.++...+
T Consensus 231 ~~pedvA~~v~fL~s~~~~~itG~~i~vdGG~~~s 265 (267)
T 3t4x_A 231 IRPEEIAHLVTFLSSPLSSAINGSALRIDGGLVRS 265 (267)
T ss_dssp BCTHHHHHHHHHHHSGGGTTCCSCEEEESTTCSCS
T ss_pred cCHHHHHHHHHHHcCccccCccCCeEEECCCcccc
Confidence 999999999999998643 3568999998876543
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.91 E-value=3.2e-23 Score=203.27 Aligned_cols=217 Identities=14% Similarity=0.137 Sum_probs=160.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC------------chhHHHHHHHHHHhhhcccccccCCCCCCceE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEMLE 145 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~------------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~ 145 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+ .++...+.++++.. + .++.
T Consensus 26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~ 92 (299)
T 3t7c_A 26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEAL---------G----RRII 92 (299)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHT---------T----CCEE
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhc---------C----CceE
Confidence 567899999999999999999999999999999987 44445544444332 2 6799
Q ss_pred EEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC-----CCCE
Q 013273 146 LVECDLEKRVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA-----KVNH 206 (446)
Q Consensus 146 ~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r 206 (446)
++.+|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++... +.++
T Consensus 93 ~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~ 172 (299)
T 3t7c_A 93 ASQVDVRDFDAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIPHIMAGKRGGS 172 (299)
T ss_dssp EEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTSCEE
T ss_pred EEECCCCCHHHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcE
Confidence 9999999999888776 479999999996432 22334567899999999999987532 3569
Q ss_pred EEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----c---cee
Q 013273 207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----H---NIT 271 (446)
Q Consensus 207 ~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~---~~~ 271 (446)
||++||....... .....|+.+|..++.+.+ ..|+++++|+||++.++....... . ...
T Consensus 173 Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 246 (299)
T 3t7c_A 173 IVFTSSIGGLRGA------ENIGNYIASKHGLHGLMRTMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPT 246 (299)
T ss_dssp EEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCC
T ss_pred EEEECChhhccCC------CCcchHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccch
Confidence 9999998764321 345679999999998765 258999999999999885321000 0 000
Q ss_pred e-------cccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 272 L-------SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 272 ~-------~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
. .......+.+.+++|||+++++++.+.. ...|++++|.++.
T Consensus 247 ~~~~~~~~~~~~~~p~r~~~pedvA~~v~fL~s~~a~~itG~~i~vdGG~ 296 (299)
T 3t7c_A 247 VEDFQVASRQMHVLPIPYVEPADISNAILFLVSDDARYITGVSLPVDGGA 296 (299)
T ss_dssp HHHHHHHHHHHSSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred hhHHHHHhhhhcccCcCCCCHHHHHHHHHHHhCcccccCcCCEEeeCCCc
Confidence 0 0011122567899999999999997653 3568999998774
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.5e-23 Score=192.63 Aligned_cols=196 Identities=18% Similarity=0.189 Sum_probs=151.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+++... .+ .++.++.+|++|.+++++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------~~----~~~~~~~~D~~~~~~v~~ 69 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQE--------QG----VEVFYHHLDVSKAESVEE 69 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HC----CCEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh--------cC----CeEEEEEeccCCHHHHHH
Confidence 578999999999999999999999999999999998888776665422 12 579999999999999888
Q ss_pred Hhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchh
Q 013273 160 ALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 160 a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++ ++|+||||||.... +..++...+++|+.++.++++++... +.+++|++||.......
T Consensus 70 ~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~ii~~sS~~~~~~~---- 145 (235)
T 3l77_A 70 FSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDSLKRTGGLALVTTSDVSARLI---- 145 (235)
T ss_dssp HCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGSSCC----
T ss_pred HHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCcEEEEecchhcccC----
Confidence 874 78999999996432 22334566889999999999998542 34578888886553321
Q ss_pred hhchhhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 224 ILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.....|+.+|+..+.+.+. .|+++++|+||++.++....... ......+++++|+|+++++++.+
T Consensus 146 --~~~~~Y~~sKaa~~~~~~~l~~~~~~i~v~~v~PG~v~T~~~~~~~~--------~~~~~~~~~p~dva~~v~~l~~~ 215 (235)
T 3l77_A 146 --PYGGGYVSTKWAARALVRTFQIENPDVRFFELRPGAVDTYFGGSKPG--------KPKEKGYLKPDEIAEAVRCLLKL 215 (235)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEECSBSSSTTTCCSC--------CCGGGTCBCHHHHHHHHHHHHTS
T ss_pred --CCcchHHHHHHHHHHHHHHHhhcCCCeEEEEEeCCccccccccccCC--------cccccCCCCHHHHHHHHHHHHcC
Confidence 2345799999999988763 69999999999998764211100 11122578999999999999998
Q ss_pred CCC
Q 013273 299 RSL 301 (446)
Q Consensus 299 ~~~ 301 (446)
+..
T Consensus 216 ~~~ 218 (235)
T 3l77_A 216 PKD 218 (235)
T ss_dssp CTT
T ss_pred CCC
Confidence 763
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.3e-23 Score=200.73 Aligned_cols=217 Identities=16% Similarity=0.111 Sum_probs=160.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC----------------chhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------------VQRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~----------------~~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+ .++...+.+.++.. .
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 75 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGH-------------N 75 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTT-------------T
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhc-------------C
Confidence 567899999999999999999999999999999987 34444444433321 2
Q ss_pred CceEEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC----C
Q 013273 142 EMLELVECDLEKRVQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA----K 203 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~----~ 203 (446)
.++.++.+|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++... +
T Consensus 76 ~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~ 155 (286)
T 3uve_A 76 RRIVTAEVDVRDYDALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVPHMIAGG 155 (286)
T ss_dssp CCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEEcCCCCHHHHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCC
Confidence 67999999999999888776 479999999996432 22345567899999999999988542 2
Q ss_pred -CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----ccce
Q 013273 204 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNI 270 (446)
Q Consensus 204 -v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~~~ 270 (446)
.++||++||....... .....|+.+|...+.+.+ ..|+++++|+||++.++...... ....
T Consensus 156 ~~g~iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~ 229 (286)
T 3uve_A 156 RGGSIILTSSVGGLKAY------PHTGHYVAAKHGVVGLMRAFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDL 229 (286)
T ss_dssp SCEEEEEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTS
T ss_pred CCcEEEEECchhhccCC------CCccHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCCcccccchhhhccccc
Confidence 4699999998764321 334679999999998765 26899999999999988432100 0000
Q ss_pred --e--------ecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 271 --T--------LSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 271 --~--------~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
. ........+.+.+++|+|+++++++.+.. ...|++++|.++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~p~r~~~p~dvA~~v~fL~s~~a~~itG~~i~vdGG~ 283 (286)
T 3uve_A 230 ENPGPDDMAPICQMFHTLPIPWVEPIDISNAVLFFASDEARYITGVTLPIDAGS 283 (286)
T ss_dssp SSCCHHHHHHHHHTTCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cccchhhHHHHHHhhhccCCCcCCHHHHHHHHHHHcCccccCCcCCEEeECCcc
Confidence 0 00111122567899999999999997643 3568999998774
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=205.26 Aligned_cols=226 Identities=14% Similarity=0.125 Sum_probs=161.4
Q ss_pred CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
...+++||||||+ |+||+++++.|+++|++|++++|+....+.+.+..+.. +++.++.+|++|.
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~~~ 76 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEF--------------GSELVFPCDVADD 76 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHT--------------TCCCEEECCTTCH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHc--------------CCcEEEECCCCCH
Confidence 4677899999999 99999999999999999999999865444333222221 4588999999999
Q ss_pred hcHHHHhc-------CCCEEEEcccCCCC-----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccc
Q 013273 155 VQIEPALG-------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 214 (446)
Q Consensus 155 ~~~~~a~~-------~~D~VI~~Ag~~~~-----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~ 214 (446)
++++++++ ++|+||||||.... +..++...+++|+.++.++++++... ..++||++||..
T Consensus 77 ~~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~ 156 (271)
T 3ek2_A 77 AQIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAKAALPMLSDDASLLTLSYLG 156 (271)
T ss_dssp HHHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHHHHGGGEEEEEEEEEEECGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHHHHHHHhccCceEEEEeccc
Confidence 98888773 68999999996432 22234456889999999999999765 235899999987
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--cceeecccCcccCCccCH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~~~~~~~~~~~~~~~v~~ 285 (446)
.... ......|+.+|+..+.+.+ ..|+++++|+||++.++....... ............+.+.++
T Consensus 157 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p 230 (271)
T 3ek2_A 157 AERA------IPNYNTMGLAKAALEASVRYLAVSLGAKGVRVNAISAGPIKTLAASGIKSFGKILDFVESNSPLKRNVTI 230 (271)
T ss_dssp GTSB------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCC-----CCCHHHHHHHHHHHHHSTTSSCCCH
T ss_pred cccC------CCCccchhHHHHHHHHHHHHHHHHHHhcCcEEEEEecCcccchhhhcccchHHHHHHHHhcCCcCCCCCH
Confidence 6432 2345679999999998765 369999999999999874221100 000001112234567899
Q ss_pred HHHHHHHHHHHhCC-CCCCCcEEEEecCCCCChhhHHH
Q 013273 286 LQVAELLACMAKNR-SLSYCKVVEVIAETTAPLTPMEE 322 (446)
Q Consensus 286 ~DvA~ai~~ll~~~-~~~~~~v~ni~~~~~~t~~~i~e 322 (446)
+|+|+++++++.+. ....|++|++.++....+.++.+
T Consensus 231 edva~~i~~l~s~~~~~~tG~~i~vdgG~~~~~~~~~~ 268 (271)
T 3ek2_A 231 EQVGNAGAFLLSDLASGVTAEVMHVDSGFNAVVGGMAG 268 (271)
T ss_dssp HHHHHHHHHHHSGGGTTCCSEEEEESTTGGGBCCCC--
T ss_pred HHHHHHHHHHcCcccCCeeeeEEEECCCeeeehhhhhh
Confidence 99999999999864 23578999999887666555543
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=5.4e-23 Score=196.00 Aligned_cols=206 Identities=10% Similarity=0.033 Sum_probs=157.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+||||||+++||+++++.|+++|++|++++|++++..++.+ ++ .++.++.+|++|.+++++
T Consensus 2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~-------------~~----~~~~~~~~Dv~~~~~v~~ 64 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAK-------------ER----PNLFYFHGDVADPLTLKK 64 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHT-------------TC----TTEEEEECCTTSHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------hc----CCEEEEEecCCCHHHHHH
Confidence 4789999999999999999999999999999999877655432 12 678999999999988887
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchh
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++ +++|++|||||.... +.++++..+++|+.++.++.+++... +-+++|++||.......
T Consensus 65 ~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~~~~---- 140 (247)
T 3ged_A 65 FVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAFQSE---- 140 (247)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGTSCC----
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccccCC----
Confidence 75 679999999996432 33456677899999999998887532 23699999998764322
Q ss_pred hhchhhHHHHHHHHHHHHHH------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHh
Q 013273 224 ILNLFWGVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
.....|+.+|..++.+.+ ..|++++.|.||++..+....... -.......+.+..++|||+++++|+.
T Consensus 141 --~~~~~Y~asKaal~~ltk~lA~ela~~IrVN~I~PG~i~t~~~~~~~~----~~~~~~Pl~R~g~pediA~~v~fL~s 214 (247)
T 3ged_A 141 --PDSEAYASAKGGIVALTHALAMSLGPDVLVNCIAPGWINVTEQQEFTQ----EDCAAIPAGKVGTPKDISNMVLFLCQ 214 (247)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCCCC---CCH----HHHHTSTTSSCBCHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEecCcCCCCCcHHHHH----HHHhcCCCCCCcCHHHHHHHHHHHHh
Confidence 234579999999987765 258999999999998764321100 00112234567899999999999998
Q ss_pred CCCCCCCcEEEEecCC
Q 013273 298 NRSLSYCKVVEVIAET 313 (446)
Q Consensus 298 ~~~~~~~~v~ni~~~~ 313 (446)
+. ...|+++.|-++-
T Consensus 215 ~~-~iTG~~i~VDGG~ 229 (247)
T 3ged_A 215 QD-FITGETIIVDGGM 229 (247)
T ss_dssp CS-SCCSCEEEESTTG
T ss_pred CC-CCCCCeEEECcCH
Confidence 64 4679999887774
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.8e-23 Score=195.69 Aligned_cols=188 Identities=15% Similarity=0.070 Sum_probs=137.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ .++.++.+|++|.++++
T Consensus 4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----------------~~~~~~~~D~~~~~~~~ 66 (234)
T 2ehd_A 4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAEL-----------------EGALPLPGDVREEGDWA 66 (234)
T ss_dssp CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-----------------hhceEEEecCCCHHHHH
Confidence 3568999999999999999999999999999999987665543311 36889999999998888
Q ss_pred HHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCc
Q 013273 159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++ +++|+||||||.... +..++...+++|+.++.++++.+ ++.+.++||++||..+...
T Consensus 67 ~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~--- 143 (234)
T 2ehd_A 67 RAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPALLRRGGGTIVNVGSLAGKNP--- 143 (234)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCTTTTSC---
T ss_pred HHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCcEEEEECCchhcCC---
Confidence 776 478999999996432 22234556789999998666554 5567789999999876432
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|...+.+.+ ..|+++++||||++.++..... . .. + .+++++|+|+++++
T Consensus 144 ---~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~--~~-~-~~~~~~dvA~~~~~ 209 (234)
T 2ehd_A 144 ---FKGGAAYNASKFGLLGLAGAAMLDLREANVRVVNVLPGSVDTGFAGNT-------P--GQ-A-WKLKPEDVAQAVLF 209 (234)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEECC---------------------------CCHHHHHHHHHH
T ss_pred ---CCCCchhhHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcCCccccc-------c--cc-c-CCCCHHHHHHHHHH
Confidence 1345679999998887754 3699999999999987632110 0 00 1 15899999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++.++.
T Consensus 210 l~~~~~ 215 (234)
T 2ehd_A 210 ALEMPG 215 (234)
T ss_dssp HHHSCC
T ss_pred HhCCCc
Confidence 998865
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=205.72 Aligned_cols=229 Identities=17% Similarity=0.167 Sum_probs=153.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-----hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-----QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-----~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
+.+++||||||+||||+++++.|+++|++|++.+|+. ++.+.+.+.+... + .++.++.+|++
T Consensus 3 m~~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~---------~----~~~~~~~~Dvt 69 (324)
T 3u9l_A 3 MSKKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDN---------D----VDLRTLELDVQ 69 (324)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHH---------T----CCEEEEECCTT
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhc---------C----CcEEEEEeecC
Confidence 4567999999999999999999999999999998863 3333333333221 1 57999999999
Q ss_pred ChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccc
Q 013273 153 KRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGT 215 (446)
Q Consensus 153 d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~ 215 (446)
|.++++++++ ++|+||||||.... +..++...+++|+.|+.++++++ ++.+.++||++||.+.
T Consensus 70 d~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~m~~~~~g~iV~isS~~~ 149 (324)
T 3u9l_A 70 SQVSVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPHMRRQKHGLLIWISSSSS 149 (324)
T ss_dssp CHHHHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGG
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEEecchh
Confidence 9999888774 89999999996432 22334556899999999999998 5567789999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccce---------ee-cc---c
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNI---------TL-SQ---E 275 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~---------~~-~~---~ 275 (446)
..... .....|+.+|..+|.+.+ ..|+++++|+||++.++...+...... .. .. .
T Consensus 150 ~~~~~-----~~~~~Y~asKaa~~~~~~~la~el~~~gI~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (324)
T 3u9l_A 150 AGGTP-----PYLAPYFAAKAAMDAIAVQYARELSRWGIETSIIVPGAFTSGTNHFAHSGVPDDHARQAEYEAGPNAGLG 224 (324)
T ss_dssp TSCCC-----SSCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCC---------CBCCSCHHHHHHHHHTTTTTHH
T ss_pred ccCCC-----CcchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEECCccccCchhhcccCCchHHHHHHhhccccccCCH
Confidence 42211 224579999999998765 269999999999998764332111000 00 00 0
Q ss_pred -------CcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHH
Q 013273 276 -------DTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLA 325 (446)
Q Consensus 276 -------~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~ 325 (446)
..+.....+++|||++++.++..+.......+ +.++.......+.+++.
T Consensus 225 ~~~~~~~~~l~~~~~~p~~vA~aiv~~~~~~~~~~~~~~-~~gp~~~~~~~~~~~~~ 280 (324)
T 3u9l_A 225 EEIKKAFAAIVPPDADVSLVADAIVRVVGTASGKRPFRV-HVDPAEDGADVGFSVLD 280 (324)
T ss_dssp HHHHHHHHHTSCTTCCTHHHHHHHHHHHTSCTTCCCSEE-EECTTCCSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHhcCCCCCCCeEE-EeCCcchHHHHHHHHHH
Confidence 00111236899999999999988742223334 34544445444444433
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.7e-23 Score=202.10 Aligned_cols=217 Identities=14% Similarity=0.099 Sum_probs=155.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+..++++|||||+|+||+++++.|+++|++|+++++ +.+..+.+.+.++.. + .++.++.+|++|.+
T Consensus 24 ~~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~Dl~~~~ 90 (267)
T 3u5t_A 24 METNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAA---------G----GKALTAQADVSDPA 90 (267)
T ss_dssp ---CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHT---------T----CCEEEEECCTTCHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhc---------C----CeEEEEEcCCCCHH
Confidence 456789999999999999999999999999999854 555666665555432 2 57899999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~ 220 (446)
++++++ +++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.......
T Consensus 91 ~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~~~~~~- 169 (267)
T 3u5t_A 91 AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQVGLLH- 169 (267)
T ss_dssp HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTHHHHCC-
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChhhccCC-
Confidence 888876 478999999996432 22234556789999999999998754 23599999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++........ ...........+.+.+++|+|+++
T Consensus 170 -----~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v 244 (267)
T 3u5t_A 170 -----PSYGIYAAAKAGVEAMTHVLSKELRGRDITVNAVAPGPTATDLFLEGKSDEVRDRFAKLAPLERLGTPQDIAGAV 244 (267)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHTTTSCCEEEEEEECCBC-----------CHHHHHTSSTTCSCBCHHHHHHHH
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhhhhCCEEEEEEECCCcCccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 334579999999998876 2589999999999988742111000 000111223345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++.+.. ...|+++++.++
T Consensus 245 ~~L~s~~~~~itG~~i~vdGG 265 (267)
T 3u5t_A 245 AFLAGPDGAWVNGQVLRANGG 265 (267)
T ss_dssp HHHHSTTTTTCCSEEEEESSS
T ss_pred HHHhCccccCccCCEEEeCCC
Confidence 99998654 346889988765
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=198.49 Aligned_cols=214 Identities=13% Similarity=0.065 Sum_probs=160.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC--CCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~ 154 (446)
++.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... + ..++.++.+|+ +|.
T Consensus 9 ~l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~D~~~~~~ 76 (252)
T 3f1l_A 9 LLNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEE---------T---GRQPQWFILDLLTCTS 76 (252)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------H---SCCCEEEECCTTTCCH
T ss_pred ccCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhh---------c---CCCceEEEEecccCCH
Confidence 467789999999999999999999999999999999998888777666543 1 13789999999 888
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEcccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN 216 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~ 216 (446)
+++++++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+.++||++||....
T Consensus 77 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~g~iv~isS~~~~ 156 (252)
T 3f1l_A 77 ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQALLPLLLKSDAGSLVFTSSSVGR 156 (252)
T ss_dssp HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHHCCCCEEEEECChhhc
Confidence 8877766 479999999996321 22234556889999999999988 45567899999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH----h--CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~--~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
... .....|+.+|...+.+.+ + ..++++.|+||++.++..... . .......+.+++|+|+
T Consensus 157 ~~~------~~~~~Y~asK~a~~~l~~~la~e~~~~irvn~v~PG~v~t~~~~~~------~--~~~~~~~~~~p~dva~ 222 (252)
T 3f1l_A 157 QGR------ANWGAYAASKFATEGMMQVLADEYQQRLRVNCINPGGTRTAMRASA------F--PTEDPQKLKTPADIMP 222 (252)
T ss_dssp SCC------TTCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECCSBSSHHHHHH------C--TTCCGGGSBCTGGGHH
T ss_pred cCC------CCCchhHHHHHHHHHHHHHHHHHhcCCcEEEEEecCcccCchhhhh------C--CccchhccCCHHHHHH
Confidence 321 334679999999998775 2 239999999999987631110 0 0111224678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCCCCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAETTAP 316 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~~~t 316 (446)
++++++.+.. ...|+++++.++...+
T Consensus 223 ~~~~L~s~~~~~itG~~i~vdgG~~~~ 249 (252)
T 3f1l_A 223 LYLWLMGDDSRRKTGMTFDAQPGRKPG 249 (252)
T ss_dssp HHHHHHSGGGTTCCSCEEESSCC----
T ss_pred HHHHHcCccccCCCCCEEEeCCCcCCC
Confidence 9999998653 3568999998886543
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=8.5e-24 Score=203.24 Aligned_cols=216 Identities=13% Similarity=0.069 Sum_probs=158.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + .++.++.+|++|.+++
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~~~ 71 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---------G----VEARSYVCDVTSEEAV 71 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------T----SCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988777666555431 1 5789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCC-CC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~-~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.. .. +..++...+++|+.++.++++++.. .+.++||++||.......
T Consensus 72 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~ 151 (262)
T 1zem_A 72 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP 151 (262)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCcEEEEEcchhhccCC
Confidence 7766 4899999999964 21 2233456688999999999988754 356799999997653321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc------------cc--cc-e-eecccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------------ET--HN-I-TLSQED 276 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~------------~~--~~-~-~~~~~~ 276 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++..... .. .. . ......
T Consensus 152 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (262)
T 1zem_A 152 ------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS 225 (262)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHHhhCeEEEEEecCCcCcchhhhhccchhhhccccccccCHHHHHHHHHhc
Confidence 234579999999887765 3699999999999987732110 00 00 0 000011
Q ss_pred cccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 277 ~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
...+.+.+++|+|+++++++.+.. ...|+++++.++
T Consensus 226 ~p~~r~~~p~dvA~~v~~l~s~~~~~itG~~i~vdGG 262 (262)
T 1zem_A 226 VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 262 (262)
T ss_dssp STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCCCCcCHHHHHHHHHHHcCchhcCcCCcEEecCCC
Confidence 223457899999999999997643 346788877553
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=5.5e-24 Score=204.79 Aligned_cols=217 Identities=12% Similarity=0.082 Sum_probs=157.5
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+ |+||+++++.|+++|++|++++|+. +.....+++... . ++..++.+|++|.+
T Consensus 7 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~-~~~~~~~~l~~~---------~----~~~~~~~~D~~~~~ 72 (265)
T 1qsg_A 7 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQND-KLKGRVEEFAAQ---------L----GSDIVLQCDVAEDA 72 (265)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESST-TTHHHHHHHHHH---------T----TCCCEEECCTTCHH
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcH-HHHHHHHHHHHh---------c----CCcEEEEccCCCHH
Confidence 456899999999 9999999999999999999999987 333333333221 1 23578999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCC-----------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 156 QIEPALG-------NASVVICCIGASE-----------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~-----------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+++++++ ++|+||||||... .+..+++..+++|+.++.++++++... ..++||++||...
T Consensus 73 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 152 (265)
T 1qsg_A 73 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA 152 (265)
T ss_dssp HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEcchhh
Confidence 8888774 6899999999643 222345567889999999999999765 2259999999766
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|...+.+.+ ..|+++++|+||+++++....... ... .........+.+++++
T Consensus 153 ~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 226 (265)
T 1qsg_A 153 ERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE 226 (265)
T ss_dssp TSBC------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccCC------CCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCccchhhcccccHHHHHHHHhcCCCCCCCCHH
Confidence 3321 234579999999998875 258999999999999985321100 000 0000111234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+|+++++++.+.. ...+++|++.++..
T Consensus 227 dva~~v~~l~s~~~~~~tG~~~~vdgG~~ 255 (265)
T 1qsg_A 227 DVGNSAAFLCSDLSAGISGEVVHVDGGFS 255 (265)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHhCchhcCccCCEEEECCCcC
Confidence 99999999997643 23588999988753
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=202.75 Aligned_cols=218 Identities=10% Similarity=0.097 Sum_probs=162.7
Q ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.+.+++||||||+| +||+++++.|+++|++|++++|+....+.+.+..+.. +++.++.+|++|.
T Consensus 27 ~l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~ 92 (296)
T 3k31_A 27 LMEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESL--------------GVKLTVPCDVSDA 92 (296)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHH--------------TCCEEEECCTTCH
T ss_pred ccCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhc--------------CCeEEEEcCCCCH
Confidence 35678999999997 9999999999999999999999976555544433332 4578999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCC----------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~----------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+++++++ +++|+||||||... .+..++...+++|+.++.++++++... ..++||++||...
T Consensus 93 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~IV~isS~~~ 172 (296)
T 3k31_A 93 ESVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASKAEPLMTNGGSILTLSYYGA 172 (296)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEEEehhh
Confidence 9888876 47899999999653 122345566889999999999999764 2359999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-c-eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-N-ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~-~~~~~~~~~~~~~v~~~ 286 (446)
... ......|+.+|..++.+.+ ..|+++++|+||+++++........ . ..........+.+..++
T Consensus 173 ~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 246 (296)
T 3k31_A 173 EKV------VPHYNVMGVCKAALEASVKYLAVDLGKQQIRVNAISAGPVRTLASSGISDFHYILTWNKYNSPLRRNTTLD 246 (296)
T ss_dssp TSC------CTTTTHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECCCCCSSCCSCHHHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccC------CCCchhhHHHHHHHHHHHHHHHHHHhhcCcEEEEEEECCCcCchhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence 432 1345579999999998765 2699999999999998743211000 0 00001112345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+|+++++++.+.. ...|++++|.++..
T Consensus 247 dvA~~v~fL~s~~a~~itG~~i~vdGG~~ 275 (296)
T 3k31_A 247 DVGGAALYLLSDLGRGTTGETVHVDCGYH 275 (296)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHcCCccCCccCCEEEECCCcc
Confidence 99999999998643 35689999988754
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.4e-23 Score=198.70 Aligned_cols=217 Identities=15% Similarity=0.135 Sum_probs=158.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc-------------CchhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR-------------SVQRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R-------------~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
+.++++|||||+|+||+++++.|+++|++|++++| +.+....+.+.++.. + .++
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 75 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAA---------N----RRI 75 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHT---------T----CCE
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhc---------C----CeE
Confidence 56789999999999999999999999999999998 444444444443321 2 679
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCE
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNH 206 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r 206 (446)
.++.+|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++
T Consensus 76 ~~~~~D~~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~ 155 (277)
T 3tsc_A 76 VAAVVDTRDFDRLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPRIIEGGRGGS 155 (277)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCE
Confidence 99999999999888776 469999999996532 2234556689999999999988643 23 469
Q ss_pred EEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc----------cccc
Q 013273 207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK----------ETHN 269 (446)
Q Consensus 207 ~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~----------~~~~ 269 (446)
||++||....... .....|+.+|+..+.+.+ ..|+++++|+||++.++..... ....
T Consensus 156 iv~isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 229 (277)
T 3tsc_A 156 IILISSAAGMKMQ------PFMIHYTASKHAVTGLARAFAAELGKHSIRVNSVHPGPVNTPMGSGDMVTAVGQAMETNPQ 229 (277)
T ss_dssp EEEECCGGGTSCC------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSSGGGSHHHHHHHHHHHHTCGG
T ss_pred EEEEccHhhCCCC------CCchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeCCCcCCcccchhhhhhhhcccccHH
Confidence 9999998764322 334579999999998876 2689999999999998742210 0000
Q ss_pred eeecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 270 ~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
............+.+++|+|+++++++.+.. ...|++++|.++.
T Consensus 230 ~~~~~~~~~p~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 274 (277)
T 3tsc_A 230 LSHVLTPFLPDWVAEPEDIADTVCWLASDESRKVTAAQIPVDQGS 274 (277)
T ss_dssp GTTTTCCSSSCSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhhhccCCCCCCHHHHHHHHHHHhCccccCCcCCEEeeCCCc
Confidence 0000011112247899999999999997653 3468999987763
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=201.39 Aligned_cols=215 Identities=15% Similarity=0.114 Sum_probs=159.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++++||||||+|+||+++++.|+++|++|+++. |+.+......+.+... + .++.++.+|++|.++
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~ 90 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVAN---------G----GNGRLLSFDVANREQ 90 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhc---------C----CceEEEEecCCCHHH
Confidence 4568999999999999999999999999997765 5666666655555432 2 679999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccccCC
Q 013273 157 IEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||......
T Consensus 91 ~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~ 170 (267)
T 4iiu_A 91 CREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMPMIGARQGGRIITLSSVSGVMG 170 (267)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCHHHHHC
T ss_pred HHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcchHhccC
Confidence 888764 79999999996532 223445668899999999999873 456679999999765332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++....... ...........+.+.+++|+|++
T Consensus 171 ------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~-~~~~~~~~~p~~~~~~~edva~~ 243 (267)
T 4iiu_A 171 ------NRGQVNYSAAKAGIIGATKALAIELAKRKITVNCIAPGLIDTGMIEMEES-ALKEAMSMIPMKRMGQAEEVAGL 243 (267)
T ss_dssp ------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSTTCCCCHH-HHHHHHHTCTTCSCBCHHHHHHH
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHHhhcCeEEEEEEEeeecCCcccccHH-HHHHHHhcCCCCCCcCHHHHHHH
Confidence 1345679999998887664 358999999999999875321100 00001112234457899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.+.. ...|+++++.++
T Consensus 244 ~~~L~s~~~~~itG~~i~vdGG 265 (267)
T 4iiu_A 244 ASYLMSDIAGYVTRQVISINGG 265 (267)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCCcccCccCCEEEeCCC
Confidence 999998643 356899998776
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=6e-24 Score=203.55 Aligned_cols=217 Identities=13% Similarity=0.050 Sum_probs=166.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||+++++.|+++|++|++.+|+.++.++..+++++. | .++.++.+|++|.++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~---------g----~~~~~~~~Dv~~~~~ 72 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRK---------G----YDAHGVAFDVTDELA 72 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHT---------T----CCEEECCCCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeeCCCHHH
Confidence 467899999999999999999999999999999999999888877777653 2 578999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|++|||||... .+.++|+..+++|+.++.++.+++. +.+.++||++||......
T Consensus 73 v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~~~ 152 (255)
T 4g81_D 73 IEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQAA 152 (255)
T ss_dssp HHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSB
T ss_pred HHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhcCC
Confidence 88776 57899999999643 2344567778999999999988773 235579999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA 289 (446)
. .....|+.+|..++.+.+ .+|++++.|.||++.++...... .... .........+.+..++|||
T Consensus 153 ~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pediA 226 (255)
T 4g81_D 153 R------PTVAPYTAAKGGIKMLTCSMAAEWAQFNIQTNAIGPGYILTDMNTALIEDKQFDSWVKSSTPSQRWGRPEELI 226 (255)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGHHHHTCHHHHHHHHHHSTTCSCBCGGGGH
T ss_pred C------CCchhHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCCchhhcccCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence 2 234579999999988766 37999999999999887422110 0000 0001122345678899999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++|+.+.. ...|+++.|-++
T Consensus 227 ~~v~fL~S~~a~~iTG~~i~VDGG 250 (255)
T 4g81_D 227 GTAIFLSSKASDYINGQIIYVDGG 250 (255)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhCCCcCCEEEECCC
Confidence 99999997643 356888888665
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=204.60 Aligned_cols=215 Identities=15% Similarity=0.141 Sum_probs=160.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dl~~~~~v 91 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL------------G----NRAEFVSTNVTSEDSV 91 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh------------C----CceEEEEcCCCCHHHH
Confidence 46689999999999999999999999999999999988877665543 1 5799999999999999
Q ss_pred HHHhc------CCCEEEEc-ccCCCC-----------ccCCCCCcccchHHHHHHHHHHHHh----------CCCCEEEE
Q 013273 158 EPALG------NASVVICC-IGASEK-----------EVFDITGPYRIDFQATKNLVDAATI----------AKVNHFIM 209 (446)
Q Consensus 158 ~~a~~------~~D~VI~~-Ag~~~~-----------~~~~~~~~~~vNv~g~~~l~~aa~~----------~~v~r~V~ 209 (446)
+++++ ++|+|||| +|.... +..++...+++|+.++.++++++.. .+.++||+
T Consensus 92 ~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~g~iv~ 171 (281)
T 3ppi_A 92 LAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVARLVAASIAAAEPRENGERGALVL 171 (281)
T ss_dssp HHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCCCTTSCCEEEEE
T ss_pred HHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhhcccccCCCeEEEE
Confidence 88774 67999999 443221 1112455688999999999988852 23459999
Q ss_pred EccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc-eeecccCcccCC
Q 013273 210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN-ITLSQEDTLFGG 281 (446)
Q Consensus 210 vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~-~~~~~~~~~~~~ 281 (446)
+||....... .....|+.+|...+.+.+ ..|+++++|+||++.++......... ..+.......+.
T Consensus 172 isS~~~~~~~------~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~ 245 (281)
T 3ppi_A 172 TASIAGYEGQ------IGQTAYAAAKAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIMESVGEEALAKFAANIPFPKR 245 (281)
T ss_dssp ECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTTCHHHHHHHHHTCCSSSS
T ss_pred EecccccCCC------CCCcccHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhhcccHHHHHHHHhcCCCCCC
Confidence 9998764332 345679999999887765 26899999999999876321100000 001111112256
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
+++++|+|+++++++.+.. ..|+++++.++...
T Consensus 246 ~~~pedvA~~v~~l~s~~~-~tG~~i~vdGG~~~ 278 (281)
T 3ppi_A 246 LGTPDEFADAAAFLLTNGY-INGEVMRLDGAQRF 278 (281)
T ss_dssp CBCHHHHHHHHHHHHHCSS-CCSCEEEESTTCCC
T ss_pred CCCHHHHHHHHHHHHcCCC-cCCcEEEECCCccc
Confidence 7899999999999998754 67999999888654
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.90 E-value=8.7e-24 Score=194.56 Aligned_cols=181 Identities=14% Similarity=0.053 Sum_probs=141.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+||||||+||||+++++.|+ +|++|++++|+.. ++.+|++|.+++++
T Consensus 3 kM~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~------------------------------~~~~D~~~~~~~~~ 51 (202)
T 3d7l_A 3 AMKILLIGASGTLGSAVKERLE-KKAEVITAGRHSG------------------------------DVTVDITNIDSIKK 51 (202)
T ss_dssp SCEEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS------------------------------SEECCTTCHHHHHH
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc------------------------------ceeeecCCHHHHHH
Confidence 3589999999999999999999 9999999999752 36799999999998
Q ss_pred HhcC---CCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchhhhch
Q 013273 160 ALGN---ASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILNL 227 (446)
Q Consensus 160 a~~~---~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~~~~~ 227 (446)
+++. +|+||||||..... ..++...+++|+.++.++++++.+. + ++||++||..+... ..+
T Consensus 52 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~iv~~sS~~~~~~------~~~ 124 (202)
T 3d7l_A 52 MYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDK-GSFTLTTGIMMEDP------IVQ 124 (202)
T ss_dssp HHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEE-EEEEEECCGGGTSC------CTT
T ss_pred HHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccC-CEEEEEcchhhcCC------CCc
Confidence 8754 89999999964321 1223345689999999999999876 4 69999999766332 234
Q ss_pred hhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCC
Q 013273 228 FWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSL 301 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~ 301 (446)
...|+.+|...|.+++. .|+++++||||+++++...+. .......+++++|+|++++.++.+.
T Consensus 125 ~~~Y~~sK~~~~~~~~~~~~e~~~gi~v~~v~pg~v~~~~~~~~---------~~~~~~~~~~~~dva~~~~~~~~~~-- 193 (202)
T 3d7l_A 125 GASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNVLEESWDKLE---------PFFEGFLPVPAAKVARAFEKSVFGA-- 193 (202)
T ss_dssp CHHHHHHHHHHHHHHHHHTTSCSTTCEEEEEEECCBGGGHHHHG---------GGSTTCCCBCHHHHHHHHHHHHHSC--
T ss_pred cHHHHHHHHHHHHHHHHHHHHccCCeEEEEEecCccCCchhhhh---------hhccccCCCCHHHHHHHHHHhhhcc--
Confidence 46799999999988863 489999999999998843211 1112346799999999999988543
Q ss_pred CCCcEEEE
Q 013273 302 SYCKVVEV 309 (446)
Q Consensus 302 ~~~~v~ni 309 (446)
..|++|||
T Consensus 194 ~~G~~~~v 201 (202)
T 3d7l_A 194 QTGESYQV 201 (202)
T ss_dssp CCSCEEEE
T ss_pred ccCceEec
Confidence 45788887
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=202.83 Aligned_cols=218 Identities=10% Similarity=0.110 Sum_probs=158.9
Q ss_pred CCCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~--IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++.+++||||||+|+ ||+++++.|+++|++|++++|+....+.+.+..+.. +++.++.+|++|.
T Consensus 28 ~l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~Dv~d~ 93 (293)
T 3grk_A 28 LLQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEEL--------------GAFVAGHCDVADA 93 (293)
T ss_dssp TTTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHH--------------TCEEEEECCTTCH
T ss_pred cCCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc--------------CCceEEECCCCCH
Confidence 356789999999977 999999999999999999999965444333322222 4689999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCC----------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASE----------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~----------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+++++++ +++|+||||||... .+..++...+++|+.++.++++++... ..++||++||...
T Consensus 94 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 94 ASIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp HHHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 9888876 47899999999653 122344566889999999999999764 3459999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~~~ 286 (446)
... ......|+.+|+..+.+.+ ..|+++++|+||++.++......... ..........+.+.+++
T Consensus 174 ~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 247 (293)
T 3grk_A 174 EKV------MPNYNVMGVAKAALEASVKYLAVDLGPQNIRVNAISAGPIKTLAASGIGDFRYILKWNEYNAPLRRTVTID 247 (293)
T ss_dssp TSB------CTTTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCC------CCHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccC------CCchHHHHHHHHHHHHHHHHHHHHHhHhCCEEEEEecCCCcchhhhcccchHHHHHHHHhcCCCCCCCCHH
Confidence 432 1335579999999998765 26899999999999987422110000 00001122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+|+++++++.+.. ...|+++++.++..
T Consensus 248 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 276 (293)
T 3grk_A 248 EVGDVGLYFLSDLSRSVTGEVHHADSGYH 276 (293)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHcCccccCCcceEEEECCCcc
Confidence 99999999998643 35689999988753
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=3.2e-23 Score=197.86 Aligned_cols=207 Identities=13% Similarity=0.106 Sum_probs=149.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++||||||+|+||+++++.|+++|++|++++|+.+.... + +++.++ +|+ .++
T Consensus 16 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~-------~--------------~~~~~~-~D~--~~~ 71 (249)
T 1o5i_A 16 GIRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR-------S--------------GHRYVV-CDL--RKD 71 (249)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH-------T--------------CSEEEE-CCT--TTC
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHh-------h--------------CCeEEE-eeH--HHH
Confidence 4678899999999999999999999999999999998733221 1 356777 999 445
Q ss_pred HHHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCchh
Q 013273 157 IEPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 157 ~~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++++ .++|+||||||.... +..++...+++|+.++.++++++ ++.+.++||++||..+....
T Consensus 72 ~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~---- 147 (249)
T 1o5i_A 72 LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI---- 147 (249)
T ss_dssp HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC----
T ss_pred HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEcchHhcCCC----
Confidence 55554 489999999996432 22334556789999988776555 45577899999998764321
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee-ecccCcccCCccCHHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT-LSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~-~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.....|+.+|...+.+.+ ..|+++++||||+++++........... ........+.+++++|+|++++++
T Consensus 148 --~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~i~~l 225 (249)
T 1o5i_A 148 --ENLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFL 225 (249)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHH
T ss_pred --CCCchHHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCCCccCcccccchhhHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 345679999999987765 3699999999999999853211000000 000112235678999999999999
Q ss_pred HhCCC-CCCCcEEEEecCC
Q 013273 296 AKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~ 313 (446)
+.+.. ...|++|++.++.
T Consensus 226 ~s~~~~~~tG~~~~vdgG~ 244 (249)
T 1o5i_A 226 CSEKASYLTGQTIVVDGGL 244 (249)
T ss_dssp HSGGGTTCCSCEEEESTTC
T ss_pred cCccccCCCCCEEEECCCc
Confidence 97643 2458899998774
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.2e-24 Score=210.53 Aligned_cols=232 Identities=13% Similarity=0.049 Sum_probs=171.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC----------chhHHHHHHHHHHhhhcccccccCCCCCCceEE
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS----------VQRAENLVQSVKQMKLDGELANKGIQPVEMLEL 146 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~----------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~ 146 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+ .+....+.+++... + .++.+
T Consensus 24 ~l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~ 90 (322)
T 3qlj_A 24 VVDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAA---------G----GEAVA 90 (322)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHT---------T----CEEEE
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhc---------C----CcEEE
Confidence 3567899999999999999999999999999999997 56666666655432 2 57899
Q ss_pred EEcCCCChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC----------
Q 013273 147 VECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK---------- 203 (446)
Q Consensus 147 v~~Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~---------- 203 (446)
+.+|++|.++++++++ ++|+||||||.... +..+++..+++|+.++.++++++...-
T Consensus 91 ~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~~~~ 170 (322)
T 3qlj_A 91 DGSNVADWDQAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAYWRGLSKAGKAV 170 (322)
T ss_dssp ECCCTTSHHHHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred EECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHccccCCCC
Confidence 9999999998887764 89999999996432 233455668999999999999885321
Q ss_pred CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccC
Q 013273 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQED 276 (446)
Q Consensus 204 v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~ 276 (446)
-++||++||...... ......|+.+|..++.+.+ ..|+++++|+|| +.++.......... ...
T Consensus 171 ~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~~~~~~~---~~~ 240 (322)
T 3qlj_A 171 DGRIINTSSGAGLQG------SVGQGNYSAAKAGIATLTLVGAAEMGRYGVTVNAIAPS-ARTRMTETVFAEMM---ATQ 240 (322)
T ss_dssp CEEEEEECCHHHHHC------BTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCCSCCC--------
T ss_pred CcEEEEEcCHHHccC------CCCCccHHHHHHHHHHHHHHHHHHhcccCcEEEEecCC-CCCccchhhhhhhh---hcc
Confidence 149999999765322 1334579999999998875 279999999999 76553211110000 011
Q ss_pred cccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCC-----------------ChhhHHHHHHhccCCC
Q 013273 277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTA-----------------PLTPMEELLAKIPSQR 331 (446)
Q Consensus 277 ~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~-----------------t~~~i~e~l~~i~~~~ 331 (446)
.....+++++|+|+++++++.+.. ...|++|++.++... +..++.+.+.++++..
T Consensus 241 ~~~~~~~~pedva~~v~~L~s~~~~~itG~~i~vdGG~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~~~ 313 (322)
T 3qlj_A 241 DQDFDAMAPENVSPLVVWLGSAEARDVTGKVFEVEGGKIRVAEGWAHGPQIDKGARWDPAELGPVVADLLGKA 313 (322)
T ss_dssp ---CCTTCGGGTHHHHHHHTSGGGGGCCSCEEEEETTEEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHHHS
T ss_pred ccccCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCccccCCCcccccccCccCCCCHHHHHHHHHHHhhcc
Confidence 111245789999999999997643 246899999887643 6689999999988754
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.3e-23 Score=202.63 Aligned_cols=216 Identities=13% Similarity=0.112 Sum_probs=155.9
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+ |+||+++++.|+++|++|++++|+.. .....+.+... . +++.++.+|++|.+
T Consensus 19 l~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~ 84 (285)
T 2p91_A 19 LEGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPK-LEKRVREIAKG---------F----GSDLVVKCDVSLDE 84 (285)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGG-GHHHHHHHHHH---------T----TCCCEEECCTTCHH
T ss_pred cCCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHH-HHHHHHHHHHh---------c----CCeEEEEcCCCCHH
Confidence 456899999999 99999999999999999999999875 33333333221 1 34788999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccc
Q 013273 156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~ 215 (446)
+++++++ ++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.+.
T Consensus 85 ~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~g~iv~isS~~~ 164 (285)
T 2p91_A 85 DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTRELLPLMEGRNGAIVTLSYYGA 164 (285)
T ss_dssp HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGGTTSCCEEEEEECGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCEEEEEccchh
Confidence 8887763 78999999996432 22234556889999999999999764 2369999999766
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce-eecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI-TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~-~~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|...+.+.+ ..|+++++|+||+++++....... ... .........+.+.+++
T Consensus 165 ~~~~------~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 238 (285)
T 2p91_A 165 EKVV------PHYNVMGIAKAALESTVRYLAYDIAKHGHRINAISAGPVKTLAAYSITGFHLLMEHTTKVNPFGKPITIE 238 (285)
T ss_dssp TSBC------TTTTHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCSCC--CTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccCC------CCccHHHHHHHHHHHHHHHHHHHhcccCcEEEEEEeCcccCchhhcccchHHHHHHHHhcCCCCCCcCHH
Confidence 4321 234579999999998765 269999999999999985321100 000 0000111234578999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++++.+.. ...|++|++.++.
T Consensus 239 dva~~~~~l~s~~~~~~tG~~~~vdgg~ 266 (285)
T 2p91_A 239 DVGDTAVFLCSDWARAITGEVVHVDNGY 266 (285)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHcCCcccCCCCCEEEECCCc
Confidence 99999999997532 2358889888774
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.4e-23 Score=203.33 Aligned_cols=204 Identities=18% Similarity=0.072 Sum_probs=152.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++||||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dv~d~~~v 95 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQ---------G----FDAHGVVCDVRHLDEM 95 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CceEEEEccCCCHHHH
Confidence 46789999999999999999999999999999999998888877766542 2 5799999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~ 219 (446)
+++++ ++|+||||||.... +..++...+++|+.|+.++++++.. .+ .++||++||......
T Consensus 96 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~~~~- 174 (301)
T 3tjr_A 96 VRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPRLLEQGTGGHIAFTASFAGLVP- 174 (301)
T ss_dssp HHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGGTSC-
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhcCCCcEEEEeCchhhcCC-
Confidence 88764 79999999996532 2233456688999999999998743 33 569999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc---ccceee-------cccCcccCCc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE---THNITL-------SQEDTLFGGQ 282 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~---~~~~~~-------~~~~~~~~~~ 282 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...... ...... .........+
T Consensus 175 -----~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (301)
T 3tjr_A 175 -----NAGLGTYGVAKYGVVGLAETLAREVKPNGIGVSVLCPMVVETKLVSNSERIRGADYGMSATPEGAFGPLPTQDES 249 (301)
T ss_dssp -----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEECCSCCCSSHHHHHHHHC----------------------C
T ss_pred -----CCCchHHHHHHHHHHHHHHHHHHHhcccCcEEEEEECCccccccccccccccchhhccccChhhhccccccccCC
Confidence 2345679999999887765 26899999999999987421100 000000 0001112347
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 013273 283 VSNLQVAELLACMAKNRS 300 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~ 300 (446)
++++|+|++++.+++++.
T Consensus 250 ~~pedvA~~i~~~l~~~~ 267 (301)
T 3tjr_A 250 VSADDVARLTADAILANR 267 (301)
T ss_dssp CCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcCC
Confidence 899999999999998765
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=202.83 Aligned_cols=220 Identities=10% Similarity=0.119 Sum_probs=154.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh---HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|.... .+.+.++++.. ..++.++.+|++|
T Consensus 8 ~l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~Dv~d 74 (262)
T 3ksu_A 8 DLKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ-------------GAKVALYQSDLSN 74 (262)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT-------------TCEEEEEECCCCS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc-------------CCcEEEEECCCCC
Confidence 4567899999999999999999999999999999886543 33443333321 1579999999999
Q ss_pred hhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCC
Q 013273 154 RVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 154 ~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~ 218 (446)
.++++++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||......
T Consensus 75 ~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~ 154 (262)
T 3ksu_A 75 EEEVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATSLLAAY 154 (262)
T ss_dssp HHHHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCCHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEechhhccC
Confidence 999888773 78999999996432 22334556789999999999999875 4469999999765321
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++..... ..............+.+.+++|+|+
T Consensus 155 ------~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~r~~~pedvA~ 228 (262)
T 3ksu_A 155 ------TGFYSTYAGNKAPVEHYTRAASKELMKQQISVNAIAPGPMDTSFFYGQETKESTAFHKSQAMGNQLTKIEDIAP 228 (262)
T ss_dssp ------HCCCCC-----CHHHHHHHHHHHHTTTTTCEEEEEEECCCCTHHHHTCC------------CCCCSCCGGGTHH
T ss_pred ------CCCCchhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccccCchHHHHHHHhcCcccCCCCHHHHHH
Confidence 1234569999999998876 2589999999999987632110 0001111111223445789999999
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCC
Q 013273 291 LLACMAKNRSLSYCKVVEVIAETTA 315 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~~~~~ 315 (446)
++++++.+.....|+++++-++...
T Consensus 229 ~v~~L~s~~~~itG~~i~vdGg~~~ 253 (262)
T 3ksu_A 229 IIKFLTTDGWWINGQTIFANGGYTT 253 (262)
T ss_dssp HHHHHHTTTTTCCSCEEEESTTCCC
T ss_pred HHHHHcCCCCCccCCEEEECCCccC
Confidence 9999998744457899999877543
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=204.74 Aligned_cols=218 Identities=15% Similarity=0.116 Sum_probs=159.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC------------chhHHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------------VQRAENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~------------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+ .+....+.+.++.. + .++
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~----~~~ 109 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQ---------G----RRI 109 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHT---------T----CCE
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhc---------C----CeE
Confidence 3567899999999999999999999999999999886 33444443333321 2 579
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CC-CCE
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AK-VNH 206 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r 206 (446)
.++.+|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++
T Consensus 110 ~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~g~ 189 (317)
T 3oec_A 110 IARQADVRDLASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPSMIERGQGGS 189 (317)
T ss_dssp EEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTCSCEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999888876 479999999996532 2234556689999999999988843 32 468
Q ss_pred EEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-------ccc-ce-
Q 013273 207 FIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-------ETH-NI- 270 (446)
Q Consensus 207 ~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-------~~~-~~- 270 (446)
||++||....... .....|+.+|..++.+.+ ..|+++++|+||+++++..... ... ..
T Consensus 190 Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~ 263 (317)
T 3oec_A 190 VIFVSSTVGLRGA------PGQSHYAASKHGVQGLMLSLANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPT 263 (317)
T ss_dssp EEEECCGGGSSCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCC
T ss_pred EEEECcHHhcCCC------CCCcchHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccc
Confidence 9999998764322 345679999999998765 2699999999999998732110 000 00
Q ss_pred ------eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 271 ------TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 271 ------~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+.......+.+++++|||+++++++.+.. ...|++++|.++.
T Consensus 264 ~~~~~~~~~~~~~~p~~~~~pedvA~av~fL~s~~a~~itG~~i~vdGG~ 313 (317)
T 3oec_A 264 REDAAELFSQLTLLPIPWVEPEDVSNAVAWLASDEARYIHGAAIPVDGGQ 313 (317)
T ss_dssp HHHHHHHHTTTCSSSSSSBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhHHHHHHhhhccCCCCCCCHHHHHHHHHHHcCCcccCCCCCEEEECcch
Confidence 000111222567899999999999997643 3468999998774
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.2e-23 Score=203.38 Aligned_cols=220 Identities=13% Similarity=0.149 Sum_probs=162.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+.+++||||||+|+||+++++.|+++|+ +|++++|+.++.+.+.+++... ....++.++.+|++|.
T Consensus 31 l~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~d~ 99 (287)
T 3rku_A 31 LAKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQE-----------FPNAKVHVAQLDITQA 99 (287)
T ss_dssp HTTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHH-----------CTTCEEEEEECCTTCG
T ss_pred cCCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhh-----------CCCCeEEEEECCCCCH
Confidence 4578999999999999999999999997 9999999998888877766542 0125789999999999
Q ss_pred hcHHHHhc-------CCCEEEEcccCCC-C------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEcccccc
Q 013273 155 VQIEPALG-------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN 216 (446)
Q Consensus 155 ~~~~~a~~-------~~D~VI~~Ag~~~-~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~ 216 (446)
++++++++ ++|+||||||... . +..+++..+++|+.|+.++++++ ++.+.++||++||....
T Consensus 100 ~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~IV~isS~~~~ 179 (287)
T 3rku_A 100 EKIKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLPIFQAKNSGDIVNLGSIAGR 179 (287)
T ss_dssp GGHHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECChhhc
Confidence 99998874 6899999999643 1 22345566899999999999998 34567899999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
.. ......|+.+|..++.+.+ ..|+++++|+||++.++.....................+++++|||
T Consensus 180 ~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gIrvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~pedvA 253 (287)
T 3rku_A 180 DA------YPTGSIYCASKFAVGAFTDSLRKELINTKIRVILIAPGLVETEFSLVRYRGNEEQAKNVYKDTTPLMADDVA 253 (287)
T ss_dssp SC------CTTCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEESCEESSHHHHHTTTCHHHHHHHHTTSCCEEHHHHH
T ss_pred CC------CCCCchHHHHHHHHHHHHHHHHHHhhhcCCEEEEEeCCcCcCccccccccCcHHHHHHhhcccCCCCHHHHH
Confidence 32 1335679999999998765 2689999999999988731100000000000000111346899999
Q ss_pred HHHHHHHhCCCC-CCCcEEEEecCCC
Q 013273 290 ELLACMAKNRSL-SYCKVVEVIAETT 314 (446)
Q Consensus 290 ~ai~~ll~~~~~-~~~~v~ni~~~~~ 314 (446)
+++++++.++.. ..++++.+.++..
T Consensus 254 ~~v~~l~s~~~~~i~g~~i~v~~g~~ 279 (287)
T 3rku_A 254 DLIVYATSRKQNTVIADTLIFPTNQA 279 (287)
T ss_dssp HHHHHHHTSCTTEEEEEEEEEETTEE
T ss_pred HHHHHHhCCCCCeEecceEEeeCCCC
Confidence 999999987652 3577887776653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=2.9e-23 Score=196.56 Aligned_cols=201 Identities=12% Similarity=0.023 Sum_probs=144.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++||||||+|+||+++++.|+++| ++|++++|+.++.+.+.+ . ...++.++.+|++|.++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~----~------------~~~~~~~~~~D~~~~~~ 65 (250)
T 1yo6_A 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----I------------KDSRVHVLPLTVTCDKS 65 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----C------------CCTTEEEEECCTTCHHH
T ss_pred CCCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHh----c------------cCCceEEEEeecCCHHH
Confidence 45789999999999999999999999 999999999877654421 0 12579999999999998
Q ss_pred HHHHhc---------CCCEEEEcccCCC-C------ccCCCCCcccchHHHHHHHHHHHHhC----------C-----CC
Q 013273 157 IEPALG---------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATIA----------K-----VN 205 (446)
Q Consensus 157 ~~~a~~---------~~D~VI~~Ag~~~-~------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~-----v~ 205 (446)
++++++ ++|+||||||... . ...++...+++|+.++.++++++... + .+
T Consensus 66 ~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (250)
T 1yo6_A 66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA 145 (250)
T ss_dssp HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred HHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcccccCCCcccCCCc
Confidence 888775 8999999999654 1 12234456789999999998887543 4 67
Q ss_pred EEEEEccccccCCCC-chhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeecccCc
Q 013273 206 HFIMVSSLGTNKFGF-PAAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 277 (446)
Q Consensus 206 r~V~vSS~~~~~~~~-~~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~ 277 (446)
+||++||........ ......+...|+.+|+..|.+++. .|+++++||||++.++....
T Consensus 146 ~iv~isS~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~------------- 212 (250)
T 1yo6_A 146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGGK------------- 212 (250)
T ss_dssp EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred EEEEeccCccccCCcccccccCCccHHHHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCCCC-------------
Confidence 999999976633221 111113556799999999988752 48999999999998774210
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCC-CCCcEEEEe
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVEVI 310 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni~ 310 (446)
..+++++|+|+.++.++.+... ..++.+.+.
T Consensus 213 --~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~~ 244 (250)
T 1yo6_A 213 --NAALTVEQSTAELISSFNKLDNSHNGRFFMRN 244 (250)
T ss_dssp --------HHHHHHHHHHHTTCCGGGTTCEEETT
T ss_pred --CCCCCHHHHHHHHHHHHhcccccCCCeEEEEC
Confidence 1468999999999999987652 245555443
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.90 E-value=3.5e-23 Score=201.70 Aligned_cols=217 Identities=15% Similarity=0.126 Sum_probs=158.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-- 153 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-- 153 (446)
.+.++++|||||+|+||+++++.|+++|++|++++|+. ++...+.+++... .+ .++.++.+|++|
T Consensus 20 ~l~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dv~~~~ 87 (288)
T 2x9g_A 20 HMEAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKE--------RS----NTAVVCQADLTNSN 87 (288)
T ss_dssp --CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHH--------ST----TCEEEEECCCSCST
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhh--------cC----CceEEEEeecCCcc
Confidence 35678999999999999999999999999999999998 7776666555421 12 578999999999
Q ss_pred --hhcHHHHh-------cCCCEEEEcccCCCCcc----------------CCCCCcccchHHHHHHHHHHHHhC----C-
Q 013273 154 --RVQIEPAL-------GNASVVICCIGASEKEV----------------FDITGPYRIDFQATKNLVDAATIA----K- 203 (446)
Q Consensus 154 --~~~~~~a~-------~~~D~VI~~Ag~~~~~~----------------~~~~~~~~vNv~g~~~l~~aa~~~----~- 203 (446)
.+++++++ +++|+||||||...... .++...+++|+.++.++++++... +
T Consensus 88 ~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 167 (288)
T 2x9g_A 88 VLPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAPFLLTMSFAQRQKGTNP 167 (288)
T ss_dssp THHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHHHHHHHHHHHHC-----
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhcCC
Confidence 88877766 47999999999643211 123345789999999999888643 2
Q ss_pred -----CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee
Q 013273 204 -----VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT 271 (446)
Q Consensus 204 -----v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~ 271 (446)
.++||++||...... ......|+.+|+..+.+.+ ..|+++++|+||+++++. .... ....
T Consensus 168 ~~~~~~g~iv~isS~~~~~~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~~~~-~~~~ 239 (288)
T 2x9g_A 168 NCTSSNLSIVNLCDAMVDQP------CMAFSLYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-AMGE-EEKD 239 (288)
T ss_dssp ---CCCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-TSCH-HHHH
T ss_pred CCCCCCeEEEEEecccccCC------CCCCchHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-ccCh-HHHH
Confidence 469999999876432 1345679999999887765 259999999999999985 2110 0000
Q ss_pred ecccCcccCCc-cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 272 LSQEDTLFGGQ-VSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 272 ~~~~~~~~~~~-v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
........+.+ .+++|+|+++++++.+.. ...|+++++.++.
T Consensus 240 ~~~~~~p~~r~~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 283 (288)
T 2x9g_A 240 KWRRKVPLGRREASAEQIADAVIFLVSGSAQYITGSIIKVDGGL 283 (288)
T ss_dssp HHHHTCTTTSSCCCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCCEEEECcch
Confidence 00011223445 799999999999997642 3468888887763
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-23 Score=201.74 Aligned_cols=211 Identities=16% Similarity=0.143 Sum_probs=155.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|||||+|+||++++++|+++| +.|++++|+.++.+.+.+.+. .++.++.+|++|.+++
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v 65 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYG----------------DRFFYVVGDITEDSVL 65 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHG----------------GGEEEEESCTTSHHHH
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhC----------------CceEEEECCCCCHHHH
Confidence 4789999999999999999999985 789999999887776554321 5789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++ ++.+ ++||++||......
T Consensus 66 ~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~-g~iv~isS~~~~~~- 143 (254)
T 3kzv_A 66 KQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALPELKKTN-GNVVFVSSDACNMY- 143 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCSCCCCS-
T ss_pred HHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcC-CeEEEEcCchhccC-
Confidence 8776 478999999996421 22334556889999999999988 4445 79999999876433
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCcccccccc---------eeecccCcccCCccCH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHN---------ITLSQEDTLFGGQVSN 285 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~~~~---------~~~~~~~~~~~~~v~~ 285 (446)
......|+.+|...+.+.+. .|+++++|+||++.++......... ..........+.+.++
T Consensus 144 -----~~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p 218 (254)
T 3kzv_A 144 -----FSSWGAYGSSKAALNHFAMTLANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRGLKENNQLLDS 218 (254)
T ss_dssp -----SCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHHHHTTC----C
T ss_pred -----CCCcchHHHHHHHHHHHHHHHHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHHHHhcCCcCCc
Confidence 23456799999999988762 5899999999999987432110000 0000011223457899
Q ss_pred HHHHHHHHHHHhCC--CCCCCcEEEEecCC
Q 013273 286 LQVAELLACMAKNR--SLSYCKVVEVIAET 313 (446)
Q Consensus 286 ~DvA~ai~~ll~~~--~~~~~~v~ni~~~~ 313 (446)
+|+|+++++++.+. ....|+++++.++.
T Consensus 219 ~dva~~v~~L~s~~~~~~itG~~i~vdg~~ 248 (254)
T 3kzv_A 219 SVPATVYAKLALHGIPDGVNGQYLSYNDPA 248 (254)
T ss_dssp HHHHHHHHHHHHHCCCGGGTTCEEETTCGG
T ss_pred ccHHHHHHHHHhhcccCCCCccEEEecCcc
Confidence 99999999999876 33578888876654
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.90 E-value=9.3e-24 Score=204.06 Aligned_cols=208 Identities=14% Similarity=0.132 Sum_probs=156.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++||||||+|+||+++++.|+++|++|++++|+..... ..+.++.+|++|.++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~Dv~~~~~ 67 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV-----------------------NVSDHFKIDVTNEEE 67 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT-----------------------TSSEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc-----------------------CceeEEEecCCCHHH
Confidence 467899999999999999999999999999999999875321 357889999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||..+...
T Consensus 68 v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~- 146 (269)
T 3vtz_A 68 VKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPVMLAIGHGSIINIASVQSYAA- 146 (269)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSB-
T ss_pred HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCCEEEEECchhhccC-
Confidence 88876 379999999996432 2223455678999999999988753 46679999999876443
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccc-----------cceeecccCcccCCc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQ 282 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~~ 282 (446)
......|+.+|+..+.+.+. .++++++|+||+++++....... ............+.+
T Consensus 147 -----~~~~~~Y~asKaa~~~l~~~la~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~ 221 (269)
T 3vtz_A 147 -----TKNAAAYVTSKHALLGLTRSVAIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGRQHPMGRI 221 (269)
T ss_dssp -----CTTCHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHHHSTTSSC
T ss_pred -----CCCChhHHHHHHHHHHHHHHHHHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHhcCCCCCC
Confidence 23456799999999988762 38999999999999874211000 000000112234567
Q ss_pred cCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 283 VSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+++|+|+++++++.+.. ...|++|+|.++.
T Consensus 222 ~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 253 (269)
T 3vtz_A 222 GRPEEVAEVVAFLASDRSSFITGACLTVDGGL 253 (269)
T ss_dssp BCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCHHHHHHHHHHHhCCccCCCcCcEEEECCCc
Confidence 899999999999998653 3568999998874
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=1.8e-23 Score=199.28 Aligned_cols=206 Identities=14% Similarity=0.086 Sum_probs=150.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++.. .+..+.+|++|.+++
T Consensus 13 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------------------------~~~~~~~D~~~~~~~ 68 (247)
T 1uzm_A 13 FVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPK------------------------GLFGVEVDVTDSDAV 68 (247)
T ss_dssp CCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCT------------------------TSEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH------------------------HhcCeeccCCCHHHH
Confidence 56789999999999999999999999999999999875421 223488999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 69 ~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~-- 146 (247)
T 1uzm_A 69 DRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWG-- 146 (247)
T ss_dssp HHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC-----
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccC--
Confidence 8776 368999999996432 223455668899999999998875 356789999999865322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...................+.+++++|+|++++
T Consensus 147 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~ 222 (247)
T 1uzm_A 147 ----IGNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVVS 222 (247)
T ss_dssp ------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHHH
T ss_pred ----CCCChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1234679999999887765 26999999999999876321100000000001112345789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.++. ...|++|++.++.
T Consensus 223 ~l~s~~~~~~~G~~i~vdgG~ 243 (247)
T 1uzm_A 223 FLASEDASYISGAVIPVDGGM 243 (247)
T ss_dssp HHHSGGGTTCCSCEEEESTTT
T ss_pred HHcCccccCCcCCEEEECCCc
Confidence 9997642 3468899998774
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.2e-23 Score=199.44 Aligned_cols=211 Identities=13% Similarity=0.079 Sum_probs=157.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||+++++.|+++|++|++.+|+.+..+. ....++..+.+|++|.++
T Consensus 8 lf~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~-------------------~~~~~~~~~~~Dv~~~~~ 68 (242)
T 4b79_A 8 IYAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHA-------------------PRHPRIRREELDITDSQR 68 (242)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTS-------------------CCCTTEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhh-------------------hhcCCeEEEEecCCCHHH
Confidence 4578999999999999999999999999999999998765432 122689999999999999
Q ss_pred HHHHh---cCCCEEEEcccCCCC----ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchhhhc
Q 013273 157 IEPAL---GNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 157 ~~~a~---~~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
+++++ +++|++|||||.... +..+|+..+++|+.++..+.+++... +-++||++||....... .
T Consensus 69 v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~------~ 142 (242)
T 4b79_A 69 LQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYSTFGS------A 142 (242)
T ss_dssp HHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGTSCC------S
T ss_pred HHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeeccccCCC------C
Confidence 88876 678999999996432 33456677899999999998887432 23699999998764322 2
Q ss_pred hhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc--ceeecccCcccCCccCHHHHHHHHHHHHh
Q 013273 227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~--~~~~~~~~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
....|..+|..+..+.+ .+||+++.|.||++.++........ ...........+.+..++|||+++++|+.
T Consensus 143 ~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~m~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~fLaS 222 (242)
T 4b79_A 143 DRPAYSASKGAIVQLTRSLACEYAAERIRVNAIAPGWIDTPLGAGLKADVEATRRIMQRTPLARWGEAPEVASAAAFLCG 222 (242)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCC-----CCCHHHHHHHHHTCTTCSCBCHHHHHHHHHHHTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCCCCChhhhcccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhC
Confidence 34579999999998766 3799999999999988742111000 00001112335567899999999999997
Q ss_pred CCC-CCCCcEEEEecC
Q 013273 298 NRS-LSYCKVVEVIAE 312 (446)
Q Consensus 298 ~~~-~~~~~v~ni~~~ 312 (446)
+.. ...|+++.|-++
T Consensus 223 d~a~~iTG~~l~VDGG 238 (242)
T 4b79_A 223 PGASFVTGAVLAVDGG 238 (242)
T ss_dssp GGGTTCCSCEEEESTT
T ss_pred chhcCccCceEEECcc
Confidence 653 346888888665
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.3e-23 Score=203.77 Aligned_cols=216 Identities=11% Similarity=0.095 Sum_probs=163.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||+++++.|+++|++|++++|+.++...+.+++... + .++.++.+|++|.+++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~~ 97 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIAS---------G----GTAQELAGDLSEAGAG 97 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHT---------T----CCEEEEECCTTSTTHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhc---------C----CeEEEEEecCCCHHHH
Confidence 56789999999999999999999999999999999998888777666542 2 6799999999999888
Q ss_pred HHHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 98 ~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~Iv~isS~~~~~~--- 174 (275)
T 4imr_A 98 TDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKMVARKWGRVVSIGSINQLRP--- 174 (275)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC---
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC---
Confidence 87774 79999999996432 223445668899999999999883 446679999999876442
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--ccc-e-eecccCcccCCccCHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THN-I-TLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~~~-~-~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...... ... . .........+.+..++|+|+
T Consensus 175 ---~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~ 251 (275)
T 4imr_A 175 ---KSVVTAYAATKAAQHNLIQSQARDFAGDNVLLNTLAPGLVDTDRNADRRAQDPEGWDEYVRTLNWMGRAGRPEEMVG 251 (275)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHHHHHCHHHHHHHHHHHSTTCSCBCGGGGHH
T ss_pred ---CCCchhhHHHHHHHHHHHHHHHHHhcccCcEEEEEEeccccCcccccccccChHHHHHHHhhcCccCCCcCHHHHHH
Confidence 2344579999999998765 25899999999999887321100 000 0 00000113455788999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++++++.+.. ...|++++|.++
T Consensus 252 ~v~fL~s~~a~~itG~~i~vdGG 274 (275)
T 4imr_A 252 AALFLASEACSFMTGETIFLTGG 274 (275)
T ss_dssp HHHHHHSGGGTTCCSCEEEESSC
T ss_pred HHHHHcCcccCCCCCCEEEeCCC
Confidence 9999998653 356889988765
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-23 Score=203.53 Aligned_cols=207 Identities=18% Similarity=0.139 Sum_probs=155.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.+.. .....+.+|++|.+++
T Consensus 26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~------------------------~~~~~~~~Dv~~~~~~ 81 (266)
T 3uxy_A 26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGI------------------------AADLHLPGDLREAAYA 81 (266)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTS------------------------CCSEECCCCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH------------------------HhhhccCcCCCCHHHH
Confidence 5678999999999999999999999999999999987532 1224457999998887
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|+||||||.... +..+++..+++|+.|+.++++++ ++.+.++||++||......
T Consensus 82 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~-- 159 (266)
T 3uxy_A 82 DGLPGAVAAGLGRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRP-- 159 (266)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBC--
T ss_pred HHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCC--
Confidence 7665 489999999996532 23345566889999999999998 4556789999999876432
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce------eecccCcccCCccCHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI------TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~------~~~~~~~~~~~~v~~~ 286 (446)
......|+.+|..++.+.+ ..|+++++|+||+++++...... .... .........+.+.+++
T Consensus 160 ----~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 235 (266)
T 3uxy_A 160 ----GPGHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTGFAKRGFDPDRAVAELGRTVPLGRIAEPE 235 (266)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHHHHHTTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred ----CCCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhhhhcccccchHHHHHHHhcCCCCCCcCHH
Confidence 2345679999999998765 26899999999999987421100 0000 0011122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+|+++++++.+.. ...|++|++.++..
T Consensus 236 dvA~~v~~L~s~~~~~itG~~i~vdGG~~ 264 (266)
T 3uxy_A 236 DIADVVLFLASDAARYLCGSLVEVNGGKA 264 (266)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTCC
T ss_pred HHHHHHHHHhCchhcCCcCCEEEECcCEe
Confidence 99999999998753 34689999988754
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.90 E-value=2e-23 Score=201.05 Aligned_cols=206 Identities=13% Similarity=0.090 Sum_probs=153.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++ ..++.++.+|++|.+++
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------------------------~~~~~~~~~Dl~~~~~v 61 (264)
T 2dtx_A 6 LRDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------------------------EAKYDHIECDVTNPDQV 61 (264)
T ss_dssp GTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------------------------SCSSEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------------------------CCceEEEEecCCCHHHH
Confidence 456899999999999999999999999999999998753 15688999999999988
Q ss_pred HHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ ++|+||||||.... +..++...+++|+.++.++++++.. .+.++||++||..+....
T Consensus 62 ~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~- 140 (264)
T 2dtx_A 62 KASIDHIFKEYGSISVLVNNAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIIT- 140 (264)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCC-
Confidence 87764 79999999996432 2233456688999999999888854 466799999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh----CC--CCEEEEecCCccCCCccccc------cc----ce-eecccCcccCCcc
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA----SG--LPYTIVRPGGMERPTDAYKE------TH----NI-TLSQEDTLFGGQV 283 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~----~g--l~~tivRPg~v~gp~~~~~~------~~----~~-~~~~~~~~~~~~v 283 (446)
.....|+.+|..+|.+.+. .+ +++++|+||++.++...... .. .. .........+.++
T Consensus 141 -----~~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 215 (264)
T 2dtx_A 141 -----KNASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELEVGSDPMRIEKKISEWGHEHPMQRIG 215 (264)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHHHCSCHHHHHHHHHHHHHHSTTSSCB
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcccccCchhhHHHHHHHHhcCCCCCCc
Confidence 3456799999999988752 12 99999999999876321100 00 00 0000111235679
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+|+++++++.++. ...|++|++.++.
T Consensus 216 ~p~dvA~~v~~l~s~~~~~~tG~~i~vdGG~ 246 (264)
T 2dtx_A 216 KPQEVASAVAFLASREASFITGTCLYVDGGL 246 (264)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CHHHHHHHHHHHhCchhcCCCCcEEEECCCc
Confidence 99999999999997643 3468899887763
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-23 Score=195.97 Aligned_cols=208 Identities=17% Similarity=0.141 Sum_probs=151.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++++|||||+|+||+++++.|+++|++|++++|+.++.. ++ + ++.++.+|++| +++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~---~---------------~~~~~~~D~~~-~~~~~ 59 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA---QS---L---------------GAVPLPTDLEK-DDPKG 59 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---HH---H---------------TCEEEECCTTT-SCHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---Hh---h---------------CcEEEecCCch-HHHHH
Confidence 468999999999999999999999999999999986521 11 1 27788999999 87776
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||........
T Consensus 60 ~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~-- 137 (239)
T 2ekp_A 60 LVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGWGRVLFIGSVTTFTAGG-- 137 (239)
T ss_dssp HHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCCT--
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECchhhccCCC--
Confidence 64 479999999996432 223345668899999999988884 45678999999987643210
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccce-eecccCcccCCccCHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNI-TLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~-~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
..+...|+.+|...+.+.+ ..|+++++||||+++++...... .... .........+.+++++|+|++++
T Consensus 138 --~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~ 215 (239)
T 2ekp_A 138 --PVPIPAYTTAKTALLGLTRALAKEWARLGIRVNLLCPGYVETEFTLPLRQNPELYEPITARIPMGRWARPEEIARVAA 215 (239)
T ss_dssp --TSCCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred --CCCCccHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCccCchhhccccCHHHHHHHHhcCCCCCCcCHHHHHHHHH
Confidence 1345679999999998765 25999999999999987422110 0000 00001122345789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++.+.. ...|+++++.++.
T Consensus 216 ~l~s~~~~~~tG~~~~vdgG~ 236 (239)
T 2ekp_A 216 VLCGDEAEYLTGQAVAVDGGF 236 (239)
T ss_dssp HHTSGGGTTCCSCEEEESTTT
T ss_pred HHcCchhcCCCCCEEEECCCc
Confidence 9997642 3468889887763
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.1e-22 Score=197.69 Aligned_cols=204 Identities=13% Similarity=0.077 Sum_probs=150.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++... + ...+.++.+|++|.+++
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~Dv~d~~~v 98 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGR---------T---GNIVRAVVCDVGDPDQV 98 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------H---SSCEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C---CCeEEEEEcCCCCHHHH
Confidence 46789999999999999999999999999999999998888777666543 1 13468999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----CC--CCEEEEEccccccC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----AK--VNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~~--v~r~V~vSS~~~~~ 217 (446)
++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+ .++||++||.....
T Consensus 99 ~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~~~g~IV~isS~~~~~ 178 (281)
T 4dry_A 99 AALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRMMKAQTPRGGRIINNGSISAQT 178 (281)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSSCCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCcEEEEECCHHhCC
Confidence 8776 478999999996422 2233455788999999988887753 32 46999999987643
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
. ......|+.+|...+.+.+ ..|+++++|+||++.++........ ..........+.+++++|+|+
T Consensus 179 ~------~~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~-~~~~~~~~~~~~~~~pedvA~ 251 (281)
T 4dry_A 179 P------RPNSAPYTATKHAITGLTKSTALDGRMHDIACGQIDIGNAATDMTARMSTG-VLQANGEVAAEPTIPIEHIAE 251 (281)
T ss_dssp C------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEECBCC-------CE-EECTTSCEEECCCBCHHHHHH
T ss_pred C------CCCChhHHHHHHHHHHHHHHHHHHhcccCeEEEEEEECcCcChhhhhhcch-hhhhhhcccccCCCCHHHHHH
Confidence 2 2345679999999998765 3799999999999998742211110 111111223345789999999
Q ss_pred HHHHHHhCCC
Q 013273 291 LLACMAKNRS 300 (446)
Q Consensus 291 ai~~ll~~~~ 300 (446)
++++++.++.
T Consensus 252 ~v~fL~s~~~ 261 (281)
T 4dry_A 252 AVVYMASLPL 261 (281)
T ss_dssp HHHHHHHSCT
T ss_pred HHHHHhCCCc
Confidence 9999999876
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.2e-23 Score=195.46 Aligned_cols=191 Identities=17% Similarity=0.085 Sum_probs=145.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++||||||+|+||++++++|+++|++|++++|+.++.+.+.+++. .++.++.+|++|.++++
T Consensus 2 s~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~D~~~~~~v~ 65 (235)
T 3l6e_A 2 SLGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLG----------------NAVIGIVADLAHHEDVD 65 (235)
T ss_dssp -CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTSHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhc----------------CCceEEECCCCCHHHHH
Confidence 35789999999999999999999999999999999887776655431 35899999999999888
Q ss_pred HHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCch
Q 013273 159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++ +++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.......
T Consensus 66 ~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~~--- 142 (235)
T 3l6e_A 66 VAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRLIGERGGVLANVLSSAAQVGK--- 142 (235)
T ss_dssp HHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEECCEECCSSC---
T ss_pred HHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCEEEEEeCHHhcCCC---
Confidence 776 478999999996432 33345567899999999999988532 12399999997664322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++...... ......+++++|+|++++++
T Consensus 143 ---~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~~~~pedvA~~v~~l 210 (235)
T 3l6e_A 143 ---ANESLYCASKWGMRGFLESLRAELKDSPLRLVNLYPSGIRSEFWDNTD---------HVDPSGFMTPEDAAAYMLDA 210 (235)
T ss_dssp ---SSHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEEEEEECCCC--------------------CBCHHHHHHHHHHH
T ss_pred ---CCCcHHHHHHHHHHHHHHHHHHHhhccCCEEEEEeCCCccCcchhccC---------CCCCcCCCCHHHHHHHHHHH
Confidence 334679999999998765 26899999999999877321110 01123578999999999999
Q ss_pred HhCCC
Q 013273 296 AKNRS 300 (446)
Q Consensus 296 l~~~~ 300 (446)
+.++.
T Consensus 211 ~~~~~ 215 (235)
T 3l6e_A 211 LEARS 215 (235)
T ss_dssp TCCCS
T ss_pred HhCCC
Confidence 98654
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=6.1e-23 Score=198.32 Aligned_cols=195 Identities=16% Similarity=0.108 Sum_probs=151.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+.+++||||||+||||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.++
T Consensus 28 ~l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~ 94 (272)
T 1yb1_A 28 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---------G----AKVHTFVVDCSNRED 94 (272)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhc---------C----CeEEEEEeeCCCHHH
Confidence 356789999999999999999999999999999999988777766655432 1 579999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++++ ++|+||||||..... ..++...+++|+.++.++++++. +.+.++||++||..+...
T Consensus 95 v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~~~- 173 (272)
T 1yb1_A 95 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS- 173 (272)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred HHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCEEEEEechhhcCC-
Confidence 887763 789999999964321 22344568899999888877764 457789999999876332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHHh----------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALIA----------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~~----------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|...|.+++. .|+++++||||++.++.... .....+.+++++|+|
T Consensus 174 -----~~~~~~Y~~sK~a~~~l~~~la~e~~~~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~~dva 238 (272)
T 1yb1_A 174 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV 238 (272)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred -----CCCchhHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEeCCcccCCcccc----------ccccccCCCCHHHHH
Confidence 23456799999999877651 38999999999998774210 111234579999999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
++++.++.++.
T Consensus 239 ~~i~~~~~~~~ 249 (272)
T 1yb1_A 239 NRLMHGILTEQ 249 (272)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHcCC
Confidence 99999998775
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=3.8e-23 Score=198.46 Aligned_cols=203 Identities=16% Similarity=0.086 Sum_probs=153.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||||||+||||+++++.|++ .|++|++++|+.++...+.+.++.. + .++.++.+|++|.++
T Consensus 2 ~~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dl~~~~~ 68 (276)
T 1wma_A 2 SGIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---------G----LSPRFHQLDIDDLQS 68 (276)
T ss_dssp CCCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---------T----CCCEEEECCTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhc---------C----CeeEEEECCCCCHHH
Confidence 3568999999999999999999999 9999999999988777766655432 1 578999999999998
Q ss_pred HHHHhc-------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCC--C
Q 013273 157 IEPALG-------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKF--G 219 (446)
Q Consensus 157 ~~~a~~-------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~--~ 219 (446)
++++++ ++|+||||||..... ..+++..+++|+.++.++++++.... .++||++||..+... .
T Consensus 69 ~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~~sS~~~~~~~~~ 148 (276)
T 1wma_A 69 IRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKS 148 (276)
T ss_dssp HHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHhhCCCCEEEEECChhhhccccc
Confidence 888775 899999999965322 12344568899999999999998752 249999999755311 0
Q ss_pred --------------Cchhh-------------------hchhhHHHHHHHHHHHHHH-------h----CCCCEEEEecC
Q 013273 220 --------------FPAAI-------------------LNLFWGVLLWKRKAEEALI-------A----SGLPYTIVRPG 255 (446)
Q Consensus 220 --------------~~~~~-------------------~~~~~~Y~~sK~~~E~~l~-------~----~gl~~tivRPg 255 (446)
.+++. ..+...|+.+|...|.+++ . .|+++++|+||
T Consensus 149 ~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~~~~~~~~~~~i~v~~v~PG 228 (276)
T 1wma_A 149 CSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPG 228 (276)
T ss_dssp SCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECC
T ss_pred CChhHHhhccccccchhhhhhhhhhhhhhhcccccccCCCccchhHHHHHHHHHHHHHHHHHhhcccCCCceEEEEecCC
Confidence 00000 0133689999999987765 2 58999999999
Q ss_pred CccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC---CCCCcEEE
Q 013273 256 GMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS---LSYCKVVE 308 (446)
Q Consensus 256 ~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~---~~~~~v~n 308 (446)
++.++.... ..+++++|+|+++++++.++. ...|+.|+
T Consensus 229 ~v~t~~~~~---------------~~~~~~~~~a~~~~~l~~~~~~~~~~~G~~~~ 269 (276)
T 1wma_A 229 WVRTDMAGP---------------KATKSPEEGAETPVYLALLPPDAEGPHGQFVS 269 (276)
T ss_dssp SBCSTTTCT---------------TCSBCHHHHTHHHHHHHSCCTTCCCCCSCEEE
T ss_pred ccccCcCCc---------------cccCChhHhhhhHhhhhcCcccccccCceEec
Confidence 998874211 246899999999999998552 23455554
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=1e-22 Score=202.51 Aligned_cols=216 Identities=15% Similarity=0.068 Sum_probs=160.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~- 155 (446)
+.+++||||||+|+||+++++.|+++|++|++++ |+.++...+.+++... .+ .++.++.+|++|.+
T Consensus 44 l~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~d~~~ 111 (328)
T 2qhx_A 44 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--------RP----NSAITVQADLSNVAT 111 (328)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--------ST----TCEEEEECCCSSSCB
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhh--------cC----CeEEEEEeeCCCchh
Confidence 4678999999999999999999999999999999 9988777766655421 11 57899999999998
Q ss_pred ----------------cHHHHhc-------CCCEEEEcccCCCCc--------------------cCCCCCcccchHHHH
Q 013273 156 ----------------QIEPALG-------NASVVICCIGASEKE--------------------VFDITGPYRIDFQAT 192 (446)
Q Consensus 156 ----------------~~~~a~~-------~~D~VI~~Ag~~~~~--------------------~~~~~~~~~vNv~g~ 192 (446)
+++++++ ++|+||||||..... ..++...+++|+.++
T Consensus 112 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~vN~~g~ 191 (328)
T 2qhx_A 112 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAP 191 (328)
T ss_dssp CC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHHHHHHHHHHHHHTHHH
T ss_pred ccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHHHHH
Confidence 8877763 799999999964321 222345578999999
Q ss_pred HHHHHHHH----hCC------CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecC
Q 013273 193 KNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPG 255 (446)
Q Consensus 193 ~~l~~aa~----~~~------v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg 255 (446)
.++++++. +.+ .++||++||...... ......|+.+|..++.+.+ ..|+++++|+||
T Consensus 192 ~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG 265 (328)
T 2qhx_A 192 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQP------LLGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG 265 (328)
T ss_dssp HHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccC------CCCcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecC
Confidence 99998885 334 579999999876432 1345679999999998765 258999999999
Q ss_pred CccCCCcccccccceeecccCcccC-CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 256 GMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 256 ~v~gp~~~~~~~~~~~~~~~~~~~~-~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.++. ..... ...........+ .+.+++|+|+++++++.+.. ...|++|++.++.
T Consensus 266 ~v~T~~-~~~~~-~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 323 (328)
T 2qhx_A 266 LSVLVD-DMPPA-VWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 323 (328)
T ss_dssp SBSCCC-CSCHH-HHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cccCCc-cccHH-HHHHHHhhCCCCCCCCCHHHHHHHHHHHhCccccCccCcEEEECCCc
Confidence 999885 11100 000000112233 57899999999999997532 3468899887764
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.90 E-value=6.9e-23 Score=195.38 Aligned_cols=218 Identities=17% Similarity=0.141 Sum_probs=161.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|+.+++||||||+|+||+++++.|+++|++|+++ .|+.+....+.++++.. + .++.++.+|++|.+
T Consensus 4 ~l~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~D~~~~~ 70 (255)
T 3icc_A 4 MLKGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSN---------G----GSAFSIGANLESLH 70 (255)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHT---------T----CEEEEEECCTTSHH
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhc---------C----CceEEEecCcCCHH
Confidence 5678899999999999999999999999999886 56666666665555432 1 57899999999998
Q ss_pred cHHHHhc-------------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccc
Q 013273 156 QIEPALG-------------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~~-------------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~ 214 (446)
+++++++ .+|+||||||.... +..+++..+++|+.++.++++++... +.++||++||..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~ 150 (255)
T 3icc_A 71 GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAA 150 (255)
T ss_dssp HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGG
T ss_pred HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChh
Confidence 8877653 38999999996432 22234456789999999999999765 345899999987
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccCH
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSN 285 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~~ 285 (446)
.... ......|+.+|+..+.+.+ ..|+++++|+||++.++......... ..........+.+.++
T Consensus 151 ~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (255)
T 3icc_A 151 TRIS------LPDFIAYSMTKGAINTMTFTLAKQLGARGITVNAILPGFVKTDMNAELLSDPMMKQYATTISAFNRLGEV 224 (255)
T ss_dssp GTSC------CTTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCSSSTTTTTSHHHHHHHHHTSTTSSCBCH
T ss_pred hccC------CCCcchhHHhHHHHHHHHHHHHHHHHhcCeEEEEEEEeeecccchhhhcccHHHHHhhhccCCcCCCCCH
Confidence 6432 1335679999999998765 26999999999999987432111110 0111112234567899
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+|+++++++.+.. ...|+++++.++.
T Consensus 225 ~dva~~~~~l~s~~~~~~tG~~i~vdgG~ 253 (255)
T 3icc_A 225 EDIADTAAFLASPDSRWVTGQLIDVSGGS 253 (255)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESSST
T ss_pred HHHHHHHHHHhCcccCCccCCEEEecCCe
Confidence 999999999997542 3568999998774
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=195.28 Aligned_cols=219 Identities=13% Similarity=0.105 Sum_probs=159.9
Q ss_pred CCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~--IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+|+ ||+++++.|+++|++|++++|+....+.+.+..+.. ...++.++.+|++|.+
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~D~~~~~ 72 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTL------------DRNDSIILPCDVTNDA 72 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTS------------SSCCCEEEECCCSSSH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhc------------CCCCceEEeCCCCCHH
Confidence 56789999999987 999999999999999999999875554443333221 1137999999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
++++++ +++|+||||||.... +..++...+++|+.++.++++++... ..++||++||....
T Consensus 73 ~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 152 (266)
T 3oig_A 73 EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE 152 (266)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence 888776 478999999996531 12233455789999999999999765 23599999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc--ceeecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~--~~~~~~~~~~~~~~v~~~D 287 (446)
.. ......|+.+|+..+.+.+ ..|+++++|+||++.++........ ...........+.+.+++|
T Consensus 153 ~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~p~d 226 (266)
T 3oig_A 153 LV------MPNYNVMGVAKASLDASVKYLAADLGKENIRVNSISAGPIRTLSAKGISDFNSILKDIEERAPLRRTTTPEE 226 (266)
T ss_dssp SC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred cc------CCCcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccccccccccchHHHHHHHHhcCCCCCCCCHHH
Confidence 32 1345679999999998765 3689999999999998632211000 0000011122346789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+++++++.+.. ...|+++++.++..
T Consensus 227 va~~v~~l~s~~~~~~tG~~i~vdGG~~ 254 (266)
T 3oig_A 227 VGDTAAFLFSDMSRGITGENLHVDSGFH 254 (266)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHcCCchhcCcCCEEEECCCeE
Confidence 9999999998643 35689999987754
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.7e-23 Score=199.19 Aligned_cols=210 Identities=10% Similarity=0.043 Sum_probs=155.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-------hHHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-------RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-------~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
.++++++|||||+|+||+++++.|+++|++|++++|+.+ ....+.++++.. + .++.++.+
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~ 72 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEA---------G----GQALPIVG 72 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHH---------T----SEEEEEEC
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhc---------C----CcEEEEEC
Confidence 356789999999999999999999999999999999876 344444444432 2 57999999
Q ss_pred CCCChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEcc
Q 013273 150 DLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSS 212 (446)
Q Consensus 150 Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS 212 (446)
|++|.++++++++ ++|+||||||.... +..+++..+++|+.++.++++++... +.++||++||
T Consensus 73 Dv~~~~~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 152 (285)
T 3sc4_A 73 DIRDGDAVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHILTLSP 152 (285)
T ss_dssp CTTSHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECC
Confidence 9999998887763 89999999996532 22334556789999999999998654 5679999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCC-ccCCCcccccccceeecccCcccCCccC
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~-v~gp~~~~~~~~~~~~~~~~~~~~~~v~ 284 (446)
....... ......|+.+|+..+.+.+ ..|+++++|+||+ +.++.... ........+.+.+
T Consensus 153 ~~~~~~~-----~~~~~~Y~asKaal~~~~~~la~e~~~~gI~vn~v~PG~~v~t~~~~~-------~~~~~~~~~r~~~ 220 (285)
T 3sc4_A 153 PIRLEPK-----WLRPTPYMMAKYGMTLCALGIAEELRDAGIASNTLWPRTTVATAAVQN-------LLGGDEAMARSRK 220 (285)
T ss_dssp CCCCSGG-----GSCSHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECSSCBCCHHHHH-------HHTSCCCCTTCBC
T ss_pred hhhccCC-----CCCCchHHHHHHHHHHHHHHHHHHhcccCcEEEEEeCCCccccHHHHh-------hccccccccCCCC
Confidence 7653321 1234679999999998765 2789999999995 44331100 0011122446789
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEec
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~ 311 (446)
++|+|+++++++.++....|+++.+.+
T Consensus 221 pedvA~~~~~l~s~~~~~tG~~i~~dg 247 (285)
T 3sc4_A 221 PEVYADAAYVVLNKPSSYTGNTLLCED 247 (285)
T ss_dssp THHHHHHHHHHHTSCTTCCSCEEEHHH
T ss_pred HHHHHHHHHHHhCCcccccceEEEEcC
Confidence 999999999999887644566665544
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.4e-23 Score=198.51 Aligned_cols=216 Identities=13% Similarity=0.073 Sum_probs=156.2
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+ |+||+++++.|+++|++|++++|+.+ .....+++... . +++.++.+|++|.+
T Consensus 4 l~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~-~~~~~~~l~~~---------~----~~~~~~~~D~~~~~ 69 (275)
T 2pd4_A 4 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNES-LEKRVRPIAQE---------L----NSPYVYELDVSKEE 69 (275)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTT-THHHHHHHHHH---------T----TCCCEEECCTTCHH
T ss_pred CCCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHHHHh---------c----CCcEEEEcCCCCHH
Confidence 456899999999 99999999999999999999999876 33333333221 1 34789999999999
Q ss_pred cHHHHhc-------CCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEcccccc
Q 013273 156 QIEPALG-------NASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTN 216 (446)
Q Consensus 156 ~~~~a~~-------~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~ 216 (446)
+++++++ ++|+||||||.... +..+++..+++|+.++.++++++... ..++||++||.+..
T Consensus 70 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~ 149 (275)
T 2pd4_A 70 HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGST 149 (275)
T ss_dssp HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGT
T ss_pred HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEEecchhc
Confidence 8887763 78999999996431 22234556889999999999999765 12599999997663
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~~D 287 (446)
... .....|+.+|...+.+.+ ..|+++++|+||++.++....... .... ........+.+.+++|
T Consensus 150 ~~~------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~p~d 223 (275)
T 2pd4_A 150 KYM------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLEE 223 (275)
T ss_dssp SBC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHHH
T ss_pred CCC------CCchhhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCccccchhhhccccHHHHHHHHhcCCcCCCCCHHH
Confidence 321 334579999999998765 259999999999999874321100 0000 0000112345689999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++++.+.. ...|++|++.++.
T Consensus 224 va~~~~~l~s~~~~~~tG~~~~vdgg~ 250 (275)
T 2pd4_A 224 VGNAGMYLLSSLSSGVSGEVHFVDAGY 250 (275)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCccccCCCCCEEEECCCc
Confidence 9999999997532 2468888887763
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.3e-22 Score=199.04 Aligned_cols=206 Identities=16% Similarity=0.067 Sum_probs=148.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+||||+++++.|+++|++|++++|+.++...+.+.+... + ...++.++.+|++|.+++
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~---------~--~~~~~~~~~~Dl~~~~~v 74 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAE---------G--SGPEVMGVQLDVASREGF 74 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------T--CGGGEEEEECCTTCHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C--CCCeEEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999999888877766543 1 113799999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----------CCCEEEEEcccc
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~v~r~V~vSS~~ 214 (446)
++++ +++|+||||||.... +..++...+++|+.|+.++++++... +.++||++||..
T Consensus 75 ~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~iV~isS~a 154 (319)
T 3ioy_A 75 KMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRMVERVKAGEQKGGHVVNTASMA 154 (319)
T ss_dssp HHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTSCCCCEEEEECCGG
T ss_pred HHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHhhhccCCCCcEEEEecccc
Confidence 8876 367999999996432 22334556889999999999888532 356899999987
Q ss_pred ccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceee------------ccc
Q 013273 215 TNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITL------------SQE 275 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~------------~~~ 275 (446)
+.... .....|+.+|..++.+.+ ..|+++++|+||+|.++...........+ ...
T Consensus 155 ~~~~~------~~~~~Y~aSKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (319)
T 3ioy_A 155 AFLAA------GSPGIYNTTKFAVRGLSESLHYSLLKYEIGVSVLCPGLVKSYIYASDDIRPDALKGEVKPVDKTAVERL 228 (319)
T ss_dssp GTCCC------SSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCBC-----------------------------
T ss_pred cccCC------CCCHHHHHHHHHHHHHHHHHHHHhhhcCCEEEEEEcCeEccCcccccccCchhhcccccchhHHHHHHH
Confidence 64321 234579999997665543 36999999999999887422110000000 000
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCC
Q 013273 276 DTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 276 ~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.......++++|+|+.++.+++++.
T Consensus 229 ~~~~~~~~~pe~vA~~~~~al~~~~ 253 (319)
T 3ioy_A 229 AGVHEFGMEPDVIGARVIEAMKANR 253 (319)
T ss_dssp CCGGGSSBCHHHHHHHHHHHHHTTC
T ss_pred HHhhhcCCCHHHHHHHHHHHHHcCC
Confidence 0111122899999999999999865
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.89 E-value=1e-22 Score=194.53 Aligned_cols=199 Identities=15% Similarity=0.103 Sum_probs=150.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+.++.+.+.+++.... ....++.++.+|++|.+++
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~----------~~~~~~~~~~~Dv~~~~~v 74 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSN----------KHVQEPIVLPLDITDCTKA 74 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHC----------TTSCCCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhc----------cccCcceEEeccCCCHHHH
Confidence 457899999999999999999999999999999999988888777665430 0115789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc-----cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICCIGASEKE-----VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +++|+||||||..... ..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 75 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 152 (250)
T 3nyw_A 75 DTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIMKVQKNGYIFNVASRAAKYGF-- 152 (250)
T ss_dssp HHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECC---------
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEEccHHhcCCC--
Confidence 8776 4789999999964322 23345668899999999998884 3566799999997764321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.+...|+.+|...+.+.+ ..|+++++|+||++.++...... .....+.+++++|+|+++++
T Consensus 153 ----~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~--------~~~~~~~~~~p~dva~~v~~ 220 (250)
T 3nyw_A 153 ----ADGGIYGSTKFALLGLAESLYRELAPLGIRVTTLCPGWVNTDMAKKAG--------TPFKDEEMIQPDDLLNTIRC 220 (250)
T ss_dssp ----CCTTHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCSHHHHHTT--------CCSCGGGSBCHHHHHHHHHH
T ss_pred ----CCCcchHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCcccCchhhhcC--------CCcccccCCCHHHHHHHHHH
Confidence 225679999999987765 26899999999999876321100 11122457899999999999
Q ss_pred HHhCCC
Q 013273 295 MAKNRS 300 (446)
Q Consensus 295 ll~~~~ 300 (446)
++.++.
T Consensus 221 l~s~~~ 226 (250)
T 3nyw_A 221 LLNLSE 226 (250)
T ss_dssp HHTSCT
T ss_pred HHcCCC
Confidence 999765
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.6e-22 Score=194.15 Aligned_cols=201 Identities=13% Similarity=0.099 Sum_probs=151.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
...+++||||||+|+||++++++|+++| ++|++++|+.++...+.+ +... + .++.++.+|++|
T Consensus 18 ~~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~-l~~~---------~----~~~~~~~~Dl~~ 83 (267)
T 1sny_A 18 GSHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELED-LAKN---------H----SNIHILEIDLRN 83 (267)
T ss_dssp --CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHH-HHHH---------C----TTEEEEECCTTC
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHH-hhcc---------C----CceEEEEecCCC
Confidence 3567899999999999999999999999 999999999876554322 2211 1 579999999999
Q ss_pred hhcHHHHhc---------CCCEEEEcccCCC-C------ccCCCCCcccchHHHHHHHHHHHHhC----------C----
Q 013273 154 RVQIEPALG---------NASVVICCIGASE-K------EVFDITGPYRIDFQATKNLVDAATIA----------K---- 203 (446)
Q Consensus 154 ~~~~~~a~~---------~~D~VI~~Ag~~~-~------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~---- 203 (446)
.++++++++ ++|+||||||... . ...++...+++|+.++.++++++... +
T Consensus 84 ~~~v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~~~~ 163 (267)
T 1sny_A 84 FDAYDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGV 163 (267)
T ss_dssp GGGHHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSST
T ss_pred hHHHHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHHHHHHhhcccccccccccC
Confidence 999988875 7999999999654 1 12234456789999999999988543 2
Q ss_pred -CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeeccc
Q 013273 204 -VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQE 275 (446)
Q Consensus 204 -v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~ 275 (446)
.++||++||..+..... ...+...|+.+|...|.+++ ..|+++++||||++.++....
T Consensus 164 ~~~~iv~isS~~~~~~~~---~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~----------- 229 (267)
T 1sny_A 164 GRAAIINMSSILGSIQGN---TDGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMGGS----------- 229 (267)
T ss_dssp TTCEEEEECCGGGCSTTC---CSCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTTCT-----------
T ss_pred CCceEEEEecccccccCC---CCCCchHHHHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCCCC-----------
Confidence 47999999987643221 01245679999999998775 269999999999998763210
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCCC-CCCcEEEE
Q 013273 276 DTLFGGQVSNLQVAELLACMAKNRSL-SYCKVVEV 309 (446)
Q Consensus 276 ~~~~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~ni 309 (446)
..+++++|+|+.++.++.+... ..+..|++
T Consensus 230 ----~~~~~~~~~a~~~~~~~~~~~~~~~G~~~~~ 260 (267)
T 1sny_A 230 ----SAPLDVPTSTGQIVQTISKLGEKQNGGFVNY 260 (267)
T ss_dssp ----TCSBCHHHHHHHHHHHHHHCCGGGTTCEECT
T ss_pred ----CCCCCHHHHHHHHHHHHHhcCcCCCCcEEcc
Confidence 2468999999999999986542 34555544
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.89 E-value=5e-23 Score=198.98 Aligned_cols=214 Identities=14% Similarity=0.108 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++ + .++.++.+|++|.+++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~------------g----~~~~~~~~Dv~~~~~v 90 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI------------G----GGAVGIQADSANLAEL 90 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH------------C----TTCEEEECCTTCHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc------------C----CCeEEEEecCCCHHHH
Confidence 57899999999999999999999999999999999998877665443 2 5688999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
++++ +++|++|||||... .+.++|+..+++|+.++.++++++... .-+++|++||.......
T Consensus 91 ~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~~~~--- 167 (273)
T 4fgs_A 91 DRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGSTGT--- 167 (273)
T ss_dssp HHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGGSCC---
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhccCC---
Confidence 8775 57899999999643 233456777899999999999999654 23589999998664321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc------eeecccCcccCCccCHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN------ITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~------~~~~~~~~~~~~~v~~~Dv 288 (446)
.....|+.+|..++.+.+ .+||+++.|.||++.++..... .... ..........+.+..++||
T Consensus 168 ---~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~PlgR~g~peei 244 (273)
T 4fgs_A 168 ---PAFSVYAASKAALRSFARNWILDLKDRGIRINTLSPGPTETTGLVELAGKDPVQQQGLLNALAAQVPMGRVGRAEEV 244 (273)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEEEECSBCC---------CHHHHHHHHHHHHHHSTTSSCBCHHHH
T ss_pred ---CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHhhccCchhhHHHHHHHHhcCCCCCCcCHHHH
Confidence 234579999999998876 3789999999999988742110 0000 0000112234567899999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+++++|+.+.. ...|+++.|-++.
T Consensus 245 A~~v~FLaSd~a~~iTG~~i~VDGG~ 270 (273)
T 4fgs_A 245 AAAALFLASDDSSFVTGAELFVDGGS 270 (273)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHhCchhcCccCCeEeECcCh
Confidence 999999997643 3578888887664
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.4e-22 Score=198.04 Aligned_cols=216 Identities=15% Similarity=0.063 Sum_probs=159.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~- 155 (446)
+.++++|||||+|+||+++++.|+++|++|++++ |+.++...+.++++.. .+ .++.++.+|++|.+
T Consensus 7 l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~~~~~ 74 (291)
T 1e7w_A 7 PTVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNAR--------RP----NSAITVQADLSNVAT 74 (291)
T ss_dssp -CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH--------ST----TCEEEEECCCSSSCB
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHhhh--------cC----CeeEEEEeecCCccc
Confidence 5678999999999999999999999999999999 9988777766655421 12 57999999999998
Q ss_pred ----------------cHHHHh-------cCCCEEEEcccCCCCc--------------------cCCCCCcccchHHHH
Q 013273 156 ----------------QIEPAL-------GNASVVICCIGASEKE--------------------VFDITGPYRIDFQAT 192 (446)
Q Consensus 156 ----------------~~~~a~-------~~~D~VI~~Ag~~~~~--------------------~~~~~~~~~vNv~g~ 192 (446)
++++++ +++|+||||||..... ..++...+++|+.++
T Consensus 75 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 154 (291)
T 1e7w_A 75 APVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAP 154 (291)
T ss_dssp CCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHH
T ss_pred ccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCccccccccccccccHHHHHHHHHHHhHHH
Confidence 887776 3799999999964321 223345678999999
Q ss_pred HHHHHHHH----hCC------CCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecC
Q 013273 193 KNLVDAAT----IAK------VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPG 255 (446)
Q Consensus 193 ~~l~~aa~----~~~------v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg 255 (446)
.++++++. +.+ .++||++||....... .....|+.+|...+.+.+ ..|+++++|+||
T Consensus 155 ~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG 228 (291)
T 1e7w_A 155 YFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPG 228 (291)
T ss_dssp HHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEES
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCC------CCCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeC
Confidence 99998885 334 5799999998764321 345679999999987765 368999999999
Q ss_pred CccCCCcccccccceeecccCcccC-CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 256 GMERPTDAYKETHNITLSQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 256 ~v~gp~~~~~~~~~~~~~~~~~~~~-~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.++. .. ..............+ .+.+++|+|+++++++.+.. ...|+++++.++.
T Consensus 229 ~v~T~~-~~-~~~~~~~~~~~~p~~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdGG~ 286 (291)
T 1e7w_A 229 LSVLVD-DM-PPAVWEGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 286 (291)
T ss_dssp SBCCGG-GS-CHHHHHHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred CccCCc-cC-CHHHHHHHHhhCCCCCCCCCHHHHHHHHHHHhCCcccCccCcEEEECCCc
Confidence 998774 21 000000000112233 57899999999999997543 3468888887764
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=197.58 Aligned_cols=217 Identities=11% Similarity=0.110 Sum_probs=158.5
Q ss_pred CCCCCEEEEECCCcH--HHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGK--VGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~--IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++++++||||||+|+ ||+++++.|+++|++|++++|+. ..+..+++... .+++.++.+|++|.
T Consensus 23 ~l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~--~~~~~~~l~~~-------------~~~~~~~~~Dl~~~ 87 (280)
T 3nrc_A 23 FLAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQ--FKDRVEKLCAE-------------FNPAAVLPCDVISD 87 (280)
T ss_dssp TTTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTT--CHHHHHHHHGG-------------GCCSEEEECCTTCH
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCch--HHHHHHHHHHh-------------cCCceEEEeecCCH
Confidence 456789999999955 99999999999999999999987 22222222211 14689999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCC-----------CccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASE-----------KEVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSL 213 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~-----------~~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~ 213 (446)
+++++++ +++|+||||||... .+..++...+++|+.++.++++++... ..++||++||.
T Consensus 88 ~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g~iv~isS~ 167 (280)
T 3nrc_A 88 QEIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAKEGRSMMKNRNASMVALTYI 167 (280)
T ss_dssp HHHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECG
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecc
Confidence 9888776 46899999999653 222334556889999999999998643 35699999998
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccC
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVS 284 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~ 284 (446)
..... ......|+.+|...+.+.+ ..|+++++|+||++.++......... ..........+.+.+
T Consensus 168 ~~~~~------~~~~~~Y~asKaal~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~~~~~ 241 (280)
T 3nrc_A 168 GAEKA------MPSYNTMGVAKASLEATVRYTALALGEDGIKVNAVSAGPIKTLAASGISNFKKMLDYNAMVSPLKKNVD 241 (280)
T ss_dssp GGTSC------CTTTHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCCCCSGGGGCTTHHHHHHHHHHHSTTCSCCC
T ss_pred ccccC------CCCchhhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeccccchhhhcCcchHHHHHHHHhcCCCCCCCC
Confidence 76433 2345679999999998765 37899999999999987432111000 000011122456789
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++|+|+++++++.+.. ...|+++++.++..
T Consensus 242 pedvA~~v~~l~s~~~~~~tG~~i~vdgG~~ 272 (280)
T 3nrc_A 242 IMEVGNTVAFLCSDMATGITGEVVHVDAGYH 272 (280)
T ss_dssp HHHHHHHHHHTTSGGGTTCCSCEEEESTTGG
T ss_pred HHHHHHHHHHHhCcccCCcCCcEEEECCCcc
Confidence 9999999999997642 35789999988753
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.2e-22 Score=193.02 Aligned_cols=212 Identities=15% Similarity=0.148 Sum_probs=149.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++...+.++++.. + .++.++.+|++|.+++
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~v 69 (260)
T 2qq5_A 3 MNGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSL---------G----GQCVPVVCDSSQESEV 69 (260)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------S----SEEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHc---------C----CceEEEECCCCCHHHH
Confidence 45689999999999999999999999999999999988877766665442 1 5789999999999887
Q ss_pred HHHh--------cCCCEEEEcccC--C------C-----CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcc
Q 013273 158 EPAL--------GNASVVICCIGA--S------E-----KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~--------~~~D~VI~~Ag~--~------~-----~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS 212 (446)
++++ +++|+||||||. . . .+..+++..+++|+.++.++.+++. +.+.++||++||
T Consensus 70 ~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~g~iv~isS 149 (260)
T 2qq5_A 70 RSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYFCSVYGARLMVPAGQGLIVVISS 149 (260)
T ss_dssp HHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHHHHHHHHHHHGGGTCCEEEEECC
T ss_pred HHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHHHHHHHHHHHhhcCCcEEEEEcC
Confidence 7654 467999999952 1 1 1222334567889999988877764 456689999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-ccccee----ecccCcccC
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNIT----LSQEDTLFG 280 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~----~~~~~~~~~ 280 (446)
...... .+...|+.+|...+.+.+ ..|+++++|+||++.++..... ...... ........+
T Consensus 150 ~~~~~~-------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (260)
T 2qq5_A 150 PGSLQY-------MFNVPYGVGKAACDKLAADCAHELRRHGVSCVSLWPGIVQTELLKEHMAKEEVLQDPVLKQFKSAFS 222 (260)
T ss_dssp GGGTSC-------CSSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCCSCTTTC----------------------C
T ss_pred hhhcCC-------CCCCchHHHHHHHHHHHHHHHHHhccCCeEEEEEecCccccHHHHHhhccccccchhHHHHHHhhhc
Confidence 876432 134579999999998865 3699999999999988742110 000000 000001122
Q ss_pred CccCHHHHHHHHHHHHhCCC--CCCCcEEEE
Q 013273 281 GQVSNLQVAELLACMAKNRS--LSYCKVVEV 309 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~--~~~~~v~ni 309 (446)
....++|+|+++++++.++. ...|+++.+
T Consensus 223 ~~~~pe~va~~v~~l~s~~~~~~itG~~i~~ 253 (260)
T 2qq5_A 223 SAETTELSGKCVVALATDPNILSLSGKVLPS 253 (260)
T ss_dssp HHHHHHHHHHHHHHHHTCTTGGGGTTCEEEH
T ss_pred cCCCHHHHHHHHHHHhcCcccccccceeech
Confidence 24678999999999998764 124555543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=6.7e-23 Score=195.74 Aligned_cols=213 Identities=15% Similarity=0.055 Sum_probs=152.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-h
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~ 155 (446)
+++++|+||||+||||++++++|+++|++ |++++|+... . ..+++... ....++.++.+|++|. +
T Consensus 3 l~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~-~-~~~~l~~~-----------~~~~~~~~~~~D~~~~~~ 69 (254)
T 1sby_A 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENP-T-ALAELKAI-----------NPKVNITFHTYDVTVPVA 69 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCH-H-HHHHHHHH-----------CTTSEEEEEECCTTSCHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchH-H-HHHHHHHh-----------CCCceEEEEEEecCCChH
Confidence 45689999999999999999999999997 9999998742 1 11222221 0114789999999998 7
Q ss_pred cHHHHh-------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC----C---CCEEEEEccccccCCCCc
Q 013273 156 QIEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA----K---VNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~----~---v~r~V~vSS~~~~~~~~~ 221 (446)
++++++ +++|+||||||... ..+++..+++|+.++.++++++... + .++||++||..+....
T Consensus 70 ~~~~~~~~~~~~~g~id~lv~~Ag~~~--~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~-- 145 (254)
T 1sby_A 70 ESKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNAI-- 145 (254)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccCC--HHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhhccCC--
Confidence 777766 38999999999742 3456677899999999999998642 1 3689999998764321
Q ss_pred hhhhchhhHHHHHHHHHHHHHHh-------CCCCEEEEecCCccCCCcccccccceeec--ccCcccCCccCHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALIA-------SGLPYTIVRPGGMERPTDAYKETHNITLS--QEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~-------~gl~~tivRPg~v~gp~~~~~~~~~~~~~--~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+..|.+.+. .|+++++|+||++.++............. ..........+++|+|+++
T Consensus 146 ----~~~~~Y~~sK~a~~~~~~~la~~~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~i 221 (254)
T 1sby_A 146 ----HQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNF 221 (254)
T ss_dssp ----TTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHH
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhccCCeEEEEEecCCccCccccccchhhhhhHHHHHHHhcCCCCCHHHHHHHH
Confidence 3356799999999987652 69999999999999874211000000000 0000011235899999999
Q ss_pred HHHHhCCCCCCCcEEEEecCC
Q 013273 293 ACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~~~~~~v~ni~~~~ 313 (446)
+.++... ..+++|++.++.
T Consensus 222 ~~~~~~~--~~G~~~~v~gG~ 240 (254)
T 1sby_A 222 VKAIEAN--KNGAIWKLDLGT 240 (254)
T ss_dssp HHHHHHC--CTTCEEEEETTE
T ss_pred HHHHHcC--CCCCEEEEeCCc
Confidence 9999743 458899998873
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.1e-22 Score=193.33 Aligned_cols=215 Identities=13% Similarity=0.093 Sum_probs=160.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+... +..+.+++. | .++.++.+|++|.++
T Consensus 6 ~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~--~~~~~~~~~---------g----~~~~~~~~Dv~d~~~ 70 (247)
T 4hp8_A 6 SLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPD--ETLDIIAKD---------G----GNASALLIDFADPLA 70 (247)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCH--HHHHHHHHT---------T----CCEEEEECCTTSTTT
T ss_pred CCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHH--HHHHHHHHh---------C----CcEEEEEccCCCHHH
Confidence 5788999999999999999999999999999999998642 233333332 2 678999999999999
Q ss_pred HHHHh--cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHHh----CC-CCEEEEEccccccCCCCchh
Q 013273 157 IEPAL--GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATI----AK-VNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 157 ~~~a~--~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~~----~~-v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++++ +++|++|||||... .+..+|+..+++|+.|+..+.+++.. .+ .++||++||.......
T Consensus 71 v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~~g~---- 146 (247)
T 4hp8_A 71 AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSFQGG---- 146 (247)
T ss_dssp TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhCCCC----
Confidence 88876 56899999999643 23445677799999999999987643 33 4699999998764322
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc--ceeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--NITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~--~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|..+|..+..+.+ .+||+++.|.||++.++........ ...........+.+..++|||+++++
T Consensus 147 --~~~~~Y~asKaav~~ltr~lA~Ela~~gIrVNaV~PG~i~T~~~~~~~~~~~~~~~~~~~~PlgR~g~peeiA~~v~f 224 (247)
T 4hp8_A 147 --IRVPSYTAAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVF 224 (247)
T ss_dssp --SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSGGGHHHHTSHHHHHHHHTTCTTSSCBCTHHHHHHHHH
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCcchhhcccCHHHHHHHHhCCCCCCCcCHHHHHHHHHH
Confidence 234579999999988866 3799999999999988742211000 00001122334567889999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
|+.+.. ...|+++.|-++
T Consensus 225 LaSd~a~~iTG~~i~VDGG 243 (247)
T 4hp8_A 225 LSSAAADYVHGAILNVDGG 243 (247)
T ss_dssp HTSGGGTTCCSCEEEESTT
T ss_pred HhCchhcCCcCCeEEECcc
Confidence 997653 346888888665
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=5.4e-23 Score=196.32 Aligned_cols=206 Identities=13% Similarity=0.153 Sum_probs=145.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++||||||+|+||+++++.|+++|++|++++|+.++.. . . +.+|++|.+++++
T Consensus 1 mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~--~-~~~Dl~~~~~v~~ 54 (257)
T 1fjh_A 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI-----------------------A--D-LSTAEGRKQAIAD 54 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE-----------------------C--C-TTSHHHHHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc-----------------------c--c-cccCCCCHHHHHH
Confidence 368999999999999999999999999999999875321 1 1 5689999999998
Q ss_pred Hhc----CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC----ch-----
Q 013273 160 ALG----NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF----PA----- 222 (446)
Q Consensus 160 a~~----~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~----~~----- 222 (446)
+++ ++|+||||||.... ...++..+++|+.++.++++++. +.+.++||++||..+..... ..
T Consensus 55 ~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~~~~~~~~~~~ 133 (257)
T 1fjh_A 55 VLAKCSKGMDGLVLCAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLALALEA 133 (257)
T ss_dssp HHTTCTTCCSEEEECCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHHHHHH
T ss_pred HHHHhCCCCCEEEECCCCCCC-cccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccccchhhhhhcc
Confidence 875 45999999997541 23356778999999999999885 45668999999987642100 00
Q ss_pred -------------hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc--eeecccCccc
Q 013273 223 -------------AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN--ITLSQEDTLF 279 (446)
Q Consensus 223 -------------~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~--~~~~~~~~~~ 279 (446)
....+...|+.+|...|.+++ ..|+++++|+||++.++..... .... ..........
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~ 213 (257)
T 1fjh_A 134 GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKFVPPM 213 (257)
T ss_dssp TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------CCCST
T ss_pred cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhhccchhHHHHHHhccccc
Confidence 112356689999999998775 2699999999999998743211 0000 0000001223
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+.+++++|+|+++++++.++. ...|++|++.++
T Consensus 214 ~~~~~~~dvA~~~~~l~~~~~~~~tG~~~~vdgG 247 (257)
T 1fjh_A 214 GRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp TSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCCHHHHHHHHHHHhCchhcCCcCCEEEECCC
Confidence 457899999999999997653 246888888776
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=192.50 Aligned_cols=217 Identities=12% Similarity=0.052 Sum_probs=158.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++|++|||||+++||+++++.|+++|++|++++|+.+....+ +++.+. + .++.++.+|++|.++
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~-~~~~~~---------~----~~~~~~~~Dv~~~~~ 69 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFL-DALAQR---------Q----PRATYLPVELQDDAQ 69 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHH-HHHHHH---------C----TTCEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHH-HHHHhc---------C----CCEEEEEeecCCHHH
Confidence 36789999999999999999999999999999999988765433 333322 2 678999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCc
Q 013273 157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++.+++..+ +-++||++||.......
T Consensus 70 v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~~~~-- 147 (258)
T 4gkb_A 70 CRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTAVTGQ-- 147 (258)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHHHHCC--
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhhccCC--
Confidence 87765 679999999996432 23345666889999999998887532 23699999998663321
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccce---ee--cccCcccC-CccCHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNI---TL--SQEDTLFG-GQVSNLQ 287 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~~---~~--~~~~~~~~-~~v~~~D 287 (446)
.....|+.+|..++.+.+ .+||+++.|.||++.++.... ...... .. .......+ .+..++|
T Consensus 148 ----~~~~~Y~asKaav~~ltr~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plg~R~g~pee 223 (258)
T 4gkb_A 148 ----GNTSGYCASKGAQLALTREWAVALREHGVRVNAVIPAEVMTPLYRNWIATFEDPEAKLAEIAAKVPLGRRFTTPDE 223 (258)
T ss_dssp ----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCSCC-----------CHHHHHHTTCTTTTSCBCHHH
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCChhHhhhhhcccChHHHHHHHHhcCCCCCCCcCHHH
Confidence 234579999999998876 379999999999998874211 100000 00 00111222 5678999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
||+++++|+.+.. ...|+++.|-++-
T Consensus 224 iA~~v~fLaS~~a~~iTG~~i~VDGG~ 250 (258)
T 4gkb_A 224 IADTAVFLLSPRASHTTGEWLFVDGGY 250 (258)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTT
T ss_pred HHHHHHHHhCchhcCccCCeEEECCCc
Confidence 9999999997643 3578899887764
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=99.89 E-value=8e-23 Score=192.42 Aligned_cols=191 Identities=14% Similarity=0.082 Sum_probs=141.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+++ ..++.++.+|++|.+++++
T Consensus 1 Mk~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~D~~~~~~v~~ 64 (230)
T 3guy_A 1 MSLIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCL----------------SNNVGYRARDLASHQEVEQ 64 (230)
T ss_dssp --CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTC----------------SSCCCEEECCTTCHHHHHH
T ss_pred CCEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH----------------hhccCeEeecCCCHHHHHH
Confidence 367999999999999999999999999999999988776654321 1578899999999999999
Q ss_pred HhcCC----CEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCchhhhc
Q 013273 160 ALGNA----SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 160 a~~~~----D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
+++.+ |+||||||.... +..+++..+++|+.++.++++++... ...+||++||...... ..
T Consensus 65 ~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~iv~isS~~~~~~------~~ 138 (230)
T 3guy_A 65 LFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKDQPVNVVMIMSTAAQQP------KA 138 (230)
T ss_dssp HHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCEEEEECCGGGTSC------CT
T ss_pred HHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeecccCCC------CC
Confidence 88654 999999996432 22334556889999999999988653 1239999999876432 23
Q ss_pred hhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCC
Q 013273 227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
....|+.+|+..+.+.+ ..|++++.|+||++.++..... ......+.+++++|+|+++++++.++
T Consensus 139 ~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~dvA~~i~~l~~~~ 210 (230)
T 3guy_A 139 QESTYCAVKWAVKGLIESVRLELKGKPMKIIAVYPGGMATEFWETS--------GKSLDTSSFMSAEDAALMIHGALANI 210 (230)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHTTTSSCEEEEEEECCC------------------------CCCHHHHHHHHHHHCCEE
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEECCcccChHHHhc--------CCCCCcccCCCHHHHHHHHHHHHhCc
Confidence 45679999999998765 2589999999999987732110 01112346799999999999999765
Q ss_pred C
Q 013273 300 S 300 (446)
Q Consensus 300 ~ 300 (446)
.
T Consensus 211 ~ 211 (230)
T 3guy_A 211 G 211 (230)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.1e-23 Score=198.23 Aligned_cols=206 Identities=13% Similarity=0.082 Sum_probs=154.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++++|||||+|+||+++++.|++ .|+.|++++|+... ....+.++.+|++|.+++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~-----------------------~~~~~~~~~~Dv~~~~~v 59 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSF-----------------------SAENLKFIKADLTKQQDI 59 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCC-----------------------CCTTEEEEECCTTCHHHH
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEecccccc-----------------------ccccceEEecCcCCHHHH
Confidence 467899999999999999999999 78999999987641 115689999999999999
Q ss_pred HHHhc-----CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC--CCEEEEEccccccCCCCchhh
Q 013273 158 EPALG-----NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK--VNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 ~~a~~-----~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~--v~r~V~vSS~~~~~~~~~~~~ 224 (446)
+++++ ++|+||||||.... +..+++..+++|+.++.++++++...- .++||++||.......
T Consensus 60 ~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~----- 134 (244)
T 4e4y_A 60 TNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLKVGASIVFNGSDQCFIAK----- 134 (244)
T ss_dssp HHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEEEEEEEEEECCGGGTCCC-----
T ss_pred HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhccCcEEEEECCHHHccCC-----
Confidence 98875 78999999996432 223345568999999999999997652 2489999998764321
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-----------ceeecccCcccCCccCHH
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-----------NITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-----------~~~~~~~~~~~~~~v~~~ 286 (446)
.....|+.+|+..+.+.+ ..|+++++|+||++.++........ ...........+.+.+++
T Consensus 135 -~~~~~Y~asKaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~ 213 (244)
T 4e4y_A 135 -PNSFAYTLSKGAIAQMTKSLALDLAKYQIRVNTVCPGTVDTDLYRNLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQ 213 (244)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEESCBCCHHHHHHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHH
T ss_pred -CCCchhHHHHHHHHHHHHHHHHHHHHcCeEEEEEecCccCchhhHHHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHH
Confidence 334579999999998875 3699999999999998732110000 000011122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++++.++. ...|+++++.++.
T Consensus 214 dvA~~v~~l~s~~~~~itG~~i~vdGG~ 241 (244)
T 4e4y_A 214 EIAELVIFLLSDKSKFMTGGLIPIDGGY 241 (244)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhcCccccccCCeEeECCCc
Confidence 99999999997643 3468899987763
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=99.89 E-value=3.6e-22 Score=191.62 Aligned_cols=218 Identities=13% Similarity=0.095 Sum_probs=160.2
Q ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++++|++|||||+| +||+++++.|+++|++|++.+|+++..+++.+.+++. ...++.++.+|++|.
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~------------~~~~~~~~~~Dv~~~ 70 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQL------------NQPEAHLYQIDVQSD 70 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGG------------TCSSCEEEECCTTCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc------------CCCcEEEEEccCCCH
Confidence 46789999999887 9999999999999999999999998888777666543 125789999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCCc----------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASEKE----------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~~----------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+++++++ +++|++|||||..... .+++...+++|+.+...+.+++... +.++||++||...
T Consensus 71 ~~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~ 150 (256)
T 4fs3_A 71 EEVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGG 150 (256)
T ss_dssp HHHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGG
T ss_pred HHHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 8887765 6799999999964221 1122334567888888888887653 3359999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|..++.+.+ .+||+++.|.||++.++......... ..........+.+..++
T Consensus 151 ~~~~------~~~~~Y~asKaal~~ltr~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~Pl~R~g~pe 224 (256)
T 4fs3_A 151 EFAV------QNYNVMGVAKASLEANVKYLALDLGPDNIRVNAISAGPIRTLSAKGVGGFNTILKEIKERAPLKRNVDQV 224 (256)
T ss_dssp TSCC------TTTHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCCCSGGGTTCTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccCc------ccchhhHHHHHHHHHHHHHHHHHhCccCeEEEEEecCCCCChhhhhccCCHHHHHHHHhcCCCCCCcCHH
Confidence 4332 334579999999987765 37999999999999876422111000 00001122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|||+++++|+.+.. ...|+++.|-++
T Consensus 225 evA~~v~fL~Sd~a~~iTG~~i~VDGG 251 (256)
T 4fs3_A 225 EVGKTAAYLLSDLSSGVTGENIHVDSG 251 (256)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHhCchhcCccCCEEEECcC
Confidence 99999999997643 346888888665
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=1.9e-22 Score=191.48 Aligned_cols=207 Identities=14% Similarity=0.054 Sum_probs=155.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC--CCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~ 154 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++.+.+.++++.. + ..++.++.+|+ .|.
T Consensus 11 ~l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~d~d~~~~ 78 (247)
T 3i1j_A 11 LLKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSA---------G---QPQPLIIALNLENATA 78 (247)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T---SCCCEEEECCTTTCCH
T ss_pred cCCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhc---------C---CCCceEEEeccccCCH
Confidence 467789999999999999999999999999999999998888877766543 1 14677888887 888
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN 216 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~ 216 (446)
+++++++ +++|+||||||.... +..++...+++|+.++.++++++. +.+.++||++||....
T Consensus 79 ~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~iv~isS~~~~ 158 (247)
T 3i1j_A 79 QQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLPLLKRSEDASIAFTSSSVGR 158 (247)
T ss_dssp HHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhCCCCeEEEEcchhhc
Confidence 8777665 489999999996421 223455668899999999999984 4566799999997664
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.. ......|+.+|...+.+.+ . .|+++++|+||++.++..... . .......+..++|+
T Consensus 159 ~~------~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~i~v~~v~PG~v~t~~~~~~------~--~~~~~~~~~~p~dv 224 (247)
T 3i1j_A 159 KG------RANWGAYGVSKFATEGLMQTLADELEGVTAVRANSINPGATRTGMRAQA------Y--PDENPLNNPAPEDI 224 (247)
T ss_dssp SC------CTTCHHHHHHHHHHHHHHHHHHHHHTTTSSEEEEEEECCCCSSHHHHHH------S--TTSCGGGSCCGGGG
T ss_pred CC------CCCcchhHHHHHHHHHHHHHHHHHhcCCCCeEEEEEecCcccCccchhc------c--cccCccCCCCHHHH
Confidence 32 2345679999999998765 2 589999999999987631110 0 01112245789999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEE
Q 013273 289 AELLACMAKNRS-LSYCKVVEV 309 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni 309 (446)
|+++++++.+.. ...|+++++
T Consensus 225 a~~~~~l~s~~~~~itG~~i~~ 246 (247)
T 3i1j_A 225 MPVYLYLMGPDSTGINGQALNA 246 (247)
T ss_dssp THHHHHHHSGGGTTCCSCEEEC
T ss_pred HHHHHHHhCchhccccCeeecC
Confidence 999999997543 245777664
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3e-22 Score=191.54 Aligned_cols=212 Identities=16% Similarity=0.086 Sum_probs=147.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH--
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI-- 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~-- 157 (446)
|++||||||+|+||+++++.|+++|++|++++|+.++.+.+.+ ++.. + .++.++ |..+.+.+
T Consensus 1 Mk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-l~~~---------~----~~~~~~--d~~~v~~~~~ 64 (254)
T 1zmt_A 1 MSTAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEA-FAET---------Y----PQLKPM--SEQEPAELIE 64 (254)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHH-HHHH---------C----TTSEEC--CCCSHHHHHH
T ss_pred CeEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HHhc---------C----CcEEEE--CHHHHHHHHH
Confidence 3689999999999999999999999999999999887766544 4322 1 234444 44443222
Q ss_pred --HHHhcCCCEEEEcccCC-CC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhh
Q 013273 158 --EPALGNASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 158 --~~a~~~~D~VI~~Ag~~-~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
.+.++++|+||||||.. .. +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 65 ~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~----- 139 (254)
T 1zmt_A 65 AVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW----- 139 (254)
T ss_dssp HHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC-----
T ss_pred HHHHHhCCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCC-----
Confidence 12235899999999965 21 222345568899999999988884 4466799999998764321
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccceee-------cccCcccCCccCHHHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHNITL-------SQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~-------~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|...+.+.+ ..|+++++|+||+++|+..... .+..... .......+.+.+++|+|
T Consensus 140 -~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~~T~~~~~~~~~~~~~~~~~p~~~~~~p~dvA 218 (254)
T 1zmt_A 140 -KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKELG 218 (254)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHHH
T ss_pred -CCchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccCCCcccccChHHHHHHhccCCCCCCcCHHHHH
Confidence 335679999999997765 2599999999999987743211 1110000 00011234578999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++++.+.. ...|+++++.++.
T Consensus 219 ~~v~~l~s~~~~~~tG~~~~vdgG~ 243 (254)
T 1zmt_A 219 ELVAFLASGSCDYLTGQVFWLAGGF 243 (254)
T ss_dssp HHHHHHHTTSCGGGTTCEEEESTTC
T ss_pred HHHHHHhCcccCCccCCEEEECCCc
Confidence 99999998754 3468899887774
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.88 E-value=2.9e-22 Score=192.58 Aligned_cols=221 Identities=14% Similarity=0.130 Sum_probs=160.7
Q ss_pred CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhH-HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 77 ~~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
...+++||||||+ |+||++++++|+++|++|++++|+.... ....+++... .+ .++.++.+|++|
T Consensus 17 ~l~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~--------~~----~~~~~~~~Dl~~ 84 (267)
T 3gdg_A 17 SLKGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKT--------YG----IKAKAYKCQVDS 84 (267)
T ss_dssp CCTTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHH--------HC----CCEECCBCCTTC
T ss_pred CcCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHh--------cC----CceeEEecCCCC
Confidence 3567899999999 9999999999999999999999887554 4444444321 11 579999999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEcccccc
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTN 216 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~ 216 (446)
.+++++++ +++|+||||||.... +..++...+++|+.++.++++++ ++.+.++||++||....
T Consensus 85 ~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 164 (267)
T 3gdg_A 85 YESCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHHFKERGTGSLVITASMSGH 164 (267)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHHHHHcCCceEEEEcccccc
Confidence 99888776 468999999996432 22334556889999999999988 44566799999997663
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.... ......|+.+|+..+.+.+. ..++++.|+||++.++...................+.+.+++|+|+
T Consensus 165 ~~~~----~~~~~~Y~~sK~a~~~~~~~la~e~~~~i~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~r~~~~~dva~ 240 (267)
T 3gdg_A 165 IANF----PQEQTSYNVAKAGCIHMARSLANEWRDFARVNSISPGYIDTGLSDFVPKETQQLWHSMIPMGRDGLAKELKG 240 (267)
T ss_dssp SCCS----SSCCHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEEECCEECSCGGGSCHHHHHHHHTTSTTSSCEETHHHHH
T ss_pred ccCC----CCCCCcchHHHHHHHHHHHHHHHHhccCcEEEEEECCccccchhhhCCHHHHHHHHhcCCCCCCcCHHHHHh
Confidence 3221 12456799999999988762 2389999999999877432111111111112233456788999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++++.+.. ...|+++++.++.
T Consensus 241 ~~~~l~s~~~~~itG~~i~vdgG~ 264 (267)
T 3gdg_A 241 AYVYFASDASTYTTGADLLIDGGY 264 (267)
T ss_dssp HHHHHHSTTCTTCCSCEEEESTTG
T ss_pred HhheeecCccccccCCEEEECCce
Confidence 9999997643 3468999997764
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=9.4e-23 Score=192.71 Aligned_cols=198 Identities=14% Similarity=0.066 Sum_probs=148.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++||||||+|+||+++++.|+++|++|++++|+.++.. ..+.++.+|++|.++++
T Consensus 2 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~~~ 58 (236)
T 1ooe_A 2 SSGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQ 58 (236)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc-----------------------cccEEEeCCCCCHHHHH
Confidence 3578999999999999999999999999999999875421 24677889999998887
Q ss_pred HHhc---------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC
Q 013273 159 PALG---------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 159 ~a~~---------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~ 220 (446)
++++ ++|+||||||.... ...+++..+++|+.++.++++++... ..++||++||......
T Consensus 59 ~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~-- 136 (236)
T 1ooe_A 59 SILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGP-- 136 (236)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC--
T ss_pred HHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhhccC--
Confidence 7663 79999999996432 12234556889999999999999764 2359999999876432
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
......|+.+|...+.+.+. .|+++++|+||+++++...... . ...+..+++++|+|++
T Consensus 137 ----~~~~~~Y~~sK~a~~~~~~~la~e~~~~~~gi~v~~v~Pg~v~t~~~~~~~------~--~~~~~~~~~~~dvA~~ 204 (236)
T 1ooe_A 137 ----TPSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRKWM------P--NADHSSWTPLSFISEH 204 (236)
T ss_dssp ----CTTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHHHS------T--TCCGGGCBCHHHHHHH
T ss_pred ----CCCcHHHHHHHHHHHHHHHHHHHHhcccCCCeEEEEEecCcccCcchhhcC------C--CccccccCCHHHHHHH
Confidence 23456799999999988752 3599999999999987321100 0 0112346889999999
Q ss_pred HHHHHhCCC--CCCCcEEEEecCC
Q 013273 292 LACMAKNRS--LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~--~~~~~v~ni~~~~ 313 (446)
++.++.++. ...|+++++.++.
T Consensus 205 i~~~l~s~~~~~~~G~~~~v~gg~ 228 (236)
T 1ooe_A 205 LLKWTTETSSRPSSGALLKITTEN 228 (236)
T ss_dssp HHHHHHCGGGCCCTTCEEEEEEET
T ss_pred HHHHHcCCCcccccccEEEEecCC
Confidence 997774332 2458899888765
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=3.4e-22 Score=194.24 Aligned_cols=214 Identities=14% Similarity=0.055 Sum_probs=155.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.++++|||||+|+||+++++.|+++|++|++++|+.++...+.+.+ ..++.++.+|++|.+++
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~Dv~~~~~v 66 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAH----------------GGNAVGVVGDVRSLQDQ 66 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT----------------BTTEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHc----------------CCcEEEEEcCCCCHHHH
Confidence 46789999999999999999999999999999999987766554321 15799999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc--c---------CCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEcccccc
Q 013273 158 EPAL-------GNASVVICCIGASEKE--V---------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN 216 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~--~---------~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~ 216 (446)
++++ +++|+||||||..... . .+++..+++|+.++.++++++... ..++||++||....
T Consensus 67 ~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~g~iv~isS~~~~ 146 (281)
T 3zv4_A 67 KRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVKACLPALVSSRGSVVFTISNAGF 146 (281)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGT
T ss_pred HHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCeEEEEecchhc
Confidence 7765 4789999999964211 1 123456789999999999988542 22699999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCcccccc--c-c-e------eecccCcccC
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAYKET--H-N-I------TLSQEDTLFG 280 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~~~~--~-~-~------~~~~~~~~~~ 280 (446)
... .....|+.+|+..+.+.+. ..++++.|+||++.++....... . . . .........+
T Consensus 147 ~~~------~~~~~Y~asKaa~~~l~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 220 (281)
T 3zv4_A 147 YPN------GGGPLYTATKHAVVGLVRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLADMLKSVLPIG 220 (281)
T ss_dssp SSS------SSCHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHHHHHHHTCTTS
T ss_pred cCC------CCCchhHHHHHHHHHHHHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHHHHHHhcCCCC
Confidence 322 3345799999999988762 34999999999998873211000 0 0 0 0001122345
Q ss_pred CccCHHHHHHHHHHHHhC-CC-CCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKN-RS-LSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~-~~-~~~~~v~ni~~~~ 313 (446)
.+.+++|+|+++++++.+ .. ...|+++++.++.
T Consensus 221 r~~~pedvA~~v~fL~s~~~~~~itG~~i~vdGG~ 255 (281)
T 3zv4_A 221 RMPALEEYTGAYVFFATRGDSLPATGALLNYDGGM 255 (281)
T ss_dssp SCCCGGGGSHHHHHHHSTTTSTTCSSCEEEESSSG
T ss_pred CCCCHHHHHHHHHHhhcccccccccCcEEEECCCC
Confidence 678999999999999983 32 2478999998774
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.88 E-value=3.2e-22 Score=191.10 Aligned_cols=198 Identities=12% Similarity=0.085 Sum_probs=151.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++||||||+|+||+++++.|+++|++|++++|+.++. ....+.+|++|.+++
T Consensus 20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~-------------------------~~~~~~~d~~d~~~v 74 (251)
T 3orf_A 20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPN-------------------------ADHSFTIKDSGEEEI 74 (251)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT-------------------------SSEEEECSCSSHHHH
T ss_pred ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccc-------------------------cccceEEEeCCHHHH
Confidence 3467999999999999999999999999999999987642 124578999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +++|+||||||.... ...++...+++|+.++.++++++... ..++||++||..+...
T Consensus 75 ~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~~~~--- 151 (251)
T 3orf_A 75 KSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAALNR--- 151 (251)
T ss_dssp HHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC---
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhhccC---
Confidence 8776 357999999996422 22334556889999999999999764 2248999999876432
Q ss_pred hhhhchhhHHHHHHHHHHHHHH----h-----CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI----A-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~----~-----~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...+.+.+ + .|+++++|+||++.++..... ......+.+++++|+|+++
T Consensus 152 ---~~~~~~Y~~sKaa~~~~~~~la~e~~~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~~dva~~i 220 (251)
T 3orf_A 152 ---TSGMIAYGATKAATHHIIKDLASENGGLPAGSTSLGILPVTLDTPTNRKY--------MSDANFDDWTPLSEVAEKL 220 (251)
T ss_dssp ---CTTBHHHHHHHHHHHHHHHHHTSTTSSSCTTCEEEEEEESCBCCHHHHHH--------CTTSCGGGSBCHHHHHHHH
T ss_pred ---CCCCchhHHHHHHHHHHHHHHHHHhcccCCCcEEEEEecCcCcCcchhhh--------cccccccccCCHHHHHHHH
Confidence 2345679999999998876 2 579999999999987632110 1112244678999999999
Q ss_pred HHHHhC-C-CCCCCcEEEEecCCC
Q 013273 293 ACMAKN-R-SLSYCKVVEVIAETT 314 (446)
Q Consensus 293 ~~ll~~-~-~~~~~~v~ni~~~~~ 314 (446)
++++.+ . ....|+++++.++..
T Consensus 221 ~~l~~~~~~~~~tG~~i~v~~g~~ 244 (251)
T 3orf_A 221 FEWSTNSDSRPTNGSLVKFETKSK 244 (251)
T ss_dssp HHHHHCGGGCCCTTCEEEEEEETT
T ss_pred HHHhcCccccCCcceEEEEecCCc
Confidence 999988 2 225789999988764
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-22 Score=192.04 Aligned_cols=201 Identities=12% Similarity=0.081 Sum_probs=150.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++||||||+|+||+++++.|+++|++|++++|+.++.. ....++.+|++|.++
T Consensus 4 ~~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~-----------------------~~~~~~~~D~~~~~~ 60 (241)
T 1dhr_A 4 SGEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQ 60 (241)
T ss_dssp --CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHH
T ss_pred cCCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc-----------------------CCcEEEEcCCCCHHH
Confidence 345689999999999999999999999999999999875421 246778899999988
Q ss_pred HHHHhc---------CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCC
Q 013273 157 IEPALG---------NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~~---------~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~ 218 (446)
++++++ ++|+||||||.... ...+++..+++|+.++.++++++... ..++||++||......
T Consensus 61 v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~ 140 (241)
T 1dhr_A 61 ADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDG 140 (241)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSC
T ss_pred HHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCEEEEECCHHHccC
Confidence 887763 78999999996432 12234556789999999999999764 2259999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++...... . ...+..+++++|+|
T Consensus 141 ------~~~~~~Y~asK~a~~~~~~~la~e~~~~~~gi~v~~v~PG~v~T~~~~~~~------~--~~~~~~~~~~~~vA 206 (241)
T 1dhr_A 141 ------TPGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKSM------P--EADFSSWTPLEFLV 206 (241)
T ss_dssp ------CTTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHHS------T--TSCGGGSEEHHHHH
T ss_pred ------CCCchHHHHHHHHHHHHHHHHHHHhccCCCCeEEEEEecCcccCccccccC------c--chhhccCCCHHHHH
Confidence 1345679999999998876 24699999999999876311100 0 01123457889999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+++++++.+.. ...|+++++.++..
T Consensus 207 ~~v~~l~~~~~~~~~G~~~~v~g~~~ 232 (241)
T 1dhr_A 207 ETFHDWITGNKRPNSGSLIQVVTTDG 232 (241)
T ss_dssp HHHHHHHTTTTCCCTTCEEEEEEETT
T ss_pred HHHHHHhcCCCcCccceEEEEeCCCC
Confidence 99999997653 24688898877653
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.88 E-value=1.2e-21 Score=196.13 Aligned_cols=206 Identities=12% Similarity=0.073 Sum_probs=152.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-------HHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
.+.+++||||||+|+||+++++.|+++|++|++++|+.++ ...+.++++.. + .++.++.+
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~---------g----~~~~~~~~ 108 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAV---------G----GKALPCIV 108 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHT---------T----CEEEEEEC
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhc---------C----CeEEEEEc
Confidence 4577899999999999999999999999999999998764 33444444332 2 57999999
Q ss_pred CCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcc
Q 013273 150 DLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSS 212 (446)
Q Consensus 150 Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS 212 (446)
|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||
T Consensus 109 Dv~d~~~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~g~IV~iSS 188 (346)
T 3kvo_A 109 DVRDEQQISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPYLKKSKVAHILNISP 188 (346)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTCSSCEEEEECC
T ss_pred cCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHCCCCEEEEECC
Confidence 999999888876 489999999996432 223345668999999999999984 446679999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH----h--CCCCEEEEecCC-ccCCCcccccccceeecccCcccCCccCH
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~--~gl~~tivRPg~-v~gp~~~~~~~~~~~~~~~~~~~~~~v~~ 285 (446)
....... .......|+.+|..++.+.+ + .|+++++|+||+ +..+... .+ ......+.+..+
T Consensus 189 ~~~~~~~----~~~~~~~Y~aSKaal~~l~~~la~e~~~gIrvn~v~PG~~i~T~~~~-------~~-~~~~~~~r~~~p 256 (346)
T 3kvo_A 189 PLNLNPV----WFKQHCAYTIAKYGMSMYVLGMAEEFKGEIAVNALWPKTAIHTAAMD-------ML-GGPGIESQCRKV 256 (346)
T ss_dssp CCCCCGG----GTSSSHHHHHHHHHHHHHHHHHHHHTTTTCEEEEEECSBCBCCHHHH-------HH-CC--CGGGCBCT
T ss_pred HHHcCCC----CCCCchHHHHHHHHHHHHHHHHHHHhcCCcEEEEEeCCCccccHHHH-------hh-ccccccccCCCH
Confidence 7653210 12345679999999987765 2 589999999996 5433110 00 111123456789
Q ss_pred HHHHHHHHHHHhCCCCCCCcEE
Q 013273 286 LQVAELLACMAKNRSLSYCKVV 307 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ 307 (446)
+|+|+++++++.+.....|+++
T Consensus 257 edvA~~v~~L~s~~~~itG~~i 278 (346)
T 3kvo_A 257 DIIADAAYSIFQKPKSFTGNFV 278 (346)
T ss_dssp HHHHHHHHHHHTSCTTCCSCEE
T ss_pred HHHHHHHHHHHhcCCCCCceEE
Confidence 9999999999988433456655
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=99.87 E-value=1.3e-21 Score=190.37 Aligned_cols=197 Identities=16% Similarity=0.143 Sum_probs=148.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+.+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... + ..++.++.+|++|.+++
T Consensus 26 ~~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~---------~---~~~~~~~~~Dl~d~~~v 93 (286)
T 1xu9_A 26 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL---------G---AASAHYIAGTMEDMTFA 93 (286)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH---------T---CSEEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh---------C---CCceEEEeCCCCCHHHH
Confidence 56789999999999999999999999999999999998877766655443 1 13689999999999888
Q ss_pred HHHh-------cCCCEEEEc-ccCCCCc-----cCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCCc
Q 013273 158 EPAL-------GNASVVICC-IGASEKE-----VFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~-Ag~~~~~-----~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~~ 221 (446)
++++ +++|+|||| +|..... ..++...+++|+.|+.++++++... +.++||++||..+...
T Consensus 94 ~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~g~iv~isS~~~~~~--- 170 (286)
T 1xu9_A 94 EQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVA--- 170 (286)
T ss_dssp HHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSC---
T ss_pred HHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHHHHCCCEEEEECCcccccC---
Confidence 7776 379999999 5643221 2223455789999999999888542 3469999999876432
Q ss_pred hhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
......|+.+|...|.+++ ..|+++++|+||++.++...... ........++++|+|+.+
T Consensus 171 ---~~~~~~Y~asK~a~~~~~~~l~~e~~~~~~~i~v~~v~Pg~v~t~~~~~~~--------~~~~~~~~~~~~~vA~~i 239 (286)
T 1xu9_A 171 ---YPMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMKAV--------SGIVHMQAAPKEECALEI 239 (286)
T ss_dssp ---CTTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHHHS--------CGGGGGGCBCHHHHHHHH
T ss_pred ---CCCccHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeecCccCChhHHHhc--------cccccCCCCCHHHHHHHH
Confidence 1345679999999887654 25899999999999876321000 011122468999999999
Q ss_pred HHHHhCCC
Q 013273 293 ACMAKNRS 300 (446)
Q Consensus 293 ~~ll~~~~ 300 (446)
+.++..+.
T Consensus 240 ~~~~~~~~ 247 (286)
T 1xu9_A 240 IKGGALRQ 247 (286)
T ss_dssp HHHHHTTC
T ss_pred HHHHhcCC
Confidence 99998764
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.8e-22 Score=190.50 Aligned_cols=202 Identities=17% Similarity=0.124 Sum_probs=134.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ- 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~- 156 (446)
+.+++||||||+|+||+++++.|++ |++|++++|+.++...+.+ ..++.++.+|+.|...
T Consensus 3 l~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~~------------------~~~~~~~~~D~~~~~~~ 63 (245)
T 3e9n_A 3 LKKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALAE------------------IEGVEPIESDIVKEVLE 63 (245)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHHT------------------STTEEEEECCHHHHHHT
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHHh------------------hcCCcceecccchHHHH
Confidence 4578999999999999999999988 9999999999877655421 1568999999988643
Q ss_pred --HHHH---hcCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 157 --IEPA---LGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 --~~~a---~~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+.+. ++++|+||||||.... +..++...+++|+.++.++++++. +.+ ++||++||..+...
T Consensus 64 ~~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~-g~iv~isS~~~~~~--- 139 (245)
T 3e9n_A 64 EGGVDKLKNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAAS-GCVIYINSGAGNGP--- 139 (245)
T ss_dssp SSSCGGGTTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEEC----------
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CeEEEEcCcccccC---
Confidence 2222 3578999999996432 223345668899999988888874 334 69999999876432
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
......|+.+|...+.+.+ ..|+++++|+||++.++....... ........+.+++++|+|+++++
T Consensus 140 ---~~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~----~~~~~~~~~~~~~p~dvA~~i~~ 212 (245)
T 3e9n_A 140 ---HPGNTIYAASKHALRGLADAFRKEEANNGIRVSTVSPGPTNTPMLQGLMD----SQGTNFRPEIYIEPKEIANAIRF 212 (245)
T ss_dssp ------CHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC--------------------CCGGGSCHHHHHHHHHH
T ss_pred ---CCCchHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCccCchhhhhhh----hhhcccccccCCCHHHHHHHHHH
Confidence 2345679999999998875 268999999999999874211100 00011122357899999999999
Q ss_pred HHhCCCCCCCcEEEEec
Q 013273 295 MAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~ 311 (446)
++.++. .++++|+.=
T Consensus 213 l~~~~~--~~~~~~i~~ 227 (245)
T 3e9n_A 213 VIDAGE--TTQITNVDV 227 (245)
T ss_dssp HHTSCT--TEEEEEEEE
T ss_pred HHcCCC--ccceeeeEE
Confidence 998875 467777653
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.3e-21 Score=186.48 Aligned_cols=205 Identities=13% Similarity=0.095 Sum_probs=149.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-------HHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-------AENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-------~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
.++++++|||||+|+||+++++.|+++|++|++++|+.++ ...+.+.++.. + .++.++.+
T Consensus 3 ~l~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~---------~----~~~~~~~~ 69 (274)
T 3e03_A 3 TLSGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAA---------G----GQGLALKC 69 (274)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHH---------T----SEEEEEEC
T ss_pred CCCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhc---------C----CeEEEEeC
Confidence 3567899999999999999999999999999999998764 34444433332 2 67999999
Q ss_pred CCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEcc
Q 013273 150 DLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSS 212 (446)
Q Consensus 150 Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS 212 (446)
|++|.+++++++ +++|+||||||.... +..+++..+++|+.++.++++++.. .+.++||++||
T Consensus 70 Dv~~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS 149 (274)
T 3e03_A 70 DIREEDQVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPHLLQAPNPHILTLAP 149 (274)
T ss_dssp CTTCHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHHHTTSSSCEEEECCC
T ss_pred CCCCHHHHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHHHHhcCCceEEEECC
Confidence 999999888776 479999999996432 2233455688999999999998853 45679999999
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCC-ccCCCcccccccceeecccCcccCCccC
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGG-MERPTDAYKETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~-v~gp~~~~~~~~~~~~~~~~~~~~~~v~ 284 (446)
...... ........|+.+|...+.+.+ ..|+++++|+||+ +.++.... .. ......+.+
T Consensus 150 ~~~~~~----~~~~~~~~Y~asKaal~~l~~~la~e~~~~gI~vn~v~PG~~v~T~~~~~-------~~--~~~~~~~~~ 216 (274)
T 3e03_A 150 PPSLNP----AWWGAHTGYTLAKMGMSLVTLGLAAEFGPQGVAINALWPRTVIATDAINM-------LP--GVDAAACRR 216 (274)
T ss_dssp CCCCCH----HHHHHCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECSBCBCC----------------CCCGGGSBC
T ss_pred hHhcCC----CCCCCCchHHHHHHHHHHHHHHHHHHhhhcCEEEEEEECCcccccchhhh-------cc--cccccccCC
Confidence 765321 012345679999999998765 3689999999995 54442110 00 111223678
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEE
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVV 307 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ 307 (446)
++|+|+++++++.+.. ...|+++
T Consensus 217 pedvA~~v~~l~s~~~~~itG~~i 240 (274)
T 3e03_A 217 PEIMADAAHAVLTREAAGFHGQFL 240 (274)
T ss_dssp THHHHHHHHHHHTSCCTTCCSCEE
T ss_pred HHHHHHHHHHHhCccccccCCeEE
Confidence 9999999999998754 2346665
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=4.6e-22 Score=190.61 Aligned_cols=215 Identities=13% Similarity=0.112 Sum_probs=155.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~---~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+.++++|||||+|+||+++++.|++ +|++|++++|+.++...+.++++.. ....++.++.+|++|.
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~ 72 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-----------QPDLKVVLAAADLGTE 72 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTSEEEEEECCTTSH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhh-----------CCCCeEEEEecCCCCH
Confidence 4568999999999999999999999 8999999999988877776665432 0015689999999999
Q ss_pred hcHHHHhc---------CCC--EEEEcccCCCC---------ccCCCCCcccchHHHHHHHHHHHHhC------CCCEEE
Q 013273 155 VQIEPALG---------NAS--VVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA------KVNHFI 208 (446)
Q Consensus 155 ~~~~~a~~---------~~D--~VI~~Ag~~~~---------~~~~~~~~~~vNv~g~~~l~~aa~~~------~v~r~V 208 (446)
++++++++ ++| +||||||.... +..+++..+++|+.++.++++++... +.++||
T Consensus 73 ~~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~g~iv 152 (259)
T 1oaa_A 73 AGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTVV 152 (259)
T ss_dssp HHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEEE
T ss_pred HHHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCceEE
Confidence 98887652 468 99999996421 22345566889999999999999653 335899
Q ss_pred EEccccccCCCCchhhhchhhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCccccc----ccce-eecccCcc
Q 013273 209 MVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----THNI-TLSQEDTL 278 (446)
Q Consensus 209 ~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~----~~~~-~~~~~~~~ 278 (446)
++||..+... ......|+.+|...+.+.+. .++++++|+||++.++...... .... ........
T Consensus 153 ~isS~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p 226 (259)
T 1oaa_A 153 NISSLCALQP------YKGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLKS 226 (259)
T ss_dssp EECCGGGTSC------CTTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHHH
T ss_pred EEcCchhcCC------CCCccHHHHHHHHHHHHHHHHHhhCCCceEEEecCCCcCcchHHHHhhccCChhHHHHHHHhhh
Confidence 9999876432 13456799999999988762 3599999999999876311100 0000 00000111
Q ss_pred cCCccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 279 FGGQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 279 ~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
.+.+.+++|+|+++++++.+.....|+++++
T Consensus 227 ~~~~~~p~dvA~~v~~l~~~~~~itG~~i~v 257 (259)
T 1oaa_A 227 DGALVDCGTSAQKLLGLLQKDTFQSGAHVDF 257 (259)
T ss_dssp TTCSBCHHHHHHHHHHHHHHCCSCTTEEEET
T ss_pred cCCcCCHHHHHHHHHHHHhhccccCCcEEec
Confidence 3457899999999999998644445666654
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=8.3e-22 Score=189.60 Aligned_cols=209 Identities=18% Similarity=0.134 Sum_probs=153.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+.... ..+..++++|++|.++
T Consensus 8 ~L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-----------------------~~~~~~~~~Dv~~~~~ 64 (261)
T 4h15_A 8 NLRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-----------------------LPEELFVEADLTTKEG 64 (261)
T ss_dssp CCTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-----------------------SCTTTEEECCTTSHHH
T ss_pred CCCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-----------------------CCcEEEEEcCCCCHHH
Confidence 46789999999999999999999999999999999976421 1334578999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC
Q 013273 157 IEPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~ 217 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++++++. +.+-++||++||.....
T Consensus 65 v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Iv~isS~~~~~ 144 (261)
T 4h15_A 65 CAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVPDMVARGSGVVVHVTSIQRVL 144 (261)
T ss_dssp HHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTS
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhchhhhhcCCceEEEEEehhhcc
Confidence 87765 578999999995321 223456678999999999888774 44667999999976633
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----ccc--------c-eeecccC
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETH--------N-ITLSQED 276 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~~~--------~-~~~~~~~ 276 (446)
... .....|+.+|..++.+.+ .+|++++.|.||++.++..... ... . +......
T Consensus 145 ~~~-----~~~~~Y~asKaal~~lt~~lA~Ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (261)
T 4h15_A 145 PLP-----ESTTAYAAAKAALSTYSKAMSKEVSPKGVRVVRVSPGWIETEASVRLAERLAKQAGTDLEGGKKIIMDGLGG 219 (261)
T ss_dssp CCT-----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTC
T ss_pred CCC-----CccHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEeCCCcCCcchhhhhHHHHHhhccchhhHHHHHHHHhcC
Confidence 211 124569999999987765 3799999999999987632110 000 0 0000112
Q ss_pred cccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 277 ~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
...+.+..++|||+++++|+.+.. ...|+++.|-++-
T Consensus 220 ~PlgR~g~peevA~~v~fLaS~~a~~itG~~i~VDGG~ 257 (261)
T 4h15_A 220 IPLGRPAKPEEVANLIAFLASDRAASITGAEYTIDGGT 257 (261)
T ss_dssp CTTSSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCccCcEEEECCcC
Confidence 334567899999999999997643 3468899887663
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.87 E-value=4.1e-22 Score=186.80 Aligned_cols=196 Identities=13% Similarity=0.104 Sum_probs=147.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++++|||||+|+||++++++|+++|++|++++|+.+ +|++|.+++
T Consensus 4 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~---------------------------------~D~~~~~~v 50 (223)
T 3uce_A 4 SDKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG---------------------------------LDISDEKSV 50 (223)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT---------------------------------CCTTCHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc---------------------------------cCCCCHHHH
Confidence 45679999999999999999999999999999998641 899999998
Q ss_pred HHHh---cCCCEEEEcccCCC-------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhh
Q 013273 158 EPAL---GNASVVICCIGASE-------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAIL 225 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~-------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~ 225 (446)
++++ +++|+||||||... .+..+++..+++|+.++.++++++... ..++||++||...... .
T Consensus 51 ~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~------~ 124 (223)
T 3uce_A 51 YHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKV------V 124 (223)
T ss_dssp HHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSC------C
T ss_pred HHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccC------C
Confidence 8877 47899999999642 122334556889999999999999765 2248999999876432 2
Q ss_pred chhhHHHHHHHHHHHHHH----h-CCCCEEEEecCCccCCCcccccccc----eeecccCcccCCccCHHHHHHHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALI----A-SGLPYTIVRPGGMERPTDAYKETHN----ITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~----~-~gl~~tivRPg~v~gp~~~~~~~~~----~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.....|+.+|...+.+.+ + ..+++++|+||++.++......... ..........+.+.+++|+|+++++++
T Consensus 125 ~~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~ 204 (223)
T 3uce_A 125 ANTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKGMNADDRDAMYQRTQSHLPVGKVGEASDIAMAYLFAI 204 (223)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTTSCHHHHHHHHHHHHHHSTTCSCBCHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhhcchhhHHHHHHHHhhcCCCCCccCHHHHHHHHHHHc
Confidence 345679999999998775 2 2399999999999987421110000 000011223456789999999999999
Q ss_pred hCCCCCCCcEEEEecCC
Q 013273 297 KNRSLSYCKVVEVIAET 313 (446)
Q Consensus 297 ~~~~~~~~~v~ni~~~~ 313 (446)
.+.. ..|++|++.++.
T Consensus 205 ~~~~-~tG~~i~vdgG~ 220 (223)
T 3uce_A 205 QNSY-MTGTVIDVDGGA 220 (223)
T ss_dssp HCTT-CCSCEEEESTTG
T ss_pred cCCC-CCCcEEEecCCe
Confidence 8654 578999998774
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.9e-21 Score=188.81 Aligned_cols=204 Identities=14% Similarity=0.090 Sum_probs=149.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-h
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-V 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~ 155 (446)
+..+++||||||+|+||+++++.|+++|++|++++|+.++...+.+++... ...++.++.+|++|. +
T Consensus 9 ~~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~------------~~~~~~~~~~Dl~~~~~ 76 (311)
T 3o26_A 9 VTKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNS------------NHENVVFHQLDVTDPIA 76 (311)
T ss_dssp ---CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT------------TCCSEEEEECCTTSCHH
T ss_pred cCCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhc------------CCCceEEEEccCCCcHH
Confidence 456789999999999999999999999999999999998887776666532 125799999999998 7
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------------------------------------ccCCCCCcccchHHHH
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------------------------------------EVFDITGPYRIDFQAT 192 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------------------------------------~~~~~~~~~~vNv~g~ 192 (446)
+++.++ +++|+||||||.... ...+++..+++|+.|+
T Consensus 77 ~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 156 (311)
T 3o26_A 77 TMSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQELMSETYELAEECLKINYNGV 156 (311)
T ss_dssp HHHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHHTTEECCHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchhcccccchhhhhhheeeeeehH
Confidence 766655 489999999997531 1112334478999999
Q ss_pred HHHHHHHH----hCCCCEEEEEccccccCCCCch-------------------------------------hhhchhhHH
Q 013273 193 KNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA-------------------------------------AILNLFWGV 231 (446)
Q Consensus 193 ~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~-------------------------------------~~~~~~~~Y 231 (446)
.++++++. +.+.+|||++||.......... ........|
T Consensus 157 ~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y 236 (311)
T 3o26_A 157 KSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNMLLKDFKENLIETNGWPSFGAAY 236 (311)
T ss_dssp HHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHTTCTTTTTCCSSCHHH
T ss_pred HHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHHHhhhhccccccccCcccchhh
Confidence 99998885 3456799999997653221000 001234679
Q ss_pred HHHHHHHHHHHHh-----CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcE
Q 013273 232 LLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV 306 (446)
Q Consensus 232 ~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v 306 (446)
+.+|+..+.+.+. .++++++|+||+|.++.... ......++.|+.++.++..+....++.
T Consensus 237 ~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~~~~~---------------~~~~~~~~~a~~~~~~~~~~~~~~~g~ 301 (311)
T 3o26_A 237 TTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTEMNYG---------------IGNYTAEEGAEHVVRIALFPDDGPSGF 301 (311)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSGGGTT---------------CCSBCHHHHHHHHHHHHTCCSSCCCSC
T ss_pred HHHHHHHHHHHHHHHhhcCCceEEEecCCceecCCcCC---------------CCCCCHHHHHHHHHHHHhCCCCCCCce
Confidence 9999999988762 46999999999998763110 123689999999999988665333333
Q ss_pred E
Q 013273 307 V 307 (446)
Q Consensus 307 ~ 307 (446)
|
T Consensus 302 ~ 302 (311)
T 3o26_A 302 F 302 (311)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=99.85 E-value=2e-21 Score=187.35 Aligned_cols=212 Identities=11% Similarity=0.074 Sum_probs=152.8
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhH-HHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA-ENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~-~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+.+++|||||| +|+||+++++.|+++|++|++++|+.++. +.+.++ ...++.++.+|++|.
T Consensus 5 l~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~----------------~~~~~~~~~~Dv~~~ 68 (269)
T 2h7i_A 5 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDR----------------LPAKAPLLELDVQNE 68 (269)
T ss_dssp TTTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTT----------------SSSCCCEEECCTTCH
T ss_pred cCCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHh----------------cCCCceEEEccCCCH
Confidence 45689999999 99999999999999999999999987652 332210 014688999999999
Q ss_pred hcHHHHhc----------CCCEEEEcccCCCC-----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEc
Q 013273 155 VQIEPALG----------NASVVICCIGASEK-----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVS 211 (446)
Q Consensus 155 ~~~~~a~~----------~~D~VI~~Ag~~~~-----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vS 211 (446)
++++++++ ++|+||||||.... +..++...+++|+.++.++++++... ..++||++|
T Consensus 69 ~~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~is 148 (269)
T 2h7i_A 69 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 148 (269)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHhhccCCeEEEEc
Confidence 98887764 89999999996431 12234456789999999999999754 125999999
Q ss_pred cccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c---ccc-------e-ee
Q 013273 212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E---THN-------I-TL 272 (446)
Q Consensus 212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~---~~~-------~-~~ 272 (446)
|.+. .+ ......|+.+|...+.+.+ ..|+++++|+||++.++..... . ... . ..
T Consensus 149 s~~~--~~-----~~~~~~Y~asKaa~~~l~~~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (269)
T 2h7i_A 149 FDPS--RA-----MPAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEG 221 (269)
T ss_dssp CCCS--SC-----CTTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHH
T ss_pred Cccc--cc-----cCchHHHHHHHHHHHHHHHHHHHHhcccCcEEEEEecCcccchhhhccccccchhhHHHHHHHHHHh
Confidence 9765 22 1234679999999987765 2699999999999987621100 0 000 0 00
Q ss_pred cccCcccC-CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 273 SQEDTLFG-GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 273 ~~~~~~~~-~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
.......+ .+..++|+|+++++++.+.. ...|+++++.++
T Consensus 222 ~~~~~p~~rr~~~p~dvA~~v~~L~s~~~~~itG~~i~vdGG 263 (269)
T 2h7i_A 222 WDQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGG 263 (269)
T ss_dssp HHHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTT
T ss_pred hhccCCcccCCCCHHHHHHHHHHHhCchhccCcceEEEecCC
Confidence 00111233 46889999999999998643 346888888766
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=99.85 E-value=1.8e-21 Score=184.97 Aligned_cols=208 Identities=13% Similarity=0.017 Sum_probs=142.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEE-E--cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAG-V--RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~-~--R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|||||+|+||+++++.|+++|++|+++ + |+.++...+.+++ .+.++. |..+.+.
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~-----------------~~~~~~--~~~~v~~ 61 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESEN-----------------PGTIAL--AEQKPER 61 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHS-----------------TTEEEC--CCCCGGG
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHh-----------------CCCccc--CHHHHHH
Confidence 3689999999999999999999999999999 6 9887766554322 012222 4333322
Q ss_pred HHH----HhcCCCEEEEcccCCCC---------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEP----ALGNASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~----a~~~~D~VI~~Ag~~~~---------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+.+ .++++|+||||||.... +..+++..+++|+.++.++++++. +.+.++||++||.......
T Consensus 62 ~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~ 141 (244)
T 1zmo_A 62 LVDATLQHGEAIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPL 141 (244)
T ss_dssp HHHHHGGGSSCEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHcCCCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCC
Confidence 221 12478999999996432 112345568899999999988885 4566799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCc---ccccccceee-ccc-CcccCCccCHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTD---AYKETHNITL-SQE-DTLFGGQVSNLQ 287 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~---~~~~~~~~~~-~~~-~~~~~~~v~~~D 287 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++.. .......... ... ....+.+.+++|
T Consensus 142 ------~~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pe~ 215 (244)
T 1zmo_A 142 ------AYNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYFPTSDWENNPELRERVDRDVPLGRLGRPDE 215 (244)
T ss_dssp ------TTCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTBCHHHHHHCHHHHHHHHHHCTTCSCBCHHH
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCcccccccccchHHHHHHHhcCCCCCCCcCHHH
Confidence 234579999999998765 2689999999999988742 1100000000 000 122345789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|+++++++.+.. ...|+++.+.++
T Consensus 216 vA~~v~~l~s~~~~~~tG~~i~vdgG 241 (244)
T 1zmo_A 216 MGALITFLASRRAAPIVGQFFAFTGG 241 (244)
T ss_dssp HHHHHHHHHTTTTGGGTTCEEEESTT
T ss_pred HHHHHHHHcCccccCccCCEEEeCCC
Confidence 9999999998754 245888888765
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.7e-20 Score=194.26 Aligned_cols=214 Identities=15% Similarity=0.087 Sum_probs=153.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++|||||+|+||+++++.|+++|++|++++|+... ..+.+..+. .++.++.+|++|.+++
T Consensus 211 l~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~-~~l~~~~~~---------------~~~~~~~~Dvtd~~~v 274 (454)
T 3u0b_A 211 LDGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAA-EDLKRVADK---------------VGGTALTLDVTADDAV 274 (454)
T ss_dssp TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGH-HHHHHHHHH---------------HTCEEEECCTTSTTHH
T ss_pred CCCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccH-HHHHHHHHH---------------cCCeEEEEecCCHHHH
Confidence 467899999999999999999999999999999997532 222222222 2467899999999988
Q ss_pred HHHhc-------C-CCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC----CCCEEEEEccccccCCC
Q 013273 158 EPALG-------N-ASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA----KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~~-------~-~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~----~v~r~V~vSS~~~~~~~ 219 (446)
+++++ + +|+||||||.... +..+++..+++|+.|+.++.+++... +.++||++||.......
T Consensus 275 ~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~g~iV~iSS~a~~~g~ 354 (454)
T 3u0b_A 275 DKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGNGTIGEGGRVIGLSSMAGIAGN 354 (454)
T ss_dssp HHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHTTSSCTTCEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCEEEEEeChHhCCCC
Confidence 87762 4 9999999997532 22334566889999999999999865 66799999997653221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|...+.+.+ ..|+++++|+||++.++...................+....++|+|+++
T Consensus 355 ------~g~~~YaasKaal~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~l~r~g~pedvA~~v 428 (454)
T 3u0b_A 355 ------RGQTNYATTKAGMIGLAEALAPVLADKGITINAVAPGFIETKMTEAIPLATREVGRRLNSLFQGGQPVDVAELI 428 (454)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSBCC----------CHHHHHSBTTSSCBCHHHHHHHH
T ss_pred ------CCCHHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEcCcccChhhhhcchhhHHHHHhhccccCCCCHHHHHHHH
Confidence 335679999998877654 3799999999999988742211100000011112233457899999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++.+.. ...|+++++.++.
T Consensus 429 ~fL~s~~a~~itG~~i~vdGG~ 450 (454)
T 3u0b_A 429 AYFASPASNAVTGNTIRVCGQA 450 (454)
T ss_dssp HHHHCGGGTTCCSCEEEESSSB
T ss_pred HHHhCCccCCCCCcEEEECCcc
Confidence 99997543 3568899987764
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=99.84 E-value=2.5e-21 Score=192.37 Aligned_cols=208 Identities=12% Similarity=0.074 Sum_probs=143.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++||||||+|+||+++++.|+++|++|++++|+......+.+.++...- ......++.++.+|++|.+++++
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~Dv~d~~~v~~ 74 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARA-------LACPPGSLETLQLDVRDSKSVAA 74 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHH-------TTCCTTSEEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHHHhhh-------ccCCCCceEEEEecCCCHHHHHH
Confidence 46899999999999999999999999999988876544333333322100 00112578999999999999999
Q ss_pred Hhc-----CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCCCchhh
Q 013273 160 ALG-----NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 160 a~~-----~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
+++ ++|+||||||.... +..++...+++|+.++.++++++ ++.+.++||++||.......
T Consensus 75 ~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~~~g~IV~isS~~~~~~~----- 149 (327)
T 1jtv_A 75 ARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL----- 149 (327)
T ss_dssp HHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC-----
T ss_pred HHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCEEEEECCcccccCC-----
Confidence 885 48999999996432 22334566889999999999986 34567899999998764321
Q ss_pred hchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc-ceeecc-c--------------CcccCC
Q 013273 225 LNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH-NITLSQ-E--------------DTLFGG 281 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~-~~~~~~-~--------------~~~~~~ 281 (446)
.....|+.+|+.+|.+.+ ..|+++++|+||+|.++........ ...+.. . ...++.
T Consensus 150 -~~~~~Y~aSK~a~~~~~~~la~el~~~gI~v~~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (327)
T 1jtv_A 150 -PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQVFRE 228 (327)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCcccChHHhhhhhcchhhhccCCHHHHHHHHHHHHHHHHhhhh
Confidence 234579999999998765 2699999999999988742110000 000000 0 001112
Q ss_pred c-cCHHHHHHHHHHHHhCCC
Q 013273 282 Q-VSNLQVAELLACMAKNRS 300 (446)
Q Consensus 282 ~-v~~~DvA~ai~~ll~~~~ 300 (446)
+ ++++|+|+++++++.++.
T Consensus 229 ~~~~pedvA~~i~~l~~~~~ 248 (327)
T 1jtv_A 229 AAQNPEEVAEVFLTALRAPK 248 (327)
T ss_dssp HCBCHHHHHHHHHHHHHCSS
T ss_pred cCCCHHHHHHHHHHHHcCCC
Confidence 2 589999999999998753
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.1e-20 Score=186.97 Aligned_cols=203 Identities=16% Similarity=0.094 Sum_probs=147.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEE---------cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGV---------RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~---------R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+.+++||||||+|+||+++++.|+++|++|++++ |+.++.+.+.++++.. + . .+.
T Consensus 7 l~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~---------~----~---~~~ 70 (319)
T 1gz6_A 7 FDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRR---------G----G---KAV 70 (319)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHT---------T----C---EEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhh---------C----C---eEE
Confidence 5678999999999999999999999999999964 4666666665555432 1 1 134
Q ss_pred cCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEc
Q 013273 149 CDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVS 211 (446)
Q Consensus 149 ~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vS 211 (446)
+|+.|.+++++++ +++|+||||||.... +..+++..+++|+.|+.++++++. +.+.+|||++|
T Consensus 71 ~D~~~~~~~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~grIV~vs 150 (319)
T 1gz6_A 71 ANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTA 150 (319)
T ss_dssp EECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EeCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 7999988776654 579999999996432 223355668899999999988873 45667999999
Q ss_pred cccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccC
Q 013273 212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~ 284 (446)
|....... .....|+.+|+..+.+.+ ..|+++++|+||++ ++... . . .. .....+++
T Consensus 151 S~~~~~~~------~~~~~Y~aSK~a~~~~~~~la~el~~~gI~vn~v~PG~~-t~~~~---~--~-~~---~~~~~~~~ 214 (319)
T 1gz6_A 151 SASGIYGN------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAG-SRMTE---T--V-MP---EDLVEALK 214 (319)
T ss_dssp CHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECC-STTTG---G--G-SC---HHHHHHSC
T ss_pred ChhhccCC------CCCHHHHHHHHHHHHHHHHHHHHhcccCEEEEEEeCCCc-ccccc---c--c-CC---hhhhccCC
Confidence 97542211 235679999999987765 26899999999987 33110 0 0 00 01113478
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
++|+|+++++++.++....|++|++.++
T Consensus 215 p~dvA~~~~~l~s~~~~~tG~~~~v~GG 242 (319)
T 1gz6_A 215 PEYVAPLVLWLCHESCEENGGLFEVGAG 242 (319)
T ss_dssp GGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCchhhcCCCEEEECCC
Confidence 9999999999998755456888888765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=8.5e-20 Score=190.61 Aligned_cols=200 Identities=20% Similarity=0.180 Sum_probs=147.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCch---hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~---~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+++||||||+|+||+++++.|+++|++ |++++|+.. ...++.++++.. | .++.++.+|++|
T Consensus 224 ~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---------g----~~v~~~~~Dv~d 290 (486)
T 2fr1_A 224 KPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---------G----ARTTVAACDVTD 290 (486)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhc---------C----CEEEEEEeCCCC
Confidence 45689999999999999999999999985 999999875 334444444332 2 578999999999
Q ss_pred hhcHHHHhcCC------CEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc
Q 013273 154 RVQIEPALGNA------SVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 154 ~~~~~~a~~~~------D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
.+++.++++.+ |+||||||.... +..++...+++|+.|+.+|.+++.+.+.++||++||.......
T Consensus 291 ~~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~V~~SS~a~~~g~-- 368 (486)
T 2fr1_A 291 RESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA-- 368 (486)
T ss_dssp HHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC--
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcChHhcCCC--
Confidence 99999988654 999999996532 2223445678899999999999998888999999997543221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 222 AAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.....|+.+|...+.+.+ ..|+++++|+||.+++.+........ .+. .....+++++|+++++..++.+
T Consensus 369 ----~g~~~Yaaaka~l~~la~~~~~~gi~v~~i~pG~~~~~gm~~~~~~~-~~~---~~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 369 ----PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVAD-RFR---RHGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp ----TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CT---TTTEECBCHHHHHHHHHHHHHT
T ss_pred ----CCCHHHHHHHHHHHHHHHHHHhcCCeEEEEECCeeCCCcccchhHHH-HHH---hcCCCCCCHHHHHHHHHHHHhC
Confidence 234579999999887654 58999999999999876432111000 000 1111469999999999999987
Q ss_pred CC
Q 013273 299 RS 300 (446)
Q Consensus 299 ~~ 300 (446)
+.
T Consensus 441 ~~ 442 (486)
T 2fr1_A 441 AE 442 (486)
T ss_dssp TC
T ss_pred CC
Confidence 65
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=3e-19 Score=187.39 Aligned_cols=200 Identities=16% Similarity=0.112 Sum_probs=148.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchh---HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+++||||||+|+||+++++.|+++|+ +|++++|+... ..++.++++.. | .++.++.+|++|
T Consensus 257 ~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~---------g----~~v~~~~~Dvtd 323 (511)
T 2z5l_A 257 QPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGH---------G----CEVVHAACDVAE 323 (511)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTT---------T----CEEEEEECCSSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhc---------C----CEEEEEEeCCCC
Confidence 4568999999999999999999999998 59999998743 34444444321 2 579999999999
Q ss_pred hhcHHHHhcC--CCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCCchhh
Q 013273 154 RVQIEPALGN--ASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 154 ~~~~~~a~~~--~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~~~~~ 224 (446)
.++++++++. +|+||||||..... ..++...+++|+.|+.+|.+++... +.++||++||.......
T Consensus 324 ~~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~~V~~SS~a~~~g~----- 398 (511)
T 2z5l_A 324 RDALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDAFVLFSSVTGTWGN----- 398 (511)
T ss_dssp HHHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCCEEEEEEGGGTTCC-----
T ss_pred HHHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeCHHhcCCC-----
Confidence 9999999854 99999999965432 1233455788999999999998776 78899999997553221
Q ss_pred hchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 225 LNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.....|+.+|...|.+.+ ..|+++++|+||.+.+.+........ .+. .....+++++|+++++..++.++.
T Consensus 399 -~g~~~YaaaKa~ld~la~~~~~~gi~v~sv~pG~~~~tgm~~~~~~~-~~~---~~g~~~l~~e~~a~~l~~al~~~~ 472 (511)
T 2z5l_A 399 -AGQGAYAAANAALDALAERRRAAGLPATSVAWGLWGGGGMAAGAGEE-SLS---RRGLRAMDPDAAVDALLGAMGRND 472 (511)
T ss_dssp -TTBHHHHHHHHHHHHHHHHHHTTTCCCEEEEECCBCSTTCCCCHHHH-HHH---HHTBCCBCHHHHHHHHHHHHHHTC
T ss_pred -CCCHHHHHHHHHHHHHHHHHHHcCCcEEEEECCcccCCcccccccHH-HHH---hcCCCCCCHHHHHHHHHHHHhCCC
Confidence 234679999999998765 58999999999988433221100000 000 111246999999999999998765
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=99.78 E-value=5.6e-19 Score=189.48 Aligned_cols=204 Identities=15% Similarity=0.115 Sum_probs=142.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc---------CchhHHHHHHHHHHhhhcccccccCCCCCCceEEE
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR---------SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV 147 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R---------~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v 147 (446)
.++++++|||||+|+||+++++.|+++|++|++++| +....+.+.++++.. + .. +
T Consensus 16 ~l~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~---------~----~~---~ 79 (613)
T 3oml_A 16 RYDGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKA---------G----GE---A 79 (613)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHT---------T----CC---E
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHh---------C----Ce---E
Confidence 467889999999999999999999999999999988 555666665555432 1 12 2
Q ss_pred EcCCCChhcHHHHhc-------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEE
Q 013273 148 ECDLEKRVQIEPALG-------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMV 210 (446)
Q Consensus 148 ~~Dl~d~~~~~~a~~-------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~v 210 (446)
.+|+.|.++++++++ ++|+||||||.... +..+++..+++|+.|+.++++++ ++.+.++||++
T Consensus 80 ~~D~~d~~~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~g~IV~i 159 (613)
T 3oml_A 80 VADYNSVIDGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNYGRIIMT 159 (613)
T ss_dssp EECCCCGGGHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEE
T ss_pred EEEeCCHHHHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 479999988887763 68999999996532 22345566889999999999988 45566799999
Q ss_pred ccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCcc
Q 013273 211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV 283 (446)
Q Consensus 211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v 283 (446)
||....... .....|+.+|...+.+.+ ..|+++++|+||.+..-... . . .......+
T Consensus 160 sS~a~~~~~------~~~~~Y~asKaal~~lt~~la~e~~~~gI~vn~v~Pg~~t~~~~~------~-~---~~~~~~~~ 223 (613)
T 3oml_A 160 SSNSGIYGN------FGQVNYTAAKMGLIGLANTVAIEGARNNVLCNVIVPTAASRMTEG------I-L---PDILFNEL 223 (613)
T ss_dssp CCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC------CC------C-C---CHHHHTTC
T ss_pred CCHHHcCCC------CCChHHHHHHHHHHHHHHHHHHHhCccCeEEEEEECCCCChhhhh------c-c---chhhhhcC
Confidence 997653221 235679999999987765 36899999999975321100 0 0 01122346
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
.++|+|+++++++.+.....|++|++.++
T Consensus 224 ~pedvA~~v~~L~s~~~~~tG~~i~vdGG 252 (613)
T 3oml_A 224 KPKLIAPVVAYLCHESCEDNGSYIESAAG 252 (613)
T ss_dssp CGGGTHHHHHHTTSTTCCCCSCEEEEETT
T ss_pred CHHHHHHHHHHhcCCCcCCCceEEEECCC
Confidence 89999999999998765457888888765
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=99.78 E-value=1.2e-18 Score=181.77 Aligned_cols=199 Identities=18% Similarity=0.171 Sum_probs=148.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCch---hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~---~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++++|||||+|+||+++++.|+++|+ +|+++.|+.. ....+.++++.. | .++.++.+|++|.+
T Consensus 239 ~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~~~---------g----~~v~~~~~Dvtd~~ 305 (496)
T 3mje_A 239 HGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELEQL---------G----VRVTIAACDAADRE 305 (496)
T ss_dssp CSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTTCHH
T ss_pred CCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHHhc---------C----CeEEEEEccCCCHH
Confidence 47999999999999999999999998 7888899743 344555555432 2 57999999999999
Q ss_pred cHHHHhc------CCCEEEEcccCC-CC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCch
Q 013273 156 QIEPALG------NASVVICCIGAS-EK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 156 ~~~~a~~------~~D~VI~~Ag~~-~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++++++ .+|+||||||.. .. +..++...+++|+.|+.++.+++...+.++||++||.......
T Consensus 306 ~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~~~~~~iV~~SS~a~~~g~--- 382 (496)
T 3mje_A 306 ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTADLDLDAFVLFSSGAAVWGS--- 382 (496)
T ss_dssp HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTTSCCSEEEEEEEHHHHTTC---
T ss_pred HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhccCCCEEEEEeChHhcCCC---
Confidence 9999884 479999999975 22 1122345688999999999999998888999999997653321
Q ss_pred hhhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCC
Q 013273 223 AILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
.....|+.+|...+.+.+ ..|+++++|+||.+.+.+........-.+... ....+..+++++++..++..+
T Consensus 383 ---~g~~~YaAaKa~ldala~~~~~~Gi~v~sV~pG~w~~~gm~~~~~~~~~l~~~---g~~~l~pe~~~~~l~~~l~~~ 456 (496)
T 3mje_A 383 ---GGQPGYAAANAYLDALAEHRRSLGLTASSVAWGTWGEVGMATDPEVHDRLVRQ---GVLAMEPEHALGALDQMLEND 456 (496)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHTTCCCEEEEECEESSSCC------CHHHHHT---TEEEECHHHHHHHHHHHHHHT
T ss_pred ---CCcHHHHHHHHHHHHHHHHHHhcCCeEEEEECCcccCCccccChHHHHHHHhc---CCCCCCHHHHHHHHHHHHcCC
Confidence 234679999999987765 58999999999988766432111000000000 012479999999999999876
Q ss_pred C
Q 013273 300 S 300 (446)
Q Consensus 300 ~ 300 (446)
.
T Consensus 457 ~ 457 (496)
T 3mje_A 457 D 457 (496)
T ss_dssp C
T ss_pred C
Confidence 5
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=99.77 E-value=3.4e-18 Score=166.98 Aligned_cols=229 Identities=11% Similarity=0.062 Sum_probs=143.0
Q ss_pred CCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC-----
Q 013273 78 KDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD----- 150 (446)
Q Consensus 78 ~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D----- 150 (446)
+.++++|||||+ |+||+++++.|+++|++|++++|++..... .......+++................+.+|
T Consensus 6 l~~k~~lVTGas~~~GIG~aia~~la~~G~~V~~~~r~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (297)
T 1d7o_A 6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIF-ETSLRRGKFDQSRVLPDGSLMEIKKVYPLDAVFDN 84 (297)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHH-HHHHHTTTTTGGGBCTTSSBCCEEEEEEECTTCCS
T ss_pred cCCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEeeccccchhh-hhhhhhhHhhhhhhhccccccccccccccceeccc
Confidence 456899999999 999999999999999999999986421100 000000000000000000000112344443
Q ss_pred ---CC----C--------hhcHHHHh-------cCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHHH
Q 013273 151 ---LE----K--------RVQIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAAT 200 (446)
Q Consensus 151 ---l~----d--------~~~~~~a~-------~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa~ 200 (446)
+. | .+++++++ +++|+||||||... .+..+++..+++|+.++.++++++.
T Consensus 85 ~~dv~~Dv~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 164 (297)
T 1d7o_A 85 PEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFL 164 (297)
T ss_dssp GGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHG
T ss_pred hhhhhhhhhccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 22 2 44555544 57999999998532 1223345668899999999999997
Q ss_pred hC--CCCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCccccc-cc
Q 013273 201 IA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKE-TH 268 (446)
Q Consensus 201 ~~--~v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~-~~ 268 (446)
.. ..++||++||....... ... ..|+.+|...+.+.+ . .|+++++|+||+++++...... ..
T Consensus 165 ~~m~~~g~iv~isS~~~~~~~------~~~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~~~~~~ 238 (297)
T 1d7o_A 165 PIMNPGGASISLTYIASERII------PGYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID 238 (297)
T ss_dssp GGEEEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred HHhccCceEEEEeccccccCC------CCcchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhhccccH
Confidence 64 12599999997653321 122 369999999987754 1 6999999999999988532110 00
Q ss_pred ce-eecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 269 NI-TLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 269 ~~-~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.. .........+.+.+++|+|+++++++.+.. ...|+++++.++.
T Consensus 239 ~~~~~~~~~~p~~r~~~pedvA~~v~~l~s~~~~~itG~~i~vdgG~ 285 (297)
T 1d7o_A 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHhhccCCCCCCCCHHHHHHHHHHHhCccccCCCCCEEEECCCc
Confidence 00 000001123456899999999999987532 3468899987773
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=99.76 E-value=8.7e-18 Score=176.91 Aligned_cols=200 Identities=16% Similarity=0.062 Sum_probs=147.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEE-EcCc-------------hhHHHHHHHHHHhhhcccccccCCCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAG-VRSV-------------QRAENLVQSVKQMKLDGELANKGIQPVE 142 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~-~R~~-------------~~~~~l~~~~~~~~l~~~~~~~g~~~~~ 142 (446)
..++++|||||+|+||.++++.|+++|++ |+++ +|+. +....+.++++.. | .
T Consensus 249 ~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~---------g----~ 315 (525)
T 3qp9_A 249 QADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADL---------G----A 315 (525)
T ss_dssp CTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHH---------T----C
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhc---------C----C
Confidence 45689999999999999999999999987 5556 7874 3444555555443 2 5
Q ss_pred ceEEEEcCCCChhcHHHHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCC-----CC
Q 013273 143 MLELVECDLEKRVQIEPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAK-----VN 205 (446)
Q Consensus 143 ~v~~v~~Dl~d~~~~~~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~-----v~ 205 (446)
++.++.+|++|.+++++++. .+|+||||||.... +..++...+++|+.|+.+|.+++.... .+
T Consensus 316 ~v~~~~~Dvtd~~~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~~~~~~~~ 395 (525)
T 3qp9_A 316 TATVVTCDLTDAEAAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAAAAGGRPP 395 (525)
T ss_dssp EEEEEECCTTSHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC----CCC
T ss_pred EEEEEECCCCCHHHHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhccccccCCCCC
Confidence 79999999999999998875 46999999997532 222345568899999999999998765 78
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCc
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ 282 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
+||++||....... .....|+.+|...+.+.+ ..|+++++|+||.+.+... ........+. ......
T Consensus 396 ~iV~~SS~a~~~g~------~g~~~YaaaKa~l~~lA~~~~~~gi~v~sI~pG~~~tgm~-~~~~~~~~~~---~~g~~~ 465 (525)
T 3qp9_A 396 VLVLFSSVAAIWGG------AGQGAYAAGTAFLDALAGQHRADGPTVTSVAWSPWEGSRV-TEGATGERLR---RLGLRP 465 (525)
T ss_dssp EEEEEEEGGGTTCC------TTCHHHHHHHHHHHHHHTSCCSSCCEEEEEEECCBTTSGG-GSSHHHHHHH---HTTBCC
T ss_pred EEEEECCHHHcCCC------CCCHHHHHHHHHHHHHHHHHHhCCCCEEEEECCccccccc-cchhhHHHHH---hcCCCC
Confidence 99999998764322 234679999999998875 3799999999999943311 0000000000 011145
Q ss_pred cCHHHHHHHHHHHHhCCC
Q 013273 283 VSNLQVAELLACMAKNRS 300 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~ 300 (446)
+..+++++++..++.++.
T Consensus 466 l~pee~a~~l~~~l~~~~ 483 (525)
T 3qp9_A 466 LAPATALTALDTALGHGD 483 (525)
T ss_dssp BCHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhCCC
Confidence 899999999999998765
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=99.74 E-value=4.3e-18 Score=168.11 Aligned_cols=220 Identities=12% Similarity=0.075 Sum_probs=124.7
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCc-----------hhHHHH-----------HHHHHHhhhcccc
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSV-----------QRAENL-----------VQSVKQMKLDGEL 133 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~-----------~~~~~l-----------~~~~~~~~l~~~~ 133 (446)
+.++++||||| +|+||+++++.|+++|++|++++|++ ++.... .++++..
T Consensus 7 l~~k~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 80 (319)
T 2ptg_A 7 LRGKTAFVAGVADSNGYGWAICKLLRAAGARVLVGTWPPVYSIFKKGLESSRFEQDSFYAQEPSSKVAAEAAEK------ 80 (319)
T ss_dssp CTTCEEEEECCCCTTSHHHHHHHHHHHTTCEEEEEECHHHHHHHHC----------------------------------
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEEEeccccccchhhhhhhhhhhhhhhhhcchhhhHHHHhhhc------
Confidence 45689999999 89999999999999999999998753 111110 1111000
Q ss_pred cccCCCCCCceEEEEcCC------------CC--------hhcHHHHh-------cCCCEEEEcccCCC---C-----cc
Q 013273 134 ANKGIQPVEMLELVECDL------------EK--------RVQIEPAL-------GNASVVICCIGASE---K-----EV 178 (446)
Q Consensus 134 ~~~g~~~~~~v~~v~~Dl------------~d--------~~~~~~a~-------~~~D~VI~~Ag~~~---~-----~~ 178 (446)
+. ....+.++.+|+ +| .+++++++ +++|+||||||... . +.
T Consensus 81 ---~~-~~~~~~~~~~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~ 156 (319)
T 2ptg_A 81 ---PV-DLVFDKIYPLDAVFDTPQDVPPEVSSNKRYAGVGGFTISEVAEAVRADVGQIDILVHSLANGPEVTKPLLQTSR 156 (319)
T ss_dssp --------CCSEEEECCTTCCSGGGSCHHHHCC--CTTSCCCSHHHHHHHHHHHHSCEEEEEEEEECCSSSSSCGGGCCH
T ss_pred ---cc-cccccccccccccccccccccchhcccccccccCHHHHHHHHHHHHHHcCCCCEEEECCccCCCCCCccccCCH
Confidence 00 000134444443 22 33555544 57899999998532 1 22
Q ss_pred CCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHH-------h-CCC
Q 013273 179 FDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGL 247 (446)
Q Consensus 179 ~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl 247 (446)
.+++..+++|+.++.++++++... ..++||++||....... ... ..|+.+|+.++.+.+ . +|+
T Consensus 157 ~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~~gI 230 (319)
T 2ptg_A 157 KGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVI------PGYGGGMSSAKAALESDCRTLAFEAGRARAV 230 (319)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC------------------------THHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEecccccccc------CccchhhHHHHHHHHHHHHHHHHHhccccCe
Confidence 234556889999999999999764 12699999997653321 122 369999998887654 2 699
Q ss_pred CEEEEecCCccCCCcccccc--c-ce--ee---cccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 248 PYTIVRPGGMERPTDAYKET--H-NI--TL---SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 248 ~~tivRPg~v~gp~~~~~~~--~-~~--~~---~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|+||++.++....... . .. .. .......+.+..++|+|+++++++.+.. ...|+++.+.++.
T Consensus 231 rvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~~L~s~~~~~itG~~i~vdGG~ 305 (319)
T 2ptg_A 231 RVNCISAGPLKSRAASAIGKAGDKTFIDLAIDYSEANAPLQKELESDDVGRAALFLLSPLARAVTGATLYVDNGL 305 (319)
T ss_dssp EEEEEEECCCC-------------------------------CCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTC
T ss_pred eEEEEeeCCccChhhhhcccccchhhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCcccCCccCCEEEECCCc
Confidence 99999999998874211100 0 00 00 0011223456899999999999997632 3568889887764
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=99.74 E-value=3.6e-18 Score=168.44 Aligned_cols=222 Identities=13% Similarity=0.094 Sum_probs=141.5
Q ss_pred CCCCEEEEECC--CcHHHHHHHHHHHHCCCeEEEEEcCchhH-------HHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGA--TGKVGSRTVRELLKLGFRVRAGVRSVQRA-------ENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGa--tG~IG~~lv~~L~~~G~~V~~~~R~~~~~-------~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+.++++||||| +|+||+++++.|+++|++|++++|++... ....+.++.+ . .+. ....+.++.
T Consensus 7 l~gk~~lVTGa~~s~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~--~-----~~~-~~~~~~~~~ 78 (315)
T 2o2s_A 7 LRGQTAFVAGVADSHGYGWAIAKHLASAGARVALGTWPPVLGLFQKSLQSGRLDEDRKL--P-----DGS-LIEFAGVYP 78 (315)
T ss_dssp CTTCEEEEECCSSSSSHHHHHHHHHHTTTCEEEEEECHHHHHHHHHHHHHTTTHHHHBC--T-----TSC-BCCCSCEEE
T ss_pred CCCCEEEEeCCCCCCChHHHHHHHHHHCCCEEEEEecccccchhhhhhhhhhhhhhhhh--h-----ccc-ccccccccc
Confidence 45789999999 89999999999999999999999864210 0000011111 0 000 001134444
Q ss_pred cCC------------CC--------hhcHHHHh-------cCCCEEEEcccCCC---C-----ccCCCCCcccchHHHHH
Q 013273 149 CDL------------EK--------RVQIEPAL-------GNASVVICCIGASE---K-----EVFDITGPYRIDFQATK 193 (446)
Q Consensus 149 ~Dl------------~d--------~~~~~~a~-------~~~D~VI~~Ag~~~---~-----~~~~~~~~~~vNv~g~~ 193 (446)
+|+ +| .+++++++ +++|+||||||... . +..++...+++|+.++.
T Consensus 79 ~d~~~~~~~~~~~Dv~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~ 158 (315)
T 2o2s_A 79 LDAAFDKPEDVPQDIKDNKRYAGVDGYTIKEVAVKVKQDLGNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFV 158 (315)
T ss_dssp CCTTCSSTTSSCHHHHTCGGGSSCCCCSHHHHHHHHHHHHCSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHH
T ss_pred ccccccccchhhhhhhcccccccCCHHHHHHHHHHHHHhcCCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHH
Confidence 443 32 44555554 57999999999532 1 22234556889999999
Q ss_pred HHHHHHHhC--CCCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCc
Q 013273 194 NLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTD 262 (446)
Q Consensus 194 ~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~ 262 (446)
++++++... ..++||++||....... ... ..|+.+|+..+.+.+ . .|+++++|+||++.++..
T Consensus 159 ~l~~~~~~~m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~ 232 (315)
T 2o2s_A 159 SLLQHFGPIMNEGGSAVTLSYLAAERVV------PGYGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAA 232 (315)
T ss_dssp HHHHHHSTTEEEEEEEEEEEEGGGTSCC------TTCCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHH
T ss_pred HHHHHHHHHHhcCCEEEEEecccccccC------CCccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhh
Confidence 999999654 12699999997663321 112 369999999887754 2 699999999999987631
Q ss_pred ccccc-c--ce--ee---cccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 263 AYKET-H--NI--TL---SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 263 ~~~~~-~--~~--~~---~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
..... . .. .. .......+.+..++|+|+++++++.+.. ...|+++.+.++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~pedvA~~v~~L~s~~~~~itG~~i~vdGG~ 292 (315)
T 2o2s_A 233 SAIGKSGEKSFIDYAIDYSYNNAPLRRDLHSDDVGGAALFLLSPLARAVSGVTLYVDNGL 292 (315)
T ss_dssp HHTTCSSSSCHHHHHHHHHHHHSSSCCCCCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred hhccccccchhHHHHHHHHhccCCCCCCCCHHHHHHHHHHHhCchhccCcCCEEEECCCe
Confidence 11000 0 00 00 0001123456899999999999997532 3468888887663
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=99.74 E-value=1.9e-17 Score=164.28 Aligned_cols=227 Identities=12% Similarity=0.131 Sum_probs=148.2
Q ss_pred CCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--h
Q 013273 80 DNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--V 155 (446)
Q Consensus 80 ~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--~ 155 (446)
++++|||||++ +||+++++.|+++|++|++.+|++... -+.+..+..+...............+.++.+|+.+. +
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~~~~-l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~ 80 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN-IFMKNYKNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHHHHH-HHHHHHHTTTTTGGGBCSSSCBCCEEEEEECCTTCSSGG
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCcccc-ccccchHHHHHHHHHHHhhcccccccccccccccccchh
Confidence 57899999875 999999999999999999888765210 000011111110000000011224578999999887 6
Q ss_pred ------------------cHHHHh-------cCCCEEEEcccCCC--------CccCCCCCcccchHHHHHHHHHHHHhC
Q 013273 156 ------------------QIEPAL-------GNASVVICCIGASE--------KEVFDITGPYRIDFQATKNLVDAATIA 202 (446)
Q Consensus 156 ------------------~~~~a~-------~~~D~VI~~Ag~~~--------~~~~~~~~~~~vNv~g~~~l~~aa~~~ 202 (446)
++++++ +++|+||||||... .+..++...+++|+.++.++++++...
T Consensus 81 ~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~ 160 (329)
T 3lt0_A 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred hhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 666655 57899999999531 122335566899999999999998654
Q ss_pred --CCCEEEEEccccccCCCCchhhhchhh-HHHHHHHHHHHHHH-------h-CCCCEEEEecCCccCCCcccccc-c--
Q 013273 203 --KVNHFIMVSSLGTNKFGFPAAILNLFW-GVLLWKRKAEEALI-------A-SGLPYTIVRPGGMERPTDAYKET-H-- 268 (446)
Q Consensus 203 --~v~r~V~vSS~~~~~~~~~~~~~~~~~-~Y~~sK~~~E~~l~-------~-~gl~~tivRPg~v~gp~~~~~~~-~-- 268 (446)
..++||++||....... .... .|+.+|+..+.+.+ . .|+++++|.||+|.++....... .
T Consensus 161 m~~~g~Iv~isS~~~~~~~------~~~~~~Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~ 234 (329)
T 3lt0_A 161 MKPQSSIISLTYHASQKVV------PGYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNT 234 (329)
T ss_dssp EEEEEEEEEEECGGGTSCC------TTCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHTCC-----
T ss_pred HhhCCeEEEEeCccccCCC------CcchHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeechhHhhhhhhccc
Confidence 11599999998664321 2222 69999999887754 3 69999999999998762111000 0
Q ss_pred -------------------------c-----------------eeecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCc
Q 013273 269 -------------------------N-----------------ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCK 305 (446)
Q Consensus 269 -------------------------~-----------------~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~ 305 (446)
. ..........+.+..++|+|+++++++.+.. ...|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~peevA~~v~fL~s~~a~~itG~ 314 (329)
T 3lt0_A 235 YENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQ 314 (329)
T ss_dssp -------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSC
T ss_pred ccccccccccccccccchhhcccccchhhhhhhhcccchhHHHHHHHhhcCcccCcCCHHHHHHHHHHHhCchhccccCc
Confidence 0 0000011223456899999999999997543 35688
Q ss_pred EEEEecCC
Q 013273 306 VVEVIAET 313 (446)
Q Consensus 306 v~ni~~~~ 313 (446)
++.+-++.
T Consensus 315 ~i~vdGG~ 322 (329)
T 3lt0_A 315 TIYVDNGL 322 (329)
T ss_dssp EEEESTTG
T ss_pred EEEEcCCe
Confidence 88887764
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.71 E-value=6.9e-17 Score=172.81 Aligned_cols=223 Identities=17% Similarity=0.099 Sum_probs=153.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC-CChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL-EKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl-~d~~ 155 (446)
.+++++++||||+++||+++++.|+++|++|++.+|.. .+.+.++++.. + .++..+.+|+ .+.+
T Consensus 319 ~l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~--~~~~~~~i~~~---------g----~~~~~~~~Dv~~~~~ 383 (604)
T 2et6_A 319 SLKDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKD--ATKTVDEIKAA---------G----GEAWPDQHDVAKDSE 383 (604)
T ss_dssp CCTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSC--CHHHHHHHHHT---------T----CEEEEECCCHHHHHH
T ss_pred ccCCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCcc--HHHHHHHHHhc---------C----CeEEEEEcChHHHHH
Confidence 35678999999999999999999999999999988642 23334444332 2 4577788898 5543
Q ss_pred cH----HHHhcCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 156 QI----EPALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 156 ~~----~~a~~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
.+ .+.++++|++|||||.... +..+++..+++|+.|+.++++++. +.+.++||++||.......
T Consensus 384 ~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag~~~~-- 461 (604)
T 2et6_A 384 AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSGIYGN-- 461 (604)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHHHSCC--
T ss_pred HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhhccCC--
Confidence 32 2234789999999996432 223456678999999999988874 3455799999997653221
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHH
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|..+..+.+ .+|++++.|.||. .++... . . ... . ......++|+|+++++
T Consensus 462 ----~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~PG~-~T~m~~---~--~-~~~--~-~~~~~~pe~vA~~v~~ 527 (604)
T 2et6_A 462 ----FGQANYSSSKAGILGLSKTMAIEGAKNNIKVNIVAPHA-ETAMTL---S--I-MRE--Q-DKNLYHADQVAPLLVY 527 (604)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECC-CCCC------------------CCSSCGGGTHHHHHH
T ss_pred ----CCChhHHHHHHHHHHHHHHHHHHhCccCeEEEEEcCCC-CCcccc---c--c-Cch--h-hccCCCHHHHHHHHHH
Confidence 234579999999887755 3799999999984 333110 0 0 000 0 1234689999999999
Q ss_pred HHhCCCCCCCcEEEEecCC-----------------CCChhhHHHHHHhccCC
Q 013273 295 MAKNRSLSYCKVVEVIAET-----------------TAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 295 ll~~~~~~~~~v~ni~~~~-----------------~~t~~~i~e~l~~i~~~ 330 (446)
++.+.....|+++.+.++. ..+..++.+...++...
T Consensus 528 L~s~~~~itG~~~~vdGG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 580 (604)
T 2et6_A 528 LGTDDVPVTGETFEIGGGWIGNTRWQRAKGAVSHDEHTTVEFIKEHLNEITDF 580 (604)
T ss_dssp TTSTTCCCCSCEEEEETTEEEEEEEEECCCEECCSSSCCHHHHHHHHHHHTCC
T ss_pred HhCCccCCCCcEEEECCCeeEeeeeeccccccCCCCCCCHHHHHHHHHHHhcc
Confidence 9876443567888877652 23556666666666554
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-18 Score=171.76 Aligned_cols=168 Identities=14% Similarity=0.040 Sum_probs=120.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
+.|+|+||||+||||++++..|+++|+ +|+++++... +.......+.. ..+.++ +
T Consensus 3 ~~mkVlVtGaaGfIG~~l~~~L~~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~---------------~~~~~~-~ 66 (327)
T 1y7t_A 3 APVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELED---------------CAFPLL-A 66 (327)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT---------------TTCTTE-E
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCCCCCCCCEEEEEeCCCchhhccchhhhhhc---------------cccccc-C
Confidence 446899999999999999999999996 8999988652 22211111111 112233 6
Q ss_pred CCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEccccc-cCCCCch-h-h
Q 013273 150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSSLGT-NKFGFPA-A-I 224 (446)
Q Consensus 150 Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vSS~~~-~~~~~~~-~-~ 224 (446)
|+.+...+.+++.++|+|||+||.......+....+++|+.++.++++++++++ .+ +||++|+... ..+-... . .
T Consensus 67 di~~~~~~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~~~~~~~~~ 146 (327)
T 1y7t_A 67 GLEATDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNALIAYKNAPG 146 (327)
T ss_dssp EEEEESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHHHHHHTCTT
T ss_pred CeEeccChHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHHHHHHHcCC
Confidence 787777788999999999999997654334445568899999999999999885 54 7888777431 0110000 1 1
Q ss_pred hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCc
Q 013273 225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTD 262 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~ 262 (446)
..+...|+.+|+..|++.+ ..|+++++||++++||+++
T Consensus 147 ~~p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 147 LNPRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp SCGGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred CChhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 2355569999999998764 4699999999999999965
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=99.70 E-value=8.7e-17 Score=172.02 Aligned_cols=203 Identities=17% Similarity=0.110 Sum_probs=141.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc---------hhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~---------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+++++++||||+++||+++++.|+++|++|++.+|+. +..+.+.+++... | .++ .
T Consensus 6 l~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~---------g----~~~---~ 69 (604)
T 2et6_A 6 FKDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKN---------G----GVA---V 69 (604)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHT---------T----CEE---E
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhc---------C----CeE---E
Confidence 4678999999999999999999999999999998765 4555555555432 1 222 2
Q ss_pred cCCCChhcHHHH-------hcCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEc
Q 013273 149 CDLEKRVQIEPA-------LGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVS 211 (446)
Q Consensus 149 ~Dl~d~~~~~~a-------~~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vS 211 (446)
+|+.|.++++++ ++++|++|||||.... +..+++..+++|+.|+.++++++. +.+.++||++|
T Consensus 70 ~d~~d~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnis 149 (604)
T 2et6_A 70 ADYNNVLDGDKIVETAVKNFGTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTS 149 (604)
T ss_dssp EECCCTTCHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEC
T ss_pred EEcCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEC
Confidence 577766544433 4689999999996422 233456678999999999988874 34557999999
Q ss_pred cccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccC
Q 013273 212 SLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 212 S~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~ 284 (446)
|....... .....|+.+|+.++.+.+ .+|++++.|.|| +.++. ... . .. .. ......
T Consensus 150 S~ag~~~~------~~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg-~~T~m---~~~--~-~~--~~-~~~~~~ 213 (604)
T 2et6_A 150 SPAGLYGN------FGQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL-ARSRM---TES--I-MP--PP-MLEKLG 213 (604)
T ss_dssp CHHHHHCC------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC-CCCHH---HHT--T-SC--HH-HHTTCS
T ss_pred CHHHcCCC------CCchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC-CcCcc---ccc--c-CC--hh-hhccCC
Confidence 97553221 234579999999887765 379999999997 33221 000 0 00 00 112468
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
++|+|.++++++.+.....|+++.+.++
T Consensus 214 pe~vA~~v~~L~s~~~~itG~~~~vdgG 241 (604)
T 2et6_A 214 PEKVAPLVLYLSSAENELTGQFFEVAAG 241 (604)
T ss_dssp HHHHHHHHHHHTSSSCCCCSCEEEEETT
T ss_pred HHHHHHHHHHHhCCcccCCCCEEEECCC
Confidence 9999999999998765456888888765
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=99.70 E-value=1.2e-17 Score=169.31 Aligned_cols=203 Identities=12% Similarity=0.041 Sum_probs=134.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcCchhHH------------HHHHHHHHhhhcccccccCCCCCCceE
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEMLE 145 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R~~~~~~------------~l~~~~~~~~l~~~~~~~g~~~~~~v~ 145 (446)
.+|++|||||+++||+++++.|++ .|++|++++|+.+... .+.+.++.. | .++.
T Consensus 60 ~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~---------G----~~a~ 126 (422)
T 3s8m_A 60 GPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAA---------G----LYSK 126 (422)
T ss_dssp SCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHT---------T----CCEE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhc---------C----CcEE
Confidence 478999999999999999999999 9999999999765432 122223221 2 5688
Q ss_pred EEEcCCCChhcHHHHh--------cCCCEEEEcccCCC--------------Cc--------------------------
Q 013273 146 LVECDLEKRVQIEPAL--------GNASVVICCIGASE--------------KE-------------------------- 177 (446)
Q Consensus 146 ~v~~Dl~d~~~~~~a~--------~~~D~VI~~Ag~~~--------------~~-------------------------- 177 (446)
.+.+|++|.+++++++ +++|+||||||... ..
T Consensus 127 ~i~~Dvtd~~~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~t 206 (422)
T 3s8m_A 127 SINGDAFSDAARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDTIIQASIEPAS 206 (422)
T ss_dssp EEESCTTSHHHHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCC
T ss_pred EEEecCCCHHHHHHHHHHHHHHcCCCCCEEEEcCccccccccccccccccccccccccccccccccccccccccccCCCC
Confidence 9999999988776654 57899999998620 00
Q ss_pred cCCCCCcccchHHHHH-HHHHHHHhCC----CCEEEEEccccccCCCCchhhhchh--hHHHHHHHHHHHHHH-------
Q 013273 178 VFDITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------- 243 (446)
Q Consensus 178 ~~~~~~~~~vNv~g~~-~l~~aa~~~~----v~r~V~vSS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------- 243 (446)
..+++..+++|..+.. .+++++.... .+++|++||.+.... .... ..|+.+|..++.+.+
T Consensus 207 ~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~------~p~~~~~aY~ASKaAl~~lTrsLA~Ela 280 (422)
T 3s8m_A 207 AQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEIT------WPIYWHGALGKAKVDLDRTAQRLNARLA 280 (422)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGG------HHHHTSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhcc------CCCccchHHHHHHHHHHHHHHHHHHHhC
Confidence 0111222334444443 5666664432 258999999875321 1222 579999999987765
Q ss_pred hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 244 ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 244 ~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
..|+++++|.||.+.++...................+..-..+|||+++.+|+.+.-
T Consensus 281 ~~GIRVNaVaPG~i~T~~~~~ip~~~~~~~~~~~~m~r~G~pEdva~~v~~L~sd~l 337 (422)
T 3s8m_A 281 KHGGGANVAVLKSVVTQASAAIPVMPLYISMVYKIMKEKGLHEGTIEQLDRLFRERL 337 (422)
T ss_dssp TTTCEEEEEEECCCCCTTGGGSTHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred ccCEEEEEEEcCCCcChhhhcCCCChHHHHHHHhhhcCCcChHHHHHHHHHHhcchh
Confidence 379999999999998874321111010000001123345567899999999998753
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=1.8e-17 Score=166.76 Aligned_cols=203 Identities=13% Similarity=0.046 Sum_probs=135.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcCchhHH------------HHHHHHHHhhhcccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAE------------NLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R~~~~~~------------~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
..++++|||||+++||+++++.|++ .|++|++++|+.+... .+.+.++.. | .++
T Consensus 45 ~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~~~---------G----~~a 111 (405)
T 3zu3_A 45 NGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAAQK---------G----LYA 111 (405)
T ss_dssp TCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHHHT---------T----CCE
T ss_pred CCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHHhc---------C----Cce
Confidence 4578999999999999999999999 9999999998754321 122222221 2 568
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCC--------------C--------------------------c
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASE--------------K--------------------------E 177 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~--------------~--------------------------~ 177 (446)
..+.+|++|.+++++++ +++|++|||||... . +
T Consensus 112 ~~i~~Dvtd~~~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~~~~~i~~~t 191 (405)
T 3zu3_A 112 KSINGDAFSDEIKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVIKESVLQPAT 191 (405)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEEEEEEECCCC
T ss_pred EEEECCCCCHHHHHHHHHHHHHHcCCCCEEEEcCccccccCccccccccccccccccccccccccccccccccccCCCCC
Confidence 89999999998877765 57899999998631 0 1
Q ss_pred cCCCCCcccchHHHHH-HHHHHHHhC----CCCEEEEEccccccCCCCchhhhchh--hHHHHHHHHHHHHHH-------
Q 013273 178 VFDITGPYRIDFQATK-NLVDAATIA----KVNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------- 243 (446)
Q Consensus 178 ~~~~~~~~~vNv~g~~-~l~~aa~~~----~v~r~V~vSS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------- 243 (446)
..+++..+++|..+.. .+++++... +.+++|++||.+..... ... ..|+.+|..++.+.+
T Consensus 192 ~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~------p~~~~~aY~AaKaal~~ltrsLA~Ela 265 (405)
T 3zu3_A 192 QSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITH------DIYWNGSIGAAKKDLDQKVLAIRESLA 265 (405)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGT------TTTTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcC------CCccchHHHHHHHHHHHHHHHHHHHhC
Confidence 1122333556666655 566665432 12589999998763221 112 579999999998765
Q ss_pred hC-CCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCC
Q 013273 244 AS-GLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNR 299 (446)
Q Consensus 244 ~~-gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~ 299 (446)
.. |+++++|.||.+.++...................+.+-..+|+++++.+|+.+.
T Consensus 266 ~~~GIRVNaVaPG~i~T~~s~~ip~~p~y~~~l~~~mkr~G~~Ed~a~~i~~L~sd~ 322 (405)
T 3zu3_A 266 AHGGGDARVSVLKAVVSQASSAIPMMPLYLSLLFKVMKEKGTHEGCIEQVYSLYKDS 322 (405)
T ss_dssp TTTSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHT
T ss_pred cccCeEEEEEEeCCCcCchhhcCCCCcHHHHHHHHHHhcCCCcHHHHHHHHHHHhcc
Confidence 37 999999999999876321111100000001112334566789999999999863
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=99.68 E-value=1.1e-16 Score=185.34 Aligned_cols=213 Identities=13% Similarity=-0.011 Sum_probs=147.0
Q ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~-IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.++++|||||+|+ ||+++++.|+++|++|+++ .|+.++...+.+++... +. ....++.++.+|++|.+
T Consensus 673 l~gKvaLVTGASsGgIG~aIA~~La~~GA~Vvl~~~R~~~~l~~~~~eL~~~-~~--------~~g~~v~~v~~DVsd~~ 743 (1887)
T 2uv8_A 673 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK-YG--------AKGSTLIVVPFNQGSKQ 743 (1887)
T ss_dssp CTTCEEEEESCCSSSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHH-HC--------CTTCEEEEEECCTTCHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCCHHHHHHHHHHHHHH-hh--------cCCCeEEEEEecCCCHH
Confidence 56789999999999 9999999999999999998 57777766655554321 00 01157899999999999
Q ss_pred cHHHHhc-------------CCCEEEEcccCCCCc---------cCCCCCcccchHHHHHHHHHHHHhC------CCCEE
Q 013273 156 QIEPALG-------------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATIA------KVNHF 207 (446)
Q Consensus 156 ~~~~a~~-------------~~D~VI~~Ag~~~~~---------~~~~~~~~~vNv~g~~~l~~aa~~~------~v~r~ 207 (446)
+++++++ ++|+||||||..... ..++...+++|+.++.+++++++.. +.++|
T Consensus 744 sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~~l~~a~~~lp~m~~~~~G~I 823 (1887)
T 2uv8_A 744 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI 823 (1887)
T ss_dssp HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCCSCCEEEE
T ss_pred HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHHHHHHHHHhhhhhhhCCCCEE
Confidence 8887652 589999999965332 1234566889999999999988432 22599
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHH-HH----h--CCCCEEEEecCCccC-CCcccccccceeecccCccc
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEA-LI----A--SGLPYTIVRPGGMER-PTDAYKETHNITLSQEDTLF 279 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~-l~----~--~gl~~tivRPg~v~g-p~~~~~~~~~~~~~~~~~~~ 279 (446)
|++||...... ....|+.+|+..+.+ .+ + ..++++.|+||++.+ +.........-.+. ...
T Consensus 824 VnISS~ag~~g--------g~~aYaASKAAL~~Lttr~lA~ela~~IrVNaV~PG~V~tT~m~~~~~~~~~~~~---~~p 892 (1887)
T 2uv8_A 824 LPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSANNIIAEGIE---KMG 892 (1887)
T ss_dssp EEECSCTTCSS--------CBTTHHHHHHHGGGHHHHHHHSSCTTTEEEEEEEECCEECC-----CCTTHHHHH---TTS
T ss_pred EEEcChHhccC--------CCchHHHHHHHHHHHHHHHHHHHhCCCeEEEEEEecccccccccccchhHHHHHH---hcC
Confidence 99999765332 234699999999887 32 1 228999999999984 32110000000000 011
Q ss_pred CCccCHHHHHHHHHHHHhCC--CCCCCcEEEEe
Q 013273 280 GGQVSNLQVAELLACMAKNR--SLSYCKVVEVI 310 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~--~~~~~~v~ni~ 310 (446)
....+++|+|+++++++.+. ....|+++.+.
T Consensus 893 lr~~sPEEVA~avlfLaSd~~as~iTGq~I~VD 925 (1887)
T 2uv8_A 893 VRTFSQKEMAFNLLGLLTPEVVELCQKSPVMAD 925 (1887)
T ss_dssp CCCEEHHHHHHHHHGGGSHHHHHHHHHSCEEEE
T ss_pred CCCCCHHHHHHHHHHHhCCCccccccCcEEEEE
Confidence 13568999999999998765 11246677763
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=99.66 E-value=2.8e-16 Score=181.69 Aligned_cols=212 Identities=12% Similarity=-0.022 Sum_probs=145.5
Q ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~-IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+|+ ||+++++.|+++|++|++++ |+.++.....+++... +. ....++.++.+|++|.+
T Consensus 650 L~gKvaLVTGASgGgIG~aIAr~LA~~GA~VVl~~~R~~~~l~~~a~eL~~e-l~--------~~G~~v~~v~~DVsd~e 720 (1878)
T 2uv9_A 650 FQGKHALMTGAGAGSIGAEVLQGLLSGGAKVIVTTSRFSRQVTEYYQGIYAR-CG--------ARGSQLVVVPFNQGSKQ 720 (1878)
T ss_dssp CTTCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHHHHH-HC--------CTTCEEEEEECCTTCHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCChHHHHHHHHHHHHH-hh--------ccCCeEEEEEcCCCCHH
Confidence 56789999999999 99999999999999999985 6666655544444221 10 00157899999999999
Q ss_pred cHHHHhc-----------CCCEEEEcccCCCCc---------cCCCCCcccchHHHHHHHHHHHH--hC----CCCEEEE
Q 013273 156 QIEPALG-----------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAAT--IA----KVNHFIM 209 (446)
Q Consensus 156 ~~~~a~~-----------~~D~VI~~Ag~~~~~---------~~~~~~~~~vNv~g~~~l~~aa~--~~----~v~r~V~ 209 (446)
+++++++ .+|+||||||..... ..++...+++|+.++.+++++++ .. +.++||+
T Consensus 721 sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l~~a~~~lp~M~~~~~G~IVn 800 (1878)
T 2uv9_A 721 DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGAIKTQKKERGYETRPAQVILP 800 (1878)
T ss_dssp HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCSCCEEECCE
T ss_pred HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhCCCCEEEE
Confidence 8887762 589999999965332 12345568899999999987742 21 2358999
Q ss_pred EccccccCCCCchhhhchhhHHHHHHHHHHHHHH----h---CCCCEEEEecCCcc-CCCcccccccceeecccCcccCC
Q 013273 210 VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A---SGLPYTIVRPGGME-RPTDAYKETHNITLSQEDTLFGG 281 (446)
Q Consensus 210 vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~---~gl~~tivRPg~v~-gp~~~~~~~~~~~~~~~~~~~~~ 281 (446)
+||...... ....|+.+|..++.+++ + .+++++.|.||++. ++.........-.+.. ....
T Consensus 801 ISS~ag~~g--------g~~aYaASKAAL~aLt~~laAeEla~~IrVNaVaPG~V~gT~m~~~~~~~~~~~~~---~plr 869 (1878)
T 2uv9_A 801 LSPNHGTFG--------NDGLYSESKLALETLFNRWYSESWGNYLTICGAVIGWTRGTGLMSANNLVAEGVEK---LGVR 869 (1878)
T ss_dssp ECSCSSSSS--------CCSSHHHHHHHHTTHHHHHHHSTTTTTEEEEEEEECCBCCTTSCSHHHHTHHHHHT---TTCC
T ss_pred EcchhhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEecceecCcccccchhhHHHHHh---cCCC
Confidence 999765332 13469999999987743 1 23899999999998 5531110000000000 1113
Q ss_pred ccCHHHHHHHHHHHHhCCC--CCCCcEEEE
Q 013273 282 QVSNLQVAELLACMAKNRS--LSYCKVVEV 309 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~--~~~~~v~ni 309 (446)
..+++|+|+++++++.+.. ...++++.+
T Consensus 870 ~~sPeEVA~avlfLaSd~a~s~iTGq~I~V 899 (1878)
T 2uv9_A 870 TFSQQEMAFNLLGLMAPAIVNLCQSDPVFA 899 (1878)
T ss_dssp CBCHHHHHHHHHHHHSHHHHHHHTTSCEEE
T ss_pred CCCHHHHHHHHHHHhCCcccccccCcEEEE
Confidence 5699999999999986542 234677776
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.65 E-value=3.5e-17 Score=184.00 Aligned_cols=213 Identities=14% Similarity=-0.005 Sum_probs=144.3
Q ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEE-EcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAG-VRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~-IG~~lv~~L~~~G~~V~~~-~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||||||+|+ ||+++++.|+++|++|+++ .|+.++...+.+++... ......++.++.+|++|.+
T Consensus 474 L~GKvALVTGASgGGIGrAIAr~LA~~GA~VVL~~~R~~e~lee~a~eL~ae---------l~a~Ga~V~vV~~DVTD~e 544 (1688)
T 2pff_A 474 FKDKYVLITGAGKGSIGAEVLQGLLQGGAKVVVTTSRFSKQVTDYYQSIYAK---------YGAKGSTLIVVPFNQGSKQ 544 (1688)
T ss_dssp CCSCCEEECSCSSSSTHHHHHHHHHHHTCEEEEEESSCSTTTTTHHHHTTTT---------TCCTTCEEEEEECCSSSTT
T ss_pred cCCCEEEEECCChHHHHHHHHHHHHHCcCEEEEEeCCCHHHHHHHHHHHHHH---------hhcCCCeEEEEEeCCCCHH
Confidence 46789999999998 9999999999999999998 57666555444333110 0001247899999999999
Q ss_pred cHHHHhc-------------CCCEEEEcccCCCCc---------cCCCCCcccchHHHHHHHHHHHHh--C----CCCEE
Q 013273 156 QIEPALG-------------NASVVICCIGASEKE---------VFDITGPYRIDFQATKNLVDAATI--A----KVNHF 207 (446)
Q Consensus 156 ~~~~a~~-------------~~D~VI~~Ag~~~~~---------~~~~~~~~~vNv~g~~~l~~aa~~--~----~v~r~ 207 (446)
+++++++ ++|+||||||..... ..++...+++|+.++.+++++++. . +.++|
T Consensus 545 sVeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~~Ltqaa~~lp~M~krggGrI 624 (1688)
T 2pff_A 545 DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETRPAQVI 624 (1688)
T ss_dssp HHHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHHHHHHHHHHHHTCTTSCEEEC
T ss_pred HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHHHHHHHHHhChHHHhCCCCEE
Confidence 8887752 589999999965332 122355688999999999998832 2 22589
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHH-H----h--CCCCEEEEecCCccCCCcccccccceeecccCcccC
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEAL-I----A--SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFG 280 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l-~----~--~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~ 280 (446)
|++||...... ....|+.+|+..+.++ + + ..++++.|+||++.+....... ............
T Consensus 625 VnISSiAG~~G--------g~saYaASKAAL~aLttrsLAeEla~~IRVNaVaPG~V~TT~M~~~~--e~~~~~l~~ipl 694 (1688)
T 2pff_A 625 LPMSPNHGTFG--------GDGMYSESKLSLETLFNRWHSESWANQLTVCGAIIGWTRGTGLMSAN--NIIAEGIEKMGV 694 (1688)
T ss_dssp CCCCSCTTTSS--------CBTTHHHHHHHHTHHHHHTTTSSCTTTEECCCCCCCCCCCCSSSCTT--TTCSTTTSSSSC
T ss_pred EEEEChHhccC--------CchHHHHHHHHHHHHHHHHHHHHcCCCeEEEEEEECcCcCCcccCCc--hHHHHHHHhCCC
Confidence 99999765332 2347999999999883 3 1 2388899999999853211000 000000001111
Q ss_pred CccCHHHHHHHHHHHHhCCC--CCCCcEEEE
Q 013273 281 GQVSNLQVAELLACMAKNRS--LSYCKVVEV 309 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~--~~~~~v~ni 309 (446)
...+++|+|+++++++.+.. ...++++.+
T Consensus 695 R~~sPEEVA~aIlFLaSd~sAs~ITGq~I~V 725 (1688)
T 2pff_A 695 RTFSQKEMAFNLLGLLTPEVVELCQKSPVMA 725 (1688)
T ss_dssp CCCCCCTTHHHHHHHTSTTHHHHHTTSCCCC
T ss_pred CCCCHHHHHHHHHHHhCCCccccccCcEEEE
Confidence 34688999999999997651 123566655
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=99.65 E-value=1.4e-16 Score=162.46 Aligned_cols=204 Identities=10% Similarity=0.034 Sum_probs=131.5
Q ss_pred CCCCEEEEECCCcHHHHH--HHHHHHHCCCeEEEEEcCchh------------HHHHHHHHHHhhhcccccccCCCCCCc
Q 013273 78 KDDNLAFVAGATGKVGSR--TVRELLKLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEM 143 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~--lv~~L~~~G~~V~~~~R~~~~------------~~~l~~~~~~~~l~~~~~~~g~~~~~~ 143 (446)
..++++|||||+++||++ +++.|+++|++|++++|+... ...+.+.++.. | .+
T Consensus 58 ~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~---------g----~~ 124 (418)
T 4eue_A 58 RGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKK---------G----LV 124 (418)
T ss_dssp CCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHT---------T----CC
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHc---------C----Cc
Confidence 467899999999999999 999999999999999997543 12332222221 2 56
Q ss_pred eEEEEcCCCChhcHHHHh-------cCCCEEEEcccCCC--------------Cc-------------------------
Q 013273 144 LELVECDLEKRVQIEPAL-------GNASVVICCIGASE--------------KE------------------------- 177 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~--------------~~------------------------- 177 (446)
+.++.+|++|.+++++++ +++|+||||||... ..
T Consensus 125 ~~~~~~Dvtd~~~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~~~~~~~~~ 204 (418)
T 4eue_A 125 AKNFIEDAFSNETKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEITLKKVSSA 204 (418)
T ss_dssp EEEEESCTTCHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEEEEEEECBC
T ss_pred EEEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEECCcccccccccccccccccccccccccccccccccccccccccccCC
Confidence 899999999998887765 46899999999641 00
Q ss_pred -cCCCCCcccchHHHHH-HHHHHHHhCC----CCEEEEEccccccCCCCchhhhchh--hHHHHHHHHHHHHHH------
Q 013273 178 -VFDITGPYRIDFQATK-NLVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALI------ 243 (446)
Q Consensus 178 -~~~~~~~~~vNv~g~~-~l~~aa~~~~----v~r~V~vSS~~~~~~~~~~~~~~~~--~~Y~~sK~~~E~~l~------ 243 (446)
..++...+++|..+.. .+++++...+ ..++|++||.+..... ... ..|+.+|..++.+.+
T Consensus 205 t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------p~~~~~aY~ASKaAL~~ltrsLA~EL 278 (418)
T 4eue_A 205 SIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------KIYREGTIGIAKKDLEDKAKLINEKL 278 (418)
T ss_dssp CHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------TTTTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------CccccHHHHHHHHHHHHHHHHHHHHh
Confidence 0011112233333333 4555554432 2489999998653321 122 579999999887754
Q ss_pred -h-CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 244 -A-SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 244 -~-~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
. .|+++++|.||.+.++...................+..-..+|+++.+.+++.+.-
T Consensus 279 a~~~GIrVN~V~PG~v~T~~s~~ip~~p~y~~~~~~~mk~~G~~E~v~e~~~~L~sd~~ 337 (418)
T 4eue_A 279 NRVIGGRAFVSVNKALVTKASAYIPTFPLYAAILYKVMKEKNIHENCIMQIERMFSEKI 337 (418)
T ss_dssp HHHHSCEEEEEECCCCCCHHHHTSTTHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCccCeEEEEEECCcCcChhhhcCCCCcHHHHHHHHHHhhcCChHHHHHHHHHHhhccc
Confidence 4 69999999999998763211110000000001112233557889999999998753
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=99.59 E-value=4.2e-15 Score=163.59 Aligned_cols=201 Identities=16% Similarity=0.154 Sum_probs=145.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCC-eEEEEEcCc---hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELL-KLGF-RVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~-~~G~-~V~~~~R~~---~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
..++++|||||+|+||+.+++.|+ ++|+ +|++++|+. +..+++.++++.. | .++.++.+|++
T Consensus 528 ~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---------G----~~v~~~~~Dvs 594 (795)
T 3slk_A 528 DAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLTAY---------G----AEVSLQACDVA 594 (795)
T ss_dssp CTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTT
T ss_pred ccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHHhc---------C----CcEEEEEeecC
Confidence 456899999999999999999999 7898 599999984 4455555555432 2 57999999999
Q ss_pred ChhcHHHHhc------CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC
Q 013273 153 KRVQIEPALG------NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 153 d~~~~~~a~~------~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~ 220 (446)
|.++++++++ .+|+||||||.... +..+++..+++|+.|+.+|.+++. ... +||++||.......
T Consensus 595 d~~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~-~~l-~iV~~SS~ag~~g~- 671 (795)
T 3slk_A 595 DRETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELID-PDV-ALVLFSSVSGVLGS- 671 (795)
T ss_dssp CHHHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSC-TTS-EEEEEEETHHHHTC-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHh-hCC-EEEEEccHHhcCCC-
Confidence 9999998874 46999999997532 223455668899999999999983 344 99999997653321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHh
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAK 297 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~ 297 (446)
..+..|+.+|...+.+.+ ..|++++.|.||.+.+.+......... ...........+..+++.+.+..++.
T Consensus 672 -----~g~~~YaAaka~~~alA~~~~~~Gi~v~sI~pG~v~t~g~~~~~~~~~-~~~~~~~g~~~l~~~e~~~~~~~~l~ 745 (795)
T 3slk_A 672 -----GGQGNYAAANSFLDALAQQRQSRGLPTRSLAWGPWAEHGMASTLREAE-QDRLARSGLLPISTEEGLSQFDAACG 745 (795)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSCCCHHHHHHHHH-HHHHHHTTBCCCCHHHHHHHHHHHHT
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHcCCeEEEEECCeECcchhhccccHHH-HHHHHhcCCCCCCHHHHHHHHHHHHh
Confidence 235679999988876654 589999999999998764211100000 00000111245888999999988887
Q ss_pred CCC
Q 013273 298 NRS 300 (446)
Q Consensus 298 ~~~ 300 (446)
.+.
T Consensus 746 ~~~ 748 (795)
T 3slk_A 746 GAH 748 (795)
T ss_dssp SSC
T ss_pred CCC
Confidence 765
|
| >3mhp_C TIC62_peptide, ferredoxin--NADP reductase, LEAF isozyme, chlorop; FNR, oxidoreductase, thylakoid membrane, proton-FLUX, poly P helix; HET: FAD; 1.70A {Pisum sativum} | Back alignment and structure |
|---|
Probab=99.46 E-value=2.9e-14 Score=82.17 Aligned_cols=25 Identities=68% Similarity=1.173 Sum_probs=23.0
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCC
Q 013273 371 VTDPLSPYTSYEDLKPSSSPSPTPS 395 (446)
Q Consensus 371 ~~~Plspy~~~~~lkp~~~p~~~~~ 395 (446)
..||||||+.|+||||||||+|++|
T Consensus 2 ~~rPlSpy~~Y~dlKPPsSPsPs~P 26 (26)
T 3mhp_C 2 TEQPLSPYTAYDDLKPPSSPSPTKP 26 (26)
T ss_dssp CCCCSSTTTTBTTSSCSSCSSCCCC
T ss_pred CccccCccccccccCCCCCCCCCCC
Confidence 3599999999999999999999875
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=3.8e-12 Score=154.48 Aligned_cols=166 Identities=15% Similarity=0.095 Sum_probs=120.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++|||||+|+||+.+++.|+++|++ |++++|+..+.....+.++.++-. | .++.++.+|++|.+++
T Consensus 1883 ~~k~~lITGgs~GIG~aia~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~------g----~~v~~~~~Dvsd~~~v 1952 (2512)
T 2vz8_A 1883 PHKSYVITGGLGGFGLQLAQWLRLRGAQKLVLTSRSGIRTGYQARQVREWRRQ------G----VQVLVSTSNASSLDGA 1952 (2512)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCCEEEEECSSCCCSHHHHHHHHHHHHT------T----CEEEEECCCSSSHHHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEeCCCcchHHHHHHHHHHHhC------C----CEEEEEecCCCCHHHH
Confidence 5689999999999999999999999987 788889865543322222222111 2 4688999999999888
Q ss_pred HHHh------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchh
Q 013273 158 EPAL------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++++ +.+|+||||||... .+..++...+++|+.|+.++.+++... ..++||++||.......
T Consensus 1953 ~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~~~~g~iV~iSS~ag~~g~---- 2028 (2512)
T 2vz8_A 1953 RSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREACPELDYFVIFSSVSCGRGN---- 2028 (2512)
T ss_dssp HHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHCTTCCEEEEECCHHHHTTC----
T ss_pred HHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhcccCCEEEEecchhhcCCC----
Confidence 8765 46899999999642 244567788999999999998888653 34799999997653321
Q ss_pred hhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCC
Q 013273 224 ILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp 260 (446)
.....|+.+|...+.+.+ ..|++...+..|.+-+-
T Consensus 2029 --~g~~~Y~aaKaal~~l~~~rr~~Gl~~~a~~~g~~~~~ 2066 (2512)
T 2vz8_A 2029 --AGQANYGFANSAMERICEKRRHDGLPGLAVQWGAIGDV 2066 (2512)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHTTSCCCEEEECCBCTT
T ss_pred --CCcHHHHHHHHHHHHHHHHHHHCCCcEEEEEccCcCCc
Confidence 234579999999998876 58999888888776544
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2.6e-12 Score=155.85 Aligned_cols=226 Identities=15% Similarity=0.100 Sum_probs=141.1
Q ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCCeEEEEEcCchh-----HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC
Q 013273 78 KDDNLAFVAGATGK-VGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDL 151 (446)
Q Consensus 78 ~~~~~VlVtGatG~-IG~~lv~~L~~~G~~V~~~~R~~~~-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl 151 (446)
+.+|++|||||+++ ||+++++.|++.|++|++.+|+.+. .+.+.+++.. ...++.++.+|+
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~-------------~G~~~~~v~~Dv 2200 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHAR-------------FDATLWVVPANM 2200 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCC-------------TTCEEEEEECCT
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhh-------------cCCeEEEEEecC
Confidence 57899999999999 9999999999999999999998776 3333332211 114688999999
Q ss_pred CChhcHHHHh-----------cCCCEEEEcccCC----C-------CccCCCCCc----ccchHHHHHHHHHHHHh----
Q 013273 152 EKRVQIEPAL-----------GNASVVICCIGAS----E-------KEVFDITGP----YRIDFQATKNLVDAATI---- 201 (446)
Q Consensus 152 ~d~~~~~~a~-----------~~~D~VI~~Ag~~----~-------~~~~~~~~~----~~vNv~g~~~l~~aa~~---- 201 (446)
+|.+++++++ +++|++|||||.. . ....++... +++|+.++..+++++..
T Consensus 2201 td~~~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl~~~~~l~~~~~~~m~~ 2280 (3089)
T 3zen_D 2201 ASYSDIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLLWAVQRLISGLSKIGAE 2280 (3089)
T ss_dssp TCHHHHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9998887764 3589999999971 1 122334444 67888888888877743
Q ss_pred CCCC---EEEE-EccccccCCCCchhhhchhhHHHHHHHHHHHHHH----h----CCCCEEEEecCCccCCCcccccccc
Q 013273 202 AKVN---HFIM-VSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI----A----SGLPYTIVRPGGMERPTDAYKETHN 269 (446)
Q Consensus 202 ~~v~---r~V~-vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~----~----~gl~~tivRPg~v~gp~~~~~~~~~ 269 (446)
.+.. .+|. .|+... .. .....|+.+|..++.+.+ + .+++++.+.||++.+....... ..
T Consensus 2281 ~~~g~~~~ii~~~ss~~g-~~-------g~~~aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~tT~l~~~~-~~ 2351 (3089)
T 3zen_D 2281 RDIASRLHVVLPGSPNRG-MF-------GGDGAYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKGTGLMGQN-DA 2351 (3089)
T ss_dssp TTCCCCEEEEEEECSSTT-SC-------SSCSSHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEECSTTTTTT-TT
T ss_pred cCCCceeEEEEECCcccc-cC-------CCchHHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCCCcccccc-hh
Confidence 2321 2222 232211 11 112369999999887765 3 3578999999999743211000 00
Q ss_pred eeecccCcccCCccCHHHHHHHHHHHHhCCC--CCCCcE--EEEecCCCCChhhHHHHHHh
Q 013273 270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS--LSYCKV--VEVIAETTAPLTPMEELLAK 326 (446)
Q Consensus 270 ~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~--~~~~~v--~ni~~~~~~t~~~i~e~l~~ 326 (446)
. .............++|||.++++|+.... ...+.. +++.++-.....++.+++.+
T Consensus 2352 ~-~~~~~~~~~r~~~PeEIA~avlfLaS~~a~~~~~~~p~~vdl~GG~~~~~~~~~~~~~~ 2411 (3089)
T 3zen_D 2352 I-VSAVEEAGVTTYTTDEMAAMLLDLCTVETKVAAAGAPVKVDLTGGLGDIKIDMAELAAK 2411 (3089)
T ss_dssp T-HHHHGGGSCBCEEHHHHHHHHHHTTSHHHHHHHHHSCEEEECSBSCSSCCCCHHHHTHH
T ss_pred H-HHHHHhcCCCCCCHHHHHHHHHHHhChhhhhHhcCCeEEEEcCCCcCcCCCCHHHHHHH
Confidence 0 00000111234589999999999986532 112233 33445543323455555543
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=99.33 E-value=7.1e-12 Score=104.05 Aligned_cols=94 Identities=21% Similarity=0.166 Sum_probs=79.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|+|+|+ |++|+++++.|++.| ++|++++|++++...+.. .++.++.+|+.|.+.+
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~-------------------~~~~~~~~d~~~~~~~ 63 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLNR-------------------MGVATKQVDAKDEAGL 63 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHHT-------------------TTCEEEECCTTCHHHH
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHh-------------------CCCcEEEecCCCHHHH
Confidence 3568999999 999999999999999 999999999877665421 4678899999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEE
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI 208 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V 208 (446)
.+++.++|+|||+++.. ...++++++.+.|+++|.
T Consensus 64 ~~~~~~~d~vi~~~~~~----------------~~~~~~~~~~~~g~~~~~ 98 (118)
T 3ic5_A 64 AKALGGFDAVISAAPFF----------------LTPIIAKAAKAAGAHYFD 98 (118)
T ss_dssp HHHTTTCSEEEECSCGG----------------GHHHHHHHHHHTTCEEEC
T ss_pred HHHHcCCCEEEECCCch----------------hhHHHHHHHHHhCCCEEE
Confidence 99999999999998631 146788999999985554
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=99.05 E-value=4.4e-10 Score=109.05 Aligned_cols=82 Identities=21% Similarity=0.189 Sum_probs=71.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++||||+|+||+++++.|++.|++|++++|+.++.+.+.+++... .++.++.+|++|.+++
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~--------------~~~~~~~~D~~~~~~~ 182 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDASR 182 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhc--------------CCcEEEEecCCCHHHH
Confidence 45689999999999999999999999999999999988887776655432 2466788999999999
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
.++++.+|+||||+|.
T Consensus 183 ~~~~~~~DvlVn~ag~ 198 (287)
T 1lu9_A 183 AEAVKGAHFVFTAGAI 198 (287)
T ss_dssp HHHTTTCSEEEECCCT
T ss_pred HHHHHhCCEEEECCCc
Confidence 9999999999999975
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=99.04 E-value=2.1e-10 Score=113.56 Aligned_cols=118 Identities=10% Similarity=0.058 Sum_probs=86.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcC----chhHHHHHHHHHHhhhcccccccCCCCCCceEEE
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRS----VQRAENLVQSVKQMKLDGELANKGIQPVEMLELV 147 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~----~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v 147 (446)
+.++|+||||+||||++++..|+..|+ +|++++++ .++.......+... . ..+
T Consensus 4 ~~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~----------~-----~~~- 67 (329)
T 1b8p_A 4 TPMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDC----------A-----FPL- 67 (329)
T ss_dssp CCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTT----------T-----CTT-
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhh----------c-----ccc-
Confidence 346899999999999999999999885 89999888 44444322222210 0 011
Q ss_pred EcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEcc
Q 013273 148 ECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS 212 (446)
Q Consensus 148 ~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vSS 212 (446)
..|+....++.+++.++|+|||+||.......+....+..|+.++.++++++++.+ .+ +||++|.
T Consensus 68 ~~~i~~~~~~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 68 LAGMTAHADPMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp EEEEEEESSHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cCcEEEecCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 13555556788999999999999997654333334456789999999999999884 55 8999886
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=99.02 E-value=9.5e-10 Score=108.72 Aligned_cols=118 Identities=14% Similarity=0.103 Sum_probs=85.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+|+|+|+||+||||..++..|+..| ++|++++++++ ......+... .....+.. +.+..+
T Consensus 7 ~~mKI~ViGAaG~VG~~la~~L~~~g~~~ev~l~Di~~~--~~~~~dL~~~-----------~~~~~v~~----~~~t~d 69 (326)
T 1smk_A 7 PGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNA--PGVTADISHM-----------DTGAVVRG----FLGQQQ 69 (326)
T ss_dssp -CEEEEEETTTSTTHHHHHHHHHHCTTEEEEEEEESSSH--HHHHHHHHTS-----------CSSCEEEE----EESHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHhCCCCCEEEEEeCCCc--HhHHHHhhcc-----------cccceEEE----EeCCCC
Confidence 44689999999999999999999999 89999998775 1111112110 00012222 223456
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
+.+++.++|+|||+||............+.+|+.++.++++++++.+.+.+|+++|-
T Consensus 70 ~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv~SN 126 (326)
T 1smk_A 70 LEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNLISN 126 (326)
T ss_dssp HHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred HHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 788999999999999976544333445578899999999999999888888888873
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=99.00 E-value=1.5e-09 Score=106.75 Aligned_cols=118 Identities=19% Similarity=0.137 Sum_probs=82.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEc--CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R--~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+|+||||+||||++++..|+..|. +++++++ +.++.+.....+.... . .....+.+...| ++
T Consensus 1 mKI~V~GaaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~-~--------~~~~~~~i~~~~----d~ 67 (313)
T 1hye_A 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL-A--------GTRSDANIYVES----DE 67 (313)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH-T--------TSCCCCEEEEEE----TT
T ss_pred CEEEEECCCChhHHHHHHHHHhCCCCCEEEEEcCCCchhhhHHHHHHHHHhH-H--------hcCCCeEEEeCC----cc
Confidence 4899999999999999999999884 6888887 5544443222332210 0 000123333211 23
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.++++++|+|||+||.......+....++.|+.++.++++++++.+ +++|+++|
T Consensus 68 l~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~-~~~vlv~S 122 (313)
T 1hye_A 68 NLRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEIC-DTKIFVIT 122 (313)
T ss_dssp CGGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHC-CCEEEECS
T ss_pred hHHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhC-CeEEEEec
Confidence 67789999999999997654333334457889999999999999998 88888887
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=98.92 E-value=1.3e-08 Score=101.69 Aligned_cols=165 Identities=10% Similarity=-0.028 Sum_probs=107.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHH-HCCCeEEEEEcCchh------------HHHHHHHHHHhhhcccccccCCCCCCce
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELL-KLGFRVRAGVRSVQR------------AENLVQSVKQMKLDGELANKGIQPVEML 144 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~-~~G~~V~~~~R~~~~------------~~~l~~~~~~~~l~~~~~~~g~~~~~~v 144 (446)
..+|++|||||+.+||++.+..|+ +.|..|+++.|..+. ...+.+.+++. | .+.
T Consensus 48 ~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~~~---------G----~~a 114 (401)
T 4ggo_A 48 KAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAKRE---------G----LYS 114 (401)
T ss_dssp CCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHH---------T----CCE
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHHHc---------C----CCc
Confidence 457899999999999999999998 679999999886432 22333334433 3 678
Q ss_pred EEEEcCCCChhcHHHHh-------cCCCEEEEcccCCCCccCC----------------------C--CC--------cc
Q 013273 145 ELVECDLEKRVQIEPAL-------GNASVVICCIGASEKEVFD----------------------I--TG--------PY 185 (446)
Q Consensus 145 ~~v~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~~~~~----------------------~--~~--------~~ 185 (446)
..+.+|+.|.+.+++++ +++|+|||++|.......+ . .. .-
T Consensus 115 ~~i~~Dv~d~e~i~~vi~~i~~~~G~IDiLVhS~A~~~r~~p~~g~~~~S~LKpi~~~~~~~~ldt~~~~i~~~~l~pat 194 (401)
T 4ggo_A 115 VTIDGDAFSDEIKAQVIEEAKKKGIKFDLIVYSLASPVRTDPDTGIMHKSVLKPFGKTFTGKTVDPFTGELKEISAEPAN 194 (401)
T ss_dssp EEEESCTTSHHHHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEECTTTCCEEEEEECCCC
T ss_pred eeEeCCCCCHHHHHHHHHHHHHhcCCCCEEEEecccccccCCCCCceeeeeecccccccccccccccccccccccccCCc
Confidence 99999999998888776 5789999999964211000 0 00 00
Q ss_pred cchHHHHHH---------HHHHHHhCC----CCEEEEEccccccCCCCchhhhchh-hHHHHHHHHHHHHHHh-----CC
Q 013273 186 RIDFQATKN---------LVDAATIAK----VNHFIMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIA-----SG 246 (446)
Q Consensus 186 ~vNv~g~~~---------l~~aa~~~~----v~r~V~vSS~~~~~~~~~~~~~~~~-~~Y~~sK~~~E~~l~~-----~g 246 (446)
+-++.++.. .+.+....+ ..++|-+|+.|.... ..... ..++.+|...|...+. .+
T Consensus 195 ~eeie~T~~vMg~s~~s~w~~al~~a~lla~G~siva~SYiGse~t-----~P~Y~~G~mG~AKaaLEa~~r~La~eL~~ 269 (401)
T 4ggo_A 195 DEEAAATVKVMGGEDWERWIKQLSKEGLLEEGCITLAYSYIGPEAT-----QALYRKGTIGKAKEHLEATAHRLNKENPS 269 (401)
T ss_dssp HHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGG-----HHHHTTSHHHHHHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHhhhcccCCceEEEEeccCccee-----ecCCCccHHHHHHHHHHHHHHHHHHhcCC
Confidence 112233332 233333332 237888888765321 11222 2479999999987762 46
Q ss_pred CCEEEEecCCccCC
Q 013273 247 LPYTIVRPGGMERP 260 (446)
Q Consensus 247 l~~tivRPg~v~gp 260 (446)
+++.++.++.+-+.
T Consensus 270 ~~a~v~v~~a~vT~ 283 (401)
T 4ggo_A 270 IRAFVSVNKGLVTR 283 (401)
T ss_dssp EEEEEEECCCCCCT
T ss_pred CcEEEEEcCccccc
Confidence 77888888887665
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=5.1e-09 Score=89.64 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=75.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|+|+ |++|+.+++.|.+.|++|++++|++++.+.+. .....++.+|..|.+.+.
T Consensus 5 ~~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-------------------~~~~~~~~~d~~~~~~l~ 64 (144)
T 2hmt_A 5 KNKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-------------------SYATHAVIANATEENELL 64 (144)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-------------------TTCSEEEECCTTCHHHHH
T ss_pred cCCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-------------------HhCCEEEEeCCCCHHHHH
Confidence 4567999997 99999999999999999999999876544321 023567889999988887
Q ss_pred HH-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
++ ++++|+||++++.. ......+++.+++.+.+++|..++
T Consensus 65 ~~~~~~~d~vi~~~~~~--------------~~~~~~~~~~~~~~~~~~ii~~~~ 105 (144)
T 2hmt_A 65 SLGIRNFEYVIVAIGAN--------------IQASTLTTLLLKELDIPNIWVKAQ 105 (144)
T ss_dssp TTTGGGCSEEEECCCSC--------------HHHHHHHHHHHHHTTCSEEEEECC
T ss_pred hcCCCCCCEEEECCCCc--------------hHHHHHHHHHHHHcCCCeEEEEeC
Confidence 76 78899999998742 112234666777778777776554
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=98.90 E-value=9.1e-09 Score=100.62 Aligned_cols=116 Identities=9% Similarity=-0.025 Sum_probs=82.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEc--CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVR--SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R--~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+|+|+||+||||..++..|+..|. +++++++ +.++.+.....+.+... ....+.+.. | +
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~~~~~~~dl~~~~~----------~~~~~~v~~-~--~--- 64 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGIA----------YDSNTRVRQ-G--G--- 64 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHHT----------TTCCCEEEE-C--C---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhhHHHHHHHHHHHHh----------hCCCcEEEe-C--C---
Confidence 5899999999999999999999885 6888888 66554433333322100 012344443 2 2
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.++++++|+|||+||............+..|+.++.++++++++.+.+.+|+++|-
T Consensus 65 -~~a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 65 -YEDTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp -GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred -HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 45688999999999975443333234578899999999999999988888888873
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=98.85 E-value=2.7e-08 Score=85.44 Aligned_cols=74 Identities=26% Similarity=0.197 Sum_probs=62.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|+|+ |++|+++++.|.++|++|++++|++++.+.+.+ .++.++.+|.+|.+.++
T Consensus 5 ~~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~ 64 (141)
T 3llv_A 5 GRYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED-------------------EGFDAVIADPTDESFYR 64 (141)
T ss_dssp -CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEECCTTCHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH-------------------CCCcEEECCCCCHHHHH
Confidence 3568999997 999999999999999999999999887665432 35788999999999888
Q ss_pred HH-hcCCCEEEEccc
Q 013273 159 PA-LGNASVVICCIG 172 (446)
Q Consensus 159 ~a-~~~~D~VI~~Ag 172 (446)
++ +.++|+||.+.+
T Consensus 65 ~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 65 SLDLEGVSAVLITGS 79 (141)
T ss_dssp HSCCTTCSEEEECCS
T ss_pred hCCcccCCEEEEecC
Confidence 76 468999998876
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=98.82 E-value=4e-09 Score=108.73 Aligned_cols=116 Identities=18% Similarity=0.224 Sum_probs=82.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|+| +|++|+++++.|++.|++|++++|+.++.+.+.+ ..+++.++.+|+.|.+++.
T Consensus 2 ~~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~-----------------~~~~~~~~~~Dv~d~~~l~ 63 (450)
T 1ff9_A 2 ATKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSA-----------------GVQHSTPISLDVNDDAALD 63 (450)
T ss_dssp CCCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTT-----------------TCTTEEEEECCTTCHHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHH-----------------hcCCceEEEeecCCHHHHH
Confidence 357899998 8999999999999999999999999876654321 1135788899999999999
Q ss_pred HHhcCCCEEEEcccCCCCccC-----CC-CCcccc--hHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 159 PALGNASVVICCIGASEKEVF-----DI-TGPYRI--DFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~-----~~-~~~~~v--Nv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
+++.++|+||||++....... .. ...+.. ......+++++|+++|+ + +++..+.
T Consensus 64 ~~l~~~DvVIn~a~~~~~~~i~~a~l~~g~~vvd~~~~~~~~~~l~~aA~~aGv-~--~i~g~g~ 125 (450)
T 1ff9_A 64 AEVAKHDLVISLIPYTFHATVIKSAIRQKKHVVTTSYVSPAMMELDQAAKDAGI-T--VMNEIGL 125 (450)
T ss_dssp HHHTTSSEEEECCC--CHHHHHHHHHHHTCEEEESSCCCHHHHHTHHHHHHTTC-E--EECSCBB
T ss_pred HHHcCCcEEEECCccccchHHHHHHHhCCCeEEEeecccHHHHHHHHHHHHCCC-e--EEeCCCC
Confidence 999999999999986322100 00 011111 13467889999999987 3 3454443
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=98.81 E-value=1.9e-08 Score=102.35 Aligned_cols=96 Identities=15% Similarity=0.241 Sum_probs=76.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|++|+|+|| |+||+.+++.|++.| .+|++.+|+.++.+.+.+.+... + ..++.++.+|+.|.++
T Consensus 1 M~kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~---------~---~~~~~~~~~D~~d~~~ 67 (405)
T 4ina_A 1 MAKVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAK---------G---YGEIDITTVDADSIEE 67 (405)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHT---------T---CCCCEEEECCTTCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhh---------c---CCceEEEEecCCCHHH
Confidence 368999998 999999999999998 39999999999988877665431 0 1468899999999999
Q ss_pred HHHHhcC--CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC
Q 013273 157 IEPALGN--ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 157 ~~~a~~~--~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
+++++.+ +|+||||++... ...++++|.++|+
T Consensus 68 l~~~l~~~~~DvVin~ag~~~----------------~~~v~~a~l~~g~ 101 (405)
T 4ina_A 68 LVALINEVKPQIVLNIALPYQ----------------DLTIMEACLRTGV 101 (405)
T ss_dssp HHHHHHHHCCSEEEECSCGGG----------------HHHHHHHHHHHTC
T ss_pred HHHHHHhhCCCEEEECCCccc----------------ChHHHHHHHHhCC
Confidence 9999987 999999997521 1356666666665
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.79 E-value=1.1e-07 Score=80.89 Aligned_cols=98 Identities=17% Similarity=0.141 Sum_probs=73.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|+|+|+ |++|+.+++.|.+.|++|++++|++++...+.+. .++.++.+|..+.+.+.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~------------------~~~~~~~~d~~~~~~l~~ 64 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLED 64 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh------------------cCcEEEEcCCCCHHHHHH
Confidence 468999996 9999999999999999999999988766544321 246678899998887765
Q ss_pred H-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 160 a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+ +.++|+||++.+.. ..| ..+.+.++..+.+++|..+
T Consensus 65 ~~~~~~d~vi~~~~~~-----------~~~----~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 65 AGIEDADMYIAVTGKE-----------EVN----LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp TTTTTCSEEEECCSCH-----------HHH----HHHHHHHHHTTCCCEEEEC
T ss_pred cCcccCCEEEEeeCCc-----------hHH----HHHHHHHHHcCCCEEEEEe
Confidence 5 68899999997531 122 3455667777777777544
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=98.69 E-value=7.2e-08 Score=96.61 Aligned_cols=94 Identities=20% Similarity=0.233 Sum_probs=75.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|+|.|| |++|+.+++.|.+ .++|.+.+|+.++++.+. ..+..+..|+.|.+++.
T Consensus 15 ~~mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~--------------------~~~~~~~~d~~d~~~l~ 72 (365)
T 3abi_A 15 RHMKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK--------------------EFATPLKVDASNFDKLV 72 (365)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT--------------------TTSEEEECCTTCHHHHH
T ss_pred CccEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh--------------------ccCCcEEEecCCHHHHH
Confidence 4578999998 9999999998865 589999999987765431 45677889999999999
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
++++++|+|||+++... ...++++|.++|+ ++|=+|
T Consensus 73 ~~~~~~DvVi~~~p~~~----------------~~~v~~~~~~~g~-~yvD~s 108 (365)
T 3abi_A 73 EVMKEFELVIGALPGFL----------------GFKSIKAAIKSKV-DMVDVS 108 (365)
T ss_dssp HHHTTCSEEEECCCGGG----------------HHHHHHHHHHHTC-EEEECC
T ss_pred HHHhCCCEEEEecCCcc----------------cchHHHHHHhcCc-ceEeee
Confidence 99999999999987521 2357788888876 666554
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=98.60 E-value=4.3e-07 Score=79.14 Aligned_cols=76 Identities=13% Similarity=0.157 Sum_probs=61.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.++|+|+|+ |.+|+++++.|.+.|++|++++|++ ++.+.+.+.. ..++.++.+|.+|.+.+.
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~----------------~~~~~~i~gd~~~~~~l~ 65 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRL----------------GDNADVIPGDSNDSSVLK 65 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHH----------------CTTCEEEESCTTSHHHHH
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhh----------------cCCCeEEEcCCCCHHHHH
Confidence 457999995 9999999999999999999999984 4443332211 146889999999999998
Q ss_pred HH-hcCCCEEEEccc
Q 013273 159 PA-LGNASVVICCIG 172 (446)
Q Consensus 159 ~a-~~~~D~VI~~Ag 172 (446)
++ +.++|+||.+.+
T Consensus 66 ~a~i~~ad~vi~~~~ 80 (153)
T 1id1_A 66 KAGIDRCRAILALSD 80 (153)
T ss_dssp HHTTTTCSEEEECSS
T ss_pred HcChhhCCEEEEecC
Confidence 87 899999998865
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=98.57 E-value=5.1e-07 Score=84.05 Aligned_cols=176 Identities=11% Similarity=0.079 Sum_probs=99.5
Q ss_pred CCCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCC
Q 013273 78 KDDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141 (446)
Q Consensus 78 ~~~~~VlVtGa----------------tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~ 141 (446)
+.+++|||||| +|++|.+++++|+++|++|+++.|+... . ..
T Consensus 6 l~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~l-~---------------------~~ 63 (226)
T 1u7z_A 6 LKHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVSL-P---------------------TP 63 (226)
T ss_dssp TTTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCCC-C---------------------CC
T ss_pred CCCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCccc-c---------------------cC
Confidence 56789999999 7999999999999999999999886521 0 01
Q ss_pred CceEEEEcCCCChhcHHH----HhcCCCEEEEcccCCCCccCCC-C----C------cccchHHHHHHHHHHHHhC-CCC
Q 013273 142 EMLELVECDLEKRVQIEP----ALGNASVVICCIGASEKEVFDI-T----G------PYRIDFQATKNLVDAATIA-KVN 205 (446)
Q Consensus 142 ~~v~~v~~Dl~d~~~~~~----a~~~~D~VI~~Ag~~~~~~~~~-~----~------~~~vNv~g~~~l~~aa~~~-~v~ 205 (446)
.+++ ..|+.+.+++.+ .++++|++|||||..+...... . . .+.+.+.-+..++..+.+. ..+
T Consensus 64 ~g~~--~~dv~~~~~~~~~v~~~~~~~Dili~~Aav~d~~p~~~~~~KIkk~~~~~~~l~l~L~~~pdIL~~l~~~~~~~ 141 (226)
T 1u7z_A 64 PFVK--RVDVMTALEMEAAVNASVQQQNIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHR 141 (226)
T ss_dssp TTEE--EEECCSHHHHHHHHHHHGGGCSEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSC
T ss_pred CCCe--EEccCcHHHHHHHHHHhcCCCCEEEECCcccCCCCccCChHHhccccccCCceEEEEeecHHHHHHHHhhhcCC
Confidence 2343 367877655443 3478999999999754221111 0 0 1112222234456666553 223
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCC----ccCCCcccccccceeecccCcccCC
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG----MERPTDAYKETHNITLSQEDTLFGG 281 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~----v~gp~~~~~~~~~~~~~~~~~~~~~ 281 (446)
+| .|+-..- . +....|++ ..|.++|+++++..+-. -||...+ ....+...+.....
T Consensus 142 ~~-~VGFaaE-t--------~~l~e~A~------~kL~~k~~d~ivaN~~~~~~~~f~~~~n----~v~li~~~~~~~~~ 201 (226)
T 1u7z_A 142 PY-VVGFAAE-T--------NNVEEYAR------QKRIRKNLDLICANDVSQPTQGFNSDNN----ALHLFWQDGDKVLP 201 (226)
T ss_dssp CE-EEEEEEE-S--------SSHHHHHH------HHHHHHTCSEEEEEECSSTTSSTTSSEE----EEEEEETTEEEEEE
T ss_pred cE-EEEcchh-h--------chHHHHHH------HHHHhcCCCEEEEeeccccCCccCCCce----EEEEEeCCCcEecC
Confidence 33 2332211 1 11222322 33556899999988754 2332211 11112221121123
Q ss_pred ccCHHHHHHHHHHHHh
Q 013273 282 QVSNLQVAELLACMAK 297 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~ 297 (446)
..+-++||+.|+..+.
T Consensus 202 ~~sK~~vA~~I~~~i~ 217 (226)
T 1u7z_A 202 LERKELLGQLLLDEIV 217 (226)
T ss_dssp EEEHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 4678899998887764
|
| >5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A* | Back alignment and structure |
|---|
Probab=98.56 E-value=1.1e-07 Score=93.97 Aligned_cols=117 Identities=12% Similarity=0.075 Sum_probs=83.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--e-----EEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF--R-----VRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~--~-----V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
.++|+||||+|+||.+++..|+..|. + ++++++++ ++......++... .. +-+ .+
T Consensus 3 ~~kV~V~GaaG~VG~~la~~L~~~~~~~e~~~~~l~L~Di~~~~~~~~g~a~DL~~~----------~~--~~~----~~ 66 (333)
T 5mdh_A 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC----------AL--PLL----KD 66 (333)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------CC--TTE----EE
T ss_pred CeEEEEECCCCHHHHHHHHHHHhCCCccccCCCEEEEEeCCCccccchhhHhhhHhh----------hh--ccc----CC
Confidence 36899999999999999999998874 5 89998865 2444333333321 00 111 12
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC--EEEEEcc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN--HFIMVSS 212 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~--r~V~vSS 212 (446)
+.......+.+.++|+||++||.......+....++.|+....++++++++.+.+ +||.+|.
T Consensus 67 ~~~~~~~~~~~~daDvVvitAg~prkpG~tR~dll~~N~~i~~~i~~~i~~~~~~~~~vivvsN 130 (333)
T 5mdh_A 67 VIATDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVGN 130 (333)
T ss_dssp EEEESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred EEEcCCcHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCC
Confidence 2223446778999999999999765544555667889999999999999988764 5777775
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=98.53 E-value=2.1e-07 Score=96.23 Aligned_cols=116 Identities=16% Similarity=0.214 Sum_probs=82.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|+|+ |++|+.+++.|++. |++|++++|+.++.+.+.+. .++.++.+|+.|.++
T Consensus 21 l~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~------------------~~~~~~~~D~~d~~~ 81 (467)
T 2axq_A 21 HMGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKP------------------SGSKAISLDVTDDSA 81 (467)
T ss_dssp --CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGG------------------GTCEEEECCTTCHHH
T ss_pred CCCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHh------------------cCCcEEEEecCCHHH
Confidence 45678999997 99999999999998 78999999998877665321 246778899999989
Q ss_pred HHHHhcCCCEEEEcccCCCCcc------CCCCCcccchH--HHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 157 IEPALGNASVVICCIGASEKEV------FDITGPYRIDF--QATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~------~~~~~~~~vNv--~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
+.+++.++|+||||++...... ..-..++++++ .....++++|+++|+ . .++..+.
T Consensus 82 l~~~l~~~DvVIn~tp~~~~~~v~~a~l~~g~~vvd~~~~~p~~~~Ll~~Ak~aGv-~--~i~g~G~ 145 (467)
T 2axq_A 82 LDKVLADNDVVISLIPYTFHPNVVKSAIRTKTDVVTSSYISPALRELEPEIVKAGI-T--VMNEIGL 145 (467)
T ss_dssp HHHHHHTSSEEEECSCGGGHHHHHHHHHHHTCEEEECSCCCHHHHHHHHHHHHHTC-E--EECSCBB
T ss_pred HHHHHcCCCEEEECCchhhhHHHHHHHHhcCCEEEEeecCCHHHHHHHHHHHHcCC-E--EEecCCc
Confidence 9999999999999998642110 00012233332 345778888888886 2 3444443
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.53 E-value=3.7e-07 Score=81.91 Aligned_cols=139 Identities=12% Similarity=0.059 Sum_probs=89.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|+|+| .|.+|+.+++.|.+. |++|++++|++++...+.+ .++.++.+|.+|.+.+
T Consensus 38 ~~~~v~IiG-~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~-------------------~g~~~~~gd~~~~~~l 97 (183)
T 3c85_A 38 GHAQVLILG-MGRIGTGAYDELRARYGKISLGIEIREEAAQQHRS-------------------EGRNVISGDATDPDFW 97 (183)
T ss_dssp TTCSEEEEC-CSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH-------------------TTCCEEECCTTCHHHH
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH-------------------CCCCEEEcCCCCHHHH
Confidence 356799999 699999999999999 9999999999887665432 3467788999998888
Q ss_pred HHH--hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CCEEEEEccccccCCCCch-hhh-chhhHHH
Q 013273 158 EPA--LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VNHFIMVSSLGTNKFGFPA-AIL-NLFWGVL 232 (446)
Q Consensus 158 ~~a--~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~r~V~vSS~~~~~~~~~~-~~~-~~~~~Y~ 232 (446)
.++ +.++|+||.+.+. ......++..+++.+ ..++|.............. ... -....+.
T Consensus 98 ~~~~~~~~ad~vi~~~~~---------------~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~ 162 (183)
T 3c85_A 98 ERILDTGHVKLVLLAMPH---------------HQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSE 162 (183)
T ss_dssp HTBCSCCCCCEEEECCSS---------------HHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHH
T ss_pred HhccCCCCCCEEEEeCCC---------------hHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHH
Confidence 877 7889999998653 122344556666665 3355443221000000000 000 0011245
Q ss_pred HHHHHHHHHHHhCCCCEEEE
Q 013273 233 LWKRKAEEALIASGLPYTIV 252 (446)
Q Consensus 233 ~sK~~~E~~l~~~gl~~tiv 252 (446)
.++..++.+++..+..++++
T Consensus 163 ~a~~l~~~~~~~~~~~~~~~ 182 (183)
T 3c85_A 163 AGSGFARHVCKQLEPQFTSI 182 (183)
T ss_dssp HHHHHHHHHHHHHCCCCCCC
T ss_pred HHHHHHHHHHHhcCCccccc
Confidence 56677777777777766654
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=98.53 E-value=6.7e-07 Score=78.15 Aligned_cols=101 Identities=14% Similarity=0.057 Sum_probs=74.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |.+|+.+++.|.+.|++|++++|++++...+. ...++.++.+|..+.+.+
T Consensus 17 ~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~------------------~~~g~~~~~~d~~~~~~l 77 (155)
T 2g1u_A 17 QKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLN------------------SEFSGFTVVGDAAEFETL 77 (155)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSC------------------TTCCSEEEESCTTSHHHH
T ss_pred cCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHH------------------hcCCCcEEEecCCCHHHH
Confidence 34578999995 99999999999999999999999987654321 013466788999888777
Q ss_pred HHH-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh-CCCCEEEEEcc
Q 013273 158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~-~~v~r~V~vSS 212 (446)
.++ +.++|+||.+.+.. .....+++.++. .+..++|...+
T Consensus 78 ~~~~~~~ad~Vi~~~~~~---------------~~~~~~~~~~~~~~~~~~iv~~~~ 119 (155)
T 2g1u_A 78 KECGMEKADMVFAFTNDD---------------STNFFISMNARYMFNVENVIARVY 119 (155)
T ss_dssp HTTTGGGCSEEEECSSCH---------------HHHHHHHHHHHHTSCCSEEEEECS
T ss_pred HHcCcccCCEEEEEeCCc---------------HHHHHHHHHHHHHCCCCeEEEEEC
Confidence 765 78899999997631 123345556666 56666666554
|
| >1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A* | Back alignment and structure |
|---|
Probab=98.46 E-value=6.1e-07 Score=88.01 Aligned_cols=115 Identities=14% Similarity=0.084 Sum_probs=79.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|+|+||+|++|..++..|+..| .+|+++++++ .......+.. . ....++....+ ..+++
T Consensus 1 mKI~IiGa~G~VG~~la~~L~~~~~~~ev~L~Di~~--~~~~a~dL~~----------~-~~~~~l~~~~~----t~d~~ 63 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAH--TPGVAADLSH----------I-ETRATVKGYLG----PEQLP 63 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSS--HHHHHHHHTT----------S-SSSCEEEEEES----GGGHH
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCcEEEEEeCCc--cHHHHHHHhc----------c-CcCceEEEecC----CCCHH
Confidence 589999999999999999999988 7999999987 2221112211 1 11112222211 13577
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+++.++|+||+++|.......+....+..|+.....+++.+++.+.. +||++|.
T Consensus 64 ~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~sN 118 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIISN 118 (314)
T ss_dssp HHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred HHhCCCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEECC
Confidence 88999999999999765433333445678999999999999887543 6777654
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=98.41 E-value=2.6e-06 Score=78.67 Aligned_cols=96 Identities=10% Similarity=0.116 Sum_probs=73.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|+|+ |.+|+++++.|.+.|++|+++++++++.+.+.+. .++.++.+|.+|.+.+.++
T Consensus 1 M~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~------------------~~~~~i~gd~~~~~~l~~a 61 (218)
T 3l4b_C 1 MKVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK------------------LKATIIHGDGSHKEILRDA 61 (218)
T ss_dssp CCEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH------------------SSSEEEESCTTSHHHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH------------------cCCeEEEcCCCCHHHHHhc
Confidence 57999995 9999999999999999999999999877654321 3578899999999999887
Q ss_pred -hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh-CCCCEEEEE
Q 013273 161 -LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI-AKVNHFIMV 210 (446)
Q Consensus 161 -~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~-~~v~r~V~v 210 (446)
+.++|+||.+.+.. .. ...++..+++ .+..++|-.
T Consensus 62 ~i~~ad~vi~~~~~d-----------~~----n~~~~~~a~~~~~~~~iia~ 98 (218)
T 3l4b_C 62 EVSKNDVVVILTPRD-----------EV----NLFIAQLVMKDFGVKRVVSL 98 (218)
T ss_dssp TCCTTCEEEECCSCH-----------HH----HHHHHHHHHHTSCCCEEEEC
T ss_pred CcccCCEEEEecCCc-----------HH----HHHHHHHHHHHcCCCeEEEE
Confidence 78999999876431 11 2334455555 566676643
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=98.41 E-value=8.3e-07 Score=82.86 Aligned_cols=75 Identities=17% Similarity=0.283 Sum_probs=54.7
Q ss_pred CCCEEEEECC----------------CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCC
Q 013273 79 DDNLAFVAGA----------------TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142 (446)
Q Consensus 79 ~~~~VlVtGa----------------tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~ 142 (446)
.+++|||||| +|++|.+++++|+++|++|+++.|...... ....
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~--------------------~~~~ 61 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP--------------------EPHP 61 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC--------------------CCCT
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc--------------------cCCC
Confidence 4689999999 999999999999999999999999753100 0013
Q ss_pred ceEEEEcCCCChhc----HHHHhcCCCEEEEcccCCC
Q 013273 143 MLELVECDLEKRVQ----IEPALGNASVVICCIGASE 175 (446)
Q Consensus 143 ~v~~v~~Dl~d~~~----~~~a~~~~D~VI~~Ag~~~ 175 (446)
++.++ |+...++ +.+.++++|++|||||..+
T Consensus 62 ~~~~~--~v~s~~em~~~v~~~~~~~Dili~aAAvsD 96 (232)
T 2gk4_A 62 NLSIR--EITNTKDLLIEMQERVQDYQVLIHSMAVSD 96 (232)
T ss_dssp TEEEE--ECCSHHHHHHHHHHHGGGCSEEEECSBCCS
T ss_pred CeEEE--EHhHHHHHHHHHHHhcCCCCEEEEcCcccc
Confidence 45555 4444333 3344578999999999754
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=98.29 E-value=3.6e-06 Score=72.18 Aligned_cols=74 Identities=24% Similarity=0.197 Sum_probs=62.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+ .++.++.+|.++.+.+++
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~-------------------~g~~~i~gd~~~~~~l~~ 66 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE-------------------RGVRAVLGNAANEEIMQL 66 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH-------------------TTCEEEESCTTSHHHHHH
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH-------------------cCCCEEECCCCCHHHHHh
Confidence 457999995 999999999999999999999999987766532 467889999999988876
Q ss_pred H-hcCCCEEEEcccC
Q 013273 160 A-LGNASVVICCIGA 173 (446)
Q Consensus 160 a-~~~~D~VI~~Ag~ 173 (446)
+ +.++|+||.+.+.
T Consensus 67 a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 67 AHLECAKWLILTIPN 81 (140)
T ss_dssp TTGGGCSEEEECCSC
T ss_pred cCcccCCEEEEECCC
Confidence 5 5789999988653
|
| >3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=98.21 E-value=2.2e-06 Score=84.92 Aligned_cols=118 Identities=14% Similarity=0.102 Sum_probs=80.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++|.|+|++|+||..++..|+..| .+|++++++.++.+.....+... .+...++.+ ..
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~~k~~g~a~DL~~~----------~~~~~~i~~-------t~ 68 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFAVGLEGVAEEIRHC----------GFEGLNLTF-------TS 68 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCHHHHHHHHHHHHHH----------CCTTCCCEE-------ES
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCchhHHHHHHhhhhC----------cCCCCceEE-------cC
Confidence 346799999999999999999999998 58999999888776554444432 011122222 23
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE--EEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH--FIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r--~V~vSS 212 (446)
++.++++++|+||.+||.......+....+..|+.....+++.+.+.+.+- ++.+|.
T Consensus 69 d~~~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsN 127 (343)
T 3fi9_A 69 DIKEALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFN 127 (343)
T ss_dssp CHHHHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSS
T ss_pred CHHHHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecC
Confidence 567789999999999997544333333346778899999999998875443 455553
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=98.20 E-value=7.4e-06 Score=80.19 Aligned_cols=81 Identities=15% Similarity=0.152 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC---chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~---~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+++++|+|+ |++|+.++..|++.|. +|+++.|+ .++++.+.+++... ....+...++.+
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~--------------~~~~~~~~~~~~ 216 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSK--------------TDCKAQLFDIED 216 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH--------------SSCEEEEEETTC
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhh--------------cCCceEEeccch
Confidence 46789999996 8999999999999998 89999999 77777777666542 223444457777
Q ss_pred hhcHHHHhcCCCEEEEcccC
Q 013273 154 RVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~ 173 (446)
.+.+.+.+.++|+|||+...
T Consensus 217 ~~~l~~~l~~aDiIINaTp~ 236 (315)
T 3tnl_A 217 HEQLRKEIAESVIFTNATGV 236 (315)
T ss_dssp HHHHHHHHHTCSEEEECSST
T ss_pred HHHHHhhhcCCCEEEECccC
Confidence 77788889999999999764
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=98.10 E-value=3.7e-06 Score=76.17 Aligned_cols=98 Identities=20% Similarity=0.210 Sum_probs=65.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|+|+||+|+||..+++.+...|++|++++|++++.+.+. ++ | ... ..|+.+.+..+
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~----~~---------g------~~~-~~d~~~~~~~~ 97 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS----RL---------G------VEY-VGDSRSVDFAD 97 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH----TT---------C------CSE-EEETTCSTHHH
T ss_pred CCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc---------C------CCE-EeeCCcHHHHH
Confidence 4678999999999999999999999999999999877654331 11 1 111 23666544333
Q ss_pred ---HHh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 159 ---PAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 159 ---~a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+.. .++|+||||+|.. ....+++.++.. +++|.+++..
T Consensus 98 ~~~~~~~~~~~D~vi~~~g~~----------------~~~~~~~~l~~~--G~~v~~g~~~ 140 (198)
T 1pqw_A 98 EILELTDGYGVDVVLNSLAGE----------------AIQRGVQILAPG--GRFIELGKKD 140 (198)
T ss_dssp HHHHHTTTCCEEEEEECCCTH----------------HHHHHHHTEEEE--EEEEECSCGG
T ss_pred HHHHHhCCCCCeEEEECCchH----------------HHHHHHHHhccC--CEEEEEcCCC
Confidence 333 2589999998731 122333433332 4899988754
|
| >3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2e-05 Score=77.48 Aligned_cols=118 Identities=18% Similarity=0.156 Sum_probs=81.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...++|.|+|+ |++|..++..|+..|. +|+++++++++.+.....+... .. .....+.+...|
T Consensus 3 ~~~~kI~ViGa-G~vG~~~a~~l~~~~~~~~l~l~D~~~~k~~g~a~DL~~~-~~--------~~~~~v~i~~~~----- 67 (326)
T 3pqe_A 3 KHVNKVALIGA-GFVGSSYAFALINQGITDELVVIDVNKEKAMGDVMDLNHG-KA--------FAPQPVKTSYGT----- 67 (326)
T ss_dssp CSCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHT-GG--------GSSSCCEEEEEC-----
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHHHHHhc-cc--------cccCCeEEEeCc-----
Confidence 34579999995 9999999999999986 8999999988777655445432 11 001234444333
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.+++.++|+||.++|.......+....+..|......+++.+.+.+.+ .++.+|.
T Consensus 68 --~~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 68 --YEDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp --GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred --HHHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 246889999999999754332222334667888889999999887544 4555553
|
| >2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A | Back alignment and structure |
|---|
Probab=98.05 E-value=1.4e-05 Score=74.42 Aligned_cols=72 Identities=18% Similarity=0.139 Sum_probs=60.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
..++|+|+|+ |.+|+.+++.|.+.|+ |++++|+++....+. .++.++.+|.+|.+.+.
T Consensus 8 ~~~~viI~G~-G~~G~~la~~L~~~g~-v~vid~~~~~~~~~~--------------------~~~~~i~gd~~~~~~l~ 65 (234)
T 2aef_A 8 KSRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKKVLR--------------------SGANFVHGDPTRVSDLE 65 (234)
T ss_dssp --CEEEEESC-CHHHHHHHHHSTTSEE-EEEESCGGGHHHHHH--------------------TTCEEEESCTTCHHHHH
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCe-EEEEECCHHHHHHHh--------------------cCCeEEEcCCCCHHHHH
Confidence 3468999996 9999999999999999 999999987665431 24789999999999888
Q ss_pred HH-hcCCCEEEEccc
Q 013273 159 PA-LGNASVVICCIG 172 (446)
Q Consensus 159 ~a-~~~~D~VI~~Ag 172 (446)
++ +.++|.||.+.+
T Consensus 66 ~a~i~~ad~vi~~~~ 80 (234)
T 2aef_A 66 KANVRGARAVIVDLE 80 (234)
T ss_dssp HTTCTTCSEEEECCS
T ss_pred hcCcchhcEEEEcCC
Confidence 77 789999998864
|
| >3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=98.04 E-value=3e-05 Score=76.19 Aligned_cols=117 Identities=15% Similarity=0.175 Sum_probs=73.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..+++|.|+|+ |++|..++..|+..|. +|+++++++++++.....+.... .....+.+...|
T Consensus 7 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~----------~~~~~~~i~~~~----- 70 (326)
T 3vku_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDAL----------PFTSPKKIYSAE----- 70 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----------GGSCCCEEEECC-----
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhhh----------hhcCCcEEEECc-----
Confidence 45679999996 9999999999999886 89999999887776555554320 001234444332
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.+++.++|+||++||.......+....++.|..-...+++.+.+.+.+ .++.+|.
T Consensus 71 --~~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN 126 (326)
T 3vku_A 71 --YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN 126 (326)
T ss_dssp --GGGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS
T ss_pred --HHHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC
Confidence 346889999999999765443344455778888899999999887544 4555543
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=1.3e-05 Score=73.39 Aligned_cols=73 Identities=19% Similarity=0.307 Sum_probs=54.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|+||+|++|+.+++.|++.|++|++++|++++.+.+.+.+... + . ..|+. ..++.++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~-~------------~-----~~~~~-~~~~~~~ 61 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI-A------------G-----DASIT-GMKNEDA 61 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH-H------------S-----SCCEE-EEEHHHH
T ss_pred CeEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-c------------c-----cCCCC-hhhHHHH
Confidence 47999999999999999999999999999999988776654432210 0 0 01222 2356677
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||++..
T Consensus 62 ~~~~D~Vi~~~~ 73 (212)
T 1jay_A 62 AEACDIAVLTIP 73 (212)
T ss_dssp HHHCSEEEECSC
T ss_pred HhcCCEEEEeCC
Confidence 888999999975
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=97.93 E-value=6.7e-05 Score=70.90 Aligned_cols=106 Identities=15% Similarity=0.271 Sum_probs=75.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
.+++|+|.| .|++|+.+++.|++.|. +|++++++. .+.+.+.+.+..+
T Consensus 30 ~~~~VlVvG-~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~----------- 97 (249)
T 1jw9_B 30 KDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI----------- 97 (249)
T ss_dssp HHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred hCCeEEEEe-eCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHH-----------
Confidence 456899999 59999999999999996 899999987 7777777776654
Q ss_pred CCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+++.+..++.+ +.+.+.+.++|+||++... ...-..+.++|.+.++ .+|+.+..
T Consensus 98 np~~~v~~~~~~~~~-~~~~~~~~~~DvVi~~~d~---------------~~~~~~l~~~~~~~~~-p~i~~~~~ 155 (249)
T 1jw9_B 98 NPHIAITPVNALLDD-AELAALIAEHDLVLDCTDN---------------VAVRNQLNAGCFAAKV-PLVSGAAI 155 (249)
T ss_dssp CTTSEEEEECSCCCH-HHHHHHHHTSSEEEECCSS---------------HHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred CCCcEEEEEeccCCH-hHHHHHHhCCCEEEEeCCC---------------HHHHHHHHHHHHHcCC-CEEEeeec
Confidence 111245566666653 5567788999999998532 2233456677777775 56666543
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.93 E-value=1.5e-05 Score=76.32 Aligned_cols=76 Identities=20% Similarity=0.259 Sum_probs=55.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |++|+.++..|++.|++|+++.|+.++.+.+.+.+... ..+. ..|+ +++
T Consensus 117 l~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~--------------~~~~--~~~~---~~~ 176 (271)
T 1nyt_A 117 RPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQ--ALSM---DEL 176 (271)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEE--ECCS---GGG
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhcc--------------CCee--EecH---HHh
Confidence 45689999997 88999999999999999999999998877765543210 1222 2333 233
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
.+ +++|+||||++...
T Consensus 177 ~~--~~~DivVn~t~~~~ 192 (271)
T 1nyt_A 177 EG--HEFDLIINATSSGI 192 (271)
T ss_dssp TT--CCCSEEEECCSCGG
T ss_pred cc--CCCCEEEECCCCCC
Confidence 22 68999999998643
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=4.8e-05 Score=74.27 Aligned_cols=82 Identities=15% Similarity=0.154 Sum_probs=61.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC---chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS---VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~---~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+++++|+|+ |++|+.++..|++.|. +|+++.|+ .++++.+.+++... ....+...++.+
T Consensus 146 l~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~--------------~~~~v~~~~~~~ 210 (312)
T 3t4e_A 146 MRGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNEN--------------TDCVVTVTDLAD 210 (312)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHH--------------SSCEEEEEETTC
T ss_pred cCCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhc--------------cCcceEEechHh
Confidence 45789999996 9999999999999997 89999999 77777776665432 123333445555
Q ss_pred hhcHHHHhcCCCEEEEcccCC
Q 013273 154 RVQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~ 174 (446)
.+.+.+.+.++|+|||+....
T Consensus 211 l~~~~~~l~~~DiIINaTp~G 231 (312)
T 3t4e_A 211 QHAFTEALASADILTNGTKVG 231 (312)
T ss_dssp HHHHHHHHHHCSEEEECSSTT
T ss_pred hhhhHhhccCceEEEECCcCC
Confidence 444566778899999997643
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=2.6e-05 Score=76.64 Aligned_cols=76 Identities=22% Similarity=0.291 Sum_probs=55.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||+||+|+||..+++.+...|++|++++|++++.+.+ + ++ | .. ...|+.+.+++
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~---~~---------g------~~-~~~d~~~~~~~ 203 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-K---QI---------G------FD-AAFNYKTVNSL 203 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-H---HT---------T------CS-EEEETTSCSCH
T ss_pred CCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H---hc---------C------Cc-EEEecCCHHHH
Confidence 3567999999999999999999999999999999988766544 2 11 1 11 12477663444
Q ss_pred HHHh-----cCCCEEEEcccC
Q 013273 158 EPAL-----GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~-----~~~D~VI~~Ag~ 173 (446)
.+.+ +++|+||||+|.
T Consensus 204 ~~~~~~~~~~~~d~vi~~~g~ 224 (333)
T 1v3u_A 204 EEALKKASPDGYDCYFDNVGG 224 (333)
T ss_dssp HHHHHHHCTTCEEEEEESSCH
T ss_pred HHHHHHHhCCCCeEEEECCCh
Confidence 4333 369999999983
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.89 E-value=3.2e-05 Score=76.44 Aligned_cols=76 Identities=26% Similarity=0.281 Sum_probs=56.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | ... ..|+.+.+++
T Consensus 168 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~~----~---------g------~~~-~~d~~~~~~~ 227 (347)
T 2hcy_A 168 MAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS----I---------G------GEV-FIDFTKEKDI 227 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHH----T---------T------CCE-EEETTTCSCH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHHH----c---------C------Cce-EEecCccHhH
Confidence 356799999999999999999999999999999998877644321 1 1 111 2377654455
Q ss_pred HHHh-----cCCCEEEEcccC
Q 013273 158 EPAL-----GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~-----~~~D~VI~~Ag~ 173 (446)
.+.+ +++|+||+++|.
T Consensus 228 ~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 228 VGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp HHHHHHHHTSCEEEEEECSSC
T ss_pred HHHHHHHhCCCCCEEEECCCc
Confidence 4443 269999999874
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=6.1e-05 Score=76.52 Aligned_cols=73 Identities=25% Similarity=0.251 Sum_probs=63.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|+|.|. |.+|+.+++.|.+.|++|+++++++++.+.+.+ .++.++.+|.++.+.+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~-------------------~g~~vi~GDat~~~~L~~ 63 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK-------------------FGMKVFYGDATRMDLLES 63 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH-------------------TTCCCEESCTTCHHHHHH
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh-------------------CCCeEEEcCCCCHHHHHh
Confidence 357999995 999999999999999999999999988766532 457789999999999888
Q ss_pred H-hcCCCEEEEccc
Q 013273 160 A-LGNASVVICCIG 172 (446)
Q Consensus 160 a-~~~~D~VI~~Ag 172 (446)
+ +.++|+||.+.+
T Consensus 64 agi~~A~~viv~~~ 77 (413)
T 3l9w_A 64 AGAAKAEVLINAID 77 (413)
T ss_dssp TTTTTCSEEEECCS
T ss_pred cCCCccCEEEECCC
Confidence 7 789999998864
|
| >1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A* | Back alignment and structure |
|---|
Probab=97.89 E-value=1.6e-05 Score=77.72 Aligned_cols=116 Identities=16% Similarity=0.093 Sum_probs=73.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.....+....... . ...++... .| + +
T Consensus 3 ~kI~VIGa-G~vG~~~a~~la~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~-----~--~~~~i~~t-~d------~-~ 66 (309)
T 1ur5_A 3 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIE-----G--FDVRVTGT-NN------Y-A 66 (309)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSSSHHHHHHHHHHTTHHHH-----T--CCCCEEEE-SC------G-G
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCeEEEEeCCccHHHHHHHhHHHhHhhc-----C--CCeEEEEC-CC------H-H
Confidence 68999998 9999999999999996 99999998877765443333210000 0 00122221 22 3 4
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+++++|+||.++|...............|......+++.+.+.+...+|.+.|
T Consensus 67 a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 119 (309)
T 1ur5_A 67 DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMVN 119 (309)
T ss_dssp GGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEECC
T ss_pred HHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEcC
Confidence 58899999999987543322222234557777788888888876555655555
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.89 E-value=2e-05 Score=78.84 Aligned_cols=77 Identities=18% Similarity=0.211 Sum_probs=60.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |.||+.+++.|...|++|++++|++++.+.+.+.+ + .. +.+|..+.+++
T Consensus 164 l~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~------------g----~~---~~~~~~~~~~l 223 (369)
T 2eez_A 164 VAPASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF------------G----GR---VITLTATEANI 223 (369)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------------T----TS---EEEEECCHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc------------C----ce---EEEecCCHHHH
Confidence 45689999998 99999999999999999999999987765543211 1 11 34577778888
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+++.++|+||+|++..
T Consensus 224 ~~~~~~~DvVi~~~g~~ 240 (369)
T 2eez_A 224 KKSVQHADLLIGAVLVP 240 (369)
T ss_dssp HHHHHHCSEEEECCC--
T ss_pred HHHHhCCCEEEECCCCC
Confidence 89999999999999864
|
| >3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=2.7e-05 Score=76.54 Aligned_cols=118 Identities=14% Similarity=0.082 Sum_probs=78.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhh-cccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKL-DGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l-~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++|.|+|+ |.+|..++..|+..|+ +|+++++++++.+....++..... .+ ...++.. ..|
T Consensus 5 m~~~kI~viGa-G~vG~~~a~~l~~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~--------~~~~v~~-t~d----- 69 (324)
T 3gvi_A 5 MARNKIALIGS-GMIGGTLAHLAGLKELGDVVLFDIAEGTPQGKGLDIAESSPVDG--------FDAKFTG-AND----- 69 (324)
T ss_dssp -CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHHHHHHHT--------CCCCEEE-ESS-----
T ss_pred CcCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCchhHHHHHHHHhchhhhcC--------CCCEEEE-eCC-----
Confidence 34679999997 9999999999999998 999999999877654444433210 00 0012221 122
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
. ++++++|+||.++|............+..|......+++.+.+.+.. .||.+|.
T Consensus 70 -~-~a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 70 -Y-AAIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp -G-GGGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred -H-HHHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 2 57899999999999754433333344667888888888888876543 5666554
|
| >1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=4.8e-05 Score=74.98 Aligned_cols=118 Identities=13% Similarity=0.033 Sum_probs=76.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.++|.|+|| |.+|..++..|+..|+ +|+++++++++.+.....+.... .. .+ ...++.+. .+++
T Consensus 9 ~~kI~VIGa-G~vG~~lA~~la~~g~~~V~L~D~~~~~~~~~~~~l~~~~-~~----~~--~~~~i~~t-------~d~~ 73 (331)
T 1pzg_A 9 RKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVT-SV----VD--TNVSVRAE-------YSYE 73 (331)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHH-HH----TT--CCCCEEEE-------CSHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECChhHHHHHHHHHHhhh-hc----cC--CCCEEEEe-------CCHH
Confidence 468999997 9999999999999998 99999999887766433332210 00 00 01223221 3456
Q ss_pred HHhcCCCEEEEcccCCCCccC-----CCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~-----~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+++.++|+||.++|....... ........|......+++.+.+....-+|.+.|
T Consensus 74 ea~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~~t 132 (331)
T 1pzg_A 74 AALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 132 (331)
T ss_dssp HHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred HHhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEEc
Confidence 688999999999986543222 122234456777788888887764443443444
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.81 E-value=6e-05 Score=72.65 Aligned_cols=79 Identities=20% Similarity=0.243 Sum_probs=61.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++|+|+ |++|+.++..|++.|. +|++++|+.++.+.+.+.+.... ..+.+...++ ++
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~-------------~~~~i~~~~~---~~ 187 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAV-------------GREAVVGVDA---RG 187 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHH-------------TSCCEEEECS---TT
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhc-------------CCceEEEcCH---HH
Confidence 46789999997 9999999999999998 79999999999988877765431 2233333443 34
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+.+.++|+|||+...
T Consensus 188 l~~~l~~~DiVInaTp~ 204 (283)
T 3jyo_A 188 IEDVIAAADGVVNATPM 204 (283)
T ss_dssp HHHHHHHSSEEEECSST
T ss_pred HHHHHhcCCEEEECCCC
Confidence 66778889999999764
|
| >3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00012 Score=71.66 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=78.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC--chhHHHHHHHHHHhh-hcccccccCCCCCCceEEEEcCCC
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS--VQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~--~~~~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
++..++|.|+|+ |.+|..++..|+..|+ +|++++++ +.+.+.....+.... +.+ ...++.. ..|
T Consensus 5 ~~~~~kv~ViGa-G~vG~~ia~~l~~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~--------~~~~i~~-t~d-- 72 (315)
T 3tl2_A 5 TIKRKKVSVIGA-GFTGATTAFLLAQKELADVVLVDIPQLENPTKGKALDMLEASPVQG--------FDANIIG-TSD-- 72 (315)
T ss_dssp CCCCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHT--------CCCCEEE-ESC--
T ss_pred ccCCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccchHHHHHHhhhhHHHhhhhcc--------CCCEEEE-cCC--
Confidence 345679999996 9999999999999999 99999998 555554433333210 000 0012222 112
Q ss_pred ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 153 KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.++++++|+||.++|.......+....+..|......+++.+.+.+.. .++.+|.
T Consensus 73 -----~~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 73 -----YADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp -----GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred -----HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 246899999999999765433333344667888888899888876544 5555553
|
| >1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=97.80 E-value=2.4e-05 Score=75.45 Aligned_cols=80 Identities=19% Similarity=0.241 Sum_probs=56.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++|+|+ |++|+.+++.|++.| +|++++|+.++.+.+.+.+.... + ... .+.+|+.+ +
T Consensus 126 l~~k~vlV~Ga-GgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~--------~----~~~-~~~~d~~~---~ 187 (287)
T 1nvt_A 126 VKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKL--------N----KKF-GEEVKFSG---L 187 (287)
T ss_dssp CCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHH--------T----CCH-HHHEEEEC---T
T ss_pred cCCCEEEEECc-hHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhc--------c----ccc-ceeEEEee---H
Confidence 45689999997 599999999999999 99999999888877766554310 0 000 01123333 2
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
.+.++++|+||||+|...
T Consensus 188 ~~~~~~~DilVn~ag~~~ 205 (287)
T 1nvt_A 188 DVDLDGVDIIINATPIGM 205 (287)
T ss_dssp TCCCTTCCEEEECSCTTC
T ss_pred HHhhCCCCEEEECCCCCC
Confidence 445678999999998643
|
| >4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ... | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00018 Score=70.86 Aligned_cols=118 Identities=14% Similarity=0.136 Sum_probs=83.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...++|.|+|+ |.+|..++..|+..|. +|++++++.++++....++.... .+. ....++..+ |
T Consensus 17 ~~~~kV~ViGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~a~DL~~~~---------~~~-~~~~i~~~~--d-- 81 (331)
T 4aj2_A 17 VPQNKITVVGV-GAVGMACAISILMKDLADELALVDVIEDKLKGEMMDLQHGS---------LFL-KTPKIVSSK--D-- 81 (331)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTG---------GGC-SCCEEEECS--S--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCceEEEEeCChHHHHHHHHhhhhhh---------hcc-CCCeEEEcC--C--
Confidence 45679999997 9999999999999986 89999999887776655554320 000 122233221 2
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.+ .++++|+||.+||............+..|..-...+++.+.+.+.. .++.+|.
T Consensus 82 -~~-~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 82 -YS-VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp -GG-GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred -HH-HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 22 5889999999999765544445566788999999999999887443 5665554
|
| >1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00026 Score=69.33 Aligned_cols=116 Identities=12% Similarity=0.134 Sum_probs=76.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.++|.|+|| |.+|..++..|+..+. +|+++++++++++.....+.... .. ...+.+.. | +
T Consensus 3 ~~~~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~---------~~-~~~~~v~~-~--~-- 66 (318)
T 1ez4_A 3 PNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQ---------AF-TAPKKIYS-G--E-- 66 (318)
T ss_dssp TTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGG---------GG-SCCCEEEE-C--C--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHHH---------Hh-cCCeEEEE-C--C--
Confidence 34579999998 9999999999998875 89999998877776555444321 00 12344432 2 1
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
.+++.++|+||..+|........-...+..|......+++.+.+.+.. .+|.+|
T Consensus 67 --~~a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 121 (318)
T 1ez4_A 67 --YSDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (318)
T ss_dssp --GGGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred --HHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeC
Confidence 455899999999999754433333345677888899999998887543 455554
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.75 E-value=1.9e-05 Score=67.90 Aligned_cols=71 Identities=18% Similarity=0.288 Sum_probs=55.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|+|+|+ |.+|+.+++.|.+.|++|++.+|+.++.+.+.+.+ + +.+. ..+++.+
T Consensus 21 ~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~-----------------~-~~~~-----~~~~~~~ 76 (144)
T 3oj0_A 21 GNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKY-----------------E-YEYV-----LINDIDS 76 (144)
T ss_dssp CCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHH-----------------T-CEEE-----ECSCHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHh-----------------C-CceE-----eecCHHH
Confidence 678999995 99999999999999999999999998877655432 1 2221 2345677
Q ss_pred HhcCCCEEEEcccCC
Q 013273 160 ALGNASVVICCIGAS 174 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~ 174 (446)
++.++|+||++.+..
T Consensus 77 ~~~~~Divi~at~~~ 91 (144)
T 3oj0_A 77 LIKNNDVIITATSSK 91 (144)
T ss_dssp HHHTCSEEEECSCCS
T ss_pred HhcCCCEEEEeCCCC
Confidence 788999999998754
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.74 E-value=3.1e-05 Score=75.81 Aligned_cols=75 Identities=21% Similarity=0.285 Sum_probs=54.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .. .+ .|..+.+..
T Consensus 139 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~----~---------g----~~-~~--~~~~~~~~~ 198 (327)
T 1qor_A 139 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----A---------G----AW-QV--INYREEDLV 198 (327)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTTSCHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----c---------C----CC-EE--EECCCccHH
Confidence 356799999999999999999999999999999999877654432 1 1 11 12 355554333
Q ss_pred H---HHh--cCCCEEEEccc
Q 013273 158 E---PAL--GNASVVICCIG 172 (446)
Q Consensus 158 ~---~a~--~~~D~VI~~Ag 172 (446)
+ +.. .++|+||||+|
T Consensus 199 ~~~~~~~~~~~~D~vi~~~g 218 (327)
T 1qor_A 199 ERLKEITGGKKVRVVYDSVG 218 (327)
T ss_dssp HHHHHHTTTCCEEEEEECSC
T ss_pred HHHHHHhCCCCceEEEECCc
Confidence 3 333 26899999998
|
| >3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.0002 Score=70.29 Aligned_cols=117 Identities=14% Similarity=0.072 Sum_probs=78.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|.|+| +|.+|..++..|+..|. +|+++++++++.+.....+...... ......+...+ |
T Consensus 4 ~~~kI~iiG-aG~vG~~~a~~l~~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~---------~~~~~~v~~t~--d---- 67 (321)
T 3p7m_A 4 ARKKITLVG-AGNIGGTLAHLALIKQLGDVVLFDIAQGMPNGKALDLLQTCPI---------EGVDFKVRGTN--D---- 67 (321)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTTHHH---------HTCCCCEEEES--C----
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhCCCceEEEEeCChHHHHHHHHHHHhhhhh---------cCCCcEEEEcC--C----
Confidence 457899999 59999999999999987 9999999998776544444432100 00122222111 1
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
.++++++|+||.++|............+..|......+++.+.+.... .+|.+|
T Consensus 68 ~~a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt 122 (321)
T 3p7m_A 68 YKDLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT 122 (321)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred HHHHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec
Confidence 257889999999998754332222233566888888888888877544 555554
|
| >1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A* | Back alignment and structure |
|---|
Probab=97.73 E-value=3.1e-05 Score=75.06 Aligned_cols=116 Identities=12% Similarity=0.045 Sum_probs=77.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|+ |.+|..++..|+..|+ +|+++++++++.+.....+...... . .....+... .| .
T Consensus 1 MkI~ViGa-G~vG~~la~~l~~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~--------~-~~~~~i~~t--~d----~ 64 (294)
T 1oju_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG--------I-DKYPKIVGG--AD----Y 64 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHT--------T-TCCCEEEEE--SC----G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECChHHHHHHHHHHHhhhhh--------c-CCCCEEEEe--CC----H
Confidence 58999998 9999999999999997 9999999998765333333221100 0 012222221 11 4
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
++++++|+||.++|.......+....+..|..-...+++.+.+.+.. .||.+|.
T Consensus 65 ~a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvsN 119 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN 119 (294)
T ss_dssp GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS
T ss_pred HHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCC
Confidence 57899999999999754332222334567888888899998887543 5555553
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.72 E-value=6.3e-05 Score=74.61 Aligned_cols=76 Identities=17% Similarity=0.244 Sum_probs=54.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ- 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~- 156 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+. ++ | ... ..|..+.+.
T Consensus 169 ~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~---------g------a~~-~~d~~~~~~~ 228 (351)
T 1yb5_A 169 KAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL----QN---------G------AHE-VFNHREVNYI 228 (351)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HT---------T------CSE-EEETTSTTHH
T ss_pred CCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH----Hc---------C------CCE-EEeCCCchHH
Confidence 34679999999999999999999999999999999987765332 11 1 111 235555432
Q ss_pred --HHHHhc--CCCEEEEcccC
Q 013273 157 --IEPALG--NASVVICCIGA 173 (446)
Q Consensus 157 --~~~a~~--~~D~VI~~Ag~ 173 (446)
+.+... ++|+||+|+|.
T Consensus 229 ~~~~~~~~~~~~D~vi~~~G~ 249 (351)
T 1yb5_A 229 DKIKKYVGEKGIDIIIEMLAN 249 (351)
T ss_dssp HHHHHHHCTTCEEEEEESCHH
T ss_pred HHHHHHcCCCCcEEEEECCCh
Confidence 333333 69999999874
|
| >2o7s_A DHQ-SDH PR, bifunctional 3-dehydroquinate dehydratase/shikima dehydrogenase; shikimate, NADPH, dehydroshikimate, bifunctional enzyme; HET: DHK TLA NAP; 1.78A {Arabidopsis thaliana} PDB: 2o7q_A* 2gpt_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=1.5e-05 Score=83.59 Aligned_cols=103 Identities=15% Similarity=0.169 Sum_probs=62.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++++|+|| |++|++++..|++.|++|+++.|+.++.+.+.+.+. ..+ + ++.| +
T Consensus 362 l~~k~vlV~Ga-GGig~aia~~L~~~G~~V~i~~R~~~~a~~la~~~~----------------~~~--~--~~~d---l 417 (523)
T 2o7s_A 362 LASKTVVVIGA-GGAGKALAYGAKEKGAKVVIANRTYERALELAEAIG----------------GKA--L--SLTD---L 417 (523)
T ss_dssp ----CEEEECC-SHHHHHHHHHHHHHCC-CEEEESSHHHHHHHHHHTT----------------C-C--E--ETTT---T
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------------Cce--e--eHHH---h
Confidence 34578999998 799999999999999999999999888776654321 111 1 1222 2
Q ss_pred HH-HhcCCCEEEEcccCCCCc------c-----CCCCCcccchHHHH-HHHHHHHHhCCC
Q 013273 158 EP-ALGNASVVICCIGASEKE------V-----FDITGPYRIDFQAT-KNLVDAATIAKV 204 (446)
Q Consensus 158 ~~-a~~~~D~VI~~Ag~~~~~------~-----~~~~~~~~vNv~g~-~~l~~aa~~~~v 204 (446)
.+ ....+|+||||+|..... . .++...+++|+.+. ..+++.+++.|.
T Consensus 418 ~~~~~~~~DilVN~agvg~~~~~~~~~~~~~~~~~~~~v~Dvny~p~~T~ll~~a~~~G~ 477 (523)
T 2o7s_A 418 DNYHPEDGMVLANTTSMGMQPNVEETPISKDALKHYALVFDAVYTPRITRLLREAEESGA 477 (523)
T ss_dssp TTC--CCSEEEEECSSTTCTTCTTCCSSCTTTGGGEEEEEECCCSSSSCHHHHHHHTTTC
T ss_pred hhccccCceEEEECCCCCCCCCCCCCCCChHHcCcCcEEEEEeeCCccCHHHHHHHHCCC
Confidence 22 234589999999863210 1 11233466776542 245666666664
|
| >3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00025 Score=69.43 Aligned_cols=118 Identities=16% Similarity=0.177 Sum_probs=76.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++|.|+|| |.+|..++..|+..| .+|+++++++++.+.....+... .. .....+.+.. | +
T Consensus 4 m~~~KI~IIGa-G~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~~--------~~~~~~~v~~-~--~-- 68 (317)
T 3d0o_A 4 FKGNKVVLIGN-GAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-TP--------YSPTTVRVKA-G--E-- 68 (317)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-GG--------GSSSCCEEEE-C--C--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-hh--------hcCCCeEEEe-C--C--
Confidence 34579999998 999999999999888 58999999887665433333322 10 0002334432 2 1
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+++.++|+||.++|............+..|......+++.+.+.+..-+|.+.|
T Consensus 69 --~~a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (317)
T 3d0o_A 69 --YSDCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVAT 123 (317)
T ss_dssp --GGGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred --HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEec
Confidence 4568999999999997543322222234567777888888888775443444443
|
| >1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=8.7e-05 Score=72.86 Aligned_cols=117 Identities=11% Similarity=0.025 Sum_probs=73.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+...... . . ...++... .++
T Consensus 3 ~~~kI~VIGa-G~vG~~ia~~la~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~-~----~--~~~~i~~t-------~d~ 67 (322)
T 1t2d_A 3 PKAKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVM-A----Y--SNCKVSGS-------NTY 67 (322)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHH-H----T--CCCCEEEE-------CCG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHhhhhh-c----C--CCcEEEEC-------CCH
Confidence 3568999997 9999999999999997 9999999988776554444332000 0 0 01222221 224
Q ss_pred HHHhcCCCEEEEcccCCCCccCC-----CCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFD-----ITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~-----~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+++.++|+||.++|........ -......|......+++.+.+.... .||++|
T Consensus 68 -~al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 126 (322)
T 1t2d_A 68 -DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVVT 126 (322)
T ss_dssp -GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred -HHhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEec
Confidence 5689999999999865432111 1122344666677777777665433 455544
|
| >3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00024 Score=69.46 Aligned_cols=116 Identities=10% Similarity=0.022 Sum_probs=76.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|+ |.+|..++..|+..|. +|+++++++++.+....++...... ....+.+...| ..
T Consensus 1 Mkv~ViGa-G~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~---------~~~~~~v~~~~------~~ 64 (314)
T 3nep_X 1 MKVTVIGA-GNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSPI---------HGFDTRVTGTN------DY 64 (314)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHHH---------HTCCCEEEEES------SS
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhccccc---------cCCCcEEEECC------CH
Confidence 58999996 9999999999999886 9999999998776544444432100 00123333222 13
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+++.++|+||.++|.......+....+..|+.-...+++.+.+.+.. .++.+|.
T Consensus 65 ~a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp GGGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred HHhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 56889999999999764433333445677888899999999887543 4555553
|
| >1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00056 Score=66.84 Aligned_cols=116 Identities=16% Similarity=0.173 Sum_probs=75.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..++|.|+|+ |.+|..++..|+..| .+|+++++++++.+.....+... .......+.+.. | +
T Consensus 5 ~~~kI~IIGa-G~vG~sla~~l~~~~~~~ev~l~Di~~~~~~~~~~dl~~~---------~~~~~~~~~i~~-~--~--- 68 (316)
T 1ldn_A 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---------KVFAPKPVDIWH-G--D--- 68 (316)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---------TTSSSSCCEEEE-C--C---
T ss_pred CCCEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCcchHHHHHhhHHHH---------hhhcCCCeEEEc-C--c---
Confidence 4579999998 999999999998877 48999999987655443333321 001112344442 2 1
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
.+++.++|+||.++|............+..|......+++.+.+.... .++.+|
T Consensus 69 -~~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv~t 123 (316)
T 1ldn_A 69 -YDDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (316)
T ss_dssp -GGGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred -HHHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEEeC
Confidence 345889999999998754433332333556777777888888776433 344443
|
| >3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00062 Score=66.84 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=81.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEE-EcCCCChh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELV-ECDLEKRV 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~ 155 (446)
..++|.|+|+ |.+|..++..|+..|. +|+++++++++.+.....+..... +. ....+. ..|+
T Consensus 20 ~~~kV~ViGa-G~vG~~~a~~la~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~---------~~-~~~~i~~t~d~---- 84 (330)
T 3ldh_A 20 SYNKITVVGC-DAVGMADAISVLMKDLADEVALVDVMEDKLKGEMMDLEHGSL---------FL-HTAKIVSGKDY---- 84 (330)
T ss_dssp CCCEEEEEST-THHHHHHHHHHHHHCCCSEEEEECSCHHHHHHHHHHHHHHGG---------GS-CCSEEEEESSS----
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhhhh---------cc-cCCeEEEcCCH----
Confidence 4578999998 9999999999999986 899999998877665544443200 00 112222 2343
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+. ++++|+||-+||.......+....+..|..-...+++.+.+.+.. .++.+|.
T Consensus 85 --~~-~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 85 --SV-SAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp --CS-CSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred --HH-hCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 22 789999999999766554455566778888889999888877443 4555554
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=97.67 E-value=4.9e-05 Score=74.63 Aligned_cols=76 Identities=21% Similarity=0.242 Sum_probs=55.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ- 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~- 156 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .. .+ .|..+.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~---------g----~~-~~--~d~~~~~~~ 203 (333)
T 1wly_A 144 KPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETARK----L---------G----CH-HT--INYSTQDFA 203 (333)
T ss_dssp CTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTTSCHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C----CC-EE--EECCCHHHH
Confidence 356799999999999999999999999999999999876654422 1 1 11 12 35555432
Q ss_pred --HHHHh--cCCCEEEEcccC
Q 013273 157 --IEPAL--GNASVVICCIGA 173 (446)
Q Consensus 157 --~~~a~--~~~D~VI~~Ag~ 173 (446)
+.+.. .++|+||||+|.
T Consensus 204 ~~i~~~~~~~~~d~vi~~~g~ 224 (333)
T 1wly_A 204 EVVREITGGKGVDVVYDSIGK 224 (333)
T ss_dssp HHHHHHHTTCCEEEEEECSCT
T ss_pred HHHHHHhCCCCCeEEEECCcH
Confidence 33333 368999999985
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=97.66 E-value=5.9e-05 Score=74.31 Aligned_cols=77 Identities=18% Similarity=0.316 Sum_probs=54.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ ++ | ... ..|..+.+++
T Consensus 154 ~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~---~~---------g------~~~-~~d~~~~~~~ 214 (345)
T 2j3h_A 154 KEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKT---KF---------G------FDD-AFNYKEESDL 214 (345)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH---TS---------C------CSE-EEETTSCSCS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---Hc---------C------Cce-EEecCCHHHH
Confidence 356799999999999999999999999999999999877654421 11 1 111 1366554333
Q ss_pred HHHh-----cCCCEEEEcccC
Q 013273 158 EPAL-----GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~-----~~~D~VI~~Ag~ 173 (446)
.+.+ +++|+||+|+|.
T Consensus 215 ~~~~~~~~~~~~d~vi~~~g~ 235 (345)
T 2j3h_A 215 TAALKRCFPNGIDIYFENVGG 235 (345)
T ss_dssp HHHHHHHCTTCEEEEEESSCH
T ss_pred HHHHHHHhCCCCcEEEECCCH
Confidence 3332 369999999874
|
| >2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00027 Score=68.37 Aligned_cols=115 Identities=14% Similarity=0.057 Sum_probs=80.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~ 157 (446)
|||.|+|| |+||..++..|+.++ .++.+++.++++.+.....+....-. -.....+.. .|.
T Consensus 1 MKV~IiGa-G~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~~---------~~~~~~i~~~~d~------ 64 (294)
T 2x0j_A 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAG---------IDKYPKIVGGADY------ 64 (294)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHGG---------GTCCCEEEEESCG------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhccccc---------CCCCCeEecCCCH------
Confidence 68999995 999999999999887 58999999887666544444432100 001223332 232
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.++++|+||-.||.......+....+..|..-...+++.+.+++.+-+|.+=|
T Consensus 65 -~~~~~aDvVvitAG~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvs 118 (294)
T 2x0j_A 65 -SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (294)
T ss_dssp -GGGTTCSEEEECCCCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred -HHhCCCCEEEEecCCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEec
Confidence 357899999999998766555555667889999999999999886554444433
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=6.4e-05 Score=74.57 Aligned_cols=76 Identities=12% Similarity=0.185 Sum_probs=55.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ- 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~- 156 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+. ++ | .. . ..|..+.+.
T Consensus 161 ~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~----~~---------g----~~-~--~~~~~~~~~~ 220 (354)
T 2j8z_A 161 QAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE----KL---------G----AA-A--GFNYKKEDFS 220 (354)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH----HH---------T----CS-E--EEETTTSCHH
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH----Hc---------C----Cc-E--EEecCChHHH
Confidence 35679999999999999999999999999999999987766542 11 1 11 1 235555332
Q ss_pred --HHHHh--cCCCEEEEcccC
Q 013273 157 --IEPAL--GNASVVICCIGA 173 (446)
Q Consensus 157 --~~~a~--~~~D~VI~~Ag~ 173 (446)
+.+.. .++|+||+|+|.
T Consensus 221 ~~~~~~~~~~~~d~vi~~~G~ 241 (354)
T 2j8z_A 221 EATLKFTKGAGVNLILDCIGG 241 (354)
T ss_dssp HHHHHHTTTSCEEEEEESSCG
T ss_pred HHHHHHhcCCCceEEEECCCc
Confidence 33333 368999999985
|
| >1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00014 Score=71.58 Aligned_cols=93 Identities=15% Similarity=0.114 Sum_probs=71.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++|+|.|+ |.+|+.+++.|.+.|+ |+++++++++.+ +.+ .++.++.+|.+|++.+++
T Consensus 115 ~~~viI~G~-G~~g~~l~~~L~~~g~-v~vid~~~~~~~-~~~-------------------~~~~~i~gd~~~~~~L~~ 172 (336)
T 1lnq_A 115 SRHVVICGW-SESTLECLRELRGSEV-FVLAEDENVRKK-VLR-------------------SGANFVHGDPTRVSDLEK 172 (336)
T ss_dssp -CEEEEESC-CHHHHHHHTTGGGSCE-EEEESCGGGHHH-HHH-------------------TTCEEEESCTTSHHHHHH
T ss_pred cCCEEEECC-cHHHHHHHHHHHhCCc-EEEEeCChhhhh-HHh-------------------CCcEEEEeCCCCHHHHHh
Confidence 468999995 9999999999999999 999999988766 432 468999999999999998
Q ss_pred H-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEE
Q 013273 160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIM 209 (446)
Q Consensus 160 a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~ 209 (446)
+ ++++|.||-+.+. -.....++..+++.+.+ ++|-
T Consensus 173 a~i~~a~~vi~~~~~---------------d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 173 ANVRGARAVIVDLES---------------DSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp TCSTTEEEEEECCSS---------------HHHHHHHHHHHHTTCTTSEEEE
T ss_pred cChhhccEEEEcCCc---------------cHHHHHHHHHHHHHCCCCeEEE
Confidence 8 7899999987542 11233455666776665 5443
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=97.64 E-value=6.5e-05 Score=72.90 Aligned_cols=77 Identities=23% Similarity=0.241 Sum_probs=57.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|+|+ |++|+.++..|++.|+ +|+++.|+.++.+.+.+.+. .... ++.+.++
T Consensus 139 l~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~----------------~~~~----~~~~~~~ 197 (297)
T 2egg_A 139 LDGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGD----------------ERRS----AYFSLAE 197 (297)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSC----------------SSSC----CEECHHH
T ss_pred CCCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhh----------------hccC----ceeeHHH
Confidence 45689999996 8999999999999997 99999999988777654321 0000 1122345
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+.+.+.++|+|||+.+...
T Consensus 198 ~~~~~~~aDivIn~t~~~~ 216 (297)
T 2egg_A 198 AETRLAEYDIIINTTSVGM 216 (297)
T ss_dssp HHHTGGGCSEEEECSCTTC
T ss_pred HHhhhccCCEEEECCCCCC
Confidence 6777889999999998643
|
| >1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00014 Score=69.47 Aligned_cols=76 Identities=14% Similarity=0.213 Sum_probs=54.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |++|+.++..|++.|++|+++.|+.++.+.+.+.+... ..+.. .|+ +++
T Consensus 117 ~~~~~vlvlGa-Gg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~--------------~~~~~--~~~---~~~ 176 (272)
T 1p77_A 117 RPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQA--VSM---DSI 176 (272)
T ss_dssp CTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEE--EEG---GGC
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcccc--------------CCeEE--eeH---HHh
Confidence 45689999997 89999999999999999999999998888776554221 12322 232 112
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
.+ +++|+|||+++...
T Consensus 177 ~~--~~~DivIn~t~~~~ 192 (272)
T 1p77_A 177 PL--QTYDLVINATSAGL 192 (272)
T ss_dssp CC--SCCSEEEECCCC--
T ss_pred cc--CCCCEEEECCCCCC
Confidence 11 48999999998643
|
| >2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00046 Score=67.05 Aligned_cols=113 Identities=21% Similarity=0.155 Sum_probs=68.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|| |.+|..++..|+..|+ +|+++++++++.+.....+.. .......+.+... + .
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~g~~~eV~L~D~~~~~~~~~~~~l~~----------~~~~~~~~~i~~~---~----~ 62 (304)
T 2v6b_A 1 MKVGVVGT-GFVGSTAAFALVLRGSCSELVLVDRDEDRAQAEAEDIAH----------AAPVSHGTRVWHG---G----H 62 (304)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHTT----------SCCTTSCCEEEEE---C----G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHhhhh----------hhhhcCCeEEEEC---C----H
Confidence 47999997 9999999999999998 999999998765543222211 0000122333221 2 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
++++++|+||.+++............+..|+.....+++.+.+.+.. .+|.+|
T Consensus 63 ~a~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~t 116 (304)
T 2v6b_A 63 SELADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTS 116 (304)
T ss_dssp GGGTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECS
T ss_pred HHhCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEec
Confidence 45889999999998654322233344567888888888888776433 444443
|
| >1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00018 Score=70.41 Aligned_cols=115 Identities=14% Similarity=0.096 Sum_probs=70.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|.|+|+ |.+|..++..|+..|. +|++++.++++.+.....+.. .......+.+.. .+
T Consensus 7 ~~KI~IiGa-G~vG~~~a~~l~~~~~~~ev~L~Di~~~~~~g~~~dl~~----------~~~~~~~~~i~~---~~---- 68 (318)
T 1y6j_A 7 RSKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINH----------GLPFMGQMSLYA---GD---- 68 (318)
T ss_dssp CCCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTT----------SCCCTTCEEEC-----C----
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHH----------hHHhcCCeEEEE---CC----
Confidence 468999997 9999999999999986 999999988765543332221 100112333332 12
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+++.++|+||.++|............+..|+.....+++.+.+.+..-+|.+.|
T Consensus 69 ~~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~t 123 (318)
T 1y6j_A 69 YSDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 123 (318)
T ss_dssp GGGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred HHHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEEec
Confidence 3458999999999987543222222234667888888888888764443444444
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.0001 Score=73.06 Aligned_cols=73 Identities=21% Similarity=0.248 Sum_probs=52.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc---
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--- 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~--- 156 (446)
++|||+||+|.||..+++.+...|+ +|++++|++++.+.+.+. + | .. ...|..+.+.
T Consensus 162 ~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~---~---------g------~~-~~~d~~~~~~~~~ 222 (357)
T 2zb4_A 162 KTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSE---L---------G------FD-AAINYKKDNVAEQ 222 (357)
T ss_dssp CEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHT---S---------C------CS-EEEETTTSCHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHH---c---------C------Cc-eEEecCchHHHHH
Confidence 7999999999999999999999999 999999998766544321 1 1 11 1246655332
Q ss_pred HHHHh-cCCCEEEEccc
Q 013273 157 IEPAL-GNASVVICCIG 172 (446)
Q Consensus 157 ~~~a~-~~~D~VI~~Ag 172 (446)
+.+.. +++|+||+|+|
T Consensus 223 ~~~~~~~~~d~vi~~~G 239 (357)
T 2zb4_A 223 LRESCPAGVDVYFDNVG 239 (357)
T ss_dssp HHHHCTTCEEEEEESCC
T ss_pred HHHhcCCCCCEEEECCC
Confidence 22222 26999999998
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00011 Score=72.26 Aligned_cols=77 Identities=21% Similarity=0.240 Sum_probs=54.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.++ + | --.+ .|..+.+..
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~---~---------g-----~~~~--~~~~~~~~~ 208 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEE---L---------G-----FDGA--IDYKNEDLA 208 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHT---T---------C-----CSEE--EETTTSCHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---c---------C-----CCEE--EECCCHHHH
Confidence 4567999999999999999999999999999999998876654221 1 1 1112 355543322
Q ss_pred H---HHh-cCCCEEEEcccC
Q 013273 158 E---PAL-GNASVVICCIGA 173 (446)
Q Consensus 158 ~---~a~-~~~D~VI~~Ag~ 173 (446)
+ +.. +++|+||+|+|.
T Consensus 209 ~~~~~~~~~~~d~vi~~~g~ 228 (336)
T 4b7c_A 209 AGLKRECPKGIDVFFDNVGG 228 (336)
T ss_dssp HHHHHHCTTCEEEEEESSCH
T ss_pred HHHHHhcCCCceEEEECCCc
Confidence 2 222 469999999974
|
| >3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00069 Score=65.37 Aligned_cols=107 Identities=14% Similarity=0.232 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
....+|+|.| .|++|..++..|+..| -++++++++. .|...+.+.++++
T Consensus 34 L~~~~VlVvG-aGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~i----------- 101 (292)
T 3h8v_A 34 IRTFAVAIVG-VGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNI----------- 101 (292)
T ss_dssp GGGCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHH-----------
T ss_pred HhCCeEEEEC-cCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhh-----------
Confidence 4556899999 5999999999999999 5888888876 5666666666654
Q ss_pred CCCCceEEEEcCCCChhcHHHHh-----------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEE
Q 013273 139 QPVEMLELVECDLEKRVQIEPAL-----------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF 207 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~-----------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~ 207 (446)
.+.-+++.+..++++.+.+.+.+ .++|+||++.- |+..-..+-++|.+.+. .+
T Consensus 102 NP~v~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D---------------n~~~R~~in~~c~~~~~-Pl 165 (292)
T 3h8v_A 102 NPDVLFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD---------------NFEARMTINTACNELGQ-TW 165 (292)
T ss_dssp CTTSEEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS---------------SHHHHHHHHHHHHHHTC-CE
T ss_pred CCCcEEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCc---------------chhhhhHHHHHHHHhCC-CE
Confidence 12235666667777655566554 68999998842 33334456677777776 67
Q ss_pred EEEcc
Q 013273 208 IMVSS 212 (446)
Q Consensus 208 V~vSS 212 (446)
|+.+.
T Consensus 166 i~~gv 170 (292)
T 3h8v_A 166 MESGV 170 (292)
T ss_dssp EEEEE
T ss_pred EEeee
Confidence 76554
|
| >3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A* | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00033 Score=68.36 Aligned_cols=115 Identities=17% Similarity=0.192 Sum_probs=75.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-C--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-G--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+|.|+||+|+||..++..|..+ + .+++++++++ +......++... . ..+.+... .. ...
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~-~~~G~a~Dl~~~------------~-~~~~v~~~-~~--~~~ 63 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSHI------------P-TAVKIKGF-SG--EDA 63 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSST-THHHHHHHHHTS------------C-SSEEEEEE-CS--SCC
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCC-CchhHHHHhhCC------------C-CCceEEEe-cC--CCc
Confidence 58999999999999999999875 5 5899999887 333222222211 0 12222211 01 124
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
.+.++++|+||-+||.......+....++.|......+++.+.+.+.+ .++.+|.
T Consensus 64 ~~~~~~aDivii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvtN 119 (312)
T 3hhp_A 64 TPALEGADVVLISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIITN 119 (312)
T ss_dssp HHHHTTCSEEEECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECSS
T ss_pred HHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 567899999999999765443333445677888899999998876433 5666553
|
| >2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00017 Score=70.53 Aligned_cols=118 Identities=11% Similarity=0.033 Sum_probs=71.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++|.|+|+ |.+|..++..|++.|+ +|+++++++++.+.....+...... .+ ...++... . ++
T Consensus 3 ~~~kI~VIGa-G~~G~~ia~~la~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~-----~~--~~~~i~~t-~------d~ 67 (317)
T 2ewd_A 3 ERRKIAVIGS-GQIGGNIAYIVGKDNLADVVLFDIAEGIPQGKALDITHSMVM-----FG--STSKVIGT-D------DY 67 (317)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH-----HT--CCCCEEEE-S------CG
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCchHHHHHHHHHHhhhhh-----cC--CCcEEEEC-C------CH
Confidence 4578999997 9999999999999998 9999999987766532222111000 00 00122221 1 23
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+++.++|+||.++|..............-|......+++.+.+.... .+|++|.
T Consensus 68 -~a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii~~sN 122 (317)
T 2ewd_A 68 -ADISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVICITN 122 (317)
T ss_dssp -GGGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECCS
T ss_pred -HHhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 46789999999998654332222222233566666777777655323 4555554
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=97.52 E-value=0.00019 Score=71.51 Aligned_cols=76 Identities=22% Similarity=0.306 Sum_probs=57.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
..++|+|+|+ |.+|+.+++.|...|++|++++|++++.+.+.+... ..+..+ ..+.+.+.
T Consensus 166 ~~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~~~~~----------------~~~~~~---~~~~~~~~ 225 (361)
T 1pjc_A 166 KPGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEIE 225 (361)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhhC----------------ceeEee---eCCHHHHH
Confidence 4479999998 999999999999999999999999988776543211 122222 12345677
Q ss_pred HHhcCCCEEEEcccCC
Q 013273 159 PALGNASVVICCIGAS 174 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~ 174 (446)
+.+.++|+|||+++..
T Consensus 226 ~~~~~~DvVI~~~~~~ 241 (361)
T 1pjc_A 226 TAVAEADLLIGAVLVP 241 (361)
T ss_dssp HHHHTCSEEEECCCCT
T ss_pred HHHcCCCEEEECCCcC
Confidence 7788999999999863
|
| >1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00073 Score=63.81 Aligned_cols=108 Identities=19% Similarity=0.270 Sum_probs=73.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.|+ |++|.++++.|+..|. ++++++++. .|...+.+.++.+.
T Consensus 26 l~~~~VlvvG~-GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n--------- 95 (251)
T 1zud_1 26 LLDSQVLIIGL-GGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN--------- 95 (251)
T ss_dssp HHTCEEEEECC-STTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC---------
T ss_pred HhcCcEEEEcc-CHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC---------
Confidence 34568999995 7899999999999995 778876543 56677776666541
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+.-+++.+..++. .+.+.+.+.++|+||++.. |...-..+.++|.+.+. .+|+.+..+
T Consensus 96 --p~~~v~~~~~~~~-~~~~~~~~~~~DvVi~~~d---------------~~~~r~~l~~~~~~~~~-p~i~~~~~g 153 (251)
T 1zud_1 96 --PDIQLTALQQRLT-GEALKDAVARADVVLDCTD---------------NMATRQEINAACVALNT-PLITASAVG 153 (251)
T ss_dssp --TTSEEEEECSCCC-HHHHHHHHHHCSEEEECCS---------------SHHHHHHHHHHHHHTTC-CEEEEEEEB
T ss_pred --CCCEEEEEeccCC-HHHHHHHHhcCCEEEECCC---------------CHHHHHHHHHHHHHhCC-CEEEEeccc
Confidence 1123455544554 3567788889999999842 23333456677777775 677766543
|
| >2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum} | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00026 Score=69.58 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=73.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++|.|+|| |.+|..++..|+..|+ +|+++++++++++.....+...... . . ...++... .| +
T Consensus 14 ~~kI~ViGa-G~vG~~iA~~la~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~-~----~--~~~~i~~t-~d------~- 77 (328)
T 2hjr_A 14 RKKISIIGA-GQIGSTIALLLGQKDLGDVYMFDIIEGVPQGKALDLNHCMAL-I----G--SPAKIFGE-NN------Y- 77 (328)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSTTHHHHHHHHHHHHHHH-H----T--CCCCEEEE-SC------G-
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhHhhc-c----C--CCCEEEEC-CC------H-
Confidence 368999997 9999999999999998 9999999988776543333221000 0 0 01223321 22 3
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+++.++|+||.++|...............|+.....+++.+.+.... .+|++|.
T Consensus 78 ~al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 132 (328)
T 2hjr_A 78 EYLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVICITN 132 (328)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HHHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 56889999999998654222211223344677777788877765433 4444443
|
| >2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00055 Score=67.25 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=75.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.++++|.|+|| |.+|..++..|+..+. +|+++++++++++.....+.... .....+.+.. | +
T Consensus 7 ~~~~KI~IiGa-G~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~~----------~~~~~~~i~~-~--~-- 70 (326)
T 2zqz_A 7 KDHQKVILVGD-GAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNAL----------PFTSPKKIYS-A--E-- 70 (326)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTTG----------GGSCCCEEEE-C--C--
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHHH----------HhcCCeEEEE-C--C--
Confidence 34579999998 9999999999998874 89999998877766544443210 0012344442 2 1
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
.+++.++|+||..+|........-...+..|+.....+++.+.+.+.. .+|.+|
T Consensus 71 --~~a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t 125 (326)
T 2zqz_A 71 --YSDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA 125 (326)
T ss_dssp --GGGGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred --HHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC
Confidence 455889999999998754332222233456777888888888776433 555554
|
| >1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.46 E-value=0.0012 Score=64.18 Aligned_cols=113 Identities=14% Similarity=0.098 Sum_probs=73.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+| +|.+|..++..|++.| ++|++++|++++.+.+...+.... . .....+.+...| +
T Consensus 2 ~kI~VIG-aG~~G~~la~~L~~~g~~~~V~l~d~~~~~~~~~~~~l~~~~-~--------~~~~~~~~~~~d------~- 64 (309)
T 1hyh_A 2 RKIGIIG-LGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAM-A--------NLEAHGNIVIND------W- 64 (309)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG-G--------GSSSCCEEEESC------G-
T ss_pred CEEEEEC-CCHHHHHHHHHHHhCCCCCEEEEEcCCHHHHHHHHHHHHhhh-h--------hcCCCeEEEeCC------H-
Confidence 6899999 7999999999999999 899999999887776654443210 0 000223332222 2
Q ss_pred HHhcCCCEEEEcccCCCC----ccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEE
Q 013273 159 PALGNASVVICCIGASEK----EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMV 210 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~----~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~v 210 (446)
+++.++|+||.+++.... ...........|+.....+++.+.+.... .+|.+
T Consensus 65 ~~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~~ 121 (309)
T 1hyh_A 65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121 (309)
T ss_dssp GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEE
Confidence 457899999999986442 11222334556777778888888765433 34443
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00016 Score=71.26 Aligned_cols=99 Identities=14% Similarity=0.144 Sum_probs=67.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .. .+ .|..+.+
T Consensus 165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~~----~---------g----a~-~~--~d~~~~~~~ 224 (343)
T 2eih_A 165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAKA----L---------G----AD-ET--VNYTHPDWP 224 (343)
T ss_dssp CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTSTTHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----c---------C----CC-EE--EcCCcccHH
Confidence 356799999999999999999999999999999999877665432 1 1 11 12 3665532
Q ss_pred -cHHHHh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 -QIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 -~~~~a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.++. .++|+||+++| ... ...+++.++.. ++||.+++..
T Consensus 225 ~~~~~~~~~~~~d~vi~~~g-~~~---------------~~~~~~~l~~~--G~~v~~g~~~ 268 (343)
T 2eih_A 225 KEVRRLTGGKGADKVVDHTG-ALY---------------FEGVIKATANG--GRIAIAGASS 268 (343)
T ss_dssp HHHHHHTTTTCEEEEEESSC-SSS---------------HHHHHHHEEEE--EEEEESSCCC
T ss_pred HHHHHHhCCCCceEEEECCC-HHH---------------HHHHHHhhccC--CEEEEEecCC
Confidence 233333 36899999998 220 23344444433 4899887654
|
| >4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major} | Back alignment and structure |
|---|
Probab=97.44 E-value=0.001 Score=65.73 Aligned_cols=119 Identities=13% Similarity=0.149 Sum_probs=78.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+..-+|.|+||+|+||+.|+-.|+.... ++.+++.++. +++.+.-++... .+. -....+.
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~DL~~~----------~~~-~~~~~~~ 90 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAELEDC----------AFP-LLDKVVV 90 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------TCT-TEEEEEE
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhhhhhc----------Ccc-CCCcEEE
Confidence 3445899999999999999998887642 7888887653 223332233321 011 1122222
Q ss_pred cCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCC-CC-EEEEEcc
Q 013273 149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK-VN-HFIMVSS 212 (446)
Q Consensus 149 ~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~-v~-r~V~vSS 212 (446)
+ ....++++++|+||-+||.......+....++.|..-...+++...+.. -. +++.+|.
T Consensus 91 ~-----~~~~~a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN 151 (345)
T 4h7p_A 91 T-----ADPRVAFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN 151 (345)
T ss_dssp E-----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred c-----CChHHHhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC
Confidence 2 2356789999999999998766555555567889999999999987742 22 4555554
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00019 Score=71.16 Aligned_cols=76 Identities=17% Similarity=0.271 Sum_probs=54.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+.+|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | --.+ .|..+.+
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~~--~~~~~~~~~ 225 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACER----L---------G-----AKRG--INYRSEDFA 225 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c---------C-----CCEE--EeCCchHHH
Confidence 356799999999999999999999999999999999887765432 2 1 1122 3444432
Q ss_pred -cHHHHh-cCCCEEEEcccC
Q 013273 156 -QIEPAL-GNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~-~~~D~VI~~Ag~ 173 (446)
.+.++. .++|+||+|+|.
T Consensus 226 ~~~~~~~~~g~Dvvid~~g~ 245 (353)
T 4dup_A 226 AVIKAETGQGVDIILDMIGA 245 (353)
T ss_dssp HHHHHHHSSCEEEEEESCCG
T ss_pred HHHHHHhCCCceEEEECCCH
Confidence 222222 469999999985
|
| >2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A | Back alignment and structure |
|---|
Probab=97.42 E-value=6.9e-05 Score=74.44 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=60.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC------CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCC-CceEEEEcCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG------FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV-EMLELVECDL 151 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G------~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~-~~v~~v~~Dl 151 (446)
.+++|+|.||||.+|+.|++.|++++ .+|+++.+..+....+... -+.... ..+.+. |+
T Consensus 8 ~m~kVaIvGATG~vG~~llr~L~~~~~~~~~~~ei~~l~s~~~agk~~~~~------------~~~l~~~~~~~~~--~~ 73 (352)
T 2nqt_A 8 NATKVAVAGASGYAGGEILRLLLGHPAYADGRLRIGALTAATSAGSTLGEH------------HPHLTPLAHRVVE--PT 73 (352)
T ss_dssp SCEEEEEETTTSHHHHHHHHHHHTCHHHHTTSEEEEEEEESSCTTSBGGGT------------CTTCGGGTTCBCE--EC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHcCCCCCCccEEEEEEECCCcCCCchhhh------------cccccccceeeec--cC
Confidence 45799999999999999999999987 3777776432210000000 000000 112221 22
Q ss_pred CChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 152 EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 152 ~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+ .+.+.++|+||.|.|... +..++..+ +.|+ ++|-+|+..
T Consensus 74 -~----~~~~~~~DvVf~alg~~~----------------s~~~~~~~-~~G~-~vIDlSa~~ 113 (352)
T 2nqt_A 74 -E----AAVLGGHDAVFLALPHGH----------------SAVLAQQL-SPET-LIIDCGADF 113 (352)
T ss_dssp -C----HHHHTTCSEEEECCTTSC----------------CHHHHHHS-CTTS-EEEECSSTT
T ss_pred -C----HHHhcCCCEEEECCCCcc----------------hHHHHHHH-hCCC-EEEEECCCc
Confidence 1 233568999999988642 44566777 7775 788888864
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00027 Score=72.77 Aligned_cols=73 Identities=15% Similarity=0.180 Sum_probs=62.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.|+|+|.| .|.+|++|++.|.++||+|+++++++++.+.+.+. -++..+.||-++++.+++
T Consensus 3 ~M~iiI~G-~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~------------------~~~~~i~Gd~~~~~~L~~ 63 (461)
T 4g65_A 3 AMKIIILG-AGQVGGTLAENLVGENNDITIVDKDGDRLRELQDK------------------YDLRVVNGHASHPDVLHE 63 (461)
T ss_dssp CEEEEEEC-CSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHH------------------SSCEEEESCTTCHHHHHH
T ss_pred cCEEEEEC-CCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHh------------------cCcEEEEEcCCCHHHHHh
Confidence 47899999 59999999999999999999999999887765432 257889999999999998
Q ss_pred H-hcCCCEEEEcc
Q 013273 160 A-LGNASVVICCI 171 (446)
Q Consensus 160 a-~~~~D~VI~~A 171 (446)
+ ++.+|++|-+.
T Consensus 64 Agi~~ad~~ia~t 76 (461)
T 4g65_A 64 AGAQDADMLVAVT 76 (461)
T ss_dssp HTTTTCSEEEECC
T ss_pred cCCCcCCEEEEEc
Confidence 7 58899998653
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.41 E-value=0.00042 Score=68.26 Aligned_cols=77 Identities=22% Similarity=0.321 Sum_probs=54.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC-hhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK-RVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d-~~~ 156 (446)
..+.+|||+||+|.||..+++.+...|++|+++++++++.+.+.+ + | --.++..+ .+ .+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g-----a~~v~~~~-~~~~~~ 218 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVKS----V---------G-----ADIVLPLE-EGWAKA 218 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------T-----CSEEEESS-TTHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----c---------C-----CcEEecCc-hhHHHH
Confidence 356799999999999999999999999999999999887765432 1 1 11233333 22 223
Q ss_pred HHHHhc--CCCEEEEcccC
Q 013273 157 IEPALG--NASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~--~~D~VI~~Ag~ 173 (446)
+.++.. ++|+||+|+|.
T Consensus 219 v~~~~~~~g~Dvvid~~g~ 237 (342)
T 4eye_A 219 VREATGGAGVDMVVDPIGG 237 (342)
T ss_dssp HHHHTTTSCEEEEEESCC-
T ss_pred HHHHhCCCCceEEEECCch
Confidence 334443 69999999985
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00056 Score=65.71 Aligned_cols=74 Identities=20% Similarity=0.241 Sum_probs=55.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++|+|+ |++|+.++..|++.|+ +|+++.|+.++.+.+.+.+... ..+..+. +.+
T Consensus 124 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~--------------~~~~~~~--~~~--- 183 (281)
T 3o8q_A 124 LKGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAY--------------GEVKAQA--FEQ--- 183 (281)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGG--------------SCEEEEE--GGG---
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhcc--------------CCeeEee--HHH---
Confidence 45789999996 8999999999999995 9999999999888877655321 2344432 211
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+..++|+|||+....
T Consensus 184 ---l~~~aDiIInaTp~g 198 (281)
T 3o8q_A 184 ---LKQSYDVIINSTSAS 198 (281)
T ss_dssp ---CCSCEEEEEECSCCC
T ss_pred ---hcCCCCEEEEcCcCC
Confidence 126799999997653
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00033 Score=69.10 Aligned_cols=76 Identities=16% Similarity=0.117 Sum_probs=55.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|||+||+|.||..+++.+... |++|++++|++++.+.+.+ + | .. .+ .|..+.+.
T Consensus 169 ~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~~----~---------g----~~-~~--~~~~~~~~ 228 (347)
T 1jvb_A 169 DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A---------G----AD-YV--INASMQDP 228 (347)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H---------T----CS-EE--EETTTSCH
T ss_pred CCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH----h---------C----CC-EE--ecCCCccH
Confidence 35679999999999999999999999 9999999999877654422 1 1 11 12 35544332
Q ss_pred ---HHHHh--cCCCEEEEcccC
Q 013273 157 ---IEPAL--GNASVVICCIGA 173 (446)
Q Consensus 157 ---~~~a~--~~~D~VI~~Ag~ 173 (446)
+.++. +++|+||+|+|.
T Consensus 229 ~~~~~~~~~~~~~d~vi~~~g~ 250 (347)
T 1jvb_A 229 LAEIRRITESKGVDAVIDLNNS 250 (347)
T ss_dssp HHHHHHHTTTSCEEEEEESCCC
T ss_pred HHHHHHHhcCCCceEEEECCCC
Confidence 44444 479999999985
|
| >2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00034 Score=64.36 Aligned_cols=66 Identities=20% Similarity=0.307 Sum_probs=50.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+++|.|+| +|.+|+.+++.|++.|++|++++|+.++.+.+.+ .++.+. ++.+
T Consensus 28 ~~~I~iiG-~G~~G~~la~~l~~~g~~V~~~~r~~~~~~~~~~-------------------~g~~~~--------~~~~ 79 (215)
T 2vns_A 28 APKVGILG-SGDFARSLATRLVGSGFKVVVGSRNPKRTARLFP-------------------SAAQVT--------FQEE 79 (215)
T ss_dssp -CCEEEEC-CSHHHHHHHHHHHHTTCCEEEEESSHHHHHHHSB-------------------TTSEEE--------EHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-------------------cCCcee--------cHHH
Confidence 46899999 8999999999999999999999999876554311 123331 4667
Q ss_pred HhcCCCEEEEcccC
Q 013273 160 ALGNASVVICCIGA 173 (446)
Q Consensus 160 a~~~~D~VI~~Ag~ 173 (446)
++.++|+||.+...
T Consensus 80 ~~~~~DvVi~av~~ 93 (215)
T 2vns_A 80 AVSSPEVIFVAVFR 93 (215)
T ss_dssp HTTSCSEEEECSCG
T ss_pred HHhCCCEEEECCCh
Confidence 78899999998763
|
| >2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00016 Score=71.65 Aligned_cols=98 Identities=12% Similarity=0.047 Sum_probs=60.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|.|.||+|.||+.+++.|.++. .+|+.+.+..+....+.+. . +.+ .+. ...++.+.+
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g~~~~~~------~------~~~--~g~--~~~~~~~~~-- 64 (345)
T 2ozp_A 3 GKKTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAGEPVHFV------H------PNL--RGR--TNLKFVPPE-- 64 (345)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTTSBGGGT------C------GGG--TTT--CCCBCBCGG--
T ss_pred CCCEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhCchhHHh------C------chh--cCc--ccccccchh--
Confidence 45789999999999999999999876 4888877643321111000 0 000 000 001122222
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
+ +.++|+||.|.|... ...++..+.++|+ ++|-+|+.
T Consensus 65 -~-~~~vDvV~~a~g~~~----------------s~~~a~~~~~aG~-~VId~Sa~ 101 (345)
T 2ozp_A 65 -K-LEPADILVLALPHGV----------------FAREFDRYSALAP-VLVDLSAD 101 (345)
T ss_dssp -G-CCCCSEEEECCCTTH----------------HHHTHHHHHTTCS-EEEECSST
T ss_pred -H-hcCCCEEEEcCCcHH----------------HHHHHHHHHHCCC-EEEEcCcc
Confidence 2 478999999987632 4556667777887 68888874
|
| >4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.001 Score=63.71 Aligned_cols=93 Identities=15% Similarity=0.059 Sum_probs=56.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccC-CCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKG-IQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g-~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..++|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.+.+.... +... ..+ ......+.-....+.-..+
T Consensus 2 m~~~kV~VIG-aG~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~-~~~~-~~g~~~~~~~~~~~~~~i~~~~~ 78 (283)
T 4e12_A 2 TGITNVTVLG-TGVLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLA-AVYE-KEVAGAADGAAQKALGGIRYSDD 78 (283)
T ss_dssp CSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHH-HHHH-HHSTTCTTTHHHHHHHHCEEESC
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHH-HHHH-HhcccCCHHHHHHHHcCeEEeCC
Confidence 3457899998 5999999999999999999999999988777665532210 0000 000 0000000000000111234
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+++.++|+||.+...
T Consensus 79 ~~~~~~~aDlVi~av~~ 95 (283)
T 4e12_A 79 LAQAVKDADLVIEAVPE 95 (283)
T ss_dssp HHHHTTTCSEEEECCCS
T ss_pred HHHHhccCCEEEEeccC
Confidence 66778999999999754
|
| >1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0002 Score=71.29 Aligned_cols=100 Identities=16% Similarity=0.221 Sum_probs=62.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|.|.||+|.||+.+++.|.++. .+|+++.+..+....+...+... . ..+ ..|+.-.+
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g~~~~~~~~~~--~-----------~~v---~~dl~~~~-- 76 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAGQSMESVFPHL--R-----------AQK---LPTLVSVK-- 76 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTTSCHHHHCGGG--T-----------TSC---CCCCBCGG--
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcCCCHHHhCchh--c-----------Ccc---cccceecc--
Confidence 44689999999999999999999886 58888776543221111111000 0 111 13443222
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
++.+.++|+||.|.|... +...+..+ +.|+ ++|-.|+..
T Consensus 77 ~~~~~~vDvVf~atp~~~----------------s~~~a~~~-~aG~-~VId~sa~~ 115 (359)
T 1xyg_A 77 DADFSTVDAVFCCLPHGT----------------TQEIIKEL-PTAL-KIVDLSADF 115 (359)
T ss_dssp GCCGGGCSEEEECCCTTT----------------HHHHHHTS-CTTC-EEEECSSTT
T ss_pred hhHhcCCCEEEEcCCchh----------------HHHHHHHH-hCCC-EEEECCccc
Confidence 334578999999987532 34556666 6776 688888743
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0003 Score=67.98 Aligned_cols=75 Identities=19% Similarity=0.286 Sum_probs=54.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .+.+ .|..+.+++
T Consensus 124 ~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g------a~~~-~~~~~~~~~ 183 (302)
T 1iz0_A 124 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----L---------G------AEEA-ATYAEVPER 183 (302)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----T---------T------CSEE-EEGGGHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHh----c---------C------CCEE-EECCcchhH
Confidence 346799999999999999999999999999999999887665422 1 2 1111 344441334
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
.+.+.++|+||+ +|.
T Consensus 184 ~~~~~~~d~vid-~g~ 198 (302)
T 1iz0_A 184 AKAWGGLDLVLE-VRG 198 (302)
T ss_dssp HHHTTSEEEEEE-CSC
T ss_pred HHHhcCceEEEE-CCH
Confidence 445588999999 875
|
| >2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0012 Score=64.23 Aligned_cols=114 Identities=16% Similarity=0.068 Sum_probs=76.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|| |.+|..++..|+..+ .+|+++++++++++.....+.... .. ...+.+.. | + .
T Consensus 1 ~KI~IiGa-G~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~~---------~~-~~~~~v~~-~--~----~ 62 (310)
T 2xxj_A 1 MKVGIVGS-GMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHAT---------PF-AHPVWVWA-G--S----Y 62 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTTG---------GG-SCCCEEEE-C--C----G
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHhH---------hh-cCCeEEEE-C--C----H
Confidence 58999998 999999999999987 689999999877765444443210 00 12344443 2 2 4
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
++++++|+||..+|............+..|......+++.+++.+.. .+|.+|.
T Consensus 63 ~a~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 63 GDLEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp GGGTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred HHhCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 45899999999998754332222223456777788888888776433 5555543
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00042 Score=67.93 Aligned_cols=76 Identities=17% Similarity=0.117 Sum_probs=54.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+.+|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .-.+ .|..+.+
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------g-----a~~~--~~~~~~~~~ 206 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAKE----Y---------G-----AEYL--INASKEDIL 206 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T-----CSEE--EETTTSCHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CcEE--EeCCCchHH
Confidence 456799999999999999999999999999999998877664322 1 1 1122 2443322
Q ss_pred -cHHHHh--cCCCEEEEcccC
Q 013273 156 -QIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~--~~~D~VI~~Ag~ 173 (446)
.+.+.. .++|+||+|+|.
T Consensus 207 ~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 207 RQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp HHHHHHTTTSCEEEEEECCGG
T ss_pred HHHHHHhCCCCceEEEECCCh
Confidence 333333 368999999985
|
| >1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A* | Back alignment and structure |
|---|
Probab=97.33 E-value=0.00024 Score=69.32 Aligned_cols=115 Identities=17% Similarity=0.038 Sum_probs=70.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|+ |.+|..++..|++. |++|+++++++++.+.+...+... .... . ....+... .| ++
T Consensus 1 mkI~VIGa-G~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~-~~~~----~----~~~~i~~t--~d---~~ 65 (310)
T 1guz_A 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYES-GPVG----L----FDTKVTGS--ND---YA 65 (310)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTT-HHHH----T----CCCEEEEE--SC---GG
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhh-hhcc----c----CCcEEEEC--CC---HH
Confidence 57999997 99999999999985 799999999988777544322211 0000 0 11122111 12 33
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+ +.++|+||.+++............+..|+.....+++.+.+.... .+|.++
T Consensus 66 ~-l~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~t 118 (310)
T 1guz_A 66 D-TANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVVS 118 (310)
T ss_dssp G-GTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEECC
T ss_pred H-HCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEc
Confidence 3 789999999998543211111122345667777888887766433 555554
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=97.31 E-value=0.00034 Score=68.32 Aligned_cols=76 Identities=22% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+++|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | .-.+ .|..+.+
T Consensus 139 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------G-----a~~~--~~~~~~~~~ 198 (325)
T 3jyn_A 139 KPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAKA----L---------G-----AWET--IDYSHEDVA 198 (325)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CCEE--EeCCCccHH
Confidence 356799999999999999999999999999999999887665432 1 1 1122 2444432
Q ss_pred -cHHHHh--cCCCEEEEcccC
Q 013273 156 -QIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~--~~~D~VI~~Ag~ 173 (446)
.+.+.. .++|+||+|+|.
T Consensus 199 ~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 199 KRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp HHHHHHTTTCCEEEEEESSCG
T ss_pred HHHHHHhCCCCceEEEECCCh
Confidence 233333 369999999985
|
| >3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.00043 Score=65.51 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=64.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+ +|+|.|+ |+.|++++..|++.|. +|+++.|+.++.+.+. ..+..+ ..+++
T Consensus 108 ~~-~vliiGa-Gg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la--------------------~~~~~~-----~~~~~ 160 (253)
T 3u62_A 108 KE-PVVVVGA-GGAARAVIYALLQMGVKDIWVVNRTIERAKALD--------------------FPVKIF-----SLDQL 160 (253)
T ss_dssp CS-SEEEECC-SHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCC--------------------SSCEEE-----EGGGH
T ss_pred CC-eEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH--------------------HHcccC-----CHHHH
Confidence 45 8999995 9999999999999998 9999999988765432 112211 23456
Q ss_pred HHHhcCCCEEEEcccCCCCccCCC---------CCcccchHHHHHHHHHHHHhCCCC
Q 013273 158 EPALGNASVVICCIGASEKEVFDI---------TGPYRIDFQATKNLVDAATIAKVN 205 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~---------~~~~~vNv~g~~~l~~aa~~~~v~ 205 (446)
.+++.++|+|||+....-...... ...+++-+. ...+++.+++.|++
T Consensus 161 ~~~~~~aDiVInatp~gm~p~~~~i~~~~l~~~~~V~Divy~-~T~ll~~A~~~G~~ 216 (253)
T 3u62_A 161 DEVVKKAKSLFNTTSVGMKGEELPVSDDSLKNLSLVYDVIYF-DTPLVVKARKLGVK 216 (253)
T ss_dssp HHHHHTCSEEEECSSTTTTSCCCSCCHHHHTTCSEEEECSSS-CCHHHHHHHHHTCS
T ss_pred HhhhcCCCEEEECCCCCCCCCCCCCCHHHhCcCCEEEEeeCC-CcHHHHHHHHCCCc
Confidence 777889999999875321110000 111333333 55666777766664
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.26 E-value=0.00075 Score=64.54 Aligned_cols=73 Identities=18% Similarity=0.245 Sum_probs=54.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++++|+|+ |++|+.++..|++.|. +|+++.|+.++.+.+.+.+.. ..+..+ ++.+
T Consensus 118 l~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~---------------~~~~~~--~~~~--- 176 (272)
T 3pwz_A 118 LRNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDH---------------SRLRIS--RYEA--- 176 (272)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCC---------------TTEEEE--CSGG---
T ss_pred ccCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcc---------------CCeeEe--eHHH---
Confidence 46789999996 8999999999999995 999999999988887664321 123333 2322
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.. .++|+|||+...
T Consensus 177 l~~--~~~DivInaTp~ 191 (272)
T 3pwz_A 177 LEG--QSFDIVVNATSA 191 (272)
T ss_dssp GTT--CCCSEEEECSSG
T ss_pred hcc--cCCCEEEECCCC
Confidence 222 679999999764
|
| >2hjs_A USG-1 protein homolog; aspartate-semialdehyde dehydrogenase, probable hydrolase, PS aeruginosa, structurual genomics; 2.20A {Pseudomonas aeruginosa} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=97.26 E-value=0.0003 Score=69.56 Aligned_cols=94 Identities=20% Similarity=0.209 Sum_probs=57.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++|+|.||+|.||+.+++.|.++++ +++++......... ..+. + ..+.+. |+ |.+.
T Consensus 6 ~~kV~IiGAtG~iG~~llr~L~~~~~~~~elv~i~s~~~~g~~-------~~~~------g----~~i~~~--~~-~~~~ 65 (340)
T 2hjs_A 6 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQR-------MGFA------E----SSLRVG--DV-DSFD 65 (340)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCE-------EEET------T----EEEECE--EG-GGCC
T ss_pred CcEEEEECCCCHHHHHHHHHHHhCCCCcEEEEEEecCCCCCCc-------cccC------C----cceEEe--cC-CHHH
Confidence 46899999999999999999997754 55655422110000 0000 0 112222 22 1222
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+.++|+||.|.|.. ....++..+.+.|+ ++|.+|+..
T Consensus 66 ----~~~~DvV~~a~g~~----------------~s~~~a~~~~~aG~-kvId~Sa~~ 102 (340)
T 2hjs_A 66 ----FSSVGLAFFAAAAE----------------VSRAHAERARAAGC-SVIDLSGAL 102 (340)
T ss_dssp ----GGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred ----hcCCCEEEEcCCcH----------------HHHHHHHHHHHCCC-EEEEeCCCC
Confidence 46899999998742 25567777788887 577778754
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00064 Score=68.76 Aligned_cols=73 Identities=26% Similarity=0.405 Sum_probs=55.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|+|+ |.+|+.+++.|...|+ +|++++|+.++...+.+.+ | ... . +.++
T Consensus 165 l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~~~------------g------~~~--~---~~~~ 220 (404)
T 1gpj_A 165 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDL------------G------GEA--V---RFDE 220 (404)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHH------------T------CEE--C---CGGG
T ss_pred ccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHc------------C------Cce--e---cHHh
Confidence 45789999997 9999999999999998 9999999988765544322 1 121 1 2345
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+++.++|+||++.+..
T Consensus 221 l~~~l~~aDvVi~at~~~ 238 (404)
T 1gpj_A 221 LVDHLARSDVVVSATAAP 238 (404)
T ss_dssp HHHHHHTCSEEEECCSSS
T ss_pred HHHHhcCCCEEEEccCCC
Confidence 777788999999998653
|
| >4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0017 Score=64.60 Aligned_cols=70 Identities=23% Similarity=0.163 Sum_probs=51.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+.+|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++ .-..+
T Consensus 19 Mm~~mkIgiIG-lG~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~-------------------~g~-------~~~~s 71 (358)
T 4e21_A 19 YFQSMQIGMIG-LGRMGADMVRRLRKGGHECVVYDLNVNAVQALER-------------------EGI-------AGARS 71 (358)
T ss_dssp ---CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------------------TTC-------BCCSS
T ss_pred hhcCCEEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------CCC-------EEeCC
Confidence 45678999999 7999999999999999999999999987766532 111 11234
Q ss_pred HHHHhcCC---CEEEEcccC
Q 013273 157 IEPALGNA---SVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~---D~VI~~Ag~ 173 (446)
+++++..+ |+||.+...
T Consensus 72 ~~e~~~~a~~~DvVi~~vp~ 91 (358)
T 4e21_A 72 IEEFCAKLVKPRVVWLMVPA 91 (358)
T ss_dssp HHHHHHHSCSSCEEEECSCG
T ss_pred HHHHHhcCCCCCEEEEeCCH
Confidence 56666556 999998653
|
| >1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1 | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0018 Score=63.35 Aligned_cols=113 Identities=19% Similarity=0.134 Sum_probs=71.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|+|.|+|+ |.+|..++..|++.|+ +|++++|++++.+.+...+... +. ......+.. +|.
T Consensus 1 mkI~VIGa-G~~G~~la~~l~~~g~~~~V~l~D~~~~~~~~~~~~l~~~-~~---------~~~~~~i~~---~d~---- 62 (319)
T 1a5z_A 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHG-TP---------FTRRANIYA---GDY---- 62 (319)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH-GG---------GSCCCEEEE---CCG----
T ss_pred CEEEEECC-CHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHHHHHhh-hh---------hcCCcEEEe---CCH----
Confidence 57999997 9999999999999998 9999999987776654433321 00 001222222 232
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+++.++|+||.+++...............|......+++.+.+.... .+|.+|
T Consensus 63 ~~~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~t 116 (319)
T 1a5z_A 63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVT 116 (319)
T ss_dssp GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC
Confidence 34689999999998644321111112334666677777777765333 444443
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=97.23 E-value=0.00038 Score=69.75 Aligned_cols=77 Identities=18% Similarity=0.186 Sum_probs=58.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|+|+ |.||+.+++.|...|++|++++|++++.+.+.+.+ | ..+. .|..+...+
T Consensus 166 l~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~------------g----~~~~---~~~~~~~~l 225 (377)
T 2vhw_A 166 VEPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEF------------C----GRIH---TRYSSAYEL 225 (377)
T ss_dssp BCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT------------T----TSSE---EEECCHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhc------------C----CeeE---eccCCHHHH
Confidence 45789999997 99999999999999999999999988766543211 1 1121 233345667
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+++.++|+||++++..
T Consensus 226 ~~~l~~aDvVi~~~~~p 242 (377)
T 2vhw_A 226 EGAVKRADLVIGAVLVP 242 (377)
T ss_dssp HHHHHHCSEEEECCCCT
T ss_pred HHHHcCCCEEEECCCcC
Confidence 88888999999998754
|
| >3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A | Back alignment and structure |
|---|
Probab=97.23 E-value=0.0029 Score=62.78 Aligned_cols=106 Identities=8% Similarity=0.070 Sum_probs=74.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.|+ |++|..++..|+..| -++++++++. .|...+.+.+..+
T Consensus 116 L~~~~VlvvG~-GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~---------- 184 (353)
T 3h5n_A 116 LKNAKVVILGC-GGIGNHVSVILATSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKR---------- 184 (353)
T ss_dssp HHTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH----------
T ss_pred HhCCeEEEECC-CHHHHHHHHHHHhCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHH----------
Confidence 34568999995 899999999999999 4889988763 3556666666654
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHH-HHHHHHHHHHhCCCCEEEEEcc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQ-ATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~-g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.+.-+++.+..++.+...+.. +.++|+||++..- .. .-..+-++|.+.++ .+|+.+.
T Consensus 185 -np~v~v~~~~~~i~~~~~~~~-~~~~DlVvd~~Dn---------------~~~~r~~ln~~c~~~~~-p~i~~~~ 242 (353)
T 3h5n_A 185 -NSEISVSEIALNINDYTDLHK-VPEADIWVVSADH---------------PFNLINWVNKYCVRANQ-PYINAGY 242 (353)
T ss_dssp -CTTSEEEEEECCCCSGGGGGG-SCCCSEEEECCCC---------------STTHHHHHHHHHHHTTC-CEEEEEE
T ss_pred -CCCCeEEEeecccCchhhhhH-hccCCEEEEecCC---------------hHHHHHHHHHHHHHhCC-CEEEEEE
Confidence 122457777788877665667 8999999998521 11 12344567778876 6776554
|
| >3gxh_A Putative phosphatase (DUF442); YP_001181608.1, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.40A {Shewanella putrefaciens cn-32} PDB: 3gxg_A* | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00018 Score=62.97 Aligned_cols=71 Identities=17% Similarity=0.269 Sum_probs=51.5
Q ss_pred CcHHHHHHHHHHHHCCCeEEEEEcCchhHH---HHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--hcHHHHh--
Q 013273 89 TGKVGSRTVRELLKLGFRVRAGVRSVQRAE---NLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--VQIEPAL-- 161 (446)
Q Consensus 89 tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~---~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--~~~~~a~-- 161 (446)
+|+++...++.|++.|++|++..|+..... .+.+.++.. | .++..+.+|++++ +++++++
T Consensus 25 s~~p~~a~a~~La~~Ga~vvi~~r~~~e~~~~~~~~~~~~~~---------G----~~~~~i~~Dv~~~~~~~v~~~~~~ 91 (157)
T 3gxh_A 25 SGLPNEQQFSLLKQAGVDVVINLMPDSSKDAHPDEGKLVTQA---------G----MDYVYIPVDWQNPKVEDVEAFFAA 91 (157)
T ss_dssp EBCCCHHHHHHHHHTTCCEEEECSCTTSTTSCTTHHHHHHHT---------T----CEEEECCCCTTSCCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHcCCCEEEECCCcccccccccHHHHHHHc---------C----CeEEEecCCCCCCCHHHHHHHHHH
Confidence 367889999999999999999888654321 122223222 2 4577788999998 8877665
Q ss_pred -----cCCCEEEEcccC
Q 013273 162 -----GNASVVICCIGA 173 (446)
Q Consensus 162 -----~~~D~VI~~Ag~ 173 (446)
++ |++|||||.
T Consensus 92 i~~~~G~-dVLVnnAgg 107 (157)
T 3gxh_A 92 MDQHKGK-DVLVHCLAN 107 (157)
T ss_dssp HHHTTTS-CEEEECSBS
T ss_pred HHhcCCC-CEEEECCCC
Confidence 45 999999986
|
| >1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0025 Score=61.86 Aligned_cols=117 Identities=16% Similarity=0.133 Sum_probs=68.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+|+|.|.|+ |.+|..++..|++.|+ +|++++|++++.+...-.+.. +........+... .+.
T Consensus 6 ~~mkI~IiGa-G~vG~~~a~~l~~~g~~~~V~l~d~~~~~~~~~~~~~~~----------~~~~~~~~~v~~~--~~~-- 70 (319)
T 1lld_A 6 KPTKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQH----------GSSFYPTVSIDGS--DDP-- 70 (319)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHH----------TGGGSTTCEEEEE--SCG--
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHh----------hhhhcCCeEEEeC--CCH--
Confidence 3478999997 9999999999999998 999999987665421111111 0000012222221 121
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+.++|+||.+++.......+....+..|......+++.+++.+.+.+|.+.+
T Consensus 71 --~~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~ 124 (319)
T 1lld_A 71 --EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLIT 124 (319)
T ss_dssp --GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECC
T ss_pred --HHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEec
Confidence 346789999999976433211111223445666666777766544333443334
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00066 Score=67.45 Aligned_cols=71 Identities=17% Similarity=0.221 Sum_probs=51.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc---hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--h
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--R 154 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~---~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~ 154 (446)
+++|||+|| |.||..+++.+...|++|++++|++ ++.+.+. ++ +++.+ | .+ .
T Consensus 181 g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~~----~~---------------ga~~v--~-~~~~~ 237 (366)
T 2cdc_A 181 CRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVIE----ET---------------KTNYY--N-SSNGY 237 (366)
T ss_dssp TCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHHH----HH---------------TCEEE--E-CTTCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHHH----Hh---------------CCcee--c-hHHHH
Confidence 789999999 9999999999999999999999988 6654322 11 13333 4 43 1
Q ss_pred hcHHHHhcCCCEEEEcccC
Q 013273 155 VQIEPALGNASVVICCIGA 173 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~ 173 (446)
+.+.+.-.++|+||+++|.
T Consensus 238 ~~~~~~~~~~d~vid~~g~ 256 (366)
T 2cdc_A 238 DKLKDSVGKFDVIIDATGA 256 (366)
T ss_dssp HHHHHHHCCEEEEEECCCC
T ss_pred HHHHHhCCCCCEEEECCCC
Confidence 2232212579999999985
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00055 Score=67.49 Aligned_cols=98 Identities=17% Similarity=0.123 Sum_probs=63.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
.+.+|||+|+ |.||..+++.+...|+ +|++++|++++.+.+.+ + | --.+ .|..+.+
T Consensus 167 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~~----~---------G-----a~~~--~~~~~~~~~ 225 (348)
T 2d8a_A 167 SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKK----V---------G-----ADYV--INPFEEDVV 225 (348)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHHH----H---------T-----CSEE--ECTTTSCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH----h---------C-----CCEE--ECCCCcCHH
Confidence 5678999999 9999999999999999 99999999876654322 1 1 1112 3444422
Q ss_pred -cHHHHhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 -QIEPALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 -~~~~a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.+.++.. ++|+||+++|.. ......++.++.. ++||.+++..
T Consensus 226 ~~v~~~~~g~g~D~vid~~g~~---------------~~~~~~~~~l~~~--G~iv~~g~~~ 270 (348)
T 2d8a_A 226 KEVMDITDGNGVDVFLEFSGAP---------------KALEQGLQAVTPA--GRVSLLGLYP 270 (348)
T ss_dssp HHHHHHTTTSCEEEEEECSCCH---------------HHHHHHHHHEEEE--EEEEECCCCS
T ss_pred HHHHHHcCCCCCCEEEECCCCH---------------HHHHHHHHHHhcC--CEEEEEccCC
Confidence 2333332 699999998841 1123344444333 4899887643
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=97.19 E-value=0.00084 Score=66.76 Aligned_cols=75 Identities=19% Similarity=0.217 Sum_probs=57.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+ ++ | --.+ .|..+.+.+.
T Consensus 187 ~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~---~l---------G-----a~~v--~~~~~~~~~~ 246 (366)
T 1yqd_A 187 PGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALK---NF---------G-----ADSF--LVSRDQEQMQ 246 (366)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHH---TS---------C-----CSEE--EETTCHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hc---------C-----CceE--EeccCHHHHH
Confidence 5679999996 999999999999999999999999887655432 11 2 1122 3566666677
Q ss_pred HHhcCCCEEEEcccC
Q 013273 159 PALGNASVVICCIGA 173 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~ 173 (446)
++.+++|+||+++|.
T Consensus 247 ~~~~~~D~vid~~g~ 261 (366)
T 1yqd_A 247 AAAGTLDGIIDTVSA 261 (366)
T ss_dssp HTTTCEEEEEECCSS
T ss_pred HhhCCCCEEEECCCc
Confidence 777889999999985
|
| >1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0006 Score=69.64 Aligned_cols=40 Identities=20% Similarity=0.087 Sum_probs=36.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
|+|.|.| +|.+|..++..|++.|++|++++|++++.+.+.
T Consensus 1 mkI~VIG-~G~vG~~~A~~la~~G~~V~~~d~~~~~~~~l~ 40 (436)
T 1mv8_A 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (436)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHh
Confidence 4799999 799999999999999999999999998877654
|
| >4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.0015 Score=67.11 Aligned_cols=99 Identities=16% Similarity=0.252 Sum_probs=76.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.++|+|.| .|.||.++++.| +++++|.++.++.++...+.+.+ ++..++.||-+|.+-+.+
T Consensus 235 ~~~v~I~G-gG~ig~~lA~~L-~~~~~v~iIE~d~~r~~~la~~l-----------------~~~~Vi~GD~td~~~L~e 295 (461)
T 4g65_A 235 YRRIMIVG-GGNIGASLAKRL-EQTYSVKLIERNLQRAEKLSEEL-----------------ENTIVFCGDAADQELLTE 295 (461)
T ss_dssp CCEEEEEC-CSHHHHHHHHHH-TTTSEEEEEESCHHHHHHHHHHC-----------------TTSEEEESCTTCHHHHHH
T ss_pred ccEEEEEc-chHHHHHHHHHh-hhcCceEEEecCHHHHHHHHHHC-----------------CCceEEeccccchhhHhh
Confidence 46899999 499999999997 55799999999999988876643 578899999999998886
Q ss_pred H-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 160 A-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 160 a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+ +..+|++|-+.+- + ++|+... ..|++.|+++.|-.-.
T Consensus 296 e~i~~~D~~ia~T~~---D--------e~Ni~~~----llAk~~gv~kvIa~vn 334 (461)
T 4g65_A 296 ENIDQVDVFIALTNE---D--------ETNIMSA----MLAKRMGAKKVMVLIQ 334 (461)
T ss_dssp TTGGGCSEEEECCSC---H--------HHHHHHH----HHHHHTTCSEEEEECS
T ss_pred cCchhhcEEEEcccC---c--------HHHHHHH----HHHHHcCCcccccccc
Confidence 5 6889999977442 1 3355433 3467789988876443
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00083 Score=66.70 Aligned_cols=100 Identities=16% Similarity=0.204 Sum_probs=65.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+.+|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | --.++ |..+.+
T Consensus 162 ~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~----~---------G-----a~~~~--~~~~~~~~ 221 (362)
T 2c0c_A 162 SEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLKS----L---------G-----CDRPI--NYKTEPVG 221 (362)
T ss_dssp CTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T-----CSEEE--ETTTSCHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH----c---------C-----CcEEE--ecCChhHH
Confidence 356799999999999999999999999999999999876654432 1 1 11222 333322
Q ss_pred -cHHHHh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 156 -QIEPAL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 156 -~~~~a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.+.. .++|+||+|+|.. ....+++.++.. +++|.+++...
T Consensus 222 ~~~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~~--G~iv~~g~~~~ 265 (362)
T 2c0c_A 222 TVLKQEYPEGVDVVYESVGGA----------------MFDLAVDALATK--GRLIVIGFISG 265 (362)
T ss_dssp HHHHHHCTTCEEEEEECSCTH----------------HHHHHHHHEEEE--EEEEECCCGGG
T ss_pred HHHHHhcCCCCCEEEECCCHH----------------HHHHHHHHHhcC--CEEEEEeCCCC
Confidence 222222 3689999998730 123344444433 48999887543
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=97.18 E-value=0.00059 Score=67.05 Aligned_cols=76 Identities=20% Similarity=0.258 Sum_probs=54.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+.+|||+||+|.||..+++.+...|++|++++|++++.+.+.+ + | . -.+ .|..+.+
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------g----a-~~~--~~~~~~~~~ 202 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELLR----L---------G----A-AYV--IDTSTAPLY 202 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T----C-SEE--EETTTSCHH
T ss_pred CCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh----C---------C----C-cEE--EeCCcccHH
Confidence 456799999999999999999999999999999999887765432 1 1 1 112 2444432
Q ss_pred -cHHHHh--cCCCEEEEcccC
Q 013273 156 -QIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~--~~~D~VI~~Ag~ 173 (446)
.+.+.. .++|+||+|+|.
T Consensus 203 ~~~~~~~~~~g~Dvvid~~g~ 223 (340)
T 3gms_A 203 ETVMELTNGIGADAAIDSIGG 223 (340)
T ss_dssp HHHHHHTTTSCEEEEEESSCH
T ss_pred HHHHHHhCCCCCcEEEECCCC
Confidence 233333 369999999985
|
| >2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.00065 Score=65.46 Aligned_cols=41 Identities=27% Similarity=0.134 Sum_probs=35.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+|+|.|.|+ |.+|..++..|++.|++|++++|++++.+.+.
T Consensus 3 ~m~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~r~~~~~~~~~ 43 (316)
T 2ew2_A 3 AMKIAIAGA-GAMGSRLGIMLHQGGNDVTLIDQWPAHIEAIR 43 (316)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCeEEEECc-CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHH
Confidence 468999994 99999999999999999999999988766654
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=97.15 E-value=0.0038 Score=58.66 Aligned_cols=99 Identities=17% Similarity=0.184 Sum_probs=64.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++|+|.|++|.+|+.+++.+.+. |++|+.+.+..+....+.. ...+ +..|++.++...+
T Consensus 1 mkV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~~-------------------~~~D-vvIDfT~p~a~~~ 60 (245)
T 1p9l_A 1 MRVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLTD-------------------GNTE-VVIDFTHPDVVMG 60 (245)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHHH-------------------TTCC-EEEECSCTTTHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHhc-------------------cCCc-EEEEccChHHHHH
Confidence 47999999999999999999876 8999876654433333221 1233 4578888877665
Q ss_pred Hh-----cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEcccc
Q 013273 160 AL-----GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLG 214 (446)
Q Consensus 160 a~-----~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~ 214 (446)
.+ .++++||-..|... .....|.++|++. ++ .+++.+.++
T Consensus 61 ~~~~a~~~g~~~VigTTG~~~--------------e~~~~l~~aa~~~~~~-~vv~a~N~s 106 (245)
T 1p9l_A 61 NLEFLIDNGIHAVVGTTGFTA--------------ERFQQVESWLVAKPNT-SVLIAPNFA 106 (245)
T ss_dssp HHHHHHHTTCEEEECCCCCCH--------------HHHHHHHHHHHTSTTC-EEEECSCCC
T ss_pred HHHHHHHcCCCEEEcCCCCCH--------------HHHHHHHHHHHhCCCC-CEEEECCcc
Confidence 44 47899987766422 1123445555545 44 566666543
|
| >3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis} | Back alignment and structure |
|---|
Probab=97.13 E-value=0.0013 Score=67.42 Aligned_cols=86 Identities=21% Similarity=0.194 Sum_probs=54.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhccccc-ccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELA-NKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~-~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|.|.| +|.+|..++..|++.|++|++++|++++.+.+.+........|... ........++.+ ..++.+
T Consensus 3 mkI~VIG-~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~-------t~d~~e 74 (450)
T 3gg2_A 3 LDIAVVG-IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRF-------GTEIEQ 74 (450)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEE-------ESCHHH
T ss_pred CEEEEEC-cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEE-------ECCHHH
Confidence 6899999 6999999999999999999999999988777654100000000000 000000012222 234667
Q ss_pred HhcCCCEEEEcccCC
Q 013273 160 ALGNASVVICCIGAS 174 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~ 174 (446)
++.++|+||-+.+..
T Consensus 75 a~~~aDvViiaVptp 89 (450)
T 3gg2_A 75 AVPEADIIFIAVGTP 89 (450)
T ss_dssp HGGGCSEEEECCCCC
T ss_pred HHhcCCEEEEEcCCC
Confidence 788999999998754
|
| >1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6 | Back alignment and structure |
|---|
Probab=97.10 E-value=0.0014 Score=64.39 Aligned_cols=83 Identities=20% Similarity=0.150 Sum_probs=53.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC-Chhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~~ 156 (446)
+++|+|+|.|+ |.+|..++..|.+.|++|++++|++++.+.+.+.. ...+.+ ..... ...+. ...+
T Consensus 2 m~~mki~iiG~-G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~-~~~~~~----------~~~~~-~~~~~~~~~~ 68 (359)
T 1bg6_A 2 IESKTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRG-AIIAEG----------PGLAG-TAHPDLLTSD 68 (359)
T ss_dssp --CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHT-SEEEES----------SSCCE-EECCSEEESC
T ss_pred CCcCeEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcC-CeEEec----------ccccc-ccccceecCC
Confidence 34579999995 99999999999999999999999988776654321 000000 00000 01110 1234
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+++.++|+||.+...
T Consensus 69 ~~~~~~~~D~vi~~v~~ 85 (359)
T 1bg6_A 69 IGLAVKDADVILIVVPA 85 (359)
T ss_dssp HHHHHTTCSEEEECSCG
T ss_pred HHHHHhcCCEEEEeCCc
Confidence 66777899999999754
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=97.10 E-value=0.00097 Score=65.52 Aligned_cols=98 Identities=15% Similarity=0.169 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+++|||+|| |.||..+++.+...|++|++++|++++.+.+.+ + | .+. ..|..+.+
T Consensus 163 ~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~----l---------G------a~~-~~d~~~~~~~ 221 (339)
T 1rjw_A 163 KPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE----L---------G------ADL-VVNPLKEDAA 221 (339)
T ss_dssp CTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----T---------T------CSE-EECTTTSCHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHH----C---------C------CCE-EecCCCccHH
Confidence 34679999999 779999999999999999999999877664422 1 2 111 14665432
Q ss_pred -cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 156 -QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 156 -~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.++.+++|+||+++|... .....++.++.. +++|.++..
T Consensus 222 ~~~~~~~~~~d~vid~~g~~~---------------~~~~~~~~l~~~--G~~v~~g~~ 263 (339)
T 1rjw_A 222 KFMKEKVGGVHAAVVTAVSKP---------------AFQSAYNSIRRG--GACVLVGLP 263 (339)
T ss_dssp HHHHHHHSSEEEEEESSCCHH---------------HHHHHHHHEEEE--EEEEECCCC
T ss_pred HHHHHHhCCCCEEEECCCCHH---------------HHHHHHHHhhcC--CEEEEeccc
Confidence 23333368999999987521 233344444333 488888764
|
| >1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.00026 Score=67.81 Aligned_cols=36 Identities=25% Similarity=0.385 Sum_probs=28.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHH-CCCeEEEE-EcCc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLK-LGFRVRAG-VRSV 114 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~-~R~~ 114 (446)
.+++|+|+|++|++|+.+++.+.+ .|++|+++ +|+.
T Consensus 4 ~~mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~ 41 (273)
T 1dih_A 4 ANIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREG 41 (273)
T ss_dssp CBEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTT
T ss_pred CCcEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCc
Confidence 346899999999999999999885 47888855 4443
|
| >3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.00097 Score=63.89 Aligned_cols=66 Identities=23% Similarity=0.315 Sum_probs=50.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|.|.|+||.+|..+++.|++.|++|++.+|++++.+.+.+ . | + +.. +..+
T Consensus 11 mm~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~~~~~~~~~----~---------g------~-----~~~---~~~~ 63 (286)
T 3c24_A 11 PKTVAILGAGGKMGARITRKIHDSAHHLAAIEIAPEGRDRLQG----M---------G------I-----PLT---DGDG 63 (286)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSHHHHHHHHH----T---------T------C-----CCC---CSSG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHh----c---------C------C-----CcC---CHHH
Confidence 4699999988999999999999999999999999877665432 1 1 1 112 2345
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
++.++|+||.+..
T Consensus 64 ~~~~aDvVi~av~ 76 (286)
T 3c24_A 64 WIDEADVVVLALP 76 (286)
T ss_dssp GGGTCSEEEECSC
T ss_pred HhcCCCEEEEcCC
Confidence 6678999998864
|
| >7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A* | Back alignment and structure |
|---|
Probab=97.04 E-value=0.0059 Score=60.81 Aligned_cols=119 Identities=11% Similarity=0.094 Sum_probs=74.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCC--e---EEEEEcCchh----HHHHHHHHHHhhhcccccccCCCCC-CceEE
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGF--R---VRAGVRSVQR----AENLVQSVKQMKLDGELANKGIQPV-EMLEL 146 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~--~---V~~~~R~~~~----~~~l~~~~~~~~l~~~~~~~g~~~~-~~v~~ 146 (446)
+....+|.|+||+|+||.+++-.|+..+. + |.+..-+.+. +....-++.. +.... ..+.+
T Consensus 29 ~~~~~KV~ViGAaG~VG~~la~~l~~~~l~~e~~~l~L~d~d~~~~~~~~~G~amDL~h----------~~~p~~~~v~i 98 (375)
T 7mdh_A 29 WKKLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELED----------SLYPLLREVSI 98 (375)
T ss_dssp CCCCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHT----------TTCTTEEEEEE
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHcCCcCCCCceeEEEecCccchhhhhHHHHHhHHh----------hhhhhcCCcEE
Confidence 34557899999999999999999998862 2 6665444333 3332222221 11111 12222
Q ss_pred EEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CC-CEEEEEcc
Q 013273 147 VECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KV-NHFIMVSS 212 (446)
Q Consensus 147 v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v-~r~V~vSS 212 (446)
. ....+.++++|+||-.||.......+....++.|+.-...+++.+.+. +. ..||.+|.
T Consensus 99 --~-----~~~y~~~~daDvVVitag~prkpG~tR~DLl~~N~~I~k~i~~~i~~~a~p~~ivlVvsN 159 (375)
T 7mdh_A 99 --G-----IDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVGN 159 (375)
T ss_dssp --E-----SCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred --e-----cCCHHHhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 1 124677899999999999765443444445677888888998888774 32 35666654
|
| >3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.04 E-value=0.002 Score=62.11 Aligned_cols=66 Identities=11% Similarity=0.041 Sum_probs=52.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++.+ ..+++
T Consensus 14 ~~~~I~vIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~ 66 (296)
T 3qha_A 14 EQLKLGYIG-LGNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE-------------------AGATL-------ADSVA 66 (296)
T ss_dssp -CCCEEEEC-CSTTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH-------------------TTCEE-------CSSHH
T ss_pred CCCeEEEEC-cCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCEE-------cCCHH
Confidence 356899999 7999999999999999999999999988776543 12222 23567
Q ss_pred HHhcCCCEEEEccc
Q 013273 159 PALGNASVVICCIG 172 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag 172 (446)
+++. +|+||-+..
T Consensus 67 ~~~~-aDvvi~~vp 79 (296)
T 3qha_A 67 DVAA-ADLIHITVL 79 (296)
T ss_dssp HHTT-SSEEEECCS
T ss_pred HHHh-CCEEEEECC
Confidence 7778 999998864
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0014 Score=64.60 Aligned_cols=41 Identities=27% Similarity=0.327 Sum_probs=35.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN 119 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~ 119 (446)
..+.+|||+||+|.||..+++.+...|++|+++ +++++.+.
T Consensus 149 ~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~ 189 (343)
T 3gaz_A 149 QDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEY 189 (343)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHH
Confidence 356799999999999999999999999999998 77766544
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=97.03 E-value=0.005 Score=60.67 Aligned_cols=75 Identities=24% Similarity=0.250 Sum_probs=52.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC----
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK---- 153 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d---- 153 (446)
..+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+ + | .. .++ |..+
T Consensus 167 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----l---------G----a~-~~~--~~~~~~~~ 225 (352)
T 1e3j_A 167 QLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAKN----C---------G----AD-VTL--VVDPAKEE 225 (352)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH----T---------T----CS-EEE--ECCTTTSC
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH----h---------C----CC-EEE--cCcccccH
Confidence 35679999996 999999999999999999999998877654422 1 2 11 222 3332
Q ss_pred hhcHHHHh-----cCCCEEEEcccC
Q 013273 154 RVQIEPAL-----GNASVVICCIGA 173 (446)
Q Consensus 154 ~~~~~~a~-----~~~D~VI~~Ag~ 173 (446)
.+.+.+.. .++|+||+++|.
T Consensus 226 ~~~i~~~~~~~~g~g~D~vid~~g~ 250 (352)
T 1e3j_A 226 ESSIIERIRSAIGDLPNVTIDCSGN 250 (352)
T ss_dssp HHHHHHHHHHHSSSCCSEEEECSCC
T ss_pred HHHHHHHhccccCCCCCEEEECCCC
Confidence 23444444 369999999875
|
| >3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A* | Back alignment and structure |
|---|
Probab=97.02 E-value=0.00044 Score=66.29 Aligned_cols=70 Identities=20% Similarity=0.261 Sum_probs=52.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|+|+ |++|+.++..|++.|+ +|+++.|+.++.+.+. .++..+ ..++
T Consensus 115 l~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la--------------------~~~~~~-----~~~~ 168 (277)
T 3don_A 115 IEDAYILILGA-GGASKGIANELYKIVRPTLTVANRTMSRFNNWS--------------------LNINKI-----NLSH 168 (277)
T ss_dssp GGGCCEEEECC-SHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCC--------------------SCCEEE-----CHHH
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH--------------------Hhcccc-----cHhh
Confidence 35678999995 9999999999999998 8999999988765431 122221 2345
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+++.++|+|||+...
T Consensus 169 ~~~~~~~aDiVInaTp~ 185 (277)
T 3don_A 169 AESHLDEFDIIINTTPA 185 (277)
T ss_dssp HHHTGGGCSEEEECCC-
T ss_pred HHHHhcCCCEEEECccC
Confidence 66778899999999764
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.0012 Score=65.09 Aligned_cols=97 Identities=10% Similarity=0.173 Sum_probs=64.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh---c
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV---Q 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~---~ 156 (446)
+++|+|+||+|.||..+++.+...|++|+++++++++.+.+.+ + | --.+ .|..+.+ .
T Consensus 165 ~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----~---------G-----a~~~--~~~~~~~~~~~ 224 (349)
T 3pi7_A 165 EKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLKD----I---------G-----AAHV--LNEKAPDFEAT 224 (349)
T ss_dssp CSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHHH----H---------T-----CSEE--EETTSTTHHHH
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CCEE--EECCcHHHHHH
Confidence 3689999999999999999999999999999999888765432 2 2 1122 2333322 2
Q ss_pred HHHHh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 157 IEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
+.++. .++|+||+|+|.. .....++.++. .+++|.++...
T Consensus 225 v~~~~~~~g~D~vid~~g~~----------------~~~~~~~~l~~--~G~iv~~G~~~ 266 (349)
T 3pi7_A 225 LREVMKAEQPRIFLDAVTGP----------------LASAIFNAMPK--RARWIIYGRLD 266 (349)
T ss_dssp HHHHHHHHCCCEEEESSCHH----------------HHHHHHHHSCT--TCEEEECCCSC
T ss_pred HHHHhcCCCCcEEEECCCCh----------------hHHHHHhhhcC--CCEEEEEeccC
Confidence 33333 3799999998741 12333444433 25899987644
|
| >1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A* | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0062 Score=58.67 Aligned_cols=43 Identities=14% Similarity=0.040 Sum_probs=37.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
.+++|.|.|+ |.+|..++..|++.|++|++++|++++.+...+
T Consensus 14 ~~~~I~VIG~-G~mG~~iA~~la~~G~~V~~~d~~~~~~~~~~~ 56 (302)
T 1f0y_A 14 IVKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKK 56 (302)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH
T ss_pred cCCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH
Confidence 3568999995 999999999999999999999999887776544
|
| >1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8 | Back alignment and structure |
|---|
Probab=97.00 E-value=0.004 Score=53.10 Aligned_cols=88 Identities=17% Similarity=0.208 Sum_probs=58.7
Q ss_pred CCCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 78 KDDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 78 ~~~~~VlVtGat---G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
...++|.|.|++ |.+|..+++.|++.|++|+.+.++.+.. .++. -.
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L~~~G~~V~~vnp~~~~i------------------------~G~~-------~~ 60 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGLK-------CY 60 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEE-------CB
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHHHHCCCEEEEeCCCCCeE------------------------CCee-------ec
Confidence 456789999987 8999999999999999977766543210 1111 12
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.++.++.+.+|++|-+... .....+++.+.+.|++.++..++
T Consensus 61 ~s~~el~~~vDlvii~vp~----------------~~v~~v~~~~~~~g~~~i~~~~~ 102 (138)
T 1y81_A 61 RSVRELPKDVDVIVFVVPP----------------KVGLQVAKEAVEAGFKKLWFQPG 102 (138)
T ss_dssp SSGGGSCTTCCEEEECSCH----------------HHHHHHHHHHHHTTCCEEEECTT
T ss_pred CCHHHhCCCCCEEEEEeCH----------------HHHHHHHHHHHHcCCCEEEEcCc
Confidence 3344555679999887542 23556666777788877666553
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=97.00 E-value=0.0017 Score=66.49 Aligned_cols=93 Identities=13% Similarity=0.080 Sum_probs=63.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-C---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-F---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-- 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-- 154 (446)
++|+|.| .|.||+.+++.|++++ + +|++.++..... .+.+. -++.+...++++.
T Consensus 14 ~rVlIIG-aGgVG~~va~lla~~~dv~~~~I~vaD~~~~~~-~~~~~------------------~g~~~~~~~Vdadnv 73 (480)
T 2ph5_A 14 NRFVILG-FGCVGQALMPLIFEKFDIKPSQVTIIAAEGTKV-DVAQQ------------------YGVSFKLQQITPQNY 73 (480)
T ss_dssp SCEEEEC-CSHHHHHHHHHHHHHBCCCGGGEEEEESSCCSC-CHHHH------------------HTCEEEECCCCTTTH
T ss_pred CCEEEEC-cCHHHHHHHHHHHhCCCCceeEEEEeccchhhh-hHHhh------------------cCCceeEEeccchhH
Confidence 5799999 7999999999999974 4 788888765432 21111 1356666666543
Q ss_pred -hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 155 -VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 155 -~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
+.+.+++++.|+|||++-.. ....++++|.++|+ ++|-+
T Consensus 74 ~~~l~aLl~~~DvVIN~s~~~----------------~~l~Im~acleaGv-~YlDT 113 (480)
T 2ph5_A 74 LEVIGSTLEENDFLIDVSIGI----------------SSLALIILCNQKGA-LYINA 113 (480)
T ss_dssp HHHTGGGCCTTCEEEECCSSS----------------CHHHHHHHHHHHTC-EEEES
T ss_pred HHHHHHHhcCCCEEEECCccc----------------cCHHHHHHHHHcCC-CEEEC
Confidence 33566776679999864221 15678999999997 55443
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.0018 Score=63.67 Aligned_cols=43 Identities=19% Similarity=0.210 Sum_probs=37.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
.+.+|||+||+|.||..+++.+...|++|+++++++++.+.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~ 192 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK 192 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH
Confidence 4679999999999999999999999999999999887766543
|
| >1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.027 Score=54.13 Aligned_cols=90 Identities=20% Similarity=0.321 Sum_probs=60.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+.++|+|.|++|..|+.+++.|.+.|++++..+. +.+. + ....++.+ ..+++
T Consensus 6 ~~~~VaVvGasG~~G~~~~~~l~~~g~~~v~~Vn-P~~~-------------------g-~~i~G~~v-------y~sl~ 57 (288)
T 1oi7_A 6 RETRVLVQGITGREGQFHTKQMLTYGTKIVAGVT-PGKG-------------------G-MEVLGVPV-------YDTVK 57 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEEC-TTCT-------------------T-CEETTEEE-------ESSHH
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHcCCeEEEEEC-CCCC-------------------C-ceECCEEe-------eCCHH
Confidence 3468999999999999999999999999654332 2210 0 00012222 23456
Q ss_pred HHhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
++.+ .+|++|.+... ..+..+++.|.+.|++.+|.+++
T Consensus 58 el~~~~~~Dv~Ii~vp~----------------~~~~~~~~ea~~~Gi~~vVi~t~ 97 (288)
T 1oi7_A 58 EAVAHHEVDASIIFVPA----------------PAAADAALEAAHAGIPLIVLITE 97 (288)
T ss_dssp HHHHHSCCSEEEECCCH----------------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred HHhhcCCCCEEEEecCH----------------HHHHHHHHHHHHCCCCEEEEECC
Confidence 6666 89999987532 34677888888999977777664
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0015 Score=66.71 Aligned_cols=43 Identities=26% Similarity=0.309 Sum_probs=38.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
..+++|||+||+|.||..+++.+...|++|+++++++++.+.+
T Consensus 219 ~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~ 261 (447)
T 4a0s_A 219 KQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV 261 (447)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 4567999999999999999999999999999999988776654
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0032 Score=60.78 Aligned_cols=72 Identities=19% Similarity=0.287 Sum_probs=55.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|+|.| .|.||+.+++.|...|++|++.+|+.++...+.+ -++..+. ..+
T Consensus 154 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~~-------------------~g~~~~~-----~~~ 208 (300)
T 2rir_A 154 TIHGSQVAVLG-LGRTGMTIARTFAALGANVKVGARSSAHLARITE-------------------MGLVPFH-----TDE 208 (300)
T ss_dssp CSTTSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-------------------TTCEEEE-----GGG
T ss_pred CCCCCEEEEEc-ccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHH-------------------CCCeEEc-----hhh
Confidence 35678999999 5999999999999999999999999866543321 1223221 345
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+++.++|+||++...
T Consensus 209 l~~~l~~aDvVi~~~p~ 225 (300)
T 2rir_A 209 LKEHVKDIDICINTIPS 225 (300)
T ss_dssp HHHHSTTCSEEEECCSS
T ss_pred HHHHhhCCCEEEECCCh
Confidence 78888999999999874
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0026 Score=60.61 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=37.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+++|+|+|+ |+.|+.++..|++.|.+|+++.|+.++.+.+.
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la 158 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ 158 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 679999995 99999999999999999999999999888765
|
| >3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0016 Score=63.23 Aligned_cols=43 Identities=28% Similarity=0.353 Sum_probs=38.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
..+|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 19 ~~m~~I~iIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l~ 61 (310)
T 3doj_A 19 SHMMEVGFLG-LGIMGKAMSMNLLKNGFKVTVWNRTLSKCDELV 61 (310)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH
T ss_pred ccCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH
Confidence 4567999998 799999999999999999999999998877654
|
| >4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.00095 Score=61.50 Aligned_cols=44 Identities=11% Similarity=0.156 Sum_probs=38.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EEcCchhHHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQ 122 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~-~~R~~~~~~~l~~ 122 (446)
+++|+|.|.| +|.+|..+++.|++.|++|++ .+|++++.+.+.+
T Consensus 21 m~mmkI~IIG-~G~mG~~la~~l~~~g~~V~~v~~r~~~~~~~l~~ 65 (220)
T 4huj_A 21 QSMTTYAIIG-AGAIGSALAERFTAAQIPAIIANSRGPASLSSVTD 65 (220)
T ss_dssp GGSCCEEEEE-CHHHHHHHHHHHHHTTCCEEEECTTCGGGGHHHHH
T ss_pred hcCCEEEEEC-CCHHHHHHHHHHHhCCCEEEEEECCCHHHHHHHHH
Confidence 3467899999 899999999999999999999 8999888776654
|
| >2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0049 Score=59.92 Aligned_cols=114 Identities=13% Similarity=0.196 Sum_probs=75.1
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~~~ 159 (446)
+|.|+|| |.+|..++..|+..|. +|+++++++++++....++......- + ..+.+.. .| . +
T Consensus 1 KI~IiGa-G~vG~~~a~~l~~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~-----~----~~~~i~~t~d------~-~ 63 (308)
T 2d4a_B 1 MITILGA-GKVGMATAVMLMMRGYDDLLLIARTPGKPQGEALDLAHAAAEL-----G----VDIRISGSNS------Y-E 63 (308)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCSCEEEECSSTTHHHHHHHHHHHHHHHH-----T----CCCCEEEESC------G-G
T ss_pred CEEEECc-CHHHHHHHHHHHhCCCCEEEEEcCChhhHHHHHHHHHHhhhhc-----C----CCeEEEECCC------H-H
Confidence 4889998 9999999999998887 79999999887765444443321000 0 1222222 22 2 4
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+++++|+||..+|........-......|......+++.+.+.... .+|.+|.
T Consensus 64 a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (308)
T 2d4a_B 64 DMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVITTN 117 (308)
T ss_dssp GGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeCC
Confidence 6899999999999755433322233556777788888888775433 5666554
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0062 Score=60.17 Aligned_cols=78 Identities=13% Similarity=0.103 Sum_probs=53.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~-V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+.+|||+|+ |.||...++.+...|++ |+++++++++.+.+.+ + . ..+.....|-.+.++
T Consensus 178 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~-l-~---------------~~~~~~~~~~~~~~~ 239 (363)
T 3m6i_A 178 RLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAKE-I-C---------------PEVVTHKVERLSAEE 239 (363)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHH-H-C---------------TTCEEEECCSCCHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH-h-c---------------hhcccccccccchHH
Confidence 34678999998 99999999999999987 8999998887665432 1 1 223333334333333
Q ss_pred HHH----Hh--cCCCEEEEcccC
Q 013273 157 IEP----AL--GNASVVICCIGA 173 (446)
Q Consensus 157 ~~~----a~--~~~D~VI~~Ag~ 173 (446)
+.+ +. .++|+||+++|.
T Consensus 240 ~~~~v~~~t~g~g~Dvvid~~g~ 262 (363)
T 3m6i_A 240 SAKKIVESFGGIEPAVALECTGV 262 (363)
T ss_dssp HHHHHHHHTSSCCCSEEEECSCC
T ss_pred HHHHHHHHhCCCCCCEEEECCCC
Confidence 333 33 369999999875
|
| >3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A* | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0046 Score=60.75 Aligned_cols=79 Identities=14% Similarity=0.300 Sum_probs=57.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
...+|+|.| .|++|.++++.|+..| -++++++++. .|...+.+.++.+
T Consensus 33 ~~~~VlIvG-aGGlGs~va~~La~aGVg~ItlvD~D~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~i----------- 100 (340)
T 3rui_A 33 KNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRI----------- 100 (340)
T ss_dssp HTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred hCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEecCCEeccccccccccCChhhcChHHHHHHHHHHHHh-----------
Confidence 456899999 5999999999999999 4788887753 5666666666655
Q ss_pred CCCCceEE--EEcCCC--------------ChhcHHHHhcCCCEEEEcc
Q 013273 139 QPVEMLEL--VECDLE--------------KRVQIEPALGNASVVICCI 171 (446)
Q Consensus 139 ~~~~~v~~--v~~Dl~--------------d~~~~~~a~~~~D~VI~~A 171 (446)
.+.+++ +..++. +.+.+.+++.++|+||++.
T Consensus 101 --nP~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~t 147 (340)
T 3rui_A 101 --FPLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLV 147 (340)
T ss_dssp --CTTCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEECC
T ss_pred --CCCCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEecC
Confidence 144444 443331 2344667789999999985
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0027 Score=65.01 Aligned_cols=43 Identities=30% Similarity=0.268 Sum_probs=37.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
..+.+|||+||+|.||...++.+...|++|+++++++++.+.+
T Consensus 227 ~~g~~VlV~GasG~vG~~avqlak~~Ga~vi~~~~~~~~~~~~ 269 (456)
T 3krt_A 227 KQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKAEIC 269 (456)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEECCHHHHHHH
Confidence 4567999999999999999999999999999999988776654
|
| >1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A* | Back alignment and structure |
|---|
Probab=96.89 E-value=0.007 Score=59.81 Aligned_cols=108 Identities=14% Similarity=0.183 Sum_probs=74.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|..+++.|+..|. ++++++.+ ..++..+.+.+..+
T Consensus 34 L~~~~VlivG-~GGlG~~ia~~La~~Gvg~itlvD~d~V~~sNL~rq~~~~~~diG~~Ka~~~~~~l~~l---------- 102 (346)
T 1y8q_A 34 LRASRVLLVG-LKGLGAEIAKNLILAGVKGLTMLDHEQVTPEDPGAQFLIRTGSVGRNRAEASLERAQNL---------- 102 (346)
T ss_dssp HHTCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCSSCGGGCTTSCSSCTTSBHHHHHHHHHHHT----------
T ss_pred HhCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEECCCcchhhCCCCCccccccCcCCHHHHHHHHHHhH----------
Confidence 3456899999 58999999999999995 78888532 24666777766654
Q ss_pred CCCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 138 IQPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++.+..++.+ ...+.+.++|+||++.. |...-..+-++|.+.++ .||..++.+.
T Consensus 103 -np~v~v~~~~~~~~~--~~~~~~~~~dvVv~~~d---------------~~~~r~~ln~~~~~~~i-p~i~~~~~G~ 161 (346)
T 1y8q_A 103 -NPMVDVKVDTEDIEK--KPESFFTQFDAVCLTCC---------------SRDVIVKVDQICHKNSI-KFFTGDVFGY 161 (346)
T ss_dssp -CTTSEEEEECSCGGG--CCHHHHTTCSEEEEESC---------------CHHHHHHHHHHHHHTTC-EEEEEEEEBT
T ss_pred -CCCeEEEEEecccCc--chHHHhcCCCEEEEcCC---------------CHHHHHHHHHHHHHcCC-CEEEEeeccc
Confidence 112345555555543 34677899999998732 34445567778888875 7888766554
|
| >4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis} | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0017 Score=62.07 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=29.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHC-CCeEEE-EEcCc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKL-GFRVRA-GVRSV 114 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~-~~R~~ 114 (446)
|.+++|.|.|++|.+|+.+++.+.+. +++++. ++|+.
T Consensus 5 M~mikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~ 43 (272)
T 4f3y_A 5 MSSMKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTG 43 (272)
T ss_dssp -CCEEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTT
T ss_pred ccccEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecC
Confidence 34679999999999999999999876 578776 45654
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0043 Score=59.72 Aligned_cols=72 Identities=24% Similarity=0.318 Sum_probs=54.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|+|.| .|.||+.+++.|...|++|++.+|+..+...+.+ -++.++ +.++
T Consensus 152 ~l~g~~v~IiG-~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~~-----~~~~ 206 (293)
T 3d4o_A 152 TIHGANVAVLG-LGRVGMSVARKFAALGAKVKVGARESDLLARIAE-------------------MGMEPF-----HISK 206 (293)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-------------------TTSEEE-----EGGG
T ss_pred CCCCCEEEEEe-eCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHH-------------------CCCeec-----Chhh
Confidence 35678999999 6999999999999999999999999866443221 122332 2345
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+++.++|+||++...
T Consensus 207 l~~~l~~aDvVi~~~p~ 223 (293)
T 3d4o_A 207 AAQELRDVDVCINTIPA 223 (293)
T ss_dssp HHHHTTTCSEEEECCSS
T ss_pred HHHHhcCCCEEEECCCh
Confidence 77888999999999753
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.86 E-value=0.0037 Score=62.23 Aligned_cols=75 Identities=16% Similarity=0.225 Sum_probs=50.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+||+|.||..+++.+...|++|+++++ .++.+.+ +++ | . -.+ .|..+.+..
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~~-~~~~~~~----~~l---------G----a-~~v--~~~~~~~~~ 240 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCS-QDASELV----RKL---------G----A-DDV--IDYKSGSVE 240 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC-GGGHHHH----HHT---------T----C-SEE--EETTSSCHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEeC-hHHHHHH----HHc---------C----C-CEE--EECCchHHH
Confidence 35679999999999999999999999999998884 4544332 222 2 1 112 244443322
Q ss_pred HHHh--cCCCEEEEcccC
Q 013273 158 EPAL--GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~--~~~D~VI~~Ag~ 173 (446)
+++. .++|+||+|+|.
T Consensus 241 ~~~~~~~g~D~vid~~g~ 258 (375)
T 2vn8_A 241 EQLKSLKPFDFILDNVGG 258 (375)
T ss_dssp HHHHTSCCBSEEEESSCT
T ss_pred HHHhhcCCCCEEEECCCC
Confidence 2222 579999999985
|
| >3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0025 Score=61.22 Aligned_cols=42 Identities=14% Similarity=0.208 Sum_probs=37.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
..+++++|+|+ |+.|+.++..|.+.|. +|+++.|+.++++.+
T Consensus 120 ~~~k~vlvlGa-GGaaraia~~L~~~G~~~v~v~nRt~~ka~~L 162 (282)
T 3fbt_A 120 IKNNICVVLGS-GGAARAVLQYLKDNFAKDIYVVTRNPEKTSEI 162 (282)
T ss_dssp CTTSEEEEECS-STTHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred ccCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 45789999995 8999999999999997 999999999887765
|
| >1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1 | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0036 Score=60.78 Aligned_cols=25 Identities=24% Similarity=0.389 Sum_probs=23.6
Q ss_pred cHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 90 GKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 90 G~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|..|.+++++++++|++|+++.|..
T Consensus 65 GkmG~aiAe~~~~~Ga~V~lv~g~~ 89 (313)
T 1p9o_A 65 GRRGATSAEAFLAAGYGVLFLYRAR 89 (313)
T ss_dssp CHHHHHHHHHHHHTTCEEEEEEETT
T ss_pred cHHHHHHHHHHHHCCCEEEEEecCC
Confidence 9999999999999999999999854
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0021 Score=61.52 Aligned_cols=65 Identities=23% Similarity=0.209 Sum_probs=50.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++.+ ..++.++
T Consensus 2 ~~i~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~-------------------~g~~~-------~~~~~~~ 54 (287)
T 3pef_A 2 QKFGFIG-LGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAA-------------------LGAER-------AATPCEV 54 (287)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence 6899999 6999999999999999999999999988776543 12221 2346667
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||-+..
T Consensus 55 ~~~aDvvi~~vp 66 (287)
T 3pef_A 55 VESCPVTFAMLA 66 (287)
T ss_dssp HHHCSEEEECCS
T ss_pred HhcCCEEEEEcC
Confidence 777888887764
|
| >1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.01 Score=62.96 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=72.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
...+|+|.| .|+||..+++.|+..|. ++++++.+. .|...+.+.++.+
T Consensus 16 ~~s~VlVVG-aGGLGsevak~La~aGVG~ItlvD~D~Ve~SNLnRQflf~~~dVGk~KAeaaa~~L~~i----------- 83 (640)
T 1y8q_B 16 AGGRVLVVG-AGGIGCELLKNLVLTGFSHIDLIDLDTIDVSNLNRQFLFQKKHVGRSKAQVAKESVLQF----------- 83 (640)
T ss_dssp HHCEEEEEC-CSHHHHHHHHHHHHHTCCEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHTT-----------
T ss_pred hcCeEEEEC-cCHHHHHHHHHHHHcCCCeEEEecCCEEChhhcCCCcCCChhHcChHHHHHHHHHHHHH-----------
Confidence 346899999 59999999999999994 888888643 3444455554433
Q ss_pred CCCCceEEEEcCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 139 QPVEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.-+++.+..++.+.......+.++|+||++.. |+..-..+-++|.++++ .+|+.++.
T Consensus 84 NP~v~V~a~~~~i~~~~~~~~~~~~~DlVvda~D---------------n~~aR~~ln~~c~~~~i-PlI~~g~~ 142 (640)
T 1y8q_B 84 YPKANIVAYHDSIMNPDYNVEFFRQFILVMNALD---------------NRAARNHVNRMCLAADV-PLIESGTA 142 (640)
T ss_dssp CTTCEEEEEESCTTSTTSCHHHHTTCSEEEECCS---------------CHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred CCCCeEEEEecccchhhhhHhhhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEEEe
Confidence 2224567777788654433567899999999842 34444556677777775 56665543
|
| >3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0018 Score=63.85 Aligned_cols=102 Identities=17% Similarity=0.120 Sum_probs=61.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCc---hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSV---QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~---~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|++|.|.||||.+|+.|++.|.++ ++++..+.++. +....+.+.+..+ . + ...+.+... .+
T Consensus 4 M~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~~~~p~~--~------~---~~~~~v~~~--~~-- 68 (337)
T 3dr3_A 4 MLNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLISDLHPQL--K------G---IVELPLQPM--SD-- 68 (337)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHHHHCGGG--T------T---TCCCBEEEE--SS--
T ss_pred ceEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchHHhCccc--c------C---ccceeEecc--CC--
Confidence 468999999999999999999985 57887776544 2222111111000 0 0 012222222 01
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.++++.++|+||.|.+.. .+..++..+.+.|+ ++|-.|+..
T Consensus 69 -~~~~~~~~Dvvf~a~p~~----------------~s~~~~~~~~~~g~-~vIDlSa~f 109 (337)
T 3dr3_A 69 -ISEFSPGVDVVFLATAHE----------------VSHDLAPQFLEAGC-VVFDLSGAF 109 (337)
T ss_dssp -GGGTCTTCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred -HHHHhcCCCEEEECCChH----------------HHHHHHHHHHHCCC-EEEEcCCcc
Confidence 222337899999997642 14556666677787 788888753
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=96.77 E-value=0.0026 Score=63.25 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=55.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+ + | --.+ .|..+.+.+
T Consensus 193 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~----l---------G-----a~~v--i~~~~~~~~ 251 (369)
T 1uuf_A 193 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----L---------G-----ADEV--VNSRNADEM 251 (369)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------T-----CSEE--EETTCHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------C-----CcEE--eccccHHHH
Confidence 34679999997 889999999998899999999999887765432 2 2 1122 345554444
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
+++..++|+||+++|.
T Consensus 252 ~~~~~g~Dvvid~~g~ 267 (369)
T 1uuf_A 252 AAHLKSFDFILNTVAA 267 (369)
T ss_dssp HTTTTCEEEEEECCSS
T ss_pred HHhhcCCCEEEECCCC
Confidence 4445789999999985
|
| >2r00_A Aspartate-semialdehyde dehydrogenase; conformational change, half-OF-sites-reactivity, protein evolution, sequence homology; HET: HTI; 2.03A {Vibrio cholerae} PDB: 2qz9_A* 2r00_C* | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0011 Score=65.44 Aligned_cols=93 Identities=15% Similarity=0.166 Sum_probs=58.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++|.|.||+|.||+.+++.|.+++ .+|+++....+.... +.+. + ..+.+...| .+
T Consensus 3 ~~kV~I~GAtG~iG~~llr~L~~~~~p~~elv~i~s~~~~G~~-------~~~~------~----~~i~~~~~~---~~- 61 (336)
T 2r00_A 3 QFNVAIFGATGAVGETMLEVLQEREFPVDELFLLASERSEGKT-------YRFN------G----KTVRVQNVE---EF- 61 (336)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTCCEEEEEEEECTTTTTCE-------EEET------T----EEEEEEEGG---GC-
T ss_pred ccEEEEECCCCHHHHHHHHHHhcCCCCCEEEEEEECCCCCCCc-------eeec------C----ceeEEecCC---hH-
Confidence 4689999999999999999999983 567777632111000 0000 0 123332222 22
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.++|+||.|.|.. .+...+..+.+.|+ ++|-.|+.
T Consensus 62 ---~~~~vDvVf~a~g~~----------------~s~~~a~~~~~~G~-~vId~s~~ 98 (336)
T 2r00_A 62 ---DWSQVHIALFSAGGE----------------LSAKWAPIAAEAGV-VVIDNTSH 98 (336)
T ss_dssp ---CGGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred ---HhcCCCEEEECCCch----------------HHHHHHHHHHHcCC-EEEEcCCc
Confidence 236899999998752 25566677778887 67777875
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=96.76 E-value=0.0023 Score=63.81 Aligned_cols=75 Identities=17% Similarity=0.222 Sum_probs=56.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC-------
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL------- 151 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl------- 151 (446)
.+.+|+|+|+ |-+|..+++.|...|++|++++|++.+.+.+.+ + +.+++..|+
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----l---------------Ga~~~~l~~~~~~~~g 242 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVRS----V---------------GAQWLDLGIDAAGEGG 242 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHH----T---------------TCEECCCC--------
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH----c---------------CCeEEecccccccccc
Confidence 4579999996 999999999999999999999999987766532 1 123332221
Q ss_pred -----------CChhcHHHHhcCCCEEEEcccC
Q 013273 152 -----------EKRVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 152 -----------~d~~~~~~a~~~~D~VI~~Ag~ 173 (446)
.+.+.+.+++.++|+||+++..
T Consensus 243 ya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~i 275 (381)
T 3p2y_A 243 YARELSEAERAQQQQALEDAITKFDIVITTALV 275 (381)
T ss_dssp -----CHHHHHHHHHHHHHHHTTCSEEEECCCC
T ss_pred chhhhhHHHHhhhHHHHHHHHhcCCEEEECCCC
Confidence 1235677888999999998754
|
| >4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0024 Score=62.26 Aligned_cols=67 Identities=22% Similarity=0.281 Sum_probs=52.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++.+ ..++.
T Consensus 30 ~~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l~~-------------------~g~~~-------~~~~~ 82 (320)
T 4dll_A 30 YARKITFLG-TGSMGLPMARRLCEAGYALQVWNRTPARAASLAA-------------------LGATI-------HEQAR 82 (320)
T ss_dssp CCSEEEEEC-CTTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT-------------------TTCEE-------ESSHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH-------------------CCCEe-------eCCHH
Confidence 457899998 6999999999999999999999999987766532 12222 23567
Q ss_pred HHhcCCCEEEEccc
Q 013273 159 PALGNASVVICCIG 172 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag 172 (446)
+++.++|+||-+..
T Consensus 83 e~~~~aDvVi~~vp 96 (320)
T 4dll_A 83 AAARDADIVVSMLE 96 (320)
T ss_dssp HHHTTCSEEEECCS
T ss_pred HHHhcCCEEEEECC
Confidence 77888899888864
|
| >2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.047 Score=52.50 Aligned_cols=89 Identities=24% Similarity=0.357 Sum_probs=59.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
..+|+|.|++|..|+.+++.|.+.|++++..+ ++.+. + ....++.+ ..++++
T Consensus 13 ~~~v~V~Gasg~~G~~~~~~l~~~g~~~V~~V-nP~~~-------------------g-~~i~G~~v-------y~sl~e 64 (294)
T 2yv1_A 13 NTKAIVQGITGRQGSFHTKKMLECGTKIVGGV-TPGKG-------------------G-QNVHGVPV-------FDTVKE 64 (294)
T ss_dssp TCCEEEETTTSHHHHHHHHHHHHTTCCEEEEE-CTTCT-------------------T-CEETTEEE-------ESSHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCeEEEEe-CCCCC-------------------C-ceECCEee-------eCCHHH
Confidence 34688889999999999999999999844333 33210 0 00012222 234666
Q ss_pred Hhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 160 ALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+ .+|++|-+... ..+..+++.|.+.|++.+|.+++
T Consensus 65 l~~~~~~Dv~ii~vp~----------------~~~~~~v~ea~~~Gi~~vVi~t~ 103 (294)
T 2yv1_A 65 AVKETDANASVIFVPA----------------PFAKDAVFEAIDAGIELIVVITE 103 (294)
T ss_dssp HHHHHCCCEEEECCCH----------------HHHHHHHHHHHHTTCSEEEECCS
T ss_pred HhhcCCCCEEEEccCH----------------HHHHHHHHHHHHCCCCEEEEECC
Confidence 666 89999987532 34677888888899976776664
|
| >3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0023 Score=61.81 Aligned_cols=41 Identities=24% Similarity=0.320 Sum_probs=36.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+|+|.|.| .|.+|..++..|++.|++|++.+|++++.+.+.
T Consensus 7 ~~~I~iIG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~ 47 (303)
T 3g0o_A 7 DFHVGIVG-LGSMGMGAARSCLRAGLSTWGADLNPQACANLL 47 (303)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCeEEEEC-CCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH
Confidence 46899998 799999999999999999999999998877654
|
| >3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0022 Score=62.22 Aligned_cols=43 Identities=35% Similarity=0.301 Sum_probs=37.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
..+++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.
T Consensus 7 ~~~~~IgiIG-~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~ 49 (306)
T 3l6d_A 7 SFEFDVSVIG-LGAMGTIMAQVLLKQGKRVAIWNRSPGKAAALV 49 (306)
T ss_dssp CCSCSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 3456899998 799999999999999999999999998877654
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0018 Score=64.19 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=53.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-hc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~~ 156 (446)
..+.+|||+|+ |.||..+++.+...|++|+++++++++.+.+.+ + | --.+ .|..+. +.
T Consensus 178 ~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~v--~~~~~~~~~ 236 (360)
T 1piw_A 178 GPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----M---------G-----ADHY--IATLEEGDW 236 (360)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T-----CSEE--EEGGGTSCH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c---------C-----CCEE--EcCcCchHH
Confidence 34679999999 999999999998899999999999887665432 2 2 1122 233333 22
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
.+++.+++|+||+++|.
T Consensus 237 ~~~~~~~~D~vid~~g~ 253 (360)
T 1piw_A 237 GEKYFDTFDLIVVCASS 253 (360)
T ss_dssp HHHSCSCEEEEEECCSC
T ss_pred HHHhhcCCCEEEECCCC
Confidence 23333689999999986
|
| >4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0017 Score=62.81 Aligned_cols=65 Identities=18% Similarity=0.252 Sum_probs=45.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|-+.| .|..|..+++.|++.||+|++.+|++++.+.+.+ .++.. .++..++
T Consensus 6 ~kIgfIG-LG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~-------------------~G~~~-------~~s~~e~ 58 (297)
T 4gbj_A 6 EKIAFLG-LGNLGTPIAEILLEAGYELVVWNRTASKAEPLTK-------------------LGATV-------VENAIDA 58 (297)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEC-------CTTTT-------------------TTCEE-------CSSGGGG
T ss_pred CcEEEEe-cHHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------cCCeE-------eCCHHHH
Confidence 5799999 7999999999999999999999999887654321 22222 2456777
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+..+|+||-|..
T Consensus 59 ~~~~dvvi~~l~ 70 (297)
T 4gbj_A 59 ITPGGIVFSVLA 70 (297)
T ss_dssp CCTTCEEEECCS
T ss_pred HhcCCceeeecc
Confidence 889999998865
|
| >3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.012 Score=56.93 Aligned_cols=42 Identities=21% Similarity=0.259 Sum_probs=38.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
|++|-+.| .|..|..+++.|++.||+|++.+|++++.+.+.+
T Consensus 3 M~kIgfIG-lG~MG~~mA~~L~~~G~~v~v~dr~~~~~~~l~~ 44 (300)
T 3obb_A 3 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVA 44 (300)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHH
T ss_pred cCEEEEee-ehHHHHHHHHHHHhCCCeEEEEcCCHHHHHHHHH
Confidence 56899999 8999999999999999999999999988877654
|
| >2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0032 Score=59.13 Aligned_cols=67 Identities=16% Similarity=0.232 Sum_probs=51.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|.|.| +|.+|+.+++.|.+.|++|.+.+|++++.+.+.+.+ | +. -..++.+
T Consensus 3 ~m~i~iiG-~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~------------g------~~-------~~~~~~~ 56 (259)
T 2ahr_A 3 AMKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------------A------LP-------YAMSHQD 56 (259)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------------T------CC-------BCSSHHH
T ss_pred ccEEEEEC-CCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHc------------C------CE-------eeCCHHH
Confidence 46899999 799999999999999999999999988776654321 1 11 1123566
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
++.++|+||.+..
T Consensus 57 ~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 57 LIDQVDLVILGIK 69 (259)
T ss_dssp HHHTCSEEEECSC
T ss_pred HHhcCCEEEEEeC
Confidence 6778999998875
|
| >3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri} | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0019 Score=62.03 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=50.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++.+ ..++.
T Consensus 3 ~~~~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~-------~~~~~ 55 (301)
T 3cky_A 3 KSIKIGFIG-LGAMGKPMAINLLKEGVTVYAFDLMEANVAAVVA-------------------QGAQA-------CENNQ 55 (301)
T ss_dssp -CCEEEEEC-CCTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHT-------------------TTCEE-------CSSHH
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH-------------------CCCee-------cCCHH
Confidence 457899999 6999999999999999999999999877665432 12221 12355
Q ss_pred HHhcCCCEEEEccc
Q 013273 159 PALGNASVVICCIG 172 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag 172 (446)
+++.++|+||.+..
T Consensus 56 ~~~~~~D~vi~~vp 69 (301)
T 3cky_A 56 KVAAASDIIFTSLP 69 (301)
T ss_dssp HHHHHCSEEEECCS
T ss_pred HHHhCCCEEEEECC
Confidence 66677899998864
|
| >3pwk_A Aspartate-semialdehyde dehydrogenase; NADP binding, oxidoreductase-oxidoreductase I complex; HET: 25A L14; 1.50A {Streptococcus pneumoniae} PDB: 2gyy_A* 2gz2_A* 2gz3_A* 2gz1_A* 3pws_A* 3pyl_A 3pyx_A* 3pzb_A* 3q11_A* 3q1l_A | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0018 Score=64.36 Aligned_cols=94 Identities=19% Similarity=0.207 Sum_probs=56.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++|.|.||||++|..|++.|.+++| +++.+....+.-..+ . +....+.+...|.
T Consensus 2 ~~kVaIvGATG~vG~eLlrlL~~~~~p~~el~~~as~~saG~~~---------~--------~~~~~~~~~~~~~----- 59 (366)
T 3pwk_A 2 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL---------K--------FKDQDITIEETTE----- 59 (366)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCCCEEEEEEEECTTTTTCEE---------E--------ETTEEEEEEECCT-----
T ss_pred CcEEEEECCCChHHHHHHHHHhcCCCCcEEEEEEEccccCCCcc---------e--------ecCCCceEeeCCH-----
Confidence 45899999999999999999998765 445444322110000 0 0001122222221
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
..+.++|+||.|.|.. .+..++..+.+.|+ ++|=.|+..
T Consensus 60 --~~~~~~Dvvf~a~~~~----------------~s~~~a~~~~~~G~-~vIDlSa~~ 98 (366)
T 3pwk_A 60 --TAFEGVDIALFSAGSS----------------TSAKYAPYAVKAGV-VVVDNTSYF 98 (366)
T ss_dssp --TTTTTCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEECSSTT
T ss_pred --HHhcCCCEEEECCChH----------------hHHHHHHHHHHCCC-EEEEcCCcc
Confidence 1257899999998742 24556666677787 677778753
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0056 Score=61.56 Aligned_cols=76 Identities=18% Similarity=0.282 Sum_probs=56.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC--------
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-------- 150 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-------- 150 (446)
.+.+|+|+|+ |-+|...++.|...|++|++++|++.+.+.+.+ + | ..++..+
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~~----~---------G------~~~~~~~~~~~~d~~ 248 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVAS----L---------G------AKFIAVEDEEFKAAE 248 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHHH----T---------T------CEECCCCC-------
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHH----c---------C------Cceeecccccccccc
Confidence 4568999996 999999999999999999999999987665432 1 1 2222211
Q ss_pred --------CCC------hhcHHHHhcCCCEEEEcccCC
Q 013273 151 --------LEK------RVQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 151 --------l~d------~~~~~~a~~~~D~VI~~Ag~~ 174 (446)
+++ .+.+.+++.++|+||+++...
T Consensus 249 ~~~~ya~e~s~~~~~~~~~~l~e~l~~aDVVI~tvlip 286 (405)
T 4dio_A 249 TAGGYAKEMSGEYQVKQAALVAEHIAKQDIVITTALIP 286 (405)
T ss_dssp ----------CHHHHHHHHHHHHHHHTCSEEEECCCCS
T ss_pred cccchhhhcchhhhhhhHhHHHHHhcCCCEEEECCcCC
Confidence 222 246888899999999997643
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.0032 Score=61.98 Aligned_cols=71 Identities=21% Similarity=0.292 Sum_probs=52.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+|+ |.||...++.+...|++|+++++++++.+.+.+ + | --.++ .+.+.+
T Consensus 175 ~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----l---------G-----a~~v~----~~~~~~ 231 (348)
T 3two_A 175 TKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----M---------G-----VKHFY----TDPKQC 231 (348)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----T---------T-----CSEEE----SSGGGC
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----c---------C-----CCeec----CCHHHH
Confidence 45679999997 999999999999999999999999988765432 1 2 11222 334434
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+ ++|+||+++|..
T Consensus 232 ~~---~~D~vid~~g~~ 245 (348)
T 3two_A 232 KE---ELDFIISTIPTH 245 (348)
T ss_dssp CS---CEEEEEECCCSC
T ss_pred hc---CCCEEEECCCcH
Confidence 33 899999998853
|
| >2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0039 Score=64.40 Aligned_cols=43 Identities=21% Similarity=0.137 Sum_probs=38.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
..|+|.|.| .|.+|..++..|++.|++|++++|++++.+.+.+
T Consensus 7 ~~~~I~VIG-~G~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~ 49 (478)
T 2y0c_A 7 GSMNLTIIG-SGSVGLVTGACLADIGHDVFCLDVDQAKIDILNN 49 (478)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT
T ss_pred CCceEEEEC-cCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHC
Confidence 457899999 7999999999999999999999999988776653
|
| >3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens} | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0017 Score=62.23 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=50.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
++|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+. ++.+ ..++.++
T Consensus 2 ~~I~iiG-~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~-------------------g~~~-------~~~~~~~ 54 (287)
T 3pdu_A 2 TTYGFLG-LGIMGGPMAANLVRAGFDVTVWNRNPAKCAPLVAL-------------------GARQ-------ASSPAEV 54 (287)
T ss_dssp CCEEEEC-CSTTHHHHHHHHHHHTCCEEEECSSGGGGHHHHHH-------------------TCEE-------CSCHHHH
T ss_pred CeEEEEc-cCHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC-------------------CCee-------cCCHHHH
Confidence 5799998 79999999999999999999999999887765431 1211 1345666
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||-+..
T Consensus 55 ~~~advvi~~v~ 66 (287)
T 3pdu_A 55 CAACDITIAMLA 66 (287)
T ss_dssp HHHCSEEEECCS
T ss_pred HHcCCEEEEEcC
Confidence 677888887764
|
| >2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0026 Score=60.71 Aligned_cols=71 Identities=21% Similarity=0.271 Sum_probs=53.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|.| +|.+|+.++..|++.|++|++.+|+.++.+.+.+. -++.+ .+ ++
T Consensus 127 ~~~~~v~iiG-aG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~------------------~g~~~--~~-----~~ 180 (275)
T 2hk9_A 127 VKEKSILVLG-AGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQK------------------FPLEV--VN-----SP 180 (275)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTT------------------SCEEE--CS-----CG
T ss_pred cCCCEEEEEC-chHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHH------------------cCCee--eh-----hH
Confidence 3467999999 59999999999999999999999998776654210 12221 11 35
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
.+++.++|+||++....
T Consensus 181 ~~~~~~aDiVi~atp~~ 197 (275)
T 2hk9_A 181 EEVIDKVQVIVNTTSVG 197 (275)
T ss_dssp GGTGGGCSEEEECSSTT
T ss_pred HhhhcCCCEEEEeCCCC
Confidence 56678899999998754
|
| >2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.062 Score=51.49 Aligned_cols=90 Identities=18% Similarity=0.244 Sum_probs=60.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+..+|+|.|+||.+|+.+++.|.+.|++++..+ ++.+. + ....++.+ ..+++
T Consensus 6 ~~~rVaViG~sG~~G~~~~~~l~~~g~~~V~~V-~p~~~-------------------g-~~~~G~~v-------y~sl~ 57 (288)
T 2nu8_A 6 KNTKVICQGFTGSQGTFHSEQAIAYGTKMVGGV-TPGKG-------------------G-TTHLGLPV-------FNTVR 57 (288)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCT-------------------T-CEETTEEE-------ESSHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe-CCCcc-------------------c-ceeCCeec-------cCCHH
Confidence 346899999999999999999999899865443 33210 0 00012222 23466
Q ss_pred HHhc--CCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 159 PALG--NASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 159 ~a~~--~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
++.+ .+|++|-+.... .+..+++.|.++|++.+|.+++
T Consensus 58 el~~~~~~D~viI~tP~~----------------~~~~~~~ea~~~Gi~~iVi~t~ 97 (288)
T 2nu8_A 58 EAVAATGATASVIYVPAP----------------FCKDSILEAIDAGIKLIITITE 97 (288)
T ss_dssp HHHHHHCCCEEEECCCGG----------------GHHHHHHHHHHTTCSEEEECCC
T ss_pred HHhhcCCCCEEEEecCHH----------------HHHHHHHHHHHCCCCEEEEECC
Confidence 6666 899999886442 2567788888899876676665
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0052 Score=61.55 Aligned_cols=41 Identities=22% Similarity=0.237 Sum_probs=36.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+++|+|+| .|.+|..+++.|...|++|++++|++.+.+.+
T Consensus 171 ~g~~V~ViG-aG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~ 211 (384)
T 1l7d_A 171 PPARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQV 211 (384)
T ss_dssp CCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH
Confidence 567999999 59999999999999999999999998776554
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0023 Score=62.18 Aligned_cols=75 Identities=15% Similarity=0.211 Sum_probs=53.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+||+|.||...++.+...|++|++++++. +. ++. +++ |. -.+ .|..+.+.+
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~~~~-~~-~~~---~~l---------Ga-----~~~--i~~~~~~~~ 209 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTASKR-NH-AFL---KAL---------GA-----EQC--INYHEEDFL 209 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEECHH-HH-HHH---HHH---------TC-----SEE--EETTTSCHH
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeccc-hH-HHH---HHc---------CC-----CEE--EeCCCcchh
Confidence 4567999999999999999999999999999888543 32 222 222 21 112 344444436
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
.+.+.++|+||++.|.
T Consensus 210 ~~~~~g~D~v~d~~g~ 225 (321)
T 3tqh_A 210 LAISTPVDAVIDLVGG 225 (321)
T ss_dssp HHCCSCEEEEEESSCH
T ss_pred hhhccCCCEEEECCCc
Confidence 6667899999999874
|
| >3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp} | Back alignment and structure |
|---|
Probab=96.62 E-value=0.0064 Score=59.02 Aligned_cols=68 Identities=13% Similarity=0.098 Sum_probs=49.3
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+|+|.|.| .|.+|..+++.|++.|+ +|++.+|++ ++.+.+.+ .++.+ ..
T Consensus 23 ~~~~I~iIG-~G~mG~~~A~~L~~~G~~~V~~~dr~~~~~~~~~~~~-------------------~g~~~-------~~ 75 (312)
T 3qsg_A 23 NAMKLGFIG-FGEAASAIASGLRQAGAIDMAAYDAASAESWRPRAEE-------------------LGVSC-------KA 75 (312)
T ss_dssp --CEEEEEC-CSHHHHHHHHHHHHHSCCEEEEECSSCHHHHHHHHHH-------------------TTCEE-------CS
T ss_pred CCCEEEEEC-ccHHHHHHHHHHHHCCCCeEEEEcCCCCHHHHHHHHH-------------------CCCEE-------eC
Confidence 457999999 69999999999999999 999999973 44433221 12222 23
Q ss_pred cHHHHhcCCCEEEEcccC
Q 013273 156 QIEPALGNASVVICCIGA 173 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~ 173 (446)
++.+++.++|+||-+...
T Consensus 76 ~~~e~~~~aDvVi~~vp~ 93 (312)
T 3qsg_A 76 SVAEVAGECDVIFSLVTA 93 (312)
T ss_dssp CHHHHHHHCSEEEECSCT
T ss_pred CHHHHHhcCCEEEEecCc
Confidence 466777889999988754
|
| >4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A | Back alignment and structure |
|---|
Probab=96.61 E-value=0.0086 Score=63.05 Aligned_cols=104 Identities=13% Similarity=0.177 Sum_probs=68.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-------------------hhHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-------------------QRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-------------------~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
...+|+|.| .|++|..+++.|+..| -++++++++. .|...+.+.++++.
T Consensus 325 ~~arVLIVG-aGGLGs~vA~~La~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iN---------- 393 (615)
T 4gsl_A 325 KNTKVLLLG-AGTLGCYVSRALIAWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIF---------- 393 (615)
T ss_dssp HTCEEEEEC-CSHHHHHHHHHHHHTTCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHC----------
T ss_pred hCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhC----------
Confidence 457999999 5999999999999999 5788888754 56677777776651
Q ss_pred CCCCceEEEEcCCC--------------ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC
Q 013273 139 QPVEMLELVECDLE--------------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~--------------d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
+.-+++.+..++. +.+.+.+++.++|+||++..-. ..-..+-++|.+++.
T Consensus 394 -P~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ll~~~DlVvd~tDn~---------------~tR~~ln~~c~~~~~ 457 (615)
T 4gsl_A 394 -PLMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVDSR---------------ESRWLPSLLSNIENK 457 (615)
T ss_dssp -TTCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHHHHHHCSEEEECCSSG---------------GGTHHHHHHHHHTTC
T ss_pred -CCcEEEEeeccccccCccccchhhhcCCHHHHHHHhhcCCEEEecCCCH---------------HHHHHHHHHHHHcCC
Confidence 1123444444431 2344667788999999995321 111245566777765
Q ss_pred CEEEEE
Q 013273 205 NHFIMV 210 (446)
Q Consensus 205 ~r~V~v 210 (446)
.+|..
T Consensus 458 -PlI~a 462 (615)
T 4gsl_A 458 -TVINA 462 (615)
T ss_dssp -EEEEE
T ss_pred -eEEEE
Confidence 66653
|
| >2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.59 E-value=0.0024 Score=63.20 Aligned_cols=104 Identities=18% Similarity=0.168 Sum_probs=59.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCC--CCceEEEEcCCCCh
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQP--VEMLELVECDLEKR 154 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~--~~~v~~v~~Dl~d~ 154 (446)
++++|.|.||+|.+|+.+++.|.++. .+|+++..+. +....+.+.+... .+ +... ...+.+ .|+ |.
T Consensus 3 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~g~~~~~~~~~~-~~------~~~~~~~~~~~~--~~~-d~ 72 (350)
T 2ep5_A 3 DKIKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKIGKKYKDAVKWI-EQ------GDIPEEVQDLPI--VST-NY 72 (350)
T ss_dssp CCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGTTSBHHHHCCCC-SS------SSCCHHHHTCBE--ECS-SG
T ss_pred CCcEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhcCCCHHHhcCcc-cc------cccccCCceeEE--eeC-CH
Confidence 45789999999999999999998764 6888876221 1111111100000 00 0000 011222 232 22
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
+. +.++|+||.|.+.. ....++..+.++|+ ++|-.|+.
T Consensus 73 ~~----~~~vDvVf~atp~~----------------~s~~~a~~~~~aG~-~VId~s~~ 110 (350)
T 2ep5_A 73 ED----HKDVDVVLSALPNE----------------LAESIELELVKNGK-IVVSNASP 110 (350)
T ss_dssp GG----GTTCSEEEECCCHH----------------HHHHHHHHHHHTTC-EEEECSST
T ss_pred HH----hcCCCEEEECCChH----------------HHHHHHHHHHHCCC-EEEECCcc
Confidence 22 36899999887642 25567777888887 57777764
|
| >1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0033 Score=62.34 Aligned_cols=34 Identities=38% Similarity=0.337 Sum_probs=29.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS 113 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~ 113 (446)
+++|.|.||+|.||+.+++.|.+++ .+|+++.|+
T Consensus 8 ~~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s 42 (354)
T 1ys4_A 8 KIKVGVLGATGSVGQRFVQLLADHPMFELTALAAS 42 (354)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEEC
T ss_pred cceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcc
Confidence 3689999999999999999998875 688888754
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0031 Score=62.37 Aligned_cols=75 Identities=17% Similarity=0.192 Sum_probs=54.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+|||+|+ |.||...++.+...|++|+++++++++.+.+.+ ++ |. . .+ .|..+.+.+.
T Consensus 180 ~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~---~l---------Ga---~--~v--i~~~~~~~~~ 239 (357)
T 2cf5_A 180 PGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQ---DL---------GA---D--DY--VIGSDQAKMS 239 (357)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHT---TS---------CC---S--CE--EETTCHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHH---Hc---------CC---c--ee--eccccHHHHH
Confidence 5679999995 999999999988899999999999877654321 11 21 1 11 2444555566
Q ss_pred HHhcCCCEEEEcccC
Q 013273 159 PALGNASVVICCIGA 173 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~ 173 (446)
++.+++|+||+++|.
T Consensus 240 ~~~~g~D~vid~~g~ 254 (357)
T 2cf5_A 240 ELADSLDYVIDTVPV 254 (357)
T ss_dssp HSTTTEEEEEECCCS
T ss_pred HhcCCCCEEEECCCC
Confidence 666789999999985
|
| >4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.56 E-value=0.012 Score=57.30 Aligned_cols=69 Identities=13% Similarity=0.015 Sum_probs=50.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch---hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ---RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~---~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+|+|.|.| .|.+|..++..|++.| ++|++.+|+++ +.+...+.+.. .++ ..
T Consensus 24 ~m~IgvIG-~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~---------------~g~---------~~ 78 (317)
T 4ezb_A 24 MTTIAFIG-FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAE---------------LGV---------EP 78 (317)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHH---------------TTC---------EE
T ss_pred CCeEEEEC-ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHH---------------CCC---------CC
Confidence 47899999 7999999999999999 99999999872 33333222222 122 12
Q ss_pred -cHHHHhcCCCEEEEcccC
Q 013273 156 -QIEPALGNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~~~~D~VI~~Ag~ 173 (446)
++.+++.++|+||-+...
T Consensus 79 ~s~~e~~~~aDvVi~avp~ 97 (317)
T 4ezb_A 79 LDDVAGIACADVVLSLVVG 97 (317)
T ss_dssp ESSGGGGGGCSEEEECCCG
T ss_pred CCHHHHHhcCCEEEEecCC
Confidence 345667889999998754
|
| >2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A | Back alignment and structure |
|---|
Probab=96.56 E-value=0.0026 Score=65.47 Aligned_cols=43 Identities=19% Similarity=0.158 Sum_probs=37.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCchhHHHH
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSVQRAENL 120 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~~~~~~l 120 (446)
|..+|+|.|.| .|.+|..++..|++. |++|++++|++++.+.+
T Consensus 2 M~~~mkI~VIG-~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~l 46 (467)
T 2q3e_A 2 MFEIKKICCIG-AGYVGGPTCSVIAHMCPEIRVTVVDVNESRINAW 46 (467)
T ss_dssp CCCCCEEEEEC-CSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHHH
T ss_pred CCCccEEEEEC-CCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHHH
Confidence 34457999999 799999999999999 89999999998877664
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=96.55 E-value=0.0031 Score=60.48 Aligned_cols=65 Identities=17% Similarity=0.232 Sum_probs=50.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.| .|.+|..+++.|++.|++|++.+|++++.+.+.+ .++.+ ..++.++
T Consensus 6 m~i~iiG-~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~~-------------------~g~~~-------~~~~~~~ 58 (299)
T 1vpd_A 6 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET-------ASTAKAI 58 (299)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred ceEEEEC-chHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH-------------------CCCee-------cCCHHHH
Confidence 6899999 7999999999999999999999999887665432 12221 1235566
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||.+..
T Consensus 59 ~~~~D~vi~~v~ 70 (299)
T 1vpd_A 59 AEQCDVIITMLP 70 (299)
T ss_dssp HHHCSEEEECCS
T ss_pred HhCCCEEEEECC
Confidence 777899998875
|
| >3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0036 Score=58.57 Aligned_cols=38 Identities=32% Similarity=0.386 Sum_probs=33.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR 116 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~ 116 (446)
..+++|.|.| .|.+|..+++.|++.|++|++.+|++++
T Consensus 17 ~~~~kIgiIG-~G~mG~alA~~L~~~G~~V~~~~r~~~~ 54 (245)
T 3dtt_A 17 FQGMKIAVLG-TGTVGRTMAGALADLGHEVTIGTRDPKA 54 (245)
T ss_dssp --CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHH
T ss_pred cCCCeEEEEC-CCHHHHHHHHHHHHCCCEEEEEeCChhh
Confidence 4568999998 8999999999999999999999999876
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=96.52 E-value=0.0052 Score=61.95 Aligned_cols=41 Identities=27% Similarity=0.233 Sum_probs=36.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+|+|+|+ |.+|..+++.|...|++|++++|++.+.+.+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~ 211 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQV 211 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH
Confidence 4679999995 9999999999999999999999998876654
|
| >2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A | Back alignment and structure |
|---|
Probab=96.52 E-value=0.01 Score=57.51 Aligned_cols=111 Identities=16% Similarity=0.160 Sum_probs=66.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++|.|+|| |.+|..++..|+..|. +|++++++++ .......+... . .+++... .|
T Consensus 13 ~~~kV~ViGa-G~vG~~~a~~l~~~g~~~ev~L~Di~~~-~~g~a~dl~~~--~----------~~~i~~t-~d------ 71 (303)
T 2i6t_A 13 TVNKITVVGG-GELGIACTLAISAKGIADRLVLLDLSEG-TKGATMDLEIF--N----------LPNVEIS-KD------ 71 (303)
T ss_dssp -CCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECCC------CHHHHHHH--T----------CTTEEEE-SC------
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhcCCCCEEEEEcCCcc-hHHHHHHHhhh--c----------CCCeEEe-CC------
Confidence 4578999995 9999999999999998 9999999875 22211122211 0 1345442 22
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEcc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSS 212 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS 212 (446)
+ ++++++|+||..+|..... ..-......|......+++.+.+.... .||++|.
T Consensus 72 ~-~~l~~aD~Vi~aag~~~pG-~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~sN 126 (303)
T 2i6t_A 72 L-SASAHSKVVIFTVNSLGSS-QSYLDVVQSNVDMFRALVPALGHYSQHSVLLVASQ 126 (303)
T ss_dssp G-GGGTTCSEEEECCCC-----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEECSS
T ss_pred H-HHHCCCCEEEEcCCCCCCC-CCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEcCC
Confidence 3 4589999999999874211 111112344666777778777765433 4455554
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=96.51 E-value=0.011 Score=58.34 Aligned_cols=42 Identities=24% Similarity=0.229 Sum_probs=35.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
..+.+|||+|+ |.||...++.+...|+ +|+++++++++.+.+
T Consensus 170 ~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a 212 (356)
T 1pl8_A 170 TLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA 212 (356)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 34679999996 9999999999988998 899999988776543
|
| >2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.062 Score=51.76 Aligned_cols=89 Identities=24% Similarity=0.349 Sum_probs=58.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
..+|+|.|++|..|+.+++.|.+.|++++..+ ++.+. | ....++.+ ..++++
T Consensus 13 ~~~vvV~Gasg~~G~~~~~~l~~~g~~~v~~V-nP~~~-------------------g-~~i~G~~v-------y~sl~e 64 (297)
T 2yv2_A 13 ETRVLVQGITGREGSFHAKAMLEYGTKVVAGV-TPGKG-------------------G-SEVHGVPV-------YDSVKE 64 (297)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHHTCEEEEEE-CTTCT-------------------T-CEETTEEE-------ESSHHH
T ss_pred CCEEEEECCCCCHHHHHHHHHHhCCCcEEEEe-CCCCC-------------------C-ceECCEee-------eCCHHH
Confidence 44788889999999999999999999844333 33210 0 00011222 234566
Q ss_pred Hhc--C-CCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 160 ALG--N-ASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 160 a~~--~-~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+ + +|++|.+.... .+..+++.|.+.|++.+|.+++
T Consensus 65 l~~~~~~~DvaIi~vp~~----------------~~~~~v~ea~~~Gi~~vVi~t~ 104 (297)
T 2yv2_A 65 ALAEHPEINTSIVFVPAP----------------FAPDAVYEAVDAGIRLVVVITE 104 (297)
T ss_dssp HHHHCTTCCEEEECCCGG----------------GHHHHHHHHHHTTCSEEEECCC
T ss_pred HhhcCCCCCEEEEecCHH----------------HHHHHHHHHHHCCCCEEEEECC
Confidence 655 5 99999886431 2667788888899976776664
|
| >1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2 | Back alignment and structure |
|---|
Probab=96.49 E-value=0.044 Score=56.33 Aligned_cols=119 Identities=13% Similarity=0.063 Sum_probs=74.4
Q ss_pred CCEEEEECCCc-HHHHHHHHHHHHC----CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 80 DNLAFVAGATG-KVGSRTVRELLKL----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 80 ~~~VlVtGatG-~IG~~lv~~L~~~----G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+++|.|.||.+ +.|.+++..|++. |++|++.++++++++........+ +++. + ...++.. .
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l~~~~~~~~~~-l~~~----~--~~~~I~~-------t 68 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKY-VEEV----G--ADLKFEK-------T 68 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHH-HHHT----T--CCCEEEE-------E
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHHHHHHHHHHHH-hccC----C--CCcEEEE-------E
Confidence 56899999866 5678888888865 899999999998877655443322 1110 0 1122222 1
Q ss_pred hcHHHHhcCCCEEEEcccCCCC-------------cc----CC---CC----C--cccchHHHHHHHHHHHHhCCCCEEE
Q 013273 155 VQIEPALGNASVVICCIGASEK-------------EV----FD---IT----G--PYRIDFQATKNLVDAATIAKVNHFI 208 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~-------------~~----~~---~~----~--~~~vNv~g~~~l~~aa~~~~v~r~V 208 (446)
.++.+++.++|+||..+|.... +. .+ +. . ....|+.....+++.+++.+..-++
T Consensus 69 tD~~eal~dAD~VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~i 148 (480)
T 1obb_A 69 MNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWY 148 (480)
T ss_dssp SCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCHHHHhCCCCEEEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEE
Confidence 3466788999999999975210 11 11 00 1 1234677788888888887655455
Q ss_pred EEcc
Q 013273 209 MVSS 212 (446)
Q Consensus 209 ~vSS 212 (446)
.+.|
T Consensus 149 i~~T 152 (480)
T 1obb_A 149 LQAA 152 (480)
T ss_dssp EECS
T ss_pred EEeC
Confidence 4444
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 446 | ||||
| d1hdoa_ | 205 | c.2.1.2 (A:) Biliverdin IX beta reductase {Human ( | 1e-16 | |
| d1qyda_ | 312 | c.2.1.2 (A:) Pinoresinol-lariciresinol reductase { | 8e-14 | |
| d1qyca_ | 307 | c.2.1.2 (A:) Phenylcoumaran benzylic ether reducta | 9e-12 | |
| d1xgka_ | 350 | c.2.1.2 (A:) Negative transcriptional regulator Nm | 2e-10 | |
| d2q46a1 | 252 | c.2.1.2 (A:2-253) Hypothetical protein At5g02240 ( | 2e-09 | |
| d1r6da_ | 322 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 4e-09 | |
| d2b69a1 | 312 | c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 | 2e-08 | |
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 3e-08 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 4e-08 | |
| d1y1pa1 | 342 | c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolo | 4e-08 | |
| d1udca_ | 338 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 1e-06 | |
| d1t2aa_ | 347 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (H | 1e-06 | |
| d1sb8a_ | 341 | c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase W | 1e-06 | |
| d1e6ua_ | 315 | c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimeras | 4e-06 | |
| d1orra_ | 338 | c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella | 5e-06 | |
| d1n7ha_ | 339 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cr | 3e-05 | |
| d2c5aa1 | 363 | c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {T | 5e-05 | |
| d2a35a1 | 212 | c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pse | 4e-04 | |
| d1i24a_ | 393 | c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 | 4e-04 | |
| d1rkxa_ | 356 | c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia | 6e-04 | |
| d1rpna_ | 321 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomo | 0.001 | |
| d1ek6a_ | 346 | c.2.1.2 (A:) Uridine diphosphogalactose-4-epimeras | 0.001 | |
| d2bkaa1 | 232 | c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {H | 0.002 | |
| d1z45a2 | 347 | c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-ep | 0.002 | |
| d1gz6a_ | 302 | c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase do | 0.002 | |
| d1xg5a_ | 257 | c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC41 | 0.003 | |
| d1yxma1 | 297 | c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA re | 0.003 | |
| d1oc2a_ | 346 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 0.004 |
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 205 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 76.2 bits (186), Expect = 1e-16
Identities = 34/211 (16%), Positives = 67/211 (31%), Gaps = 32/211 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG+ G T+ + ++ G+ V VR R + +
Sbjct: 7 AIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEGPRPAHVV--------------- 51
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
D+ + ++ + VI +G P + + +N+V A
Sbjct: 52 ----VGDVLQAADVDKTVAGQDAVIVLLGTRNDL-----SPTTVMSEGARNIVAAMKAHG 102
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG-MERPTD 262
V+ + +S P + V + + L SGL Y V P ++P
Sbjct: 103 VDKVVACTS--AFLLWDPTKVPPRLQAVTDDHIRMHKVLRESGLKYVAVMPPHIGDQPL- 159
Query: 263 AYKETHNITLSQEDTLFGGQVSNLQVAELLA 293
T T++ + +S + +
Sbjct: 160 ----TGAYTVTLDGRGPSRVISKHDLGHFML 186
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Score = 69.8 bits (169), Expect = 8e-14
Identities = 47/328 (14%), Positives = 88/328 (26%), Gaps = 56/328 (17%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ G TG +G R V + LG R +V ++ ++++ G
Sbjct: 7 LIVGGTGYIGKRIVNASISLGHPTYVLFRP-----EVVSNIDKVQMLLYFKQLGA----- 56
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+L+E L+ ++ G LV+A A
Sbjct: 57 -KLIEASLDDHQRLVD---------ALKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 106
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPG---GMERP 260
+ S L + KRK A+ A+ +PYT V G
Sbjct: 107 NIKRFLPSE-FGMDPDIMEHALQPGSITFIDKRKVRRAIEAASIPYTYVSSNMFAGYFAG 165
Query: 261 TDAYKETHNITLSQEDTLFGGQVSNLQ------VAELLACMAKN--------------RS 300
+ A + H + + ++G V +
Sbjct: 166 SLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQTLNKTMYIRPPMNI 225
Query: 301 LSYCKVVEVIAETT---APLT--PMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEE 355
LS +V+++ + ++ LA + K+ EK +
Sbjct: 226 LSQKEVIQIWERLSEQNLDKIYISSQDFLADM-------KDKSYEEKIVRCHLYQIFFRG 278
Query: 356 SSAPITEEPVQTKAKVTDPLSPYTSYED 383
P +A P Y + +
Sbjct: 279 DLYNFEIGPNAIEATKLYPEVKYVTMDS 306
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} Length = 307 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Score = 63.3 bits (152), Expect = 9e-12
Identities = 52/327 (15%), Positives = 95/327 (29%), Gaps = 59/327 (18%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GATG +G + L LG VR + N ++ +L G
Sbjct: 7 LLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKA----QLLESFKASGA----- 57
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+V ++ + A+ N VVI +G + ++ N++ A
Sbjct: 58 -NIVHGSIDDHASLVEAVKNVDVVISTVG-------------SLQIESQVNIIKAIKEVG 103
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGG------- 256
S G + + V K K A+ A G+PYT V
Sbjct: 104 TVKRFFPSEFGNDV--DNVHAVEPAKSVFEVKAKVRRAIEAEGIPYTYVSSNCFAGYFLR 161
Query: 257 -MERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN--------------RSL 301
+ + + + + V + + +L
Sbjct: 162 SLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYLRLPANTL 221
Query: 302 SYCKVVEVIAETT-----APLTPMEELLAKIPSQRAEPKESIAPEKSDPAASKSMISEES 356
S ++V + + P EE+L I ++ P A S S+ +
Sbjct: 222 SLNELVALWEKKIDKTLEKAYVPEEEVLKLI-------ADTPFPANISIAISHSIFVKGD 274
Query: 357 SAPITEEPVQTKAKVTDPLSPYTSYED 383
P +A P YT+ ++
Sbjct: 275 QTNFEIGPAGVEASQLYPDVKYTTVDE 301
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} Length = 350 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Score = 60.0 bits (144), Expect = 2e-10
Identities = 49/282 (17%), Positives = 88/282 (31%), Gaps = 45/282 (15%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GATG+ G+ +R +G VRA V S++ + +Q +
Sbjct: 7 AVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGL----------------IAEELQAIPN 50
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+ L + L V + L + + S+ + K+L DAA A
Sbjct: 51 VTLFQGPLLNNVPLMDTLFEGAHLAFINTTSQ---------AGDEIAIGKDLADAAKRAG 101
Query: 204 VNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDA 263
+ SS+ + P + ++ K E + GLP T V G
Sbjct: 102 TIQHYIYSSMPDHSLYGPWPAVPMWA----PKFTVENYVRQLGLPSTFVYAGIY------ 151
Query: 264 YKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEEL 323
+N S LF ++ E A + L + + ++
Sbjct: 152 ----NNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALL------QI 201
Query: 324 LAKIPSQRAEPKESIAPEKSDPAASKSMISEESSAPITEEPV 365
P + + ++ E P + S + +T V
Sbjct: 202 FKDGPQKWNGHRIALTFETLSPVQVCAAFSRALNRRVTYVQV 243
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 252 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 55.6 bits (132), Expect = 2e-09
Identities = 60/254 (23%), Positives = 102/254 (40%), Gaps = 18/254 (7%)
Query: 84 FVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV 141
V GA+G+ G ++L + F + VRS Q E + D A+
Sbjct: 7 LVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIGGEADVFIGDITDADSINPAF 66
Query: 142 EMLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI 201
+ ++ + +++P D P ++D+ KN +DAA +
Sbjct: 67 QGIDALVILTSAVPKMKPGFDPTKGGRPEF-----IFEDGQYPEQVDWIGQKNQIDAAKV 121
Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPT 261
A V H ++V S+G P L +L+WKRKAE+ L SG PYTI+R GG+
Sbjct: 122 AGVKHIVVVGSMGGTNPDHPLNKLGNGN-ILVWKRKAEQYLADSGTPYTIIRAGGL---L 177
Query: 262 DAYKETHNITLSQEDTLF---GGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLT 318
D + + ++D L V VAE+ + K ++ ++ T
Sbjct: 178 DKEGGVRELLVGKDDELLQTDTKTVPRADVAEVCIQALLFEE-AKNKAFDLGSKPEGTST 236
Query: 319 P---MEELLAKIPS 329
P + L +++ S
Sbjct: 237 PTKDFKALFSQVTS 250
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} Length = 322 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Score = 55.2 bits (132), Expect = 4e-09
Identities = 29/183 (15%), Positives = 55/183 (30%), Gaps = 18/183 (9%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G G +GS VR+LL + + ++L + + L A+ +
Sbjct: 4 LVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVL-DSLTYAGNRANLAPVDADPRL----- 57
Query: 144 LELVECDLEKRVQIEPALGNASVVICC--IGASEKEVFDITGPYRIDFQATKNLVDAATI 201
V D+ + L ++ ++ + + + Q T+ L+ A
Sbjct: 58 -RFVHGDIRDAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD 116
Query: 202 AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----KRKAEEALIA----SGLPYTIV 252
A V + VS+ + K ++ A GL I
Sbjct: 117 AGVGRVVHVSTNQVYGSIDSGSWTESSPLEPNSPYAASKAGSDLVARAYHRTYGLDVRIT 176
Query: 253 RPG 255
R
Sbjct: 177 RCC 179
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 312 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Score = 53.5 bits (128), Expect = 2e-08
Identities = 29/208 (13%), Positives = 57/208 (27%), Gaps = 42/208 (20%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVR-SVQRAENLVQSVKQMKLDGELANKGIQPVE 142
+ G G VGS +L+ G V R N+ + +
Sbjct: 5 LITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFE------------ 52
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
L+ D+ + + IE + AS + + P + + T N++
Sbjct: 53 ---LINHDVVEPLYIEV-----DQIYHL--ASPASPPNYMYNPIKTLKTNTIGTLNMLGL 102
Query: 199 ATIAKVNHFIMVSS----------LGTNKFGFPAAILNLFWGVLLWKRKAEEALIA---- 244
A ++ S+ + + + KR AE A
Sbjct: 103 AKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQ 161
Query: 245 SGLPYTIVRPGGMERPTDAYKETHNITL 272
G+ + R P + ++
Sbjct: 162 EGVEVRVARIFNTFGPRMHMNDGRVVSN 189
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 53.2 bits (127), Expect = 3e-08
Identities = 33/211 (15%), Positives = 53/211 (25%), Gaps = 44/211 (20%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ G G +GS VR ++K + L + L +
Sbjct: 4 LITGGAGFIGSAVVRHIIKNTQDTVVNID------KLTYAGNLESLSDISESNRY----- 52
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDAA 199
D+ +I A+E V ITGP + T L++ A
Sbjct: 53 -NFEHADICDSAEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVA 111
Query: 200 -------TIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW-----------------K 235
K N+F +G + V L K
Sbjct: 112 RKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFTETTAYAPSSPYSASK 171
Query: 236 RKAEEALIA----SGLPYTIVRPGGMERPTD 262
++ + A GLP + P
Sbjct: 172 ASSDHLVRAWRRTYGLPTIVTNCSNNYGPYH 202
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 52.5 bits (125), Expect = 4e-08
Identities = 33/197 (16%), Positives = 52/197 (26%), Gaps = 30/197 (15%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
A + G TG+ GS LL+ G+ V R + V + D N
Sbjct: 4 ALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFN--TERVDHIYQDPHTCNPKF---- 57
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFD-ITGP---YRIDFQATKNLVDA 198
L DL + L + V P +D T L++A
Sbjct: 58 --HLHYGDLSDTSNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEA 115
Query: 199 ATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALIA--- 244
+ F S+ G + P + + + K A +
Sbjct: 116 IRFLGLEKKTRFYQASTSELYGLVQEIPQKETTPFYPRSPYA---VAKLYAYWITVNYRE 172
Query: 245 -SGLPYTIVRPGGMERP 260
G+ E P
Sbjct: 173 SYGMYACNGILFNHESP 189
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} Length = 342 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Score = 52.5 bits (124), Expect = 4e-08
Identities = 30/139 (21%), Positives = 45/139 (32%), Gaps = 13/139 (9%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V GA G V S V +LL+ G++VR RS + NL +
Sbjct: 15 LVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPG-----------RF 63
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAA-TIA 202
V D+ K+ + + A+ V T N + AA
Sbjct: 64 ETAVVEDMLKQGAYDEVIKGAAGVAHIASVVSFSNKYDE-VVTPAIGGTLNALRAAAATP 122
Query: 203 KVNHFIMVSSLGTNKFGFP 221
V F++ SS + P
Sbjct: 123 SVKRFVLTSSTVSALIPKP 141
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 29/132 (21%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G +G +GS T +LL+ G V +++ ++ L K
Sbjct: 4 LVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE------RLGGKHP----- 52
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV-FDITGP---YRIDFQATKNLVDAA 199
VE D+ + L + ++ A K V + P Y + T L+ A
Sbjct: 53 -TFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAM 111
Query: 200 TIAKVNHFIMVS 211
A V +FI S
Sbjct: 112 RAANVKNFIFSS 123
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Score = 47.7 bits (112), Expect = 1e-06
Identities = 35/199 (17%), Positives = 59/199 (29%), Gaps = 29/199 (14%)
Query: 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQP 140
N+A + G TG+ GS LL+ G+ V VR S +++ N
Sbjct: 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVR-------RSSSFNTGRIEHLYKNPQAHI 54
Query: 141 VEMLELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLV 196
++L DL + + ++ V +D T L+
Sbjct: 55 EGNMKLHYGDLTDSTCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLL 114
Query: 197 DAATIAKVNH---FIMVSS---LGTNKFG-----FPAAILNLFWGVLLWKRKAEEALI-- 243
DA + + F S+ G + P + + G K A ++
Sbjct: 115 DAVKTCGLINSVKFYQASTSELYGKVQEIPQKETTPFYPRSPY-GA--AKLYAYWIVVNF 171
Query: 244 --ASGLPYTIVRPGGMERP 260
A L E P
Sbjct: 172 REAYNLFAVNGILFNHESP 190
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} Length = 341 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Score = 47.6 bits (112), Expect = 1e-06
Identities = 31/197 (15%), Positives = 63/197 (31%), Gaps = 27/197 (13%)
Query: 85 VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEML 144
+ G G +GS + LLKL +V + + V+ + + + +N
Sbjct: 21 ITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSN--------F 72
Query: 145 ELVECDLE--KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA 202
+ ++ D+ A + + +G+ + + D + N++ AA A
Sbjct: 73 KFIQGDIRNLDDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDA 132
Query: 203 KVNHFIMVSSLGTNKFGFPAAI-------LNLFWGVLLWKRKAEEALIA----SGLPYTI 251
KV F +S ++ +G + + K E G
Sbjct: 133 KVQSFTYAAS--SSTYGDHPGLPKVEDTIGKPLSPYAVTKYVNELYADVFSRCYGFSTIG 190
Query: 252 VRPG----GMERPTDAY 264
+R + P AY
Sbjct: 191 LRYFNVFGRRQDPNGAY 207
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} Length = 315 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Score = 46.0 bits (108), Expect = 4e-06
Identities = 31/195 (15%), Positives = 52/195 (26%), Gaps = 42/195 (21%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
F+AG G VGS R+L + G + + L + +
Sbjct: 6 FIAGHRGMVGSAIRRQLEQRGDVELVLRT---------------RDELNLLDSR----AV 46
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAK 203
+ + +V + +G + N++ AA
Sbjct: 47 HDFFASERIDQVYLA---------AAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQND 97
Query: 204 VNHFIMVSSLGT--NKFGFPAAILNLFWGVLLW--------KRKAEEALIA----SGLPY 249
VN + + S P A L G L K + + G Y
Sbjct: 98 VNKLLFLGSSCIYPKLAKQPMAESELLQGTLEPTNEPYAIAKIAGIKLCESYNRQYGRDY 157
Query: 250 TIVRPGGMERPTDAY 264
V P + P D +
Sbjct: 158 RSVMPTNLYGPHDNF 172
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} Length = 338 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Score = 45.9 bits (107), Expect = 5e-06
Identities = 23/133 (17%), Positives = 41/133 (30%), Gaps = 17/133 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ G G +GS L G + +NL + L +
Sbjct: 4 LITGGCGFLGSNLASFALSQGIDLIV-------FDNLSRKGATDNLHWLSSLGNF----- 51
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV----FDITGPYRIDFQATKNLVDAA 199
E V D+ + + + C A + + + + I+ T NL++A
Sbjct: 52 -EFVHGDIRNKNDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAV 110
Query: 200 TIAKVNHFIMVSS 212
N I+ SS
Sbjct: 111 RQYNSNCNIIYSS 123
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 339 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.5 bits (101), Expect = 3e-05
Identities = 28/224 (12%), Positives = 54/224 (24%), Gaps = 32/224 (14%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
A + G TG+ GS LL G+ V +R + +++ +
Sbjct: 4 ALITGITGQDGSYLTEFLLGKGYEVHGLIR-------RSSNFNTQRINHIYIDPHNVNKA 56
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASE----------KEVFDITGPYRIDFQAT 192
+++L DL + + A++ D+ +
Sbjct: 57 LMKLHYADLTDASSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEA 116
Query: 193 KNLVDAATIAKVNHFIMVSSLGTNKFGFPA---AILNLFWGVLLWKRKAEEALIA----S 245
+ V ++ SS P + K A +
Sbjct: 117 VRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSETTPFHPRSPYAASKCAAHWYTVNYREAY 176
Query: 246 GLPYTIVRP----GGMERPTDAYK----ETHNITLSQEDTLFGG 281
GL + I + + LF G
Sbjct: 177 GLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLG 220
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 363 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 43.0 bits (100), Expect = 5e-05
Identities = 29/207 (14%), Positives = 48/207 (23%), Gaps = 42/207 (20%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
+ GA G + S R L G V A D + + +
Sbjct: 19 SITGAGGFIASHIARRLKHEGHYVIA-------------------SDWKKNEHMTEDMFC 59
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGA---SEKEVFDITGPYRIDFQATKNLVDAAT 200
E DL V + + + + N+++AA
Sbjct: 60 DEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAAR 119
Query: 201 IAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW--------------KRKAEEALIA-- 244
I + F SS + + + K EE
Sbjct: 120 INGIKRFFYASS--ACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYN 177
Query: 245 --SGLPYTIVRPGGMERPTDAYKETHN 269
G+ I R + P +K
Sbjct: 178 KDFGIECRIGRFHNIYGPFGTWKGGRE 204
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} Length = 212 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Score = 39.4 bits (90), Expect = 4e-04
Identities = 9/43 (20%), Positives = 15/43 (34%), Gaps = 8/43 (18%)
Query: 71 TPTKADSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113
TP + +AGATG G + +L + +
Sbjct: 1 TPKRV--------LLAGATGLTGEHLLDRILSEPTLAKVIAPA 35
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 393 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Score = 40.3 bits (92), Expect = 4e-04
Identities = 13/91 (14%), Positives = 23/91 (25%), Gaps = 4/91 (4%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRA----GVRSVQRAENLVQSVKQMKLDGELANKGIQ 139
V G G G T L K + V R L + ++
Sbjct: 5 MVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL 64
Query: 140 PVEMLELVECDLEKRVQIEPALGNASVVICC 170
+ +EL D+ + + +
Sbjct: 65 TGKSIELYVGDICDFEFLAESFKSFEPDSVV 95
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} Length = 356 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Score = 39.4 bits (90), Expect = 6e-04
Identities = 10/46 (21%), Positives = 17/46 (36%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK 128
FV G TG G L +G V+ + +L ++ +
Sbjct: 11 VFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVAD 56
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} Length = 321 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Score = 38.8 bits (89), Expect = 0.001
Identities = 12/30 (40%), Positives = 17/30 (56%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVR 112
A V G TG+ G+ + LL+ G+RV V
Sbjct: 3 ALVTGITGQDGAYLAKLLLEKGYRVHGLVA 32
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Score = 38.5 bits (88), Expect = 0.001
Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 6/95 (6%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G G +GS TV ELL+ G+ + ++ EL + +
Sbjct: 6 LVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSV----- 60
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEV 178
E E D+ + ++ S + A K V
Sbjct: 61 -EFEEMDILDQGALQRLFKKYSFMAVIHFAGLKAV 94
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Length = 232 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.4 bits (85), Expect = 0.002
Identities = 10/32 (31%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 84 FVAGATGKVGSRTVRELLKLGF--RVRAGVRS 113
F+ GA+G+ G ++E+L+ G +V R
Sbjct: 18 FILGASGETGRVLLKEILEQGLFSKVTLIGRR 49
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 347 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Score = 38.1 bits (87), Expect = 0.002
Identities = 29/130 (22%), Positives = 45/130 (34%), Gaps = 16/130 (12%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G G +GS TV EL++ G+ A+NL S +A +
Sbjct: 5 LVTGGAGYIGSHTVVELIENGYDCVV-------ADNLSNSTY-----DSVARLEVLTKHH 52
Query: 144 LELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGP----YRIDFQATKNLVDAA 199
+ E DL R +E + A K V + T Y + T L++
Sbjct: 53 IPFYEVDLCDRKGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELM 112
Query: 200 TIAKVNHFIM 209
V+ F+
Sbjct: 113 QQYNVSKFVF 122
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 302 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 37.7 bits (87), Expect = 0.002
Identities = 34/192 (17%), Positives = 52/192 (27%), Gaps = 11/192 (5%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
V GA G +G + G V S K+ E+ +G + V
Sbjct: 10 VLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVA 69
Query: 143 MLELVECDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNL--VDAAT 200
+ VE + G VV+ G F D +L T
Sbjct: 70 NYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVT 129
Query: 201 IAKVNHF--------IMVSSLGTNKFGFPAAILNLF-WGVLLWKRKAEEALIASGLPYTI 251
A +H IM +S F A + G+L + +
Sbjct: 130 RAAWDHMKKQNYGRIIMTASASGIYGNFGQANYSAAKLGLLGLANTLVIEGRKNNIHCNT 189
Query: 252 VRPGGMERPTDA 263
+ P R T+
Sbjct: 190 IAPNAGSRMTET 201
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} Length = 257 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Score = 36.8 bits (85), Expect = 0.003
Identities = 36/205 (17%), Positives = 69/205 (33%), Gaps = 41/205 (20%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
A V GA+G +G+ R L++ G +V R+V E L K G
Sbjct: 13 ALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGT---------- 62
Query: 143 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASE------------KEVFDI-- 181
L CDL I + I G + K++F++
Sbjct: 63 -LIPYRCDLSNEEDILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNV 121
Query: 182 TGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLF----WGVLLWKR- 236
+A +++ + H I ++S+ ++ P ++ + + + V
Sbjct: 122 LALSICTREAYQSMKERN--VDDGHIININSMSGHR-VLPLSVTHFYSATKYAVTALTEG 178
Query: 237 -KAEEALIASGLPYTIVRPGGMERP 260
+ E + + T + PG +E
Sbjct: 179 LRQELREAQTHIRATCISPGVVETQ 203
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} Length = 297 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 37.0 bits (85), Expect = 0.003
Identities = 33/196 (16%), Positives = 67/196 (34%), Gaps = 25/196 (12%)
Query: 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE 142
A V G +G V+ELL+LG V R ++R ++ ++ + A
Sbjct: 15 AIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQAR------- 67
Query: 143 MLELVECDLEKRVQIEPA-------LGNASVVICCIGASEKEVFDITGP------YRIDF 189
+ ++C++ ++ G + ++ G + +
Sbjct: 68 -VIPIQCNIRNEEEVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNL 126
Query: 190 QATKNLVDAATIAKV--NHFIMVSSLGTNKFGFPAAILNLF--WGVLLWKRKAEEALIAS 245
T + A + + + +V+ + K GFP A+ + GV + S
Sbjct: 127 TGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGFPLAVHSGAARAGVYNLTKSLALEWACS 186
Query: 246 GLPYTIVRPGGMERPT 261
G+ V PG + T
Sbjct: 187 GIRINCVAPGVIYSQT 202
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 346 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 36.9 bits (84), Expect = 0.004
Identities = 16/87 (18%), Positives = 30/87 (34%), Gaps = 12/87 (13%)
Query: 84 FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEM 143
V G G +GS V + V V + L + + L+ L ++
Sbjct: 6 IVTGGAGFIGSNFVHYVYNNHPDVHVTVL-----DKLTYAGNKANLEAILGDR------- 53
Query: 144 LELVECDLEKRVQIEPALGNASVVICC 170
+ELV D+ ++ A ++
Sbjct: 54 VELVVGDIADAELVDKLAAKADAIVHY 80
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 446 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.98 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.97 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.97 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.96 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.96 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.96 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.96 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.96 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.96 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.96 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.95 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.95 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.95 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.95 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.95 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.94 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.94 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.94 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.94 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.94 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.93 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.93 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.93 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.92 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.92 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 99.92 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 99.92 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 99.91 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 99.91 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 99.91 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 99.91 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 99.91 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 99.91 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 99.9 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 99.9 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 99.9 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.9 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 99.9 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 99.9 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 99.9 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 99.9 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 99.9 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 99.9 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 99.9 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 99.9 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 99.9 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 99.9 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.9 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 99.9 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 99.89 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 99.89 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.89 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 99.89 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 99.89 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 99.89 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 99.89 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 99.89 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 99.89 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 99.88 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 99.88 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 99.88 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 99.88 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 99.88 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 99.87 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 99.87 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.87 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 99.86 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 99.86 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.86 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 99.86 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 99.85 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 99.85 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 99.85 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 99.85 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 99.84 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 99.84 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 99.84 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 99.84 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 99.83 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 99.83 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 99.8 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 99.79 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 99.79 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 99.79 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 99.77 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 99.76 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 99.75 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 99.75 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 99.75 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 99.73 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 99.71 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 99.65 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 99.65 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 99.65 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 99.64 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 99.4 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 98.61 | |
| d1ez4a1 | 146 | Lactate dehydrogenase {Lactobacillus pentosus [Tax | 98.59 | |
| d1hyea1 | 145 | MJ0490, lactate/malate dehydrogenase {Archaeon Met | 98.42 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 98.41 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 98.36 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 98.32 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 98.29 | |
| d1pzga1 | 154 | Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5 | 98.24 | |
| d2ldxa1 | 159 | Lactate dehydrogenase {Mouse (Mus musculus) [TaxId | 98.15 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 98.13 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 98.12 | |
| d1i0za1 | 160 | Lactate dehydrogenase {Human (Homo sapiens), heart | 98.11 | |
| d1hyha1 | 146 | L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La | 98.06 | |
| d1o6za1 | 142 | Malate dehydrogenase {Archaeon Haloarcula marismor | 98.06 | |
| d1a5za1 | 140 | Lactate dehydrogenase {Thermotoga maritima [TaxId: | 98.05 | |
| d1ojua1 | 142 | Malate dehydrogenase {Archaeon Archaeoglobus fulgi | 98.02 | |
| d1llda1 | 143 | Lactate dehydrogenase {Bifidobacterium longum, str | 98.01 | |
| d1guza1 | 142 | Malate dehydrogenase {Chlorobium vibrioforme [TaxI | 98.01 | |
| d1y7ta1 | 154 | Malate dehydrogenase {Thermus thermophilus [TaxId: | 97.97 | |
| d1y6ja1 | 142 | Lactate dehydrogenase {Clostridium thermocellum [T | 97.96 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 97.86 | |
| d1uxja1 | 142 | Malate dehydrogenase {Chloroflexus aurantiacus [Ta | 97.84 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.84 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.8 | |
| d1t2da1 | 150 | Lactate dehydrogenase {Malaria parasite (Plasmodiu | 97.79 | |
| d5mdha1 | 154 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 97.77 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 97.73 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 97.72 | |
| d7mdha1 | 175 | Malate dehydrogenase {Sorghum (Sorghum vulgare), c | 97.72 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 97.65 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 97.63 | |
| d1u7za_ | 223 | Coenzyme A biosynthesis bifunctional protein CoaBC | 97.6 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 97.59 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 97.59 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 97.54 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 97.5 | |
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 97.46 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.41 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 97.41 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 97.38 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 97.35 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 97.33 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 97.33 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 97.33 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 97.24 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 97.23 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 97.23 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 97.15 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 97.14 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 97.12 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 97.12 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 97.11 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 97.11 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 97.09 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 97.08 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 97.07 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 97.06 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 97.01 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 97.0 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 96.99 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.97 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 96.9 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 96.88 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 96.86 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 96.86 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 96.84 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 96.82 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 96.79 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 96.75 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 96.66 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 96.66 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 96.65 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.61 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.61 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 96.6 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 96.39 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.34 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 96.32 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 96.31 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 96.3 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.28 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 96.27 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 96.26 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 96.24 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 96.22 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 96.19 | |
| d1obba1 | 171 | Alpha-glucosidase AglA {Thermotoga maritima [TaxId | 96.13 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 96.12 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 96.11 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 96.04 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.95 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 95.94 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 95.94 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 95.76 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 95.54 | |
| d1dlja2 | 196 | UDP-glucose dehydrogenase (UDPGDH) {Streptococcus | 95.52 | |
| d2csua1 | 129 | Acetate-CoA ligase alpha chain, AcdA, N-terminal d | 95.49 | |
| d1y81a1 | 116 | Hypothetical protein PF0725 {Pyrococcus furiosus [ | 95.45 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 95.39 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 95.37 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 95.32 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 95.27 | |
| d2d59a1 | 139 | Hypothetical protein PH1109 {Pyrococcus horikoshii | 95.24 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.23 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 95.23 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 95.18 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 95.12 | |
| d1yovb1 | 426 | UBA3 {Human (Homo sapiens) [TaxId: 9606]} | 94.92 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 94.77 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.77 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 94.76 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 94.73 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 94.63 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.55 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 94.47 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 94.35 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 94.29 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 94.28 | |
| d1yova1 | 529 | Amyloid beta precursor protein-binding protein 1, | 94.27 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 94.27 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 94.25 | |
| d1s6ya1 | 169 | 6-phospho-beta-glucosidase {Bacillus stearothermop | 94.2 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.18 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 93.98 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 93.98 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 93.95 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 93.9 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.89 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 93.82 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 93.74 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 93.56 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 93.51 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 93.49 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 93.44 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 93.39 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 93.31 | |
| d2cvza2 | 156 | Hydroxyisobutyrate dehydrogenase {Thermus thermoph | 93.28 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 93.26 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 93.14 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 93.1 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.04 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 93.01 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 92.99 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.81 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 92.62 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 92.56 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 92.39 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 92.29 | |
| d1up7a1 | 162 | 6-phospho-beta-glucosidase {Thermotoga maritima [T | 92.17 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 92.11 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 92.02 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 91.95 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 91.94 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 91.81 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 91.61 | |
| d1x7da_ | 340 | Ornithine cyclodeaminase {Pseudomonas putida [TaxI | 91.5 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 91.41 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 91.22 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 91.21 | |
| d1ryia1 | 276 | Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | 91.07 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 90.8 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 90.57 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 90.53 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 90.31 | |
| d1a9xa4 | 121 | Carbamoyl phosphate synthetase (CPS), large subuni | 90.11 | |
| d2bcgg1 | 297 | Guanine nucleotide dissociation inhibitor, GDI {Ba | 90.09 | |
| d1iuka_ | 136 | Hypothetical protein TT1466 {Thermus thermophilus | 90.02 | |
| d2dt5a2 | 126 | Transcriptional repressor Rex, C-terminal domain { | 89.77 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 89.54 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 89.35 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 89.32 | |
| d1vjta1 | 193 | Putative alpha-glucosidase TM0752 {Thermotoga mari | 89.04 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 88.45 | |
| d1gsoa2 | 105 | Glycinamide ribonucleotide synthetase (GAR-syn), N | 88.32 | |
| d2gv8a1 | 335 | Flavin-dependent monoxygenase SPBP16F5.08c {Schizo | 88.07 | |
| d2gf3a1 | 281 | Sarcosine oxidase {Bacillus sp., strain b0618 [Tax | 87.64 | |
| d1w5fa1 | 194 | Cell-division protein FtsZ {Thermotoga maritima [T | 87.2 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 87.14 | |
| d1nhpa1 | 198 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 87.14 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 86.8 | |
| d1omoa_ | 320 | Archaeal alanine dehydrogenase {Archaeon Archaeogl | 86.7 | |
| d1p9oa_ | 290 | Phosphopantothenoylcysteine synthetase {Human (Hom | 86.69 | |
| d2vapa1 | 209 | Cell-division protein FtsZ {Archaeon Methanococcus | 86.43 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 86.21 | |
| d2blna2 | 203 | Polymyxin resistance protein ArnA, N-terminal doma | 86.06 | |
| d1pj5a2 | 305 | N,N-dimethylglycine oxidase {Arthrobacter globifor | 86.04 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 85.85 | |
| d1i8ta1 | 298 | UDP-galactopyranose mutase, N-terminal domain {Esc | 85.79 | |
| d1jyea_ | 271 | Lac-repressor (lacR) core (C-terminal domain) {Esc | 85.76 | |
| d1a9xa3 | 127 | Carbamoyl phosphate synthetase (CPS), large subuni | 85.58 | |
| d1kifa1 | 246 | D-aminoacid oxidase, N-terminal domain {Pig (Sus s | 85.55 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 85.36 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.32 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.32 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 85.27 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 85.17 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 85.06 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 84.82 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 84.78 | |
| d1uwva2 | 358 | rRNA (Uracil-5-)-methyltransferase RumA, catalytic | 84.5 | |
| d1d5ta1 | 336 | Guanine nucleotide dissociation inhibitor, GDI {Co | 84.3 | |
| d1k3ta1 | 190 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 84.01 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 83.98 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 83.81 | |
| d2v5za1 | 383 | Monoamine oxidase B {Human (Homo sapiens) [TaxId: | 83.54 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 83.23 | |
| d1xhca1 | 167 | NADH oxidase /nitrite reductase {Pyrococcus furios | 83.11 | |
| d2bisa1 | 437 | Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxI | 83.05 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 82.83 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 82.78 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 82.58 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 82.57 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 82.47 | |
| d1h9aa1 | 195 | Glucose 6-phosphate dehydrogenase, N-terminal doma | 82.34 | |
| d1n4wa1 | 367 | Cholesterol oxidase of GMC family {Streptomyces sp | 82.33 | |
| d1nv8a_ | 271 | N5-glutamine methyltransferase, HemK {Thermotoga m | 82.11 | |
| d2csua3 | 163 | Acetate-CoA ligase alpha chain, AcdA, domains 2 an | 82.02 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 82.01 | |
| d1d7ya1 | 183 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 81.79 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 81.65 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 81.23 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 81.0 | |
| d1m6ia2 | 137 | Apoptosis-inducing factor (AIF) {Human (Homo sapie | 80.81 | |
| d1rq2a1 | 198 | Cell-division protein FtsZ {Mycobacterium tubercul | 80.51 | |
| d1fmta2 | 206 | Methionyl-tRNAfmet formyltransferase {Escherichia | 80.41 | |
| d2igta1 | 309 | Putative methyltransferase Atu0340 {Agrobacterium | 80.32 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.98 E-value=2.5e-32 Score=272.16 Aligned_cols=236 Identities=14% Similarity=0.022 Sum_probs=178.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-----HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|+|||||||||||++|+++|+++|++|++++|..+. ...+... ......+++++++|++|.+
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~Dl~d~~ 68 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQD-------------PHTCNPKFHLHYGDLSDTS 68 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----------------------------------CCEEECCCCSSCHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhh-------------hhhcCCCeEEEEeecCCHH
Confidence 689999999999999999999999999999996432 2221111 1122368999999999999
Q ss_pred cHHHHhcC--CCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCC---EEEEEccccccCC-----CCchh
Q 013273 156 QIEPALGN--ASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVN---HFIMVSSLGTNKF-----GFPAA 223 (446)
Q Consensus 156 ~~~~a~~~--~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~---r~V~vSS~~~~~~-----~~~~~ 223 (446)
++++++.+ +|+|||+|+... ....++...+++|+.|+.+|+++|++.+++ ||||+||..++.. -.+++
T Consensus 69 ~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i~~SS~~vYG~~~~~~~~E~~ 148 (357)
T d1db3a_ 69 NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQASTSELYGLVQEIPQKETT 148 (357)
T ss_dssp HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGGTTCCSSSBCTTS
T ss_pred HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEEchhhhCCCCCCCcCCCC
Confidence 99999975 599999998643 344555667899999999999999987554 7999999877422 12344
Q ss_pred hhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccC
Q 013273 224 ILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVS 284 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~ 284 (446)
+..|.+.|+.+|+.+|++++. .|++++++||+++|||+..... .........+.....++|
T Consensus 149 ~~~P~~~Y~~sK~~~E~~~~~~~~~~~l~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~ 228 (357)
T d1db3a_ 149 PFYPRSPYAVAKLYAYWITVNYRESYGMYACNGILFNHESPRRGETFVTRKITRAIANIAQGLESCLYLGNMDSLRDWGH 228 (357)
T ss_dssp CCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEE
T ss_pred CCCCCChHHHHHHHHHHHHHHHHHHhCCCEEEEEeccccCCCCCcCCCchHHHHHHHHHHhCCCceEEECCCCeeeccee
Confidence 567888999999999998873 6999999999999999532110 111111122333446899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++|+|++++.+++++. +++|||+++...++.++++++.+.+|...
T Consensus 229 v~D~~~a~~~~~~~~~---~~~yni~sg~~~s~~~~~~~~~~~~g~~~ 273 (357)
T d1db3a_ 229 AKDYVKMQWMMLQQEQ---PEDFVIATGVQYSVRQFVEMAAAQLGIKL 273 (357)
T ss_dssp HHHHHHHHHHTTSSSS---CCCEEECCCCCEEHHHHHHHHHHTTTEEE
T ss_pred echHHHHHHHHHhCCC---CCeEEECCCCceehHHHHHHHHHHhCCcc
Confidence 9999999999988754 78999999999999999999999988543
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.97 E-value=6.2e-31 Score=241.89 Aligned_cols=203 Identities=17% Similarity=0.155 Sum_probs=165.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|.+++|+||||||+||++++++|+++||+|++++|++++... ....+++++.+|+.|.+++
T Consensus 1 m~~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~-------------------~~~~~~~~~~gD~~d~~~l 61 (205)
T d1hdoa_ 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPS-------------------EGPRPAHVVVGDVLQAADV 61 (205)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCS-------------------SSCCCSEEEESCTTSHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccc-------------------ccccccccccccccchhhH
Confidence 357899999999999999999999999999999999876432 1236799999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
.+++.++|+|||++|... .....+++..++.++++++++++++|||++||.++.. ...........|...|..
T Consensus 62 ~~al~~~d~vi~~~g~~~-----~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~~~~~--~~~~~~~~~~~~~~~~~~ 134 (205)
T d1hdoa_ 62 DKTVAGQDAVIVLLGTRN-----DLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAFLLW--DPTKVPPRLQAVTDDHIR 134 (205)
T ss_dssp HHHHTTCSEEEECCCCTT-----CCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGGGTS--CTTCSCGGGHHHHHHHHH
T ss_pred HHHhcCCCEEEEEeccCC-----chhhhhhhHHHHHHHHHHHHhcCCCeEEEEeeeeccC--CCccccccccccchHHHH
Confidence 999999999999998643 2234577899999999999999999999999987732 222233445679999999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEec
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIA 311 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~ 311 (446)
+|+++++.|++||||||+++++... .....+.........+|+++|+|++++.+++++. ..++.+.+..
T Consensus 135 ~e~~l~~~~~~~tiirp~~~~~~~~----~~~~~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~-~~g~~~~~s~ 203 (205)
T d1hdoa_ 135 MHKVLRESGLKYVAVMPPHIGDQPL----TGAYTVTLDGRGPSRVISKHDLGHFMLRCLTTDE-YDGHSTYPSH 203 (205)
T ss_dssp HHHHHHHTCSEEEEECCSEEECCCC----CSCCEEESSSCSSCSEEEHHHHHHHHHHTTSCST-TTTCEEEEEC
T ss_pred HHHHHHhcCCceEEEecceecCCCC----cccEEEeeCCCCCCCcCCHHHHHHHHHHHhCCCC-CCCEEEecCC
Confidence 9999999999999999999986421 2223333334445578999999999999999887 5688887765
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.97 E-value=9.8e-30 Score=253.01 Aligned_cols=236 Identities=15% Similarity=0.030 Sum_probs=184.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|.+.|+|||||||||||++|+++|+++|++|++++|....... .......+..+|+.|.+.
T Consensus 12 ~~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~-------------------~~~~~~~~~~~D~~~~~~ 72 (363)
T d2c5aa1 12 PSENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMT-------------------EDMFCDEFHLVDLRVMEN 72 (363)
T ss_dssp TTSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSC-------------------GGGTCSEEEECCTTSHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchh-------------------hhcccCcEEEeechhHHH
Confidence 4567899999999999999999999999999999876542110 112466888999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCc---cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC------------c
Q 013273 157 IEPALGNASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------------P 221 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~---~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~------------~ 221 (446)
+.+++.++|+|||+|+..... .......+.+|+.++.+++++|++++++|||++||..++.... +
T Consensus 73 ~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~~~vk~~i~~SS~~~~~~~~~~~~~~~~~~~~e 152 (363)
T d2c5aa1 73 CLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARINGIKRFFYASSACIYPEFKQLETTNVSLKESD 152 (363)
T ss_dssp HHHHHTTCSEEEECCCCCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEGGGSCGGGSSSSSSCEECGGG
T ss_pred HHHHhhcCCeEeecccccccccccccccccccccccchhhHHHHhHHhhCcccccccccccccccccccccccccccccc
Confidence 999999999999999865432 2334455778999999999999999999999999987643211 1
Q ss_pred hhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccc----------------ceeecccCcccCC
Q 013273 222 AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH----------------NITLSQEDTLFGG 281 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~----------------~~~~~~~~~~~~~ 281 (446)
..+..|.+.|+.+|..+|++++ ..|++++++||+++||+.+...... .......+.....
T Consensus 153 ~~~~~p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd 232 (363)
T d2c5aa1 153 AWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRS 232 (363)
T ss_dssp GSSBCCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSCCCHHHHHHHHHHHCSSCEEEESCSCCEEC
T ss_pred CCcCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccccccccccccccccccccccccCCCCeEEE
Confidence 1234567789999999999886 3699999999999999975431111 1111112233446
Q ss_pred ccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 282 QVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
++|++|++++++.+++++. +++|||+++...++.++.+++.++.+.....
T Consensus 233 ~i~v~D~~~~~~~~~~~~~---~~~~ni~~~~~~s~~~l~~~i~~~~g~~~~i 282 (363)
T d2c5aa1 233 FTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKLPI 282 (363)
T ss_dssp CEEHHHHHHHHHHHHHSSC---CSCEEECCCCCEEHHHHHHHHHHTTTCCCCE
T ss_pred EeehhHHHHHHHHHHhCCC---CCeEEEecCCcccHHHHHHHHHHHhCCCCce
Confidence 8999999999999998764 7899999999999999999999999876543
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=1e-30 Score=255.58 Aligned_cols=230 Identities=13% Similarity=0.089 Sum_probs=173.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+|+|||||||||||++|+++|+++|++|++++|.... ...+. ......++++...|+. +
T Consensus 1 kKKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~---------------~~~~~~~~d~~~~~~~-----~ 60 (312)
T d2b69a1 1 RKRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVE---------------HWIGHENFELINHDVV-----E 60 (312)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTG---------------GGTTCTTEEEEECCTT-----S
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHHH---------------HhcCCCceEEEehHHH-----H
Confidence 4789999999999999999999999999999874321 11110 1112245666666664 4
Q ss_pred HHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC----------chhhhc
Q 013273 159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF----------PAAILN 226 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~----------~~~~~~ 226 (446)
.++.++|+|||+|+.... ...++...+++|+.|+.+|+++|++.++ +|||+||..++.... +..+..
T Consensus 61 ~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~~~-k~I~~SS~~vy~~~~~~~~~e~~~~~~~~~~ 139 (312)
T d2b69a1 61 PLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGA-RLLLASTSEVYGDPEVHPQSEDYWGHVNPIG 139 (312)
T ss_dssp CCCCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTC-EEEEEEEGGGGBSCSSSSBCTTCCCBCCSSS
T ss_pred HHHcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHcCC-cEEEEEChheecCCCCCCCCccccCCCCCCC
Confidence 455689999999986542 2344556689999999999999999987 899999987743211 112346
Q ss_pred hhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc-------------cceeecccCcccCCccCHHHHH
Q 013273 227 LFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET-------------HNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~-------------~~~~~~~~~~~~~~~v~~~DvA 289 (446)
|.+.|+.+|..+|.+++ .+|++++++||+.+|||++..... ..+.+...+.....++|++|+|
T Consensus 140 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~ 219 (312)
T d2b69a1 140 PRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLV 219 (312)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCcEEEEEeeeEECCCCCCCCccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHH
Confidence 78899999999999986 469999999999999997543221 1112222233344689999999
Q ss_pred HHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 290 ELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 290 ~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++++.+++... +++||++++...++.++.+++.++++....
T Consensus 220 ~~~~~~~~~~~---~~~~n~~~~~~~~~~~~~~~i~~~~~~~~~ 260 (312)
T d2b69a1 220 NGLVALMNSNV---SSPVNLGNPEEHTILEFAQLIKNLVGSGSE 260 (312)
T ss_dssp HHHHHHHTSSC---CSCEEESCCCEEEHHHHHHHHHHHHTCCCC
T ss_pred HHHHHHHhhcc---CCceEecCCcccchhhHHHHHHHHhCCCCc
Confidence 99999987664 778999999999999999999999987654
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.7e-29 Score=249.28 Aligned_cols=241 Identities=15% Similarity=0.087 Sum_probs=180.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|++.|+++|++|++++|............+.. ...++.++++|++|.+.+.++
T Consensus 1 MKiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~~~l~~~ 68 (338)
T d1udca_ 1 MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERL------------GGKHPTFVEGDIRNEALMTEI 68 (338)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHH------------HTSCCEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhh------------cCCCCEEEEeecCCHHHHHHH
Confidence 67999999999999999999999999999987332211111111111 016899999999999999999
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC------chhhhchhhH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF------PAAILNLFWG 230 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~------~~~~~~~~~~ 230 (446)
+. ++|+|||+|+.... ...++...+++|+.|+.+++++|++.++++||++||..++.... ......+.+.
T Consensus 69 ~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~~~v~~~i~~Ss~~vy~~~~~~~~~e~~~~~~p~~~ 148 (338)
T d1udca_ 69 LHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDQPKIPYVESFPTGTPQSP 148 (338)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCSCCSSSBCTTSCCCCCSSH
T ss_pred HhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHHhCCCEEEecCcceEEccccccccccccccCCCcch
Confidence 96 79999999986432 23455667899999999999999999999999999987753321 1223467888
Q ss_pred HHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCccccc----------------------ccceeeccc------Cc
Q 013273 231 VLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE----------------------THNITLSQE------DT 277 (446)
Q Consensus 231 Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~----------------------~~~~~~~~~------~~ 277 (446)
|+.+|..+|+++.+ .+++++++|++++||++..... ...+.+... ..
T Consensus 149 Y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~ 228 (338)
T d1udca_ 149 YGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGT 228 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHSTTCEEEEEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSS
T ss_pred HHHHHhhhhHHHHHHHhhccCCeEEEEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCC
Confidence 99999999998863 5899999999999998543210 001111111 12
Q ss_pred ccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
....++|++|++.++..+..... ...+++||++++...++.++.+.+.+++|....
T Consensus 229 ~~rd~i~v~D~~~~~~~~~~~~~~~~~~~i~Ni~~~~~~si~e~~~~i~~~~g~~~~ 285 (338)
T d1udca_ 229 GVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVN 285 (338)
T ss_dssp CEECEEEHHHHHHHHHHHHHHHTTCCEEEEEEESCSSCEEHHHHHHHHHHHHTSCCC
T ss_pred ceeeEEEEeehhhhccccccccccccCcceeeecCCCCCcHHHHHHHHHHHHCCCCc
Confidence 22357999999988877665321 135789999999999999999999999986554
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.96 E-value=1.3e-29 Score=250.24 Aligned_cols=248 Identities=13% Similarity=0.045 Sum_probs=191.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|+|||||||||||++|+++|+++|++|++++|.......-...+...... ....+++++.+|+.|...+
T Consensus 14 ~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~d~~d~~~~ 85 (341)
T d1sb8a_ 14 AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSE--------KQWSNFKFIQGDIRNLDDC 85 (341)
T ss_dssp HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCH--------HHHTTEEEEECCTTSHHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHHhhhh--------cccCCeeEEeecccccccc
Confidence 35679999999999999999999999999999997433211111111111000 1126799999999999999
Q ss_pred HHHhcCCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhH
Q 013273 158 EPALGNASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
.....+.+.|+|+++... ....++...+++|+.|+.+|+++|.++++++|||+||..++... .++.+.+|.+.
T Consensus 86 ~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~~~~~p~~~ 165 (341)
T d1sb8a_ 86 NNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKVQSFTYAASSSTYGDHPGLPKVEDTIGKPLSP 165 (341)
T ss_dssp HHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGGTTCCCSSBCTTCCCCCCSH
T ss_pred ccccccccccccccccccccccccCccchhheeehhHHHHHHHHHhcCCceEEEcccceeeCCCCCCCccCCCCCCCCCc
Confidence 999999999999987542 23445566788999999999999999999999999998874422 34456778899
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccccc---------------ceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETH---------------NITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~---------------~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|..+|++++ ..+++++++||+++||+++...... .+.+...+.....++|++|+|.+
T Consensus 166 Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~v~G~~~~~~~~~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a 245 (341)
T d1sb8a_ 166 YAVTKYVNELYADVFSRCYGFSTIGLRYFNVFGRRQDPNGAYAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQA 245 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCCEEEEECCEECTTCCCCSTTCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCeEEEEeceeeccCcCCCCchhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchh
Confidence 9999999999876 3689999999999999965432111 11222223334478999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+..++.......+++||++.+...++.++++++.+.++....
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~si~~i~~~i~~~~~~~~~ 287 (341)
T d1sb8a_ 246 NLLAATAGLDARNQVYNIAVGGRTSLNQLFFALRDGLAENGV 287 (341)
T ss_dssp HHHHHTCCGGGCSEEEEESCSCCEEHHHHHHHHHHHHHHTTC
T ss_pred hhhhhhccccccceeeeecccccchHHHHHHHHHHHhccccc
Confidence 999998765456889999999999999999999999886654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.96 E-value=5.3e-30 Score=251.12 Aligned_cols=235 Identities=15% Similarity=0.062 Sum_probs=182.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeE------EEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRV------RAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V------~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
|+|||||||||||++|++.|+++|++| +.+++... ....+ . ......++.++.+|+.
T Consensus 1 MkIlItG~tGfIG~~l~~~L~~~g~~v~~~~~i~~~d~~~~~~~~~~~----~-----------~~~~~~~~~~~~~d~~ 65 (322)
T d1r6da_ 1 MRLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANL----A-----------PVDADPRLRFVHGDIR 65 (322)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGG----G-----------GGTTCTTEEEEECCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCccCCceEEEEeCCCccccHhHh----h-----------hhhcCCCeEEEEeccc
Confidence 689999999999999999999999754 44443211 10000 0 0112368999999999
Q ss_pred ChhcHHHHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----Cchhhh
Q 013273 153 KRVQIEPALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAIL 225 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~ 225 (446)
+...+...+..+|.|||+|+.... ...++...+++|+.|+.+++++|.+.++++|||+||..++... .++.+.
T Consensus 66 ~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~I~~Ss~~~yg~~~~~~~~E~~~~ 145 (322)
T d1r6da_ 66 DAGLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGVGRVVHVSTNQVYGSIDSGSWTESSPL 145 (322)
T ss_dssp CHHHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGGGCCCSSSCBCTTSCC
T ss_pred cchhhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHHcCCceEEEeecceeecCCCCCCCCCCCCC
Confidence 999999999999999999976432 2334556678999999999999999999999999998774322 344566
Q ss_pred chhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccCHHHHHH
Q 013273 226 NLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 226 ~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.|.+.|+.+|..+|.+++ ++|++++++||+.+|||++... ....+.+...+.....++|++|+|+
T Consensus 146 ~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ 225 (322)
T d1r6da_ 146 EPNSPYAASKAGSDLVARAYHRTYGLDVRITRCCNNYGPYQHPEKLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCR 225 (322)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTTSHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEECcCCCcCcHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHH
Confidence 788899999999999886 4699999999999999976431 1122222233344446899999999
Q ss_pred HHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 291 LLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 291 ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
+++.+++++. .+++||++++...++.++.+.+.+.++...
T Consensus 226 ai~~~~~~~~--~~~~~ni~~~~~~s~~e~~~~i~~~~~~~~ 265 (322)
T d1r6da_ 226 GIALVLAGGR--AGEIYHIGGGLELTNRELTGILLDSLGADW 265 (322)
T ss_dssp HHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHTCCG
T ss_pred HHHHHHhCCC--CCCeeEEeecccchhHHHHHHHHHHhCCCc
Confidence 9999999875 478999999999999999999999998754
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.96 E-value=4e-30 Score=256.59 Aligned_cols=237 Identities=13% Similarity=0.073 Sum_probs=178.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++|++|++..++....... +.+ .......+++++++|++|...+.++
T Consensus 1 MkILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~-~~~-----------~~~~~~~~~~~~~~Dl~d~~~l~~~ 68 (361)
T d1kewa_ 1 MKILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNL-ESL-----------SDISESNRYNFEHADICDSAEITRI 68 (361)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCG-GGG-----------TTTTTCTTEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccH-HHH-----------HhhhhcCCcEEEEccCCCHHHHHHH
Confidence 6899999999999999999999999876655443211100 000 1122347899999999999999999
Q ss_pred hc--CCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCC---------CCEEEEEccccccCCCC-------
Q 013273 161 LG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAK---------VNHFIMVSSLGTNKFGF------- 220 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~---------v~r~V~vSS~~~~~~~~------- 220 (446)
+. ++|+|||+|+... ....++...+++|+.|+.+++++|++.+ +++||++||..++....
T Consensus 69 ~~~~~~d~VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~ 148 (361)
T d1kewa_ 69 FEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVEN 148 (361)
T ss_dssp HHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCT
T ss_pred HHhCCCCEEEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCcccc
Confidence 86 5899999998643 2334566778999999999999998754 45999999987743211
Q ss_pred --------chhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccc-----------cccceeecccCc
Q 013273 221 --------PAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDT 277 (446)
Q Consensus 221 --------~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~ 277 (446)
+.....|.+.|+.+|..+|.+++. +|++++++||+++|||++... ....+.+...+.
T Consensus 149 ~~~~~~~~e~~~~~p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~~~~~i~~~i~~~~~g~~~~v~g~g~ 228 (361)
T d1kewa_ 149 SVTLPLFTETTAYAPSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHFPEKLIPLVILNALEGKPLPIYGKGD 228 (361)
T ss_dssp TSCCCCBCTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTTSHHHHHHHHHHHTCCEEEETTSC
T ss_pred ccCCCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCCcCcHHHHHHHHHHcCCCcEEeCCCC
Confidence 123356778899999999999863 799999999999999975321 011222222333
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~ 331 (446)
....++|++|+|++++.++++.. .+++|||+++...+..++.+.+.+.++..
T Consensus 229 ~~r~~i~v~D~a~ai~~~~~~~~--~~~~~Ni~s~~~~s~~~~~~~i~~~~~~~ 280 (361)
T d1kewa_ 229 QIRDWLYVEDHARALHMVVTEGK--AGETYNIGGHNEKKNLDVVFTICDLLDEI 280 (361)
T ss_dssp CEEEEEEHHHHHHHHHHHHHHCC--TTCEEEECCCCEEEHHHHHHHHHHHHHHH
T ss_pred eEEeCEEHHHHHHHHHHHHhcCC--CCCeEEECCCCCcchHHHHhHhhhhcccc
Confidence 34468999999999999999875 47899999999889999999888776443
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.96 E-value=2.7e-28 Score=241.12 Aligned_cols=242 Identities=18% Similarity=0.096 Sum_probs=180.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|||||||||||++|+++|+++|++|++++|+.++...+....... .......++.+|+.|.+.
T Consensus 8 ~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~-----------~~~~~~~~~~~Dl~~~~~ 76 (342)
T d1y1pa1 8 LPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAK-----------YPGRFETAVVEDMLKQGA 76 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH-----------STTTEEEEECSCTTSTTT
T ss_pred CCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhcc-----------ccccccEEEeccccchhh
Confidence 456789999999999999999999999999999999988776655433222 111345667899999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCCEEEEEccccccCCCC---------------
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVNHFIMVSSLGTNKFGF--------------- 220 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~r~V~vSS~~~~~~~~--------------- 220 (446)
+.+++.++|+|+|+++..... .+....+.+|+.|+.+++++|++. ++++|||+||.++..++.
T Consensus 77 ~~~~~~~~~~v~~~a~~~~~~-~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~~~~~~~~~~~~~~~e~~~~~ 155 (342)
T d1y1pa1 77 YDEVIKGAAGVAHIASVVSFS-NKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVSALIPKPNVEGIYLDEKSWNL 155 (342)
T ss_dssp TTTTTTTCSEEEECCCCCSCC-SCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGGTCCCCTTCCCCEECTTCCCH
T ss_pred hhhhcccchhhhhhccccccc-ccccccccchhhhHHHHHHhhhcccccccccccccceeeccCCCCCCCcccccccccc
Confidence 999999999999999865432 334455678999999999999886 799999999975422211
Q ss_pred ----------chhhhchhhHHHHHHHHHHHHHH----h--CCCCEEEEecCCccCCCcccccc-cc---e---------e
Q 013273 221 ----------PAAILNLFWGVLLWKRKAEEALI----A--SGLPYTIVRPGGMERPTDAYKET-HN---I---------T 271 (446)
Q Consensus 221 ----------~~~~~~~~~~Y~~sK~~~E~~l~----~--~gl~~tivRPg~v~gp~~~~~~~-~~---~---------~ 271 (446)
+..+.++.+.|+.+|..+|.+++ + .+++++++||+.+|||....... .. + .
T Consensus 156 ~~~~~~~~~~e~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~i~p~~v~Gp~~~~~~~~~~~~~~~~~l~~g~~~ 235 (342)
T d1y1pa1 156 ESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLNAVLPNYTIGTIFDPETQSGSTSGWMMSLFNGEVS 235 (342)
T ss_dssp HHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEEEEEESEEECCCSCTTTCCCHHHHHHHHHHTTCCC
T ss_pred ccccccccccccCCCCCcCcccchhHhHHHHHHHhhhhcccccccceecccceeCCCCCccccccchHHHHHHHHcCCcC
Confidence 11235677889999999998764 2 35778899999999985321100 00 0 0
Q ss_pred ecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 272 LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 272 ~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
..........++|++|+|++++.+++++. . ++.|+++++...++.++++++.+.+....
T Consensus 236 ~~~~~~~~~~~v~v~Dva~~~i~~l~~~~-~-~g~~~~~~~~~~t~~eia~~i~k~~p~~~ 294 (342)
T d1y1pa1 236 PALALMPPQYYVSAVDIGLLHLGCLVLPQ-I-ERRRVYGTAGTFDWNTVLATFRKLYPSKT 294 (342)
T ss_dssp HHHHTCCSEEEEEHHHHHHHHHHHHHCTT-C-CSCEEEECCEEECHHHHHHHHHHHCTTSC
T ss_pred cccCCccceeeeeHHHHHHHHHHhhcCcc-c-cceEEEEcCCceEHHHHHHHHHHHcCCCc
Confidence 00011222358999999999999999875 3 44566888888999999999999875443
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.96 E-value=3.4e-28 Score=225.28 Aligned_cols=228 Identities=25% Similarity=0.339 Sum_probs=176.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCe--EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFR--VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~--V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|||||||||||+++++.|+++|++ |+.+.|++++...+ ..+++++.+|+.|.+.
T Consensus 2 ~~~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--------------------~~~~~~~~~d~~~~~~ 61 (252)
T d2q46a1 2 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--------------------GGEADVFIGDITDADS 61 (252)
T ss_dssp SCCEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--------------------TCCTTEEECCTTSHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--------------------cCCcEEEEeeeccccc
Confidence 4679999999999999999999999965 66788988765432 1578999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCC---------------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc
Q 013273 157 IEPALGNASVVICCIGASEK---------------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~---------------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+.++++++|+|||+++.... ..........+|+.++.+++..+.....+++.+.|+........+
T Consensus 62 ~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 141 (252)
T d2q46a1 62 INPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAKVAGVKHIVVVGSMGGTNPDHP 141 (252)
T ss_dssp HHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHHHHTCSEEEEEEETTTTCTTCG
T ss_pred cccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccccccccccccccccccCCCCcc
Confidence 99999999999999985321 112233446678999999999999999999999998776444332
Q ss_pred hhhhchhhHHHHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccccceeeccc---CcccCCccCHHHHHHHHHHHHhC
Q 013273 222 AAILNLFWGVLLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKETHNITLSQE---DTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~---~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.. ......|...+...+.+....|++++++||+++||+..... .+..... .....++||++|||++++.++++
T Consensus 142 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ilRp~~v~g~~~~~~---~~~~~~~~~~~~~~~~~i~~~Dva~a~~~~l~~ 217 (252)
T d2q46a1 142 LN-KLGNGNILVWKRKAEQYLADSGTPYTIIRAGGLLDKEGGVR---ELLVGKDDELLQTDTKTVPRADVAEVCIQALLF 217 (252)
T ss_dssp GG-GGGGCCHHHHHHHHHHHHHHSSSCEEEEEECEEECSCTTSS---CEEEESTTGGGGSSCCEEEHHHHHHHHHHHTTC
T ss_pred cc-cccccchhhhhhhhhhhhhcccccceeecceEEECCCcchh---hhhhccCcccccCCCCeEEHHHHHHHHHHHhCC
Confidence 22 23344678888888888889999999999999999965322 1112111 12234689999999999999998
Q ss_pred CCCCCCcEEEEecCC---CCChhhHHHHHHhccCCC
Q 013273 299 RSLSYCKVVEVIAET---TAPLTPMEELLAKIPSQR 331 (446)
Q Consensus 299 ~~~~~~~v~ni~~~~---~~t~~~i~e~l~~i~~~~ 331 (446)
+. ..+++|||+++. ..+..+|.+++.++.++.
T Consensus 218 ~~-~~g~~~~i~~~~~~~~~~~~~~~~lf~~i~~r~ 252 (252)
T d2q46a1 218 EE-AKNKAFDLGSKPEGTSTPTKDFKALFSQVTSRF 252 (252)
T ss_dssp GG-GTTEEEEEEECCTTTSCCCCCHHHHHTTCCCCC
T ss_pred cc-ccCcEEEEeeCCCCCChhHHHHHHHHHHHHhcC
Confidence 87 678999999754 346789999999888763
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.95 E-value=9e-29 Score=244.68 Aligned_cols=240 Identities=15% Similarity=0.045 Sum_probs=180.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.||+|||||||||||++|+++|+++|++|.+++++......- ...+ ......+++++.+|+.|.+.+.
T Consensus 1 ~~mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~-----~~~~-------~~~~~~~i~~~~~Di~d~~~~~ 68 (346)
T d1oc2a_ 1 QFKNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGN-----KANL-------EAILGDRVELVVGDIADAELVD 68 (346)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCC-----GGGT-------GGGCSSSEEEEECCTTCHHHHH
T ss_pred CcCEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCcccc-----HHHH-------HHhhcCCeEEEEccCCCHHHHH
Confidence 368999999999999999999999998876665532100000 0000 0012268999999999999999
Q ss_pred HHhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----------------
Q 013273 159 PALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----------------- 219 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----------------- 219 (446)
.++.++|.|+|+|+.... ...++...+++|+.|+.++++++...+. ++|++||..++...
T Consensus 69 ~~~~~~~~v~~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~~~-k~i~~ss~~vyg~~~~~~~~~~~~~~~~~~~ 147 (346)
T d1oc2a_ 69 KLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKYDI-RFHHVSTDEVYGDLPLREDLPGHGEGPGEKF 147 (346)
T ss_dssp HHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGGCCBCCGGGSTTTTCSTTSSB
T ss_pred HHHhhhhhhhhhhhcccccchhhCcccceeeehHhHHhhhhhhccccc-cccccccceEecccCccccccccccCccccc
Confidence 999999999999986533 2345666789999999999999999886 89999987664210
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccc-----------cccceeecccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYK-----------ETHNITLSQEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~-----------~~~~~~~~~~~~~~~~~v~ 284 (446)
.+.....|.+.|+.+|..+|.+++ ..|++++++||+.+|||++... ....+.+...+.....++|
T Consensus 148 ~e~~~~~p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~~~~~~~i~~~~~~~~~~i~~~g~~~r~~i~ 227 (346)
T d1oc2a_ 148 TAETNYNPSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIEKFIPRQITNILAGIKPKLYGEGKNVRDWIH 227 (346)
T ss_dssp CTTSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTTSHHHHHHHHHHHTCCCEEETTSCCEEECEE
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCccchhHHHHHHHHcCCceeEeCCCCccccccc
Confidence 112234567789999999998886 4699999999999999964321 1111222233344457899
Q ss_pred HHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 285 NLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++|+|++++.++.++. .++.||++++...+..++.+.+.+..+....
T Consensus 228 v~D~a~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 274 (346)
T d1oc2a_ 228 TNDHSTGVWAILTKGR--MGETYLIGADGEKNNKEVLELILEKMGQPKD 274 (346)
T ss_dssp HHHHHHHHHHHHHHCC--TTCEEEECCSCEEEHHHHHHHHHHHTTCCTT
T ss_pred hhhHHHHHHHHHhhcc--cCccccccccccccchHHHHHHHHHhCCCCc
Confidence 9999999999988775 4789999999999999999999998887654
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=6.7e-28 Score=237.53 Aligned_cols=235 Identities=14% Similarity=0.131 Sum_probs=177.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|||||||||||++|+++|+++| ++|+++++.......+ ...++++++.+|++|.+.+.+
T Consensus 1 MKILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~------------------~~~~~~~~i~~Di~~~~~~~~ 62 (342)
T d2blla1 1 MRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRF------------------LNHPHFHFVEGDISIHSEWIE 62 (342)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGG------------------TTCTTEEEEECCTTTCSHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhh------------------ccCCCeEEEECccCChHHHHH
Confidence 589999999999999999999999 5899999876543321 123789999999998766655
Q ss_pred -HhcCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc------------hhh
Q 013273 160 -ALGNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------------AAI 224 (446)
Q Consensus 160 -a~~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~------------~~~ 224 (446)
++.++|+|||+|+.... ...++...+.+|+.|+.+++++|.+.+. +++++||..++..... ...
T Consensus 63 ~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~-~~~~~ss~~~~~~~~~~~~~~~~~~~~~~~~ 141 (342)
T d2blla1 63 YHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVKYRK-RIIFPSTSEVYGMCSDKYFDEDHSNLIVGPV 141 (342)
T ss_dssp HHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTC-EEEEECCGGGGBTCCCSSBCTTTCCCBCCCT
T ss_pred HHHhCCCccccccccccccccccCCccccccccccccccccccccccc-ccccccccccccccccccccccccccccccc
Confidence 66889999999996542 2233445678999999999999999987 6678888665332111 122
Q ss_pred hchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCccccc-------------------ccceeecccCcccCC
Q 013273 225 LNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKE-------------------THNITLSQEDTLFGG 281 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~-------------------~~~~~~~~~~~~~~~ 281 (446)
..|.+.|+.+|..+|++++. .|++++++|++.+||+...... ...+.+...+.....
T Consensus 142 ~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~ 221 (342)
T d2blla1 142 NKPRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRC 221 (342)
T ss_dssp TCGGGHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEE
T ss_pred CCCcchhhhcccchhhhhhhhhcccCceeEEeeccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeee
Confidence 35677899999999999863 6999999999999998543211 111222233344556
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC-CChhhHHHHHHhccCCCCCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT-APLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~-~t~~~i~e~l~~i~~~~~~~ 334 (446)
++|++|+|++++.+++++. ...+++|||+++.. .++.++++.+.++.+.....
T Consensus 222 ~i~v~D~~~a~~~~~~~~~~~~~g~~~Nig~~~~~~t~~~l~~~i~~~~~~~~~~ 276 (342)
T d2blla1 222 FTDIRDGIEALYRIIENAGNRCDGEIINIGNPENEASIEELGEMLLASFEKHPLR 276 (342)
T ss_dssp CEEHHHHHHHHHHHHHCGGGTTTTEEEEECCTTSEEEHHHHHHHHHHHHHTCTTG
T ss_pred ecccccccceeeeehhhccccCCCeEEEEecccchhHHHHHHHHHHHHhCCCccc
Confidence 8999999999999998753 24588999987654 68999999999998876653
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=6.1e-28 Score=235.38 Aligned_cols=236 Identities=13% Similarity=-0.009 Sum_probs=177.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|+++||+|++++|....... ..++.+ ...++++++.+|+.|...+.+.
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~--~~l~~~-----------~~~~~~~~~~~Dl~d~~~~~~~ 67 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTR--WRLREL-----------GIEGDIQYEDGDMADACSVQRA 67 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCC--HHHHHT-----------TCGGGEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccH--HHHHHh-----------cccCCcEEEEccccChHHhhhh
Confidence 589999999999999999999999999999997542110 111111 1226899999999999999988
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccccCCC-----CchhhhchhhH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGTNKFG-----FPAAILNLFWG 230 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~~~~~-----~~~~~~~~~~~ 230 (446)
+. ..++++|+++.... ...+....+++|+.|+.+++++|++.+.+ +|++.||..++... .++.+..+.+.
T Consensus 68 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~Ss~~~~~~~~~~~~~E~~~~~p~~~ 147 (321)
T d1rpna_ 68 VIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQASTSEMFGLIQAERQDENTPFYPRSP 147 (321)
T ss_dssp HHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEEEEGGGGCSCSSSSBCTTSCCCCCSH
T ss_pred hccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccccchhhcCcccCCCCCCCCCccccCh
Confidence 74 46788888875432 22334555788999999999999998765 67777776553221 23455678889
Q ss_pred HHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCccCHHHHHHH
Q 013273 231 VLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 231 Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
|+.+|..+|++++ ..+++++++||+.+|||...... .........+.....++|++|+|++
T Consensus 148 Y~~sK~~~E~~~~~~~~~~~~~~~~lr~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~ 227 (321)
T d1rpna_ 148 YGVAKLYGHWITVNYRESFGLHASSGILFNHESPLRGIEFVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEA 227 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTSCTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhcCCcEEEEEEecccCCCccccccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHH
Confidence 9999999999986 37899999999999999532110 0111111223334468999999999
Q ss_pred HHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 292 LACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 292 i~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
++.+++++. ++.||++++...++.++.+.+.+.++...
T Consensus 228 ~~~~~~~~~---~~~~ni~~~~~~s~~~~~~~~~~~~~~~~ 265 (321)
T d1rpna_ 228 MWLMLQQDK---ADDYVVATGVTTTVRDMCQIAFEHVGLDY 265 (321)
T ss_dssp HHHHHHSSS---CCCEEECCSCEEEHHHHHHHHHHTTTCCG
T ss_pred HHHHHhcCC---cCCceecccccceehhhhHHHHHHhCCCc
Confidence 999999876 67899999999999999999999988754
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.95 E-value=2e-27 Score=234.24 Aligned_cols=237 Identities=14% Similarity=-0.029 Sum_probs=176.1
Q ss_pred CEE-EEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-----HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 81 NLA-FVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-----AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 81 ~~V-lVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-----~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
|+| ||||||||||++|+++|+++||+|++++|..+. ...+.... ......+++++.+|++|.
T Consensus 1 kKI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~Dl~d~ 68 (347)
T d1t2aa_ 1 RNVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSSSFNTGRIEHLYKNP------------QAHIEGNMKLHYGDLTDS 68 (347)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTGGGC---------------------CEEEEECCTTCH
T ss_pred CCEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHhhch------------hhhccCCcEEEEeecCCc
Confidence 356 999999999999999999999999999996532 11111000 001125799999999999
Q ss_pred hcHHHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCC---CEEEEEccccccCC-----CCch
Q 013273 155 VQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKV---NHFIMVSSLGTNKF-----GFPA 222 (446)
Q Consensus 155 ~~~~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v---~r~V~vSS~~~~~~-----~~~~ 222 (446)
+.+..++. ++++|+|+++.... ...+....+++|+.|+.+++++|+++++ .+|||+||..++.. ..++
T Consensus 69 ~~~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~E~ 148 (347)
T d1t2aa_ 69 TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFYQASTSELYGKVQEIPQKET 148 (347)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEEEEEEGGGTCSCSSSSBCTT
T ss_pred hhhHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEEEecchheecCCCCCCCCCC
Confidence 99999984 56899999886432 2233444578999999999999998865 48999999877431 1345
Q ss_pred hhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCcc
Q 013273 223 AILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQV 283 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~v 283 (446)
++.+|.+.|+.+|..+|+++. ..|++++++||+.+|||+..... .........+....+++
T Consensus 149 ~~~~P~~~Yg~sK~~aE~~~~~~~~~~~~~~~ilr~~~vyGp~~~~~~~~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i 228 (347)
T d1t2aa_ 149 TPFYPRSPYGAAKLYAYWIVVNFREAYNLFAVNGILFNHESPRRGANFVTRKISRSVAKIYLGQLECFSLGNLDAKRDWG 228 (347)
T ss_dssp SCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCSCEEESCTTCEECCE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCCCCCccccccceeeehhhcCCcceeecCCCcceeeee
Confidence 566788899999999999886 36999999999999999543211 11112222333445789
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
|++|++++++.++.+.. .+.|++......+..++.+.+....+...
T Consensus 229 ~v~D~~~a~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (347)
T d1t2aa_ 229 HAKDYVEAMWLMLQNDE---PEDFVIATGEVHSVREFVEKSFLHIGKTI 274 (347)
T ss_dssp EHHHHHHHHHHHHHSSS---CCCEEECCSCCEEHHHHHHHHHHHTTCCE
T ss_pred EecHHHHHHHHHhhcCC---Cccceeccccccccchhhhhhhhhhccee
Confidence 99999999999999875 46788888888888888888888877754
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.95 E-value=2.7e-27 Score=234.03 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=177.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|||||||||||++|+++|+++|++|++++|.... ...... .... ...+++++.+|++|.+.+++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~-~~~~------------~~~~v~~~~~Dl~d~~~l~~ 68 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVL------------TKHHIPFYEVDLCDRKGLEK 68 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHH-HHHH------------HTSCCCEEECCTTCHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHh-HHhh------------cccCCeEEEeecCCHHHHHH
Confidence 579999999999999999999999999999864321 111111 1110 12679999999999999999
Q ss_pred Hhc--CCCEEEEcccCCC--CccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC---------Cchhhhc
Q 013273 160 ALG--NASVVICCIGASE--KEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG---------FPAAILN 226 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~--~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~---------~~~~~~~ 226 (446)
++. ++|+|||+|+... ....++...+.+|+.++.+|+++|++.+++|||++||..++... .++.+..
T Consensus 69 ~~~~~~~d~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~~~i~~~i~~SS~~vyg~~~~~~~~~~~~e~~~~~ 148 (347)
T d1z45a2 69 VFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQYNVSKFVFSSSATVYGDATRFPNMIPIPEECPLG 148 (347)
T ss_dssp HHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEGGGGCCGGGSTTCCSBCTTSCCC
T ss_pred HHhccCCCEEEEccccccccccccCcccccccchhhhHHHHHHHHhcccceEEeecceeeecCcccCCCCCccccccCCC
Confidence 885 7899999998653 22334456678999999999999999999999999998774321 1234456
Q ss_pred hhhHHHHHHHHHHHHHHh------CCCCEEEEecCCccCCCccc--ccc--------------------cceeecccC--
Q 013273 227 LFWGVLLWKRKAEEALIA------SGLPYTIVRPGGMERPTDAY--KET--------------------HNITLSQED-- 276 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~~------~gl~~tivRPg~v~gp~~~~--~~~--------------------~~~~~~~~~-- 276 (446)
|.+.|+.+|..+|++++. .+++++++|++.+||+.... ... ..+.+....
T Consensus 149 p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~ 228 (347)
T d1z45a2 149 PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYD 228 (347)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC-----
T ss_pred CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHHHHhcCCCCeEEeCCCcc
Confidence 778899999999998763 57899999999999874321 000 000010000
Q ss_pred ----cccCCccCHHHHHHHHHHHHhCC-----CCCCCcEEEEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 277 ----TLFGGQVSNLQVAELLACMAKNR-----SLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 277 ----~~~~~~v~~~DvA~ai~~ll~~~-----~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
.....++++.|++.+++.+++.. ....+++||++++...++.++++++.++++.....
T Consensus 229 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ni~~~~~~s~~e~~~~i~~~~~~~~~~ 295 (347)
T d1z45a2 229 SRDGTPIRDYIHVVDLAKGHIAALQYLEAYNENEGLCREWNLGSGKGSTVFEVYHAFCKASGIDLPY 295 (347)
T ss_dssp -CCSSCEECEEEHHHHHHHHHHHHHHHHHSCTTCCEEEEEEESCSCCEEHHHHHHHHHHHHTCCCCC
T ss_pred ccCCceeeeeeeeecccccccccccccccccccccccccceecCCCcccHHHHHHHHHHHHCCCCce
Confidence 11124678888999888877631 12357899999999999999999999999876543
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1.9e-27 Score=222.66 Aligned_cols=204 Identities=19% Similarity=0.220 Sum_probs=156.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++++|||||||||||++|+++|+++| ++|++++|++.+... ....++.+..+|+.+.+
T Consensus 12 m~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~-------------------~~~~~i~~~~~D~~~~~ 72 (232)
T d2bkaa1 12 MQNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDE-------------------EAYKNVNQEVVDFEKLD 72 (232)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCS-------------------GGGGGCEEEECCGGGGG
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcc-------------------cccceeeeeeecccccc
Confidence 456799999999999999999999999 489999998754221 11267899999999999
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHH
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWK 235 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK 235 (446)
.+.+++.++|+||||+|.... ..+...++++|+.++.+++++|++.++++||++||.++... ..+.|+.+|
T Consensus 73 ~~~~~~~~~d~vi~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~a~~~~v~~fi~~Ss~~~~~~--------~~~~Y~~~K 143 (232)
T d2bkaa1 73 DYASAFQGHDVGFCCLGTTRG-KAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGADKS--------SNFLYLQVK 143 (232)
T ss_dssp GGGGGGSSCSEEEECCCCCHH-HHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHH
T ss_pred ccccccccccccccccccccc-ccchhhhhhhcccccceeeecccccCccccccCCccccccC--------ccchhHHHH
Confidence 999999999999999986532 12234457889999999999999999999999999887432 234699999
Q ss_pred HHHHHHHHhCCCC-EEEEecCCccCCCcccccccce---e--ecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 236 RKAEEALIASGLP-YTIVRPGGMERPTDAYKETHNI---T--LSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 236 ~~~E~~l~~~gl~-~tivRPg~v~gp~~~~~~~~~~---~--~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
+.+|+.+++.+++ ++|||||.+||+++.......+ . ...........|+++|+|+++++++.++. .++++.+
T Consensus 144 ~~~E~~l~~~~~~~~~IlRP~~i~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~I~~~dvA~a~i~~~~~~~--~~~~~i~ 221 (232)
T d2bkaa1 144 GEVEAKVEELKFDRYSVFRPGVLLCDRQESRPGEWLVRKFFGSLPDSWASGHSVPVVTVVRAMLNNVVRPR--DKQMELL 221 (232)
T ss_dssp HHHHHHHHTTCCSEEEEEECCEEECTTGGGSHHHHHHHHHHCSCCTTGGGGTEEEHHHHHHHHHHHHTSCC--CSSEEEE
T ss_pred HHhhhccccccccceEEecCceeecCCCcCcHHHHHHHHHhhccCCcccCCCeEEHHHHHHHHHHHHhcCc--cCCeEEE
Confidence 9999999999986 8999999999996543111110 0 00111222346999999999999998875 3555555
Q ss_pred ec
Q 013273 310 IA 311 (446)
Q Consensus 310 ~~ 311 (446)
.+
T Consensus 222 ~~ 223 (232)
T d2bkaa1 222 EN 223 (232)
T ss_dssp EH
T ss_pred cH
Confidence 43
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.94 E-value=1.4e-26 Score=231.99 Aligned_cols=249 Identities=17% Similarity=0.078 Sum_probs=179.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEc---------CchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK-LGFRVRAGVR---------SVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R---------~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
.|+|||||||||||++|+++|++ .|++|+++++ ...........++.. ... .......++.++.+
T Consensus 2 ~MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D~l~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~~ 76 (383)
T d1gy8a_ 2 HMRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQS--DGP---KPPWADRYAALEVG 76 (383)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHS--CSS---CCTTTTCCCEEEES
T ss_pred cCEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEecCCcccccchhhhhhhhHHHHhhhh--ccc---cccccccceEEEEC
Confidence 46899999999999999999996 6899999974 111222222222211 000 01112357899999
Q ss_pred CCCChhcHHHHh---cCCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----
Q 013273 150 DLEKRVQIEPAL---GNASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG----- 219 (446)
Q Consensus 150 Dl~d~~~~~~a~---~~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~----- 219 (446)
|++|.+.+++++ .++|+|||+|+.... ...+....+++|+.++.++++++++.++++++++||..+....
T Consensus 77 Di~d~~~l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 156 (383)
T d1gy8a_ 77 DVRNEDFLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLLHKCDKIIFSSSAAIFGNPTMGSV 156 (383)
T ss_dssp CTTCHHHHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGTBSCCC---
T ss_pred cccCHHHhhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhccCCcccccccccccccccccccc
Confidence 999999999888 468999999986432 2233445578899999999999999999999999987653321
Q ss_pred -------CchhhhchhhHHHHHHHHHHHHHHh----CCCCEEEEecCCccCCCcccccccc-------------------
Q 013273 220 -------FPAAILNLFWGVLLWKRKAEEALIA----SGLPYTIVRPGGMERPTDAYKETHN------------------- 269 (446)
Q Consensus 220 -------~~~~~~~~~~~Y~~sK~~~E~~l~~----~gl~~tivRPg~v~gp~~~~~~~~~------------------- 269 (446)
.++....|.+.|+.+|...|++++. +|++++++|++++|||++.......
T Consensus 157 ~~~~~~~~e~~~~~p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~lR~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~ 236 (383)
T d1gy8a_ 157 STNAEPIDINAKKSPESPYGESKLIAERMIRDCAEAYGIKGICLRYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDI 236 (383)
T ss_dssp --CCCCBCTTSCCBCSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHH
T ss_pred cccccccccccCCCCCCHHHhhHhHHHHHHHHHHHHhCCCEEEEecceeeccCccccccccccccchhHHHHHHHHHhhc
Confidence 1223456788999999999999863 7999999999999999764321100
Q ss_pred -----------------eeecc------cCcccCCccCHHHHHHHHHHHHhCC-------CCCCCcEEEEecCCCCChhh
Q 013273 270 -----------------ITLSQ------EDTLFGGQVSNLQVAELLACMAKNR-------SLSYCKVVEVIAETTAPLTP 319 (446)
Q Consensus 270 -----------------~~~~~------~~~~~~~~v~~~DvA~ai~~ll~~~-------~~~~~~v~ni~~~~~~t~~~ 319 (446)
+.+.. .+.....++|++|+|++++.+++.. ....+++|||+.+...++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~a~~~~~~~~~~~~~~~~~~~~~i~Ni~s~~~~s~~e 316 (383)
T d1gy8a_ 237 APDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAHILALDYVEKLGPNDKSKYFSVFNLGTSRGYSVRE 316 (383)
T ss_dssp SCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHTCCTTTGGGSEEEEEESCSCCEEHHH
T ss_pred cccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHHHHHHHHhhhccccccccccCccEEEeCCCCceeHHH
Confidence 00000 0111235799999999999998641 11346899999999999999
Q ss_pred HHHHHHhccCCCCC
Q 013273 320 MEELLAKIPSQRAE 333 (446)
Q Consensus 320 i~e~l~~i~~~~~~ 333 (446)
+++++.++.+....
T Consensus 317 l~~~i~~~~~~~~~ 330 (383)
T d1gy8a_ 317 VIEVARKTTGHPIP 330 (383)
T ss_dssp HHHHHHHHHCCCCC
T ss_pred HHHHHHHHhCCCCc
Confidence 99999999887654
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=9.4e-27 Score=233.86 Aligned_cols=239 Identities=14% Similarity=0.056 Sum_probs=166.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc----------------hhHHHHHHHHHHhhhcccccccCCCCCCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV----------------QRAENLVQSVKQMKLDGELANKGIQPVEM 143 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~----------------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~ 143 (446)
+|+|||||||||||++|+++|+++||+|++++.-. ............. ...+
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iDnl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~ 68 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKAL------------TGKS 68 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHH------------HCCC
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEecCCcccccccccccccccccchHHHHHHHHhh------------cCCC
Confidence 47999999999999999999999999999987211 0111111111111 1167
Q ss_pred eEEEEcCCCChhcHHHHhc--CCCEEEEcccCCCCc--c---CCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccccc
Q 013273 144 LELVECDLEKRVQIEPALG--NASVVICCIGASEKE--V---FDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSLGT 215 (446)
Q Consensus 144 v~~v~~Dl~d~~~~~~a~~--~~D~VI~~Ag~~~~~--~---~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~~~ 215 (446)
++++.+||+|.+.+++++. ++|+|||+|+..... . ..+...+.+|+.|+.+++++|++.+++ +||+.||..+
T Consensus 69 i~~~~~Dl~d~~~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~i~~ss~~~ 148 (393)
T d1i24a_ 69 IELYVGDICDFEFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHLVKLGTMGE 148 (393)
T ss_dssp CEEEESCTTSHHHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEECCGGG
T ss_pred cEEEEccCCCHHHHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccceeecccccc
Confidence 9999999999999999996 469999999854321 1 122345788999999999999998766 5666666555
Q ss_pred cCCCCc------------------hhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc------
Q 013273 216 NKFGFP------------------AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET------ 267 (446)
Q Consensus 216 ~~~~~~------------------~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~------ 267 (446)
...... ..+..|.+.|+.+|+.+|.+++ +.|++++++||+.+||+.......
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~~l~~~~lR~~~v~G~~~~~~~~~~~~~~ 228 (393)
T d1i24a_ 149 YGTPNIDIEEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVKTDETEMHEELRN 228 (393)
T ss_dssp GCCCSSCBCSSEEEEEETTEEEEEECCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSCCTTGGGSGGGCC
T ss_pred ccccccccccccccccccccccccccccccccHHHHHhhhhcccccccccccceeeeecccccccCCCcccccccccccc
Confidence 321100 0124566789999999999875 579999999999999996532211
Q ss_pred ----------------------cceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEE--ecCCCCChhhHHHH
Q 013273 268 ----------------------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEV--IAETTAPLTPMEEL 323 (446)
Q Consensus 268 ----------------------~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni--~~~~~~t~~~i~e~ 323 (446)
..+.+...+.....++|++|++++++.++++.. ..+. +++ .++...++.+++++
T Consensus 229 ~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~-~~g~-~~~~~~~~~~~si~el~~~ 306 (393)
T d1i24a_ 229 RLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA-KAGE-FRVFNQFTEQFSVNELASL 306 (393)
T ss_dssp CCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC-CTTC-EEEEEECSEEEEHHHHHHH
T ss_pred ccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhc-ccce-eeeecCCCCeeEHHHHHHH
Confidence 011111222333468999999999999999875 3333 333 33445678899999
Q ss_pred HHhccCCCC
Q 013273 324 LAKIPSQRA 332 (446)
Q Consensus 324 l~~i~~~~~ 332 (446)
+.++.+..+
T Consensus 307 i~~~~~~~~ 315 (393)
T d1i24a_ 307 VTKAGSKLG 315 (393)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHhhC
Confidence 998865543
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.94 E-value=1e-26 Score=229.41 Aligned_cols=241 Identities=15% Similarity=0.092 Sum_probs=176.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC------chhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS------VQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~------~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++|||||||||||++|+++|+++|++|++++|. ........+.++.. ...++.++.+|++|.
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~Dl~d~ 70 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQEL------------TGRSVEFEEMDILDQ 70 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHH------------HTCCCEEEECCTTCH
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHHHHh------------cCCCcEEEEeecccc
Confidence 689999999999999999999999999999752 11111111111111 126899999999999
Q ss_pred hcHHHHhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCc------hhh
Q 013273 155 VQIEPALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFP------AAI 224 (446)
Q Consensus 155 ~~~~~a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~------~~~ 224 (446)
+.+.+++.+ .++|+|+|+.... ...++...+++|+.|+.++++++++.++++||++||..++..... ...
T Consensus 71 ~~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~~~v~~~i~~ss~~~~~~~~~~~~~~~~~~ 150 (346)
T d1ek6a_ 71 GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKAHGVKNLVFSSSATVYGNPQYLPLDEAHPT 150 (346)
T ss_dssp HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGGGGCSCSSSSBCTTSCC
T ss_pred ccccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhhcCcccccccccceeeeccccccccccccc
Confidence 999998854 5689999986432 233455668899999999999999999999999999877444321 122
Q ss_pred hchhhHHHHHHHHHHHHHHh-----CCCCEEEEecCCccCCCccccc-------c---------------cceeeccc--
Q 013273 225 LNLFWGVLLWKRKAEEALIA-----SGLPYTIVRPGGMERPTDAYKE-------T---------------HNITLSQE-- 275 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~~-----~gl~~tivRPg~v~gp~~~~~~-------~---------------~~~~~~~~-- 275 (446)
..+.+.|+.+|..+|+.+++ .++.++++|++.+||+...... . ..+.+...
T Consensus 151 ~~~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~ 230 (346)
T d1ek6a_ 151 GGCTNPYGKSKFFIEEMIRDLCQADKTWNAVLLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDY 230 (346)
T ss_dssp CCCSSHHHHHHHHHHHHHHHHHHHCTTCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCS
T ss_pred cccCChHHHHHHHHHHHHHHHHHhccCCceEEEeecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcc
Confidence 45667899999999988763 5899999999999998532100 0 00011010
Q ss_pred ----CcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 276 ----DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 276 ----~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
......++|++|+|.++..++.... ...+++|||+++...++.++++.+.++++....
T Consensus 231 ~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~~~~~i~Ni~~~~~~s~~dl~~~i~~~~~~~~~ 293 (346)
T d1ek6a_ 231 DTEDGTGVRDYIHVVDLAKGHIAALRKLKEQCGCRIYNLGTGTGYSVLQMVQAMEKASGKKIP 293 (346)
T ss_dssp SSSSSSCEECEEEHHHHHHHHHHHHHHHTTTCCEEEEEECCSCCEEHHHHHHHHHHHHCSCCC
T ss_pred cCCCCCeeEeEEEEEeccchhhhhccccccccCceEEEeCCCCcccHHHHHHHHHHHhCCCCC
Confidence 1112358999999999988765422 245789999999999999999999999987544
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=1.8e-26 Score=224.42 Aligned_cols=221 Identities=14% Similarity=0.070 Sum_probs=169.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|+|||||||||||++|+++|+++|+.|+++++..+ .|+.|.+.+.+
T Consensus 2 kkkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~~~~---------------------------------~~~~~~~~~~~ 48 (315)
T d1e6ua_ 2 KQRVFIAGHRGMVGSAIRRQLEQRGDVELVLRTRDE---------------------------------LNLLDSRAVHD 48 (315)
T ss_dssp CEEEEEETTTSHHHHHHHHHHTTCTTEEEECCCTTT---------------------------------CCTTCHHHHHH
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCcCEEEEecCchh---------------------------------ccccCHHHHHH
Confidence 468999999999999999999999999887654321 68999999988
Q ss_pred Hhc--CCCEEEEcccCCCCc---cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC-----chh-----h
Q 013273 160 ALG--NASVVICCIGASEKE---VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF-----PAA-----I 224 (446)
Q Consensus 160 a~~--~~D~VI~~Ag~~~~~---~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~-----~~~-----~ 224 (446)
++. .+|.|||+|+..... ..+....+++|+.|+.+|+++|++++++||||+||..++.... ++. +
T Consensus 49 ~~~~~~~d~v~~~a~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~~a~~~~v~~~i~~SS~~vyg~~~~~~~~E~~~~~~~~ 128 (315)
T d1e6ua_ 49 FFASERIDQVYLAAAKVGGIVANNTYPADFIYQNMMIESNIIHAAHQNDVNKLLFLGSSCIYPKLAKQPMAESELLQGTL 128 (315)
T ss_dssp HHHHHCCSEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEECCGGGSCTTCCSSBCGGGTTSSCC
T ss_pred HHhhcCCCEEEEcchhccccccchhhHHHHHHHHHHHHHHHHHHHHHcCCCEEEEECCceEcCCCCCCCccCCccccCCC
Confidence 874 589999999764322 2223344678999999999999999999999999988854321 111 1
Q ss_pred hchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCcccccc--------------------cceeecccCcccC
Q 013273 225 LNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKET--------------------HNITLSQEDTLFG 280 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~--------------------~~~~~~~~~~~~~ 280 (446)
..+.+.|+.+|..+|++++ +.|++++++||++||||++.+... ..+.....+....
T Consensus 129 ~~~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~ 208 (315)
T d1e6ua_ 129 EPTNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPSNSHVIPALLRRFHEATAQKAPDVVVWGSGTPMR 208 (315)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTTCSSHHHHHHHHHHHHHHHTCSEEEEESCSCCEE
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCccccccceeeeccchhhhhccCCceEEcCCCceEE
Confidence 2344679999999999886 469999999999999997643211 1111112223345
Q ss_pred CccCHHHHHHHHHHHHhCCC-------CCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-------LSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-------~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.++|++|+++++..++.+.. ......+|++.+...++.++.+++.++++....
T Consensus 209 ~~~~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~ 268 (315)
T d1e6ua_ 209 EFLHVDDMAAASIHVMELAHEVWLENTQPMLSHINVGTGVDCTIRELAQTIAKVVGYKGR 268 (315)
T ss_dssp CEEEHHHHHHHHHHHHHSCHHHHHHTSBTTBCCEEESCSCCEEHHHHHHHHHHHHTCCSE
T ss_pred EEEEeehhHHHHHHhhhhccccccccccccccccccCCCcchHHHHHHHHHHHHhCCCcc
Confidence 78999999999999997642 234678999999888999999999999987754
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.94 E-value=1.2e-26 Score=227.71 Aligned_cols=239 Identities=13% Similarity=-0.010 Sum_probs=174.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-----hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-----RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-----~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
+|+|||||||||||++|++.|+++||+|++++|..+ +...+..... ......+.++.+|+++.
T Consensus 1 ~k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~Di~~~ 68 (339)
T d1n7ha_ 1 RKIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPH------------NVNKALMKLHYADLTDA 68 (339)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------------------CCEEEEECCTTCH
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhh------------hccccceEEEEccccCH
Confidence 478999999999999999999999999999999543 2111111100 01236789999999999
Q ss_pred hcHHHHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhC-----CCCEEEEEccccccCCC----Cc
Q 013273 155 VQIEPALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIA-----KVNHFIMVSSLGTNKFG----FP 221 (446)
Q Consensus 155 ~~~~~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~-----~v~r~V~vSS~~~~~~~----~~ 221 (446)
+.+.+.+. ++|+|||+|+.... ...++...+.+|+.++.++++++++. ...++++.||..+.... .+
T Consensus 69 ~~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~~~~~~~~~~E 148 (339)
T d1n7ha_ 69 SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVKYYQAGSSEMFGSTPPPQSE 148 (339)
T ss_dssp HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGGTTSCSSBCT
T ss_pred HHHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhcccccccceeeeecccceecccCCCCCCC
Confidence 99999884 67999999986432 22345566788999999999998753 34477777776553221 34
Q ss_pred hhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc---------------ccceeecccCcccCCc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE---------------THNITLSQEDTLFGGQ 282 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~---------------~~~~~~~~~~~~~~~~ 282 (446)
+.+..|.+.|+.+|..+|.++. .+|++++++||+++|||...... ...............+
T Consensus 149 ~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~~~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~ 228 (339)
T d1n7ha_ 149 TTPFHPRSPYAASKCAAHWYTVNYREAYGLFACNGILFNHESPRRGENFVTRKITRALGRIKVGLQTKLFLGNLQASRDW 228 (339)
T ss_dssp TSCCCCCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCTTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEEC
T ss_pred CCCCCCcchhhHHHHHHHHHHHHHHHHhCCCEEEEEEccccCCCCCCCCCcchhhHHHHHHhcCCCCeEEeCCCCccccc
Confidence 5567788899999999998875 47999999999999999643211 0011111122333468
Q ss_pred cCHHHHHHHHHHHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCCCCC
Q 013273 283 VSNLQVAELLACMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
+|++|+|++++.+++++. ...+++..+...+..++.+++.++.+....
T Consensus 229 ~~v~D~a~~~~~~~~~~~---~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~ 276 (339)
T d1n7ha_ 229 GFAGDYVEAMWLMLQQEK---PDDYVVATEEGHTVEEFLDVSFGYLGLNWK 276 (339)
T ss_dssp EEHHHHHHHHHHHHTSSS---CCEEEECCSCEEEHHHHHHHHHHHTTCCGG
T ss_pred eeeehHHHHHHHHHhcCC---CCccccccccccccchhhhhhhhhhhcccC
Confidence 999999999999999876 456677777778889999999999887643
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.93 E-value=3.4e-26 Score=220.43 Aligned_cols=234 Identities=17% Similarity=0.146 Sum_probs=175.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH-HHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL-VQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l-~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++++|||||||||||++|+++|+++||+|++++|+....... .+.+... ...+++++.+|+.|.+.+
T Consensus 2 ~k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~------------~~~~v~~v~~d~~d~~~~ 69 (312)
T d1qyda_ 2 KKSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYF------------KQLGAKLIEASLDDHQRL 69 (312)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHH------------HTTTCEEECCCSSCHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhh------------ccCCcEEEEeecccchhh
Confidence 356799999999999999999999999999999976432111 1111111 115799999999999999
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
.+++.+++++||+++... ...|..+..+++++|++.+..++|+.||.+.+.. .+.....+...|...|..
T Consensus 70 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~l~~a~~~~~~~~v~~Ss~g~~~~-~~~~~~~~~~~~~~~~~~ 139 (312)
T d1qyda_ 70 VDALKQVDVVISALAGGV---------LSHHILEQLKLVEAIKEAGNIKRFLPSEFGMDPD-IMEHALQPGSITFIDKRK 139 (312)
T ss_dssp HHHHTTCSEEEECCCCSS---------SSTTTTTHHHHHHHHHHSCCCSEEECSCCSSCTT-SCCCCCSSTTHHHHHHHH
T ss_pred hhhccCcchhhhhhhhcc---------cccchhhhhHHHHHHHHhcCCcEEEEeeccccCC-CcccccchhhhhhHHHHH
Confidence 999999999999987532 2346667889999999998788888998876432 222334566678999999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCcccc---------cccceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcE-E
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAYK---------ETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKV-V 307 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~~---------~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v-~ 307 (446)
++++.++.+++++++||+.+||+..... ....+.+...+.....+||++|+|++++.++.++. ..++. |
T Consensus 140 ~~~~~~~~~~~~~i~r~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~-~~~~~~~ 218 (312)
T d1qyda_ 140 VRRAIEAASIPYTYVSSNMFAGYFAGSLAQLDGHMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQ-TLNKTMY 218 (312)
T ss_dssp HHHHHHHTTCCBCEEECCEEHHHHTTTSSCTTCCSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGG-GSSSEEE
T ss_pred HHHhhcccccceEEeccceeecCCccchhhHHHHhhhcccccccccccccccceeeHHHHHHHHHHHhcCcc-ccCceEE
Confidence 9999999999999999999998643221 11112222223334468999999999999999876 44554 5
Q ss_pred EEecCCCCChhhHHHHHHhccCCCCCCC
Q 013273 308 EVIAETTAPLTPMEELLAKIPSQRAEPK 335 (446)
Q Consensus 308 ni~~~~~~t~~~i~e~l~~i~~~~~~~~ 335 (446)
+++++...|+.++.+.++++.|......
T Consensus 219 ~~~~~~~~s~~e~~~~~~~~~g~~~~~~ 246 (312)
T d1qyda_ 219 IRPPMNILSQKEVIQIWERLSEQNLDKI 246 (312)
T ss_dssp CCCGGGEEEHHHHHHHHHHHHTCCCEEC
T ss_pred EeCCCcCCCHHHHHHHHHHHHCCCCeEE
Confidence 6666667899999999999998876543
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.93 E-value=8.4e-26 Score=220.60 Aligned_cols=237 Identities=15% Similarity=0.116 Sum_probs=174.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|||||||||||++|+++|+++|++|++++|-. .....+ ..+. ..++++++.+|++|.+.+.+
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~-~~~~--------------~~~~~~~i~~Di~~~~~l~~ 66 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNL-HWLS--------------SLGNFEFVHGDIRNKNDVTR 66 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHH-HHHH--------------TTCCCEEEECCTTCHHHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHH-HHhh--------------ccCCcEEEEcccCCHHHHHH
Confidence 699999999999999999999999999987522 222211 1111 12789999999999999999
Q ss_pred HhcC--CCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCC---------------
Q 013273 160 ALGN--ASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGF--------------- 220 (446)
Q Consensus 160 a~~~--~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~--------------- 220 (446)
++.+ +|+|||+|+.... ...++...+++|+.|+.+|+++|.+.+++++|++||.++.....
T Consensus 67 ~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~i~~sS~~~~~~~~~~~~~~~~~~~~~~~ 146 (338)
T d1orra_ 67 LITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQYNSNCNIIYSSTNKVYGDLEQYKYNETETRYTCV 146 (338)
T ss_dssp HHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEEEGGGGTTCTTSCEEECSSCEEET
T ss_pred HHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccccccccc
Confidence 9965 5999999986543 22345667889999999999999999998888888755422111
Q ss_pred -------chhhhchhhHHHHHHHHHHHHHH----hCCCCEEEEecCCccCCCccccc-------------------ccce
Q 013273 221 -------PAAILNLFWGVLLWKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKE-------------------THNI 270 (446)
Q Consensus 221 -------~~~~~~~~~~Y~~sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~-------------------~~~~ 270 (446)
......+.+.|+.+|...|.++. ..++...++|+..+|++...... ...+
T Consensus 147 ~~~~~~~~~~~~~~~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (338)
T d1orra_ 147 DKPNGYDESTQLDFHSPYGCSKGAADQYMLDYARIFGLNTVVFRHSSMYGGRQFATYDQGWVGWFCQKAVEIKNGINKPF 226 (338)
T ss_dssp TCTTCBCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTCCCBTTBCHHHHHHHHHHHHHTTCCCCE
T ss_pred ccccCcccCCccccccccccccchhhhhhhhhhhccCcccccccccceeeccccccccccccchhhHHHHHHHhccCCce
Confidence 01224567789999999998765 47999999999999876432110 1112
Q ss_pred eecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecC--CCCChhhHHHHHHhccCCCCC
Q 013273 271 TLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAE--TTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 271 ~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~--~~~t~~~i~e~l~~i~~~~~~ 333 (446)
.+...+.....++|++|++++++.++++.....+++||+..+ ...++.++.+.+.++.+....
T Consensus 227 ~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~~~~~ 291 (338)
T d1orra_ 227 TISGNGKQVRDVLHAEDMISLYFTALANVSKIRGNAFNIGGTIVNSLSLLELFKLLEDYCNIDMR 291 (338)
T ss_dssp EEESSSCCEEECEEHHHHHHHHHHHHHTHHHHTTCEEEESSCGGGEEEHHHHHHHHHHHHTCCCC
T ss_pred EEeCCCceeEeeecccchhhHHHHHHhccccccCccccccccccccccHHHHHHHHHHHHCCCce
Confidence 222233344568999999999999998755456889999554 345778899999998887654
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=7.4e-26 Score=208.26 Aligned_cols=187 Identities=22% Similarity=0.261 Sum_probs=137.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.|+|||||||||||++|+++|+++|+ +|++++|++.. ..+++. .++.|..++
T Consensus 2 ~KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~-----------------------~~~~~~---~~~~d~~~~ 55 (212)
T d2a35a1 2 PKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-----------------------EHPRLD---NPVGPLAEL 55 (212)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-----------------------CCTTEE---CCBSCHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh-----------------------hccccc---ccccchhhh
Confidence 47999999999999999999999997 67777776532 113343 344444444
Q ss_pred HHH-hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHH
Q 013273 158 EPA-LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 236 (446)
Q Consensus 158 ~~a-~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (446)
.+. ...+|+||||+|.......+.....++|+.++.+++++|++.++++||++||.++... ....|+.+|+
T Consensus 56 ~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~v~~~i~~Ss~~~~~~--------~~~~y~~~K~ 127 (212)
T d2a35a1 56 LPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALEMGARHYLVVSALGADAK--------SSIFYNRVKG 127 (212)
T ss_dssp GGGCCSCCSEEEECCCCCHHHHSSHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTCCTT--------CSSHHHHHHH
T ss_pred hhccccchheeeeeeeeeccccccccccccchhhhhhhcccccccccccccccccccccccc--------cccchhHHHH
Confidence 433 3568999999987644334445567889999999999999999999999999887432 2346999999
Q ss_pred HHHHHHHhCCCC-EEEEecCCccCCCcccccccceeecccCccc--CCccCHHHHHHHHHHHHhCCC
Q 013273 237 KAEEALIASGLP-YTIVRPGGMERPTDAYKETHNITLSQEDTLF--GGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 237 ~~E~~l~~~gl~-~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~--~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.+|+++++.+++ ++|+||+.|||+.+.+.....+.......+. ..+||++|||++++.+++++.
T Consensus 128 ~~E~~l~~~~~~~~~I~Rp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~v~DvA~ai~~~~~~~~ 194 (212)
T d2a35a1 128 ELEQALQEQGWPQLTIARPSLLFGPREEFRLAEILAAPIARILPGKYHGIEACDLARALWRLALEEG 194 (212)
T ss_dssp HHHHHHTTSCCSEEEEEECCSEESTTSCEEGGGGTTCCCC----CHHHHHHHHHHHHHHHHHHTCCC
T ss_pred HHhhhccccccccceeeCCcceeCCcccccHHHHHHHHHhhccCCCCcEEEHHHHHHHHHHHHcCCC
Confidence 999999998875 9999999999997543211111111111111 135999999999999998876
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.92 E-value=8e-26 Score=215.46 Aligned_cols=214 Identities=14% Similarity=0.128 Sum_probs=170.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|+++|.++||+|++++|+. +|+.|.+.++++
T Consensus 2 MKIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~----------------------------------~D~~d~~~~~~~ 47 (281)
T d1vl0a_ 2 MKILITGANGQLGREIQKQLKGKNVEVIPTDVQD----------------------------------LDITNVLAVNKF 47 (281)
T ss_dssp EEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT----------------------------------CCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEeechh----------------------------------ccCCCHHHHHHH
Confidence 6799999999999999999999999999998853 689999999999
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
+. ++|+|||+|+.... ....+......|+....++.+.++..+. ++++.||..+.... .+.+...+...|
T Consensus 48 l~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~ss~~v~~~~~~~~~~e~~~~~~~~~~ 126 (281)
T d1vl0a_ 48 FNEKKPNVVINCAAHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSVGA-EIVQISTDYVFDGEAKEPITEFDEVNPQSAY 126 (281)
T ss_dssp HHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHTC-EEEEEEEGGGSCSCCSSCBCTTSCCCCCSHH
T ss_pred HHHcCCCEEEeeccccccccccccchhhcccccccccccccccccccc-cccccccceeeeccccccccccccccchhhh
Confidence 86 57999999986532 2223344466788888888888877665 78788886653322 334456777889
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCCCcccccc--------cceeecccCcccCCccCHHHHHHHHHHHHhCCCCCC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERPTDAYKET--------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSY 303 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~--------~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~ 303 (446)
+.+|...|+++++.+.+++++||+++||+++++... ....+. ......++|++|+++++..++++..
T Consensus 127 ~~~k~~~e~~~~~~~~~~~i~R~~~vyG~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~v~D~~~~~~~~~~~~~--- 201 (281)
T d1vl0a_ 127 GKTKLEGENFVKALNPKYYIVRTAWLYGDGNNFVKTMINLGKTHDELKVV--HDQVGTPTSTVDLARVVLKVIDEKN--- 201 (281)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECSEESSSSCHHHHHHHHHHHCSEEEEE--SSCEECCEEHHHHHHHHHHHHHHTC---
T ss_pred hhhhhHHHHHHHHhCCCccccceeEEeCCCcccccchhhhhccCCceeec--CCceeccchhhhhhhhhhhhhhhcc---
Confidence 999999999999999999999999999998664211 111111 2345578999999999999999876
Q ss_pred CcEEEEecCCCCChhhHHHHHHhccCCCCCC
Q 013273 304 CKVVEVIAETTAPLTPMEELLAKIPSQRAEP 334 (446)
Q Consensus 304 ~~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~ 334 (446)
.++||++++...++.++++.+.+.+|.....
T Consensus 202 ~g~~~~~~~~~~s~~e~~~~i~~~~g~~~~i 232 (281)
T d1vl0a_ 202 YGTFHCTCKGICSWYDFAVEIFRLTGIDVKV 232 (281)
T ss_dssp CEEEECCCBSCEEHHHHHHHHHHHHCCCCEE
T ss_pred cCceeEeCCCccchHHHHHHHHHHhCCCceE
Confidence 5699999999999999999999999987653
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.92 E-value=7.4e-26 Score=216.44 Aligned_cols=228 Identities=17% Similarity=0.175 Sum_probs=170.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH--HHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV--QSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~--~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++|||||||||||++|+++|+++||+|++++|+........ ..+... ...+++++.+|+.+...
T Consensus 2 ~kkKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~------------~~~~~~~~~~d~~~~~~ 69 (307)
T d1qyca_ 2 SRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESF------------KASGANIVHGSIDDHAS 69 (307)
T ss_dssp CCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHH------------HTTTCEEECCCTTCHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhh------------ccCCcEEEEeecccchh
Confidence 3578999999999999999999999999999999765432211 111211 01568999999999999
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKR 236 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~ 236 (446)
+.+.+.+++.|||+++.. +..+..+++++++.++++++++.|+.+... ...........+...+.
T Consensus 70 ~~~~~~~~~~vi~~~~~~-------------~~~~~~~~~~a~~~~~~~~~~~~s~~~~~~--~~~~~~~~~~~~~~~~~ 134 (307)
T d1qyca_ 70 LVEAVKNVDVVISTVGSL-------------QIESQVNIIKAIKEVGTVKRFFPSEFGNDV--DNVHAVEPAKSVFEVKA 134 (307)
T ss_dssp HHHHHHTCSEEEECCCGG-------------GSGGGHHHHHHHHHHCCCSEEECSCCSSCT--TSCCCCTTHHHHHHHHH
T ss_pred hhhhhhhceeeeeccccc-------------ccchhhHHHHHHHHhccccceeeecccccc--ccccccccccccccccc
Confidence 999999999999998642 344567888999998888999988876522 22222344456778888
Q ss_pred HHHHHHHhCCCCEEEEecCCccCCCcccccc--------cceeecccCcccCCccCHHHHHHHHHHHHhCCCCCCCcEEE
Q 013273 237 KAEEALIASGLPYTIVRPGGMERPTDAYKET--------HNITLSQEDTLFGGQVSNLQVAELLACMAKNRSLSYCKVVE 308 (446)
Q Consensus 237 ~~E~~l~~~gl~~tivRPg~v~gp~~~~~~~--------~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~n 308 (446)
..+..+++.|++++++||+++||+....... ....+.........+||++|+|+++++++.++....+.+|+
T Consensus 135 ~~~~~~~~~~~~~~i~r~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~~~~~~~~~ 214 (307)
T d1qyca_ 135 KVRRAIEAEGIPYTYVSSNCFAGYFLRSLAQAGLTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRTLNKTLYL 214 (307)
T ss_dssp HHHHHHHHHTCCBEEEECCEEHHHHTTTTTCTTCSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGGTTEEEEC
T ss_pred cccchhhccCCCceecccceecCCCccchhhhhhhhhhcccceeeecccccccCCcHHHHHHHHHHHhcChhhcCceeEE
Confidence 9999999999999999999999875432111 11122222333446899999999999999887633334566
Q ss_pred EecCCCCChhhHHHHHHhccCCCCC
Q 013273 309 VIAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 309 i~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
++++...|+.++++++.+++|....
T Consensus 215 ~~~~~~~s~~ei~~~~~~~~G~~~~ 239 (307)
T d1qyca_ 215 RLPANTLSLNELVALWEKKIDKTLE 239 (307)
T ss_dssp CCGGGEEEHHHHHHHHHHHTTSCCE
T ss_pred eCCCCccCHHHHHHHHHHHHCCCCc
Confidence 6777888999999999999998754
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.92 E-value=9.4e-25 Score=206.86 Aligned_cols=218 Identities=14% Similarity=0.102 Sum_probs=164.9
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.++|++|||||+++||+++++.|+++|++|++.+|+.++++.+.++++.. + .++.++.+|++|.+
T Consensus 6 f~lenKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~---------g----~~~~~~~~Dvt~~~ 72 (251)
T d2c07a1 6 YCGENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSF---------G----YESSGYAGDVSKKE 72 (251)
T ss_dssp CCCSSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTT---------T----CCEEEEECCTTCHH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHH
Confidence 3577899999999999999999999999999999999999988888777643 2 57899999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
++++++ +++|++|||||.... +..++...+++|+.++..+++++. +.+.++||++||......
T Consensus 73 ~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~ 152 (251)
T d2c07a1 73 EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVGLTG 152 (251)
T ss_dssp HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHC
T ss_pred HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHhcCC
Confidence 888776 578999999996432 234566678899999998888764 456679999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
. .....|+.+|+.++.+.+ .+|++++.|.||++.++...................+.+..++|||++
T Consensus 153 ~------~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~ 226 (251)
T d2c07a1 153 N------VGQANYSSSKAGVIGFTKSLAKELASRNITVNAIAPGFISSDMTDKISEQIKKNIISNIPAGRMGTPEEVANL 226 (251)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCC-----CCHHHHHHHHTTCTTSSCBCHHHHHHH
T ss_pred C------CCCHHHHHHHHHHHHHHHHHHHHhhhhCeEEEEEccCCEecccccccCHHHHHHHHhcCCCCCCcCHHHHHHH
Confidence 1 234579999999998876 379999999999998874221110001111122334567899999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++|+.+.. ...|+++.|-++
T Consensus 227 v~fL~S~~s~~itG~~i~vDGG 248 (251)
T d2c07a1 227 ACFLSSDKSGYINGRVFVIDGG 248 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHhCchhCCCcCcEEEECCC
Confidence 999997543 346888888766
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.92 E-value=3.6e-24 Score=201.90 Aligned_cols=210 Identities=18% Similarity=0.187 Sum_probs=163.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|++++.+.+.+++. .++.++.+|++|.+++
T Consensus 4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~v 67 (244)
T d1nffa_ 4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----------------DAARYVHLDVTQPAQW 67 (244)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----------------GGEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhh----------------CcceEEEeecCCHHHH
Confidence 678999999999999999999999999999999999988777655432 5688999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +..+|+..+++|+.++.++++++. +.+-++||++||.......
T Consensus 68 ~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~- 146 (244)
T d1nffa_ 68 KAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGLAGT- 146 (244)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEecccccccccc-
Confidence 8776 578999999996432 334466678999999999988763 3455799999998764332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++........ ......+.+..++|+|++++
T Consensus 147 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~-----~~~~pl~R~~~p~diA~~v~ 216 (244)
T d1nffa_ 147 -----VACHGYTATKFAVRGLTKSTALELGPSGIRVNSIHPGLVKTPMTDWVPED-----IFQTALGRAAEPVEVSNLVV 216 (244)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSGGGTTSCTT-----CSCCSSSSCBCHHHHHHHHH
T ss_pred -----ccccchhhHHHHHHHHHHHHHHHhcccCEEEEEEeeCCccChhHhhhhHH-----HHhccccCCCCHHHHHHHHH
Confidence 234579999999998876 3799999999999988743221111 11233456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+.+.. ...|+++.|-++..
T Consensus 217 fL~s~~s~~itG~~i~vDGG~~ 238 (244)
T d1nffa_ 217 YLASDESSYSTGAEFVVDGGTV 238 (244)
T ss_dssp HHHSGGGTTCCSCEEEESTTGG
T ss_pred HHhChhhCCCcCCEEEECCCee
Confidence 9997543 35788998877643
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=1.2e-24 Score=205.19 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=162.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|+++||||+++||+++++.|+++|++|++.+|++++++++.+++. .+..++.+|++|.+++
T Consensus 2 l~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~----------------~~~~~~~~Dv~~~~~v 65 (243)
T d1q7ba_ 2 FEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLG----------------ANGKGLMLNVTDPASI 65 (243)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhC----------------CCCcEEEEEecCHHHh
Confidence 468899999999999999999999999999999999988887766542 4678899999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +..+++..+++|+.++..+++++. +.+-++||++||.......
T Consensus 66 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~- 144 (243)
T d1q7ba_ 66 ESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGN- 144 (243)
T ss_dssp HHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCC-
T ss_pred hhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhhcCCC-
Confidence 8776 578999999986432 334466678999999999988884 4466799999997663321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
.....|..+|..++.+.+ .+|++++.|.||++.++...................+.+..++|||++++
T Consensus 145 -----~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v~ 219 (243)
T d1q7ba_ 145 -----GGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVA 219 (243)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHTSCHHHHHHHHTTCTTSSCBCHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHHHHHHHHHhCccCeEEEEEecceEechhhhhhhhhHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 234579999999998876 37999999999999876311100000000111233456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+.+.. ...|++++|-++-
T Consensus 220 fL~S~~s~~itGq~i~vdGG~ 240 (243)
T d1q7ba_ 220 FLASDEAAYITGETLHVNGGM 240 (243)
T ss_dssp HHHSGGGTTCCSCEEEESTTS
T ss_pred HHhCchhcCCcCCeEEECCCe
Confidence 9997543 3578899887764
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3.7e-24 Score=203.15 Aligned_cols=218 Identities=12% Similarity=0.131 Sum_probs=166.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++++. | .++.++.+|++|.++
T Consensus 8 ~L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~---------g----~~~~~~~~Dvs~~~~ 74 (255)
T d1fmca_ 8 RLDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQL---------G----GQAFACRCDITSEQE 74 (255)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHc---------C----CcEEEEEccCCCHHH
Confidence 467899999999999999999999999999999999999998888877754 2 578999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-----ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK-----EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-----~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++.+++. +.+.+++|++||.......
T Consensus 75 ~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Ii~isS~~~~~~~- 153 (255)
T d1fmca_ 75 LSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKNGGGVILTITSMAAENKN- 153 (255)
T ss_dssp HHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTCCC-
T ss_pred HHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhhccccccccccccccchhccc-
Confidence 87765 679999999996533 233456668899999999888774 3455689999997764332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|..++.+.+ .+|++++.|.||++.++...... .............+.+..++|||+++
T Consensus 154 -----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~e~~~~~~~~~pl~R~g~pedvA~~v 228 (255)
T d1fmca_ 154 -----INMTSYASSKAAASHLVRNMAFDLGEKNIRVNGIAPGAILTDALKSVITPEIEQKMLQHTPIRRLGQPQDIANAA 228 (255)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCCHHHHHHHHHTCSSCSCBCHHHHHHHH
T ss_pred -----cccccchhHHHHHHHHHHHHHHHhCccCeEEEEeeeCcCcChHhhccCCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 234579999999998765 37999999999999876311100 00000011123345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++|+.+.. ...|+++.|-++.
T Consensus 229 ~fL~S~~s~~itG~~i~vDGG~ 250 (255)
T d1fmca_ 229 LFLCSPAASWVSGQILTVSGGG 250 (255)
T ss_dssp HHHHSGGGTTCCSCEEEESTTS
T ss_pred HHHhCchhcCCcCCEEEECcCc
Confidence 99997543 3578899888775
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=99.91 E-value=7e-24 Score=200.80 Aligned_cols=219 Identities=13% Similarity=0.154 Sum_probs=164.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++..++.+++.+. .| .++.++.+|++|.+++
T Consensus 3 l~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~--------~g----~~~~~~~~Dv~~~~~v 70 (251)
T d1vl8a_ 3 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEK--------YG----VETMAFRCDVSNYEEV 70 (251)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HC----CCEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--------hC----CcEEEEEccCCCHHHH
Confidence 57899999999999999999999999999999999998888777665432 12 5788999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +.++|+..+++|+.++.++.+++. +.+-+++|++||......+.
T Consensus 71 ~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~~~~~~ 150 (251)
T d1vl8a_ 71 KKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTVEEVTM 150 (251)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGGTCCCS
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchhccccC
Confidence 8776 579999999996432 334456678899999999988875 34667999999965533221
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc--cceeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET--HNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~--~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|..++.+.+ .+|++++.|.||++.++....... ............+.+..++|||++
T Consensus 151 -----~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~ 225 (251)
T d1vl8a_ 151 -----PNISAYAASKGGVASLTKALAKEWGRYGIRVNVIAPGWYRTKMTEAVFSDPEKLDYMLKRIPLGRTGVPEDLKGV 225 (251)
T ss_dssp -----SSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSTTTHHHHTCHHHHHHHHHTCTTSSCBCGGGGHHH
T ss_pred -----ccccchHHHHHhHHHHHHHHHHHhcccCeEEEEEeeCcccCHHHHhccCCHHHHHHHHhcCCCCCCCCHHHHHHH
Confidence 224579999999998876 379999999999998874321100 000011112334567889999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecCC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++|+.+.. ...|+++.|-++-
T Consensus 226 v~fL~S~~a~~itG~~i~vDGG~ 248 (251)
T d1vl8a_ 226 AVFLASEEAKYVTGQIIFVDGGW 248 (251)
T ss_dssp HHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhCchhCCCcCcEEEeCcCe
Confidence 999997643 3468899887663
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=99.91 E-value=6e-24 Score=201.27 Aligned_cols=215 Identities=14% Similarity=0.085 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++.+.+.+++.. ..++.++.+|++|.+++
T Consensus 4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~--------------~~~~~~~~~Dv~~~~~v 69 (251)
T d1zk4a1 4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGT--------------PDQIQFFQHDSSDEDGW 69 (251)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCC--------------CCcEEEEEccCCCHHHH
Confidence 6789999999999999999999999999999999999887776655421 25799999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCC-EEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVN-HFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~-r~V~vSS~~~~~~~ 219 (446)
++++ +++|++|||||.... +..+|...+++|+.++.++.+++. +.+.+ ++|++||.......
T Consensus 70 ~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~m~~~~~gg~Ii~isS~~~~~~~ 149 (251)
T d1zk4a1 70 TKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQRMKNKGLGASIINMSSIEGFVGD 149 (251)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHHHHhcCCCCceEeeeccceeccC
Confidence 7765 678999999996432 333455678999999999988875 33433 89999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccc-cccceeecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYK-ETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~-~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
.....|+.+|..++.+.+ .+|++++.|.||++.++..... ..............+.+..++|||
T Consensus 150 ------~~~~~Y~asKaal~~lt~~lA~e~~l~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA 223 (251)
T d1zk4a1 150 ------PSLGAYNASKGAVRIMSKSAALDCALKDYDVRVNTVHPGYIKTPLVDDLPGAEEAMSQRTKTPMGHIGEPNDIA 223 (251)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEEEECCBCCHHHHTSTTHHHHHTSTTTCTTSSCBCHHHHH
T ss_pred ------CCchhHHHHHHHHhcchHHHHHHHhcCCCcEEEEEEeCCCCCChhHHhcCCHHHHHHHHhCCCCCCCcCHHHHH
Confidence 234579999998876543 3689999999999987631111 011111111223345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++|+.+.. ...|+++.|-++
T Consensus 224 ~~v~fL~S~~s~~itG~~i~vDGG 247 (251)
T d1zk4a1 224 YICVYLASNESKFATGSEFVVDGG 247 (251)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHhCchhCCCcCcEEEECcc
Confidence 99999997543 346888988766
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.91 E-value=1.5e-23 Score=197.43 Aligned_cols=212 Identities=16% Similarity=0.076 Sum_probs=158.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++.+++.+. -+++++.+|++|.+++
T Consensus 3 L~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~------------------~~~~~~~~Dv~~~~~v 64 (242)
T d1ulsa_ 3 LKDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEA------------------VGAHPVVMDVADPASV 64 (242)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT------------------TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH------------------cCCeEEEEecCCHHHH
Confidence 5789999999999999999999999999999999998877665431 3577899999999998
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +..+|+..+++|+.++.++.+++.+ .+..+++++||.+...
T Consensus 65 ~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~~~i~~~ss~~~~~--- 141 (242)
T d1ulsa_ 65 ERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMREKNPGSIVLTASRVYLG--- 141 (242)
T ss_dssp HHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCEEEEEECCGGGGC---
T ss_pred HHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccccccccceeeeeccccccC---
Confidence 8776 578999999996432 3344667789999999999988854 3555777777754322
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
......|+.+|...+.+.+ .+|++++.|.||++.++...................+.+..++|+|++++
T Consensus 142 ----~~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedia~~v~ 217 (242)
T d1ulsa_ 142 ----NLGQANYAASMAGVVGLTRTLALELGRWGIRVNTLAPGFIETRMTAKVPEKVREKAIAATPLGRAGKPLEVAYAAL 217 (242)
T ss_dssp ----CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTTSSSCHHHHHHHHHTCTTCSCBCHHHHHHHHH
T ss_pred ----CCCCcchHHHHHHHHHHHHHHHHHHhhhCcEEEEEeeCcccChhhhcCCHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 1234579999999998766 37999999999999877422111000001111233456789999999999
Q ss_pred HHHhCCC-CCCCcEEEEecCCC
Q 013273 294 CMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 294 ~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+|+.+.. ...|+++.|-++..
T Consensus 218 fL~S~~s~~itG~~i~vDGG~t 239 (242)
T d1ulsa_ 218 FLLSDESSFITGQVLFVDGGRT 239 (242)
T ss_dssp HHHSGGGTTCCSCEEEESTTTT
T ss_pred HHhchhhCCCCCcEEEECCCcc
Confidence 9997543 35788998877753
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=99.91 E-value=1e-23 Score=199.99 Aligned_cols=216 Identities=13% Similarity=0.050 Sum_probs=160.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||++++++|+++|++|++.+|+.++...+.+++ + .++.++.+|++|.+++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~------------~----~~~~~~~~Dv~~~~~v 66 (254)
T d1hdca_ 3 LSGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATAREL------------G----DAARYQHLDVTIEEDW 66 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTT------------G----GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------------C----CceEEEEcccCCHHHH
Confidence 57899999999999999999999999999999999988777654432 1 5789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +..+++..+++|+.++.++++++. +.+-++||++||.......
T Consensus 67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~~~~- 145 (254)
T d1hdca_ 67 QRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGLMGL- 145 (254)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhcccc-
Confidence 8776 579999999996432 233456678999999999988874 4466799999998764432
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCc-cCHHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQ-VSNLQVAELL 292 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~-v~~~DvA~ai 292 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++...................+.+ ..++|||+++
T Consensus 146 -----~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v 220 (254)
T d1hdca_ 146 -----ALTSSYGASKWGVRGLSKLAAVELGTDRIRVNSVHPGMTYTPMTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAV 220 (254)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHH
T ss_pred -----cchhhHHHHHHHHHHHHHHHHHHhCCCceEEEEeeeCcccCccchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence 234579999999998866 379999999999998763111100000000111222333 3689999999
Q ss_pred HHHHhCCC-CCCCcEEEEecCCCC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
++|+.+.. ...|+++.|-++-..
T Consensus 221 ~fL~S~~a~~itG~~i~vDGG~t~ 244 (254)
T d1hdca_ 221 VKLLSDTSSYVTGAELAVDGGWTT 244 (254)
T ss_dssp HHHHSGGGTTCCSCEEEESTTTTT
T ss_pred HHHhchhhCCCCCceEEeCCCccC
Confidence 99997543 357899988877543
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=99.90 E-value=2.4e-23 Score=196.54 Aligned_cols=216 Identities=12% Similarity=0.089 Sum_probs=155.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+..+.. .+.++.. | .++.++.+|++|.++
T Consensus 2 rL~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~--~~~~~~~---------g----~~~~~~~~Dvs~~~~ 66 (247)
T d2ew8a1 2 RLKDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEA--EAAIRNL---------G----RRVLTVKCDVSQPGD 66 (247)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHH--HHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHH--HHHHHHc---------C----CcEEEEEeeCCCHHH
Confidence 367899999999999999999999999999999999875322 2223322 2 679999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++.+++. +.+-+++|++||.......
T Consensus 67 v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~~ 146 (247)
T d2ew8a1 67 VEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYWLKI 146 (247)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGGSCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhcccC
Confidence 88775 679999999996432 334566778999999999988774 4466799999998764332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-cc-ccceeecccCcccCCccCHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KE-THNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~-~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.....|+.+|...+.+.+ .+|++++.|.||++.++.... .. ...-.........+.+..++|||+
T Consensus 147 ------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~l~r~~~pedvA~ 220 (247)
T d2ew8a1 147 ------EAYTHYISTKAANIGFTRALASDLGKDGITVNAIAPSLVRTATTEASALSAMFDVLPNMLQAIPRLQVPLDLTG 220 (247)
T ss_dssp ------SSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCC------------------CTTSSSCSCCCTHHHHH
T ss_pred ------cccccchhhhccHHHHHHHHHHHhcccCeEEEEEeeCCCCCccccccccchhHHHHHHHhccCCCCCCHHHHHH
Confidence 234579999999987765 379999999999998763211 10 000111111223445678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|+.+.. ...|+++.|-++-
T Consensus 221 ~v~fL~S~~s~~itG~~i~vDGG~ 244 (247)
T d2ew8a1 221 AAAFLASDDASFITGQTLAVDGGM 244 (247)
T ss_dssp HHHHHTSGGGTTCCSCEEEESSSC
T ss_pred HHHHHhCchhcCCcCCeEEECCCE
Confidence 9999997543 3478899887763
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.1e-23 Score=199.39 Aligned_cols=215 Identities=15% Similarity=0.127 Sum_probs=160.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||+++++.|+++|++|++.+|++++.+.+.+++ +++.++.+|++|.++
T Consensus 3 rl~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~-----------------~~~~~~~~Dvs~~~~ 65 (250)
T d1ydea1 3 RYAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQEL-----------------PGAVFILCDVTQEDD 65 (250)
T ss_dssp TTTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHC-----------------TTEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEccCCCHHH
Confidence 467899999999999999999999999999999999988777655431 568899999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++++++... +-+++|++||.......
T Consensus 66 v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~~~~~ 145 (250)
T d1ydea1 66 VKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVGAIGQ 145 (250)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHHHHCC
T ss_pred HHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccccccc
Confidence 88776 578999999995321 22335667899999999998887432 22699999997663321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcc-cccc-----cceeecccCcccCCccCHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA-YKET-----HNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~-~~~~-----~~~~~~~~~~~~~~~v~~~ 286 (446)
.....|..+|..++.+.+ .+|++++.|.||++.++... .... ..+.-.......+.+..++
T Consensus 146 ------~~~~~Y~asKaal~~lt~~lA~e~a~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~p~ 219 (250)
T d1ydea1 146 ------AQAVPYVATKGAVTAMTKALALDESPYGVRVNCISPGNIWTPLWEELAALMPDPRASIREGMLAQPLGRMGQPA 219 (250)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCCHHHHHHHTTSSSHHHHHHHHHHTSTTSSCBCHH
T ss_pred ------cCcchhHHHHhhHHHHHHHHHHHhcccCeEEEEEeeCCCCChhHHHHhhcCCCHHHHHHHHHhcCCCCCCCCHH
Confidence 234579999999998865 37999999999999775211 0000 0000001122345678999
Q ss_pred HHHHHHHHHHhCCCCCCCcEEEEecCCC
Q 013273 287 QVAELLACMAKNRSLSYCKVVEVIAETT 314 (446)
Q Consensus 287 DvA~ai~~ll~~~~~~~~~v~ni~~~~~ 314 (446)
|||+++++|+.+.....|+++.|-++..
T Consensus 220 eva~~v~fL~Sda~~itG~~i~vDGG~~ 247 (250)
T d1ydea1 220 EVGAAAVFLASEANFCTGIELLVTGGAE 247 (250)
T ss_dssp HHHHHHHHHHHHCTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHhCccCCCcCCeEEECCCcc
Confidence 9999999999754445789998887753
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=99.90 E-value=2.2e-23 Score=198.09 Aligned_cols=220 Identities=14% Similarity=0.087 Sum_probs=165.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++.+.+.+++.... ...++.++.+|++|.+++
T Consensus 2 l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~-----------~~~~~~~~~~Dvt~~~~v 70 (258)
T d1iy8a_ 2 FTDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETA-----------PDAEVLTTVADVSDEAQV 70 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHC-----------TTCCEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhC-----------CCCeEEEEeccCCCHHHH
Confidence 567899999999999999999999999999999999998887776665431 125789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|++|||||.... +..+|+..+++|+.++.++++++. +.+-++||++||.......
T Consensus 71 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~~ 150 (258)
T d1iy8a_ 71 EAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGIRGI 150 (258)
T ss_dssp HHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGTSBC
T ss_pred HHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhccCC
Confidence 8775 679999999995321 234466778999999999988773 3466799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc------cccc--eeecccCcccCCccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHN--ITLSQEDTLFGGQVS 284 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~------~~~~--~~~~~~~~~~~~~v~ 284 (446)
.....|..+|..++.+.+ .+||+++.|.||++.++..... .... ..........+.+..
T Consensus 151 ------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ 224 (258)
T d1iy8a_ 151 ------GNQSGYAAAKHGVVGLTRNSAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDPENPRKAAEEFIQVNPSKRYGE 224 (258)
T ss_dssp ------SSBHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCTTCHHHHHHHHHTTCTTCSCBC
T ss_pred ------CCchHHHHHHHHHHHHHHHHHHHhCccCceEEEEeeCcccCHHHHHHHhhcCcccHHHHHHHHHhcCCCCCCcC
Confidence 234679999999987765 3799999999999987631100 0000 000011223456789
Q ss_pred HHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 285 NLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 285 ~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
++|+|+++++|+.+.. ...|+++.|-++..
T Consensus 225 p~dvA~~v~fL~S~~s~~itG~~i~VDGG~s 255 (258)
T d1iy8a_ 225 APEIAAVVAFLLSDDASYVNATVVPIDGGQS 255 (258)
T ss_dssp HHHHHHHHHHHTSGGGTTCCSCEEEESTTTT
T ss_pred HHHHHHHHHHHhCchhcCCcCceEEcCcchh
Confidence 9999999999997543 35788998887754
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.90 E-value=2.7e-24 Score=212.07 Aligned_cols=241 Identities=13% Similarity=0.063 Sum_probs=170.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+|||||||||||++|++.|+++|++|++++|+..+...+.+... ..++++++.+||+|.+.+.
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~--------------~~~~i~~~~~Dl~d~~~l~ 72 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETAR--------------VADGMQSEIGDIRDQNKLL 72 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTT--------------TTTTSEEEECCTTCHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhh--------------cccCCeEEEeeccChHhhh
Confidence 56899999999999999999999999999999998776554432211 1267999999999999999
Q ss_pred HHhc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-------Cchhhhch
Q 013273 159 PALG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-------FPAAILNL 227 (446)
Q Consensus 159 ~a~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-------~~~~~~~~ 227 (446)
+++. .+|+|+|+|+.... ...++...+.+|+.|+.++++++++.+..++++.+|.....++ .++....|
T Consensus 73 ~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~p 152 (356)
T d1rkxa_ 73 ESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNITSDKCYDNKEWIWGYRENEAMGG 152 (356)
T ss_dssp HHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEECCGGGBCCCCSSSCBCTTSCBCC
T ss_pred hhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccccccccccccccccccccccccCC
Confidence 9885 56999999986432 2334556688899999999999998755544444443332221 12334567
Q ss_pred hhHHHHHHHHHHHHHH-------------hCCCCEEEEecCCccCCCcccccc-----------cceeecccCcccCCcc
Q 013273 228 FWGVLLWKRKAEEALI-------------ASGLPYTIVRPGGMERPTDAYKET-----------HNITLSQEDTLFGGQV 283 (446)
Q Consensus 228 ~~~Y~~sK~~~E~~l~-------------~~gl~~tivRPg~v~gp~~~~~~~-----------~~~~~~~~~~~~~~~v 283 (446)
...|+.+|...|..++ ..++.++++||+.+|||++..... ....+.........++
T Consensus 153 ~~~y~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (356)
T d1rkxa_ 153 YDPYSNSKGCAELVTSSYRNSFFNPANYGQHGTAVATVRAGNVIGGGDWALDRIVPDILRAFEQSQPVIIRNPHAIRPWQ 232 (356)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHSCGGGHHHHCCEEEEEECCCEECTTCCCSSCHHHHHHHHHHTTCCEECSCTTCEECCE
T ss_pred CCccccccccchhhhhHHhhhcccchhccccCceEEeccCCCeeCCCcchhhHHHHHHHHHHhCCCceEEeecccccccc
Confidence 7889999999987764 257899999999999997532110 1111112223334679
Q ss_pred CHHHHHHHHHHHHhCCC---CCCCcEEEE--ecCCCCChhhHHHHHHhccCCCCC
Q 013273 284 SNLQVAELLACMAKNRS---LSYCKVVEV--IAETTAPLTPMEELLAKIPSQRAE 333 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~---~~~~~v~ni--~~~~~~t~~~i~e~l~~i~~~~~~ 333 (446)
|+.|+|++++.++.+.. ...+...+. ......+..++.+.+.+..+....
T Consensus 233 ~v~D~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 287 (356)
T d1rkxa_ 233 HVLEPLSGYLLLAQKLYTDGAEYAEGWNFGPNDADATPVKNIVEQMVKYWGEGAS 287 (356)
T ss_dssp ETHHHHHHHHHHHHHHHHTCGGGCSEEECCCCGGGCEEHHHHHHHHHHHHCTTCC
T ss_pred ccccccchhhhhhhhhcccccccccccccccccccccccchhhhhhHHHhCCCcc
Confidence 99999999999887632 112223332 234445778888888888877654
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=1.6e-23 Score=197.50 Aligned_cols=212 Identities=17% Similarity=0.130 Sum_probs=160.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++ +++..+.+|++|.+++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~-----------------~~~~~~~~Dv~d~~~v 67 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVREC-----------------PGIEPVCVDLGDWEAT 67 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEEeCCCHHHH
Confidence 57899999999999999999999999999999999988777655432 4688899999999999
Q ss_pred HHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCCCchh
Q 013273 158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++++ +++|++|||||.... +.++++..+++|+.++.++.+++.+ .+.+++|++||.......
T Consensus 68 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---- 143 (244)
T d1pr9a_ 68 ERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARGVPGAIVNVSSQCSQRAV---- 143 (244)
T ss_dssp HHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred HHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHhCCcceEeecccccccccc----
Confidence 9887 467999999996432 3344566789999999988887643 345699999998764432
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--cccceeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--ETHNITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|+..+.+.+ .+|++++.|.||++.++..... ..............+.+..++|||+++++
T Consensus 144 --~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peevA~~v~f 221 (244)
T d1pr9a_ 144 --TNHSVYCSTKGALDMLTKVMALELGPHKIRVNAVNPTVVMTSMGQATWSDPHKAKTMLNRIPLGKFAEVEHVVNAILF 221 (244)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCSHHHHTTSCSHHHHHHHHTTCTTCSCBCHHHHHHHHHH
T ss_pred --cchhhhhhhHHHHHHHHHHHHHHhCCCcEEEEEEeeCcCcChHHhhhccChHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 234579999999998876 3799999999999987632110 00001011122334567899999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
|+.+.. ...|+++.|-++
T Consensus 222 L~S~~a~~itG~~i~vDGG 240 (244)
T d1pr9a_ 222 LLSDRSGMTTGSTLPVEGG 240 (244)
T ss_dssp HHSGGGTTCCSCEEEESTT
T ss_pred HhCchhCCcCCcEEEECcc
Confidence 997643 357888888765
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=99.90 E-value=1.5e-23 Score=199.46 Aligned_cols=218 Identities=14% Similarity=0.083 Sum_probs=159.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
|+++|++|||||+++||+++++.|+++|++|++.+|+. +..+.+.+++... .+ .++.++.+|++|.+
T Consensus 1 ~L~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~--------~g----~~~~~~~~Dv~~~~ 68 (260)
T d1x1ta1 1 MLKGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQ--------HG----VKVLYDGADLSKGE 68 (260)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHH--------HT----SCEEEECCCTTSHH
T ss_pred CCCcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHh--------cC----CcEEEEECCCCCHH
Confidence 46789999999999999999999999999999999975 4555555554332 12 57899999999999
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
++++++ +++|++|||||.... +..+|...+++|+.++.++++++. +.+-++||++||......
T Consensus 69 ~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~ 148 (260)
T d1x1ta1 69 AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGLVA 148 (260)
T ss_dssp HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccceec
Confidence 888876 579999999996432 334466778999999998887774 446679999999876443
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc----cce-------eecccCccc
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET----HNI-------TLSQEDTLF 279 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~----~~~-------~~~~~~~~~ 279 (446)
. .....|+.+|+..+.+.+ .+|++++.|.||++.++..... .. ... .........
T Consensus 149 ~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 222 (260)
T d1x1ta1 149 S------ANKSAYVAAKHGVVGFTKVTALETAGQGITANAICPGWVRTPLVEKQISALAEKNGVDQETAARELLSEKQPS 222 (260)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCC------------------------CHHHHCTT
T ss_pred c------CCcchhhhhhhhHHHhHHHHHHHhchhCcEEEEEecCCCCChhhhhhhhhhhhhcCCChHHHHHHHHHhcCCC
Confidence 2 234579999999998765 3799999999999987632110 00 000 000111224
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+.+..++|+|+++++|+.+.. ...|+++.|-++
T Consensus 223 ~R~g~pediA~~v~fL~S~~a~~itG~~i~vDGG 256 (260)
T d1x1ta1 223 LQFVTPEQLGGTAVFLASDAAAQITGTTVSVDGG 256 (260)
T ss_dssp CCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred CCCcCHHHHHHHHHHHhChhhCCCcCCEEEECcc
Confidence 567899999999999997543 357889988776
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=99.90 E-value=1.9e-23 Score=199.64 Aligned_cols=220 Identities=16% Similarity=0.189 Sum_probs=164.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++.. ..++.++.+|++|.++
T Consensus 3 rL~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~--------------~~~~~~~~~Dv~~~~~ 68 (268)
T d2bgka1 3 RLQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGS--------------PDVISFVHCDVTKDED 68 (268)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCC--------------TTTEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcC--------------CCceEEEEccCCCHHH
Confidence 46889999999999999999999999999999999999888877665532 2568899999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCc--------cCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccC
Q 013273 157 IEPAL-------GNASVVICCIGASEKE--------VFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~--------~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~ 217 (446)
+++++ +++|++|||||..... .++++..+++|+.++.++++++. +.+-+++|++||.....
T Consensus 69 v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~ii~iss~~~~~ 148 (268)
T d2bgka1 69 VRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAARVMIPAKKGSIVFTASISSFT 148 (268)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHGGGTCEEEEEECCGGGTC
T ss_pred HHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhcchHhhcCCCCccccccccccc
Confidence 88776 5789999999964321 12345568899999999988774 34666999999976644
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc----eeecccCcccCCccCH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN----ITLSQEDTLFGGQVSN 285 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~----~~~~~~~~~~~~~v~~ 285 (446)
.+. .....|+.+|+.++.+.+ .+|++++.|.||++.++..... .... ..........+.+..+
T Consensus 149 ~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~p 223 (268)
T d2bgka1 149 AGE-----GVSHVYTATKHAVLGLTTSLCTELGEYGIRVNCVSPYIVASPLLTDVFGVDSSRVEELAHQAANLKGTLLRA 223 (268)
T ss_dssp CCT-----TSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCCSCCCCTTSSSCCHHHHHHHHHHTCSSCSCCCCH
T ss_pred ccc-----ccccccchhHHHHHhCHHHHHHHhChhCeEEEecCCCCccChHHhhhhcCCHHHHHHHHHhccccCCCCcCH
Confidence 322 112369999999998876 3799999999999988742110 0000 0001112234567899
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecCCCC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAETTA 315 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~~ 315 (446)
+|||+++++|+.+.. ...|+++.|-++-..
T Consensus 224 edvA~~v~fL~S~~s~~itGq~i~VDGG~t~ 254 (268)
T d2bgka1 224 EDVADAVAYLAGDESKYVSGLNLVIDGGYTR 254 (268)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTTGGG
T ss_pred HHHHHHHHHHhChhhCCccCceEEECcCccc
Confidence 999999999997543 357899988877543
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=99.90 E-value=1.3e-23 Score=199.38 Aligned_cols=215 Identities=13% Similarity=0.127 Sum_probs=162.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++++.+.+++ + .++.++.+|++|.+++
T Consensus 3 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~------------~----~~~~~~~~Dvt~~~~v 66 (256)
T d1k2wa_ 3 LDGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEI------------G----PAACAIALDVTDQASI 66 (256)
T ss_dssp TTTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHH------------C----TTEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh------------C----CceEEEEeeCCCHHHH
Confidence 56889999999999999999999999999999999998877766543 1 5789999999999998
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|++|||||.... +.++++..+++|+.++.++++++.. .+.++||++||.......
T Consensus 67 ~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~~~~~~~~g~Iv~isS~~~~~~~ 146 (256)
T d1k2wa_ 67 DRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARAMIAGGRGGKIINMASQAGRRGE 146 (256)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccchhHHhccCCccccccchhhcccc
Confidence 8876 578999999996432 2334566789999999999887532 235699999998764432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----cccee------ecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNIT------LSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~~~~------~~~~~~~~~~ 281 (446)
.....|..+|..++.+.+ .+|++++.|.||++.++...... ..... ........+.
T Consensus 147 ------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PlgR 220 (256)
T d1k2wa_ 147 ------ALVGVYCATKAAVISLTQSAGLNLIRHGINVNAIAPGVVDGEHWDGVDAKFADYENLPRGEKKRQVGAAVPFGR 220 (256)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCTTHHHHHHHHHHHHTCCTTHHHHHHHHHSTTSS
T ss_pred ------ccccchhhhhhHHHHHHHHHHHHhcccCeEEEEEecCCCCchhhhhhhhhhhhhccCChHHHHHHHHhcCCCCC
Confidence 234579999999998875 37999999999999887421100 00000 0001123456
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
+..++|||+++++|+.+.. ...|+++.|-++..
T Consensus 221 ~~~p~evA~~v~fL~S~~a~~iTG~~i~vDGG~~ 254 (256)
T d1k2wa_ 221 MGRAEDLTGMAIFLATPEADYIVAQTYNVDGGNW 254 (256)
T ss_dssp CBCHHHHHHHHHHTTSGGGTTCCSCEEEESTTSS
T ss_pred CcCHHHHHHHHHHHhCchhCCccCceEEECcchh
Confidence 7899999999999986543 34688998877754
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.90 E-value=1.7e-23 Score=199.02 Aligned_cols=218 Identities=16% Similarity=0.143 Sum_probs=152.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++... + .++.++.+|++|.++
T Consensus 5 ~LkgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---------~----~~~~~~~~Dv~~~~~ 71 (259)
T d1xq1a_ 5 SLKAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKK---------G----FQVTGSVCDASLRPE 71 (259)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CceEEEeccCCCHHH
Confidence 467899999999999999999999999999999999999988887776543 2 579999999999988
Q ss_pred HHHHh--------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL--------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~--------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +.+|++|||||... .+..+++..+++|+.++.++++++. +.+.++||++||......
T Consensus 72 v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~~~ 151 (259)
T d1xq1a_ 72 REKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAGVVS 151 (259)
T ss_dssp HHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC-------
T ss_pred HHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhccccccccccccccccccccc
Confidence 77665 34899999999643 2334566778999999999988774 446679999999766332
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccceeecccCcccCCccCHHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
. .....|..+|..++.+.+ .+|++++.|.||++.++.... ...............+.+..++|||+
T Consensus 152 ~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~ 225 (259)
T d1xq1a_ 152 A------SVGSIYSATKGALNQLARNLACEWASDGIRANAVAPAVIATPLAEAVYDDEFKKVVISRKPLGRFGEPEEVSS 225 (259)
T ss_dssp ---------CCHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEECCSCC-------------------------CCGGGGHH
T ss_pred c------cccccccccccchhhhhHHHHHHhcccCeEEEEeccCcccCHHhhhhchHHHHHHHHhCCCCCCCcCHHHHHH
Confidence 1 234579999999998766 379999999999998774211 11111111112223455678999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|+.+.. ...|+++.|-++-
T Consensus 226 ~v~fL~S~~s~~iTG~~i~vDGG~ 249 (259)
T d1xq1a_ 226 LVAFLCMPAASYITGQTICVDGGL 249 (259)
T ss_dssp HHHHHTSGGGTTCCSCEEECCCCE
T ss_pred HHHHHhCchhcCCcCcEEEeCCCE
Confidence 9999996543 3468888887663
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.90 E-value=1.4e-23 Score=197.52 Aligned_cols=212 Identities=16% Similarity=0.058 Sum_probs=159.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++++|+.+++.++.+++ +++.++.+|++|.+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~-----------------~~~~~~~~Dv~~~~~v 65 (242)
T d1cyda_ 3 FSGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKEC-----------------PGIEPVCVDLGDWDAT 65 (242)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHS-----------------TTCEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhc-----------------CCCeEEEEeCCCHHHH
Confidence 57899999999999999999999999999999999988776655421 5688999999999999
Q ss_pred HHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCCCCchh
Q 013273 158 EPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 158 ~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++++ +++|++|||||.... +..+++..+++|+.++.++.+++.+ .+.+++|++||.......
T Consensus 66 ~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~---- 141 (242)
T d1cyda_ 66 EKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINRGVPGSIVNVSSMVAHVTF---- 141 (242)
T ss_dssp HHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSCC----
T ss_pred HHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhhcccCcccccchhhccccC----
Confidence 9887 467999999996432 3334566688999999999887642 244699999998664321
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cccc-eeecccCcccCCccCHHHHHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ETHN-ITLSQEDTLFGGQVSNLQVAELLAC 294 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~~~-~~~~~~~~~~~~~v~~~DvA~ai~~ 294 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++..... .... ..........+.+..++|||+++++
T Consensus 142 --~~~~~Y~asKaal~~lt~~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~peeva~~v~f 219 (242)
T d1cyda_ 142 --PNLITYSSTKGAMTMLTKAMAMELGPHKIRVNSVNPTVVLTDMGKKVSADPEFARKLKERHPLRKFAEVEDVVNSILF 219 (242)
T ss_dssp --TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBTTHHHHHHTCCHHHHHHHHHHSTTSSCBCHHHHHHHHHH
T ss_pred --CccccccchHHHHHHHHHHHHHHhCccCeecccCCCCCccCHHHHhhcCCHHHHHHHHhcCCCCCCcCHHHHHHHHHH
Confidence 234579999999998876 3799999999999987632111 0000 0001112234567899999999999
Q ss_pred HHhCCC-CCCCcEEEEecC
Q 013273 295 MAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 295 ll~~~~-~~~~~v~ni~~~ 312 (446)
|+.+.. ...|+++.|-++
T Consensus 220 L~S~~s~~itG~~i~vDGG 238 (242)
T d1cyda_ 220 LLSDRSASTSGGGILVDAG 238 (242)
T ss_dssp HHSGGGTTCCSSEEEESTT
T ss_pred HhCchhcCcCCceEEeCcc
Confidence 997543 357889988766
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.90 E-value=8.3e-24 Score=198.56 Aligned_cols=206 Identities=14% Similarity=0.070 Sum_probs=154.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|+||||||+++||+++++.|+++|++|++.+|+.+.. .++..+++|++|.++
T Consensus 4 sl~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~------------------------~~~~~~~~Dv~~~~~ 59 (237)
T d1uzma1 4 PFVSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAP------------------------KGLFGVEVDVTDSDA 59 (237)
T ss_dssp CCCCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCC------------------------TTSEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchh------------------------cCceEEEEecCCHHH
Confidence 46789999999999999999999999999999999987532 467889999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHH----HhCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAA----TIAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa----~~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|++|||||... .+.++|+..+++|+.++..+.+++ ++.+.++||++||.......
T Consensus 60 v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~Iv~isS~~~~~~~ 139 (237)
T d1uzma1 60 VDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGI 139 (237)
T ss_dssp HHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC----
T ss_pred HHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccCCCceEEEcchhhccCC
Confidence 88776 57899999999642 233456677899999998887766 45566799999998764321
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELL 292 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai 292 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++...................+.+..++|||+++
T Consensus 140 ------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~pl~R~~~pedvA~~v 213 (237)
T d1uzma1 140 ------GNQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTRALDERIQQGALQFIPAKRVGTPAEVAGVV 213 (237)
T ss_dssp -------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHSCHHHHHHHGGGCTTCSCBCHHHHHHHH
T ss_pred ------cccHHHHHHHHHHHHHHHHHHhhhhcCCceeeeeeeCcCCChhhhccCHHHHHHHHhcCCCCCCcCHHHHHHHH
Confidence 234579999999998766 3799999999999987632111000000111223345678999999999
Q ss_pred HHHHhCCC-CCCCcEEEEecC
Q 013273 293 ACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 293 ~~ll~~~~-~~~~~v~ni~~~ 312 (446)
++|+.+.. ...|+++.+-++
T Consensus 214 ~fL~S~~s~~itG~~i~vdGG 234 (237)
T d1uzma1 214 SFLASEDASYISGAVIPVDGG 234 (237)
T ss_dssp HHHHSGGGTTCCSCEEEESTT
T ss_pred HHHhCchhcCCcCCeEEECCC
Confidence 99997543 356889988766
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=99.90 E-value=1.7e-23 Score=198.67 Aligned_cols=215 Identities=18% Similarity=0.183 Sum_probs=164.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++++. + .++.++.+|++|.++++
T Consensus 1 DgKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~---------g----~~~~~~~~Dvs~~~~v~ 67 (257)
T d2rhca1 1 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREA---------G----VEADGRTCDVRSVPEIE 67 (257)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeecCCHHHHH
Confidence 4688999999999999999999999999999999999988888877653 2 57999999999999888
Q ss_pred HHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh------CCCCEEEEEccccccCCC
Q 013273 159 PAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI------AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~------~~v~r~V~vSS~~~~~~~ 219 (446)
+++ +++|++|||||.... +.++++..+++|+.++.++++++.. .+.+++|++||.......
T Consensus 68 ~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~~~~~~~~~g~Ii~i~S~~~~~~~ 147 (257)
T d2rhca1 68 ALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKAGGMLERGTGRIVNIASTGGKQGV 147 (257)
T ss_dssp HHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTTSHHHHTEEEEEEECCGGGTSCC
T ss_pred HHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHHHHHHhcCCccccccccccccccc
Confidence 776 578999999996432 3344567789999999999998854 355689999998764332
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----cccc------eeecccCcccCC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHN------ITLSQEDTLFGG 281 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~~~~------~~~~~~~~~~~~ 281 (446)
.....|+.+|..++.+.+ .+|++++.|.||++.++..... .... +.........+.
T Consensus 148 ------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~e~~~~~~~~~PlgR 221 (257)
T d2rhca1 148 ------VHAAPYSASKHGVVGFTKALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITARVPIGR 221 (257)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEEEECSBCSHHHHHHHHHHHHHTTCCHHHHHHHHHTTSTTSS
T ss_pred ------ccchhHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCHHHHHHHhhhhhhcccChHHHHHHHHhcCCCCC
Confidence 234579999999998876 3789999999999977631110 0000 000011233456
Q ss_pred ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 282 QVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+..++|+|+++++|+.+.. ...|+++.|-++
T Consensus 222 ~~~pedia~~v~fL~S~~s~~itG~~i~vDGG 253 (257)
T d2rhca1 222 YVQPSEVAEMVAYLIGPGAAAVTAQALNVCGG 253 (257)
T ss_dssp CBCHHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CcCHHHHHHHHHHHhCchhcCCcCceEEECcC
Confidence 7899999999999996543 356888988766
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=99.90 E-value=3e-23 Score=196.07 Aligned_cols=211 Identities=12% Similarity=0.026 Sum_probs=156.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|++|||||+++||+++++.|+++|++|++.+|+++..+. .+ . .+..++++|++|.+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~-~~---~---------------~~~~~~~~Dv~~~~~v 63 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEV-AE---A---------------IGGAFFQVDLEDERER 63 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHH-HH---H---------------HTCEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHH-HH---H---------------cCCeEEEEeCCCHHHH
Confidence 678999999999999999999999999999999999875432 21 1 2356789999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~ 220 (446)
++++ +++|++|||||.... +.++|+..+++|+.++.++.+++. +.+-++||++||.......
T Consensus 64 ~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~~~~- 142 (248)
T d2d1ya1 64 VRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGLFAE- 142 (248)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSBC-
T ss_pred HHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccccccccc-
Confidence 7775 579999999996432 333456678999999999988884 4466799999998764432
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-----ccce-eecccCcccCCccCHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-----THNI-TLSQEDTLFGGQVSNLQ 287 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-----~~~~-~~~~~~~~~~~~v~~~D 287 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++...... .... .........+.+..++|
T Consensus 143 -----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~ped 217 (248)
T d2d1ya1 143 -----QENAAYNASKGGLVNLTRSLALDLAPLRIRVNAVAPGAIATEAVLEAIALSPDPERTRRDWEDLHALRRLGKPEE 217 (248)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHHHHHC--------CHHHHTTSTTSSCBCHHH
T ss_pred -----cccchhHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeCCCCCchHHHHhhcCCCHHHHHHHHHhcCCCCCCcCHHH
Confidence 334579999999998765 37999999999999876311100 0000 00112223456789999
Q ss_pred HHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 288 VAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 288 vA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+|+++++|+.+.. ...|+++.|-++-
T Consensus 218 ia~~v~fL~S~~s~~itG~~i~vDGG~ 244 (248)
T d2d1ya1 218 VAEAVLFLASEKASFITGAILPVDGGM 244 (248)
T ss_dssp HHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHhCchhcCCCCcEEEcCcCc
Confidence 9999999997543 3578899887764
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=99.90 E-value=2.9e-23 Score=196.88 Aligned_cols=215 Identities=18% Similarity=0.124 Sum_probs=162.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
+|++|||||+++||+++++.|+++|++|++.+|++++++.+.+++++. | .++.++.+|++|.+++++
T Consensus 1 KKValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~---------g----~~~~~~~~Dv~~~~~v~~ 67 (255)
T d1gega_ 1 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQA---------G----GHAVAVKVDVSDRDQVFA 67 (255)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHHHHHH
T ss_pred CCEEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeeCCCHHHHHH
Confidence 356899999999999999999999999999999999998888877653 2 578999999999998887
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----C-CCCEEEEEccccccCCCCc
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----A-KVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~-~v~r~V~vSS~~~~~~~~~ 221 (446)
++ +++|++|||||.... +.++|+..+++|+.++.++++++.. . +.+++|++||.......
T Consensus 68 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~g~Iv~isS~~~~~~~-- 145 (255)
T d1gega_ 68 AVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEAFKKEGHGGKIINACSQAGHVGN-- 145 (255)
T ss_dssp HHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSCEEEEEECCGGGTSCC--
T ss_pred HHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcchhhhhccccccccccchhhcccC--
Confidence 75 579999999996432 3344666789999999999888643 2 34589999998764322
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-----cccce------eecccCcccCCcc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-----ETHNI------TLSQEDTLFGGQV 283 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-----~~~~~------~~~~~~~~~~~~v 283 (446)
.....|+.+|+..+.+.+ .+|++++.|.||++.++..... ..... .........+.+.
T Consensus 146 ----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~ 221 (255)
T d1gega_ 146 ----PELAVYSSSKFAVRGLTQTAARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAKRITLGRLS 221 (255)
T ss_dssp ----TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHTTCTTCSCB
T ss_pred ----cccccchhCHHHHHhhHHHHHHHhhhhCcEEEEEecCcccChHHhhhhhhhHhhhcccchhHHHHHHhcCCCCCCc
Confidence 234579999999998765 3799999999999977631100 00000 0001123345678
Q ss_pred CHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 284 SNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.++|||+++++|+.+.. ...|+++.|-++-
T Consensus 222 ~peevA~~v~fL~S~~a~~itG~~i~vDGG~ 252 (255)
T d1gega_ 222 EPEDVAACVSYLASPDSDYMTGQSLLIDGGM 252 (255)
T ss_dssp CHHHHHHHHHHHHSGGGTTCCSCEEEESSSS
T ss_pred CHHHHHHHHHHHhCchhCCccCcEEEecCCE
Confidence 99999999999997543 3468889887764
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=99.90 E-value=2.7e-23 Score=197.63 Aligned_cols=218 Identities=16% Similarity=0.137 Sum_probs=164.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+.++++++.++++.. + .++.++.+|++|.++
T Consensus 5 ~L~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---------g----~~~~~~~~Dv~~~~~ 71 (259)
T d2ae2a_ 5 NLEGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSK---------G----FKVEASVCDLSSRSE 71 (259)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CEEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CCceEEEeeCCCHHH
Confidence 467899999999999999999999999999999999999988887777653 2 578899999999988
Q ss_pred HHHHh-------c-CCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------G-NASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~-~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ . .+|++|||||.... +.++++..+++|+.++.++.+++. +.+-++||++||......
T Consensus 72 v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~~~ 151 (259)
T d2ae2a_ 72 RQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALA 151 (259)
T ss_dssp HHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccccc
Confidence 87765 3 58999999996432 334456678999999999888774 445679999999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----cceeecccCcccCCccCHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----HNITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~~~~~~~~~~~~~~~v~~~ 286 (446)
. .....|..+|..++.+.+ .+|++++.|.||++.++....... ..+.........+.+..++
T Consensus 152 ~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~pl~R~g~pe 225 (259)
T d2ae2a_ 152 V------PYEAVYGATKGAMDQLTRCLAFEWAKDNIRVNGVGPGVIATSLVEMTIQDPEQKENLNKLIDRCALRRMGEPK 225 (259)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCSHHHHHHTTSHHHHHHHHHHHHTSTTCSCBCHH
T ss_pred c------ccccchHHHHHHHHHHHHHHHHHhCcCceEEEEeeeCcccCHHHHhhhhchhhHHHHHHHHhcCCCCCCcCHH
Confidence 2 234579999999998876 378999999999998763111000 0000001123345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|||+++++|+.+.. ...|+++.|-++-
T Consensus 226 dvA~~v~fL~S~~s~~itG~~i~VDGG~ 253 (259)
T d2ae2a_ 226 ELAAMVAFLCFPAASYVTGQIIYVDGGL 253 (259)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCchhCCCcCcEEEECCCe
Confidence 99999999997543 3468888887663
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.90 E-value=3.9e-23 Score=195.95 Aligned_cols=219 Identities=13% Similarity=0.120 Sum_probs=163.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|++|||||+++||+++++.|+++|++|++++|+.++..++.+++... ....++.++.+|++|.++++
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~-----------~~~~~~~~~~~Dv~~~~~v~ 70 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQ-----------FEPQKTLFIQCDVADQQQLR 70 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTT-----------SCGGGEEEEECCTTSHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHh-----------cCCCcEEEEEeecCCHHHHH
Confidence 4789999999999999999999999999999999998888776655421 12257999999999999888
Q ss_pred HHh-------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHh----CC---CCEEEEEccccccCCCCchhh
Q 013273 159 PAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATI----AK---VNHFIMVSSLGTNKFGFPAAI 224 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~----~~---v~r~V~vSS~~~~~~~~~~~~ 224 (446)
+++ +++|++|||||... ..+++..+++|+.++.++.+++.. .+ .++||++||.......
T Consensus 71 ~~~~~~~~~~G~iDilVnnAg~~~--~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~~~~----- 143 (254)
T d2gdza1 71 DTFRKVVDHFGRLDILVNNAGVNN--EKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGLMPV----- 143 (254)
T ss_dssp HHHHHHHHHHSCCCEEEECCCCCC--SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSCC-----
T ss_pred HHHHHHHHHcCCcCeecccccccc--cccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhccCC-----
Confidence 776 57999999999754 345677889999998888777743 21 2579999998764332
Q ss_pred hchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCccccccc-ce--eec-----ccCcccCCccCHHH
Q 013273 225 LNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETH-NI--TLS-----QEDTLFGGQVSNLQ 287 (446)
Q Consensus 225 ~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~-~~--~~~-----~~~~~~~~~v~~~D 287 (446)
.....|+.+|+.++.+.+ .+|++++.|.||++.++........ .. ... ......+.+..++|
T Consensus 144 -~~~~~Y~asKaal~~ltrs~ala~e~~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~ped 222 (254)
T d2gdza1 144 -AQQPVYCASKHGIVGFTRSAALAANLMNSGVRLNAICPGFVNTAILESIEKEENMGQYIEYKDHIKDMIKYYGILDPPL 222 (254)
T ss_dssp -TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESCBSSHHHHGGGCHHHHGGGGGGHHHHHHHHHHHCCBCHHH
T ss_pred -CCccchHHHHHHHHHHHHHHHHHHHhcCCCEEEEEEEcCCCCChhhhhccccccccccHHHHHHHHhcCCCCCCcCHHH
Confidence 234579999998876543 3789999999999976521110000 00 000 01112345789999
Q ss_pred HHHHHHHHHhCCCCCCCcEEEEecCCCCCh
Q 013273 288 VAELLACMAKNRSLSYCKVVEVIAETTAPL 317 (446)
Q Consensus 288 vA~ai~~ll~~~~~~~~~v~ni~~~~~~t~ 317 (446)
||+++++|+.++. ..|+++.|.++..+.+
T Consensus 223 vA~~v~fL~s~~~-itG~~i~VdGG~~~~~ 251 (254)
T d2gdza1 223 IANGLITLIEDDA-LNGAIMKITTSKGIHF 251 (254)
T ss_dssp HHHHHHHHHHCTT-CSSCEEEEETTTEEEE
T ss_pred HHHHHHHHHcCCC-CCCCEEEECCCCeeec
Confidence 9999999999875 6799999988865443
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=99.89 E-value=4.1e-23 Score=196.57 Aligned_cols=217 Identities=15% Similarity=0.121 Sum_probs=162.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch-hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ-RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~-~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.+ ..+.+.+++++. + .++.++.+|++|.++
T Consensus 5 L~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~---------g----~~~~~~~~Dvt~~~~ 71 (261)
T d1geea_ 5 LEGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKV---------G----GEAIAVKGDVTVESD 71 (261)
T ss_dssp GTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CEEEEEECCTTSHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHH
Confidence 67899999999999999999999999999999999864 566666666543 2 578999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCC-CEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKV-NHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v-~r~V~vSS~~~~~~ 218 (446)
+++++ +++|++|||||.... +..+|...+++|+.++.++.+++. +.+. ++||++||......
T Consensus 72 v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~~Iv~isS~~~~~~ 151 (261)
T d1geea_ 72 VINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKYFVENDIKGTVINMSSVHEKIP 151 (261)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCCEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhhhccccccccccccccchhccc
Confidence 88776 578999999996432 334466678999999999888774 3443 46889999876432
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc--ccceeecccCcccCCccCHHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE--THNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~--~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
. .....|+.+|..++.+.+ .+|++++.|.||++.++...... .............+.+..++|||
T Consensus 152 ~------~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pediA 225 (261)
T d1geea_ 152 W------PLFVHYAASKGGMKLMTETLALEYAPKGIRVNNIGPGAINTPINAEKFADPEQRADVESMIPMGYIGEPEEIA 225 (261)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECSBCSGGGHHHHHSHHHHHHHHTTCTTSSCBCHHHHH
T ss_pred C------ccccccccCCccchhhHHHHHHHhhhhCcEEEEEeeCcCcCHhHhhhcCCHHHHHHHHhcCCCCCCCCHHHHH
Confidence 1 234579999999998866 37999999999999877422110 00000011223345678999999
Q ss_pred HHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 290 ELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 290 ~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+++++|+.+.. ...|+++.|-++.
T Consensus 226 ~~v~fL~S~~s~~itG~~i~vDGG~ 250 (261)
T d1geea_ 226 AVAAWLASSEASYVTGITLFADGGM 250 (261)
T ss_dssp HHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHhCchhcCCcCCeEEECCCe
Confidence 99999997543 3578899887774
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.89 E-value=2.1e-23 Score=196.71 Aligned_cols=214 Identities=16% Similarity=0.109 Sum_probs=159.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
++||||||+++||+++++.|+++|++|++.+ |+.+..+.+.++++.. + .++.++.+|++|.+++++
T Consensus 2 pV~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~---------g----~~~~~~~~Dv~~~~~v~~ 68 (244)
T d1edoa_ 2 PVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAY---------G----GQAITFGGDVSKEADVEA 68 (244)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH---------T----CEEEEEECCTTSHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHc---------C----CcEEEEeCCCCCHHHHHH
Confidence 4899999999999999999999999999875 5666777777776654 2 578999999999998887
Q ss_pred Hh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch
Q 013273 160 AL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 160 a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~ 222 (446)
++ +++|++|||||.... +..+|+..+++|+.++.++.+++. +++-++||++||.......
T Consensus 69 ~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~~~~~--- 145 (244)
T d1edoa_ 69 MMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVGLIGN--- 145 (244)
T ss_dssp HHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHHHHCC---
T ss_pred HHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhhcCCC---
Confidence 75 578999999996432 334466778999999999988774 4466799999998763321
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
.....|+.+|...+.+.+ .+|++++.|.||++.++...................+.+..++|||+++++|
T Consensus 146 ---~~~~~Y~asKaal~~ltk~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~~~p~dvA~~v~fL 222 (244)
T d1edoa_ 146 ---IGQANYAAAKAGVIGFSKTAAREGASRNINVNVVCPGFIASDMTAKLGEDMEKKILGTIPLGRTGQPENVAGLVEFL 222 (244)
T ss_dssp ---TTCHHHHHHHHHHHHHHHHHHHHHHTTTEEEEEEEECSBCSHHHHTTCHHHHHHHHTSCTTCSCBCHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHChHHHHHHHhhhCcEEEEEecceeccHHHHHhhHHHHHHHHhcCCCCCCcCHHHHHHHHHHH
Confidence 234579999999998866 3799999999999987621110000000011223345678999999999999
Q ss_pred HhCCC--CCCCcEEEEecCC
Q 013273 296 AKNRS--LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~--~~~~~v~ni~~~~ 313 (446)
+.++. ...|+++.+-++-
T Consensus 223 a~S~~a~~itG~~i~vdGG~ 242 (244)
T d1edoa_ 223 ALSPAASYITGQAFTIDGGI 242 (244)
T ss_dssp HHCSGGGGCCSCEEEESTTT
T ss_pred HCCchhcCCcCCeEEeCCCe
Confidence 74432 3468888887763
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.89 E-value=7.7e-23 Score=201.80 Aligned_cols=230 Identities=17% Similarity=0.104 Sum_probs=168.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh-cH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-QI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-~~ 157 (446)
++|+|+|||||||||++|+++|+++||+|++++|+.++.... .+. ..++++++++|+.|.. .+
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~--~~~--------------~~~~v~~~~gD~~d~~~~~ 65 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAE--ELQ--------------AIPNVTLFQGPLLNNVPLM 65 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHH--HHH--------------TSTTEEEEESCCTTCHHHH
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhh--hhc--------------ccCCCEEEEeeCCCcHHHH
Confidence 467999999999999999999999999999999988764321 111 1268999999999854 46
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHH
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRK 237 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~ 237 (446)
+.++.++|+++++.... ...|+..+.+++++|+++|++++|+.||........ ......|..+|..
T Consensus 66 ~~a~~~~~~~~~~~~~~----------~~~~~~~~~~~~~aa~~agv~~~v~~Ss~~~~~~~~----~~~~~~~~~~k~~ 131 (350)
T d1xgka_ 66 DTLFEGAHLAFINTTSQ----------AGDEIAIGKDLADAAKRAGTIQHYIYSSMPDHSLYG----PWPAVPMWAPKFT 131 (350)
T ss_dssp HHHHTTCSEEEECCCST----------TSCHHHHHHHHHHHHHHHSCCSEEEEEECCCGGGTS----SCCCCTTTHHHHH
T ss_pred HHHhcCCceEEeecccc----------cchhhhhhhHHHHHHHHhCCCceEEEeeccccccCC----cccchhhhhhHHH
Confidence 78889999999886432 234788899999999999998999999865422111 1222347789999
Q ss_pred HHHHHHhCCCCEEEEecCCccCCCccccc-c----------cceeecccCcccCCccCH-HHHHHHHHHHHhCC-CCCCC
Q 013273 238 AEEALIASGLPYTIVRPGGMERPTDAYKE-T----------HNITLSQEDTLFGGQVSN-LQVAELLACMAKNR-SLSYC 304 (446)
Q Consensus 238 ~E~~l~~~gl~~tivRPg~v~gp~~~~~~-~----------~~~~~~~~~~~~~~~v~~-~DvA~ai~~ll~~~-~~~~~ 304 (446)
.|.++++.+++++++|++++++....... . ..+...........+++. +|++++++.++.+. ....|
T Consensus 132 ~~~~~~~~~~~~~~vr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~~~G 211 (350)
T d1xgka_ 132 VENYVRQLGLPSTFVYAGIYNNNFTSLPYPLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQKWNG 211 (350)
T ss_dssp HHHHHHTSSSCEEEEEECEEGGGCBSSSCSSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHHHTT
T ss_pred HHHHHHhhccCceeeeeceeeccccccccccccccccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhhcCC
Confidence 99999999999999999998764221100 0 001111111222235665 79999999999764 22468
Q ss_pred cEEEEecCCCCChhhHHHHHHhccCCCCCCCCCCC
Q 013273 305 KVVEVIAETTAPLTPMEELLAKIPSQRAEPKESIA 339 (446)
Q Consensus 305 ~v~ni~~~~~~t~~~i~e~l~~i~~~~~~~~~~~~ 339 (446)
++|+++++ .+|..++++++++++|++.....++.
T Consensus 212 ~~~~~~g~-~~T~~eia~~l~~~~G~~v~~~~vp~ 245 (350)
T d1xgka_ 212 HRIALTFE-TLSPVQVCAAFSRALNRRVTYVQVPK 245 (350)
T ss_dssp CEEEECSE-EECHHHHHHHHHHHHTSCEEEEECSS
T ss_pred eEEEEeCC-cCCHHHHHHHHHHHHCCcceEEECCH
Confidence 89999875 58999999999999999876544433
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.89 E-value=1.3e-22 Score=196.52 Aligned_cols=222 Identities=14% Similarity=0.128 Sum_probs=165.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+.++.+.+.+++.... ......++.++.+|++|.++
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~--------~~~~~~~~~~~~~Dvs~~~~ 80 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANL--------PPTKQARVIPIQCNIRNEEE 80 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTS--------CTTCCCCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhh--------ccccCceEEEEeccCCCHHH
Confidence 4788999999999999999999999999999999999999888877776431 11123679999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh----CCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI----AKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~----~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +++|++|||||.... +..+++..+++|+.++..+++++.. .+.+++|++|+.+....
T Consensus 81 v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~~g~Ii~~ss~~~~~~- 159 (297)
T d1yxma1 81 VNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSSWMKEHGGSIVNIIVPTKAGF- 159 (297)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTHHHHCEEEEEECCCCTTCC-
T ss_pred HHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHhhccccccccccccccccccc-
Confidence 88775 579999999986432 3344666789999999999888753 35568888877543221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcc--cccccc--eeecccCcccCCccCHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA--YKETHN--ITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~--~~~~~~--~~~~~~~~~~~~~v~~~Dv 288 (446)
.....|+.+|..++.+.+ .+||+++.|.||++.++... +..... ..........+.+..++||
T Consensus 160 ------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~plgR~g~pedv 233 (297)
T d1yxma1 160 ------PLAVHSGAARAGVYNLTKSLALEWACSGIRINCVAPGVIYSQTAVENYGSWGQSFFEGSFQKIPAKRIGVPEEV 233 (297)
T ss_dssp ------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEECSBCCTGGGTTSGGGGGGGGTTGGGGSTTSSCBCTHHH
T ss_pred ------cccccchhHHHHHHHHHHHHHHHhcccCceEEEeeeCcCcCcchhhhccccCHHHHHHHHhcCCCCCCcCHHHH
Confidence 234579999999998876 37999999999999887421 111000 0001112234567889999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+++++|+.+.. ...|+++.|-++.
T Consensus 234 A~~v~fL~Sd~s~~iTG~~i~VDGG~ 259 (297)
T d1yxma1 234 SSVVCFLLSPAASFITGQSVDVDGGR 259 (297)
T ss_dssp HHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCchhcCcCCcEEEeCcCh
Confidence 999999997543 3578999887774
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=99.89 E-value=3.9e-23 Score=196.57 Aligned_cols=216 Identities=13% Similarity=0.079 Sum_probs=162.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++++|+.++++.+.++++.. | .++.++.+|++|.+++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~---------g----~~~~~~~~Dv~~~~~v 69 (260)
T d1zema1 3 FNGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREK---------G----VEARSYVCDVTSEEAV 69 (260)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTT---------T----SCEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEccCCCHHHH
Confidence 57899999999999999999999999999999999999888887776543 2 5789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 158 EPAL-------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
++++ +++|++|||||.... +..+|...+++|+.++.++++++. +.+-+++|++||.......
T Consensus 70 ~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~~~~~ 149 (260)
T d1zema1 70 IGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAGVKGP 149 (260)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHSCC
T ss_pred HHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhhccCC
Confidence 8776 579999999995421 223456678899999999988874 3456799999997664322
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc--------cccceee--------cccC
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK--------ETHNITL--------SQED 276 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~--------~~~~~~~--------~~~~ 276 (446)
.....|+.+|...+.+.+ .+|++++.|.||++.++..... ....... ....
T Consensus 150 ------~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (260)
T d1zema1 150 ------PNMAAYGTSKGAIIALTETAALDLAPYNIRVNAISPGYMGPGFMWERQVELQAKVGSQYFSTDPKVVAQQMIGS 223 (260)
T ss_dssp ------TTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCSSHHHHHHHHHHHHHTCTTSCSSHHHHHHHHHHT
T ss_pred ------cchHHHHHHHHHHHHHHHHHHHHhhhhCCEEEEeccCcccCcchhhcchhhhhhhcccccccCHHHHHHHHHhc
Confidence 234579999999998876 3799999999999987631100 0000000 0011
Q ss_pred cccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 277 TLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 277 ~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
...+.+..++|||+++++|+.+.. ...|+++.|-++
T Consensus 224 ~Pl~R~g~pedvA~~v~fL~S~~s~~itG~~i~VDGG 260 (260)
T d1zema1 224 VPMRRYGDINEIPGVVAFLLGDDSSFMTGVNLPIAGG 260 (260)
T ss_dssp STTSSCBCGGGSHHHHHHHHSGGGTTCCSCEEEESCC
T ss_pred CCCCCCcCHHHHHHHHHHHhCchhcCccCCeEEeCCC
Confidence 224557889999999999997643 346888877653
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.89 E-value=1.4e-22 Score=193.04 Aligned_cols=221 Identities=15% Similarity=0.163 Sum_probs=159.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||++++++|+++|++|++.+|+.++++++.+++.+... ...++.++.+|++|.+++
T Consensus 3 l~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~----------~~~~~~~~~~Dvt~~~~v 72 (264)
T d1spxa_ 3 FAEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGV----------SEQNVNSVVADVTTDAGQ 72 (264)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC----------CcCceEEEEccCCCHHHH
Confidence 5789999999999999999999999999999999999999888887765411 125799999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccC
Q 013273 158 EPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNK 217 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~ 217 (446)
++++ +++|++|||||.... +.++|+..+++|+.++.++++++... +.+++|+++|.....
T Consensus 73 ~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~S~~~~~ 152 (264)
T d1spxa_ 73 DEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKKAVPHLSSTKGEIVNISSIASGL 152 (264)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTTSSS
T ss_pred HHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhhhCCccccccCcceeeeeecccc
Confidence 8776 579999999996321 22345667889999999998888532 234677777754422
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-cce--e------ecccCcccCC
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNI--T------LSQEDTLFGG 281 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~--~------~~~~~~~~~~ 281 (446)
.+. .....|+.+|...+.+.+ .+|++++.|.||++.++....... ... . ........+.
T Consensus 153 ~~~-----~~~~~Y~asKaal~~lt~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R 227 (264)
T d1spxa_ 153 HAT-----PDFPYYSIAKAAIDQYTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKECVPAGV 227 (264)
T ss_dssp SCC-----TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHHHCTTSS
T ss_pred ccC-----CCchhhhhhhhhHHHHHHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHhcCCCCC
Confidence 222 234569999999988765 379999999999998763211100 000 0 0001123456
Q ss_pred ccCHHHHHHHHHHHHhCC--CCCCCcEEEEecCC
Q 013273 282 QVSNLQVAELLACMAKNR--SLSYCKVVEVIAET 313 (446)
Q Consensus 282 ~v~~~DvA~ai~~ll~~~--~~~~~~v~ni~~~~ 313 (446)
+..++|||+++++|+.++ ....|+++.|-++.
T Consensus 228 ~g~pedvA~~v~fL~S~~~s~~itG~~i~vDGG~ 261 (264)
T d1spxa_ 228 MGQPQDIAEVIAFLADRKTSSYIIGHQLVVDGGS 261 (264)
T ss_dssp CBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTG
T ss_pred CcCHHHHHHHHHHHhCCcccCCccCceEEeCCCh
Confidence 789999999999999643 33578899887763
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.89 E-value=9.6e-23 Score=195.32 Aligned_cols=221 Identities=15% Similarity=0.153 Sum_probs=163.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++.+... ...++.++.+|++|.+++
T Consensus 2 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~----------~~~~~~~~~~Dv~~~~~v 71 (274)
T d1xhla_ 2 FSGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGV----------PAEKINAVVADVTEASGQ 71 (274)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC----------CGGGEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCC----------CCcceEEEEeeCCCHHHH
Confidence 5689999999999999999999999999999999999999888887776421 125789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 158 EPAL-------GNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
++++ +++|++|||||.... +.++|+..+++|+.++..+++++. +.+.++++++||.+....
T Consensus 72 ~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~g~ii~~ss~~~~~~ 151 (274)
T d1xhla_ 72 DDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKEHLIKTKGEIVNVSSIVAGPQA 151 (274)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGSSSC
T ss_pred HHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhcccccccccccccccccccccccccchhhhhcccc
Confidence 8775 578999999995321 122356678899999999888875 345567887777654322
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-----c---c-eeecccCcccCCc
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-----H---N-ITLSQEDTLFGGQ 282 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-----~---~-~~~~~~~~~~~~~ 282 (446)
. .....|+.+|..++.+.+ .+|++++.|.||++.++....... . . +.........+.+
T Consensus 152 ~------~~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~iPlgR~ 225 (274)
T d1xhla_ 152 H------SGYPYYACAKAALDQYTRCTAIDLIQHGVRVNSVSPGAVATGFMGAMGLPETASDKLYSFIGSRKECIPVGHC 225 (274)
T ss_dssp C------TTSHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTSSC
T ss_pred C------CCCceehhhhhHHHHHHHHHHHHHhHhCCceeeeccCCCcCchhhhhcccchhhHHHHHHHHHHHcCCCCCCC
Confidence 1 234579999999998876 379999999999998763111000 0 0 0001112234567
Q ss_pred cCHHHHHHHHHHHHhC--CCCCCCcEEEEecCCC
Q 013273 283 VSNLQVAELLACMAKN--RSLSYCKVVEVIAETT 314 (446)
Q Consensus 283 v~~~DvA~ai~~ll~~--~~~~~~~v~ni~~~~~ 314 (446)
..++|||+++++|+.. .....|+++.|-++..
T Consensus 226 g~pediA~~v~fL~S~d~s~~itG~~i~vDGG~~ 259 (274)
T d1xhla_ 226 GKPEEIANIIVFLADRNLSSYIIGQSIVADGGST 259 (274)
T ss_dssp BCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred cCHHHHHHHHHHHcCCccccCccCcEEEeCcCHH
Confidence 8999999999999953 3345789998888754
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.89 E-value=1.5e-22 Score=193.66 Aligned_cols=223 Identities=15% Similarity=0.136 Sum_probs=161.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+++|++|||||+++||+++++.|+++|++|++.+|+.++++++.+++++.. ....++.++.+|++|.++
T Consensus 2 rL~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~----------~~~~~~~~~~~Dvs~~~~ 71 (272)
T d1xkqa_ 2 RFSNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSG----------VSEKQVNSVVADVTTEDG 71 (272)
T ss_dssp TTTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT----------CCGGGEEEEECCTTSHHH
T ss_pred CCCCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC----------CCCCceEEEEccCCCHHH
Confidence 3678999999999999999999999999999999999999888888776531 122579999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCcc----------CCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEcccccc
Q 013273 157 IEPAL-------GNASVVICCIGASEKEV----------FDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTN 216 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~~----------~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~ 216 (446)
+++++ +++|++|||||...... .+|...+++|+.++.++++++... +-+++|+++|....
T Consensus 72 v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~~~p~m~~~~g~iI~~~Ss~a~ 151 (272)
T d1xkqa_ 72 QDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKVKPHLVASKGEIVNVSSIVAG 151 (272)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCGGGS
T ss_pred HHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHhhcccccccCCccccccchhcc
Confidence 88776 57999999999643211 124556789999999999887532 22466666664322
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc--------c-eeecccCcccC
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH--------N-ITLSQEDTLFG 280 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~--------~-~~~~~~~~~~~ 280 (446)
..+. .....|+.+|+.++.+.+ .+|++++.|.||++.++........ . ..........+
T Consensus 152 ~~~~-----~~~~~Y~asKaal~~ltk~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~Plg 226 (272)
T d1xkqa_ 152 PQAQ-----PDFLYYAIAKAALDQYTRSTAIDLAKFGIRVNSVSPGMVETGFTNAMGMPDQASQKFYNFMASHKECIPIG 226 (272)
T ss_dssp SSCC-----CSSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCBCSSHHHHTTCCHHHHHHHHHHHHHCTTTCTTS
T ss_pred ccCC-----CCcchhhhHHHHHHHHHHHHHHHhcccCeEEEEEeeCCCcchhhhccCCchHHHHHHHHHHHHHhcCCCCC
Confidence 2221 234579999999987765 3899999999999987632110000 0 00011223345
Q ss_pred CccCHHHHHHHHHHHHhCC--CCCCCcEEEEecCCC
Q 013273 281 GQVSNLQVAELLACMAKNR--SLSYCKVVEVIAETT 314 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~--~~~~~~v~ni~~~~~ 314 (446)
.+..++|||+++++|+.++ ....|+++.|-++..
T Consensus 227 R~g~pediA~~v~fL~S~~as~~iTG~~i~vDGG~~ 262 (272)
T d1xkqa_ 227 AAGKPEHIANIILFLADRNLSFYILGQSIVADGGTS 262 (272)
T ss_dssp SCBCHHHHHHHHHHHHCHHHHTTCCSCEEEESTTGG
T ss_pred CCcCHHHHHHHHHHHhCcchhCCccCeEEEeCcCHH
Confidence 6789999999999999643 235789998887753
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=99.89 E-value=1.1e-22 Score=191.08 Aligned_cols=192 Identities=14% Similarity=0.134 Sum_probs=151.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCe-------EEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFR-------VRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~-------V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
++||||||+++||+++++.|+++|++ |++.+|+.++++.+.++++.. | .++.++.+|++|
T Consensus 2 ~VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~---------g----~~~~~~~~Dvt~ 68 (240)
T d2bd0a1 2 HILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAE---------G----ALTDTITADISD 68 (240)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTT---------T----CEEEEEECCTTS
T ss_pred CEEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhc---------C----CcEEEEEecCCC
Confidence 46899999999999999999999987 899999999988887776643 2 578999999999
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEcccccc
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTN 216 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~ 216 (446)
.+++++++ +++|++|||||.... +.++++..+++|+.++.++++++. +.+-+++|++||....
T Consensus 69 ~~~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 148 (240)
T d2bd0a1 69 MADVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT 148 (240)
T ss_dssp HHHHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred HHHHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence 99888765 578999999996432 344566778999999999888874 4466799999998764
Q ss_pred CCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 217 KFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 217 ~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
... .....|..+|+..+.+.+ .+|++++.|.||++.++.... ...........++|+|
T Consensus 149 ~~~------~~~~~Y~asK~al~~lt~~la~el~~~gIrvn~i~PG~v~T~~~~~---------~~~~~~~~~~~PedvA 213 (240)
T d2bd0a1 149 KAF------RHSSIYCMSKFGQRGLVETMRLYARKCNVRITDVQPGAVYTPMWGK---------VDDEMQALMMMPEDIA 213 (240)
T ss_dssp SCC------TTCHHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCBCSTTTCC---------CCSTTGGGSBCHHHHH
T ss_pred CCC------CCChHHHHHHHHHHHHHHHHHHHhCcCCeEEEEeeeCcccCchhhh---------cCHhhHhcCCCHHHHH
Confidence 432 234579999999887765 379999999999998773211 0111223357899999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
+++++++.++.
T Consensus 214 ~~v~~l~s~~~ 224 (240)
T d2bd0a1 214 APVVQAYLQPS 224 (240)
T ss_dssp HHHHHHHTSCT
T ss_pred HHHHHHHcCCc
Confidence 99999998765
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=99.88 E-value=2.9e-22 Score=190.27 Aligned_cols=217 Identities=18% Similarity=0.164 Sum_probs=161.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|+||||||+++||+++++.|+++|++|++++|++++++.+.++++.. + ..+.++.+|++|.++
T Consensus 3 ~L~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~---------~----~~~~~~~~D~s~~~~ 69 (258)
T d1ae1a_ 3 SLKGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREK---------G----LNVEGSVCDLLSRTE 69 (258)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CCceEEEeecCCHHH
Confidence 367899999999999999999999999999999999998888877776543 2 568899999999998
Q ss_pred HHHHh--------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL--------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~--------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +.+|+||||||.... +..+|...+++|+.++..+.+++. +.+.+++|++||......
T Consensus 70 ~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~~~g~ii~isS~~~~~~ 149 (258)
T d1ae1a_ 70 RDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYPLLKASQNGNVIFLSSIAGFSA 149 (258)
T ss_dssp HHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTSEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhccccccccccccccccccccccccccccccccccc
Confidence 87765 247999999996543 333456678899999999888774 446679999999877443
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc-----cceeecccCcccCCccCH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET-----HNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~-----~~~~~~~~~~~~~~~v~~ 285 (446)
. .....|+.+|...+.+.+ ..|+++++|.||++.++..... .. ..+.........+.+..+
T Consensus 150 ~------~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~plgR~~~p 223 (258)
T d1ae1a_ 150 L------PSVSLYSASKGAINQMTKSLACEWAKDNIRVNSVAPGVILTPLVETAIKKNPHQKEEIDNFIVKTPMGRAGKP 223 (258)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBC-------------CHHHHHHHHHHSTTCSCBCH
T ss_pred c------ccchhHHHHHHHHHHHHHHHHHhcCcCcEEEEEEeeCcccCcchhhhhhhhhhhHHHHHHHHhcCCCCCCcCH
Confidence 2 235579999999998876 3789999999999987632110 00 000000111234567899
Q ss_pred HHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 286 LQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+|||+++++|+.+.. ...|+++.|-++
T Consensus 224 ediA~~v~fL~S~~s~~itG~~i~vDGG 251 (258)
T d1ae1a_ 224 QEVSALIAFLCFPAASYITGQIIWADGG 251 (258)
T ss_dssp HHHHHHHHHHHSGGGTTCCSCEEEESTT
T ss_pred HHHHHHHHHHhChhhCCCcCcEEEeCCC
Confidence 999999999996543 346888888766
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.88 E-value=1.2e-22 Score=192.53 Aligned_cols=214 Identities=15% Similarity=0.134 Sum_probs=159.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|++++.+++.+++. .+..++.+|++|.++
T Consensus 3 rL~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~----------------~~~~~~~~Dv~~~~~ 66 (253)
T d1hxha_ 3 RLQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELG----------------ERSMFVRHDVSSEAD 66 (253)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHC----------------TTEEEECCCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhC----------------CCeEEEEeecCCHHH
Confidence 3678999999999999999999999999999999999988777665431 568889999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC---CCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA---KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~---~v~r~V~vSS~~~~~~~~ 220 (446)
+++++ +++|++|||||.... +.++|+..+++|+.++.++++++... .-++||++||.......
T Consensus 67 ~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~~~~- 145 (253)
T d1hxha_ 67 WTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSWLPI- 145 (253)
T ss_dssp HHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGTSCC-
T ss_pred HHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhhcCc-
Confidence 87765 578999999996432 33446677899999999988887532 33699999998764321
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------h--CCCCEEEEecCCccCCCccc--cc--ccce-eecccCcccCCccCHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------A--SGLPYTIVRPGGMERPTDAY--KE--THNI-TLSQEDTLFGGQVSNL 286 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~--~gl~~tivRPg~v~gp~~~~--~~--~~~~-~~~~~~~~~~~~v~~~ 286 (446)
.....|+.+|+.++.+.+ . ++++++.|.||++.++.... .. .... .........+.+..++
T Consensus 146 -----~~~~~Y~asKaal~~lt~~lA~e~~~~g~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~gr~~~pe 220 (253)
T d1hxha_ 146 -----EQYAGYSASKAAVSALTRAAALSCRKQGYAIRVNSIHPDGIYTPMMQASLPKGVSKEMVLHDPKLNRAGRAYMPE 220 (253)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEESEECCHHHHHHSCTTCCHHHHBCBTTTBTTCCEECHH
T ss_pred -----cccccccchhHHHHHHHHHHHHHHhhcCCCEEEEEEeECCCcCHhHHhhCcchhhHHHHHhCccccccCCCCCHH
Confidence 334579999999887765 1 45999999999998763111 00 0000 0111122245578899
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
|||+++++|+.+.. ...|++++|-++
T Consensus 221 dvA~~v~fL~S~~s~~itG~~i~VDGG 247 (253)
T d1hxha_ 221 RIAQLVLFLASDESSVMSGSELHADNS 247 (253)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESSS
T ss_pred HHHHHHHHHhChhhCCCcCcEEEECcc
Confidence 99999999997543 357888988665
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=99.88 E-value=1.1e-22 Score=193.29 Aligned_cols=225 Identities=13% Similarity=0.082 Sum_probs=161.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||+++++.|+++|++|++++|+.++..++.+++.+. .| .++.++.+|++|.++
T Consensus 6 ~l~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~--------~g----~~~~~~~~Dv~~~~~ 73 (260)
T d1h5qa_ 6 SFVNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKE--------FG----VKTKAYQCDVSNTDI 73 (260)
T ss_dssp CCTTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHH--------HT----CCEEEEECCTTCHHH
T ss_pred cCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHH--------hC----CceEEEEccCCCHHH
Confidence 467899999999999999999999999999999999998888776665432 12 578999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh-----CCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI-----AKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~-----~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|++|||||.... +..+++..+++|+.++.++.+++.+ .+.++++.+++......
T Consensus 74 v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~~~~~g~i~~~~s~~~~~~ 153 (260)
T d1h5qa_ 74 VTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKLWLQKQQKGSIVVTSSMSSQII 153 (260)
T ss_dssp HHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGTSC
T ss_pred HHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhcccccccccceEEEEeeccccccc
Confidence 88776 578999999996432 3334566788999999998877642 34456777777554222
Q ss_pred CCch-hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHH
Q 013273 219 GFPA-AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 219 ~~~~-~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
.... ........|+.+|...+.+.+ .+|++++.|.||++.++...................+.+..++|||+
T Consensus 154 ~~~~~~~~~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~R~g~pedvA~ 233 (260)
T d1h5qa_ 154 NQSSLNGSLTQVFYNSSKAACSNLVKGLAAEWASAGIRVNALSPGYVNTDQTAHMDKKIRDHQASNIPLNRFAQPEEMTG 233 (260)
T ss_dssp CEEETTEECSCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCGGGGGSCHHHHHHHHHTCTTSSCBCGGGGHH
T ss_pred cccccccCccccchhhhhhhHHHHHHHHHHHhchhCeEEeecCCCcccCcchhccCHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1100 011234579999999998765 47999999999999876422111100001112233456789999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++++|+.+.. ...|+++.|-++.
T Consensus 234 ~v~fL~S~~s~~itG~~i~VDGG~ 257 (260)
T d1h5qa_ 234 QAILLLSDHATYMTGGEYFIDGGQ 257 (260)
T ss_dssp HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHhcchhCCCcCceEEECCCe
Confidence 9999997543 3468899887763
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=4.4e-22 Score=188.92 Aligned_cols=209 Identities=19% Similarity=0.198 Sum_probs=153.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+.++.+++.+++++. + ...++.++.+|++|+++
T Consensus 7 ~lk~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~---------~--~~~~~~~~~~Dls~~~~ 75 (257)
T d1xg5a_ 7 RWRDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSA---------G--YPGTLIPYRCDLSNEED 75 (257)
T ss_dssp GGTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T--CSSEEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C--CCceEEEEEccCCCHHH
Confidence 367899999999999999999999999999999999999999988887764 1 12578999999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCC------CccCCCCCcccchHHHHHHHHHHHH----hCC--CCEEEEEccccccC
Q 013273 157 IEPAL-------GNASVVICCIGASE------KEVFDITGPYRIDFQATKNLVDAAT----IAK--VNHFIMVSSLGTNK 217 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~------~~~~~~~~~~~vNv~g~~~l~~aa~----~~~--v~r~V~vSS~~~~~ 217 (446)
+++++ +++|++|||||... .+..+++..+++|+.+..++.+++. +.+ -+++|++||.....
T Consensus 76 v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~ 155 (257)
T d1xg5a_ 76 ILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQSMKERNVDDGHIININSMSGHR 155 (257)
T ss_dssp HHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCCSCEEEEECCGGGTS
T ss_pred HHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHHHHHhccCCCceEEEechHhcC
Confidence 88765 67999999999642 2333456668899999988877763 333 46999999976532
Q ss_pred CCCchhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHH
Q 013273 218 FGFPAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 218 ~~~~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~Dv 288 (446)
.. + ......|+.+|..++.+.+ .+|+++++|.||.+-++...................+.++.++||
T Consensus 156 ~~-p---~~~~~~Y~~sKaal~~ltr~la~el~~~~~~I~vn~i~PG~i~t~~~~~~~~~~~~~~~~~~~~~r~~~pedv 231 (257)
T d1xg5a_ 156 VL-P---LSVTHFYSATKYAVTALTEGLRQELREAQTHIRATCISPGVVETQFAFKLHDKDPEKAAATYEQMKCLKPEDV 231 (257)
T ss_dssp CC-S---CGGGHHHHHHHHHHHHHHHHHHHHHHHTTCCCEEEEEEESCBCSSHHHHHTTTCHHHHHHHHC---CBCHHHH
T ss_pred CC-C---CcccHHHHHHHHHHHhCHHHHHHHHHhCCCCEEEEEEeCCCCCChhhhhcChhhHHHHHhcCCCCCCcCHHHH
Confidence 11 0 1234469999999887753 368999999999987653111110100011111223467899999
Q ss_pred HHHHHHHHhCCC
Q 013273 289 AELLACMAKNRS 300 (446)
Q Consensus 289 A~ai~~ll~~~~ 300 (446)
|+++++++.++.
T Consensus 232 A~~v~fL~s~~a 243 (257)
T d1xg5a_ 232 AEAVIYVLSTPA 243 (257)
T ss_dssp HHHHHHHHHSCT
T ss_pred HHHHHHHhCChh
Confidence 999999998875
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=4.4e-22 Score=187.46 Aligned_cols=195 Identities=17% Similarity=0.127 Sum_probs=152.7
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+++||||||+++||++++++|+++|++|++++|+.++++.+.++++.. | .++.++.+|++|.++
T Consensus 4 ~l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~---------~----~~~~~~~~Dvs~~~~ 70 (244)
T d1yb1a_ 4 SVTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGL---------G----AKVHTFVVDCSNRED 70 (244)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEeeCCCHHH
Confidence 467899999999999999999999999999999999999999888877653 2 679999999999988
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~ 219 (446)
+++++ +.+|++|||||.... +.++++..+++|+.|+.++++++. +.+-++||++||..+...
T Consensus 71 v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~~~~- 149 (244)
T d1yb1a_ 71 IYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAGHVS- 149 (244)
T ss_dssp HHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-CCC-
T ss_pred HHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchhcCC-
Confidence 88765 578999999996532 222355668899999999888774 556779999999876432
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------h---CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHH
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------A---SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVA 289 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~---~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA 289 (446)
...+..|..+|++.+.+.+ . .|+++++|+||++.++.... ...-.+..+.++|+|
T Consensus 150 -----~~~~~~Y~asKaal~~~~~~La~El~~~~~~gI~V~~i~PG~v~T~~~~~----------~~~~~~~~~~pe~va 214 (244)
T d1yb1a_ 150 -----VPFLLAYCSSKFAAVGFHKTLTDELAALQITGVKTTCLCPNFVNTGFIKN----------PSTSLGPTLEPEEVV 214 (244)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEEEEEETHHHHCSTTC----------THHHHCCCCCHHHHH
T ss_pred -----CCCcHHHHHHHHHHHHHHHHHHHHHHhhcCCCEEEEEEEcCCCCChhhhC----------cCccccCCCCHHHHH
Confidence 2345679999999887654 1 48999999999997652110 111123457899999
Q ss_pred HHHHHHHhCCC
Q 013273 290 ELLACMAKNRS 300 (446)
Q Consensus 290 ~ai~~ll~~~~ 300 (446)
+.++..+..+.
T Consensus 215 ~~i~~~~~~~~ 225 (244)
T d1yb1a_ 215 NRLMHGILTEQ 225 (244)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHhcCC
Confidence 99999887764
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=99.87 E-value=3.4e-22 Score=187.90 Aligned_cols=213 Identities=13% Similarity=0.077 Sum_probs=156.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|++|||||+++||+++++.|+++|++|++.+|+.++..++.++ + + .++.++++|++|.+++
T Consensus 3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~---------~----~~~~~~~~Dls~~~~i 66 (241)
T d2a4ka1 3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAA---L---------E----AEAIAVVADVSDPKAV 66 (241)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT---C---------C----SSEEEEECCTTSHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---c---------C----CceEEEEecCCCHHHH
Confidence 5789999999999999999999999999999999999876654432 1 1 5789999999999988
Q ss_pred HHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 158 EPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
++++ +++|++|||||.... +..++...+++|+.+..++.+++... +.+.++++||.+...
T Consensus 67 ~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~~~~~~~i~~~ss~a~~~----- 141 (241)
T d2a4ka1 67 EAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEVLEEGGSLVLTGSVAGLG----- 141 (241)
T ss_dssp HHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEECCCTTCC-----
T ss_pred HHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccccccccceeecccccccc-----
Confidence 7765 579999999985422 23345566889999999999988654 334566666654322
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACM 295 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~l 295 (446)
...+..|+.+|+..|.+.+ .+|+++++|.||.+-++...................+.+..++|||+++++|
T Consensus 142 --~~~~~~Y~~sK~al~~lt~~lA~el~~~gIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~p~~r~~~p~dva~~v~fL 219 (241)
T d2a4ka1 142 --AFGLAHYAAGKLGVVGLARTLALELARKGVRVNVLLPGLIQTPMTAGLPPWAWEQEVGASPLGRAGRPEEVAQAALFL 219 (241)
T ss_dssp --HHHHHHHHHCSSHHHHHHHHHHHHHTTTTCEEEEEEECSBCCGGGTTSCHHHHHHHHHTSTTCSCBCHHHHHHHHHHH
T ss_pred --ccCccccchhhHHHHHHHHHHHHHHhHhCCEEeeeccCcCCCHHHHhhhHhHHHHHHhCCCCCCCcCHHHHHHHHHHH
Confidence 1345679999999998876 3789999999999976532110000001111223345678999999999999
Q ss_pred HhCCC-CCCCcEEEEecCC
Q 013273 296 AKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 296 l~~~~-~~~~~v~ni~~~~ 313 (446)
+.+.. ...|+++.+-++.
T Consensus 220 ~S~~s~~itG~~i~vDGG~ 238 (241)
T d2a4ka1 220 LSEESAYITGQALYVDGGR 238 (241)
T ss_dssp HSGGGTTCCSCEEEESTTT
T ss_pred hcchhCCCcCceEEeCCCc
Confidence 97543 3468888887764
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=99.87 E-value=5.1e-22 Score=185.83 Aligned_cols=208 Identities=13% Similarity=0.085 Sum_probs=153.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-hc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~~ 156 (446)
+++|++|||||+++||+++++.|+++|++|++.+|+++..++ ...+++.+|+++. +.
T Consensus 2 LkgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~~----------------------~~~~~~~~Dv~~~~~~ 59 (234)
T d1o5ia_ 2 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLKR----------------------SGHRYVVCDLRKDLDL 59 (234)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHH----------------------TCSEEEECCTTTCHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHh----------------------cCCcEEEcchHHHHHH
Confidence 467899999999999999999999999999999999765443 3456788999863 44
Q ss_pred HHHHhcCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchhhhc
Q 013273 157 IEPALGNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAAILN 226 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~~~~ 226 (446)
+.+.++++|++|||||.... +.++++..+++|+.++..+++++. +.+.+++|++||....... .
T Consensus 60 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ii~i~S~~~~~~~------~ 133 (234)
T d1o5ia_ 60 LFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGRIVAITSFSVISPI------E 133 (234)
T ss_dssp HHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGTSCC------T
T ss_pred HHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhcccccccccccccccccccccccccc------c
Confidence 55666889999999996432 233455668899999988887774 4466799999997664332 3
Q ss_pred hhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 227 LFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 227 ~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
....|..+|..++.+.+ .+|++++.|.||++.++...... .............+.+..++|||+++++|+.+
T Consensus 134 ~~~~Y~asKaal~~ltk~lA~ela~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~pl~R~~~pediA~~v~fL~S~ 213 (234)
T d1o5ia_ 134 NLYTSNSARMALTGFLKTLSFEVAPYGITVNCVAPGWTETERVKELLSEEKKKQVESQIPMRRMAKPEEIASVVAFLCSE 213 (234)
T ss_dssp TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTHHHHSCHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred ccccchhHHHHHHHHHHHHHHHhcccCeEEeecccCccchhhhhhhcCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCh
Confidence 34579999999987765 37999999999999887422110 00111111233455678999999999999975
Q ss_pred CC-CCCCcEEEEecCC
Q 013273 299 RS-LSYCKVVEVIAET 313 (446)
Q Consensus 299 ~~-~~~~~v~ni~~~~ 313 (446)
.. ...|+++.|-++-
T Consensus 214 ~s~~itG~~i~vDGG~ 229 (234)
T d1o5ia_ 214 KASYLTGQTIVVDGGL 229 (234)
T ss_dssp GGTTCCSCEEEESTTC
T ss_pred hhcCCcCcEEEECccc
Confidence 43 3468999887764
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.87 E-value=8.8e-23 Score=195.13 Aligned_cols=219 Identities=14% Similarity=0.052 Sum_probs=160.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|||||||||||++|++.|.++|+.| ++++.... +.+|++|.+.++++
T Consensus 1 MKILItG~tGfiG~~l~~~L~~~g~~v-~~~~~~~~------------------------------~~~Dl~~~~~~~~~ 49 (298)
T d1n2sa_ 1 MNILLFGKTGQVGWELQRSLAPVGNLI-ALDVHSKE------------------------------FCGDFSNPKGVAET 49 (298)
T ss_dssp CEEEEECTTSHHHHHHHHHTTTTSEEE-EECTTCSS------------------------------SCCCTTCHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEE-EEECCCcc------------------------------ccCcCCCHHHHHHH
Confidence 689999999999999999999998654 44444321 23799999999999
Q ss_pred hc--CCCEEEEcccCCCC--ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHH
Q 013273 161 LG--NASVVICCIGASEK--EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGV 231 (446)
Q Consensus 161 ~~--~~D~VI~~Ag~~~~--~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y 231 (446)
++ ++|+|||+||.... ...++...+.+|+.++.+|++++++.+. +++++||..+.... .+.....|.+.|
T Consensus 50 i~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~ss~~~~~~~~~~~~~E~~~~~p~~~y 128 (298)
T d1n2sa_ 50 VRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANETGA-WVVHYSTDYVFPGTGDIPWQETDATSPLNVY 128 (298)
T ss_dssp HHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTTTTC-EEEEEEEGGGSCCCTTCCBCTTSCCCCSSHH
T ss_pred HHHcCCCEEEEecccccccccccCccccccccccccccchhhhhcccc-ccccccccccccCCCCCCCccccccCCCchH
Confidence 86 46999999986532 3344455678899999999999998886 78888887663322 233456677889
Q ss_pred HHHHHHHHHHHHhCCCCEEEEecCCccCC-Ccccccccc------eeecccCcccCCccCHHHHHHHHHHHHhC---CCC
Q 013273 232 LLWKRKAEEALIASGLPYTIVRPGGMERP-TDAYKETHN------ITLSQEDTLFGGQVSNLQVAELLACMAKN---RSL 301 (446)
Q Consensus 232 ~~sK~~~E~~l~~~gl~~tivRPg~v~gp-~~~~~~~~~------~~~~~~~~~~~~~v~~~DvA~ai~~ll~~---~~~ 301 (446)
+.+|..+|++++.....+.++|++..++. +........ ..+.........++|+.|+++++..++.. ..
T Consensus 129 ~~~k~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~i~~~~~~~- 207 (298)
T d1n2sa_ 129 GKTKLAGEKALQDNCPKHLIFRTSWVYAGKGNNFAKTMLRLAKERQTLSVINDQYGAPTGAELLADCTAHAIRVALNKP- 207 (298)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECSEECSSSCCHHHHHHHHHHHCSEEEEECSCEECCEEHHHHHHHHHHHHHHHHHCG-
T ss_pred hhhhhhhhhhHHhhhcccccccccceeeccCCccchhhhhhhcccceeecccceeecccccchHHHHHHHHHhhhhccc-
Confidence 99999999999987778888888777644 332211110 01111123345679999999999887752 22
Q ss_pred CCCcEEEEecCCCCChhhHHHHHHhccCCCC
Q 013273 302 SYCKVVEVIAETTAPLTPMEELLAKIPSQRA 332 (446)
Q Consensus 302 ~~~~v~ni~~~~~~t~~~i~e~l~~i~~~~~ 332 (446)
...++||++++...+..++++++.+..+...
T Consensus 208 ~~~~~~n~~~~~~~~~~~~~~~i~~~~~~~~ 238 (298)
T d1n2sa_ 208 EVAGLYHLVAGGTTTWHDYAALVFDEARKAG 238 (298)
T ss_dssp GGCEEEECCCBSCEEHHHHHHHHHHHHHHHT
T ss_pred cccccccccCCCceecHHHHHHHHhhhhccC
Confidence 3578999999998999999998887765543
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=99.86 E-value=1.3e-21 Score=187.51 Aligned_cols=213 Identities=12% Similarity=0.049 Sum_probs=155.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
+++|+||||||+++||+++++.|+++|++|++++|+.++++++.+++. .++.++.+|++|.+++
T Consensus 3 L~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~----------------~~~~~~~~Dv~~~~~~ 66 (276)
T d1bdba_ 3 LKGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHG----------------DNVLGIVGDVRSLEDQ 66 (276)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGEEEEECCTTCHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcC----------------CCeeEEecccccHHHH
Confidence 578999999999999999999999999999999999888776654321 5789999999999888
Q ss_pred HHHh-------cCCCEEEEcccCCCCc-------c----CCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccc
Q 013273 158 EPAL-------GNASVVICCIGASEKE-------V----FDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGT 215 (446)
Q Consensus 158 ~~a~-------~~~D~VI~~Ag~~~~~-------~----~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~ 215 (446)
++++ +++|++|||||..... . .+|+..+++|+.++.++++++. +.+ +++|+++|...
T Consensus 67 ~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~-g~iI~i~S~~~ 145 (276)
T d1bdba_ 67 KQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVKACLPALVASR-GNVIFTISNAG 145 (276)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT-CEEEEECCGGG
T ss_pred HHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHHHHHHHHHhcC-CCceeeeechh
Confidence 8775 5799999999964221 1 1245668899999999888874 334 58999998765
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH------hCCCCEEEEecCCccCCCccccc----ccce------eecccCccc
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI------ASGLPYTIVRPGGMERPTDAYKE----THNI------TLSQEDTLF 279 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~------~~gl~~tivRPg~v~gp~~~~~~----~~~~------~~~~~~~~~ 279 (446)
.... .....|+.+|+.++.+.+ ..+++++.|.||++.++...... .... .........
T Consensus 146 ~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~IrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 219 (276)
T d1bdba_ 146 FYPN------GGGPLYTAAKHAIVGLVRELAFELAPYVRVNGVGSGGINSDLRGPSSLGMGSKAISTVPLADMLKSVLPI 219 (276)
T ss_dssp TSTT------SSCHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCSCCCCCGGGC---------CHHHHHTTTCTT
T ss_pred ccCC------CCCchHHHHHHHHHHHHHHHHHHhhcceEEcccCCCCEecCcCCccchhhhhhccCcHHHHHHHHhcCCC
Confidence 3321 234569999999988766 24599999999999776311100 0000 001112234
Q ss_pred CCccCHHHHHHHHHHHHhC--CCCCCCcEEEEecCC
Q 013273 280 GGQVSNLQVAELLACMAKN--RSLSYCKVVEVIAET 313 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~--~~~~~~~v~ni~~~~ 313 (446)
+.+..++|+|+++++++.. .....|++++|-++-
T Consensus 220 gR~g~peeva~~v~fL~S~~~a~~itG~~i~VDGG~ 255 (276)
T d1bdba_ 220 GRMPEVEEYTGAYVFFATRGDAAPATGALLNYDGGL 255 (276)
T ss_dssp SSCCCGGGGSHHHHHHHCHHHHTTCSSCEEEESSSG
T ss_pred CCCcCHHHHHHHHHHHcCCcccCCeeCcEEEECcCh
Confidence 5577899999999999852 334579999987763
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=99.86 E-value=9.1e-22 Score=186.39 Aligned_cols=217 Identities=12% Similarity=0.075 Sum_probs=153.3
Q ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.+++|++|||||+| +||++++++|+++|++|++.+|++.......+..+. + .+..++.+|++|.
T Consensus 5 ~L~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~----------~----~~~~~~~~D~~~~ 70 (256)
T d1ulua_ 5 DLSGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEA----------L----GGALLFRADVTQD 70 (256)
T ss_dssp CCTTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHH----------T----TCCEEEECCTTCH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhc----------c----CcccccccccCCH
Confidence 36789999999998 899999999999999999999987654443332222 1 5678899999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
+++++++ +++|++|||||.... ..+++...+++|+.+...+++++... .-+++|++||...
T Consensus 71 ~~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~Iv~isS~~~ 150 (256)
T d1ulua_ 71 EELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRAEPLLREGGGIVTLTYYAS 150 (256)
T ss_dssp HHHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEECGGG
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHHHHHHhccCCEEEEEeehHh
Confidence 8888775 578999999986321 12234456788999999999888643 2358999999876
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~~~ 286 (446)
.... .....|..+|..++.+.+ .+|++++.|.||.+..+......... ..........+.+..++
T Consensus 151 ~~~~------~~~~~Y~asKaal~~ltr~lA~ela~~gIrVN~I~PG~i~t~~~~~~~~~~~~~~~~~~~~pl~R~~~pe 224 (256)
T d1ulua_ 151 EKVV------PKYNVMAIAKAALEASVRYLAYELGPKGVRVNAISAGPVRTVAARSIPGFTKMYDRVAQTAPLRRNITQE 224 (256)
T ss_dssp TSBC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCC----------CHHHHHHHHHHSTTSSCCCHH
T ss_pred cCCC------CCchHHHHHHHHHHHHHHHHHHHhcccCCEEeeeccceeeeccccchhhhHHHHHHHHhcCCCCCCcCHH
Confidence 4321 334579999999998876 37999999999999876432211000 00011122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|||+++++|+.+.. ...|+++.|-++.
T Consensus 225 dvA~~v~fL~S~~s~~itG~~i~VDGG~ 252 (256)
T d1ulua_ 225 EVGNLGLFLLSPLASGITGEVVYVDAGY 252 (256)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCchhCCccCCeEEECcCE
Confidence 99999999997643 3468888887663
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.86 E-value=3.8e-22 Score=191.24 Aligned_cols=226 Identities=14% Similarity=0.092 Sum_probs=149.5
Q ss_pred EEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcHH
Q 013273 83 AFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQIE 158 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~~ 158 (446)
|||||||||||++|++.|+++|+ +|+++++-.. +...+. .. ....+.. .|+.+.....
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~----~~--------------~~~~~~~~~~~~~~~~~~ 63 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV----DL--------------NIADYMDKEDFLIQIMAG 63 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH----TS--------------CCSEEEEHHHHHHHHHTT
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc----cc--------------chhhhccchHHHHHHhhh
Confidence 89999999999999999999995 7888864322 221111 00 1111111 1111111111
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCC-----CchhhhchhhHHHH
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFG-----FPAAILNLFWGVLL 233 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~-----~~~~~~~~~~~Y~~ 233 (446)
..+..+++|+|+|+.......+.......|+.++.+++++++..+++ +|+.||..+.... .......+.+.|+.
T Consensus 64 ~~~~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~v~~ss~~~~~~~~~~~~~~~~~~~~~~~Y~~ 142 (307)
T d1eq2a_ 64 EEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIP-FLYASSAATYGGRTSDFIESREYEKPLNVYGY 142 (307)
T ss_dssp CCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHHTCC-EEEEEEGGGGTTCCSCBCSSGGGCCCSSHHHH
T ss_pred hcccchhhhhhhccccccccccccccccccccccccccccccccccc-cccccccccccccccccccccccccccccccc
Confidence 22356899999998655544555556778899999999999999985 5555655442221 22334567788999
Q ss_pred HHHHHHHHHH----hCCCCEEEEecCCccCCCcccccccce----------------eecccCcccCCccCHHHHHHHHH
Q 013273 234 WKRKAEEALI----ASGLPYTIVRPGGMERPTDAYKETHNI----------------TLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 234 sK~~~E~~l~----~~gl~~tivRPg~v~gp~~~~~~~~~~----------------~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
+|..+|.+++ +.+++++++||+.+|||++........ ...........++|++|+++++.
T Consensus 143 ~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~ 222 (307)
T d1eq2a_ 143 SKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNL 222 (307)
T ss_dssp HHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGGGGGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHH
T ss_pred ccchhhhhccccccccccccccccceeEeeccccccccccccccccccccccccceeeecCccceeeeeeecccHHHHHH
Confidence 9999999887 479999999999999997543211111 11112223346899999999999
Q ss_pred HHHhCCCCCCCcEEEEecCCCCChhhHHHHHHhccCC
Q 013273 294 CMAKNRSLSYCKVVEVIAETTAPLTPMEELLAKIPSQ 330 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~~~t~~~i~e~l~~i~~~ 330 (446)
.++.+.. .++||++++...++.++++++.++.+.
T Consensus 223 ~~~~~~~---~~~~~~~~~~~~si~~i~~~i~~~~~~ 256 (307)
T d1eq2a_ 223 WFLENGV---SGIFNLGTGRAESFQAVADATLAYHKK 256 (307)
T ss_dssp HHHHHCC---CEEEEESCSCCBCHHHHHHHC------
T ss_pred HHhhhcc---ccccccccccchhHHHHHHHHHHhcCC
Confidence 9998865 679999999999999999998877654
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.86 E-value=4.2e-21 Score=183.48 Aligned_cols=220 Identities=16% Similarity=0.160 Sum_probs=160.5
Q ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 76 DSKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
.++++|++|||||+++||+++++.|+++|++|++.+|+. +..+.+.+++++. + .++.++.+|++|.
T Consensus 14 ~sL~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~---------g----~~~~~~~~D~~~~ 80 (272)
T d1g0oa_ 14 ASLEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKN---------G----SDAACVKANVGVV 80 (272)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTCH
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhh---------C----CceeeEeCCCCCH
Confidence 457889999999999999999999999999999998875 4555555555442 2 6799999999999
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCC
Q 013273 155 VQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFG 219 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~ 219 (446)
+++++++ +++|++|||+|.... ...++...+++|+.++.++.+++... .-+++++++|.......
T Consensus 81 ~~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~~~~~ 160 (272)
T d1g0oa_ 81 EDIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITGQAKA 160 (272)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGGTCSS
T ss_pred HHHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccccccc
Confidence 8887775 578999999986432 23335556889999999999999753 33578888876542221
Q ss_pred CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc------ccccee-------ecccCccc
Q 013273 220 FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK------ETHNIT-------LSQEDTLF 279 (446)
Q Consensus 220 ~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~------~~~~~~-------~~~~~~~~ 279 (446)
......|+.+|...+.+.+ .+|++++.|+||++.++..... ...... ........
T Consensus 161 -----~~~~~~Y~asKaal~~ltk~lA~e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl 235 (272)
T d1g0oa_ 161 -----VPKHAVYSGSKGAIETFARCMAIDMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQWSPL 235 (272)
T ss_dssp -----CSSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHHSCTT
T ss_pred -----ccchhhHHHHHHHHHHHHHHHHHHhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHccCCC
Confidence 1334569999999998876 3799999999999986521100 000000 01112334
Q ss_pred CCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 280 GGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
+.+..++|||+++++|+.+.. ...|+++.|-++.
T Consensus 236 gR~~~peevA~~v~fL~s~~s~~itG~~i~vDGG~ 270 (272)
T d1g0oa_ 236 RRVGLPIDIARVVCFLASNDGGWVTGKVIGIDGGA 270 (272)
T ss_dssp CSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCCcCHHHHHHHHHHHhCchhcCccCceEeECCCC
Confidence 678999999999999997543 3478888887764
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.85 E-value=2.5e-21 Score=183.76 Aligned_cols=217 Identities=14% Similarity=0.113 Sum_probs=160.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~---~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
.+++|+++||||+++||++++++|++ +|++|++++|+.++++.+.+++... ....++.++.+|++|
T Consensus 3 ~L~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~-----------~~~~~~~~~~~Dvs~ 71 (259)
T d1oaaa_ 3 GLGCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQ-----------QPDLKVVLAAADLGT 71 (259)
T ss_dssp CCBSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHH-----------CTTSEEEEEECCTTS
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhh-----------cCCceEEEEEccCCC
Confidence 46788999999999999999999986 6999999999999999888877653 112578999999999
Q ss_pred hhcHHHHhc-----------CCCEEEEcccCCCC---------ccCCCCCcccchHHHHHHHHHHHHhC----C--CCEE
Q 013273 154 RVQIEPALG-----------NASVVICCIGASEK---------EVFDITGPYRIDFQATKNLVDAATIA----K--VNHF 207 (446)
Q Consensus 154 ~~~~~~a~~-----------~~D~VI~~Ag~~~~---------~~~~~~~~~~vNv~g~~~l~~aa~~~----~--v~r~ 207 (446)
.++++++++ ..|++|||||.... +..++...+++|+.++.++++++... + .+++
T Consensus 72 ~~~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m~~~~~~~g~I 151 (259)
T d1oaaa_ 72 EAGVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCLTSGTLNAFQDSPGLSKTV 151 (259)
T ss_dssp HHHHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHHHHHHHHTSCCCTTCEEEE
T ss_pred HHHHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHHHHHHHHHHHhcCCCcccc
Confidence 998887751 35899999985321 11235567889999999999999653 2 3489
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-----hCCCCEEEEecCCccCCCccccc-c-cc--e-eecccCc
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-----ASGLPYTIVRPGGMERPTDAYKE-T-HN--I-TLSQEDT 277 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-----~~gl~~tivRPg~v~gp~~~~~~-~-~~--~-~~~~~~~ 277 (446)
|++||....... ..+..|+.+|+.++.+.+ ..|++++.|.||++.++...... . .. . .......
T Consensus 152 v~isS~~~~~~~------~~~~~Y~asKaal~~lt~~la~e~~gIrVn~v~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~ 225 (259)
T d1oaaa_ 152 VNISSLCALQPY------KGWGLYCAGKAARDMLYQVLAAEEPSVRVLSYAPGPLDNDMQQLARETSKDPELRSKLQKLK 225 (259)
T ss_dssp EEECCGGGTSCC------TTCHHHHHHHHHHHHHHHHHHHHCTTEEEEEEECCSBSSHHHHHHHHHCSCHHHHHHHHHHH
T ss_pred cccccccccCCC------ccchHHHHHHHHHHHHHHHHHhCCCCCEEEEEEcCCCCCHHHHHhhhcCCCHHHHHHHHhcC
Confidence 999998764332 335679999999987765 37999999999999876321100 0 00 0 0000111
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEe
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVI 310 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~ 310 (446)
..+....++|+|+++++++.+.....|+++++-
T Consensus 226 ~~~r~~~p~evA~~i~~ll~~~s~~TG~~idv~ 258 (259)
T d1oaaa_ 226 SDGALVDCGTSAQKLLGLLQKDTFQSGAHVDFY 258 (259)
T ss_dssp HTTCSBCHHHHHHHHHHHHHHCCSCTTEEEETT
T ss_pred CCCCCCCHHHHHHHHHHHhhhccCCCCCeEEec
Confidence 234568999999999999987665667777763
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=99.85 E-value=3.9e-21 Score=182.44 Aligned_cols=219 Identities=15% Similarity=0.135 Sum_probs=157.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc-hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV-QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~-~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.+|+||||||+++||+++++.|+++|++|++.+|+. +..+.+.+++++. | .++.++.+|++|.+
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~---------g----~~~~~~~~D~~~~~ 69 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKL---------G----AQGVAIQADISKPS 69 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHT---------T----CCEEEEECCTTSHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHc---------C----CCceEecCCCCCHH
Confidence 36789999999999999999999999999999876554 4456666666543 2 57999999999998
Q ss_pred cHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC
Q 013273 156 QIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~ 220 (446)
++++++ +++|++|||||.... +..+++..+++|+.+..++++++..+ .-+++++++|......+.
T Consensus 70 ~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~~~~~~ 149 (259)
T d1ja9a_ 70 EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAAVMTGI 149 (259)
T ss_dssp HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGGTCCSC
T ss_pred HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccccccCC
Confidence 888766 578999999996432 22334566889999999999998754 224677777654433232
Q ss_pred chhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-------cccce------eecccCcccC
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-------ETHNI------TLSQEDTLFG 280 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-------~~~~~------~~~~~~~~~~ 280 (446)
.....|+.+|+..+.+.+ ..|++++.|+||++.++..... ..... .........+
T Consensus 150 -----~~~~~Y~asK~al~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pl~ 224 (259)
T d1ja9a_ 150 -----PNHALYAGSKAAVEGFCRAFAVDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMNPLK 224 (259)
T ss_dssp -----CSCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTSTTS
T ss_pred -----CCchhHHHHHHHHHHHHHHHHHHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCCCCC
Confidence 223569999999988776 3799999999999976521100 00000 0001122344
Q ss_pred CccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 281 GQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 281 ~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
.+..++|||+++++|+.+.. .-.|+++.|-++.
T Consensus 225 R~g~p~eVa~~v~fL~S~~a~~itG~~i~vDGG~ 258 (259)
T d1ja9a_ 225 RIGYPADIGRAVSALCQEESEWINGQVIKLTGGG 258 (259)
T ss_dssp SCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTC
T ss_pred CCcCHHHHHHHHHHHhCchhcCCcCceEEeCCCC
Confidence 67899999999999998654 2468888887663
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.85 E-value=2e-21 Score=188.47 Aligned_cols=204 Identities=16% Similarity=0.060 Sum_probs=150.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc---------hhHHHHHHHHHHhhhcccccccCCCCCCceEEE
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV---------QRAENLVQSVKQMKLDGELANKGIQPVEMLELV 147 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~---------~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v 147 (446)
++++|++|||||+++||+++++.|+++|++|++.+|+. ..++.+.+++.. ....+
T Consensus 4 ~l~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~ 67 (302)
T d1gz6a_ 4 RFDGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRR----------------RGGKA 67 (302)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHH----------------TTCEE
T ss_pred CcCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhh----------------ccccc
Confidence 46789999999999999999999999999999987653 334444444332 23455
Q ss_pred EcCCCChhcHHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEE
Q 013273 148 ECDLEKRVQIEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMV 210 (446)
Q Consensus 148 ~~Dl~d~~~~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~v 210 (446)
.+|+.|.+++++++ +++|++|||||.... +..+++..+++|+.++.++++++. +++-++||++
T Consensus 68 ~~d~~~~~~~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~i 147 (302)
T d1gz6a_ 68 VANYDSVEAGEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMT 147 (302)
T ss_dssp EEECCCGGGHHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred ccccchHHHHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEe
Confidence 68888877766654 679999999996432 334466678999999999988874 4566799999
Q ss_pred ccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCcc
Q 013273 211 SSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQV 283 (446)
Q Consensus 211 SS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v 283 (446)
||....... .....|+.+|+.++.+.+ .+|++++.|.||++......... .-....+
T Consensus 148 sS~~~~~~~------~~~~~Y~asKaal~~lt~~la~E~~~~gIrVN~I~PG~~~t~~~~~~~----------~~~~~~~ 211 (302)
T d1gz6a_ 148 ASASGIYGN------FGQANYSAAKLGLLGLANTLVIEGRKNNIHCNTIAPNAGSRMTETVMP----------EDLVEAL 211 (302)
T ss_dssp CCHHHHHCC------TTCHHHHHHHHHHHHHHHHHHHHTGGGTEEEEEEEEECCSTTTGGGSC----------HHHHHHS
T ss_pred CChhhcCCC------CCcHHHHHHHHHHHHHHHHHHHHHhccCCceeeeCCCCCCcchhhcCc----------HhhHhcC
Confidence 997653321 234579999999998865 37999999999988654321110 0112346
Q ss_pred CHHHHHHHHHHHHhCCCCCCCcEEEEecC
Q 013273 284 SNLQVAELLACMAKNRSLSYCKVVEVIAE 312 (446)
Q Consensus 284 ~~~DvA~ai~~ll~~~~~~~~~v~ni~~~ 312 (446)
.++|||+++++|+.+.....|+++.+.++
T Consensus 212 ~PedvA~~v~fL~S~~a~itG~~i~vdGG 240 (302)
T d1gz6a_ 212 KPEYVAPLVLWLCHESCEENGGLFEVGAG 240 (302)
T ss_dssp CGGGTHHHHHHHTSTTCCCCSCEEEEETT
T ss_pred CHHHHHHHHHHHcCCCcCCCCcEEEeCCC
Confidence 78999999999986554457888888766
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=99.85 E-value=1.1e-20 Score=178.73 Aligned_cols=214 Identities=14% Similarity=0.089 Sum_probs=153.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC-Chhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~~ 156 (446)
+++|+||||||+++||+.++++|+++|++|+++.|+.++...+.+ +... ....++.++.+|++ +.++
T Consensus 3 l~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~-~~~~-----------~~~~~~~~~~~d~~~~~~~ 70 (254)
T d1sbya1 3 LTNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAE-LKAI-----------NPKVNITFHTYDVTVPVAE 70 (254)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHH-HHHH-----------CTTSEEEEEECCTTSCHHH
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHH-HHhh-----------CCCCCEEEEEeecCCCHHH
Confidence 678999999999999999999999999999999998776555433 2221 12368999999998 5555
Q ss_pred HHHHh-------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-------CCCEEEEEccccccCCCCch
Q 013273 157 IEPAL-------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-------KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-------~v~r~V~vSS~~~~~~~~~~ 222 (446)
+++++ +++|+||||||... ..+++..+++|+.|+.++.+++... ..+++|++||......
T Consensus 71 ~~~~~~~~~~~~g~iDilvnnAG~~~--~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~~~---- 144 (254)
T d1sbya1 71 SKKLLKKIFDQLKTVDILINGAGILD--DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGFNA---- 144 (254)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC--TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGTSC----
T ss_pred HHHHHHHHHHHcCCCCEEEeCCCCCC--HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhccC----
Confidence 65554 67999999999654 4566778999999999999888532 2458999999876433
Q ss_pred hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccc-ccee-ecccCcccCCccCHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKET-HNIT-LSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~-~~~~-~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
...+..|+.+|+....+.+ ..|++++.|.||++.++....... .... ..............+++|++++
T Consensus 145 --~~~~~~Y~asKaal~~~t~~la~el~~~gIrVn~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~va~~~~ 222 (254)
T d1sbya1 145 --IHQVPVYSASKAAVVSFTNSLAKLAPITGVTAYSINPGITRTPLVHTFNSWLDVEPRVAELLLSHPTQTSEQCGQNFV 222 (254)
T ss_dssp --CTTSHHHHHHHHHHHHHHHHHHHHHHHHSEEEEEEEECSEESHHHHSCCCGGGSCTTHHHHHTTSCCEEHHHHHHHHH
T ss_pred --CCCCHHHHHHHHHHHHHHHHHHhhccccCeEEEEEEeCCCcCccccccccchhHHHHHHhccccCCCCCHHHHHHHHH
Confidence 1335579999999887765 479999999999998762110000 0000 0000011123457899999999
Q ss_pred HHHhCCCCCCCcEEEEecCC
Q 013273 294 CMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~~~~~~v~ni~~~~ 313 (446)
.++++.. .|+++.+-++.
T Consensus 223 ~~~~~~~--tG~vi~vdgG~ 240 (254)
T d1sbya1 223 KAIEANK--NGAIWKLDLGT 240 (254)
T ss_dssp HHHHHCC--TTCEEEEETTE
T ss_pred HhhhCCC--CCCEEEECCCE
Confidence 9887653 68888887763
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=99.84 E-value=1.9e-21 Score=184.01 Aligned_cols=208 Identities=15% Similarity=0.073 Sum_probs=150.4
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL 161 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~ 161 (446)
++|||||+++||+++++.|+++|++|++.+|+.++.+++..... .++.+|+.|.+++++++
T Consensus 2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~-------------------~~~~~dv~~~~~~~~~~ 62 (252)
T d1zmta1 2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAE-------------------TYPQLKPMSEQEPAELI 62 (252)
T ss_dssp EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHH-------------------HCTTSEECCCCSHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhC-------------------cEEEeccCCHHHHHHHH
Confidence 69999999999999999999999999999999887766543221 12347888777766654
Q ss_pred -------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchh
Q 013273 162 -------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 162 -------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
+++|++|||||.... +.++++..+++|+.++.++++++. +.+-++||++||.......
T Consensus 63 ~~~~~~~G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~---- 138 (252)
T d1zmta1 63 EAVTSAYGQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPW---- 138 (252)
T ss_dssp HHHHHHHSCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCC----
T ss_pred HHHHHHcCCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeeccccccccccc----
Confidence 689999999985321 223355667899999998888774 4466799999998764321
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccc-------eeecccCcccCCccCHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THN-------ITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~-------~~~~~~~~~~~~~v~~~Dv 288 (446)
.....|..+|..++.+.+ .+|++++.|.||++.++...... ... ..........+.+..++||
T Consensus 139 --~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~e~~~~~~~~~pl~R~g~pedv 216 (252)
T d1zmta1 139 --KELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPTEPWKTNPEHVAHVKKVTALQRLGTQKEL 216 (252)
T ss_dssp --TTCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBHHHHTTCHHHHHHHHHHSSSSSCBCHHHH
T ss_pred --ccccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhcccccCCHHHHHHHHhcCCCCCCcCHHHH
Confidence 234579999999998766 37999999999999876421110 000 0000112224567899999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
|+++++|+.+.. ...|+++.|-++-.
T Consensus 217 A~~v~fL~S~~s~~iTG~~i~vdGG~~ 243 (252)
T d1zmta1 217 GELVAFLASGSCDYLTGQVFWLAGGFP 243 (252)
T ss_dssp HHHHHHHHTTSCGGGTTCEEEESTTCC
T ss_pred HHHHHHHhCchhcCCcCCeEEECCCce
Confidence 999999998654 34789998887743
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=3.6e-20 Score=174.34 Aligned_cols=210 Identities=15% Similarity=0.118 Sum_probs=152.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||++++++|+++|++|++++|+.++.+.+.+++. .+...+.+|+.+...
T Consensus 2 slkGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~----------------~~~~~~~~~~~~~~~ 65 (248)
T d2o23a1 2 SVKGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLG----------------NNCVFAPADVTSEKD 65 (248)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHC----------------TTEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhC----------------CCccccccccccccc
Confidence 4678999999999999999999999999999999999988877665442 567888999998776
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------------ccCCCCCcccchHHHHHHHHHHHHhC----------CCCEE
Q 013273 157 IEPAL-------GNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIA----------KVNHF 207 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------------~~~~~~~~~~vNv~g~~~l~~aa~~~----------~v~r~ 207 (446)
++..+ ...|.++++++.... ...++...+++|+.++.++.+++... +.++|
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~~~~~~~~~G~I 145 (248)
T d2o23a1 66 VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVAGEMGQNEPDQGGQRGVI 145 (248)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSCCCTTSCCEEE
T ss_pred ccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhHHHHHHhhhhccCCceEE
Confidence 65544 567999998764221 11234556789999999999988542 34589
Q ss_pred EEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-ccccceeecccCccc
Q 013273 208 IMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KETHNITLSQEDTLF 279 (446)
Q Consensus 208 V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~~~~~~~~~~~~~~ 279 (446)
|++||...... ......|+.+|...+.+.+ .+|++++.|.||.+.++.... .....-.+.....+.
T Consensus 146 i~isS~~~~~~------~~~~~~Y~asKaal~~lt~~la~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~pl~ 219 (248)
T d2o23a1 146 INTASVAAFEG------QVGQAAYSASKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSLPEKVCNFLASQVPFP 219 (248)
T ss_dssp EEECCTHHHHC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC----------CHHHHTCSSS
T ss_pred EEecchhhccC------CCCchHHHHHHHHHHHHHHHHHHHhcccCcceeeeccCceecchhhcCCHHHHHHHHhcCCCC
Confidence 99999876432 1334579999999998876 379999999999998774221 111011111111223
Q ss_pred CCccCHHHHHHHHHHHHhCCCCCCCcEEEE
Q 013273 280 GGQVSNLQVAELLACMAKNRSLSYCKVVEV 309 (446)
Q Consensus 280 ~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni 309 (446)
+.+..++|||++++++++++- ..|++++|
T Consensus 220 ~R~g~peevA~~v~fL~s~~~-itGq~I~v 248 (248)
T d2o23a1 220 SRLGDPAEYAHLVQAIIENPF-LNGEVIRL 248 (248)
T ss_dssp CSCBCHHHHHHHHHHHHHCTT-CCSCEEEE
T ss_pred CCCcCHHHHHHHHHHHHhCCC-CCceEeEC
Confidence 557899999999999998653 56888775
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=99.84 E-value=5.7e-20 Score=177.24 Aligned_cols=219 Identities=14% Similarity=0.157 Sum_probs=155.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+|+||+++++.|+++|++|++++|+..+...+.+++... .+ .++.++.+|++|.++
T Consensus 22 ~l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~--------~g----~~~~~~~~D~~~~~~ 89 (294)
T d1w6ua_ 22 SFQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQ--------TG----NKVHAIQCDVRDPDM 89 (294)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------HS----SCEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHh--------cC----CceEEEEecccChHH
Confidence 467899999999999999999999999999999999998888777666543 12 578899999999998
Q ss_pred HHHHh-------cCCCEEEEcccCCCCcc------CCCCCcccchHHHHHHHHHHHH-----hCCCCEEEEEccccccCC
Q 013273 157 IEPAL-------GNASVVICCIGASEKEV------FDITGPYRIDFQATKNLVDAAT-----IAKVNHFIMVSSLGTNKF 218 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~~~------~~~~~~~~vNv~g~~~l~~aa~-----~~~v~r~V~vSS~~~~~~ 218 (446)
+++++ +++|++|||||...... .++...+.+|+.+...+...+. ..+...++.+||......
T Consensus 90 v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~i~~~ss~~~~~~ 169 (294)
T d1w6ua_ 90 VQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQLIKAQKGAAFLSITTIYAETG 169 (294)
T ss_dssp HHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECCTHHHHC
T ss_pred HHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcccccccccccccccccchhhhc
Confidence 87765 57899999999653322 2233446677777777665542 234446777777654222
Q ss_pred CCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-c-ccc-eeecccCcccCCccCHHHH
Q 013273 219 GFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-E-THN-ITLSQEDTLFGGQVSNLQV 288 (446)
Q Consensus 219 ~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~-~~~-~~~~~~~~~~~~~v~~~Dv 288 (446)
. .....|+.+|...+.+.+ .+|+++++|.||++.++..... . ... ..........+.+..++||
T Consensus 170 ~------~~~~~YsasKaal~~ltk~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedi 243 (294)
T d1w6ua_ 170 S------GFVVPSASAKAGVEAMSKSLAAEWGKYGMRFNVIQPGPIKTKGAFSRLDPTGTFEKEMIGRIPCGRLGTVEEL 243 (294)
T ss_dssp C------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC------CCTTSHHHHHHHTTCTTSSCBCHHHH
T ss_pred c------cccchHHHHHHHHHHHHHHHHHHHhHhCeEEEEEccCccccchhhhccCCcHHHHHHHhhcCCCCCCCCHHHH
Confidence 1 234569999999998876 3799999999999987642111 0 000 0011122334567899999
Q ss_pred HHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 289 AELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 289 A~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+++.+|+.+.. ...|+++.|-++.
T Consensus 244 A~~v~fL~sd~s~~itG~~i~vDGG~ 269 (294)
T d1w6ua_ 244 ANLAAFLCSDYASWINGAVIKFDGGE 269 (294)
T ss_dssp HHHHHHHTSGGGTTCCSCEEEESTTH
T ss_pred HHHHHHHhCchhcCCCCcEEEECCCh
Confidence 999999997643 3578899887773
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=4.5e-21 Score=180.58 Aligned_cols=214 Identities=15% Similarity=0.101 Sum_probs=157.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++++|++|||||+++||+++++.|+++|++|++++|++++++++.+ ..++....+|+.+.+.
T Consensus 3 ~l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~------------------~~~~~~~~~d~~~~~~ 64 (245)
T d2ag5a1 3 RLDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEK------------------YPGIQTRVLDVTKKKQ 64 (245)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGG------------------STTEEEEECCTTCHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh------------------ccCCceeeeecccccc
Confidence 3678999999999999999999999999999999999876544321 2568888999998776
Q ss_pred HHHHh---cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCchh
Q 013273 157 IEPAL---GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 157 ~~~a~---~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++..+ .++|++|||||.... +.+++...+++|+.++..+.+++. +.+.+++|++||......+
T Consensus 65 ~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g~Ii~isS~~~~~~~---- 140 (245)
T d2ag5a1 65 IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSGNIINMSSVASSVKG---- 140 (245)
T ss_dssp HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTTBC----
T ss_pred ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCceeeeeechhhccCC----
Confidence 66554 678999999996432 333456678899999999988774 3456699999987553222
Q ss_pred hhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccc------ceeecccCcccCCccCHHHHHH
Q 013273 224 ILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETH------NITLSQEDTLFGGQVSNLQVAE 290 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~------~~~~~~~~~~~~~~v~~~DvA~ 290 (446)
......|+.+|...+.+.+ .+|++++.|.||++.++........ ...........+.+..++|+|+
T Consensus 141 -~~~~~~Y~~sKaal~~l~r~lA~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~pl~R~~~pedva~ 219 (245)
T d2ag5a1 141 -VVNRCVYSTTKAAVIGLTKSVAADFIQQGIRCNCVCPGTVDTPSLQERIQARGNPEEARNDFLKRQKTGRFATAEEIAM 219 (245)
T ss_dssp -CTTBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESCEECHHHHHHHHHSSSHHHHHHHHHHTCTTSSCEEHHHHHH
T ss_pred -ccchhHHHHHHHHHHHHHHHHHHHhhhhCcEEEEEeeceeechhhHhhhhhhhhhHHHHHHHHhcCCCCCCcCHHHHHH
Confidence 1344579999999998876 3799999999999987642110000 0000111233456788999999
Q ss_pred HHHHHHhCCC-CCCCcEEEEecCC
Q 013273 291 LLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 291 ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
++.+|+.+.. ...|+++.|-++.
T Consensus 220 ~v~fL~s~~s~~iTG~~i~VDGG~ 243 (245)
T d2ag5a1 220 LCVYLASDESAYVTGNPVIIDGGW 243 (245)
T ss_dssp HHHHHHSGGGTTCCSCEEEECTTG
T ss_pred HHHHHhChhhCCCcCceEEeCCCc
Confidence 9999997643 3578888887763
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=99.83 E-value=1.8e-20 Score=176.65 Aligned_cols=164 Identities=16% Similarity=0.134 Sum_probs=125.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~---~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
||+||||||+++||+++++.|++ +|++|++.+|+.++.+.+.+..+. + .++.++.+|++|.++
T Consensus 2 MKtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~----------~----~~~~~~~~Dvs~~~~ 67 (248)
T d1snya_ 2 MNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN----------H----SNIHILEIDLRNFDA 67 (248)
T ss_dssp CSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH----------C----TTEEEEECCTTCGGG
T ss_pred cCEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhc----------C----CcEEEEEEEeccHHH
Confidence 57899999999999999999974 689999999999888776543332 1 689999999999988
Q ss_pred HHHHh---------cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh---------------CCCC
Q 013273 157 IEPAL---------GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI---------------AKVN 205 (446)
Q Consensus 157 ~~~a~---------~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~---------------~~v~ 205 (446)
+++++ +++|++|||||.... +..+++..+++|+.|+..+++++.. .+.+
T Consensus 68 v~~~~~~i~~~~~~~~iDiLvnNAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g 147 (248)
T d1snya_ 68 YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRA 147 (248)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTC
T ss_pred HHHHHhhhHHHhhcCCcceEEeeccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhcccccccccccc
Confidence 87664 458999999996322 1122445688999999999887732 1356
Q ss_pred EEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCC
Q 013273 206 HFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERP 260 (446)
Q Consensus 206 r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp 260 (446)
++|++||......+.+ ...+..|+.+|+....+.+ ..|++++.|.||++.++
T Consensus 148 ~ii~i~S~~g~~~~~~---~~~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~T~ 206 (248)
T d1snya_ 148 AIINMSSILGSIQGNT---DGGMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTD 206 (248)
T ss_dssp EEEEECCGGGCSTTCC---SCCCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCST
T ss_pred ccccccccccccCCCC---CCChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCcccCC
Confidence 9999999764322211 2335579999999887754 47999999999999876
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.1e-20 Score=179.91 Aligned_cols=215 Identities=13% Similarity=0.113 Sum_probs=148.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEE---EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRA---GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~---~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+|+||||||+++||+++++.|+++|++|+. ..|+.+....+.+..+... ....++.++.+|++|.++
T Consensus 2 kkVvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~Dv~~~~~ 71 (285)
T d1jtva_ 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALA----------CPPGSLETLQLDVRDSKS 71 (285)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTT----------CCTTSEEEEECCTTCHHH
T ss_pred CCEEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHh----------ccCCceEEEeccccchHh
Confidence 467899999999999999999999987544 4566555555554444331 123689999999999999
Q ss_pred HHHHh-----cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCc
Q 013273 157 IEPAL-----GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFP 221 (446)
Q Consensus 157 ~~~a~-----~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~ 221 (446)
+++++ +.+|++|||+|.... +.++++..+++|+.|+.++++++. +.+-++||++||..+....
T Consensus 72 ~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~~~~-- 149 (285)
T d1jtva_ 72 VAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGLMGL-- 149 (285)
T ss_dssp HHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGTSCC--
T ss_pred hhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhcCCC--
Confidence 98887 457999999986432 233456668899999999988773 4566799999998764322
Q ss_pred hhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcc-cccccceeecc----------------cCc
Q 013273 222 AAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDA-YKETHNITLSQ----------------EDT 277 (446)
Q Consensus 222 ~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~-~~~~~~~~~~~----------------~~~ 277 (446)
.....|+.+|+.++.+.+ .+|+++++|.||++.++... ......-.... ...
T Consensus 150 ----~~~~~Y~asKaal~~l~~~la~El~~~gIrVn~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (285)
T d1jtva_ 150 ----PFNDVYCASKFALEGLCESLAVLLLPFGVHLSLIECGPVHTAFMEKVLGSPEEVLDRTDIHTFHRFYQYLAHSKQV 225 (285)
T ss_dssp ----TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCC-------CCHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred ----CCchHHHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCCChHHHHhccCHHHHhhccchhHHHHHHHHHHHHhhh
Confidence 234579999999987764 37999999999999876311 10000000000 001
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
..+....++|||+++++++.++. .....+.+..
T Consensus 226 ~~~~~~~PeeVA~~v~~~~~~~~---p~~ry~~g~~ 258 (285)
T d1jtva_ 226 FREAAQNPEEVAEVFLTALRAPK---PTLRYFTTER 258 (285)
T ss_dssp HHHHCBCHHHHHHHHHHHHHCSS---CCSEEESCST
T ss_pred hcccCCCHHHHHHHHHHHHhCCC---CCeEEecHHH
Confidence 11235689999999999998765 2234455543
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=99.80 E-value=3.5e-19 Score=168.43 Aligned_cols=198 Identities=19% Similarity=0.181 Sum_probs=143.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchh---HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQR---AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~---~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+||||||+|+||+++++.|+++|+ +|+++.|+... ..++.++++.. | .++.++.+|++|.+
T Consensus 9 ~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~---------g----~~v~~~~~Dv~d~~ 75 (259)
T d2fr1a1 9 TGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEAL---------G----ARTTVAACDVTDRE 75 (259)
T ss_dssp CSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHT---------T----CEEEEEECCTTCHH
T ss_pred cCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhc---------c----ccccccccccchHH
Confidence 45999999999999999999999998 58888987533 44444444332 2 57999999999999
Q ss_pred cHHHHhc------CCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchh
Q 013273 156 QIEPALG------NASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAA 223 (446)
Q Consensus 156 ~~~~a~~------~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~ 223 (446)
++++++. ++|.||||+|..... ..++...+++|+.+..++.+++...+.++||++||.......
T Consensus 76 ~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~iv~~SS~a~~~g~---- 151 (259)
T d2fr1a1 76 SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRELDLTAFVLFSSFASAFGA---- 151 (259)
T ss_dssp HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTTSCCSEEEEEEEHHHHTCC----
T ss_pred HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhccCCceEeeecchhhccCC----
Confidence 9988873 479999999964332 222344578899999999999888888899999997663322
Q ss_pred hhchhhHHHHHHHHHHHHHH---hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhCCC
Q 013273 224 ILNLFWGVLLWKRKAEEALI---ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKNRS 300 (446)
Q Consensus 224 ~~~~~~~Y~~sK~~~E~~l~---~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~ 300 (446)
.....|+.+|...+.+.+ ..|++++.|.||.+.+++........ .+.. .-...+..+++++++..++.+..
T Consensus 152 --~~~~~YaAaka~l~~la~~~~~~Gi~v~~I~pg~~~~~g~~~~~~~~-~~~~---~G~~~~~~~~~~~~l~~~l~~~~ 225 (259)
T d2fr1a1 152 --PGLGGYAPGNAYLDGLAQQRRSDGLPATAVAWGTWAGSGMAEGPVAD-RFRR---HGVIEMPPETACRALQNALDRAE 225 (259)
T ss_dssp --TTCTTTHHHHHHHHHHHHHHHHTTCCCEEEEECCBC-------------CTT---TTEECBCHHHHHHHHHHHHHTTC
T ss_pred --cccHHHHHHHHhHHHHHHHHHhCCCCEEECCCCcccCCccccchHHH-HHHh---cCCCCCCHHHHHHHHHHHHhCCC
Confidence 224469999999887654 58999999999998876432111000 0111 01135899999999999998765
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=3.5e-19 Score=170.21 Aligned_cols=191 Identities=18% Similarity=0.112 Sum_probs=141.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++++|||||+++||+++++.|+++ |++|++.+|+.++.+++.++++.. + .++.++.+|++|.++++
T Consensus 3 ~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~---------~----~~~~~~~~Dvs~~~sv~ 69 (275)
T d1wmaa1 3 IHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAE---------G----LSPRFHQLDIDDLQSIR 69 (275)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHT---------T----CCCEEEECCTTCHHHHH
T ss_pred CeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhc---------C----CcEEEEEEecCCHHHHH
Confidence 356699999999999999999986 899999999999998888877653 2 57899999999999887
Q ss_pred HHh-------cCCCEEEEcccCCCCc------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCC---CC
Q 013273 159 PAL-------GNASVVICCIGASEKE------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKF---GF 220 (446)
Q Consensus 159 ~a~-------~~~D~VI~~Ag~~~~~------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~---~~ 220 (446)
+++ +++|++|||||..... ..+++..+++|+.|+.++++++... .-+|+|++||...... ..
T Consensus 70 ~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~~~~~~~~~~ 149 (275)
T d1wmaa1 70 ALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIMSVRALKSCS 149 (275)
T ss_dssp HHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHHHHHHHHTSC
T ss_pred HHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccceeccccccc
Confidence 765 5789999999964321 1234456889999999999999653 2358999999643110 00
Q ss_pred c--------------------------------hhhhchhhHHHHHHHHHHHHHH-------h----CCCCEEEEecCCc
Q 013273 221 P--------------------------------AAILNLFWGVLLWKRKAEEALI-------A----SGLPYTIVRPGGM 257 (446)
Q Consensus 221 ~--------------------------------~~~~~~~~~Y~~sK~~~E~~l~-------~----~gl~~tivRPg~v 257 (446)
+ .....+...|+.+|+....+.+ . .|++++.|.||+|
T Consensus 150 ~y~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aY~~sK~a~~~~t~~la~~l~~~~~~~~I~vn~v~PG~v 229 (275)
T d1wmaa1 150 PELQQKFRSETITEEELVGLMNKFVEDTKKGVHQKEGWPSSAYGVTKIGVTVLSRIHARKLSEQRKGDKILLNACCPGWV 229 (275)
T ss_dssp HHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTTTTCCSCHHHHHHHHHHHHHHHHHHHHHHHCTTSCCEEEEEECCSB
T ss_pred hhhhhhhcccccchhhhccccccchhcccccccccCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEEecccc
Confidence 0 0011223469999998775542 1 4899999999999
Q ss_pred cCCCcccccccceeecccCcccCCccCHHHHHHHHHHHHhC
Q 013273 258 ERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMAKN 298 (446)
Q Consensus 258 ~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~ 298 (446)
.++... .....+++|+|+.+++++..
T Consensus 230 ~T~m~~---------------~~~~~~pee~A~~~~~~a~~ 255 (275)
T d1wmaa1 230 RTDMAG---------------PKATKSPEEGAETPVYLALL 255 (275)
T ss_dssp CSTTTC---------------TTCSBCHHHHTHHHHHHHSC
T ss_pred cCCccc---------------CcccCCHHHHHHHHHHHHcC
Confidence 866211 01234789999999988753
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=99.79 E-value=7.5e-19 Score=165.53 Aligned_cols=199 Identities=14% Similarity=0.041 Sum_probs=136.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.+|+||||||+++||++++++|+++|+ .|++.+|+.++++++.+ ....++.++.+|++|.++
T Consensus 2 ~~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~----------------~~~~~~~~~~~Dvs~~~~ 65 (250)
T d1yo6a1 2 SPGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKS----------------IKDSRVHVLPLTVTCDKS 65 (250)
T ss_dssp CCSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHT----------------CCCTTEEEEECCTTCHHH
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHH----------------hhCCceEEEEEecCCHHH
Confidence 458999999999999999999999995 68889999988766532 112679999999999988
Q ss_pred HHHHh-------c--CCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHh----C-----------CCC
Q 013273 157 IEPAL-------G--NASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATI----A-----------KVN 205 (446)
Q Consensus 157 ~~~a~-------~--~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~----~-----------~v~ 205 (446)
+++++ + ++|+||||||.... +..+++..+++|+.|+.++++++.. . ...
T Consensus 66 v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~l~~~~~~~~~~~~~~~~~ 145 (250)
T d1yo6a1 66 LDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKLLPLLKNAASKESGDQLSVSRA 145 (250)
T ss_dssp HHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHSSCSSCCCTTTC
T ss_pred HHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccccceec
Confidence 87765 2 48999999996421 1122445688999999999887642 1 135
Q ss_pred EEEEEccccccCCC-CchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeecccCc
Q 013273 206 HFIMVSSLGTNKFG-FPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDT 277 (446)
Q Consensus 206 r~V~vSS~~~~~~~-~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~ 277 (446)
++|++|+....... .......+...|+.+|+....+.+ ..|++++.|.||+|-++-..
T Consensus 146 ~~i~~s~~~~~~~~~~~~~~~~~~~aY~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v~T~m~~-------------- 211 (250)
T d1yo6a1 146 AVITISSGLGSITDNTSGSAQFPVLAYRMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLGG-------------- 211 (250)
T ss_dssp EEEEECCGGGCSTTCCSTTSSSCBHHHHHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC--------------------
T ss_pred cccccccccccccCCcccccchhHHHHHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCCCCCCC--------------
Confidence 78888875442211 111122345579999999887765 47899999999999765210
Q ss_pred ccCCccCHHHHHHHHHHHHhCCCC-CCCcEEE
Q 013273 278 LFGGQVSNLQVAELLACMAKNRSL-SYCKVVE 308 (446)
Q Consensus 278 ~~~~~v~~~DvA~ai~~ll~~~~~-~~~~v~n 308 (446)
....+++++.++.++..+..... ..|+.|+
T Consensus 212 -~~~~~~~e~~a~~~~~~~~~~~~~~sG~f~~ 242 (250)
T d1yo6a1 212 -KNAALTVEQSTAELISSFNKLDNSHNGRFFM 242 (250)
T ss_dssp --------HHHHHHHHHHHTTCCGGGTTCEEE
T ss_pred -CCCCCCHHHHHHHHHHHHhcCCCCCCeEEEC
Confidence 11246789999999988876442 2355554
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.79 E-value=1.1e-18 Score=166.12 Aligned_cols=198 Identities=15% Similarity=0.120 Sum_probs=146.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|++|||||+++||+++++.|+++|++|++++|+.++++++.+++... . ...+.++.+|+.+...
T Consensus 11 ~L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~--------~----~~~~~~~~~d~~~~~~ 78 (269)
T d1xu9a_ 11 MLQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLEL--------G----AASAHYIAGTMEDMTF 78 (269)
T ss_dssp GGTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHH--------T----CSEEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhh--------h----cccchhhhhhhhhHHH
Confidence 478899999999999999999999999999999999999988877665543 1 2578889999998776
Q ss_pred HHHHh-------cCCCEEEEcccCCCC------ccCCCCCcccchHHHHHHHHHHHHh---CCCCEEEEEccccccCCCC
Q 013273 157 IEPAL-------GNASVVICCIGASEK------EVFDITGPYRIDFQATKNLVDAATI---AKVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 157 ~~~a~-------~~~D~VI~~Ag~~~~------~~~~~~~~~~vNv~g~~~l~~aa~~---~~v~r~V~vSS~~~~~~~~ 220 (446)
+...+ +.+|++|||||.... +.+++...+++|+.++..+.+++.. .+-+++|++||.++....
T Consensus 79 ~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~~~~- 157 (269)
T d1xu9a_ 79 AEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGKVAY- 157 (269)
T ss_dssp HHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGTSCC-
T ss_pred HHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhcCCC-
Confidence 65543 678999999986432 2223445688999999888887742 233699999998764332
Q ss_pred chhhhchhhHHHHHHHHHHHHHH---------hCCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALI---------ASGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~---------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|+.++.+.+ ..|++++.|.||.|.++.... .. ........+..+++|+.
T Consensus 158 -----p~~~~Y~asKaal~~~~~~La~El~~~~~~I~V~~v~PG~v~T~~~~~------~~--~~~~~~~~~~~e~~a~~ 224 (269)
T d1xu9a_ 158 -----PMVAAYSASKFALDGFFSSIRKEYSVSRVNVSITLCVLGLIDTETAMK------AV--SGIVHMQAAPKEECALE 224 (269)
T ss_dssp -----TTCHHHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEECCBCCHHHHH------HS--CGGGGGGCBCHHHHHHH
T ss_pred -----CCchHHHHHHHHHHHHHHHHHHHhhhcCCCEEEEEEecCcCCCcHHHH------hc--cCCccccCCCHHHHHHH
Confidence 335679999999887654 246899999999998752110 00 01112234778999999
Q ss_pred HHHHHhCCC
Q 013273 292 LACMAKNRS 300 (446)
Q Consensus 292 i~~ll~~~~ 300 (446)
++..+....
T Consensus 225 i~~~~~~~~ 233 (269)
T d1xu9a_ 225 IIKGGALRQ 233 (269)
T ss_dssp HHHHHHTTC
T ss_pred HHHHhhcCC
Confidence 998776554
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=99.77 E-value=6.3e-19 Score=164.70 Aligned_cols=197 Identities=13% Similarity=0.091 Sum_probs=141.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|+||||||+|+||+++++.|+++|++|++++|+..... ....++.+|..+.++.+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~ 57 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA-----------------------SASVIVKMTDSFTEQAD 57 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS-----------------------SEEEECCCCSCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccccc-----------------------cccceeecccCcHHHHH
Confidence 4689999999999999999999999999999998764311 23445566666554444
Q ss_pred HH-------h--cCCCEEEEcccCCCC-------ccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCC
Q 013273 159 PA-------L--GNASVVICCIGASEK-------EVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGF 220 (446)
Q Consensus 159 ~a-------~--~~~D~VI~~Ag~~~~-------~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~ 220 (446)
.+ + .++|++|||||.... ..++++..+++|+.++.++.+++..+ +.++||++||.......
T Consensus 58 ~~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~- 136 (236)
T d1dhra_ 58 QVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGT- 136 (236)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC-
T ss_pred HHHHHHHHHhCCCCceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCc-
Confidence 32 2 258999999984211 11234556889999999999988753 33699999998764322
Q ss_pred chhhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHH
Q 013273 221 PAAILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAEL 291 (446)
Q Consensus 221 ~~~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~a 291 (446)
.....|+.+|..++.+.+. .|++++.|.||++.++..... .....+..++.++|+|+.
T Consensus 137 -----~~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~pe~va~~ 203 (236)
T d1dhra_ 137 -----PGMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTPMNRKS--------MPEADFSSWTPLEFLVET 203 (236)
T ss_dssp -----TTBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECHHHHHH--------STTSCGGGSEEHHHHHHH
T ss_pred -----cCCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCCcchhh--------CccchhhcCCCHHHHHHH
Confidence 2345799999999988762 479999999999987632110 011123456889999999
Q ss_pred HHHHHhCCC-CCCCcEEEEecC
Q 013273 292 LACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 292 i~~ll~~~~-~~~~~v~ni~~~ 312 (446)
+++++.... ...|+++.|...
T Consensus 204 ~~~l~s~~~~~i~G~~i~v~~~ 225 (236)
T d1dhra_ 204 FHDWITGNKRPNSGSLIQVVTT 225 (236)
T ss_dssp HHHHHTTTTCCCTTCEEEEEEE
T ss_pred HHHHhCCCccCCCCCeEEEEEE
Confidence 999998654 246777777543
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=99.76 E-value=4.1e-18 Score=160.68 Aligned_cols=216 Identities=13% Similarity=0.099 Sum_probs=150.1
Q ss_pred CCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+++|+||||||+| +||+++++.|+++|++|++.+|++.....+.+..... ....++..|+.+..
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~ 68 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQL--------------GSDIVLQCDVAEDA 68 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHT--------------TCCCEEECCTTCHH
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhc--------------CCcceeecccchHH
Confidence 5789999999999 8999999999999999999999876555443332221 56778889999987
Q ss_pred cHHHHh-------cCCCEEEEcccCCCCccCC-----------CCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccc
Q 013273 156 QIEPAL-------GNASVVICCIGASEKEVFD-----------ITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGT 215 (446)
Q Consensus 156 ~~~~a~-------~~~D~VI~~Ag~~~~~~~~-----------~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~ 215 (446)
++...+ ...|++|||++.......+ +...+.+|+.+...+.+++... +.+.+|++||.+.
T Consensus 69 ~~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ii~iss~~~ 148 (258)
T d1qsga_ 69 SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLNPGSALLTLSYLGA 148 (258)
T ss_dssp HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred HHHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHHhccCCcEEEEecchhh
Confidence 766655 4579999999864322211 1222345666666677766543 3347889998776
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccccccee--ecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNIT--LSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~--~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|...+.+.+ .+|++++.|+||.+.++........... ........+.+..++
T Consensus 149 ~~~~------~~~~~Y~~sKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~pl~R~~~pe 222 (258)
T d1qsga_ 149 ERAI------PNYNVMGLAKASLEANVRYMANAMGPEGVRVNAISAGPIRTLAASGIKDFRKMLAHCEAVTPIRRTVTIE 222 (258)
T ss_dssp TSBC------TTTTHHHHHHHHHHHHHHHHHHHHTTTTEEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred ccCC------CCcHHHHHHHHHHHHHHHHHHHHhCccCceeecccccccccccccccchhhhHHHHHHhCCCCCCCcCHH
Confidence 4322 223569999999998876 3789999999999988743211100000 011122345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|+|+++++|+.+.. ...|+++.+-++-
T Consensus 223 eia~~v~fL~s~~s~~itG~~i~vDGG~ 250 (258)
T d1qsga_ 223 DVGNSAAFLCSDLSAGISGEVVHVDGGF 250 (258)
T ss_dssp HHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhCchhcCccCceEEECcCH
Confidence 99999999997643 3578888887764
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=99.75 E-value=2e-17 Score=157.91 Aligned_cols=227 Identities=13% Similarity=0.018 Sum_probs=142.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC-chhHHHHHHHHHHhhhcccc----cc-cCCCCCCceEEEEcCCCC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS-VQRAENLVQSVKQMKLDGEL----AN-KGIQPVEMLELVECDLEK 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~-~~~~~~l~~~~~~~~l~~~~----~~-~g~~~~~~v~~v~~Dl~d 153 (446)
++++|||||+++||+++++.|+++|++|++.+|+ .+..+.+.+++....-.... |. ........+....+|+++
T Consensus 2 ~pVAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~dv~~ 81 (284)
T d1e7wa_ 2 VPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVATAPVSGADGSAPVTL 81 (284)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSCBCCCC----CCCBCH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHHHHHHhhcCCceEEEEeecccccccccccccccccCCC
Confidence 4689999999999999999999999999998775 45566666666543100000 00 000001123334566888
Q ss_pred hhcHHHHh-------cCCCEEEEcccCCCCc------cCCCCC--------------cccchHHHHHHHHHHHHh-----
Q 013273 154 RVQIEPAL-------GNASVVICCIGASEKE------VFDITG--------------PYRIDFQATKNLVDAATI----- 201 (446)
Q Consensus 154 ~~~~~~a~-------~~~D~VI~~Ag~~~~~------~~~~~~--------------~~~vNv~g~~~l~~aa~~----- 201 (446)
.+++++++ +++|++|||||..... ..+++. .+.+|+.+...+.+++.+
T Consensus 82 ~~~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 161 (284)
T d1e7wa_ 82 FTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGT 161 (284)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHhCCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhh
Confidence 77777765 6899999999964321 111211 356788888888877643
Q ss_pred -----CCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc
Q 013273 202 -----AKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN 269 (446)
Q Consensus 202 -----~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~ 269 (446)
.+..++|+++|....... .....|+.+|..++.+.+ .+|++++.|.||++....+..... .
T Consensus 162 ~~~~~~~~~~ii~~~s~~~~~~~------~~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~I~PG~t~~~~~~~~~~-~ 234 (284)
T d1e7wa_ 162 PAKHRGTNYSIINMVDAMTNQPL------LGYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVDDMPPAV-W 234 (284)
T ss_dssp CGGGSCSCEEEEEECCTTTTSCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGGGSCHHH-H
T ss_pred HHHhcCCCCcccccccccccCCc------cceeeeccccccchhhhHHHHHHhCCccccccccccccccccccCCHHH-H
Confidence 133478888887653322 234579999999998876 379999999999754322111000 0
Q ss_pred eeecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 270 ITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 270 ~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
-.....-.+.+.+..++|||+++++|+.+.. ...|+++.|-|+.
T Consensus 235 ~~~~~~~pl~~R~~~peeiA~~v~fL~S~~s~~itG~~i~VDGG~ 279 (284)
T d1e7wa_ 235 EGHRSKVPLYQRDSSAAEVSDVVIFLCSSKAKYITGTCVKVDGGY 279 (284)
T ss_dssp HHHHTTCTTTTSCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCeEEECcCh
Confidence 0011111223567899999999999997643 3578889887774
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=99.75 E-value=4e-18 Score=158.75 Aligned_cols=202 Identities=16% Similarity=0.111 Sum_probs=142.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.|++|||||+++||+++++.|+++|++|++.+|+.+. .+...+++|+.+...+..
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~-------------------------~~~~~~~~d~~~~~~~~~ 55 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG-------------------------EDLIYVEGDVTREEDVRR 55 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS-------------------------SSSEEEECCTTCHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc-------------------------ccceEeeccccchhhhHH
Confidence 3789999999999999999999999999999998642 457788999998776666
Q ss_pred Hh------cCCCEEEEcccCCCC----------ccCCCCCcccchHHHHHHHHHHHHh----------CCCCEEEEEccc
Q 013273 160 AL------GNASVVICCIGASEK----------EVFDITGPYRIDFQATKNLVDAATI----------AKVNHFIMVSSL 213 (446)
Q Consensus 160 a~------~~~D~VI~~Ag~~~~----------~~~~~~~~~~vNv~g~~~l~~aa~~----------~~v~r~V~vSS~ 213 (446)
+. ...+.++++++.... ....++..+++|+.+..++++.+.. .+.++||++||.
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~ 135 (241)
T d1uaya_ 56 AVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASV 135 (241)
T ss_dssp HHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCT
T ss_pred HHHhhhccccccchhhhhhccccccccccccchhHHHHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecch
Confidence 54 344666666553211 1112334567888888888776632 234699999998
Q ss_pred cccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccccc-ccceeecccCcccCCccCH
Q 013273 214 GTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKE-THNITLSQEDTLFGGQVSN 285 (446)
Q Consensus 214 ~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~-~~~~~~~~~~~~~~~~v~~ 285 (446)
...... .....|+.+|+.++.+.+ .+|++++.|.||++.++...... .....+.....+.+.+..+
T Consensus 136 ~~~~~~------~~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~~~~~~~~~~~~~~~~~~~R~g~p 209 (241)
T d1uaya_ 136 AAFEGQ------IGQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQGLPEKAKASLAAQVPFPPRLGRP 209 (241)
T ss_dssp HHHHCC------TTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHTSCHHHHHHHHTTCCSSCSCCCH
T ss_pred hhccCC------CCchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccchhhhhHHHHHHhcCCCCCCCcCH
Confidence 663321 234579999999998876 37999999999999876321110 0000111122223557799
Q ss_pred HHHHHHHHHHHhCCCCCCCcEEEEecCC
Q 013273 286 LQVAELLACMAKNRSLSYCKVVEVIAET 313 (446)
Q Consensus 286 ~DvA~ai~~ll~~~~~~~~~v~ni~~~~ 313 (446)
+|||+++++|+.+. ...|+++.|-|+-
T Consensus 210 edvA~~v~fL~s~~-~iTG~~i~VDGG~ 236 (241)
T d1uaya_ 210 EEYAALVLHILENP-MLNGEVVRLDGAL 236 (241)
T ss_dssp HHHHHHHHHHHHCT-TCCSCEEEESTTC
T ss_pred HHHHHHHHHHHhCC-CCCCCEEEECCcc
Confidence 99999999999864 4678999887764
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.75 E-value=2.2e-18 Score=160.82 Aligned_cols=196 Identities=14% Similarity=0.081 Sum_probs=138.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
.+||||||+|+||+++++.|+++|++|++++|++.... .....+.+|+.+.+.....
T Consensus 3 gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~ 59 (235)
T d1ooea_ 3 GKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA-----------------------DSNILVDGNKNWTEQEQSI 59 (235)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS-----------------------SEEEECCTTSCHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhcc-----------------------cccceeccccCchhHHHHH
Confidence 47999999999999999999999999999999875311 2344556777654443322
Q ss_pred -------h--cCCCEEEEcccCCCC-c------cCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCch
Q 013273 161 -------L--GNASVVICCIGASEK-E------VFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPA 222 (446)
Q Consensus 161 -------~--~~~D~VI~~Ag~~~~-~------~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~ 222 (446)
+ +++|+||||||.... . ..+++..+++|+.++.++++++..+ +.+++|++||.......
T Consensus 60 ~~~~~~~~~~g~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~--- 136 (235)
T d1ooea_ 60 LEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPT--- 136 (235)
T ss_dssp HHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCC---
T ss_pred HHHHHHHhcCCCeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCc---
Confidence 2 568999999995321 1 1224455889999999999988654 23589999998664432
Q ss_pred hhhchhhHHHHHHHHHHHHHHh---------CCCCEEEEecCCccCCCcccccccceeecccCcccCCccCHHHHHHHHH
Q 013273 223 AILNLFWGVLLWKRKAEEALIA---------SGLPYTIVRPGGMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLA 293 (446)
Q Consensus 223 ~~~~~~~~Y~~sK~~~E~~l~~---------~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~ 293 (446)
..+..|+.+|+.++.+.+. .+++++.|.||++..+.... .+ .+..+..++..+|+++.++
T Consensus 137 ---~~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T~~~~~------~~--~~~~~~~~~~~~~va~~~~ 205 (235)
T d1ooea_ 137 ---PSMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDTPMNRK------WM--PNADHSSWTPLSFISEHLL 205 (235)
T ss_dssp ---TTBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCCHHHHH------HS--TTCCGGGCBCHHHHHHHHH
T ss_pred ---ccccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcCcchhh------hC--cCCccccCCCHHHHHHHHH
Confidence 3356799999999988762 46789999999998763210 01 1122345789999999998
Q ss_pred HHHhCCC--CCCCcEEEEecCC
Q 013273 294 CMAKNRS--LSYCKVVEVIAET 313 (446)
Q Consensus 294 ~ll~~~~--~~~~~v~ni~~~~ 313 (446)
.++.++. ...|..+.|..++
T Consensus 206 ~~l~~~~~~~~tG~~i~v~~~~ 227 (235)
T d1ooea_ 206 KWTTETSSRPSSGALLKITTEN 227 (235)
T ss_dssp HHHHCGGGCCCTTCEEEEEEET
T ss_pred HHhcCccccCCCceEEEEEeeC
Confidence 7776543 2457777775543
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=99.73 E-value=5.9e-17 Score=154.00 Aligned_cols=217 Identities=12% Similarity=0.084 Sum_probs=140.2
Q ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++++|++|||||+| +||+++++.|+++|++|++++|++.....+ +++.+. + ....++.+|+++.
T Consensus 2 ~L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~-~~l~~~---------~----~~~~~~~~d~~~~ 67 (274)
T d2pd4a1 2 FLKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRV-RPIAQE---------L----NSPYVYELDVSKE 67 (274)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHH-HHHHHH---------T----TCCCEEECCTTCH
T ss_pred cCCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHhh---------C----CceeEeeecccch
Confidence 36789999999887 899999999999999999999986533332 333322 2 5677889999998
Q ss_pred hcHHHHh-------cCCCEEEEcccCCCCcc--CC----CCCcccch----HHHHHHHHHHHHhC-CCC-EEEEEccccc
Q 013273 155 VQIEPAL-------GNASVVICCIGASEKEV--FD----ITGPYRID----FQATKNLVDAATIA-KVN-HFIMVSSLGT 215 (446)
Q Consensus 155 ~~~~~a~-------~~~D~VI~~Ag~~~~~~--~~----~~~~~~vN----v~g~~~l~~aa~~~-~v~-r~V~vSS~~~ 215 (446)
+++++++ +.+|++|||+|...... .+ ....+..+ ......+.....+. +.. .++.+|+.+.
T Consensus 68 ~~~~~~~~~~~~~~g~id~lV~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~ 147 (274)
T d2pd4a1 68 EHFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTLKPLLNNGASVLTLSYLGS 147 (274)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGG
T ss_pred hhHHHHHHHHHHHcCCCCeEEeecccccccccccccccccchhhhhhhccccccccccccccccccccCcceeeeccccc
Confidence 8877765 67899999999643211 11 11111111 12222333333222 222 4555555554
Q ss_pred cCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccc--eeecccCcccCCccCHH
Q 013273 216 NKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHN--ITLSQEDTLFGGQVSNL 286 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~--~~~~~~~~~~~~~v~~~ 286 (446)
.... .....|+.+|...+.+.+ .+|+++++|.||.+..+......... ..........+.++.++
T Consensus 148 ~~~~------~~~~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~p~~r~~~pe 221 (274)
T d2pd4a1 148 TKYM------AHYNVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASSGIADFRMILKWNEINAPLRKNVSLE 221 (274)
T ss_dssp TSBC------TTCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGGGSTTHHHHHHHHHHHSTTSSCCCHH
T ss_pred cccc------ccchhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCccccccCchHHHHHHHhhhhhccCCcCHH
Confidence 3221 233469999999988876 38999999999999887432211100 00111123345678999
Q ss_pred HHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 287 QVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 287 DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
|||+++++|+.+.. ...|+++.+-++-
T Consensus 222 dIA~~v~fL~S~~s~~itG~~i~vDGG~ 249 (274)
T d2pd4a1 222 EVGNAGMYLLSSLSSGVSGEVHFVDAGY 249 (274)
T ss_dssp HHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHHHhChhhCCCcCceEEECCCh
Confidence 99999999998643 3578899887774
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=99.71 E-value=5.2e-16 Score=146.31 Aligned_cols=213 Identities=18% Similarity=0.168 Sum_probs=135.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh-HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc---
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR-AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ--- 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~-~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~--- 156 (446)
+++|||||+++||+++++.|+++|++|++++|+.++ .+.+.+++... ......++..|+.+..+
T Consensus 2 ~vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~ 69 (266)
T d1mxha_ 2 PAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAA------------RAGSAVLCKGDLSLSSSLLD 69 (266)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHH------------STTCEEEEECCCSSSTTHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhh------------cCCceEEEecccccchhHHH
Confidence 479999999999999999999999999999998654 45555555443 12567777777765332
Q ss_pred -HHH-------HhcCCCEEEEcccCCCCccC------CCCC-----------cccchHHHHHHHHHHHHh---------C
Q 013273 157 -IEP-------ALGNASVVICCIGASEKEVF------DITG-----------PYRIDFQATKNLVDAATI---------A 202 (446)
Q Consensus 157 -~~~-------a~~~~D~VI~~Ag~~~~~~~------~~~~-----------~~~vNv~g~~~l~~aa~~---------~ 202 (446)
+.+ .++++|++|||||....... .... .+..|+.+.......... .
T Consensus 70 ~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (266)
T d1mxha_ 70 CCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVAPLFLIRAFARRQGEGGAWRS 149 (266)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHHHHHHHHHHHHTC-------C
T ss_pred HHHHHHHHHHHHhCCCCEEEECCccCCCCcccccccccchhcccccccccccccccccccccchhhhhcccccccccccc
Confidence 222 34689999999996432111 1111 122233333333333322 1
Q ss_pred CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccccccceeeccc
Q 013273 203 KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYKETHNITLSQE 275 (446)
Q Consensus 203 ~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~~~~~~~~~~~ 275 (446)
....++.+|+...... ......|+.+|...+.+.+ .+|++++.|.||++..+.......... + ..
T Consensus 150 ~~~~~~~~~~~~~~~~------~~~~~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~~~~~~~~~-~-~~ 221 (266)
T d1mxha_ 150 RNLSVVNLCDAMTDLP------LPGFCVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPAMPQETQEE-Y-RR 221 (266)
T ss_dssp CCEEEEEECCGGGGSC------CTTCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSSSCHHHHHH-H-HT
T ss_pred ccccchhhhhcccccc------CcchhhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEeccccCCHHHHHH-H-Hh
Confidence 2336667776655332 1345679999999998866 379999999999998764321111110 1 11
Q ss_pred CcccCC-ccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 276 DTLFGG-QVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 276 ~~~~~~-~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
....+. +..++|||+++++|+.+.. ...|+++.|-++-
T Consensus 222 ~~pl~r~~~~peeva~~v~fL~s~~s~~itG~~i~vDGG~ 261 (266)
T d1mxha_ 222 KVPLGQSEASAAQIADAIAFLVSKDAGYITGTTLKVDGGL 261 (266)
T ss_dssp TCTTTSCCBCHHHHHHHHHHHHSGGGTTCCSCEEEESTTG
T ss_pred cCCCCCCCCCHHHHHHHHHHHhCchhCCccCCeEEECccH
Confidence 112222 4689999999999998653 3578899887763
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=99.65 E-value=5e-16 Score=148.99 Aligned_cols=231 Identities=10% Similarity=0.033 Sum_probs=140.6
Q ss_pred CCCCCEEEEECCCc--HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCC--CceEEEEcCCC
Q 013273 77 SKDDNLAFVAGATG--KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPV--EMLELVECDLE 152 (446)
Q Consensus 77 ~~~~~~VlVtGatG--~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~--~~v~~v~~Dl~ 152 (446)
.+++|++|||||+| +||+++++.|+++|++|++.+|+......... .+....+........... .++..+..++.
T Consensus 5 ~L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (297)
T d1d7oa_ 5 DLRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPALNIFETS-LRRGKFDQSRVLPDGSLMEIKKVYPLDAVFD 83 (297)
T ss_dssp CCTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHH-HHTTTTTGGGBCTTSSBCCEEEEEEECTTCC
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchhhhhhHHH-HHHhhhhhhhhhhhhhhhhhhhhhhhhhhcc
Confidence 46789999999887 99999999999999999999997654333222 111111110000000000 12222222222
Q ss_pred ------------------ChhcH-------HHHhcCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHH
Q 013273 153 ------------------KRVQI-------EPALGNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAA 199 (446)
Q Consensus 153 ------------------d~~~~-------~~a~~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa 199 (446)
+...+ .+.++++|++|||||.... +.+++...+++|+.+..++++++
T Consensus 84 ~~~~~~~dv~~~~~~~~~~~~~~~~~~~~~~~~~G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~ 163 (297)
T d1d7oa_ 84 NPEDVPEDVKANKRYAGSSNWTVQEAAECVRQDFGSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHF 163 (297)
T ss_dssp SGGGSCHHHHTSHHHHHCCCCSHHHHHHHHHHHHSCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ccccchhhhhhhhhhhhccHHHHHHHHHHHHHHhCCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHH
Confidence 22222 2334789999999986321 22234566789999999999988
Q ss_pred HhC--CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH--------hCCCCEEEEecCCccCCCcccccc--
Q 013273 200 TIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYKET-- 267 (446)
Q Consensus 200 ~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tivRPg~v~gp~~~~~~~-- 267 (446)
... .-++++.+++.+...... .....|..+|...+.+.+ .+|++++.|+||++.++.......
T Consensus 164 ~~~~~~~g~~~~~~~~~~~~~~~-----~~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~~~~~~~ 238 (297)
T d1d7oa_ 164 LPIMNPGGASISLTYIASERIIP-----GYGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKAIGFID 238 (297)
T ss_dssp GGGEEEEEEEEEEECGGGTSCCT-----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSCCSHHH
T ss_pred HHHhhcCCcceeeeehhhccccc-----ccccceecccccccccccccchhccccceEEecccccccccchhhhhccCCH
Confidence 654 223556666654432221 223459999988776654 369999999999998874321100
Q ss_pred cceeecccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCC
Q 013273 268 HNITLSQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAET 313 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~ 313 (446)
............+.+..++|||+++++|+.+.. ...|+++.|-++-
T Consensus 239 ~~~~~~~~~~PlgR~~~peevA~~v~fL~S~~a~~itGq~i~vDGG~ 285 (297)
T d1d7oa_ 239 TMIEYSYNNAPIQKTLTADEVGNAAAFLVSPLASAITGATIYVDNGL 285 (297)
T ss_dssp HHHHHHHHHSSSCCCBCHHHHHHHHHHHTSGGGTTCCSCEEEESTTG
T ss_pred HHHHHHHhCCCCCCCCCHHHHHHHHHHHhCchhcCCcCceEEECcCH
Confidence 000011112234567899999999999997543 3478888887663
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=99.65 E-value=5.6e-16 Score=146.43 Aligned_cols=217 Identities=11% Similarity=0.041 Sum_probs=136.9
Q ss_pred CCCCCEEEEECCC--cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGAT--GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGat--G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++++|+||||||+ .+||+++++.|+++|++|++.+|+..+..+ .+.+. ...+...+++|+.+.
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~---~~~~~------------~~~~~~~~~~dv~~~ 67 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQ---RITDR------------LPAKAPLLELDVQNE 67 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHH---HHHTT------------SSSCCCEEECCTTCH
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHH---HHHHH------------cCCceeeEeeecccc
Confidence 4678999999965 479999999999999999999998866432 11111 125678889999998
Q ss_pred hcHHHHh----------cCCCEEEEcccCCCCccCCCCCc-----------ccchHHHHHHHHHHHHhC-CCCEEEEEcc
Q 013273 155 VQIEPAL----------GNASVVICCIGASEKEVFDITGP-----------YRIDFQATKNLVDAATIA-KVNHFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~----------~~~D~VI~~Ag~~~~~~~~~~~~-----------~~vNv~g~~~l~~aa~~~-~v~r~V~vSS 212 (446)
++++.++ +.+|++|||+|............ +.+|......+.+.+... +...+|+++|
T Consensus 68 ~~~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 147 (268)
T d2h7ma1 68 EHLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKALLPIMNPGGSIVGMD 147 (268)
T ss_dssp HHHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEE
T ss_pred cccccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHHHhhhccccccccccc
Confidence 7665553 34799999999653322221111 233444444444444332 1223444444
Q ss_pred ccccCCCCchhhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCccc-cc-cc--------cee---e
Q 013273 213 LGTNKFGFPAAILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAY-KE-TH--------NIT---L 272 (446)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~-~~-~~--------~~~---~ 272 (446)
.+..... ..+..|+.+|...+.+.+ ..|++++.|.||.+.++.... .. .. ... .
T Consensus 148 ~~~~~~~------p~~~~y~~sK~a~~~ltr~lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (268)
T d2h7ma1 148 FDPSRAM------PAYNWMTVAKSALESVNRFVAREAGKYGVRSNLVAAGPIRTLAMSAIVGGALGEEAGAQIQLLEEGW 221 (268)
T ss_dssp CCCSSCC------TTTHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCHHHHHHHTTTTCHHHHHHHHHHHHHH
T ss_pred ccccccC------cccchhhccccchhhccccchhhhhccCCcceEEecCCCCChhhhhhccchhhhhhccchHHHHHHH
Confidence 4332221 234579999999998876 379999999999997652110 00 00 000 0
Q ss_pred cccCcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecCCC
Q 013273 273 SQEDTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAETT 314 (446)
Q Consensus 273 ~~~~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~~~ 314 (446)
.....+...+..++|+|+++++|+.+.. ...|+++.|-++..
T Consensus 222 ~~~~pl~rr~~~p~dva~~v~fL~Sd~a~~iTG~~i~vDGG~~ 264 (268)
T d2h7ma1 222 DQRAPIGWNMKDATPVAKTVCALLSDWLPATTGDIIYADGGAH 264 (268)
T ss_dssp HHHCTTCCCTTCCHHHHHHHHHHHSSSCTTCCSEEEEESTTGG
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHhCchhcCccCCEEEECcCcc
Confidence 0001112236889999999999997543 24688888877653
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=99.65 E-value=3e-15 Score=140.33 Aligned_cols=202 Identities=13% Similarity=0.152 Sum_probs=127.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
||+||||||+++||+++++.|+++|++|++++|+... +..|+.+....+.
T Consensus 1 mkVvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~~------------------------------~~~d~~~~~~~~~ 50 (257)
T d1fjha_ 1 MSIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAE------------------------------VIADLSTAEGRKQ 50 (257)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSS------------------------------EECCTTSHHHHHH
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChHH------------------------------HHHHhcCHHHHHH
Confidence 5789999999999999999999999999999997532 2357776655443
Q ss_pred Hh--------cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHH----hCCCCEEEEEccccccCCCCch-----
Q 013273 160 AL--------GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAAT----IAKVNHFIMVSSLGTNKFGFPA----- 222 (446)
Q Consensus 160 a~--------~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~----~~~v~r~V~vSS~~~~~~~~~~----- 222 (446)
.+ +.+|++|||||.... ...+.....+|..+...+.+... +.......++++..........
T Consensus 51 ~~~~~~~~~~~~id~lv~~Ag~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (257)
T d1fjha_ 51 AIADVLAKCSKGMDGLVLCAGLGPQ-TKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDKNPLAL 129 (257)
T ss_dssp HHHHHHTTCTTCCSEEEECCCCCTT-CSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGGCTTHH
T ss_pred HHHHHHHHhCCCCcEEEEcCCCCCc-HHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhhhhhhh
Confidence 32 458999999986432 12223334567777766665543 3344566666654321111000
Q ss_pred -----------------hhhchhhHHHHHHHHHHHHHH-------hCCCCEEEEecCCccCCCcccc-cc--cceeeccc
Q 013273 223 -----------------AILNLFWGVLLWKRKAEEALI-------ASGLPYTIVRPGGMERPTDAYK-ET--HNITLSQE 275 (446)
Q Consensus 223 -----------------~~~~~~~~Y~~sK~~~E~~l~-------~~gl~~tivRPg~v~gp~~~~~-~~--~~~~~~~~ 275 (446)
........|+.+|...+.+.+ .+|++++.|.||++.++..... .. ....+...
T Consensus 130 ~~~~g~~~~i~s~~~~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~~~~~~~~~~~~~~~ 209 (257)
T d1fjha_ 130 ALEAGEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAGLQDPRYGESIAKF 209 (257)
T ss_dssp HHHHTCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC---------------------C
T ss_pred hccCCcEEEEeeehhccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHhhcCCHHHHHHHHhc
Confidence 001223469999999998876 4799999999999987642111 00 01111112
Q ss_pred CcccCCccCHHHHHHHHHHHHhCCC-CCCCcEEEEecC
Q 013273 276 DTLFGGQVSNLQVAELLACMAKNRS-LSYCKVVEVIAE 312 (446)
Q Consensus 276 ~~~~~~~v~~~DvA~ai~~ll~~~~-~~~~~v~ni~~~ 312 (446)
....+.+..++|||+++++|+.+.. ...|+++.+-++
T Consensus 210 ~~PlgR~g~p~eva~~v~fL~S~~s~~itG~~i~vDGG 247 (257)
T d1fjha_ 210 VPPMGRRAEPSEMASVIAFLMSPAASYVHGAQIVIDGG 247 (257)
T ss_dssp CCSTTSCCCTHHHHHHHHHHTSGGGTTCCSCEEEESTT
T ss_pred CCCCCCCcCHHHHHHHHHHHhCchhCCccCceEEeCCC
Confidence 2334567899999999999997543 357888888665
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=99.64 E-value=6.3e-16 Score=151.11 Aligned_cols=228 Identities=11% Similarity=0.126 Sum_probs=143.4
Q ss_pred CCEEEEEC--CCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc--------
Q 013273 80 DNLAFVAG--ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC-------- 149 (446)
Q Consensus 80 ~~~VlVtG--atG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~-------- 149 (446)
+|++|||| ++.+||+++++.|+++|++|++..|+.......... ...++...................+
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNIFMKNY-KNGKFDNDMIIDKDKKMNILDMLPFDASFDTAN 80 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHH-HTTTTTGGGEETTTEECCEEEEEECCTTCSSGG
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhhhhHHH-HHHhhhhHHHHHHHhhhhhhhcccccceehhhc
Confidence 57899999 557999999999999999999999887654433221 1111111100000001122233333
Q ss_pred ------------CCCChhcHHHH-------hcCCCEEEEcccCCCC--------ccCCCCCcccchHHHHHHHHHHHHhC
Q 013273 150 ------------DLEKRVQIEPA-------LGNASVVICCIGASEK--------EVFDITGPYRIDFQATKNLVDAATIA 202 (446)
Q Consensus 150 ------------Dl~d~~~~~~a-------~~~~D~VI~~Ag~~~~--------~~~~~~~~~~vNv~g~~~l~~aa~~~ 202 (446)
|+.+.++++++ ++++|++|||||.... +..+|...+++|+.+...+++++...
T Consensus 81 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~ 160 (329)
T d1uh5a_ 81 DIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNI 160 (329)
T ss_dssp GCCHHHHTSHHHHTCCCCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred ccchhhhhhhhhhhhhHHHHHHHHHHHHHHhCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhh
Confidence 44555555544 4789999999985321 22335556788999999999988764
Q ss_pred --CCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHH--------hCCCCEEEEecCCccCCCcccc-------
Q 013273 203 --KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALI--------ASGLPYTIVRPGGMERPTDAYK------- 265 (446)
Q Consensus 203 --~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~--------~~gl~~tivRPg~v~gp~~~~~------- 265 (446)
..+++|++||.+..... + .....|+.+|..++.+.+ ++||+++.|.||.+-++.....
T Consensus 161 m~~~GsIv~iss~~~~~~~-p----~y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~T~a~~~i~g~~~~~ 235 (329)
T d1uh5a_ 161 MKPQSSIISLTYHASQKVV-P----GYGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSRAATAINKLNNTY 235 (329)
T ss_dssp EEEEEEEEEEECGGGTSCC-T----TCTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCTTGGGCC------
T ss_pred cccccccccceeehhcccc-c----ccchhhhhhhccccccchhhHHHHhcccCcEEEEEecCcccchhhhcccchhhhh
Confidence 33589999987764321 1 223458999999987765 2699999999999865210000
Q ss_pred -------------c-----------c--ccee------------ecccCcccCCccCHHHHHHHHHHHHhCC-CCCCCcE
Q 013273 266 -------------E-----------T--HNIT------------LSQEDTLFGGQVSNLQVAELLACMAKNR-SLSYCKV 306 (446)
Q Consensus 266 -------------~-----------~--~~~~------------~~~~~~~~~~~v~~~DvA~ai~~ll~~~-~~~~~~v 306 (446)
. . .... ........+.+..++|||.++++|+.+. ....|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pl~R~~~pedvA~~v~fLaSd~s~~iTGq~ 315 (329)
T d1uh5a_ 236 ENNTNQNKNRNRHDVHNIMNNSGEKEEKKISASQNYTFIDYAIEYSEKYAPLRQKLLSTDIGSVASFLLSRESRAITGQT 315 (329)
T ss_dssp ------------------------------------CHHHHHHHHHHHHSSSCSCCCHHHHHHHHHHHHSGGGTTCCSCE
T ss_pred hhhhhhhhccccccccccccccccccchhhhhhhcccchHHHHHHHhccCCCCCCcCHHHHHHHHHHHhCchhCCccCCe
Confidence 0 0 0000 0001112356789999999999999764 3357888
Q ss_pred EEEecCC
Q 013273 307 VEVIAET 313 (446)
Q Consensus 307 ~ni~~~~ 313 (446)
+.|-++-
T Consensus 316 i~VDGG~ 322 (329)
T d1uh5a_ 316 IYVDNGL 322 (329)
T ss_dssp EEESTTG
T ss_pred EEECCCc
Confidence 8887763
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=99.40 E-value=1.6e-13 Score=123.31 Aligned_cols=84 Identities=21% Similarity=0.194 Sum_probs=75.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.++|+|+||||+|+||+.+++.|+++|++|++++|+.++.+++.+.+... .++.+..+|+.|.++
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~--------------~~~~~~~~d~~~~~~ 85 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKR--------------FKVNVTAAETADDAS 85 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHH--------------HTCCCEEEECCSHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhc--------------cchhhhhhhcccHHH
Confidence 467899999999999999999999999999999999999988887776543 456778899999999
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
++++++++|+||||||..
T Consensus 86 ~~~~~~~iDilin~Ag~g 103 (191)
T d1luaa1 86 RAEAVKGAHFVFTAGAIG 103 (191)
T ss_dssp HHHHTTTCSEEEECCCTT
T ss_pred HHHHhcCcCeeeecCccc
Confidence 999999999999999864
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.61 E-value=2.6e-07 Score=76.66 Aligned_cols=95 Identities=18% Similarity=0.167 Sum_probs=73.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|+|.|+ |.+|+.+++.|.+.|++|+++++++++.+.+.+. -++.++.+|.+|.+.++++
T Consensus 1 M~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~------------------~~~~vi~Gd~~~~~~l~~~ 61 (132)
T d1lssa_ 1 MYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE------------------IDALVINGDCTKIKTLEDA 61 (132)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH------------------CSSEEEESCTTSHHHHHHT
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhh------------------hhhhhccCcccchhhhhhc
Confidence 68999996 9999999999999999999999999887765431 2578899999999999887
Q ss_pred -hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 161 -LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 161 -~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
+..+|+++-+..- .+.|+. +...+++.+.+++|-
T Consensus 62 ~i~~a~~vv~~t~~-----------d~~N~~----~~~~~k~~~~~~iI~ 96 (132)
T d1lssa_ 62 GIEDADMYIAVTGK-----------EEVNLM----SSLLAKSYGINKTIA 96 (132)
T ss_dssp TTTTCSEEEECCSC-----------HHHHHH----HHHHHHHTTCCCEEE
T ss_pred ChhhhhhhcccCCc-----------HHHHHH----HHHHHHHcCCceEEE
Confidence 5889999876422 123433 334556677777764
|
| >d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Lactobacillus pentosus [TaxId: 1589]
Probab=98.59 E-value=3.2e-07 Score=77.75 Aligned_cols=118 Identities=12% Similarity=0.112 Sum_probs=81.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
|...+||.|.|+ |++|..++..|+.+| .+|+++++++++.......+..... ......+..+|+
T Consensus 2 m~~~~KI~IIGa-G~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~----------~~~~~~~~~~d~--- 67 (146)
T d1ez4a1 2 MPNHQKVVLVGD-GAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQA----------FTAPKKIYSGEY--- 67 (146)
T ss_dssp BTTBCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGG----------GSCCCEEEECCG---
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhcccc----------ccCCceEeeccH---
Confidence 455679999995 999999999999988 6899999998877655544443211 112344555554
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+.++|+||.++|.......+....+..|+.....+++...+.+.+-+|.+-|
T Consensus 68 ----~~~~~adivvitag~~~~~g~~r~~l~~~N~~i~~~~~~~i~~~~p~aivivvt 121 (146)
T d1ez4a1 68 ----SDCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAA 121 (146)
T ss_dssp ----GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECS
T ss_pred ----HHhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCcEEEEeC
Confidence 236889999999997665555556667889999999999999987666665544
|
| >d1hyea1 c.2.1.5 (A:1-145) MJ0490, lactate/malate dehydrogenase {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: MJ0490, lactate/malate dehydrogenase species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=98.42 E-value=1.3e-06 Score=73.79 Aligned_cols=117 Identities=16% Similarity=0.096 Sum_probs=79.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|||.|+||+|.||..++..|+.+| .++.+++++++ +.+.+...+.... . .....+++...--.|
T Consensus 1 MKV~IiGA~G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~~~g~a~Dl~~~~--------~-~~~~~~~~~~~~~~d--- 68 (145)
T d1hyea1 1 MKVTIIGASGRVGSATALLLAKEPFMKDLVLIGREHSINKLEGLREDIYDAL--------A-GTRSDANIYVESDEN--- 68 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTCTTCCEEEEEECGGGHHHHHHHHHHHHHHH--------T-TSCCCCEEEEEETTC---
T ss_pred CEEEEECCCChHHHHHHHHHHhCCcccccccccchhhhHhhhcccccchhcc--------c-ccccCCccccCCcch---
Confidence 589999999999999999999998 58999998764 3343333443321 0 111223332111111
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
.+.++++|+||-+||.......+....++.|..-...+++..++.+-+.++.+
T Consensus 69 -~~~l~~aDvVVitAG~~~~~g~sR~dl~~~Na~iv~~i~~~i~~~~~~~iivV 121 (145)
T d1hyea1 69 -LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEICDTKIFVI 121 (145)
T ss_dssp -GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
T ss_pred -HHHhccceEEEEecccccCCCCChhhhhhhhHHHHHHHHHHHhccCCCeEEEE
Confidence 24678999999999976554444455678899999999999988865555544
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=98.41 E-value=2.4e-06 Score=72.37 Aligned_cols=117 Identities=16% Similarity=0.188 Sum_probs=84.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..++||.|+|| |+||..++..|+.+| .+++++++++++......++... ..+....+.+...|.
T Consensus 4 ~~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~---------~~~~~~~~~~~~~d~---- 69 (148)
T d1ldna1 4 NGGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHG---------KVFAPKPVDIWHGDY---- 69 (148)
T ss_dssp TTSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHH---------TTSSSSCCEEEECCG----
T ss_pred CCCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhC---------ccccCCCeEEEECCH----
Confidence 34568999996 999999999999987 48999999988776655555432 111223455555543
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vS 211 (446)
+.+.++|+||.++|............+..|..-...+++..++++.+ .||.+|
T Consensus 70 ---~~l~daDvvvitag~~~~~~~~R~dl~~~N~~i~~~i~~~i~~~~p~a~~ivvt 123 (148)
T d1ldna1 70 ---DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLVAT 123 (148)
T ss_dssp ---GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEECS
T ss_pred ---HHhccceeEEEecccccccCcchhHHHHHHHHHHHHHHHHHHhhCCCceEEEec
Confidence 34778999999999876655555666778999899999998887554 444444
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.36 E-value=9.9e-07 Score=74.41 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=81.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
||.|+||+|.||+.++..|+.+| .++++++.++.+...+ .+. ..........+ ....+..+
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~--Dl~-----------~~~~~~~~~~~----~~~~~~~~ 64 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA--DLS-----------HIETRATVKGY----LGPEQLPD 64 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH--HHT-----------TSSSSCEEEEE----ESGGGHHH
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH--HHh-----------hhhhhcCCCeE----EcCCChHH
Confidence 79999999999999999999888 4788898876543321 111 11111111211 22456778
Q ss_pred HhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 160 ALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
.++++|+||..||.......+....++.|+...+.+++.+.+++.+-+|.+-|
T Consensus 65 ~~~~aDivVitag~~~~~g~sR~~ll~~N~~i~~~i~~~i~~~~p~~iiivvt 117 (144)
T d1mlda1 65 CLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS 117 (144)
T ss_dssp HHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred HhCCCCEEEECCCcCCCCCCCcchHHHHHHHHHHHHHHHHHhcCCCeEEEEec
Confidence 89999999999997666555666678889999999999999987665555544
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.32 E-value=1.4e-06 Score=75.06 Aligned_cols=75 Identities=20% Similarity=0.336 Sum_probs=61.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.|+|+|.|| |++|+++++.|.++||+|++++|+.+++..+.+. .........+..+......
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~-----------------~~~~~~~~~~~~~~~~~~~ 63 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAG-----------------VQHSTPISLDVNDDAALDA 63 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTT-----------------CTTEEEEECCTTCHHHHHH
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhc-----------------ccccccccccccchhhhHh
Confidence 478999996 9999999999999999999999999988876431 1455666677777778888
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
.+...|.++.+..
T Consensus 64 ~i~~~~~~i~~~~ 76 (182)
T d1e5qa1 64 EVAKHDLVISLIP 76 (182)
T ss_dssp HHTTSSEEEECSC
T ss_pred hhhccceeEeecc
Confidence 8889999987753
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=98.29 E-value=2.3e-06 Score=70.72 Aligned_cols=72 Identities=22% Similarity=0.278 Sum_probs=60.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+++|.|+ |.+|+++++.|.+.|++|++++.++++.+.+.+ .....+.+|.++++.+.++
T Consensus 1 k~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~~-------------------~~~~~~~gd~~~~~~l~~a 60 (134)
T d2hmva1 1 KQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYAS-------------------YATHAVIANATEENELLSL 60 (134)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTTT-------------------TCSEEEECCTTCTTHHHHH
T ss_pred CEEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHHH-------------------hCCcceeeecccchhhhcc
Confidence 45888885 999999999999999999999999987765421 3457788999999999887
Q ss_pred -hcCCCEEEEccc
Q 013273 161 -LGNASVVICCIG 172 (446)
Q Consensus 161 -~~~~D~VI~~Ag 172 (446)
+.++|+||-+.+
T Consensus 61 ~i~~a~~vi~~~~ 73 (134)
T d2hmva1 61 GIRNFEYVIVAIG 73 (134)
T ss_dssp TGGGCSEEEECCC
T ss_pred CCccccEEEEEcC
Confidence 788999887754
|
| >d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Toxoplasma gondii [TaxId: 5811]
Probab=98.24 E-value=1.6e-06 Score=73.89 Aligned_cols=121 Identities=12% Similarity=0.021 Sum_probs=82.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+++||.|.|+ |.||..++..|+..+ .++++++.+++++......+....-. ......... ..
T Consensus 4 ~~k~~KI~IIGa-G~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~--------~~~~~~~~~------~~ 68 (154)
T d1pzga1 4 VQRRKKVAMIGS-GMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSV--------VDTNVSVRA------EY 68 (154)
T ss_dssp CSCCCEEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHH--------TTCCCCEEE------EC
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccc--------cCCeeEEec------cC
Confidence 456789999997 999999999888888 58999999988776665555432100 000111111 12
Q ss_pred cHHHHhcCCCEEEEcccCCCCccC-----CCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 156 QIEPALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~-----~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
..++++.++|+||.++|......+ +....+..|......+++.+++.+.+-+|.+-|
T Consensus 69 ~~~~~~~~adiVvitag~~~~~g~~~~~~tR~~l~~~n~~iv~~i~~~i~~~~p~aiviivs 130 (154)
T d1pzga1 69 SYEAALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFIIVVT 130 (154)
T ss_dssp SHHHHHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECC
T ss_pred chhhhhcCCCeEEEecccccCCCCCCcccchhhhhhhhHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 356778999999999996543221 233456678888999999998887665555443
|
| >d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.15 E-value=1.3e-05 Score=68.45 Aligned_cols=117 Identities=15% Similarity=0.075 Sum_probs=82.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+...+|.|+|+ |.||..++..|+..| .++++++++++++......+.... ............|.
T Consensus 17 ~~~~KI~IIGa-G~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~---------~~~~~~~~~~~~d~---- 82 (159)
T d2ldxa1 17 LSRCKITVVGV-GDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGS---------LFLSTPKIVFGKDY---- 82 (159)
T ss_dssp CCCCEEEEECC-SHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTT---------TTCSCCEEEEESSG----
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcc---------hhcCCCeEEeccch----
Confidence 34468999995 999999999999998 489999999887766555555431 11112233333332
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
+.+.++|+||..||.......+....++.|+.....++...++.+.+- ++.+|
T Consensus 83 ---~~~~~adivvitag~~~~~~~~R~dll~~N~~i~~~i~~~i~~~~p~~ivivvt 136 (159)
T d2ldxa1 83 ---NVSANSKLVIITAGARMVSGQTRLDLLQRNVAIMKAIVPGVIQNSPDCKIIVVT 136 (159)
T ss_dssp ---GGGTTEEEEEECCSCCCCTTTCSSCTTHHHHHHHHHHTTTHHHHSTTCEEEECS
T ss_pred ---hhhccccEEEEecccccCCCCCHHHHHHHHHHHHHHHHHHHhccCCCeEEEEeC
Confidence 345789999999998766666666778889999999988888775554 44444
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.13 E-value=1.7e-06 Score=74.99 Aligned_cols=47 Identities=23% Similarity=0.373 Sum_probs=43.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM 127 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~ 127 (446)
|||.|+||+|.+|++|++.|+++||+|++.+|++++.+.+.+++...
T Consensus 1 Mki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i~~~ 47 (212)
T d1jaya_ 1 MRVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRI 47 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHH
T ss_pred CEEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhc
Confidence 67999999999999999999999999999999999999988877654
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.12 E-value=1.2e-05 Score=67.60 Aligned_cols=114 Identities=18% Similarity=0.175 Sum_probs=76.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHH-CC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLK-LG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~-~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+|.|+|++|.||.+++..|+. .+ .++++++..+ ......-.+.. .........+ .....
T Consensus 1 MKV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~-~~~g~a~Dl~h-----------~~~~~~~~~~----~~~~~- 63 (145)
T d2cmda1 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAP-VTPGVAVDLSH-----------IPTAVKIKGF----SGEDA- 63 (145)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSST-THHHHHHHHHT-----------SCSSCEEEEE----CSSCC-
T ss_pred CEEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccc-cchhHHHHHHC-----------CccccCCcEE----EcCCC-
Confidence 6899999999999999988764 34 7899988764 33332222221 1111222222 11222
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
.+.+.++|+||.+||.......+....+..|....+.+++.+.+.+.+. ||.+|
T Consensus 64 ~~~~~~aDvvvitaG~~~k~g~~R~dl~~~N~~i~~~v~~~i~~~~p~aivivvt 118 (145)
T d2cmda1 64 TPALEGADVVLISAGVRRKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT 118 (145)
T ss_dssp HHHHTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS
T ss_pred ccccCCCCEEEECCCccCCCCcchhhHHHHHHHHHHHHHHHHHhhCCCcEEEEcc
Confidence 3468899999999998766656666678889999999999998886554 44444
|
| >d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]
Probab=98.11 E-value=2.2e-05 Score=67.00 Aligned_cols=117 Identities=15% Similarity=0.113 Sum_probs=82.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
...++|.|.|+ |.||..++..|+.+|. +++++++++++.......+...... .........+|.
T Consensus 18 ~~~~KV~IIGa-G~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~---------~~~~~~~~~~d~---- 83 (160)
T d1i0za1 18 VPNNKITVVGV-GQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLF---------LQTPKIVADKDY---- 83 (160)
T ss_dssp CCSSEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGG---------CCCSEEEECSSG----
T ss_pred CCCCeEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccc---------cCCCeEEeccch----
Confidence 34569999996 9999999999999994 8999999988776655555432111 112222223332
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
+.+.++|+||..||.......+....++.|+...+.++...++.+.+- ||.+|
T Consensus 84 ---~~~~~adiVVitAg~~~~~g~tR~~l~~~N~~i~~~i~~~i~~~~p~aiiivvt 137 (160)
T d1i0za1 84 ---SVTANSKIVVVTAGVRQQEGESRLNLVQRNVNVFKFIIPQIVKYSPDCIIIVVS 137 (160)
T ss_dssp ---GGGTTCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECS
T ss_pred ---hhcccccEEEEecCCccccCcchHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeC
Confidence 236889999999998665555556667789999999999998876554 44444
|
| >d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH species: Lactobacillus confusus [TaxId: 1583]
Probab=98.06 E-value=2.3e-05 Score=65.94 Aligned_cols=114 Identities=15% Similarity=0.096 Sum_probs=76.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+||.|+|+ |.||..++..|+.+| .+++++++++++.......+..... .......+...|.
T Consensus 2 kKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~---------~~~~~~~~~~~d~------- 64 (146)
T d1hyha1 2 RKIGIIGL-GNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMA---------NLEAHGNIVINDW------- 64 (146)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGG---------GSSSCCEEEESCG-------
T ss_pred CeEEEECc-CHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhcccc---------ccCCccceeccCH-------
Confidence 68999995 999999999999987 5899999998877655544443211 1112334444442
Q ss_pred HHhcCCCEEEEcccCCCCc----cCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 159 PALGNASVVICCIGASEKE----VFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~----~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+.+.++|+||-+||..... ..+-...++.|......+++..++.+.+-++.+-
T Consensus 65 ~~l~~adiVVitaG~~~~~~~~~g~~R~~l~~~N~~i~~~i~~~i~~~~p~aivivv 121 (146)
T d1hyha1 65 AALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVVI 121 (146)
T ss_dssp GGGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHhccccEEEEeccccccccccCCccHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 3368899999999964321 1222344667888899999999888655555444
|
| >d1o6za1 c.2.1.5 (A:22-162) Malate dehydrogenase {Archaeon Haloarcula marismortui [TaxId: 2238]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Haloarcula marismortui [TaxId: 2238]
Probab=98.06 E-value=1.8e-05 Score=66.19 Aligned_cols=112 Identities=10% Similarity=-0.021 Sum_probs=76.4
Q ss_pred EEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCc--hhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV--QRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~--~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
||.|+||+|.||..++..|+.+| .++++++.+. +........+.... . + .....+..+|..
T Consensus 2 KV~IiGaaG~VG~~~A~~l~~~~l~~el~L~Di~~~~~~~~g~a~Dl~~~~--------~-~-~~~~~i~~~~~~----- 66 (142)
T d1o6za1 2 KVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDDTVGQAADTNHGI--------A-Y-DSNTRVRQGGYE----- 66 (142)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHHHHHHHHHHHHHH--------T-T-TCCCEEEECCGG-----
T ss_pred eEEEECCCCcHHHHHHHHHHhCCCCCEEEEEecCCcccccceeecchhhcc--------c-c-cCCceEeeCCHH-----
Confidence 79999999999999999999998 4788888543 33333333333210 0 1 134455555432
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
.+.++|+||.+||.......+....++.|..-.+.+++..++.+.+-++.+
T Consensus 67 --~~~~aDiVvitaG~~~~~g~~R~dl~~~N~~I~~~i~~~i~~~~p~~i~iv 117 (142)
T d1o6za1 67 --DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLT 117 (142)
T ss_dssp --GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEE
T ss_pred --HhhhcCEEEEecccccccCCchhhHHHHHHHHHHHHHHHHHhcCCCceEEE
Confidence 257999999999976554444455677899999999999998865544443
|
| >d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.05 E-value=1.2e-05 Score=67.13 Aligned_cols=113 Identities=19% Similarity=0.125 Sum_probs=78.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|||.|.|+ |.+|..++..|+.+| .+++++++++++.......+.... .......+..+|.
T Consensus 1 mKI~IIGa-G~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~----------~~~~~~~~~~~~~------- 62 (140)
T d1a5za1 1 MKIGIVGL-GRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGT----------PFTRRANIYAGDY------- 62 (140)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHG----------GGSCCCEEEECCG-------
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccc----------cccccccccCCcH-------
Confidence 58999996 999999999999887 589999999877665444443320 0113444444432
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+.++++|+||.+||............+..|..-...+++...+.+.+-++.+-
T Consensus 63 ~~~~~adivvitag~~~~~g~~r~dl~~~N~~I~~~i~~~i~~~~p~aivivv 115 (140)
T d1a5za1 63 ADLKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVV 115 (140)
T ss_dssp GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred HHhcCCCEEEEecccccCCCcchhhhhccccchHHHHHHHHHhcCCCcEEEEe
Confidence 34688999999999765544444445667888888899999887655555543
|
| >d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=98.02 E-value=1.8e-05 Score=66.32 Aligned_cols=115 Identities=15% Similarity=0.084 Sum_probs=78.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE-cCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE-CDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~-~Dl~d~~~~ 157 (446)
|||.|.|+ |.+|..++..|+.+| .+++++++++++.......+....- . .. ....+.. .|+
T Consensus 1 MKI~IIGa-G~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~-------~-~~-~~~~i~~~~d~------ 64 (142)
T d1ojua1 1 MKLGFVGA-GRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-------G-ID-KYPKIVGGADY------ 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHH-------T-TT-CCCEEEEESCG------
T ss_pred CEEEEECc-CHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhcc-------c-cC-CCCccccCCCH------
Confidence 68999996 999999999999888 5899999998876654444433210 0 00 1222222 232
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
+.+.++|+||-.||.......+....+..|..-...+++.+++.+.+-++.+-|
T Consensus 65 -~~~~~adiVvitag~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~p~aivivvt 118 (142)
T d1ojua1 65 -SLLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT 118 (142)
T ss_dssp -GGGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS
T ss_pred -HHhccccEEEEeccccCCCCCchHHHHHHhhHHHHHHHHHHHhhCCCcEEEEec
Confidence 367899999999997655444445556778888889999998876555555443
|
| >d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]
Probab=98.01 E-value=2.4e-05 Score=65.57 Aligned_cols=113 Identities=17% Similarity=0.105 Sum_probs=78.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.||.|+|+ |++|.+++..|+.+| .+++++++++++.......+.... . ......+...+ ++
T Consensus 2 ~Ki~IIGa-G~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~--------~--~~~~~~i~~~~-----~~- 64 (143)
T d1llda1 2 TKLAVIGA-GAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGS--------S--FYPTVSIDGSD-----DP- 64 (143)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTG--------G--GSTTCEEEEES-----CG-
T ss_pred CEEEEECC-CHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhcc--------c--cCCCceeecCC-----CH-
Confidence 37999996 999999999999998 489999999877665444444320 0 11223333222 12
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
+.+.++|+||.+||.......+....+..|..-...+++..++.+-+-++.+
T Consensus 65 ~~~~daDvVVitaG~~~~~g~~R~dl~~~N~~i~~~i~~~i~~~~p~ai~iv 116 (143)
T d1llda1 65 EICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYML 116 (143)
T ss_dssp GGGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEE
T ss_pred HHhhCCcEEEEecccccCCCCchhhhhhhhHHHHHHHHHHHHhhCCCeEEEE
Confidence 2467899999999986655444455677899999999999988865544443
|
| >d1guza1 c.2.1.5 (A:1-142) Malate dehydrogenase {Chlorobium vibrioforme [TaxId: 1098]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chlorobium vibrioforme [TaxId: 1098]
Probab=98.01 E-value=2.7e-05 Score=65.12 Aligned_cols=114 Identities=16% Similarity=0.059 Sum_probs=76.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
|||.|+|| |.+|..++..|+..| .+++++++++++.......+..... .......+...+ | .
T Consensus 1 mKI~IIGa-G~VG~~la~~l~~~~l~~el~L~Di~~~~~~~~~~d~~~~~~---------~~~~~~~i~~~~--~----~ 64 (142)
T d1guza1 1 MKITVIGA-GNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYESGP---------VGLFDTKVTGSN--D----Y 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTTHH---------HHTCCCEEEEES--C----G
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCCceEEEeccccccchhhhhhhhcccc---------hhcccceEEecC--C----H
Confidence 57999996 999999999999998 6999999998876654433322100 001233443221 1 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEE
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMV 210 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~v 210 (446)
+.+.++|+||.+||.......+....++.|..-...+++.+++.+.+-++.+
T Consensus 65 ~~~~dadvvvitag~~~~~g~~r~~l~~~N~~i~~~i~~~i~~~~p~aiviv 116 (142)
T d1guza1 65 ADTANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIV 116 (142)
T ss_dssp GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEE
T ss_pred HHhcCCeEEEEEEecCCCCCCchHHHHHHHHHHHHHHHHHhhccCCCeEEEE
Confidence 3578999999999976544444344466788888888888888755444443
|
| >d1y7ta1 c.2.1.5 (A:0-153) Malate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.97 E-value=6.4e-06 Score=70.02 Aligned_cols=118 Identities=14% Similarity=0.122 Sum_probs=73.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC----e---EEEEE--cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF----R---VRAGV--RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~----~---V~~~~--R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
...++|.|+||+|+||++++..|+..+. . ..++. ++..+...+...++.. ....+..+.
T Consensus 2 ~~p~KV~IiGA~G~VG~~~a~~l~~~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~ 69 (154)
T d1y7ta1 2 KAPVRVAVTGAAGQIGYSLLFRIAAGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDC------------AFPLLAGLE 69 (154)
T ss_dssp CCCEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT------------TCTTEEEEE
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHhccccccccchhHhHhccccchhhHcCchhhhhcc------------ccccccccc
Confidence 3456999999999999999999998752 1 12222 2233333322222211 112333333
Q ss_pred cCCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC--CEEEEEc
Q 013273 149 CDLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVS 211 (446)
Q Consensus 149 ~Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v--~r~V~vS 211 (446)
. .....+.++++|+||-++|.......+....+..|+.-...+++...+... ..++.+|
T Consensus 70 ~----~~~~~~~~~~advViitaG~~~~pg~~r~dl~~~N~~i~~~~~~~i~k~a~~~~~vivvs 130 (154)
T d1y7ta1 70 A----TDDPKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVG 130 (154)
T ss_dssp E----ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred c----CCchhhhcccccEEEeecCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEec
Confidence 2 233567889999999999987655555455577789999999999887522 2454554
|
| >d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Clostridium thermocellum [TaxId: 1515]
Probab=97.96 E-value=1.1e-05 Score=67.60 Aligned_cols=113 Identities=13% Similarity=0.074 Sum_probs=71.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+||.|.|+ |.||..++..|+.+| .+++++++++++......++... ........+..+| .
T Consensus 2 ~KI~IIGa-G~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~----------~~~~~~~~~~~~~-------~ 63 (142)
T d1y6ja1 2 SKVAIIGA-GFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHG----------LPFMGQMSLYAGD-------Y 63 (142)
T ss_dssp CCEEEECC-SHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTS----------CCCTTCEEEC--C-------G
T ss_pred CeEEEECC-CHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccC----------cccCCCeeEeeCc-------H
Confidence 47899996 999999999999998 48999999887654433333211 1112334433332 2
Q ss_pred HHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCE-EEEEc
Q 013273 159 PALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNH-FIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r-~V~vS 211 (446)
+.+.++|+||.+||.......+....+..|..-...+++.+.+.+.+- ||.+|
T Consensus 64 ~~~~~adivvitag~~~~~~~~r~~l~~~N~~i~~~i~~~i~~~~p~ai~ivvt 117 (142)
T d1y6ja1 64 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILVVS 117 (142)
T ss_dssp GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEECS
T ss_pred HHhCCCceEEEecccccCcCcchhHHhhHHHHHHHHHHHHhhccCCCceEEEec
Confidence 357889999999997654444444456778888999999998876554 44443
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=97.86 E-value=8.6e-05 Score=64.45 Aligned_cols=84 Identities=11% Similarity=0.085 Sum_probs=65.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++|+|.| +|+.|++++..|++.|. +++++.|+.++...+....+++... -.......|+.+.+.
T Consensus 16 l~~k~vlIlG-aGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~-----------~~~~~~~~~~~~~~~ 83 (182)
T d1vi2a1 16 IKGKTMVLLG-AGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNEN-----------TDCVVTVTDLADQQA 83 (182)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHH-----------SSCEEEEEETTCHHH
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhh-----------cCcceEeeecccccc
Confidence 4568999999 49999999999999995 7999999987776655443332111 234456788999999
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+.+.+..+|+|||+...
T Consensus 84 ~~~~~~~~diiIN~Tp~ 100 (182)
T d1vi2a1 84 FAEALASADILTNGTKV 100 (182)
T ss_dssp HHHHHHTCSEEEECSST
T ss_pred hhhhhcccceeccccCC
Confidence 99999999999999764
|
| >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Chloroflexus aurantiacus [TaxId: 1108]
Probab=97.84 E-value=4.6e-05 Score=63.63 Aligned_cols=113 Identities=15% Similarity=0.108 Sum_probs=73.3
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHh-hhcccccccCCCCCCceEEE-EcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQM-KLDGELANKGIQPVEMLELV-ECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~-~l~~~~~~~g~~~~~~v~~v-~~Dl~d~~~~ 157 (446)
++|.|+|+ |.||..++..|+.++ .++++++.++++.......+... .+. .....+. ..|.
T Consensus 2 ~KI~IIGa-G~VG~~~A~~l~~~~l~dl~l~D~~~~~~~~~~~Dl~~~~~~~----------~~~~~i~~~~d~------ 64 (142)
T d1uxja1 2 KKISIIGA-GFVGSTTAHWLAAKELGDIVLLDIVEGVPQGKALDLYEASPIE----------GFDVRVTGTNNY------ 64 (142)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSSSSHHHHHHHHHHTTHHHH----------TCCCCEEEESCG------
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCcceEEEEeeccccchhHHHHhhcccccc----------CCCCEEEecCcH------
Confidence 58999996 999999999999887 58999999888766544444321 001 0122222 2222
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+.+.++|+||-+||.......+....+..|..-...+++...+.+.+-++.+-
T Consensus 65 -~~~~~advvvitag~~~~~~~~r~dl~~~N~~i~~~i~~~i~k~~p~aivivv 117 (142)
T d1uxja1 65 -ADTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIMV 117 (142)
T ss_dssp -GGGTTCSEEEECCSCC---------CHHHHHHHHHHHHHHHGGGCTTCEEEEC
T ss_pred -HHhcCCCEEEEeeeccCCcCcchhHHHhHHHHHHHHHHHHHhccCCCceEEEe
Confidence 23578999999999765545555566788999999999999887655555553
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.84 E-value=2.3e-05 Score=66.86 Aligned_cols=73 Identities=25% Similarity=0.362 Sum_probs=58.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++++|||.|+ |.+|+.+++.|.+.|. +|++..|+.+++..+.+.+. ..+ .+.++
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~------------------~~~-----~~~~~ 77 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLG------------------GEA-----VRFDE 77 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHT------------------CEE-----CCGGG
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhh------------------ccc-----ccchh
Confidence 56789999996 9999999999999996 69999999988887765431 121 23467
Q ss_pred HHHHhcCCCEEEEcccCC
Q 013273 157 IEPALGNASVVICCIGAS 174 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~ 174 (446)
+.+.+..+|+||++.+..
T Consensus 78 ~~~~l~~~Divi~atss~ 95 (159)
T d1gpja2 78 LVDHLARSDVVVSATAAP 95 (159)
T ss_dssp HHHHHHTCSEEEECCSSS
T ss_pred HHHHhccCCEEEEecCCC
Confidence 888899999999998754
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.80 E-value=2e-05 Score=67.90 Aligned_cols=108 Identities=14% Similarity=0.136 Sum_probs=70.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||.| +|+.+++++..|.+.|.+|+++.|+.++.+.+.+.+... ..+..+ ++.+.
T Consensus 16 ~~~k~vlIlG-aGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~--------------~~~~~~--~~~~~--- 75 (170)
T d1nyta1 16 RPGLRILLIG-AGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHT--------------GSIQAL--SMDEL--- 75 (170)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGG--------------SSEEEC--CSGGG---
T ss_pred CCCCEEEEEC-CcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhc--------------cccccc--ccccc---
Confidence 4578999999 599999999999999999999999999988877654322 223332 22221
Q ss_pred HHHhcCCCEEEEcccCCCCccC---C------CCCcccchHHH-HHHHHHHHHhCCCCEE
Q 013273 158 EPALGNASVVICCIGASEKEVF---D------ITGPYRIDFQA-TKNLVDAATIAKVNHF 207 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~---~------~~~~~~vNv~g-~~~l~~aa~~~~v~r~ 207 (446)
....+|+|||+......... + ....+++.|.- ...+++.|++.|.+++
T Consensus 76 --~~~~~dliIN~Tp~G~~~~~~~~~~~~~~~~~~v~D~vY~P~~T~ll~~A~~~G~~~~ 133 (170)
T d1nyta1 76 --EGHEFDLIINATSSGISGDIPAIPSSLIHPGIYCYDMFYQKGKTPFLAWCEQRGSKRN 133 (170)
T ss_dssp --TTCCCSEEEECCSCGGGTCCCCCCGGGCCTTCEEEESCCCSSCCHHHHHHHHTTCCEE
T ss_pred --cccccceeecccccCcccCCCCCcHHHhccCcEEEEeecCCCCCHHHHHHHHcCCCcc
Confidence 12568999999754321110 0 11123444332 2367888888876544
|
| >d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.79 E-value=9.7e-05 Score=62.18 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=77.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhh-hcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.||.|.|+ |.+|..++..|+..+ .++.++++++++.......+.... +.+ ....+...| ..
T Consensus 4 ~KI~IIGa-G~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~----------~~~~v~~~~------~~ 66 (150)
T d1t2da1 4 AKIVLVGS-GMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAY----------SNCKVSGSN------TY 66 (150)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHT----------CCCCEEEEC------CG
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccC----------CCcEEEecc------cc
Confidence 58999995 999999998888877 689999999887766555554321 111 122232221 22
Q ss_pred HHhcCCCEEEEcccCCCCccC-----CCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 159 PALGNASVVICCIGASEKEVF-----DITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 159 ~a~~~~D~VI~~Ag~~~~~~~-----~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+.+.++|+||.++|....... +....+..|......+++.+++.+.+-++.+-
T Consensus 67 ~~~~~advvvitag~~~~~g~~~~~~~R~~l~~~N~~iv~~i~~~i~~~~p~aivivv 124 (150)
T d1t2da1 67 DDLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIVV 124 (150)
T ss_dssp GGGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEEC
T ss_pred cccCCCcEEEEecccccCCCCCccccchhHHHHHHHHHHHHHHHHHHhcCCCeEEEEe
Confidence 456889999999996543211 23344677899999999999888655554443
|
| >d5mdha1 c.2.1.5 (A:1-154) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=97.77 E-value=0.00014 Score=61.41 Aligned_cols=116 Identities=13% Similarity=0.063 Sum_probs=74.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-------eEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-------RVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVECD 150 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-------~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D 150 (446)
.++|.|+||+|.||++++..|+..+. ++++++.+.. +++.+.-++... .. .....+..
T Consensus 3 p~KV~IiGA~G~VG~~la~~l~~~~~~~~~~~~~L~l~d~~~~~~~~~~l~~~~~~~----------~~--~~~~~~~~- 69 (154)
T d5mdha1 3 PIRVLVTGAAGQIAYSLLYSIGNGSVFGKDQPIILVLLDITPMMGVLDGVLMELQDC----------AL--PLLKDVIA- 69 (154)
T ss_dssp CEEEEESSTTSHHHHTTHHHHHTTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHHT----------CC--TTEEEEEE-
T ss_pred ceEEEEECCCCHHHHHHHHHHHHHHhcCCCCccEEEEecCccchhhhhhhhhhhccc----------cc--cccccccc-
Confidence 46899999999999999999986541 3455554432 223322222211 01 12222111
Q ss_pred CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC-CCC-EEEEEc
Q 013273 151 LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA-KVN-HFIMVS 211 (446)
Q Consensus 151 l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~-~v~-r~V~vS 211 (446)
.....++++++|+||-++|............++.|..-.+.+++...++ +-. .+|.+|
T Consensus 70 ---~~~~~~~~~~~dvVVitag~~~~~g~sr~dll~~N~~i~k~~~~~i~k~a~~~~~iivvs 129 (154)
T d5mdha1 70 ---TDKEEIAFKDLDVAILVGSMPRRDGMERKDLLKANVKIFKCQGAALDKYAKKSVKVIVVG 129 (154)
T ss_dssp ---ESCHHHHTTTCSEEEECCSCCCCTTCCTTTTHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ---CcccccccCCceEEEEecccCCCCCCchhHHHHHhHHHHHHHHHHHHhhCCCceEEEEec
Confidence 1235678899999999999876666666677888999999999888775 322 344444
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=97.73 E-value=4.9e-05 Score=65.95 Aligned_cols=79 Identities=18% Similarity=0.119 Sum_probs=54.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+||+|.+|..+++.....|++|++++|++++.+.+.+ + | ....+...|-...+.+
T Consensus 28 ~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~----~---------G----a~~vi~~~~~~~~~~~ 90 (182)
T d1v3va2 28 KGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLKQ----I---------G----FDAAFNYKTVNSLEEA 90 (182)
T ss_dssp CSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T----CSEEEETTSCSCHHHH
T ss_pred CCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHHh----h---------h----hhhhcccccccHHHHH
Confidence 356799999999999999999999999999999999887655432 1 1 1111222222223333
Q ss_pred HHHh--cCCCEEEEcccC
Q 013273 158 EPAL--GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~--~~~D~VI~~Ag~ 173 (446)
.+.. .++|+||++.|.
T Consensus 91 ~~~~~~~Gvd~v~D~vG~ 108 (182)
T d1v3va2 91 LKKASPDGYDCYFDNVGG 108 (182)
T ss_dssp HHHHCTTCEEEEEESSCH
T ss_pred HHHhhcCCCceeEEecCc
Confidence 3333 569999999874
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=97.72 E-value=5.4e-05 Score=65.20 Aligned_cols=108 Identities=12% Similarity=0.181 Sum_probs=70.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|+|.| +|+.|+.++..|.+.+.+|+++.|+.++.+.+.+.+... ..+..+..|-.
T Consensus 16 ~~~k~vlIlG-aGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~--------------~~~~~~~~~~~----- 75 (171)
T d1p77a1 16 RPNQHVLILG-AGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPY--------------GNIQAVSMDSI----- 75 (171)
T ss_dssp CTTCEEEEEC-CSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGG--------------SCEEEEEGGGC-----
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhc--------------cccchhhhccc-----
Confidence 4567899999 699999999999998899999999999988887765432 34555544321
Q ss_pred HHHhcCCCEEEEcccCCCCccCC---------CCCcccchHH-H-HHHHHHHHHhCCCCEE
Q 013273 158 EPALGNASVVICCIGASEKEVFD---------ITGPYRIDFQ-A-TKNLVDAATIAKVNHF 207 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~---------~~~~~~vNv~-g-~~~l~~aa~~~~v~r~ 207 (446)
.+..+|+|||+.......... ....++++|. - ...+++.|++.|...+
T Consensus 76 --~~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~vy~~p~~T~~l~~A~~~g~~~v 134 (171)
T d1p77a1 76 --PLQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNV 134 (171)
T ss_dssp --CCSCCSEEEECCCC-------CCCHHHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCE
T ss_pred --cccccceeeecccccccccccchhhhhhcccceeeeeeccCcccHHHHHHHHHcCCCcc
Confidence 246799999997653221111 1122444442 1 2356777777776444
|
| >d7mdha1 c.2.1.5 (A:23-197) Malate dehydrogenase {Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558]
Probab=97.72 E-value=4.6e-05 Score=65.94 Aligned_cols=117 Identities=10% Similarity=0.022 Sum_probs=75.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-------CeEEEEEcCch--hHHHHHHHHHHhhhcccccccCCCCCCceEEEEc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-------FRVRAGVRSVQ--RAENLVQSVKQMKLDGELANKGIQPVEMLELVEC 149 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-------~~V~~~~R~~~--~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~ 149 (446)
+..+|.|+||+|+||.+++-.|+..+ ..+++++.... .+..+.-+++.. ....+.-+..
T Consensus 23 ~~~kV~I~GA~G~Ig~~l~~~La~g~v~g~~~~i~L~L~di~~~~~~l~g~~mdl~d~------------a~~~~~~~~~ 90 (175)
T d7mdha1 23 KLVNIAVSGAAGMISNHLLFKLASGEVFGQDQPIALKLLGSERSFQALEGVAMELEDS------------LYPLLREVSI 90 (175)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTT------------TCTTEEEEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHcCcccCCCceEEEEEecCccccchhcchhhhhccc------------ccccccCccc
Confidence 34589999999999999999998753 14555555443 223322222221 1122222111
Q ss_pred CCCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC--CEEEEEc
Q 013273 150 DLEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV--NHFIMVS 211 (446)
Q Consensus 150 Dl~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v--~r~V~vS 211 (446)
.....+++.++|+||-.+|............++.|..-...+.+++.+... -+++.+|
T Consensus 91 ----~~~~~~~~~~aDvVvi~ag~~rkpg~tR~Dll~~N~~I~k~~~~~i~~~a~~~~~vlvv~ 150 (175)
T d7mdha1 91 ----GIDPYEVFEDVDWALLIGAKPRGPGMERAALLDINGQIFADQGKALNAVASKNVKVLVVG 150 (175)
T ss_dssp ----ESCHHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS
T ss_pred ----cccchhhccCCceEEEeeccCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEec
Confidence 133578889999999999987666666666778899999999999988522 2455554
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=97.65 E-value=9.7e-05 Score=63.46 Aligned_cols=80 Identities=19% Similarity=0.049 Sum_probs=55.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.|+ |.+|..++..|+++||+|++++|++++.+.+.+..... ...+.............++.++
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~e~ 69 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAII-----------AEGPGLAGTAHPDLLTSDIGLA 69 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEE-----------EESSSCCEEECCSEEESCHHHH
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHcCCCc-----------hhhhhhhhhhhhhhhhhhhHhH
Confidence 68999995 99999999999999999999999988776654321000 0001222222222223457888
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||.+..
T Consensus 70 ~~~aD~iii~v~ 81 (184)
T d1bg6a2 70 VKDADVILIVVP 81 (184)
T ss_dssp HTTCSEEEECSC
T ss_pred hcCCCEEEEEEc
Confidence 999999999864
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.63 E-value=7.7e-05 Score=64.08 Aligned_cols=75 Identities=16% Similarity=0.242 Sum_probs=53.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+|||+||+|.||...++.+...|++|+++++++++.+.+.+ + | --++ .|..+.+..+
T Consensus 28 ~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~~----~---------G-----a~~v--i~~~~~~~~~ 87 (174)
T d1yb5a2 28 AGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVLQ----N---------G-----AHEV--FNHREVNYID 87 (174)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH----T---------T-----CSEE--EETTSTTHHH
T ss_pred CCCEEEEEeccccccccccccccccCcccccccccccccccccc----c---------C-----cccc--cccccccHHH
Confidence 45689999999999999999999999999999998876554322 1 2 1122 2555543333
Q ss_pred ---HHh--cCCCEEEEcccC
Q 013273 159 ---PAL--GNASVVICCIGA 173 (446)
Q Consensus 159 ---~a~--~~~D~VI~~Ag~ 173 (446)
+.. .++|+||++.|.
T Consensus 88 ~i~~~t~~~g~d~v~d~~g~ 107 (174)
T d1yb5a2 88 KIKKYVGEKGIDIIIEMLAN 107 (174)
T ss_dssp HHHHHHCTTCEEEEEESCHH
T ss_pred HhhhhhccCCceEEeecccH
Confidence 333 458999999863
|
| >d1u7za_ c.72.3.1 (A:) Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Coenzyme A biosynthesis bifunctional protein CoaBC, phosphopantothenoylcysteine synthase domain (CoaB) species: Escherichia coli [TaxId: 562]
Probab=97.60 E-value=0.00029 Score=63.13 Aligned_cols=169 Identities=11% Similarity=0.054 Sum_probs=90.9
Q ss_pred CCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC--hhcHHHHhcCC
Q 013273 87 GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK--RVQIEPALGNA 164 (446)
Q Consensus 87 GatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d--~~~~~~a~~~~ 164 (446)
-.||..|.+|+++|..+|++|+++.-.... .....+..+...-.+ .+.+.+.+..+
T Consensus 29 ~SSGk~G~aiA~~~~~~Ga~V~li~g~~~~----------------------~~p~~~~~~~~~t~~~m~~~~~~~~~~~ 86 (223)
T d1u7za_ 29 HSSGKMGFAIAAAAARRGANVTLVSGPVSL----------------------PTPPFVKRVDVMTALEMEAAVNASVQQQ 86 (223)
T ss_dssp CCCSHHHHHHHHHHHHTTCEEEEEECSCCC----------------------CCCTTEEEEECCSHHHHHHHHHHHGGGC
T ss_pred CCcHHHHHHHHHHHHHcCCchhhhhccccc----------------------CcccccccceehhhHHHHHHHHhhhccc
Confidence 357999999999999999999998865431 112456665543211 12333445789
Q ss_pred CEEEEcccCCCCccCCCC-----------CcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHH
Q 013273 165 SVVICCIGASEKEVFDIT-----------GPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLL 233 (446)
Q Consensus 165 D~VI~~Ag~~~~~~~~~~-----------~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~ 233 (446)
|++|++|+..+....... ..+.+++.-+..+++...+....+.+.++-..- . + ....++
T Consensus 87 D~~i~aAAvsDf~~~~~~~~k~Kk~~~~~~~l~L~L~~tpdIL~~l~~~k~~~~~~VGFaaE-t-~-------~l~~~A- 156 (223)
T d1u7za_ 87 NIFIGCAAVADYRAATVAPEKIKKQATQGDELTIKMVKNPDIVAGVAALKDHRPYVVGFAAE-T-N-------NVEEYA- 156 (223)
T ss_dssp SEEEECCBCCSEEESSCCSSCC-------CEEEEEEEECCCHHHHHHHCSSSCCEEEEEEEE-S-S-------SHHHHH-
T ss_pred eeEeeeechhhhhhhhhhhhhcccccccccccceeeecCHHHHHHHHhhccCCceEEEEeec-c-c-------chhhHH-
Confidence 999999997654222111 112233333445566665543333333433211 1 1 011122
Q ss_pred HHHHHHHHHHhCCCCEEEEecC----CccCCCcccccccceeecccCcccCCccCHHHHHHHHHHHH
Q 013273 234 WKRKAEEALIASGLPYTIVRPG----GMERPTDAYKETHNITLSQEDTLFGGQVSNLQVAELLACMA 296 (446)
Q Consensus 234 sK~~~E~~l~~~gl~~tivRPg----~v~gp~~~~~~~~~~~~~~~~~~~~~~v~~~DvA~ai~~ll 296 (446)
.+-+.+.|+++++.-.- ..||...+ ..+.+...........+=.++|+.|+..+
T Consensus 157 -----~~Kl~~K~~D~IvAN~v~~~~~~fgsd~n----~v~ii~~~~~~~~~~~sK~~iA~~Il~~I 214 (223)
T d1u7za_ 157 -----RQKRIRKNLDLICANDVSQPTQGFNSDNN----ALHLFWQDGDKVLPLERKELLGQLLLDEI 214 (223)
T ss_dssp -----HHHHHHHTCSEEEEEECSSTTSSTTSSEE----EEEEEETTEEEEEEEEEHHHHHHHHHHHH
T ss_pred -----HHHHHhcCCCEEEeecccCCCCCcCCCce----EEEEEECCCeEEcCCCCHHHHHHHHHHHH
Confidence 22356689999888642 23444321 12223222222223467788999888654
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=97.59 E-value=5.9e-05 Score=64.82 Aligned_cols=75 Identities=20% Similarity=0.293 Sum_probs=53.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|||+||+|.||...++.+...|.+|+++++++++.+.+.+ + | .+.+ .|..+....
T Consensus 26 ~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~~----l---------G------a~~~-i~~~~~~~~ 85 (171)
T d1iz0a2 26 RPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPLA----L---------G------AEEA-ATYAEVPER 85 (171)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHHH----T---------T------CSEE-EEGGGHHHH
T ss_pred CCCCEEEEEeccccchhhhhhhhcccccccccccccccccccccc----c---------c------ccee-eehhhhhhh
Confidence 456789999999999999999999999999999999887665432 1 2 1111 133332222
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
.....++|+||++.|
T Consensus 86 ~~~~~g~D~v~d~~G 100 (171)
T d1iz0a2 86 AKAWGGLDLVLEVRG 100 (171)
T ss_dssp HHHTTSEEEEEECSC
T ss_pred hhccccccccccccc
Confidence 233478999999876
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=97.59 E-value=0.0002 Score=60.00 Aligned_cols=75 Identities=11% Similarity=0.109 Sum_probs=61.4
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH-
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA- 160 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a- 160 (446)
+|+|.|. |-+|+.+++.|.+.|++|+++..++++.....+.... .++.++.||.+|++.++++
T Consensus 5 HiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~---------------~~~~vi~Gd~~d~~~L~~a~ 68 (153)
T d1id1a_ 5 HFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG---------------DNADVIPGDSNDSSVLKKAG 68 (153)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC---------------TTCEEEESCTTSHHHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhc---------------CCcEEEEccCcchHHHHHhc
Confidence 6899995 8999999999999999999999998765544333221 5789999999999998876
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
++.+|+||-+.+
T Consensus 69 i~~a~~vi~~~~ 80 (153)
T d1id1a_ 69 IDRCRAILALSD 80 (153)
T ss_dssp TTTCSEEEECSS
T ss_pred cccCCEEEEccc
Confidence 478999998753
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.54 E-value=6.7e-05 Score=62.90 Aligned_cols=36 Identities=19% Similarity=0.036 Sum_probs=29.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC----CeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G----~~V~~~~R~~~ 115 (446)
|++|.|.||||++|+.+++.|+++. .+++++.++..
T Consensus 1 MkkVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s 40 (146)
T d1t4ba1 1 MQNVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQL 40 (146)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSST
T ss_pred CcEEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccc
Confidence 4689999999999999999888764 46777776543
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=97.50 E-value=0.00048 Score=58.50 Aligned_cols=41 Identities=27% Similarity=0.246 Sum_probs=35.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+|+|+| +|.||...+..+...|.+|+++++++++.+.+
T Consensus 26 ~g~~vlV~G-~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a 66 (170)
T d1e3ja2 26 LGTTVLVIG-AGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA 66 (170)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCEEEEEc-ccccchhhHhhHhhhcccccccchHHHHHHHH
Confidence 456899998 79999999999999999999999999887654
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.46 E-value=8.4e-05 Score=64.13 Aligned_cols=75 Identities=21% Similarity=0.212 Sum_probs=53.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh---h
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR---V 155 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~---~ 155 (446)
.+.+|||+||+|.||..+++.+...|.+|+++++++++.+.+.+ . | --+++ |..+. +
T Consensus 25 ~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~~----~---------G-----a~~vi--~~~~~~~~~ 84 (183)
T d1pqwa_ 25 PGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLSR----L---------G-----VEYVG--DSRSVDFAD 84 (183)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHT----T---------C-----CSEEE--ETTCSTHHH
T ss_pred CCCEEEEECCCCCcccccchhhccccccceeeeccccccccccc----c---------c-----ccccc--cCCccCHHH
Confidence 45789999999999999999999999999999998877654321 1 1 11222 33443 3
Q ss_pred cHHHHh--cCCCEEEEcccC
Q 013273 156 QIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 156 ~~~~a~--~~~D~VI~~Ag~ 173 (446)
.+.+.. .++|+||++.|.
T Consensus 85 ~v~~~t~~~g~d~v~d~~g~ 104 (183)
T d1pqwa_ 85 EILELTDGYGVDVVLNSLAG 104 (183)
T ss_dssp HHHHHTTTCCEEEEEECCCT
T ss_pred HHHHHhCCCCEEEEEecccc
Confidence 333333 469999999873
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00011 Score=54.54 Aligned_cols=43 Identities=40% Similarity=0.448 Sum_probs=38.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
.+++|||+||+|.+|...++.+...|++|+++++++++.+.+.
T Consensus 31 ~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~ 73 (77)
T d1o8ca2 31 QDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (77)
T ss_dssp GGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH
Confidence 4568999999999999999999999999999999998876653
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=97.41 E-value=0.00015 Score=62.32 Aligned_cols=76 Identities=20% Similarity=0.279 Sum_probs=55.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-- 155 (446)
..+.+|||+||+|.+|..+++.+...|++|+++++++++.+.+.+ + | --++ .|..+.+
T Consensus 27 ~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~~----l---------G-----a~~v--i~~~~~d~~ 86 (179)
T d1qora2 27 KPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSALK----A---------G-----AWQV--INYREEDLV 86 (179)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHH----H---------T-----CSEE--EETTTSCHH
T ss_pred CCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHHh----c---------C-----CeEE--EECCCCCHH
Confidence 345799999999999999999999999999999999988765432 2 2 1122 2555533
Q ss_pred -cHHHHh--cCCCEEEEcccC
Q 013273 156 -QIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 156 -~~~~a~--~~~D~VI~~Ag~ 173 (446)
.+.++- .++|+|+++.|.
T Consensus 87 ~~v~~~t~g~g~d~v~d~~g~ 107 (179)
T d1qora2 87 ERLKEITGGKKVRVVYDSVGR 107 (179)
T ss_dssp HHHHHHTTTCCEEEEEECSCG
T ss_pred HHHHHHhCCCCeEEEEeCccH
Confidence 233333 357999999874
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.38 E-value=0.00016 Score=63.66 Aligned_cols=74 Identities=23% Similarity=0.251 Sum_probs=53.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc-----------
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC----------- 149 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~----------- 149 (446)
|+|.|.| .|++|..++..|++.|++|++++.+.++.+.+.+ | ...+.+-
T Consensus 1 MkI~ViG-lG~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln~--------------g-----~~p~~e~~~~~~l~~~~~ 60 (202)
T d1mv8a2 1 MRISIFG-LGYVGAVCAGCLSARGHEVIGVDVSSTKIDLINQ--------------G-----KSPIVEPGLEALLQQGRQ 60 (202)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHT--------------T-----CCSSCCTTHHHHHHHHHH
T ss_pred CEEEEEC-CCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhcc--------------c-----CCcccchhhhhhhhhhhc
Confidence 6799997 7999999999999999999999999887766542 1 0100010
Q ss_pred --CCCChhcHHHHhcCCCEEEEcccCC
Q 013273 150 --DLEKRVQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 150 --Dl~d~~~~~~a~~~~D~VI~~Ag~~ 174 (446)
.+.-..++.+++.++|++|-|.+..
T Consensus 61 ~~~~~~~~~~~~~i~~~d~i~i~VpTP 87 (202)
T d1mv8a2 61 TGRLSGTTDFKKAVLDSDVSFICVGTP 87 (202)
T ss_dssp TTCEEEESCHHHHHHTCSEEEECCCCC
T ss_pred ccccccCCCHHHHHhhCCEEEEecCcc
Confidence 1111244677788999999998754
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=97.35 E-value=0.00012 Score=63.24 Aligned_cols=43 Identities=35% Similarity=0.460 Sum_probs=38.4
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
.+.+|||+||+|++|...++.+...|.+|++.++++++.+.+.
T Consensus 31 ~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~ 73 (176)
T d1xa0a2 31 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR 73 (176)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH
T ss_pred CCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH
Confidence 4568999999999999999999999999999999998876653
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.33 E-value=0.00014 Score=60.69 Aligned_cols=94 Identities=19% Similarity=0.143 Sum_probs=57.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
.++|.|.||||++|+.|++.|.+++ .++..+..+.+. | ..+.+..-|+.-...
T Consensus 2 ~mnVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~--------------------G----k~i~~~~~~~~~~~~ 57 (144)
T d2hjsa1 2 PLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESA--------------------G----QRMGFAESSLRVGDV 57 (144)
T ss_dssp CCCEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTT--------------------T----CEEEETTEEEECEEG
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccC--------------------C----cceeeccccchhccc
Confidence 4689999999999999999998765 477776654332 1 122221111111111
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
-...+.++|++|.+++.. ....++..+.+.|. ++|-.|+..
T Consensus 58 ~~~~~~~~d~vf~a~p~~----------------~s~~~~~~~~~~g~-~VID~Ss~f 98 (144)
T d2hjsa1 58 DSFDFSSVGLAFFAAAAE----------------VSRAHAERARAAGC-SVIDLSGAL 98 (144)
T ss_dssp GGCCGGGCSEEEECSCHH----------------HHHHHHHHHHHTTC-EEEETTCTT
T ss_pred hhhhhccceEEEecCCcc----------------hhhhhccccccCCc-eEEeechhh
Confidence 112356789999887531 24455566666775 777777643
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.33 E-value=0.00053 Score=59.88 Aligned_cols=118 Identities=13% Similarity=0.133 Sum_probs=70.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCC-----ceEEEEcCCCCh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVE-----MLELVECDLEKR 154 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~-----~v~~v~~Dl~d~ 154 (446)
-++|.|.|| |.+|+.++..++..|++|++++++++..+...+.+++. ++... ..+..... ...-....+.-.
T Consensus 4 IkkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~~~i~~~-l~~~~-~~~~~~~~~~~~~~~~~~l~~i~~~ 80 (192)
T d1f0ya2 4 VKHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSKKGIEES-LRKVA-KKKFAENPKAGDEFVEKTLSTIATS 80 (192)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHHHH-HHHHH-HTTSSSCHHHHHHHHHHHHHTEEEE
T ss_pred eEEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHHhhHHHH-HHHHH-HhhhhccchhhHHHHHHHHhhcccc
Confidence 468999996 99999999999999999999999998776665555432 00000 00100000 000000011112
Q ss_pred hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 155 VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
.++.+++.++|.||-++.. |+..=+.+++...+.-....|+.|+.+
T Consensus 81 ~d~~~a~~~ad~ViEav~E--------------~l~~K~~v~~~l~~~~~~~~ilasnTS 126 (192)
T d1f0ya2 81 TDAASVVHSTDLVVEAIVE--------------NLKVKNELFKRLDKFAAEHTIFASNTS 126 (192)
T ss_dssp SCHHHHTTSCSEEEECCCS--------------CHHHHHHHHHHHTTTSCTTCEEEECCS
T ss_pred chhHhhhcccceehhhccc--------------chhHHHHHHHHHhhhcccCceeeccCc
Confidence 3467788999999999643 344455666666554333445555443
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=97.33 E-value=0.00037 Score=59.03 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=52.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|++|.|.| .|.+|+.+++.|+++||+|++.+|+.++.+.+... + . .......+
T Consensus 1 M~kIg~IG-lG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~~~-------------~------~-------~~~~~~~e 53 (162)
T d3cuma2 1 MKQIAFIG-LGHMGAPMATNLLKAGYLLNVFDLVQSAVDGLVAA-------------G------A-------SAARSARD 53 (162)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSSHHHHHHHHHT-------------T------C-------EECSSHHH
T ss_pred CCEEEEEE-EHHHHHHHHHHHHHCCCeEEEEECchhhhhhhhhh-------------h------c-------cccchhhh
Confidence 46899998 89999999999999999999999998877665431 1 1 11234678
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
++..+|+|+-+..
T Consensus 54 ~~~~~diii~~v~ 66 (162)
T d3cuma2 54 AVQGADVVISMLP 66 (162)
T ss_dssp HHTSCSEEEECCS
T ss_pred hccccCeeeeccc
Confidence 8899999998864
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=97.24 E-value=0.00025 Score=60.07 Aligned_cols=39 Identities=21% Similarity=0.205 Sum_probs=34.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
|+|.|.| .|.+|..+++.|.+.|++|++.+|+++..+..
T Consensus 1 MkI~iIG-~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a 39 (165)
T d2f1ka2 1 MKIGVVG-LGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA 39 (165)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CEEEEEe-ecHHHHHHHHHHHHCCCEEEEEECCchHHHHH
Confidence 6799998 59999999999999999999999998765543
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=97.23 E-value=0.0034 Score=49.41 Aligned_cols=95 Identities=23% Similarity=0.279 Sum_probs=67.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|||.| .|.+|.+-++.|++.|++|++++........ ... ...++.++..++.+.
T Consensus 10 l~~k~vlVvG-~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~--~~~---------------~~~~i~~~~~~~~~~--- 68 (113)
T d1pjqa1 10 LRDRDCLIVG-GGDVAERKARLLLEAGARLTVNALTFIPQFT--VWA---------------NEGMLTLVEGPFDET--- 68 (113)
T ss_dssp CBTCEEEEEC-CSHHHHHHHHHHHHTTBEEEEEESSCCHHHH--HHH---------------TTTSCEEEESSCCGG---
T ss_pred eCCCEEEEEC-CCHHHHHHHHHHHHCCCeEEEEeccCChHHH--HHH---------------hcCCceeeccCCCHH---
Confidence 5678999999 5999999999999999999999876653221 111 115788888777542
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSS 212 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS 212 (446)
-+.+++.||.+.+. -.-...+.+.|++.++ +|++..
T Consensus 69 --dl~~~~lv~~at~d---------------~~~n~~i~~~a~~~~i--lVNv~D 104 (113)
T d1pjqa1 69 --LLDSCWLAIAATDD---------------DTVNQRVSDAAESRRI--FCNVVD 104 (113)
T ss_dssp --GGTTCSEEEECCSC---------------HHHHHHHHHHHHHTTC--EEEETT
T ss_pred --HhCCCcEEeecCCC---------------HHHHHHHHHHHHHcCC--EEEeCC
Confidence 25678988876432 1224467788888765 788664
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=97.23 E-value=8.9e-05 Score=63.59 Aligned_cols=43 Identities=37% Similarity=0.443 Sum_probs=38.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
+.+|||+||+|++|...++.....|++|+++++++++.+.+.+
T Consensus 24 ~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~~ 66 (167)
T d1tt7a2 24 KGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLKQ 66 (167)
T ss_dssp GCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHHH
T ss_pred CCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHHh
Confidence 4469999999999999999998899999999999988776543
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=97.15 E-value=0.0012 Score=55.02 Aligned_cols=65 Identities=15% Similarity=0.105 Sum_probs=48.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.| .|.+|+.+++.|+++|++|++.+|+..+...+... . ..+ .++..++
T Consensus 1 MkIgiIG-~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~~~--~----------------------~~~--~~~~~e~ 53 (152)
T d1i36a2 1 LRVGFIG-FGEVAQTLASRLRSRGVEVVTSLEGRSPSTIERAR--T----------------------VGV--TETSEED 53 (152)
T ss_dssp CEEEEES-CSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHHHH--H----------------------HTC--EECCHHH
T ss_pred CEEEEEc-HHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHhhh--c----------------------ccc--cccHHHH
Confidence 5799998 79999999999999999999998887665543221 0 111 1235677
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+..+|+||-+..
T Consensus 54 ~~~~diIi~~v~ 65 (152)
T d1i36a2 54 VYSCPVVISAVT 65 (152)
T ss_dssp HHTSSEEEECSC
T ss_pred HhhcCeEEEEec
Confidence 899999998864
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=97.14 E-value=0.00034 Score=59.56 Aligned_cols=75 Identities=16% Similarity=0.180 Sum_probs=52.7
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC-ChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE-KRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~-d~~~~ 157 (446)
.+.+|+|.|+ |.||...+..+...|.+|+++++++++.+...+ + | . -+++ |.. +.+..
T Consensus 27 ~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~~----l---------G----a-~~~i--~~~~~~~~~ 85 (168)
T d1piwa2 27 PGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAMK----M---------G----A-DHYI--ATLEEGDWG 85 (168)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHHH----H---------T----C-SEEE--EGGGTSCHH
T ss_pred CCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhhc----c---------C----C-cEEe--eccchHHHH
Confidence 4568999996 999999998888889999999999988765432 2 2 1 1222 222 22333
Q ss_pred HHHhcCCCEEEEcccCC
Q 013273 158 EPALGNASVVICCIGAS 174 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~ 174 (446)
++..+++|+||.+.+..
T Consensus 86 ~~~~~~~d~vi~~~~~~ 102 (168)
T d1piwa2 86 EKYFDTFDLIVVCASSL 102 (168)
T ss_dssp HHSCSCEEEEEECCSCS
T ss_pred HhhhcccceEEEEecCC
Confidence 44557899999998753
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=97.12 E-value=0.00026 Score=59.59 Aligned_cols=35 Identities=29% Similarity=0.293 Sum_probs=32.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR 116 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~ 116 (446)
|+|+|.|+ |.+|..++..|++.|++|.+++|++.+
T Consensus 1 MkI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~ 35 (167)
T d1ks9a2 1 MKITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQP 35 (167)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCS
T ss_pred CEEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHH
Confidence 68999996 999999999999999999999998764
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=97.12 E-value=0.0017 Score=56.13 Aligned_cols=45 Identities=18% Similarity=0.083 Sum_probs=38.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVK 125 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~ 125 (446)
-++|.|.|| |.+|+.++..++..|++|++++++++..+...+.+.
T Consensus 4 I~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~~~i~ 48 (186)
T d1wdka3 4 VKQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGLAEAA 48 (186)
T ss_dssp CSSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHH
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhhhhhh
Confidence 357999996 999999999999999999999999887766555544
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=97.11 E-value=0.00012 Score=63.94 Aligned_cols=82 Identities=20% Similarity=0.153 Sum_probs=58.0
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhh-hcccccccCCCCCCceEEEEcCCCChh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMK-LDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~-l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
++.|++|.|.| +|-.|.+++..|.++|++|++.+|+++..+.+.+..+..+ +++. .-..++.+ ..
T Consensus 4 ~~~m~KI~ViG-aG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~~~n~~yl~~~------~l~~~i~~-------t~ 69 (189)
T d1n1ea2 4 LLYLNKAVVFG-SGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEKRENVLFLKGV------QLASNITF-------TS 69 (189)
T ss_dssp CCCEEEEEEEC-CSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHHTBCTTTSTTC------BCCTTEEE-------ES
T ss_pred cceeceEEEEC-CCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhccccccccccc------cccccccc-------ch
Confidence 45667899999 6999999999999999999999999888776654322111 1110 11123332 24
Q ss_pred cHHHHhcCCCEEEEccc
Q 013273 156 QIEPALGNASVVICCIG 172 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag 172 (446)
++++++.++|+||.+..
T Consensus 70 ~l~~a~~~ad~iiiavP 86 (189)
T d1n1ea2 70 DVEKAYNGAEIILFVIP 86 (189)
T ss_dssp CHHHHHTTCSCEEECSC
T ss_pred hhhhccCCCCEEEEcCc
Confidence 57888999999998764
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=97.11 E-value=0.00059 Score=56.95 Aligned_cols=93 Identities=18% Similarity=0.036 Sum_probs=55.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
|+|.|.||||++|+.|++.|+++. .++..++.+... | ....+..-++...+.
T Consensus 1 mKVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~--------------------g----k~~~~~~~~~~~~~~ 56 (147)
T d1mb4a1 1 MRVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIG--------------------V----PAPNFGKDAGMLHDA 56 (147)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCS--------------------S----BCCCSSSCCCBCEET
T ss_pred CEEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccc--------------------c----cccccCCcceeeecc
Confidence 589999999999999999988753 466665544321 1 001000011111111
Q ss_pred -HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC-EEEEEccc
Q 013273 157 -IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN-HFIMVSSL 213 (446)
Q Consensus 157 -~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~-r~V~vSS~ 213 (446)
-...+.++|+||.|.+.. -+..++..+.+.|.+ .+|=.|+.
T Consensus 57 ~~~~~~~~~DvvF~alp~~----------------~s~~~~~~l~~~g~~~~VIDlSsd 99 (147)
T d1mb4a1 57 FDIESLKQLDAVITCQGGS----------------YTEKVYPALRQAGWKGYWIDAAST 99 (147)
T ss_dssp TCHHHHTTCSEEEECSCHH----------------HHHHHHHHHHHTTCCSEEEESSST
T ss_pred cchhhhccccEEEEecCch----------------HHHHHhHHHHHcCCceEEEeCCcc
Confidence 124468899999997641 155667777777764 45555654
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=97.09 E-value=0.00024 Score=61.31 Aligned_cols=42 Identities=40% Similarity=0.452 Sum_probs=37.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+.+|||+||+|++|...++.+...|++|++++|++++.+.+.
T Consensus 32 ~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~ 73 (177)
T d1o89a2 32 DGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK 73 (177)
T ss_dssp GCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH
T ss_pred CCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH
Confidence 358999999999999999999999999999999998876543
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=97.08 E-value=0.00063 Score=57.74 Aligned_cols=75 Identities=17% Similarity=0.195 Sum_probs=56.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+|+|.|+ |.||...++.+...|+++++++++.++.+.+.+ + | --.+ .|..+.+..
T Consensus 29 ~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~~----l---------G-----ad~~--i~~~~~~~~ 87 (168)
T d1uufa2 29 GPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA----L---------G-----ADEV--VNSRNADEM 87 (168)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----H---------T-----CSEE--EETTCHHHH
T ss_pred CCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHhc----c---------C-----CcEE--EECchhhHH
Confidence 35678999985 999999999999999999999998887654322 2 2 1122 356666666
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
....+++|+||.+.|.
T Consensus 88 ~~~~~~~D~vid~~g~ 103 (168)
T d1uufa2 88 AAHLKSFDFILNTVAA 103 (168)
T ss_dssp HTTTTCEEEEEECCSS
T ss_pred HHhcCCCceeeeeeec
Confidence 6666889999999875
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=97.07 E-value=0.00037 Score=58.92 Aligned_cols=65 Identities=17% Similarity=0.232 Sum_probs=52.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|-|.| .|.+|+.+++.|+++||+|++.+|++++.+.+.+ ..... ..+.+++
T Consensus 1 MkIgiIG-lG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~~-------------------~~~~~-------~~~~~e~ 53 (161)
T d1vpda2 1 MKVGFIG-LGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVIA-------------------AGAET-------ASTAKAI 53 (161)
T ss_dssp CEEEEEC-CSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHH-------------------TTCEE-------CSSHHHH
T ss_pred CEEEEEe-hhHHHHHHHHHHHHCCCeEEEEeCCcchhHHHHH-------------------hhhhh-------cccHHHH
Confidence 5799999 7999999999999999999999999988776543 11221 2346777
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+..+|+||-|..
T Consensus 54 ~~~~d~ii~~v~ 65 (161)
T d1vpda2 54 AEQCDVIITMLP 65 (161)
T ss_dssp HHHCSEEEECCS
T ss_pred HhCCCeEEEEcC
Confidence 888999999864
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.06 E-value=0.0026 Score=53.83 Aligned_cols=76 Identities=24% Similarity=0.281 Sum_probs=53.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.+|+|.|+ |.||...+..+...|. +|+++++++.+.+...+ + | --.++..+-.+....
T Consensus 26 ~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~~----~---------G-----a~~~~~~~~~~~~~~ 86 (171)
T d1pl8a2 26 LGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE----I---------G-----ADLVLQISKESPQEI 86 (171)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH----T---------T-----CSEEEECSSCCHHHH
T ss_pred CCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHHH----h---------C-----Ccccccccccccccc
Confidence 4568999986 9999999999999997 79999999887765332 1 1 112333333444444
Q ss_pred HHHh-----cCCCEEEEcccC
Q 013273 158 EPAL-----GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~-----~~~D~VI~~Ag~ 173 (446)
.+.+ .++|+||.+.|.
T Consensus 87 ~~~~~~~~g~g~Dvvid~~G~ 107 (171)
T d1pl8a2 87 ARKVEGQLGCKPEVTIECTGA 107 (171)
T ss_dssp HHHHHHHHTSCCSEEEECSCC
T ss_pred cccccccCCCCceEEEeccCC
Confidence 4433 468999999875
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=97.01 E-value=0.0013 Score=56.41 Aligned_cols=42 Identities=24% Similarity=0.140 Sum_probs=35.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
..+.+|||+|+ |.||...+..+...|+ +|+++++++++.+.+
T Consensus 27 ~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a 69 (182)
T d1vj0a2 27 FAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLA 69 (182)
T ss_dssp CBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH
T ss_pred CCCCEEEEECC-Cccchhheeccccccccccccccccccccccc
Confidence 34578999996 9999999999999997 799999999877644
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=97.00 E-value=0.00079 Score=54.55 Aligned_cols=69 Identities=19% Similarity=0.205 Sum_probs=56.4
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
+.|+|.| -|-+|+.+++.| +|++|+++..+++....+.. .++.++.||.+|++.++++
T Consensus 1 kHivI~G-~g~~g~~l~~~L--~~~~i~vi~~d~~~~~~~~~-------------------~~~~~i~Gd~~~~~~L~~a 58 (129)
T d2fy8a1 1 RHVVICG-WSESTLECLREL--RGSEVFVLAEDENVRKKVLR-------------------SGANFVHGDPTRVSDLEKA 58 (129)
T ss_dssp CCEEEES-CCHHHHHHHHTS--CGGGEEEEESCTTHHHHHHH-------------------TTCEEEESCTTSHHHHHHT
T ss_pred CEEEEEC-CCHHHHHHHHHH--cCCCCEEEEcchHHHHHHHh-------------------cCccccccccCCHHHHHHh
Confidence 3588998 589999999999 46788999998887665432 5689999999999988876
Q ss_pred -hcCCCEEEEcc
Q 013273 161 -LGNASVVICCI 171 (446)
Q Consensus 161 -~~~~D~VI~~A 171 (446)
+..++.||-+.
T Consensus 59 ~i~~A~~vi~~~ 70 (129)
T d2fy8a1 59 NVRGARAVIVNL 70 (129)
T ss_dssp TCTTCSEEEECC
T ss_pred hhhcCcEEEEec
Confidence 57899999764
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=96.99 E-value=0.002 Score=55.00 Aligned_cols=41 Identities=20% Similarity=0.280 Sum_probs=37.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
.+|-|.| .|.+|..+++.|+++||+|++.+|++++.+.+.+
T Consensus 3 ~nIg~IG-lG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~~ 43 (176)
T d2pgda2 3 ADIALIG-LAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFLA 43 (176)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHHH
T ss_pred CcEEEEe-EhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHH
Confidence 4699999 7999999999999999999999999998887654
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.97 E-value=0.00076 Score=56.44 Aligned_cols=65 Identities=17% Similarity=0.257 Sum_probs=51.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.+.| +|.+|+++++.|++.|++|++..|+.++..++.+++ | +.+ ..+.+++
T Consensus 1 MkIg~IG-~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~------------g------~~~-------~~~~~~~ 54 (152)
T d2ahra2 1 MKIGIIG-VGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQL------------A------LPY-------AMSHQDL 54 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHH------------T------CCB-------CSSHHHH
T ss_pred CEEEEEe-ccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhcccc------------c------eee-------echhhhh
Confidence 5799998 899999999999999999999999988877665432 1 111 1346777
Q ss_pred hcCCCEEEEcc
Q 013273 161 LGNASVVICCI 171 (446)
Q Consensus 161 ~~~~D~VI~~A 171 (446)
++++|+||-+.
T Consensus 55 ~~~~dvIilav 65 (152)
T d2ahra2 55 IDQVDLVILGI 65 (152)
T ss_dssp HHTCSEEEECS
T ss_pred hhccceeeeec
Confidence 88999999775
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=96.90 E-value=0.0014 Score=56.44 Aligned_cols=80 Identities=23% Similarity=0.248 Sum_probs=51.7
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPA 160 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a 160 (446)
|+|.|.| +|-.|.+++..|+++|++|++..|..+. +..+.+... +....-...+...++.-..+++++
T Consensus 1 MkI~ViG-aG~~GtalA~~la~~g~~V~l~~r~~~~--~~~~~i~~~---------~~~~~~~~~~~~~~i~~~~~~~~~ 68 (180)
T d1txga2 1 MIVSILG-AGAMGSALSVPLVDNGNEVRIWGTEFDT--EILKSISAG---------REHPRLGVKLNGVEIFWPEQLEKC 68 (180)
T ss_dssp CEEEEES-CCHHHHHHHHHHHHHCCEEEEECCGGGH--HHHHHHHTT---------CCBTTTTBCCCSEEEECGGGHHHH
T ss_pred CEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEecccH--HHHHHHhhh---------hhhhhhcchhccccccccccHHHH
Confidence 6899999 5999999999999999999999986543 112222211 000000111111122235668899
Q ss_pred hcCCCEEEEccc
Q 013273 161 LGNASVVICCIG 172 (446)
Q Consensus 161 ~~~~D~VI~~Ag 172 (446)
+.++|+||.+..
T Consensus 69 ~~~ad~Ii~avp 80 (180)
T d1txga2 69 LENAEVVLLGVS 80 (180)
T ss_dssp HTTCSEEEECSC
T ss_pred Hhccchhhcccc
Confidence 999999998764
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=96.88 E-value=0.00061 Score=56.80 Aligned_cols=39 Identities=23% Similarity=0.239 Sum_probs=35.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR 116 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~ 116 (446)
..+++|.|.||.|.+|+.+++.|.++||+|++.+|+...
T Consensus 7 ~~~~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~ 45 (152)
T d2pv7a2 7 SDIHKIVIVGGYGKLGGLFARYLRASGYPISILDREDWA 45 (152)
T ss_dssp TTCCCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGG
T ss_pred CCCCeEEEEcCCCHHHHHHHHHHHHcCCCcEeccccccc
Confidence 456799999999999999999999999999999997653
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=96.86 E-value=0.0043 Score=52.65 Aligned_cols=43 Identities=16% Similarity=0.111 Sum_probs=35.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV 121 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~ 121 (446)
..+.+|+|.|+ |++|...+..+...| .+|+++++++++.+...
T Consensus 27 k~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~ 70 (176)
T d2jhfa2 27 TQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK 70 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH
Confidence 45678999998 779999999999998 58899999998876543
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=96.86 E-value=0.0012 Score=56.11 Aligned_cols=44 Identities=20% Similarity=0.377 Sum_probs=38.0
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~ 123 (446)
.+++|+|.| +|+.|++++..|.+.|. +|.++.|+.++.+.+.+.
T Consensus 16 ~~~~vlIlG-aGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~ 60 (167)
T d1npya1 16 KNAKVIVHG-SGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAAL 60 (167)
T ss_dssp TTSCEEEEC-SSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHH
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHh
Confidence 356899999 59999999999999995 899999999988877553
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=96.84 E-value=0.0011 Score=57.36 Aligned_cols=48 Identities=23% Similarity=0.296 Sum_probs=39.0
Q ss_pred CCEEEE-ECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHh
Q 013273 80 DNLAFV-AGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQM 127 (446)
Q Consensus 80 ~~~VlV-tGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~ 127 (446)
+.+++| +||+|.+|...++.+...|.+|++++|+.++.++..+.++++
T Consensus 29 g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~~l 77 (189)
T d1gu7a2 29 GKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKEL 77 (189)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHHHH
T ss_pred CCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhhhc
Confidence 345666 599999999999999889999999999988777666666554
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=96.82 E-value=0.0017 Score=51.34 Aligned_cols=68 Identities=13% Similarity=0.150 Sum_probs=54.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
...+|.|.| +|.+|+-++.+..+.|++|++++.+++..... ---+++.+|+.|.+.+.
T Consensus 10 ~~~kigIlG-gGQL~rMla~aA~~lG~~v~v~d~~~~~PA~~---------------------va~~~i~~~~~d~~~l~ 67 (111)
T d1kjqa2 10 AATRVMLLG-SGELGKEVAIECQRLGVEVIAVDRYADAPAMH---------------------VAHRSHVINMLDGDALR 67 (111)
T ss_dssp TCCEEEEES-CSHHHHHHHHHHHTTTCEEEEEESSTTCGGGG---------------------GSSEEEECCTTCHHHHH
T ss_pred CCCEEEEEe-CCHHHHHHHHHHHHCCCEEEEEcCCCCCchhh---------------------cCCeEEECCCCCHHHHH
Confidence 345899999 69999999999999999999999887532210 12367889999999998
Q ss_pred HHhc--CCCEEE
Q 013273 159 PALG--NASVVI 168 (446)
Q Consensus 159 ~a~~--~~D~VI 168 (446)
+... .+|+|.
T Consensus 68 ~~~~~~~~DviT 79 (111)
T d1kjqa2 68 RVVELEKPHYIV 79 (111)
T ss_dssp HHHHHHCCSEEE
T ss_pred HHHHhhCCceEE
Confidence 8774 579884
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.79 E-value=0.00088 Score=57.45 Aligned_cols=47 Identities=23% Similarity=0.323 Sum_probs=41.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQ 126 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~ 126 (446)
.++++|+|.| +|+.++.++..|.+.| +|+++.|+.++.+.+.+.+..
T Consensus 16 ~~~k~vlIlG-aGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~ 62 (177)
T d1nvta1 16 VKDKNIVIYG-AGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAE 62 (177)
T ss_dssp CCSCEEEEEC-CSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHH
T ss_pred cCCCEEEEEC-CcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHH
Confidence 4678999999 6999999999998777 999999999999988877754
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=96.75 E-value=0.0034 Score=52.92 Aligned_cols=77 Identities=14% Similarity=0.138 Sum_probs=51.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh-hc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-VQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-~~ 156 (446)
.+.+|+|+|++|.+|..++..+...| .+|+++++++.+.+.+.+ + | --+++..+-.|. +.
T Consensus 27 ~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~~----~---------G-----a~~~i~~~~~~~~~~ 88 (170)
T d1jvba2 27 PTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAKR----A---------G-----ADYVINASMQDPLAE 88 (170)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHHH----H---------T-----CSEEEETTTSCHHHH
T ss_pred CCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHHH----c---------C-----CceeeccCCcCHHHH
Confidence 45689999999999999999999888 588999988877655432 1 1 113333332222 22
Q ss_pred HHHHh--cCCCEEEEcccC
Q 013273 157 IEPAL--GNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~--~~~D~VI~~Ag~ 173 (446)
+.+.. +++|+||+|+|.
T Consensus 89 ~~~~~~~~~~d~vid~~g~ 107 (170)
T d1jvba2 89 IRRITESKGVDAVIDLNNS 107 (170)
T ss_dssp HHHHTTTSCEEEEEESCCC
T ss_pred HHHHhhcccchhhhccccc
Confidence 22222 458999999875
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=96.66 E-value=0.0028 Score=53.67 Aligned_cols=75 Identities=23% Similarity=0.301 Sum_probs=60.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.-+|+|.| .|-.|..-++.+...|.+|++++++.++.+++...+. ..++.. ..+.+.+++
T Consensus 32 pa~V~ViG-aGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~----------------~~~~~~---~~~~~~l~~ 91 (168)
T d1pjca1 32 PGKVVILG-GGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFG----------------SRVELL---YSNSAEIET 91 (168)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHG----------------GGSEEE---ECCHHHHHH
T ss_pred CcEEEEEC-CChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhc----------------ccceee---hhhhhhHHH
Confidence 45899999 5999999999999999999999999998877654332 234443 345778899
Q ss_pred HhcCCCEEEEcccCC
Q 013273 160 ALGNASVVICCIGAS 174 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~ 174 (446)
.+..+|+||.++=..
T Consensus 92 ~~~~aDivI~aalip 106 (168)
T d1pjca1 92 AVAEADLLIGAVLVP 106 (168)
T ss_dssp HHHTCSEEEECCCCT
T ss_pred hhccCcEEEEeeecC
Confidence 999999999998653
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=96.66 E-value=0.0092 Score=50.61 Aligned_cols=42 Identities=21% Similarity=0.333 Sum_probs=38.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQS 123 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~ 123 (446)
|+|-|.| .|.+|..+++.|+++||+|++.+|++++...+.+.
T Consensus 2 MkIGvIG-lG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~ 43 (178)
T d1pgja2 2 MDVGVVG-LGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKA 43 (178)
T ss_dssp BSEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHH
T ss_pred CEEEEEe-ehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHc
Confidence 5699998 89999999999999999999999999998877653
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.65 E-value=0.0017 Score=56.03 Aligned_cols=75 Identities=20% Similarity=0.192 Sum_probs=48.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh---
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV--- 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~--- 155 (446)
..+|||+||+|.||...++.+...|.++++ ++++.++...+.+.+ +--.++ |..+.+
T Consensus 31 ~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~-----------------gad~vi--~~~~~~~~~ 91 (187)
T d1vj1a2 31 NQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSEL-----------------GFDAAV--NYKTGNVAE 91 (187)
T ss_dssp CCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHS-----------------CCSEEE--ETTSSCHHH
T ss_pred CCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcc-----------------cceEEe--eccchhHHH
Confidence 368999999999999999999889976544 566665555443321 112232 444322
Q ss_pred cHHHHh-cCCCEEEEcccC
Q 013273 156 QIEPAL-GNASVVICCIGA 173 (446)
Q Consensus 156 ~~~~a~-~~~D~VI~~Ag~ 173 (446)
.++++. +++|+||++.|.
T Consensus 92 ~~~~~~~~GvDvv~D~vGg 110 (187)
T d1vj1a2 92 QLREACPGGVDVYFDNVGG 110 (187)
T ss_dssp HHHHHCTTCEEEEEESSCH
T ss_pred HHHHHhccCceEEEecCCc
Confidence 222222 469999999873
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.61 E-value=0.0037 Score=47.41 Aligned_cols=90 Identities=18% Similarity=0.161 Sum_probs=60.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++++|+|.|. |..|..+++.|.+.|++|++.+.+...... + . -...+.+..+++.
T Consensus 3 ~~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~~~~~--~---~-------------~~~~~~~~~~~~~----- 58 (93)
T d2jfga1 3 YQGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMTPPGL--D---K-------------LPEAVERHTGSLN----- 58 (93)
T ss_dssp CTTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSSCTTG--G---G-------------SCTTSCEEESBCC-----
T ss_pred cCCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcCchhH--H---H-------------Hhhccceeecccc-----
Confidence 46788999996 889999999999999999999986542110 0 0 0123444444432
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEE
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFI 208 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V 208 (446)
...+.++|.||-.-|.... ..+++.|+++|+ .+|
T Consensus 59 ~~~~~~~d~vi~SPGi~~~----------------~~~~~~a~~~gi-~ii 92 (93)
T d2jfga1 59 DEWLMAADLIVASPGIALA----------------HPSLSAAADAGI-EIV 92 (93)
T ss_dssp HHHHHHCSEEEECTTSCTT----------------SHHHHHHHHTTC-EEE
T ss_pred hhhhccCCEEEECCCCCCC----------------CHHHHHHHHcCC-CeE
Confidence 2345678999998776431 246777888887 443
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=96.61 E-value=0.00096 Score=57.39 Aligned_cols=32 Identities=19% Similarity=0.207 Sum_probs=27.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEE
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV 111 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~ 111 (446)
|++|.|.||||++|+.|++.|.++ .++|..+.
T Consensus 1 MikVaIiGATGyvG~eLlrlL~~HP~~ei~~l~ 33 (179)
T d2g17a1 1 MLNTLIVGASGYAGAELVSYVNRHPHMTITALT 33 (179)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTEEEEEEE
T ss_pred CcEEEEECcccHHHHHHHHHHHhCCCCceEeeE
Confidence 578999999999999999999998 56775543
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=96.60 E-value=0.0054 Score=52.21 Aligned_cols=41 Identities=20% Similarity=0.092 Sum_probs=33.7
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAEN 119 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~ 119 (446)
..+.+|+|+| .|.||...+..+...|+ +|++.++++.+.+.
T Consensus 27 ~~G~~VlV~G-~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~ 68 (174)
T d1e3ia2 27 TPGSTCAVFG-LGCVGLSAIIGCKIAGASRIIAIDINGEKFPK 68 (174)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHHTTCSEEEEECSCGGGHHH
T ss_pred CCCCEEEEEC-CChHHHHHHHHHHHhCCceeeeeccchHHHHH
Confidence 3456899998 59999999999999997 67778888877544
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=96.39 E-value=0.011 Score=51.20 Aligned_cols=75 Identities=23% Similarity=0.232 Sum_probs=50.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh--
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR-- 154 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~-- 154 (446)
..+.+|+|.|+ |.||...+..+...|. +|+++++++++.+...+ -+.+.+. |-.+.
T Consensus 24 ~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~~-------------------~Ga~~~~-~~~~~~~ 82 (195)
T d1kola2 24 GPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA-------------------QGFEIAD-LSLDTPL 82 (195)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH-------------------TTCEEEE-TTSSSCH
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhhh-------------------ccccEEE-eCCCcCH
Confidence 45679999985 9999888888877885 78888888877665432 1233332 33322
Q ss_pred -hcHHHHh--cCCCEEEEcccC
Q 013273 155 -VQIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 155 -~~~~~a~--~~~D~VI~~Ag~ 173 (446)
+.+.++. .++|++|.+.|.
T Consensus 83 ~~~i~~~t~g~g~D~vid~vG~ 104 (195)
T d1kola2 83 HEQIAALLGEPEVDCAVDAVGF 104 (195)
T ss_dssp HHHHHHHHSSSCEEEEEECCCT
T ss_pred HHHHHHHhCCCCcEEEEECccc
Confidence 2333433 368999999984
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.34 E-value=0.015 Score=49.34 Aligned_cols=42 Identities=21% Similarity=0.178 Sum_probs=36.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l 120 (446)
..+.+|+|+|+ |.+|...+..+...| .+|+++++++++.+..
T Consensus 28 ~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A 70 (176)
T d1d1ta2 28 KPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA 70 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHH
Confidence 45668999985 999999999999999 5899999999887654
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=96.32 E-value=0.0016 Score=56.17 Aligned_cols=36 Identities=28% Similarity=0.380 Sum_probs=29.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS 113 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~ 113 (446)
.++.+|.|.||||++|+.|++.|.++- +++..+..+
T Consensus 3 ~~kikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~ 39 (183)
T d2cvoa1 3 GEEVRIAVLGASGYTGAEIVRLLANHPQFRIKVMTAD 39 (183)
T ss_dssp SSCEEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECS
T ss_pred CCccEEEEECcccHHHHHHHHHHHhCCCceEEEEecc
Confidence 456689999999999999999999874 677666543
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=96.31 E-value=0.0072 Score=50.57 Aligned_cols=42 Identities=19% Similarity=0.211 Sum_probs=36.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
..+.+|+|.|+ |.||...+..+...|++|+++++++.+.+..
T Consensus 26 ~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a 67 (166)
T d1llua2 26 RPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELA 67 (166)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHH
T ss_pred CCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhh
Confidence 34678999985 9999999999988999999999998877654
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=96.30 E-value=0.006 Score=49.33 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=27.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEE
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAG 110 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~ 110 (446)
|+|.|.|++|..|+.|.+.+.++|++++..
T Consensus 1 mki~i~G~~GrMG~~i~~~~~~~~~~l~~~ 30 (128)
T d1vm6a3 1 MKYGIVGYSGRMGQEIQKVFSEKGHELVLK 30 (128)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHhcCCCeEEEE
Confidence 579999999999999999999999988754
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.28 E-value=0.0068 Score=50.97 Aligned_cols=69 Identities=20% Similarity=0.222 Sum_probs=53.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+|+|+|.| .|.||+.+++.|...|.+|++...++-++-+. . .|-.....
T Consensus 21 ~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A--~-------------------------~dG~~v~~ 72 (163)
T d1li4a1 21 MIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQA--A-------------------------MEGYEVTT 72 (163)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH--H-------------------------HTTCEECC
T ss_pred eecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHh--h-------------------------cCceEeee
Confidence 46789999999 89999999999999999999999987543221 1 11122234
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+++++...|+||-+.|.
T Consensus 73 ~~~a~~~adivvtaTGn 89 (163)
T d1li4a1 73 MDEACQEGNIFVTTTGC 89 (163)
T ss_dssp HHHHTTTCSEEEECSSC
T ss_pred hhhhhhhccEEEecCCC
Confidence 77888889999988774
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=96.27 E-value=0.0096 Score=50.39 Aligned_cols=75 Identities=17% Similarity=0.142 Sum_probs=48.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeE-EEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh-
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRV-RAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV- 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V-~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~- 155 (446)
..+.+|+|.|+ |.||...+..+...|.++ ++.++++.+.+.+.+ + +-.+++ |..+.+
T Consensus 27 ~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~~----~--------------Ga~~~i--~~~~~~~ 85 (174)
T d1f8fa2 27 TPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAKQ----L--------------GATHVI--NSKTQDP 85 (174)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHH----H--------------TCSEEE--ETTTSCH
T ss_pred CCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHHH----c--------------CCeEEE--eCCCcCH
Confidence 34568999996 999999999998888755 556667766554322 1 222344 333322
Q ss_pred --cHHHHh-cCCCEEEEcccC
Q 013273 156 --QIEPAL-GNASVVICCIGA 173 (446)
Q Consensus 156 --~~~~a~-~~~D~VI~~Ag~ 173 (446)
.++++. +++|+||.|.|.
T Consensus 86 ~~~i~~~t~gg~D~vid~~G~ 106 (174)
T d1f8fa2 86 VAAIKEITDGGVNFALESTGS 106 (174)
T ss_dssp HHHHHHHTTSCEEEEEECSCC
T ss_pred HHHHHHHcCCCCcEEEEcCCc
Confidence 222332 468999999885
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=96.26 E-value=0.0019 Score=54.09 Aligned_cols=24 Identities=33% Similarity=0.483 Sum_probs=22.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF 105 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~ 105 (446)
+|.|.||||++|..|++.|.++.+
T Consensus 3 kVaIvGATGyvG~eLirlL~~H~f 26 (154)
T d2gz1a1 3 TVAVVGATGAVGAQMIKMLEESTL 26 (154)
T ss_dssp EEEEETTTSHHHHHHHHHHHTCCS
T ss_pred EEEEECCCcHHHHHHHHHHHcCCC
Confidence 799999999999999999988864
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=96.24 E-value=0.0017 Score=55.76 Aligned_cols=35 Identities=26% Similarity=0.106 Sum_probs=28.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~ 114 (446)
|++|.|.||||++|+.|++.|.++- .++..+..+.
T Consensus 1 MikVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~ 36 (176)
T d1vkna1 1 MIRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRT 36 (176)
T ss_dssp CEEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECST
T ss_pred CeEEEEECCCcHHHHHHHHHHHhCCCceEEEeeccc
Confidence 4689999999999999999999874 6776665443
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=96.22 E-value=0.0066 Score=52.09 Aligned_cols=65 Identities=25% Similarity=0.348 Sum_probs=51.6
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|.+|++.+|.... .+..-.+++
T Consensus 40 l~gk~vgIiG-~G~IG~~va~~l~~~g~~v~~~d~~~~~--------------------------------~~~~~~~~l 86 (181)
T d1qp8a1 40 IQGEKVAVLG-LGEIGTRVGKILAALGAQVRGFSRTPKE--------------------------------GPWRFTNSL 86 (181)
T ss_dssp CTTCEEEEES-CSTHHHHHHHHHHHTTCEEEEECSSCCC--------------------------------SSSCCBSCS
T ss_pred ccCceEEEec-cccccccceeeeeccccccccccccccc--------------------------------cceeeeech
Confidence 5678999999 7999999999999999999999987532 111112468
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++..+|+|+.+.....
T Consensus 87 ~ell~~sDiv~~~~pl~~ 104 (181)
T d1qp8a1 87 EEALREARAAVCALPLNK 104 (181)
T ss_dssp HHHHTTCSEEEECCCCST
T ss_pred hhhhhccchhhccccccc
Confidence 899999999999876543
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=96.19 E-value=0.0038 Score=53.19 Aligned_cols=74 Identities=18% Similarity=0.116 Sum_probs=50.6
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh---
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR--- 154 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~--- 154 (446)
.+.+|+|.|+ |.||...+..+...|+ +|+++++++.+.+...+ + | -.+++ |..+.
T Consensus 27 ~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~~----l---------G-----a~~~i--~~~~~~~~ 85 (174)
T d1jqba2 27 MGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKF----Y---------G-----ATDIL--NYKNGHIE 85 (174)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHHH----H---------T-----CSEEE--CGGGSCHH
T ss_pred CCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHHh----h---------C-----ccccc--cccchhHH
Confidence 4567999985 9999999999998996 79999998877655432 2 2 12222 33332
Q ss_pred hcHHHHh--cCCCEEEEcccC
Q 013273 155 VQIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 155 ~~~~~a~--~~~D~VI~~Ag~ 173 (446)
+.+.+.. .++|+||.++|.
T Consensus 86 ~~v~~~t~g~G~D~vid~~g~ 106 (174)
T d1jqba2 86 DQVMKLTNGKGVDRVIMAGGG 106 (174)
T ss_dssp HHHHHHTTTSCEEEEEECSSC
T ss_pred HHHHHHhhccCcceEEEccCC
Confidence 2333443 358999999986
|
| >d1obba1 c.2.1.5 (A:2-172) Alpha-glucosidase AglA {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Alpha-glucosidase AglA species: Thermotoga maritima [TaxId: 2336]
Probab=96.13 E-value=0.011 Score=50.06 Aligned_cols=117 Identities=14% Similarity=0.122 Sum_probs=70.7
Q ss_pred CCEEEEECCCcHHHHH--HHHHHHHC----CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 80 DNLAFVAGATGKVGSR--TVRELLKL----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~--lv~~L~~~----G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
.|||.|.|| |.+|.. ++..|+.. +.++++++.++++++.....++...-.. + ...++..
T Consensus 2 ~mKI~iIGa-Gsvg~t~~~~~~l~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~-----~----~~~~i~~----- 66 (171)
T d1obba1 2 SVKIGIIGA-GSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERLDAILTIAKKYVEEV-----G----ADLKFEK----- 66 (171)
T ss_dssp CCEEEEETT-TCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHHHHHHHHHHHHHHHT-----T----CCCEEEE-----
T ss_pred CcEEEEECC-CHHHhHHHHHHHHHhccccCCCEEEEEeCCchHHHHHHHHHHHHHHhc-----C----CCeEEEE-----
Confidence 468999996 888865 34445543 4699999999988776544444321110 0 2233332
Q ss_pred hhcHHHHhcCCCEEEEcccCCCCcc---------------------CCC---CC--cccchHHHHHHHHHHHHhCCCC-E
Q 013273 154 RVQIEPALGNASVVICCIGASEKEV---------------------FDI---TG--PYRIDFQATKNLVDAATIAKVN-H 206 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~~~~---------------------~~~---~~--~~~vNv~g~~~l~~aa~~~~v~-r 206 (446)
..+..+++.++|+||+.++...... .+. .. ...-|+.-...+++..++...+ .
T Consensus 67 ~td~~eaL~dad~Vv~~~~~g~~~~~~~~~~i~~~~g~~~~~~~~~~~~~g~~~~~~~~rn~~i~~~i~~~i~~~~p~a~ 146 (171)
T d1obba1 67 TMNLDDVIIDADFVINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAW 146 (171)
T ss_dssp ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCE
T ss_pred eCChhhcccCCCeEeeecccccccceeeehhcchhhhhccCCCccccCCCCCcceeeecchHHHHHHHHHHHHHHCcCeE
Confidence 2347788999999999987643210 000 00 0123777788888888877544 4
Q ss_pred EEEEc
Q 013273 207 FIMVS 211 (446)
Q Consensus 207 ~V~vS 211 (446)
||++|
T Consensus 147 ~i~~T 151 (171)
T d1obba1 147 YLQAA 151 (171)
T ss_dssp EEECS
T ss_pred EEEEC
Confidence 44444
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=96.12 E-value=0.0075 Score=50.83 Aligned_cols=41 Identities=17% Similarity=0.143 Sum_probs=31.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAEN 119 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~ 119 (446)
..+.+|+|.|+ |++|...+..+...|. .|++.++++.+.+.
T Consensus 27 ~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ 68 (176)
T d2fzwa2 27 EPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFAR 68 (176)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHH
T ss_pred CCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHH
Confidence 34678999997 6899999999999995 56666677766544
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=96.11 E-value=0.0057 Score=51.43 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=34.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC--eEEEEEcCchhHHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF--RVRAGVRSVQRAENLV 121 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~--~V~~~~R~~~~~~~l~ 121 (446)
|++|+|.| .|.+|..+++.|.+.|+ +|++.+|+++..+.+.
T Consensus 1 Mk~I~IIG-~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~ 43 (171)
T d2g5ca2 1 MQNVLIVG-VGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV 43 (171)
T ss_dssp CCEEEEES-CSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH
T ss_pred CCEEEEEc-cCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH
Confidence 46799998 69999999999999995 7888888887665543
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=96.04 E-value=0.033 Score=49.59 Aligned_cols=106 Identities=12% Similarity=0.231 Sum_probs=70.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKG 137 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g 137 (446)
....+|+|.| .|++|.+++..|++.|. ++++++.+ ..|...+.+.+++.
T Consensus 28 L~~~~VliiG-~GglGs~va~~La~~Gvg~i~lvD~D~Ve~sNL~RQ~l~~~~diG~~K~~~a~~~l~~~---------- 96 (247)
T d1jw9b_ 28 LKDSRVLIVG-LGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRI---------- 96 (247)
T ss_dssp HHHCEEEEEC-CSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH----------
T ss_pred HhCCCEEEEC-CCHHHHHHHHHHHHcCCCeEEEECCcccchhhhhhhccccHhhcCchHHHHHHHHHHHh----------
Confidence 3456899999 69999999999999995 77877743 23555566656554
Q ss_pred CCCCCceEEEEcCCC-ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccc
Q 013273 138 IQPVEMLELVECDLE-KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSL 213 (446)
Q Consensus 138 ~~~~~~v~~v~~Dl~-d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~ 213 (446)
.+.+.+...+.. +.......+...|+||.+.. |...-..+-++|.+++. .+|+.+..
T Consensus 97 ---np~~~i~~~~~~~~~~~~~~~~~~~divid~~d---------------~~~~~~~in~~~~~~~i-p~i~g~~~ 154 (247)
T d1jw9b_ 97 ---NPHIAITPVNALLDDAELAALIAEHDLVLDCTD---------------NVAVRNQLNAGCFAAKV-PLVSGAAI 154 (247)
T ss_dssp ---CTTSEEEEECSCCCHHHHHHHHHTSSEEEECCS---------------SHHHHHHHHHHHHHHTC-CEEEEEEE
T ss_pred ---hcccchhhhhhhhhhccccccccccceeeeccc---------------hhhhhhhHHHHHHHhCC-Cccccccc
Confidence 144444444332 34556677788999998742 33444456667777776 67765443
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.95 E-value=0.007 Score=52.68 Aligned_cols=68 Identities=15% Similarity=0.055 Sum_probs=51.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|.+|++.++....... .+.....++
T Consensus 41 l~gk~vgIiG-~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~-----------------------------~~~~~~~~l 90 (197)
T d1j4aa1 41 VRDQVVGVVG-TGHIGQVFMQIMEGFGAKVITYDIFRNPELE-----------------------------KKGYYVDSL 90 (197)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCHHHH-----------------------------HTTCBCSCH
T ss_pred ccCCeEEEec-ccccchhHHHhHhhhcccccccCcccccccc-----------------------------cceeeeccc
Confidence 5678999999 8999999999999999999999876543221 011123568
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++..+|+|+.+.....
T Consensus 91 ~~~l~~sDii~~~~plt~ 108 (197)
T d1j4aa1 91 DDLYKQADVISLHVPDVP 108 (197)
T ss_dssp HHHHHHCSEEEECSCCCG
T ss_pred cccccccccccccCCccc
Confidence 888999999998876543
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=95.94 E-value=0.011 Score=49.78 Aligned_cols=76 Identities=14% Similarity=0.120 Sum_probs=49.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.+|+|.|+ |.+|...+..+...|. .|+++++++++.+.+.+ + ...+++..+=.+.+.+
T Consensus 32 ~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~~----~--------------ga~~~i~~~~~~~~~~ 92 (172)
T d1h2ba2 32 PGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAER----L--------------GADHVVDARRDPVKQV 92 (172)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHHH----T--------------TCSEEEETTSCHHHHH
T ss_pred CCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHhh----c--------------ccceeecCcccHHHHH
Confidence 4568999985 9999999999888885 66777888776654432 1 2223443321122333
Q ss_pred HHHh--cCCCEEEEcccC
Q 013273 158 EPAL--GNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~--~~~D~VI~~Ag~ 173 (446)
.+.. .++|+||+++|.
T Consensus 93 ~~~~~~~g~d~vid~~g~ 110 (172)
T d1h2ba2 93 MELTRGRGVNVAMDFVGS 110 (172)
T ss_dssp HHHTTTCCEEEEEESSCC
T ss_pred HHhhCCCCceEEEEecCc
Confidence 3333 358999999885
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=95.94 E-value=0.035 Score=42.16 Aligned_cols=74 Identities=18% Similarity=0.186 Sum_probs=49.9
Q ss_pred CCCCCCEEEEECCCcHHH-HHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 76 DSKDDNLAFVAGATGKVG-SRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 76 ~~~~~~~VlVtGatG~IG-~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
++...++|.+.|- |++| +.|++.|.++|++|...++..+.... .+.. .++.+..++-.
T Consensus 4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~---~L~~---------------~Gi~v~~g~~~-- 62 (96)
T d1p3da1 4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQ---RLAQ---------------AGAKIYIGHAE-- 62 (96)
T ss_dssp CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHH---HHHH---------------TTCEEEESCCG--
T ss_pred cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhh---HHHH---------------CCCeEEECCcc--
Confidence 3556788999984 5566 67899999999999999997654332 1211 34555554432
Q ss_pred hcHHHHhcCCCEEEEcccCC
Q 013273 155 VQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~ 174 (446)
+ -+.+.|.||...+..
T Consensus 63 ~----~i~~~d~vV~S~AI~ 78 (96)
T d1p3da1 63 E----HIEGASVVVVSSAIK 78 (96)
T ss_dssp G----GGTTCSEEEECTTSC
T ss_pred c----cCCCCCEEEECCCcC
Confidence 1 246789999887764
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=95.76 E-value=0.017 Score=48.90 Aligned_cols=42 Identities=17% Similarity=0.112 Sum_probs=35.3
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCchhHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQRAENL 120 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~~~~~l 120 (446)
..+.+|+|.|+ |.||...+..+...|. +|+++++++++.+..
T Consensus 26 ~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a 68 (174)
T d1p0fa2 26 TPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA 68 (174)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH
T ss_pred CCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHH
Confidence 45578999995 9999999999999995 788888998887654
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=95.54 E-value=0.0079 Score=49.79 Aligned_cols=41 Identities=22% Similarity=0.422 Sum_probs=36.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~ 122 (446)
|+|.+.| +|.+|.++++.|++.| ++|++.+|++++.+.+.+
T Consensus 1 MkI~fIG-~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~ 42 (152)
T d1yqga2 1 MNVYFLG-GGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEK 42 (152)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHH
T ss_pred CEEEEEc-CcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhh
Confidence 5799998 5999999999999887 999999999988777654
|
| >d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: UDP-glucose dehydrogenase (UDPGDH) species: Streptococcus pyogenes [TaxId: 1314]
Probab=95.52 E-value=0.02 Score=49.12 Aligned_cols=39 Identities=23% Similarity=0.094 Sum_probs=33.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
|+|.|.| .|++|..++..| +.|++|++++-++.+...+.
T Consensus 1 MkI~ViG-lG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l~ 39 (196)
T d1dlja2 1 MKIAVAG-SGYVGLSLGVLL-SLQNEVTIVDILPSKVDKIN 39 (196)
T ss_dssp CEEEEEC-CSHHHHHHHHHH-TTTSEEEEECSCHHHHHHHH
T ss_pred CEEEEEC-CChhHHHHHHHH-HCCCcEEEEECCHHHHHHHh
Confidence 6899998 899999998766 57999999999988776654
|
| >d2csua1 c.2.1.8 (A:1-129) Acetate-CoA ligase alpha chain, AcdA, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Acetate-CoA ligase alpha chain, AcdA, N-terminal domain species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.49 E-value=0.024 Score=45.59 Aligned_cols=91 Identities=11% Similarity=0.056 Sum_probs=63.0
Q ss_pred CCCCEEEEECCC---cHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 78 KDDNLAFVAGAT---GKVGSRTVRELLKLG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 78 ~~~~~VlVtGat---G~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
+..++|.|.||+ +..|..+.+.|.+.| ++|+.+..+.+.. .++..+ -+|.|
T Consensus 6 f~PksIAVVGaS~~~~~~g~~v~~~L~~~~~g~v~pVnP~~~~i------------------------~G~~~y-~sl~d 60 (129)
T d2csua1 6 FNPKGIAVIGASNDPKKLGYEVFKNLKEYKKGKVYPVNIKEEEV------------------------QGVKAY-KSVKD 60 (129)
T ss_dssp TSCSEEEEETCCSCTTSHHHHHHHHHTTCCSSEEEEECSSCSEE------------------------TTEECB-SSTTS
T ss_pred CCCCeEEEEccCCCCCCcHHHHHHHHHHcCCCcEEEeccCcccc------------------------CCeEee-cchhh
Confidence 456799999999 999999999998766 6888886543211 112211 23333
Q ss_pred hhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 154 RVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
+=..+|.++-+... ..+..+++.|.+.|++.++.+|+...
T Consensus 61 ------lp~~vDlvvi~vp~----------------~~~~~~~~~~~~~g~~~~vi~s~Gf~ 100 (129)
T d2csua1 61 ------IPDEIDLAIIVVPK----------------RFVKDTLIQCGEKGVKGVVIITAGFG 100 (129)
T ss_dssp ------CSSCCSEEEECSCH----------------HHHHHHHHHHHHHTCCEEEECCCSST
T ss_pred ------cCCCCceEEEecCh----------------HHhHHHHHHHHHcCCCEEEEeccccc
Confidence 22568988877532 34667888999999998888887544
|
| >d1y81a1 c.2.1.8 (A:6-121) Hypothetical protein PF0725 {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PF0725 species: Pyrococcus furiosus [TaxId: 2261]
Probab=95.45 E-value=0.033 Score=43.85 Aligned_cols=82 Identities=17% Similarity=0.209 Sum_probs=56.0
Q ss_pred CEEEEECCC---cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGat---G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
|+|.|.|++ +..|..+++.|++.||+|+.+..+.+.. .++.. ..++
T Consensus 2 KsIAVvGaS~~~~k~g~~v~~~L~~~g~~V~pVnP~~~~i------------------------~G~~~-------y~sl 50 (116)
T d1y81a1 2 RKIALVGASKNPAKYGNIILKDLLSKGFEVLPVNPNYDEI------------------------EGLKC-------YRSV 50 (116)
T ss_dssp CEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEEC-------BSSG
T ss_pred cEEEEEcccCCCCCcHHHHHHHHHHCCCEEEEEccccccc------------------------cCccc-------cccc
Confidence 579999988 7799999999999999988875433210 11221 2334
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
.++=..+|.++-+.. -..+..+++.|.+.|++.+++
T Consensus 51 ~~lp~~~D~vvi~vp----------------~~~~~~~l~~~~~~g~k~v~~ 86 (116)
T d1y81a1 51 RELPKDVDVIVFVVP----------------PKVGLQVAKEAVEAGFKKLWF 86 (116)
T ss_dssp GGSCTTCCEEEECSC----------------HHHHHHHHHHHHHTTCCEEEE
T ss_pred hhccccceEEEEEeC----------------HHHHHHHHHHHHhcCCceEEe
Confidence 444456898886643 234667888888899976544
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=95.39 E-value=0.021 Score=48.73 Aligned_cols=41 Identities=22% Similarity=0.234 Sum_probs=36.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
-+|+|.| .|-+|.+-++.....|.+|.+++.+..+.+++.+
T Consensus 30 a~VvViG-aGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~~ 70 (183)
T d1l7da1 30 ARVLVFG-VGVAGLQAIATAKRLGAVVMATDVRAATKEQVES 70 (183)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHHH
T ss_pred cEEEEEc-CcHHHHHHHHHHHHcCCEEEEEeccHHHHHHHHH
Confidence 4799999 5999999999999999999999999988877654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=95.37 E-value=0.027 Score=48.93 Aligned_cols=42 Identities=21% Similarity=0.256 Sum_probs=36.8
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHH
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAEN 119 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~ 119 (446)
+.++++|+|-| .|.+|+++++.|.+.|.+|++.+.+......
T Consensus 24 ~L~gk~v~IqG-~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~ 65 (201)
T d1c1da1 24 SLDGLTVLVQG-LGAVGGSLASLAAEAGAQLLVADTDTERVAH 65 (201)
T ss_dssp CSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEecchHHHHHH
Confidence 46788999999 8999999999999999999998887766554
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=95.32 E-value=0.019 Score=47.72 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=35.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENL 120 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l 120 (446)
.+.+|+|.|+ |.||...+..+...|++|+++++++++...+
T Consensus 27 ~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~ 67 (168)
T d1rjwa2 27 PGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELA 67 (168)
T ss_dssp TTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred CCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhh
Confidence 3568999975 9999999999999999999999999887654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=95.27 E-value=0.0045 Score=52.52 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=49.5
Q ss_pred CCEEEEECCCcHHHHH-HHHHHHHC-----CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 80 DNLAFVAGATGKVGSR-TVRELLKL-----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~-lv~~L~~~-----G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
..+|.|.|| |.+|.. ++..|+.. +.+|++++.++++++.....++...-. .+ ....+..
T Consensus 3 ~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~-----~~----~~~~~~~----- 67 (167)
T d1u8xx1 3 SFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIRE-----KA----PDIEFAA----- 67 (167)
T ss_dssp CEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHH-----HC----TTSEEEE-----
T ss_pred CceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHH-----hC----CCcceEe-----
Confidence 347999997 445543 44455543 248999999998876544444332100 01 1223222
Q ss_pred hhcHHHHhcCCCEEEEcccCCC
Q 013273 154 RVQIEPALGNASVVICCIGASE 175 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~ 175 (446)
..+..++++++|+||+.+|...
T Consensus 68 ~~d~~eal~~AD~Vvitag~~~ 89 (167)
T d1u8xx1 68 TTDPEEAFTDVDFVMAHIRVGK 89 (167)
T ss_dssp ESCHHHHHSSCSEEEECCCTTH
T ss_pred cCChhhccCCCCEEEECCCcCC
Confidence 2347888999999999999753
|
| >d2d59a1 c.2.1.8 (A:4-142) Hypothetical protein PH1109 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein PH1109 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.24 E-value=0.072 Score=43.25 Aligned_cols=84 Identities=13% Similarity=0.037 Sum_probs=57.6
Q ss_pred CCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 79 DDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 79 ~~~~VlVtGat---G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
..++|.|.||+ +..|..+++.|.+.||+|+.+....... .+... ..
T Consensus 18 ~~ksIAVVGaS~~~~~~g~~v~~~L~~~g~~v~pVnP~~~~i------------------------~G~~~-------~~ 66 (139)
T d2d59a1 18 RYKKIALVGASPKPERDANIVMKYLLEHGYDVYPVNPKYEEV------------------------LGRKC-------YP 66 (139)
T ss_dssp HCCEEEEETCCSCTTSHHHHHHHHHHHTTCEEEEECTTCSEE------------------------TTEEC-------BS
T ss_pred cCCeEEEEeecCCCCCchHHHHHHHHHCCCEEEEECCccccc------------------------CCCcc-------cc
Confidence 34689999998 7899999999999999998876543210 11111 22
Q ss_pred cHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEE
Q 013273 156 QIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIM 209 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~ 209 (446)
++.++-..+|.|+-+.. -.....+++.|.+.|++.+++
T Consensus 67 sl~dlp~~iD~v~i~vp----------------~~~~~~~~~e~~~~g~k~v~~ 104 (139)
T d2d59a1 67 SVLDIPDKIEVVDLFVK----------------PKLTMEYVEQAIKKGAKVVWF 104 (139)
T ss_dssp SGGGCSSCCSEEEECSC----------------HHHHHHHHHHHHHHTCSEEEE
T ss_pred cccccCccceEEEEEeC----------------HHHHHHHHHHHHHhCCCEEEE
Confidence 34444456888877753 334677888888889875554
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.23 E-value=0.019 Score=49.58 Aligned_cols=71 Identities=17% Similarity=0.157 Sum_probs=52.9
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...+++|.|.| .|.||+.+++.|..-|.+|+..++......... .++....+
T Consensus 46 eL~gktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~---------------------------~~~~~~~~ 97 (193)
T d1mx3a1 46 RIRGETLGIIG-LGRVGQAVALRAKAFGFNVLFYDPYLSDGVERA---------------------------LGLQRVST 97 (193)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCTTHHHH---------------------------HTCEECSS
T ss_pred eeeCceEEEec-cccccccceeeeeccccceeeccCcccccchhh---------------------------hccccccc
Confidence 35678999999 799999999999999999999998654322110 11222356
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+++++..+|+|+.+.....
T Consensus 98 l~~ll~~sD~i~~~~plt~ 116 (193)
T d1mx3a1 98 LQDLLFHSDCVTLHCGLNE 116 (193)
T ss_dssp HHHHHHHCSEEEECCCCCT
T ss_pred hhhccccCCEEEEeecccc
Confidence 8888999999988876543
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=95.23 E-value=0.0084 Score=50.46 Aligned_cols=99 Identities=17% Similarity=0.208 Sum_probs=58.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.++|+|.|++|.+|+.|++.+.+. +.+++... |...... |.+ .+... +. ...++.-...+
T Consensus 4 ~ikI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~------------g~d--~~~~~--~~--~~~~~~~~~~~ 65 (162)
T d1diha1 4 NIRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLL------------GSD--AGELA--GA--GKTGVTVQSSL 65 (162)
T ss_dssp BEEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTC------------SCC--TTCSS--SS--SCCSCCEESCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhc------------cch--hhhhh--cc--ccCCceeeccH
Confidence 468999999999999999999886 57765544 4322110 000 00000 00 00111112234
Q ss_pred HHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEcccc
Q 013273 158 EPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLG 214 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~ 214 (446)
..++..+|+||...- -.++..+++.|.++++ .+| ++|.|
T Consensus 66 ~~~~~~~DViIDFs~----------------p~~~~~~~~~a~~~~~-~~V-iGTTG 104 (162)
T d1diha1 66 DAVKDDFDVFIDFTR----------------PEGTLNHLAFCRQHGK-GMV-IGTTG 104 (162)
T ss_dssp TTTTTSCSEEEECSC----------------HHHHHHHHHHHHHTTC-EEE-ECCCC
T ss_pred HHHhcccceEEEecc----------------HHHHHHHHHHHHhccc-eeE-EecCC
Confidence 456678999998842 3457788899999987 665 44443
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=95.18 E-value=0.026 Score=48.38 Aligned_cols=71 Identities=13% Similarity=0.045 Sum_probs=52.4
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|.+|...+|.......... ..+....++
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------------------------~~~~~~~~l 94 (188)
T d2naca1 42 LEAMHVGTVA-AGRIGLAVLRRLAPFDVHLHYTDRHRLPESVEKE--------------------------LNLTWHATR 94 (188)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHGGGTCEEEEECSSCCCHHHHHH--------------------------HTCEECSSH
T ss_pred ccccceeecc-ccccchhhhhhhhccCceEEEEeecccccccccc--------------------------ccccccCCH
Confidence 5678999999 7999999999999999999999986543222110 112224567
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
.++++.+|+|+.+.....
T Consensus 95 ~~~l~~sD~v~~~~plt~ 112 (188)
T d2naca1 95 EDMYPVCDVVTLNCPLHP 112 (188)
T ss_dssp HHHGGGCSEEEECSCCCT
T ss_pred HHHHHhccchhhcccccc
Confidence 888999999988876544
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=95.12 E-value=0.015 Score=51.11 Aligned_cols=37 Identities=22% Similarity=0.357 Sum_probs=33.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|...++|+|.| .|..|..++..|.++|++|.++.|+.
T Consensus 3 ~~~~~kVvVIG-aGiaGl~~A~~L~~~G~~V~vier~~ 39 (268)
T d1c0pa1 3 MHSQKRVVVLG-SGVIGLSSALILARKGYSVHILARDL 39 (268)
T ss_dssp CCCSCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCcEEEEC-ccHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 45567899999 59999999999999999999999864
|
| >d1yovb1 c.111.1.2 (B:12-437) UBA3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: UBA3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.92 E-value=0.076 Score=51.38 Aligned_cols=79 Identities=16% Similarity=0.229 Sum_probs=54.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcC-------------------chhHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRS-------------------VQRAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~-------------------~~~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
...+|||.|+ |+||..+++.|+..|. ++++++.+ ..|...+.+.++++
T Consensus 36 ~~~kVlvvG~-GglG~ei~k~L~~~Gvg~i~lvD~D~Ve~sNL~RQflf~~~diG~~Ka~~a~~~l~~~----------- 103 (426)
T d1yovb1 36 DTCKVLVIGA-GGLGCELLKNLALSGFRQIHVIDMDTIDVSNLNRQFLFRPKDIGRPKAEVAAEFLNDR----------- 103 (426)
T ss_dssp HHCCEEEECS-STTHHHHHHHHHTTTCCCEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHH-----------
T ss_pred hcCeEEEECC-CHHHHHHHHHHHHcCCCeEEEEECCCcchhhhcccccCChhHcCcHHHHHHHHHHHhh-----------
Confidence 3468999995 7899999999999995 78888763 12444445555443
Q ss_pred CCCCceEEEEcCCCChhcHHHHhcCCCEEEEcc
Q 013273 139 QPVEMLELVECDLEKRVQIEPALGNASVVICCI 171 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~~~~~~a~~~~D~VI~~A 171 (446)
.+.-++..+..++.+.. ...+.++|+||++.
T Consensus 104 np~v~i~~~~~~i~~~~--~~~~~~~DlVi~~~ 134 (426)
T d1yovb1 104 VPNCNVVPHFNKIQDFN--DTFYRQFHIIVCGL 134 (426)
T ss_dssp STTCCCEEECSCGGGBC--HHHHTTCSEEEECC
T ss_pred CCCCceEeeeccccchH--HHHHHhcchheecc
Confidence 11234566666665433 46789999999884
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=94.77 E-value=0.12 Score=43.71 Aligned_cols=36 Identities=17% Similarity=0.060 Sum_probs=32.9
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
..+++|+|.| +|..|...+..|.++||+|+++.+.+
T Consensus 41 ~~~k~V~IIG-aGPAGL~AA~~la~~G~~Vtl~E~~~ 76 (179)
T d1ps9a3 41 VQKKNLAVVG-AGPAGLAFAINAAARGHQVTLFDAHS 76 (179)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCCcEEEEEC-ccHHHHHHHHHHHhhccceEEEeccC
Confidence 4568999999 59999999999999999999999965
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.77 E-value=0.034 Score=47.87 Aligned_cols=72 Identities=7% Similarity=0.040 Sum_probs=52.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
...++++.|.| .|.||+.+++.|..-|.+|...++.......... ......++
T Consensus 44 ~l~g~tvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~~--------------------------~~~~~~~~ 96 (191)
T d1gdha1 44 KLDNKTLGIYG-FGSIGQALAKRAQGFDMDIDYFDTHRASSSDEAS--------------------------YQATFHDS 96 (191)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSCCCHHHHHH--------------------------HTCEECSS
T ss_pred eecccceEEee-cccchHHHHHHHHhhccccccccccccccchhhc--------------------------ccccccCC
Confidence 35678999999 7999999999999999999999886543322110 01111356
Q ss_pred HHHHhcCCCEEEEcccCCC
Q 013273 157 IEPALGNASVVICCIGASE 175 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~ 175 (446)
+++++..+|+|+.+...+.
T Consensus 97 l~~ll~~sD~v~l~~plt~ 115 (191)
T d1gdha1 97 LDSLLSVSQFFSLNAPSTP 115 (191)
T ss_dssp HHHHHHHCSEEEECCCCCT
T ss_pred HHHHHhhCCeEEecCCCCc
Confidence 8889999999988776543
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=94.76 E-value=0.024 Score=44.98 Aligned_cols=36 Identities=14% Similarity=0.175 Sum_probs=32.2
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
..++|+|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 29 ~~~~vvIIG-gG~iG~E~A~~l~~~g~~Vtli~~~~~ 64 (121)
T d1d7ya2 29 PQSRLLIVG-GGVIGLELAATARTAGVHVSLVETQPR 64 (121)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred cCCeEEEEC-cchhHHHHHHHhhcccceEEEEeeccc
Confidence 346899999 599999999999999999999999764
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=94.73 E-value=0.033 Score=47.55 Aligned_cols=69 Identities=17% Similarity=0.152 Sum_probs=52.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..++++.|.| .|.||+.+++.|..-|.+|+..+|...+..... ..+. ..++
T Consensus 42 l~~k~vgiiG-~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~~--------------------~~~~--------~~~l 92 (184)
T d1ygya1 42 IFGKTVGVVG-LGRIGQLVAQRIAAFGAYVVAYDPYVSPARAAQ--------------------LGIE--------LLSL 92 (184)
T ss_dssp CTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEECTTSCHHHHHH--------------------HTCE--------ECCH
T ss_pred ccceeeeecc-ccchhHHHHHHhhhccceEEeecCCCChhHHhh--------------------cCce--------eccH
Confidence 5678999999 799999999999999999999998765433211 1111 2357
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++..+|+|+.+...+.
T Consensus 93 ~ell~~sDiv~~~~Plt~ 110 (184)
T d1ygya1 93 DDLLARADFISVHLPKTP 110 (184)
T ss_dssp HHHHHHCSEEEECCCCST
T ss_pred HHHHhhCCEEEEcCCCCc
Confidence 888999999998876544
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=94.63 E-value=0.046 Score=45.85 Aligned_cols=101 Identities=16% Similarity=0.197 Sum_probs=59.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-CCeEEEEE-cCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL-GFRVRAGV-RSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~-R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
++.+|.|.| +|++|+.+++.|.+. +++++++. |+.... ....+.. ..+
T Consensus 2 ~kirvgiiG-~G~ig~~~~~~l~~~~~~elvav~~~~~~~~------------------------~~~~~~~-----~~~ 51 (170)
T d1f06a1 2 TNIRVAIVG-YGNLGRSVEKLIAKQPDMDLVGIFSRRATLD------------------------TKTPVFD-----VAD 51 (170)
T ss_dssp CCEEEEEEC-CSHHHHHHHHHHTTCSSEEEEEEEESSSCCS------------------------SSSCEEE-----GGG
T ss_pred CcceEEEEC-ChHHHHHHHHHHHhCCCcEEEEEEecccccc------------------------ccccccc-----chh
Confidence 356899999 799999999999876 57777554 443221 1111111 223
Q ss_pred HHHHhcCCCEEEEcccCCCC------------ccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 157 IEPALGNASVVICCIGASEK------------EVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~------------~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
+..+..++|+|+.+.+...+ ..-........+......|.++|++.+. .++++
T Consensus 52 ~~~~~~~~D~Vvi~tp~~~h~~~a~~aL~aG~~vv~~~~~~~~~~~~~~~l~~~A~~~~~--~~~i~ 116 (170)
T d1f06a1 52 VDKHADDVDVLFLCMGSATDIPEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAGN--VALVS 116 (170)
T ss_dssp GGGTTTTCSEEEECSCTTTHHHHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHTC--EEECS
T ss_pred hhhhccccceEEEeCCCcccHHHHHHHHHCCCcEEEecCccccCHHHHHHHHHHHHhcCc--eEEEe
Confidence 44455789999988764311 1111122344455656677777777654 44444
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.55 E-value=0.024 Score=48.35 Aligned_cols=32 Identities=19% Similarity=0.341 Sum_probs=27.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRS 113 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~ 113 (446)
-+|.|-| .|.||+.++|.|.+++ .+|+++...
T Consensus 2 IKVaING-fGRIGR~v~Ral~~~~dievVaInd~ 34 (178)
T d1b7go1 2 VNVAVNG-YGTIGKRVADAIIKQPDMKLVGVAKT 34 (178)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEECS
T ss_pred eEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEECC
Confidence 4799999 8999999999999875 788887654
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=94.47 E-value=0.032 Score=44.26 Aligned_cols=35 Identities=23% Similarity=0.218 Sum_probs=31.5
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
..++|+|.| .|++|..++..|.+.|++|+++.|.+
T Consensus 29 ~~k~vvViG-gG~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 29 EVNNVVVIG-SGYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCCEEEEEC-ChHHHHHHHHHhhccceEEEEEEecC
Confidence 356899999 59999999999999999999998865
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.35 E-value=0.031 Score=43.79 Aligned_cols=35 Identities=17% Similarity=0.157 Sum_probs=31.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
.++++|.| .|++|..++..|.+.|.+|+++.|.+.
T Consensus 22 p~~v~IiG-gG~ig~E~A~~l~~~G~~Vtlve~~~~ 56 (117)
T d1ebda2 22 PKSLVVIG-GGYIGIELGTAYANFGTKVTILEGAGE 56 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CCccceeeeeeecccccEEEEEEecce
Confidence 36899999 599999999999999999999998764
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=94.29 E-value=0.092 Score=43.71 Aligned_cols=43 Identities=23% Similarity=0.157 Sum_probs=33.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCchhHHHHH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQRAENLV 121 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~~~~~l~ 121 (446)
..+.+|+|.|+ |.+|...+..+...| .+|+++++++++.+...
T Consensus 27 k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~ 70 (175)
T d1cdoa2 27 EPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK 70 (175)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH
T ss_pred CCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH
Confidence 45678999996 668888888788877 57888999988876543
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=94.28 E-value=0.032 Score=47.84 Aligned_cols=67 Identities=13% Similarity=0.022 Sum_probs=50.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|.+|+..++...... ... ...+.+
T Consensus 42 l~~~~vgiiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----------------------~~~-------~~~~~l 90 (188)
T d1sc6a1 42 ARGKKLGIIG-YGHIGTQLGILAESLGMYVYFYDIENKLPL-----------------------GNA-------TQVQHL 90 (188)
T ss_dssp STTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----------------------TTC-------EECSCH
T ss_pred ccceEEEEee-cccchhhhhhhcccccceEeeccccccchh-----------------------hhh-------hhhhhH
Confidence 5678999998 899999999999999999999998643210 011 112468
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++..+|+|+.++....
T Consensus 91 ~ell~~sDii~i~~plt~ 108 (188)
T d1sc6a1 91 SDLLNMSDVVSLHVPENP 108 (188)
T ss_dssp HHHHHHCSEEEECCCSST
T ss_pred HHHHhhccceeecccCCc
Confidence 888999999998877543
|
| >d1yova1 c.111.1.2 (A:6-534) Amyloid beta precursor protein-binding protein 1, APPBP1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Ubiquitin activating enzymes (UBA) domain: Amyloid beta precursor protein-binding protein 1, APPBP1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.27 E-value=0.04 Score=55.02 Aligned_cols=109 Identities=14% Similarity=0.101 Sum_probs=67.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch-------------------hHHHHHHHHHHhhhcccccccCC
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ-------------------RAENLVQSVKQMKLDGELANKGI 138 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~-------------------~~~~l~~~~~~~~l~~~~~~~g~ 138 (446)
...+|+|.|+ |++|..+++.|+..| .++++++.+.- ++..+.+.+..+
T Consensus 24 ~~s~VlvvG~-gglG~Ei~knLvl~GVg~itivD~d~v~~sdL~rqf~~~~~diGk~ka~~~~~~L~~l----------- 91 (529)
T d1yova1 24 ESAHVCLINA-TATGTEILKNLVLPGIGSFTIIDGNQVSGEDAGNNFFLQRSSIGKNRAEAAMEFLQEL----------- 91 (529)
T ss_dssp HHCEEEECCC-SHHHHHHHHHHHTTTCSEEEEECCSBCCHHHHHHCTTCCGGGTTSBHHHHHHHHHHTT-----------
T ss_pred hCCCEEEECC-CHHHHHHHHHHHHhcCCEEEEEcCCcCChhhcCchhcCChhhCCCHHHHHHHHHHHHh-----------
Confidence 3458999995 889999999999999 57888765432 233333333322
Q ss_pred CCCCceEEEEcCCCCh-hcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 139 QPVEMLELVECDLEKR-VQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 139 ~~~~~v~~v~~Dl~d~-~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.+.-+++++..++.+. +.-...+.++|+||.+.. |......+-+.|.++++ .||+..+.|.
T Consensus 92 Np~v~i~~~~~~~~~~~~~~~~~~~~~dvVv~~~~---------------~~~~~~~l~~~c~~~~i-p~i~~~~~G~ 153 (529)
T d1yova1 92 NSDVSGSFVEESPENLLDNDPSFFCRFTVVVATQL---------------PESTSLRLADVLWNSQI-PLLICRTYGL 153 (529)
T ss_dssp CTTSBCCEESSCHHHHHHSCGGGGGGCSEEEEESC---------------CHHHHHHHHHHHHHHTC-CEEEEEEETT
T ss_pred CCCCcEEEEcCCchhhhhhHHHHhcCCCEEEECCC---------------CHHHHHHHHHHHHHcCC-CEEEEeccCC
Confidence 1112344444433221 111244678999998742 34455667788888887 6888877554
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=94.27 E-value=0.068 Score=44.48 Aligned_cols=69 Identities=19% Similarity=0.312 Sum_probs=53.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+..+|+++|.| =|.+|+.+++.|...|.+|+++..++-++-+ . .+| +.++ ..
T Consensus 20 ~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alq--A-----~md------------Gf~v--------~~ 71 (163)
T d1v8ba1 20 LISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQ--A-----VME------------GFNV--------VT 71 (163)
T ss_dssp CCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHH--H-----HTT------------TCEE--------CC
T ss_pred eecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHH--H-----Hhc------------CCcc--------Cc
Confidence 56789999999 7999999999999999999999998854322 1 122 2222 34
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
+++++...|++|-+.|-
T Consensus 72 ~~~a~~~aDi~vTaTGn 88 (163)
T d1v8ba1 72 LDEIVDKGDFFITCTGN 88 (163)
T ss_dssp HHHHTTTCSEEEECCSS
T ss_pred hhHccccCcEEEEcCCC
Confidence 67888889999988775
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=94.25 E-value=0.023 Score=49.25 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=50.5
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+++|.|.| .|.||+.+++.|..-|.+|++.++...... ...+. ..++
T Consensus 43 l~~ktvgIiG-~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----------------------~~~~~--------~~~l 91 (199)
T d1dxya1 43 LGQQTVGVMG-TGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----------------------HPDFD--------YVSL 91 (199)
T ss_dssp GGGSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCCSSC----------------------CTTCE--------ECCH
T ss_pred ccceeeeeee-cccccccccccccccceeeeccCCccchhh----------------------hcchh--------HHHH
Confidence 4568999999 799999999999999999999998654210 01121 2357
Q ss_pred HHHhcCCCEEEEcccCCC
Q 013273 158 EPALGNASVVICCIGASE 175 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~ 175 (446)
++++..+|+|+.+.....
T Consensus 92 ~~l~~~~D~v~~~~plt~ 109 (199)
T d1dxya1 92 EDLFKQSDVIDLHVPGIE 109 (199)
T ss_dssp HHHHHHCSEEEECCCCCG
T ss_pred HHHHHhcccceeeecccc
Confidence 888888999988876543
|
| >d1s6ya1 c.2.1.5 (A:4-172) 6-phospho-beta-glucosidase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=94.20 E-value=0.065 Score=44.99 Aligned_cols=117 Identities=11% Similarity=0.015 Sum_probs=62.8
Q ss_pred CEEEEECC-CcHHHHHHHHHHHHCC----CeEEEEEcCchh--HHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCC
Q 013273 81 NLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQR--AENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEK 153 (446)
Q Consensus 81 ~~VlVtGa-tG~IG~~lv~~L~~~G----~~V~~~~R~~~~--~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d 153 (446)
++|.|.|| +.+.+..++..|+... .++++++.++++ .+.+....... +.+. + ..+.+..
T Consensus 2 ~KI~iIGaGs~~~~~~~~~l~~~~~~~~~~eI~L~Di~e~~~~~~~~d~~~~~~-~~~~----~----~~~~~~~----- 67 (169)
T d1s6ya1 2 LKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEKLEIVGALAKRM-VEKA----G----VPIEIHL----- 67 (169)
T ss_dssp EEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHHHHHHHHHHHHH-HHHT----T----CCCEEEE-----
T ss_pred cEEEEECCChhhHHHHHHHHHHhccccCCCEEEEEcCCccHHHHHHHHHHHHHH-HHhc----C----CCceeee-----
Confidence 57999996 3455566655555432 488999988754 33222111111 1100 0 1122221
Q ss_pred hhcHHHHhcCCCEEEEcccCCCCccCCC---------------CCc-----ccchHHHHHHHHHHHHhCCCCEEEEEc
Q 013273 154 RVQIEPALGNASVVICCIGASEKEVFDI---------------TGP-----YRIDFQATKNLVDAATIAKVNHFIMVS 211 (446)
Q Consensus 154 ~~~~~~a~~~~D~VI~~Ag~~~~~~~~~---------------~~~-----~~vNv~g~~~l~~aa~~~~v~r~V~vS 211 (446)
..+..++++++|+||+.||......+.. ... ..-|+.....+++..++....-++.+-
T Consensus 68 ~td~~~al~gaDvVv~ta~~~~~~~~~r~~~i~~~~gi~~~~t~g~~~~~~~~~n~~i~~~i~~~i~~~~pda~~i~v 145 (169)
T d1s6ya1 68 TLDRRRALDGADFVTTQFRVGGLEARAKDERIPLKYGVIGQETNGPGGLFKGLRTIPVILDIIRDMEELCPDAWLINF 145 (169)
T ss_dssp ESCHHHHHTTCSEEEECCCTTHHHHHHHHHHTGGGGTCCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred cCCchhhcCCCCEEEEccccCCCCCeehhhhhhhhcCceeccccCcchhhhccccHHHHHHHHHHHhhcCCCeEEEEe
Confidence 2345778899999999999753211100 000 113666677778888777655454443
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.18 E-value=0.033 Score=47.09 Aligned_cols=32 Identities=19% Similarity=0.217 Sum_probs=26.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR 112 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R 112 (446)
.++|.|-| .|.||+.+++.|..+. .+|+.+..
T Consensus 2 ~irIaING-fGRIGR~v~Ral~~~~dieiVaINd 34 (172)
T d2czca2 2 KVKVGVNG-YGTIGKRVAYAVTKQDDMELIGITK 34 (172)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTCTTEEEEEEEE
T ss_pred cEEEEEEC-CCHHHHHHHHHHHhCCCceEEEEec
Confidence 45899999 7999999999998865 67776654
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=93.98 E-value=0.037 Score=43.50 Aligned_cols=34 Identities=15% Similarity=0.209 Sum_probs=31.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++|+|.| .|++|..++..|.+.|.+|+++.|.+
T Consensus 22 p~~v~IiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 22 SKKIGIVG-SGYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred CCEEEEEC-CchHHHHHHHHHHhccccceeeehhc
Confidence 56899999 59999999999999999999999964
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=93.98 E-value=0.037 Score=46.77 Aligned_cols=32 Identities=19% Similarity=0.304 Sum_probs=26.3
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-FRVRAGVR 112 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R 112 (446)
|++|.|-| -|.||+.++|.|..++ .+|+.+..
T Consensus 1 M~~VgING-fGRIGR~v~R~l~~~~di~vvaInd 33 (171)
T d1cf2o1 1 MKAVAING-YGTVGKRVADAIAQQDDMKVIGVSK 33 (171)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHTSSSEEEEEEEE
T ss_pred CeEEEEEc-CcHHHHHHHHHHHhCCCceEEEEec
Confidence 46899998 8999999999998876 67766554
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=93.95 E-value=0.041 Score=43.32 Aligned_cols=35 Identities=20% Similarity=0.100 Sum_probs=31.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|...
T Consensus 22 p~~i~IiG-~G~ig~E~A~~l~~~G~~Vtiv~~~~~ 56 (119)
T d3lada2 22 PGKLGVIG-AGVIGLELGSVWARLGAEVTVLEAMDK 56 (119)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHHHHcCCceEEEEeecc
Confidence 46899999 599999999999999999999998753
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.90 E-value=0.036 Score=43.91 Aligned_cols=34 Identities=18% Similarity=0.131 Sum_probs=31.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|.+
T Consensus 23 p~~~vIiG-~G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIG-GGIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEEC-CCchHHHHHHHHHhhCcceeEEEecc
Confidence 36899999 59999999999999999999999865
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=93.89 E-value=0.076 Score=44.39 Aligned_cols=37 Identities=30% Similarity=0.198 Sum_probs=33.1
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
..+++|+|.|.+.-+|+-|+..|.++|+.|+++....
T Consensus 35 l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t 71 (166)
T d1b0aa1 35 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT 71 (166)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC
T ss_pred cccceEEEEeccccccHHHHHHHHHhhcccccccccc
Confidence 5789999999999999999999999999998876543
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.82 E-value=0.11 Score=43.64 Aligned_cols=39 Identities=21% Similarity=0.089 Sum_probs=34.6
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
...+++|+|.|.+.-+|+-|+..|+++|+.|+++.....
T Consensus 36 ~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~ 74 (170)
T d1a4ia1 36 PIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTA 74 (170)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS
T ss_pred ccccceEEEEecCCccchHHHHHHHhccCceEEEecccc
Confidence 367899999999999999999999999999998776543
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=93.74 E-value=0.04 Score=43.10 Aligned_cols=34 Identities=18% Similarity=0.073 Sum_probs=31.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++|+|.| .|++|..++..|.+.|.+|+++.|.+
T Consensus 21 p~~vvIiG-gG~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVG-AGYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEC-CChhhHHHHHHhhccccEEEEEeecc
Confidence 36899999 59999999999999999999999975
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=93.56 E-value=0.044 Score=43.48 Aligned_cols=34 Identities=18% Similarity=0.239 Sum_probs=31.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|++
T Consensus 22 pk~vvIvG-gG~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 22 PGRSVIVG-AGYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEEc-CCccHHHHHHHHhcCCcEEEEEeecc
Confidence 36899999 59999999999999999999999974
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=93.51 E-value=0.39 Score=38.43 Aligned_cols=30 Identities=33% Similarity=0.424 Sum_probs=25.2
Q ss_pred EEEEECCCcHHHHHHHHHHHHC-CCeEEEEE
Q 013273 82 LAFVAGATGKVGSRTVRELLKL-GFRVRAGV 111 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~-G~~V~~~~ 111 (446)
||.|.|++|..|+.+++.+.+. ++++....
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~ 31 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAEL 31 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEE
Confidence 6899999999999999998775 57776644
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=93.49 E-value=0.051 Score=43.67 Aligned_cols=36 Identities=22% Similarity=0.264 Sum_probs=32.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
..++|+|.| +|++|..++..|.+.|.+|+++.|.+.
T Consensus 34 ~~k~v~VIG-gG~iG~E~A~~l~~~g~~Vtvie~~~~ 69 (133)
T d1q1ra2 34 ADNRLVVIG-GGYIGLEVAATAIKANMHVTLLDTAAR 69 (133)
T ss_dssp TTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCEEEEEC-CchHHHHHHHHHHhhCcceeeeeeccc
Confidence 357899999 599999999999999999999998653
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=93.44 E-value=0.041 Score=43.47 Aligned_cols=34 Identities=24% Similarity=0.359 Sum_probs=31.0
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
++++|.| .|++|..++..|.+.|++|+++.|.+.
T Consensus 33 ~~vvIiG-gG~iG~E~A~~l~~~g~~Vtlv~~~~~ 66 (122)
T d1xhca2 33 GEAIIIG-GGFIGLELAGNLAEAGYHVKLIHRGAM 66 (122)
T ss_dssp SEEEEEE-CSHHHHHHHHHHHHTTCEEEEECSSSC
T ss_pred CcEEEEC-CcHHHHHHHHHhhcccceEEEEecccc
Confidence 5799999 599999999999999999999998754
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=93.39 E-value=0.039 Score=43.08 Aligned_cols=34 Identities=24% Similarity=0.176 Sum_probs=30.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++++|.| .|++|..++..|.+.|++|+++.|.+
T Consensus 21 p~~vvIiG-gG~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 21 PQHLVVVG-GGYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHHhhcccceEEEeeec
Confidence 36899999 59999999999999999999999864
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=93.31 E-value=0.12 Score=45.62 Aligned_cols=44 Identities=18% Similarity=0.136 Sum_probs=38.1
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+.++++|+|-| -|.+|+++++.|.+.|.+|++.+.+......+.
T Consensus 36 ~l~g~~v~IqG-~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~ 79 (230)
T d1leha1 36 SLEGLAVSVQG-LGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAV 79 (230)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEeecccHHHHHHHH
Confidence 46789999999 899999999999999999999988876665543
|
| >d2cvza2 c.2.1.6 (A:2-157) Hydroxyisobutyrate dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=93.28 E-value=0.28 Score=40.01 Aligned_cols=39 Identities=15% Similarity=0.083 Sum_probs=32.1
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
+|.+.| .|..|..+++.|++.|+.| +..|+.++...+.+
T Consensus 2 kIg~IG-lG~MG~~ma~~L~~~g~~~-~~~~~~~~~~~~~~ 40 (156)
T d2cvza2 2 KVAFIG-LGAMGYPMAGHLARRFPTL-VWNRTFEKALRHQE 40 (156)
T ss_dssp CEEEEC-CSTTHHHHHHHHHTTSCEE-EECSSTHHHHHHHH
T ss_pred eEEEEe-HHHHHHHHHHHHHhCCCEE-EEeCCHHHHHHHHH
Confidence 588999 6999999999999998765 67888877766544
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=93.26 E-value=0.035 Score=45.49 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=31.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
.++++|||+|| |.+|..-++.|++.|.+|++++..
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap~ 45 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSPD 45 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCC
Confidence 57789999996 999999999999999999999754
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.14 E-value=0.097 Score=44.09 Aligned_cols=102 Identities=15% Similarity=0.161 Sum_probs=65.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHC-CCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~-G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+|.|.| +|.+|+..++.|... +++|++ .+++.++...+.+... +. ....+ .++++
T Consensus 2 iki~iIG-~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~---~~-----------~~~~~-------~~~~~ 59 (184)
T d1ydwa1 2 IRIGVMG-CADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANN---YP-----------ESTKI-------HGSYE 59 (184)
T ss_dssp EEEEEES-CCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTT---CC-----------TTCEE-------ESSHH
T ss_pred eEEEEEc-CCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccc---cc-----------cceee-------cCcHH
Confidence 4799999 699999999999886 578875 4677776655433210 00 11222 13456
Q ss_pred HHh--cCCCEEEEcccCCCC---------ccC--CCCCcccchHHHHHHHHHHHHhCCC
Q 013273 159 PAL--GNASVVICCIGASEK---------EVF--DITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 159 ~a~--~~~D~VI~~Ag~~~~---------~~~--~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
+++ .++|+|+-+.....+ ... --+++...|+.-...|++.+++.++
T Consensus 60 ~ll~~~~iD~v~I~tp~~~h~~~~~~~l~~g~~v~~EKP~~~~~~e~~~l~~~~~~~~~ 118 (184)
T d1ydwa1 60 SLLEDPEIDALYVPLPTSLHVEWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGV 118 (184)
T ss_dssp HHHHCTTCCEEEECCCGGGHHHHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTC
T ss_pred HhhhccccceeeecccchhhcchhhhhhhccceeecccccccCHHHHHHHHHHHHhhCC
Confidence 666 468999876543211 000 1245667789999999999998876
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=93.10 E-value=0.18 Score=42.36 Aligned_cols=101 Identities=18% Similarity=0.183 Sum_probs=62.8
Q ss_pred CCEEEEECCCcHHHHH-HHHHHHHCC--CeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 80 DNLAFVAGATGKVGSR-TVRELLKLG--FRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~-lv~~L~~~G--~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
+.+|.|.| +|.+|+. .+..|.+.+ ++|++ .+|+.++...+.+.+ +...+ . .
T Consensus 3 kirigiIG-~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~-----------------~~~~~-~------~ 57 (181)
T d1zh8a1 3 KIRLGIVG-CGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMV-----------------GNPAV-F------D 57 (181)
T ss_dssp CEEEEEEC-CSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHH-----------------SSCEE-E------S
T ss_pred CcEEEEEc-CCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccc-----------------cccce-e------e
Confidence 45899999 7999986 466776643 56664 567776666544322 11111 1 3
Q ss_pred cHHHHh--cCCCEEEEcccCCCC---------ccCC--CCCcccchHHHHHHHHHHHHhCCCC
Q 013273 156 QIEPAL--GNASVVICCIGASEK---------EVFD--ITGPYRIDFQATKNLVDAATIAKVN 205 (446)
Q Consensus 156 ~~~~a~--~~~D~VI~~Ag~~~~---------~~~~--~~~~~~vNv~g~~~l~~aa~~~~v~ 205 (446)
++++++ .++|+|+-+.....+ ...+ -+++...|+.-...|++.++++++.
T Consensus 58 ~~~ell~~~~id~v~I~tp~~~h~~~~~~al~~gk~V~~EKPl~~~~~e~~~l~~~~~~~~~~ 120 (181)
T d1zh8a1 58 SYEELLESGLVDAVDLTLPVELNLPFIEKALRKGVHVICEKPISTDVETGKKVVELSEKSEKT 120 (181)
T ss_dssp CHHHHHHSSCCSEEEECCCGGGHHHHHHHHHHTTCEEEEESSSSSSHHHHHHHHHHHHHCSSC
T ss_pred eeeccccccccceeeccccccccccccccccccchhhhcCCCCcCCHHHHHHHHHHHHHhCCe
Confidence 466666 358999877543211 0000 2456677889999999999998763
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.04 E-value=0.054 Score=42.83 Aligned_cols=33 Identities=27% Similarity=0.294 Sum_probs=30.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|+
T Consensus 20 P~~vvIIG-gG~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVG-ASYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEEC-CCccHHHHHHHHhhcCCeEEEEEec
Confidence 35799999 5999999999999999999999986
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=93.01 E-value=0.21 Score=41.11 Aligned_cols=98 Identities=12% Similarity=0.121 Sum_probs=62.3
Q ss_pred CEEEEECCCcHHHHH-HHHHHHHC-CCeEEE-EEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGSR-TVRELLKL-GFRVRA-GVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~~-lv~~L~~~-G~~V~~-~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
++|.|.| +|.+|+. ....|.+. +++|+. .+++.++...+.+.. + .+. .+.+
T Consensus 2 iri~iIG-~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~------------------~-----~~~--~~~~ 55 (164)
T d1tlta1 2 LRIGVVG-LGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESW------------------R-----IPY--ADSL 55 (164)
T ss_dssp EEEEEEC-CSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHH------------------T-----CCB--CSSH
T ss_pred CEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcc------------------c-----ccc--cccc
Confidence 5799999 6999975 46666654 677765 457777766654322 1 112 2335
Q ss_pred HHHhcCCCEEEEcccCCCC---------ccC--CCCCcccchHHHHHHHHHHHHhCCC
Q 013273 158 EPALGNASVVICCIGASEK---------EVF--DITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~~~~---------~~~--~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
++++.++|+|+-+.....+ ... -.++++..|+.-...|+++++++++
T Consensus 56 ~~l~~~~D~V~I~tp~~~h~~~~~~al~~gk~V~~EKPla~~~~e~~~l~~~a~~~~~ 113 (164)
T d1tlta1 56 SSLAASCDAVFVHSSTASHFDVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKL 113 (164)
T ss_dssp HHHHTTCSEEEECSCTTHHHHHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTC
T ss_pred hhhhhhcccccccccchhccccccccccccceeeccccccCCHHHHHHHHHHHHHcCC
Confidence 5666889999877543210 000 0245566788888999999988876
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=92.99 E-value=0.17 Score=41.49 Aligned_cols=35 Identities=29% Similarity=0.303 Sum_probs=29.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~ 114 (446)
|++|.|.|+||-||...++-+.+. .++|++++-+.
T Consensus 1 MK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~ 37 (151)
T d1q0qa2 1 MKQLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGK 37 (151)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESS
T ss_pred CCeEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 468999999999999999999886 48888877543
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.81 E-value=0.48 Score=34.97 Aligned_cols=69 Identities=10% Similarity=0.054 Sum_probs=45.9
Q ss_pred CEEEEECCCcHHHH-HHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGS-RTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~-~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
|+|-+.|- |++|. .|++.|.++|++|...++..+.... .++++ ++.+..+ .+.+.
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~---~L~~~---------------Gi~i~~g--h~~~~--- 57 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTA---YLRKL---------------GIPIFVP--HSADN--- 57 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHH---HHHHT---------------TCCEESS--CCTTS---
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHH---HHHHC---------------CCeEEee--ecccc---
Confidence 67888884 55665 7899999999999999998754332 23332 3444332 12222
Q ss_pred HhcCCCEEEEcccCC
Q 013273 160 ALGNASVVICCIGAS 174 (446)
Q Consensus 160 a~~~~D~VI~~Ag~~ 174 (446)
+.++|.||...+..
T Consensus 58 -i~~~d~vV~SsAI~ 71 (89)
T d1j6ua1 58 -WYDPDLVIKTPAVR 71 (89)
T ss_dssp -CCCCSEEEECTTCC
T ss_pred -cCCCCEEEEecCcC
Confidence 35789999987764
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=92.62 E-value=0.12 Score=42.66 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=62.6
Q ss_pred CEEEEECCCcHHHHH-HHHHHHHC-CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 81 NLAFVAGATGKVGSR-TVRELLKL-GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 81 ~~VlVtGatG~IG~~-lv~~L~~~-G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
++|.|.| +|.+|+. .+..|.+. +.+++++++++++...+.+.+. +..+..|+ +
T Consensus 2 irvgiiG-~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~------------------~~~~~~~~------~ 56 (167)
T d1xeaa1 2 LKIAMIG-LGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYR------------------VSATCTDY------R 56 (167)
T ss_dssp EEEEEEC-CCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTT------------------CCCCCSST------T
T ss_pred eEEEEEc-CCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcc------------------cccccccH------H
Confidence 4799999 6888965 56666665 4688888888877776554321 11111222 2
Q ss_pred HHh-cCCCEEEEcccCCCC----------cc-CCCCCcccchHHHHHHHHHHHHhCCCC
Q 013273 159 PAL-GNASVVICCIGASEK----------EV-FDITGPYRIDFQATKNLVDAATIAKVN 205 (446)
Q Consensus 159 ~a~-~~~D~VI~~Ag~~~~----------~~-~~~~~~~~vNv~g~~~l~~aa~~~~v~ 205 (446)
+++ .++|+|+-+.....+ .. ---+.++..|..-...|++++++.+..
T Consensus 57 ~ll~~~iD~V~I~tp~~~H~~~~~~al~~gk~V~~EKP~~~~~~e~~~l~~~a~~~~~~ 115 (167)
T d1xeaa1 57 DVLQYGVDAVMIHAATDVHSTLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQP 115 (167)
T ss_dssp GGGGGCCSEEEECSCGGGHHHHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCC
T ss_pred HhcccccceecccccccccccccccccccccccccCCCCcCCHHHHHHHHHHHHHcCCE
Confidence 233 368998877543211 00 012455678899999999999998864
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=92.56 E-value=0.043 Score=39.96 Aligned_cols=36 Identities=19% Similarity=0.146 Sum_probs=32.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchh
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQR 116 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~ 116 (446)
+|+|.|.| +|.+|+-++.+..+.|++|++++-+++.
T Consensus 1 ~k~vgIlG-~GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 1 MKQVCVLG-NGQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp CEEEEEEB-CSHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CCEEEEEc-CCHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 36899999 6999999999999999999999977653
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=92.39 E-value=0.11 Score=40.58 Aligned_cols=36 Identities=19% Similarity=0.060 Sum_probs=32.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
..++|+|.| +|+||..++..|.+.|.+|.++.|.+.
T Consensus 21 ~~~~vvVvG-gG~ig~E~A~~l~~~g~~vt~i~~~~~ 56 (121)
T d1mo9a2 21 PGSTVVVVG-GSKTAVEYGCFFNATGRRTVMLVRTEP 56 (121)
T ss_dssp CCSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHhcchhheEeeccch
Confidence 357899999 699999999999999999999999753
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.29 E-value=0.064 Score=45.06 Aligned_cols=35 Identities=14% Similarity=0.173 Sum_probs=31.1
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~~ 115 (446)
+++|+|.| .|..|...+..|.++|+ +|+++.|+..
T Consensus 4 ~~kVaIIG-aGpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLG-AGPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEEC-CSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEEC-ChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 46899999 59999999999999998 5999998764
|
| >d1up7a1 c.2.1.5 (A:1-162) 6-phospho-beta-glucosidase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: 6-phospho-beta-glucosidase species: Thermotoga maritima [TaxId: 2336]
Probab=92.17 E-value=0.14 Score=42.53 Aligned_cols=76 Identities=18% Similarity=0.095 Sum_probs=47.4
Q ss_pred CEEEEECCCcHHHHHHHHH-HHH-C----CCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCCh
Q 013273 81 NLAFVAGATGKVGSRTVRE-LLK-L----GFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKR 154 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~-L~~-~----G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~ 154 (446)
|||.|.|| |.+|...+-. |++ . +.++++++.++++.....+..+... . ....+.. .
T Consensus 1 mKIaiIGa-Gs~g~~~~~~~l~~~~~~~~~~el~L~Did~~k~~~~~d~~~~~~-~-----------~~~~~~~-----t 62 (162)
T d1up7a1 1 MRIAVIGG-GSSYTPELVKGLLDISEDVRIDEVIFYDIDEEKQKIVVDFVKRLV-K-----------DRFKVLI-----S 62 (162)
T ss_dssp CEEEEETT-TCTTHHHHHHHHHHHTTTSCCCEEEEECSCHHHHHHHHHHHHHHH-T-----------TSSEEEE-----C
T ss_pred CEEEEECC-CHHHHHHHHHHHHhcccccCccEEEEEecCcHHHHHHHHHHHhhh-c-----------cCceEEE-----e
Confidence 57999997 5466555532 322 1 3689999999988765443333221 1 1222222 1
Q ss_pred hcHHHHhcCCCEEEEcccCC
Q 013273 155 VQIEPALGNASVVICCIGAS 174 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~ 174 (446)
....+++.++|+||..||..
T Consensus 63 ~~~~~~l~~aDvVVita~~~ 82 (162)
T d1up7a1 63 DTFEGAVVDAKYVIFQFRPG 82 (162)
T ss_dssp SSHHHHHTTCSEEEECCCTT
T ss_pred cCcccccCCCCEEEEecccC
Confidence 23567889999999999965
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=92.11 E-value=0.087 Score=46.23 Aligned_cols=35 Identities=26% Similarity=0.160 Sum_probs=31.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
.++|+|.| .|..|..++..|+++|++|+++.|++.
T Consensus 4 ~~kV~IiG-aG~aGl~~A~~L~~~G~~v~v~Er~~~ 38 (265)
T d2voua1 4 TDRIAVVG-GSISGLTAALMLRDAGVDVDVYERSPQ 38 (265)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred CCcEEEEC-cCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 46899999 599999999999999999999998753
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=92.02 E-value=0.083 Score=48.74 Aligned_cols=35 Identities=20% Similarity=0.255 Sum_probs=32.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
+|+|+|.| +|.-|...+..|.+.|++|.++.++..
T Consensus 2 ~KKI~IIG-aG~sGL~aA~~L~k~G~~V~viEk~~~ 36 (314)
T d2bi7a1 2 SKKILIVG-AGFSGAVIGRQLAEKGHQVHIIDQRDH 36 (314)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCEEEEEC-CcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 57899999 699999999999999999999998764
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.95 E-value=0.22 Score=41.76 Aligned_cols=82 Identities=15% Similarity=0.063 Sum_probs=53.2
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCC--CCh
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDL--EKR 154 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl--~d~ 154 (446)
...+++|+|.|.+.-+|+-|+..|+++|+.|+.+..+...... .+ ....-......|+ ...
T Consensus 26 ~l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~----------------~~-~~~~~~~~~~~~~~~~~~ 88 (171)
T d1edza1 26 RLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFT----------------RG-ESLKLNKHHVEDLGEYSE 88 (171)
T ss_dssp TTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEE----------------SC-CCSSCCCCEEEEEEECCH
T ss_pred CCCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccc----------------cc-cceeeeeeccccccccch
Confidence 4678999999999999999999999999999877654311000 00 0000000011122 234
Q ss_pred hcHHHHhcCCCEEEEcccCCC
Q 013273 155 VQIEPALGNASVVICCIGASE 175 (446)
Q Consensus 155 ~~~~~a~~~~D~VI~~Ag~~~ 175 (446)
+.+++....+|+||..+|...
T Consensus 89 ~~lk~~~~~aDIvIsavG~p~ 109 (171)
T d1edza1 89 DLLKKCSLDSDVVITGVPSEN 109 (171)
T ss_dssp HHHHHHHHHCSEEEECCCCTT
T ss_pred hHHhhccccCCEEEEccCCCc
Confidence 557777888999999988644
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=91.94 E-value=0.058 Score=42.66 Aligned_cols=35 Identities=17% Similarity=0.140 Sum_probs=31.6
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|++.
T Consensus 25 p~~~viiG-~G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 25 PKKLVVIG-AGYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp CSEEEESC-CSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred CCeEEEEc-cchHHHHHHHHHHhcCCeEEEEEEccc
Confidence 46899999 599999999999999999999999753
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=91.81 E-value=0.078 Score=46.71 Aligned_cols=34 Identities=21% Similarity=0.131 Sum_probs=31.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.|+|+|.| +|.-|...+.+|++.|++|+++.+++
T Consensus 1 ~KkV~IIG-aG~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIG-AGVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEEC-cCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 37899999 59999999999999999999999865
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=91.61 E-value=0.089 Score=41.73 Aligned_cols=34 Identities=18% Similarity=0.135 Sum_probs=31.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
.++++|.| .|+||..++..|.+.|.+|+++.|.+
T Consensus 26 p~~vvIiG-gG~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 26 PGKLLIIG-GGIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CSEEEEES-CSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCeEEEEC-CCHHHHHHHHHhhcCCCEEEEEEeec
Confidence 46899999 59999999999999999999998865
|
| >d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Ornithine cyclodeaminase species: Pseudomonas putida [TaxId: 303]
Probab=91.50 E-value=0.32 Score=45.26 Aligned_cols=75 Identities=13% Similarity=0.166 Sum_probs=57.8
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHH-CC-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLK-LG-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV 155 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~-~G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~ 155 (446)
.+.+++.|+| +|..++.-++.+.. .+ .+|++.+|++++.+.+.+.++.. .++.+..+ +
T Consensus 126 ~da~~l~iiG-~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~--------------~g~~v~~~-----~ 185 (340)
T d1x7da_ 126 PNARKMALIG-NGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEY--------------SGLTIRRA-----S 185 (340)
T ss_dssp TTCCEEEEEC-CSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTC--------------TTCEEEEC-----S
T ss_pred cCCceEEEEc-ccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhc--------------cCCCceec-----C
Confidence 3457899999 79999988887765 45 68999999999888877765421 45666554 4
Q ss_pred cHHHHhcCCCEEEEccc
Q 013273 156 QIEPALGNASVVICCIG 172 (446)
Q Consensus 156 ~~~~a~~~~D~VI~~Ag 172 (446)
++++++.++|+|+.+.+
T Consensus 186 s~~eav~~ADIi~t~Ta 202 (340)
T d1x7da_ 186 SVAEAVKGVDIITTVTA 202 (340)
T ss_dssp SHHHHHTTCSEEEECCC
T ss_pred CHHHHHhcCCceeeccc
Confidence 58899999999998754
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=91.41 E-value=0.071 Score=47.01 Aligned_cols=33 Identities=21% Similarity=0.085 Sum_probs=30.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|+|+|.|| |.-|...+..|.++|++|+++.++.
T Consensus 1 m~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 1 MNVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CCEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 57999995 9999999999999999999998864
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=91.22 E-value=0.014 Score=48.00 Aligned_cols=39 Identities=26% Similarity=0.110 Sum_probs=28.2
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHH
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQ 122 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~ 122 (446)
|-+.| +|.+|+++++.|.+.++.+.+..|+.++.+.+.+
T Consensus 2 IgfIG-~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~ 40 (153)
T d2i76a2 2 LNFVG-TGTLTRFFLECLKDRYEIGYILSRSIDRARNLAE 40 (153)
T ss_dssp CEEES-CCHHHHHHHHTTC----CCCEECSSHHHHHHHHH
T ss_pred EEEEe-CcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhh
Confidence 34667 8999999999886644445688999998887755
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=91.21 E-value=0.33 Score=39.63 Aligned_cols=35 Identities=26% Similarity=0.284 Sum_probs=29.7
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHC--CCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKL--GFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~--G~~V~~~~R~~ 114 (446)
+++|.|.|+||-||....+-+.+. .++|++++-+.
T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~ 38 (150)
T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANR 38 (150)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESS
T ss_pred CcEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCC
Confidence 478999999999999999999886 48998877543
|
| >d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Glycine oxidase ThiO species: Bacillus sp. [TaxId: 1409]
Probab=91.07 E-value=0.089 Score=46.70 Aligned_cols=31 Identities=26% Similarity=0.145 Sum_probs=29.1
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|+|.| .|.+|..++.+|+++|++|+++.|+.
T Consensus 7 vvIIG-aGi~Gls~A~~La~~G~~V~vlE~~~ 37 (276)
T d1ryia1 7 AVVIG-GGIIGSAIAYYLAKENKNTALFESGT 37 (276)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 99999 59999999999999999999999864
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=90.80 E-value=0.54 Score=40.68 Aligned_cols=103 Identities=13% Similarity=0.078 Sum_probs=63.4
Q ss_pred CEEEEECCCcHHHH-HHHHHHHHC-CCeEE-EEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 81 NLAFVAGATGKVGS-RTVRELLKL-GFRVR-AGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 81 ~~VlVtGatG~IG~-~lv~~L~~~-G~~V~-~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
-+|.|.| +|.+|+ +++..|... +.+|+ +++|++++...+.+.+. ++ ...+.. . .++
T Consensus 34 iriaiIG-~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~---i~----------~~~~~~----~---~d~ 92 (221)
T d1h6da1 34 FGYAIVG-LGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYG---VD----------PRKIYD----Y---SNF 92 (221)
T ss_dssp EEEEEEC-CSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTT---CC----------GGGEEC----S---SSG
T ss_pred EEEEEEc-CcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhc---cc----------cccccc----c---Cch
Confidence 4899999 699996 566666654 67877 45677777766544320 10 011111 1 235
Q ss_pred HHHhc--CCCEEEEcccCCCC----------c-cCCCCCcccchHHHHHHHHHHHHhCCC
Q 013273 158 EPALG--NASVVICCIGASEK----------E-VFDITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 158 ~~a~~--~~D~VI~~Ag~~~~----------~-~~~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
++++. ++|+|+-+.....+ . .---++++..|+.-...|+++++++++
T Consensus 93 ~ell~~~~iD~V~I~tp~~~H~~~~~~al~~gk~v~~EKPla~~~~e~~~l~~~a~~~~~ 152 (221)
T d1h6da1 93 DKIAKDPKIDAVYIILPNSLHAEFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK 152 (221)
T ss_dssp GGGGGCTTCCEEEECSCGGGHHHHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred hhhcccccceeeeeccchhhhhhHHHHhhhcchhhhcCCCccCCHHHHHHHHHHHHhcCC
Confidence 55553 58999877553211 0 001255667889999999999998876
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=90.57 E-value=0.11 Score=46.67 Aligned_cols=35 Identities=20% Similarity=0.219 Sum_probs=31.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
..++|+|.| +|..|...+..|.++|++|+++.++.
T Consensus 29 ~pkkV~IIG-aG~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 29 NPKHVVIVG-AGMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp SCCEEEEEC-CBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCeEEEEC-CCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 456899999 69999999999999999999999865
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=90.53 E-value=0.39 Score=39.48 Aligned_cols=37 Identities=14% Similarity=0.170 Sum_probs=25.3
Q ss_pred CCCCEEEEECCCcHHHHHHH-HHHHHC-CCeEEEE-EcCch
Q 013273 78 KDDNLAFVAGATGKVGSRTV-RELLKL-GFRVRAG-VRSVQ 115 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv-~~L~~~-G~~V~~~-~R~~~ 115 (446)
.++.+|.|.| +|+||+.+. +.|... ..+++++ +|+.+
T Consensus 2 ~kkirvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~ 41 (157)
T d1nvmb1 2 NQKLKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAA 41 (157)
T ss_dssp CSCEEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTT
T ss_pred CCCcEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchh
Confidence 3456899999 999998654 555444 3577776 46554
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=90.31 E-value=0.14 Score=41.83 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~ 114 (446)
+++|+|.| .|++|..++..|.+.| .+|+++.+++
T Consensus 2 gkrivIvG-gG~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 2 GRKVVVVG-GGTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCEEEEEC-CSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCcEEEEC-ccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 57999999 5999999999999987 4788888765
|
| >d1a9xa4 c.30.1.1 (A:556-676) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=90.11 E-value=0.68 Score=36.15 Aligned_cols=90 Identities=13% Similarity=0.059 Sum_probs=59.7
Q ss_pred CCCEEEEECCCc----------HHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 79 DDNLAFVAGATG----------KVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 79 ~~~~VlVtGatG----------~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+.++|||.|+.. +-|.+.+++|.+.|++++++.-|++...- ...-.+-+.
T Consensus 3 ~~kkvlViGsGp~rIGq~~EfDy~~~~a~~aLk~~g~~~IliN~NPeTVst--------------------d~d~aD~lY 62 (121)
T d1a9xa4 3 DREKIMVLGGGPNRIGQGIEFDYCCVHASLALREDGYETIMVNCNPETVST--------------------DYDTSDRLY 62 (121)
T ss_dssp SSCEEEEECCCSCBTTBCHHHHHHHHHHHHHHHHTTCEEEEECCCTTSSTT--------------------STTSSSEEE
T ss_pred CCCEEEEECCCcCcccccchhhHHHHHHHHHHHhcCCeEEEEecChhhhhc--------------------ChhhcCceE
Confidence 457899999632 78899999999999999999999865321 011222233
Q ss_pred cCCCChhcHHHHh--cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC
Q 013273 149 CDLEKRVQIEPAL--GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 149 ~Dl~d~~~~~~a~--~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
..-...+.+.+.+ ++.|.||-..|.- -..||...+.+.|+
T Consensus 63 feplt~e~v~~Ii~~E~p~~ii~~~GGQ----------------talnla~~L~~~gv 104 (121)
T d1a9xa4 63 FEPVTLEDVLEIVRIEKPKGVIVQYGGQ----------------TPLKLARALEAAGV 104 (121)
T ss_dssp CCCCSHHHHHHHHHHHCCSEEECSSSTH----------------HHHTTHHHHHHTTC
T ss_pred EccCCHHHHHHHHHHhCCCEEEeehhhh----------------hHHHHHHHHHHcCC
Confidence 3333456666665 5789888776541 14455566667776
|
| >d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: GDI-like N domain domain: Guanine nucleotide dissociation inhibitor, GDI species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.09 E-value=0.14 Score=43.43 Aligned_cols=32 Identities=22% Similarity=-0.009 Sum_probs=29.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
-|+|.| +|.-|...+..|+++|++|.++.++.
T Consensus 7 DviViG-aG~~Gl~~A~~La~~G~~V~vlE~~~ 38 (297)
T d2bcgg1 7 DVIVLG-TGITECILSGLLSVDGKKVLHIDKQD 38 (297)
T ss_dssp SEEEEC-CSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEEC-cCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 389999 79999999999999999999999975
|
| >d1iuka_ c.2.1.8 (A:) Hypothetical protein TT1466 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Hypothetical protein TT1466 species: Thermus thermophilus [TaxId: 274]
Probab=90.02 E-value=0.43 Score=38.16 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=29.6
Q ss_pred CCCEEEEECCC---cHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 79 DDNLAFVAGAT---GKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 79 ~~~~VlVtGat---G~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
..++|.|.||| +..|..+++.|.+.|++++.+.-+
T Consensus 12 ~pksIAVVGaS~~~~k~g~~v~~~L~~~g~~~~~v~~~ 49 (136)
T d1iuka_ 12 QAKTIAVLGAHKDPSRPAHYVPRYLREQGYRVLPVNPR 49 (136)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHHHHTTCEEEEECGG
T ss_pred CCCeEEEEeecCCCCCchHHHHHHHhcCCCCceEEEec
Confidence 34689999998 679999999999999999876543
|
| >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Transcriptional repressor Rex, C-terminal domain domain: Transcriptional repressor Rex, C-terminal domain species: Thermus aquaticus [TaxId: 271]
Probab=89.77 E-value=0.13 Score=40.74 Aligned_cols=94 Identities=14% Similarity=0.128 Sum_probs=61.1
Q ss_pred CEEEEECCCcHHHHHHHHHHHH-CCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLK-LGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~-~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.+|+|.| +|.+|+.|+++|.. .|++++++..+..... | ....++.++. .+.+.+
T Consensus 4 ~~v~I~G-aG~~G~~l~~~l~~~~~~~iv~fiDdd~~k~------------------G-~~I~Gi~V~~-----~~~l~~ 58 (126)
T d2dt5a2 4 WGLCIVG-MGRLGSALADYPGFGESFELRGFFDVDPEKV------------------G-RPVRGGVIEH-----VDLLPQ 58 (126)
T ss_dssp EEEEEEC-CSHHHHHHHHCSCCCSSEEEEEEEESCTTTT------------------T-CEETTEEEEE-----GGGHHH
T ss_pred ceEEEEc-CCHHHHHHHHhHhhcCCcEEEEEEeCchHhc------------------C-CEECCEEEec-----HHHHHH
Confidence 3799999 59999999998754 4689888776543211 1 1124566653 334555
Q ss_pred Hh-cCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccc
Q 013273 160 AL-GNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGT 215 (446)
Q Consensus 160 a~-~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~ 215 (446)
.. ..++.++-+... ...+.+++.|.++|++.+..++....
T Consensus 59 ~~~~~i~iai~~i~~----------------~~~~~I~d~l~~~gIk~I~~f~~~~l 99 (126)
T d2dt5a2 59 RVPGRIEIALLTVPR----------------EAAQKAADLLVAAGIKGILNFAPVVL 99 (126)
T ss_dssp HSTTTCCEEEECSCH----------------HHHHHHHHHHHHHTCCEEEECSSSCC
T ss_pred HHhhcccEEEEeCCH----------------HHHHHHHHHHHHcCCCEEeecCceee
Confidence 55 345665555422 23567888888899998888876544
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.54 E-value=0.26 Score=42.83 Aligned_cols=37 Identities=24% Similarity=0.478 Sum_probs=33.2
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
...++|+|.| .|..|...+..|+++|++|+++.++..
T Consensus 47 ~~~k~VvIIG-aGpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 47 KNKDSVLIVG-AGPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp SSCCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred cCCceEEEEc-ccHHHHHHHHHHHHhccceeeEeeccc
Confidence 4568999999 599999999999999999999998654
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.35 E-value=0.23 Score=44.11 Aligned_cols=35 Identities=20% Similarity=0.284 Sum_probs=31.1
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
+..+|+|.| +|.-|...+..|.++|++|+++-++.
T Consensus 4 ~~~kViVIG-aG~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 4 KTGKVIIIG-SGVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp CCCEEEEEC-CBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCcEEEEC-CCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 446799999 59999999999999999999998764
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=88.45 E-value=0.28 Score=39.82 Aligned_cols=36 Identities=11% Similarity=0.003 Sum_probs=29.8
Q ss_pred CCEEEEE-CCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 80 DNLAFVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVt-GatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
++.++|. .+.||||..++..|++.|++|+++.+.+.
T Consensus 39 ~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~ 75 (156)
T d1djqa2 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL 75 (156)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred CCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence 3456665 34699999999999999999999999754
|
| >d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavin-dependent monoxygenase SPBP16F5.08c species: Schizosaccharomyces pombe [TaxId: 4896]
Probab=88.07 E-value=0.25 Score=45.31 Aligned_cols=37 Identities=22% Similarity=0.092 Sum_probs=32.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCch
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSVQ 115 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~~ 115 (446)
..+|+|+|.| +|.-|...+..|+++| ++|+++.|+..
T Consensus 2 ~~~KrVaIIG-aG~sGl~~A~~L~~~~~~~~v~vfEk~~~ 40 (335)
T d2gv8a1 2 PTIRKIAIIG-AGPSGLVTAKALLAEKAFDQVTLFERRGS 40 (335)
T ss_dssp CSCCEEEEEC-CSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred CCCCeEEEEC-cCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence 4568999999 5999999999999876 69999999864
|
| >d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Sarcosine oxidase species: Bacillus sp., strain b0618 [TaxId: 1409]
Probab=87.64 E-value=0.23 Score=44.03 Aligned_cols=31 Identities=23% Similarity=0.215 Sum_probs=28.8
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|+|.| .|.+|..++.+|+++|++|+++.|..
T Consensus 6 vvIIG-aGi~Gls~A~~La~~G~~V~viE~~~ 36 (281)
T d2gf3a1 6 VIVVG-AGSMGMAAGYQLAKQGVKTLLVDAFD 36 (281)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred EEEEC-cCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 89999 59999999999999999999999864
|
| >d1w5fa1 c.32.1.1 (A:22-215) Cell-division protein FtsZ {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Thermotoga maritima [TaxId: 2336]
Probab=87.20 E-value=1.4 Score=37.26 Aligned_cols=93 Identities=15% Similarity=0.181 Sum_probs=60.8
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC---CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc-CCC----
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG---FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC-DLE---- 152 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G---~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~-Dl~---- 152 (446)
++|.|.| -|+-|..++..|.+.| .+.+++.-+.+.+.. . .....+..+ +++
T Consensus 1 ~kI~viG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-------~-------------~a~~ki~iG~~~t~G~G 59 (194)
T d1w5fa1 1 LKIKVIG-VGGAGNNAINRMIEIGIHGVEFVAVNTDLQVLEA-------S-------------NADVKIQIGENITRGLG 59 (194)
T ss_dssp CCEEEEE-EHHHHHHHHHHHHHHCCTTEEEEEEESCHHHHHT-------C-------------CCSEEEECCTTTTTTSC
T ss_pred CeEEEEE-eCchHHHHHHHHHHcCCCceEEEEEcCCHHHHhc-------C-------------CcceEEecccccCCCcc
Confidence 3688999 6999999999999976 344555544332221 0 011222222 211
Q ss_pred --------------ChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCC
Q 013273 153 --------------KRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKV 204 (446)
Q Consensus 153 --------------d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v 204 (446)
+.+.+.+.++++|.||-+||..... .--++-.+++.|++.+.
T Consensus 60 ~g~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtgaapviA~~ake~g~ 115 (194)
T d1w5fa1 60 AGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGT----------GTGASPVIAKIAKEMGI 115 (194)
T ss_dssp CTTCHHHHHHHHHHTHHHHHHHTTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTC
T ss_pred cccCchhhHhHHHHHHHHHHHHhcCCCeEEEEEecCCCc----------ccchHHHHHHHHHHcCC
Confidence 3456778889999999999976532 34456678899999886
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=87.14 E-value=0.29 Score=40.29 Aligned_cols=34 Identities=18% Similarity=0.227 Sum_probs=28.5
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
+++|+|.| .|++|..++..|.+.|.+|.++.+..
T Consensus 3 ~~~VvIIG-gG~~G~e~A~~l~~~g~~v~v~~~~~ 36 (185)
T d1q1ra1 3 NDNVVIVG-TGLAGVEVAFGLRASGWEGNIRLVGD 36 (185)
T ss_dssp SCEEEEEC-CSHHHHHHHHHHHHTTCCSEEEEECS
T ss_pred CCCEEEEC-CcHHHHHHHHHHHHcCCceEEEEecC
Confidence 46899999 59999999999999998877665543
|
| >d1nhpa1 c.3.1.5 (A:1-119,A:243-321) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=87.14 E-value=0.31 Score=41.02 Aligned_cols=33 Identities=24% Similarity=0.231 Sum_probs=28.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC--CeEEEEEcCc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG--FRVRAGVRSV 114 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G--~~V~~~~R~~ 114 (446)
|||+|.| .|++|..++..|.+.+ .+|+++.|+.
T Consensus 1 ~KVvIIG-gG~~G~e~A~~l~~~~~~~~V~v~~~~~ 35 (198)
T d1nhpa1 1 MKVIVLG-SSHGGYEAVEELLNLHPDAEIQWYEKGD 35 (198)
T ss_dssp CEEEEEC-SSHHHHHHHHHHHHHCTTSEEEEEESSS
T ss_pred CEEEEEC-CcHHHHHHHHHHHhcCCCCeEEEEeCCC
Confidence 6899999 5999999999999874 6899998864
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.80 E-value=0.76 Score=39.38 Aligned_cols=79 Identities=18% Similarity=0.161 Sum_probs=58.3
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||=.|+ +|..=.+|++.. ..| +|++++-++...+.+.+..+.. +++.++.+|..++..
T Consensus 55 kpg~~VLDlGcG~G~~~~~la~~v-~~g-~V~gvDis~~~i~~a~~~a~~~--------------~ni~~i~~d~~~~~~ 118 (209)
T d1nt2a_ 55 RGDERVLYLGAASGTTVSHLADIV-DEG-IIYAVEYSAKPFEKLLELVRER--------------NNIIPLLFDASKPWK 118 (209)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHT-TTS-EEEEECCCHHHHHHHHHHHHHC--------------SSEEEECSCTTCGGG
T ss_pred CCCCEEEEeCCcCCHHHHHHHHhc-cCC-eEEEEeCCHHHHHHHHHHhhcc--------------CCceEEEeeccCccc
Confidence 44568888775 555555665543 455 9999999998887776655443 689999999999888
Q ss_pred HHHHhcCCCEEEEccc
Q 013273 157 IEPALGNASVVICCIG 172 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag 172 (446)
....+..+|+|+|...
T Consensus 119 ~~~~~~~vd~v~~~~~ 134 (209)
T d1nt2a_ 119 YSGIVEKVDLIYQDIA 134 (209)
T ss_dssp TTTTCCCEEEEEECCC
T ss_pred cccccceEEEEEeccc
Confidence 7777788898887643
|
| >d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Ornithine cyclodeaminase-like domain: Archaeal alanine dehydrogenase species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=86.70 E-value=0.99 Score=41.32 Aligned_cols=72 Identities=13% Similarity=0.078 Sum_probs=52.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHC-C-CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKL-G-FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~-G-~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
+.+++.|+| +|..++..++.|... . .+|++.+|+.++.+.+.+.++.. .+.... +
T Consensus 124 ~~~~l~iiG-aG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~---------------~~~~~~-------~ 180 (320)
T d1omoa_ 124 NSSVFGFIG-CGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDR---------------GISASV-------Q 180 (320)
T ss_dssp TCCEEEEEC-CSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHT---------------TCCEEE-------C
T ss_pred CccEEEEec-CcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhc---------------CCcccc-------c
Confidence 456899998 899999999998863 4 58999999999988887766542 122211 2
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
..+++.++|+||.+...
T Consensus 181 ~~~a~~~aDiV~taT~s 197 (320)
T d1omoa_ 181 PAEEASRCDVLVTTTPS 197 (320)
T ss_dssp CHHHHTSSSEEEECCCC
T ss_pred hhhhhccccEEEEeccC
Confidence 24567889999887543
|
| >d1p9oa_ c.72.3.1 (A:) Phosphopantothenoylcysteine synthetase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Ribokinase-like superfamily: CoaB-like family: CoaB-like domain: Phosphopantothenoylcysteine synthetase species: Human (Homo sapiens) [TaxId: 9606]
Probab=86.69 E-value=0.75 Score=41.65 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=28.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
-+++=--.||..|.+|+++|+.+|++|+++.+.
T Consensus 37 VR~ItN~SSGk~G~alA~~~~~~Ga~V~li~g~ 69 (290)
T d1p9oa_ 37 VRFLDNFSSGRRGATSAEAFLAAGYGVLFLYRA 69 (290)
T ss_dssp SEEEEECCCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred ceEeCCCCchHHHHHHHHHHHHcCCEEEEEecC
Confidence 356666678999999999999999999999765
|
| >d2vapa1 c.32.1.1 (A:23-231) Cell-division protein FtsZ {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=86.43 E-value=2 Score=36.66 Aligned_cols=95 Identities=16% Similarity=0.150 Sum_probs=61.2
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcC-C----
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECD-L---- 151 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~D-l---- 151 (446)
+.+|.|.| -|+-|..++..|.+.|. +.+++.-+.+.+.. . .....+..+. +
T Consensus 15 ~~ki~ViG-vGGaG~n~v~~l~~~~~~~v~~iainTD~~~L~~-------~-------------~~~~ki~ig~~~t~g~ 73 (209)
T d2vapa1 15 KAKITVVG-CGGAGNNTITRLKMEGIEGAKTVAINTDAQQLIR-------T-------------KADKKILIGKKLTRGL 73 (209)
T ss_dssp CCCEEEEE-EHHHHHHHHHHHHHHTCTTEEEEEEESBHHHHHT-------S-------------CCSEEEECCTTTTTTB
T ss_pred CCcEEEEE-eCChHHHHHHHHHHcCCCceEEEEEeCCHHHHhc-------C-------------Ccchhccccccccccc
Confidence 35799999 69999999999999873 44455544332221 0 0112222221 1
Q ss_pred --------------CChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCC
Q 013273 152 --------------EKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVN 205 (446)
Q Consensus 152 --------------~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~ 205 (446)
.+.+.+.+.++++|.||-+||..... .--++-.+++.+++.+..
T Consensus 74 Gag~~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGGT----------Gsgaapvia~~ake~g~l 131 (209)
T d2vapa1 74 GAGGNPKIGEEAAKESAEEIKAAIQDSDMVFITCGLGGGT----------GTGSAPVVAEISKKIGAL 131 (209)
T ss_dssp CCTTCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHTTCE
T ss_pred ccccchHHHHHHHHHHHHHHHHhccCCCEEEEEEeCCCCc----------cccHHHHHHHHHHHcCCc
Confidence 12457778889999999999976532 234566688888888763
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=86.21 E-value=0.32 Score=41.25 Aligned_cols=32 Identities=19% Similarity=0.230 Sum_probs=28.9
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV 114 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~ 114 (446)
+|+|.| +|.-|...+..|.++|+ +|+++.++.
T Consensus 2 ~V~IIG-aG~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVG-AGMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEEC-CBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEEC-CcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 599999 59999999999999995 799999865
|
| >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Polymyxin resistance protein ArnA, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=86.06 E-value=1.2 Score=37.93 Aligned_cols=30 Identities=20% Similarity=0.258 Sum_probs=25.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEE
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGV 111 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~ 111 (446)
|+|+|+| ++..|..+++.|++.|++|..+.
T Consensus 1 Mkiv~~~-~~~~g~~~l~~L~~~g~~I~~Vv 30 (203)
T d2blna2 1 MKTVVFA-YHDMGCLGIEALLAAGYEISAIF 30 (203)
T ss_dssp CEEEEEE-CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CeEEEEe-cCHHHHHHHHHHHHCCCCEEEEE
Confidence 6788997 57789999999999999997665
|
| >d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: N,N-dimethylglycine oxidase species: Arthrobacter globiformis [TaxId: 1665]
Probab=86.04 E-value=0.31 Score=43.73 Aligned_cols=32 Identities=22% Similarity=0.366 Sum_probs=28.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC-eEEEEEcCc
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF-RVRAGVRSV 114 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~-~V~~~~R~~ 114 (446)
.|+|.| .|-+|..++.+|+++|+ +|+++.|+.
T Consensus 3 dViIIG-aGi~G~s~A~~La~~G~~~V~liE~~~ 35 (305)
T d1pj5a2 3 RIVIIG-AGIVGTNLADELVTRGWNNITVLDQGP 35 (305)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHTTCCCEEEECSSC
T ss_pred CEEEEC-cCHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence 599999 59999999999999995 699999874
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.85 E-value=0.25 Score=44.02 Aligned_cols=33 Identities=24% Similarity=0.140 Sum_probs=30.5
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
+|+|.|| |-.|..++..|.+.|++|+++.|.+.
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 5999995 89999999999999999999999864
|
| >d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Escherichia coli [TaxId: 562]
Probab=85.79 E-value=0.25 Score=44.88 Aligned_cols=34 Identities=24% Similarity=0.235 Sum_probs=30.6
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCch
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQ 115 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~ 115 (446)
..|+|.| +|.-|..+++.|++.|++|.++.++..
T Consensus 2 ~dv~IIG-aG~sGl~~A~~L~~~g~~V~iiEk~~~ 35 (298)
T d1i8ta1 2 YDYIIVG-SGLFGAVCANELKKLNKKVLVIEKRNH 35 (298)
T ss_dssp EEEEEEC-CSHHHHHHHHHHGGGTCCEEEECSSSS
T ss_pred ccEEEEC-CcHHHHHHHHHHHhCCCcEEEEECCCC
Confidence 4699999 599999999999999999999998763
|
| >d1jyea_ c.93.1.1 (A:) Lac-repressor (lacR) core (C-terminal domain) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Periplasmic binding protein-like I superfamily: Periplasmic binding protein-like I family: L-arabinose binding protein-like domain: Lac-repressor (lacR) core (C-terminal domain) species: Escherichia coli [TaxId: 562]
Probab=85.76 E-value=6.3 Score=33.96 Aligned_cols=140 Identities=13% Similarity=0.089 Sum_probs=73.1
Q ss_pred cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh--cCCCEE
Q 013273 90 GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL--GNASVV 167 (446)
Q Consensus 90 G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~--~~~D~V 167 (446)
..+-..+-+++.++|++|.+..-+.+..+...+.++.+.-. ...++ ++..+..+.+.+...+ .++=+|
T Consensus 16 ~~i~~~i~~~a~~~Gy~v~v~~~~~~~~~~~~~~l~~l~~~---------~vdgi-Il~~~~~~~~~~~~~~~~~~iPvV 85 (271)
T d1jyea_ 16 SQIVAAILSRADQLGASVVVSMVERSGVEACKTAVHNLLAQ---------RVSGL-IINYPLDDQDAIAVEAACTNVPAL 85 (271)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSSSHHHHHHHHHHHHTT---------TCSCE-EEESCCCHHHHHHHHHHTTTSCEE
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCCCCHHHHHHHHHHHHhc---------CCCEE-EeccccCchhHHHHHHHhcCCCee
Confidence 44667788899999999988664333333333333332100 01223 3344554444443333 345555
Q ss_pred EEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHHHHHhCCC
Q 013273 168 ICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEEALIASGL 247 (446)
Q Consensus 168 I~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~l~~~gl 247 (446)
+... .... ......--|..+...+++.+.+.|.+++.+++..... . ....-....++.+.+.++
T Consensus 86 ~~d~--~~~~--~~~~V~~D~~~~~~~~~~~L~~~G~~~i~~i~~~~~~-----------~-~~~~R~~g~~~~~~~~~~ 149 (271)
T d1jyea_ 86 FLDV--SDQT--PINSIIFSHEDGTRLGVEHLVALGHQQIALLAGPLSS-----------V-SARLRLAGWHKYLTRNQI 149 (271)
T ss_dssp ESSS--CTTS--SSCEEEECHHHHHHHHHHHHHHHTCCSEEEEECCTTS-----------H-HHHHHHHHHHHHHHHTTC
T ss_pred eeec--cccc--cCCccccchhhccccceeeeecccccccccccccccc-----------c-hHHhhhHHHHHHhhhccc
Confidence 5532 1111 1112233477788888888888898999998742210 0 011112223455667787
Q ss_pred CEEEEecC
Q 013273 248 PYTIVRPG 255 (446)
Q Consensus 248 ~~tivRPg 255 (446)
.....+.+
T Consensus 150 ~~~~~~~~ 157 (271)
T d1jyea_ 150 QPIAEREG 157 (271)
T ss_dssp CCSEEEEC
T ss_pred cccceecc
Confidence 77666544
|
| >d1a9xa3 c.30.1.1 (A:1-127) Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Carbamoyl phosphate synthetase (CPS), large subunit PreATP-grasp domains species: Escherichia coli [TaxId: 562]
Probab=85.58 E-value=0.79 Score=36.11 Aligned_cols=75 Identities=16% Similarity=0.169 Sum_probs=53.1
Q ss_pred CCCEEEEECCC----------cHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEE
Q 013273 79 DDNLAFVAGAT----------GKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVE 148 (446)
Q Consensus 79 ~~~~VlVtGat----------G~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~ 148 (446)
+.++|||.|+. -+-+.+.+++|.+.|++++++.-|+....-- ..-.+-+.
T Consensus 6 ~~kkvlilGsGp~~IGq~~EfDy~~~~a~~alke~g~~~iliN~NP~TVstd--------------------~d~aD~lY 65 (127)
T d1a9xa3 6 DIKSILILGAGPIVIGQACEFDYSGAQACKALREEGYRVINVNSNPATIMTD--------------------PEMADATY 65 (127)
T ss_dssp SCCEEEEECCCSCBTTBCTHHHHHHHHHHHHHHHHTCEEEEECSCTTCGGGC--------------------GGGSSEEE
T ss_pred CCCEEEEECCCcCcccccchhHHHHHHHHHHHHHcCCeEEEecCchHhhhcC--------------------hhhcceee
Confidence 45799999973 3678999999999999999999998653210 01122333
Q ss_pred cCCCChhcHHHHh--cCCCEEEEcccC
Q 013273 149 CDLEKRVQIEPAL--GNASVVICCIGA 173 (446)
Q Consensus 149 ~Dl~d~~~~~~a~--~~~D~VI~~Ag~ 173 (446)
..-...+.+.+.+ ++.|.|+-..|.
T Consensus 66 fePlt~e~v~~Ii~~E~pd~il~~~GG 92 (127)
T d1a9xa3 66 IEPIHWEVVRKIIEKERPDAVLPTMGG 92 (127)
T ss_dssp CSCCCHHHHHHHHHHHCCSEEECSSSH
T ss_pred eecCCHHHHHHHHHHhCcCCeEEEeee
Confidence 4444567777776 578999877664
|
| >d1kifa1 c.4.1.2 (A:1-194,A:288-339) D-aminoacid oxidase, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=85.55 E-value=0.066 Score=46.36 Aligned_cols=26 Identities=23% Similarity=0.185 Sum_probs=23.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeE
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRV 107 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V 107 (446)
|+|+|.| .|.+|..++.+|+++|++|
T Consensus 1 mkV~VIG-aGi~GlstA~~L~~~G~~v 26 (246)
T d1kifa1 1 MRVVVIG-AGVIGLSTALCIHERYHSV 26 (246)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHHTTT
T ss_pred CEEEEEC-chHHHHHHHHHHHHCCCCc
Confidence 6899999 5999999999999999753
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=85.36 E-value=0.38 Score=39.77 Aligned_cols=88 Identities=10% Similarity=-0.005 Sum_probs=51.9
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
.+.+||..|.. .|+ .+..|+++|++|++++-++.......+..+..................+.++.+|+.+...
T Consensus 20 ~~~rvLd~GCG--~G~-~a~~la~~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~-- 94 (201)
T d1pjza_ 20 PGARVLVPLCG--KSQ-DMSWLSGQGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTA-- 94 (201)
T ss_dssp TTCEEEETTTC--CSH-HHHHHHHHCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTH--
T ss_pred CCCEEEEecCc--CCH-HHHHHHHcCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccccccc--
Confidence 45689999943 344 5568888999999999999877766554432111000000000012456788888876432
Q ss_pred HHhcCCCEEEEcc
Q 013273 159 PALGNASVVICCI 171 (446)
Q Consensus 159 ~a~~~~D~VI~~A 171 (446)
.....+|.|+...
T Consensus 95 ~~~~~~D~i~~~~ 107 (201)
T d1pjza_ 95 RDIGHCAAFYDRA 107 (201)
T ss_dssp HHHHSEEEEEEES
T ss_pred ccccceeEEEEEe
Confidence 2234568777653
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.32 E-value=0.53 Score=40.96 Aligned_cols=34 Identities=24% Similarity=0.148 Sum_probs=30.2
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCC-CeEEEEEcCch
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLG-FRVRAGVRSVQ 115 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G-~~V~~~~R~~~ 115 (446)
++|+|.| .|..|..++..|.+.| ++|.++.|++.
T Consensus 2 ~~V~IvG-aG~aGl~~A~~L~~~Gi~~V~V~Er~~~ 36 (288)
T d3c96a1 2 IDILIAG-AGIGGLSCALALHQAGIGKVTLLESSSE 36 (288)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred CEEEEEC-cCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence 5799999 5999999999999999 58999998764
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=85.32 E-value=1.9 Score=35.49 Aligned_cols=39 Identities=21% Similarity=0.215 Sum_probs=30.9
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
++|.|-| -|.|||.+.|.|..++.+|+++.-. ...+.+.
T Consensus 1 ikigING-fGRIGR~~~R~l~~~~i~iv~INd~-~~~~~~a 39 (168)
T d2g82a1 1 MKVGING-FGRIGRQVFRILHSRGVEVALINDL-TDNKTLA 39 (168)
T ss_dssp CEEEEEC-CSHHHHHHHHHHHHHTCCEEEEECS-SCHHHHH
T ss_pred CEEEEEC-CcHHHHHHHHHHhcCCCEEEEECCC-cchhhhh
Confidence 4788888 8999999999999999999887753 3444443
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=85.27 E-value=1 Score=41.24 Aligned_cols=142 Identities=14% Similarity=0.005 Sum_probs=77.8
Q ss_pred CCCEEEEE-CCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc-
Q 013273 79 DDNLAFVA-GATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ- 156 (446)
Q Consensus 79 ~~~~VlVt-GatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~- 156 (446)
.+++||=. .++|+.+.++ +..+.+|+.++.++.......+..+.. | ..+++++.+|..+...
T Consensus 145 ~g~rVLDl~~gtG~~s~~~----a~g~~~V~~vD~s~~al~~a~~n~~~n---------g---l~~~~~i~~d~~~~~~~ 208 (318)
T d1wxxa2 145 RGERALDVFSYAGGFALHL----ALGFREVVAVDSSAEALRRAEENARLN---------G---LGNVRVLEANAFDLLRR 208 (318)
T ss_dssp CEEEEEEETCTTTHHHHHH----HHHEEEEEEEESCHHHHHHHHHHHHHT---------T---CTTEEEEESCHHHHHHH
T ss_pred CCCeeeccCCCCcHHHHHH----HhcCCcEEeecchHHHHHHHHHHHHHc---------C---CCCcceeeccHHHHhhh
Confidence 44566644 5567666544 344679999999998877766554432 1 2468999999866322
Q ss_pred HHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhC--CCCEEEEEccccccCCCCchhhhchhhHHHHH
Q 013273 157 IEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIA--KVNHFIMVSSLGTNKFGFPAAILNLFWGVLLW 234 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~--~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~s 234 (446)
+...-+.+|.||.+.........+ ..........|++.+.+. ..+.+|+.| ..... .....
T Consensus 209 ~~~~~~~fD~Vi~DpP~~~~~~~~----~~~~~~~~~~l~~~a~~lLkpGG~Lv~~s-cs~~~------------~~~~f 271 (318)
T d1wxxa2 209 LEKEGERFDLVVLDPPAFAKGKKD----VERAYRAYKEVNLRAIKLLKEGGILATAS-CSHHM------------TEPLF 271 (318)
T ss_dssp HHHTTCCEEEEEECCCCSCCSTTS----HHHHHHHHHHHHHHHHHTEEEEEEEEEEE-CCTTS------------CHHHH
T ss_pred hHhhhcCCCEEEEcCCccccchHH----HHHHHHHHHHHHHHHHHHcCCCCEEEEEe-CCccc------------CHHHH
Confidence 222235689999987643322211 111233344555555443 112455443 22100 01122
Q ss_pred HHHHHHHHHhCCCCEEEEe
Q 013273 235 KRKAEEALIASGLPYTIVR 253 (446)
Q Consensus 235 K~~~E~~l~~~gl~~tivR 253 (446)
...+.+.+...|..+.++.
T Consensus 272 ~~~v~~a~~~a~~~~~~~~ 290 (318)
T d1wxxa2 272 YAMVAEAAQDAHRLLRVVE 290 (318)
T ss_dssp HHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEE
Confidence 3445555566787777765
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=85.17 E-value=1.8 Score=36.88 Aligned_cols=80 Identities=19% Similarity=0.131 Sum_probs=51.5
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||-.|+ +|++...+++ +...+..|+.++.++...+...+.++.. ...++.++.+|..+.-
T Consensus 74 ~~g~~VLdiG~GtG~~s~~la~-~~~~~g~V~~id~~~~~~~~a~~~~~~~------------~~~n~~~~~~d~~~~~- 139 (213)
T d1dl5a1 74 DKGMRVLEIGGGTGYNAAVMSR-VVGEKGLVVSVEYSRKICEIAKRNVERL------------GIENVIFVCGDGYYGV- 139 (213)
T ss_dssp CTTCEEEEECCTTSHHHHHHHH-HHCTTCEEEEEESCHHHHHHHHHHHHHT------------TCCSEEEEESCGGGCC-
T ss_pred cccceEEEecCccchhHHHHHH-HhCCCCcEEEeecchhhHHHhhhhHhhh------------cccccccccCchHHcc-
Confidence 45668887774 4454444444 3444569999999988777766655543 1257888888865421
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
..-+.+|.|+.+++.
T Consensus 140 --~~~~~fD~I~~~~~~ 154 (213)
T d1dl5a1 140 --PEFSPYDVIFVTVGV 154 (213)
T ss_dssp --GGGCCEEEEEECSBB
T ss_pred --ccccchhhhhhhccH
Confidence 112468999988764
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=85.06 E-value=0.54 Score=41.48 Aligned_cols=35 Identities=29% Similarity=0.310 Sum_probs=31.5
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R 112 (446)
..++++|+|-| -|.+|+++++.|.+.|++|+.++.
T Consensus 28 ~l~g~~v~IqG-fGnVG~~~a~~L~~~Gakvv~vsD 62 (242)
T d1v9la1 28 GIEGKTVAIQG-MGNVGRWTAYWLEKMGAKVIAVSD 62 (242)
T ss_dssp CCTTCEEEEEC-CSHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEeec
Confidence 36788999999 899999999999999999988774
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=84.82 E-value=5.1 Score=34.37 Aligned_cols=78 Identities=17% Similarity=0.072 Sum_probs=54.8
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||=.|+ +|+.-.+|++. ... ..|++++-++...+.+.+..+ ..+++.++.+|..++..
T Consensus 73 kpG~~VLDlGcGsG~~~~~la~~-~~~-g~V~aVDiS~~~i~~a~~~a~--------------~~~ni~~i~~d~~~~~~ 136 (230)
T d1g8sa_ 73 KRDSKILYLGASAGTTPSHVADI-ADK-GIVYAIEYAPRIMRELLDACA--------------ERENIIPILGDANKPQE 136 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHH-TTT-SEEEEEESCHHHHHHHHHHTT--------------TCTTEEEEECCTTCGGG
T ss_pred CCCCEEEEeCEEcCHHHHHHHHh-CCC-CEEEEEeCcHHHHHHHHHHHh--------------hhcccceEEEeeccCcc
Confidence 45678888874 67777777774 333 499999999877766544321 23788999999999887
Q ss_pred HHHHhcCCCEEEEcc
Q 013273 157 IEPALGNASVVICCI 171 (446)
Q Consensus 157 ~~~a~~~~D~VI~~A 171 (446)
.......+|++++..
T Consensus 137 ~~~~~~~v~~i~~~~ 151 (230)
T d1g8sa_ 137 YANIVEKVDVIYEDV 151 (230)
T ss_dssp GTTTCCCEEEEEECC
T ss_pred cccccceeEEeeccc
Confidence 765555566666653
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=84.78 E-value=0.66 Score=42.03 Aligned_cols=35 Identities=29% Similarity=0.320 Sum_probs=31.4
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R 112 (446)
..++++|+|-| .|.+|+++++.|.+.|++|+.++-
T Consensus 33 ~L~gktvaIqG-fGnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 33 GFGDKTFAVQG-FGNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp SSTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHCCCEEEEEEc
Confidence 35778999999 799999999999999999998774
|
| >d1uwva2 c.66.1.40 (A:75-432) rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: (Uracil-5-)-methyltransferase domain: rRNA (Uracil-5-)-methyltransferase RumA, catalytic domain species: Escherichia coli [TaxId: 562]
Probab=84.50 E-value=2.3 Score=39.03 Aligned_cols=128 Identities=16% Similarity=0.070 Sum_probs=81.0
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChh-cHHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRV-QIEPA 160 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~-~~~~a 160 (446)
.+=+.+|+|.+|..| ++.+.+|+++.-+++....+.+-.+ +-| ..+++++.+|+.+.- .....
T Consensus 216 vlDLycG~G~fsl~L----a~~~~~V~gvE~~~~ai~~A~~na~---~n~---------i~n~~~~~~~~~~~~~~~~~~ 279 (358)
T d1uwva2 216 VLDLFCGMGNFTLPL----ATQAASVVGVEGVPALVEKGQQNAR---LNG---------LQNVTFYHENLEEDVTKQPWA 279 (358)
T ss_dssp EEEESCTTTTTHHHH----HTTSSEEEEEESCHHHHHHHHHHHH---HTT---------CCSEEEEECCTTSCCSSSGGG
T ss_pred EEEecccccccchhc----cccccEEEeccCcHHHHHHHHHhHH---hcc---------cccceeeecchhhhhhhhhhh
Confidence 344668899999876 4577899999998887766544322 222 268999999987632 22233
Q ss_pred hcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEEEEEccccccCCCCchhhhchhhHHHHHHHHHHH
Q 013273 161 LGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHFIMVSSLGTNKFGFPAAILNLFWGVLLWKRKAEE 240 (446)
Q Consensus 161 ~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~V~vSS~~~~~~~~~~~~~~~~~~Y~~sK~~~E~ 240 (446)
...+|+||-.=.-. |...+++...+.+.++|||||- +|.+ ..+.+.
T Consensus 280 ~~~~d~vilDPPR~----------------G~~~~~~~l~~~~~~~ivYVSC-------------np~T----laRDl~- 325 (358)
T d1uwva2 280 KNGFDKVLLDPARA----------------GAAGVMQQIIKLEPIRIVYVSC-------------NPAT----LARDSE- 325 (358)
T ss_dssp TTCCSEEEECCCTT----------------CCHHHHHHHHHHCCSEEEEEES-------------CHHH----HHHHHH-
T ss_pred hccCceEEeCCCCc----------------cHHHHHHHHHHcCCCEEEEEeC-------------CHHH----HHHHHH-
Confidence 35679888663211 1123455566667899999994 2211 112222
Q ss_pred HHHhCCCCEEEEecCCccC
Q 013273 241 ALIASGLPYTIVRPGGMER 259 (446)
Q Consensus 241 ~l~~~gl~~tivRPg~v~g 259 (446)
.|.+.|....-++|-.+|-
T Consensus 326 ~l~~~gy~l~~i~~~D~FP 344 (358)
T d1uwva2 326 ALLKAGYTIARLAMLDMFP 344 (358)
T ss_dssp HHHHTTCEEEEEEEECCST
T ss_pred HHHHCCCeEeEEEEEecCC
Confidence 2445788888888888873
|
| >d1k3ta1 c.2.1.3 (A:1-164,A:334-359) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Trypanosoma cruzi [TaxId: 5693]
Probab=84.01 E-value=4.7 Score=33.71 Aligned_cols=40 Identities=25% Similarity=0.239 Sum_probs=27.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCC-----CeEEEEEcCchhHHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLG-----FRVRAGVRSVQRAENL 120 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G-----~~V~~~~R~~~~~~~l 120 (446)
.++|.|-| -|.|||.+.|.+++++ .+|+.+.......+.+
T Consensus 2 ~ikigING-FGRIGR~vlR~~~~~~~~~~~i~iv~Ind~~~~~~~~ 46 (190)
T d1k3ta1 2 PIKVGING-FGRIGRMVFQALCEDGLLGTEIDVVAVVDMNTDAEYF 46 (190)
T ss_dssp CEEEEEEC-CSHHHHHHHHHHHHTTCBTTTEEEEEEEESCCCHHHH
T ss_pred CeEEEEEC-CChHHHHHHHHHHHcCCCCCCeEEEEEecCCCCHHHH
Confidence 35899999 8999999999999875 3555544332333433
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=83.98 E-value=0.66 Score=35.56 Aligned_cols=35 Identities=17% Similarity=0.102 Sum_probs=28.8
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~---~G~~V~~~~R~~~ 115 (446)
.++++|.| .|++|..++..|.+ .|.+|+++.|.+.
T Consensus 18 p~~v~IiG-gG~ig~E~A~~l~~~~~~g~~Vtli~~~~~ 55 (117)
T d1feca2 18 PKRALCVG-GGYISIEFAGIFNAYKARGGQVDLAYRGDM 55 (117)
T ss_dssp CSEEEEEC-SSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred CCeEEEEC-CChHHHHHHHHhHhhcccccccceeccccc
Confidence 46899999 59999999987654 4889999998653
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=83.81 E-value=1.9 Score=35.78 Aligned_cols=74 Identities=19% Similarity=0.211 Sum_probs=51.0
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
..+||=.|+ | .|+ .+..|+++|++|++++-++...+.+.+..+.. + ..++++..+|+.+..- .
T Consensus 31 ~grvLDiGc-G-~G~-~~~~la~~g~~v~gvD~s~~~l~~a~~~~~~~---------~---~~~~~~~~~d~~~~~~-~- 93 (198)
T d2i6ga1 31 PGRTLDLGC-G-NGR-NSLYLAANGYDVTAWDKNPASMANLERIKAAE---------G---LDNLQTDLVDLNTLTF-D- 93 (198)
T ss_dssp SCEEEEETC-T-TSH-HHHHHHHTTCEEEEEESCHHHHHHHHHHHHHT---------T---CTTEEEEECCTTTCCC-C-
T ss_pred CCcEEEECC-C-CCH-HHHHHHHHhhhhccccCcHHHHHHHHHHhhhc---------c---ccchhhhheecccccc-c-
Confidence 457999984 3 565 44677889999999999988777655444332 1 2468888889876431 1
Q ss_pred HhcCCCEEEEccc
Q 013273 160 ALGNASVVICCIG 172 (446)
Q Consensus 160 a~~~~D~VI~~Ag 172 (446)
+.+|+|+.+.-
T Consensus 94 --~~fD~I~~~~~ 104 (198)
T d2i6ga1 94 --GEYDFILSTVV 104 (198)
T ss_dssp --CCEEEEEEESC
T ss_pred --ccccEEEEeee
Confidence 45799987643
|
| >d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monoamine oxidase B species: Human (Homo sapiens) [TaxId: 9606]
Probab=83.54 E-value=0.54 Score=42.15 Aligned_cols=31 Identities=23% Similarity=0.204 Sum_probs=28.7
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
|+|.| +|.-|...+..|+++|++|+++.++.
T Consensus 2 ViVIG-aG~aGL~aA~~L~~~G~~V~VlE~~~ 32 (383)
T d2v5za1 2 VVVVG-GGISGMAAAKLLHDSGLNVVVLEARD 32 (383)
T ss_dssp EEEEC-CBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEEC-CCHHHHHHHHHHHhCCCCEEEEecCC
Confidence 78999 59999999999999999999999765
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=83.23 E-value=2.4 Score=37.34 Aligned_cols=77 Identities=12% Similarity=0.024 Sum_probs=50.5
Q ss_pred CCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.+||=.|+ +|.+...|++. .|.+|++++-++...+...+......+. .+++++.+|..+.. +
T Consensus 67 ~~~~vLDiGcG~G~~~~~la~~---~~~~v~gvD~s~~~i~~a~~~~~~~gl~-----------~~v~~~~~d~~~l~-~ 131 (282)
T d2o57a1 67 RQAKGLDLGAGYGGAARFLVRK---FGVSIDCLNIAPVQNKRNEEYNNQAGLA-----------DNITVKYGSFLEIP-C 131 (282)
T ss_dssp TTCEEEEETCTTSHHHHHHHHH---HCCEEEEEESCHHHHHHHHHHHHHHTCT-----------TTEEEEECCTTSCS-S
T ss_pred CCCEEEEeCCCCcHHHhhhhcc---CCcEEEEEeccchhhhhhhccccccccc-----------cccccccccccccc-c
Confidence 4568998885 55544444432 2889999998887766655554443222 58999999998743 1
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
. -+.+|+|+.+-.
T Consensus 132 ~--~~sfD~V~~~~~ 144 (282)
T d2o57a1 132 E--DNSYDFIWSQDA 144 (282)
T ss_dssp C--TTCEEEEEEESC
T ss_pred c--ccccchhhccch
Confidence 1 145899987643
|
| >d1xhca1 c.3.1.5 (A:1-103,A:226-289) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=83.11 E-value=0.56 Score=37.87 Aligned_cols=31 Identities=16% Similarity=0.219 Sum_probs=26.6
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCc
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSV 114 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~ 114 (446)
+|+|.| .|++|..++..|. ++.+|+++.|.+
T Consensus 2 rVvIIG-gG~~G~e~A~~l~-~~~~Vtvv~~~~ 32 (167)
T d1xhca1 2 KVVIVG-NGPGGFELAKQLS-QTYEVTVIDKEP 32 (167)
T ss_dssp EEEEEC-CSHHHHHHHHHHT-TTSEEEEECSSS
T ss_pred eEEEEC-CcHHHHHHHHHHH-cCCCEEEEeccc
Confidence 799999 5999999999985 578999998754
|
| >d2bisa1 c.87.1.8 (A:1-437) Glycogen synthase 1, GlgA {Pyrococcus abyssi [TaxId: 29292]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: Glycosyl transferases group 1 domain: Glycogen synthase 1, GlgA species: Pyrococcus abyssi [TaxId: 29292]
Probab=83.05 E-value=0.57 Score=43.65 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=25.0
Q ss_pred CEEEEECC------CcHHH---HHHHHHHHHCCCeEEEEEc
Q 013273 81 NLAFVAGA------TGKVG---SRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 81 ~~VlVtGa------tG~IG---~~lv~~L~~~G~~V~~~~R 112 (446)
|+||+++. +|++| ..|+++|+++||+|++++.
T Consensus 1 MkIl~~~~~~pP~~~GG~~~~~~~La~~L~~~Gh~V~Vvtp 41 (437)
T d2bisa1 1 MKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVLVFTP 41 (437)
T ss_dssp CEEEEECSCCTTCCSSSHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CEEEEECCccCCcccCCHHHHHHHHHHHHHHcCCEEEEEec
Confidence 57777664 47776 5568999999999999874
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=82.83 E-value=3.1 Score=34.27 Aligned_cols=76 Identities=18% Similarity=0.152 Sum_probs=50.5
Q ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 79 DDNLAFVAG-ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 79 ~~~~VlVtG-atG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
.+.+||=.| |+|.++.+ |++.+.+|++++.++...+...+.+++..+. .+++++.+|..+ +
T Consensus 33 ~g~~VLDiGcGsG~~s~~----lA~~~~~V~avD~~~~~l~~a~~n~~~~gl~-----------~~v~~~~gda~~---~ 94 (186)
T d1l3ia_ 33 KNDVAVDVGCGTGGVTLE----LAGRVRRVYAIDRNPEAISTTEMNLQRHGLG-----------DNVTLMEGDAPE---A 94 (186)
T ss_dssp TTCEEEEESCTTSHHHHH----HHTTSSEEEEEESCHHHHHHHHHHHHHTTCC-----------TTEEEEESCHHH---H
T ss_pred CCCEEEEEECCeEccccc----ccccceEEEEecCCHHHHHHHHHHHHHcCCC-----------cceEEEECchhh---c
Confidence 345677665 45555543 4566789999999998888777666554221 589999998643 2
Q ss_pred HHHhcCCCEEEEccc
Q 013273 158 EPALGNASVVICCIG 172 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag 172 (446)
..-...+|.||.+.+
T Consensus 95 ~~~~~~~D~v~~~~~ 109 (186)
T d1l3ia_ 95 LCKIPDIDIAVVGGS 109 (186)
T ss_dssp HTTSCCEEEEEESCC
T ss_pred ccccCCcCEEEEeCc
Confidence 222357899997643
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=82.78 E-value=0.63 Score=35.77 Aligned_cols=35 Identities=11% Similarity=0.013 Sum_probs=27.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH---CCCeEEEEEcCch
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK---LGFRVRAGVRSVQ 115 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~---~G~~V~~~~R~~~ 115 (446)
.++++|.|| |++|..++..|.+ +|.+|+++.|.+.
T Consensus 20 p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~ 57 (117)
T d1aoga2 20 PRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM 57 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS
T ss_pred CCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch
Confidence 368999995 9999999976654 4578999998653
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=82.58 E-value=2.4 Score=36.28 Aligned_cols=78 Identities=19% Similarity=0.176 Sum_probs=51.6
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+.+||..|+ ||+.- +++..|. |.+|+.+.++++-.....+.++.. ...++.++.+|..+-.
T Consensus 77 ~~g~~VLeIGsGsGY~t-aila~l~--g~~V~~ie~~~~l~~~a~~~l~~~------------g~~nv~~~~gd~~~g~- 140 (215)
T d1jg1a_ 77 KPGMNILEVGTGSGWNA-ALISEIV--KTDVYTIERIPELVEFAKRNLERA------------GVKNVHVILGDGSKGF- 140 (215)
T ss_dssp CTTCCEEEECCTTSHHH-HHHHHHH--CSCEEEEESCHHHHHHHHHHHHHT------------TCCSEEEEESCGGGCC-
T ss_pred CccceEEEecCCCChhH-HHHHHhh--CceeEEEeccHHHHHHHHHHHHHc------------CCceeEEEECccccCC-
Confidence 34567887775 45544 4444454 567999999987776666655543 1268999999986421
Q ss_pred HHHHhcCCCEEEEcccC
Q 013273 157 IEPALGNASVVICCIGA 173 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag~ 173 (446)
..-..+|.||-+++.
T Consensus 141 --~~~~pfD~Iiv~~a~ 155 (215)
T d1jg1a_ 141 --PPKAPYDVIIVTAGA 155 (215)
T ss_dssp --GGGCCEEEEEECSBB
T ss_pred --cccCcceeEEeeccc
Confidence 123668999888765
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.57 E-value=2.3 Score=36.54 Aligned_cols=86 Identities=10% Similarity=-0.006 Sum_probs=58.0
Q ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcH
Q 013273 78 KDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQI 157 (446)
Q Consensus 78 ~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~ 157 (446)
..+.+||-.|...+--.++...+.....+|+.++++++-.+...+.+++..+... ...++.++.+|..+..
T Consensus 75 ~~g~~VLdiG~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~-------~~~~~~~~~gD~~~~~-- 145 (224)
T d1i1na_ 75 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLL-------SSGRVQLVVGDGRMGY-- 145 (224)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHH-------HTSSEEEEESCGGGCC--
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccc-------cccceEEEEeeccccc--
Confidence 3567899999765555566666777677999999999877776666654432211 1257888888875421
Q ss_pred HHHhcCCCEEEEcccC
Q 013273 158 EPALGNASVVICCIGA 173 (446)
Q Consensus 158 ~~a~~~~D~VI~~Ag~ 173 (446)
.--..+|.|+.+++.
T Consensus 146 -~~~~~fD~I~~~~~~ 160 (224)
T d1i1na_ 146 -AEEAPYDAIHVGAAA 160 (224)
T ss_dssp -GGGCCEEEEEECSBB
T ss_pred -chhhhhhhhhhhcch
Confidence 112468999988765
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=82.47 E-value=2.1 Score=35.28 Aligned_cols=39 Identities=26% Similarity=0.326 Sum_probs=29.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHH
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLV 121 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~ 121 (446)
+|.|-| =|.|||.+.|.+++++.+|+++.-.....+.+.
T Consensus 2 kIgING-fGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~ 40 (169)
T d1dssg1 2 KIGING-FGRIGRLVLRAALEMGAQVVAVNDPFIALEYMV 40 (169)
T ss_dssp CEEEEC-CSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHH
T ss_pred eEEEEC-CcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHH
Confidence 578888 899999999999999998888765333334333
|
| >d1h9aa1 c.2.1.3 (A:1-181,A:413-426) Glucose 6-phosphate dehydrogenase, N-terminal domain {Leuconostoc mesenteroides [TaxId: 1245]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose 6-phosphate dehydrogenase, N-terminal domain species: Leuconostoc mesenteroides [TaxId: 1245]
Probab=82.34 E-value=5.9 Score=33.13 Aligned_cols=45 Identities=27% Similarity=0.431 Sum_probs=30.8
Q ss_pred EEEEECCCcHHHHHHHH----HHHHCC-----CeEEEEEcCchhHHHHHHHHHH
Q 013273 82 LAFVAGATGKVGSRTVR----ELLKLG-----FRVRAGVRSVQRAENLVQSVKQ 126 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~----~L~~~G-----~~V~~~~R~~~~~~~l~~~~~~ 126 (446)
.++|+||||-+-+.-+- .|...| +.|+.+.|++-..+...+.++.
T Consensus 7 ~lVIFGaTGDLa~RKL~PAL~~L~~~g~lp~~~~Iig~aR~~~~~e~f~~~v~~ 60 (195)
T d1h9aa1 7 LVTFFGGTGDLAKRKLYPSVFNLYKKGYLQKHFAIVGTARQALNDDEFKQLVRD 60 (195)
T ss_dssp EEEEETTTSHHHHHTHHHHHHHHHHTTSSCSSEEEEEEESSCCCHHHHHHHHHH
T ss_pred EEEEECcccHHHHhHHHHHHHHHHHcCCCCCCCEEEEEECCcCcHHHHHHHHHH
Confidence 35588999999886542 333444 6899999988666665555543
|
| >d1n4wa1 c.3.1.2 (A:9-318,A:451-507) Cholesterol oxidase of GMC family {Streptomyces sp. [TaxId: 1931]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Cholesterol oxidase of GMC family species: Streptomyces sp. [TaxId: 1931]
Probab=82.33 E-value=0.59 Score=43.02 Aligned_cols=30 Identities=23% Similarity=0.137 Sum_probs=28.3
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcC
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRS 113 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~ 113 (446)
|+|.| +|+-|..++.+|++.|++|.++-|-
T Consensus 5 VIVVG-sG~aG~v~A~rLaeaG~~VlvLEaG 34 (367)
T d1n4wa1 5 AVVIG-TGYGAAVSALRLGEAGVQTLMLEMG 34 (367)
T ss_dssp EEEEC-CSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEeC-cCHHHHHHHHHHHHCcCeEEEEecC
Confidence 88999 7999999999999999999999984
|
| >d1nv8a_ c.66.1.30 (A:) N5-glutamine methyltransferase, HemK {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: N5-glutamine methyltransferase, HemK domain: N5-glutamine methyltransferase, HemK species: Thermotoga maritima [TaxId: 2336]
Probab=82.11 E-value=3.2 Score=36.86 Aligned_cols=77 Identities=8% Similarity=0.059 Sum_probs=50.2
Q ss_pred CEEE-EECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHH
Q 013273 81 NLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEP 159 (446)
Q Consensus 81 ~~Vl-VtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~ 159 (446)
.+++ +.||+|-||..+++ ..+.+|++++.++....-..+-.+..++ ..++.+..+|+.+. +..
T Consensus 112 ~~vld~g~GsG~i~~~la~---~~~~~v~a~Dis~~Al~~A~~Na~~~~~-----------~~~~~i~~~~~~~~--~~~ 175 (271)
T d1nv8a_ 112 KTVADIGTGSGAIGVSVAK---FSDAIVFATDVSSKAVEIARKNAERHGV-----------SDRFFVRKGEFLEP--FKE 175 (271)
T ss_dssp CEEEEESCTTSHHHHHHHH---HSSCEEEEEESCHHHHHHHHHHHHHTTC-----------TTSEEEEESSTTGG--GGG
T ss_pred cEEEEeeeeeehhhhhhhh---cccceeeechhhhhHHHHHHHHHHHcCC-----------CceeEEeecccccc--ccc
Confidence 4555 55556666666542 3568999999998877655444333211 15688889998753 334
Q ss_pred HhcCCCEEEEcccC
Q 013273 160 ALGNASVVICCIGA 173 (446)
Q Consensus 160 a~~~~D~VI~~Ag~ 173 (446)
..+.+|+||.|-..
T Consensus 176 ~~~~fDlIVsNPPY 189 (271)
T d1nv8a_ 176 KFASIEMILSNPPY 189 (271)
T ss_dssp GTTTCCEEEECCCC
T ss_pred ccCcccEEEEcccc
Confidence 45789999999653
|
| >d2csua3 c.23.4.1 (A:291-453) Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Flavodoxin-like superfamily: Succinyl-CoA synthetase domains family: Succinyl-CoA synthetase domains domain: Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=82.02 E-value=6.8 Score=31.25 Aligned_cols=30 Identities=27% Similarity=0.316 Sum_probs=25.9
Q ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCeEEE
Q 013273 80 DNLAFVAGATGKVGSRTVRELLKLGFRVRA 109 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~~G~~V~~ 109 (446)
+++|.|.+.+|+.|.-++..+.+.|.++--
T Consensus 3 G~rvaiit~sGG~~~l~aD~~~~~Gl~l~~ 32 (163)
T d2csua3 3 GNKVAIMTNAGGPGVLTADELDKRGLKLAT 32 (163)
T ss_dssp SSEEEEEESCHHHHHHHHHHHHTTTCEECC
T ss_pred CCeEEEEECChHHHHHHHHHHHHcCCccCC
Confidence 567889999999999999999999977643
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=82.01 E-value=0.61 Score=41.47 Aligned_cols=35 Identities=20% Similarity=0.206 Sum_probs=31.3
Q ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc
Q 013273 77 SKDDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 77 ~~~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R 112 (446)
..++++|+|-| .|.+|+++++.|.+.|++|+.++.
T Consensus 33 ~l~g~~v~IQG-fGnVG~~~a~~L~e~GakvvavsD 67 (255)
T d1bgva1 33 TLVGKTVALAG-FGNVAWGAAKKLAELGAKAVTLSG 67 (255)
T ss_dssp CSTTCEEEECC-SSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred CCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEec
Confidence 35678999999 799999999999999999998764
|
| >d1d7ya1 c.3.1.5 (A:5-115,A:237-308) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=81.79 E-value=0.3 Score=40.43 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=25.5
Q ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc
Q 013273 81 NLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 81 ~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R 112 (446)
.+|+|.| .|++|..++..|.+.|.+|.++.+
T Consensus 4 a~VvIIG-gG~~G~e~A~~l~~~g~~v~i~~~ 34 (183)
T d1d7ya1 4 APVVVLG-AGLASVSFVAELRQAGYQGLITVV 34 (183)
T ss_dssp SSEEEEC-CSHHHHHHHHHHHHHTCCSCEEEE
T ss_pred CCEEEEC-ccHHHHHHHHHHHhcCCceEEEEE
Confidence 3599999 699999999999999977655544
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=81.65 E-value=0.96 Score=38.23 Aligned_cols=78 Identities=10% Similarity=0.079 Sum_probs=55.9
Q ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHHHHh-
Q 013273 83 AFVAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIEPAL- 161 (446)
Q Consensus 83 VlVtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~~a~- 161 (446)
+=+|.|+|+.-.++++.+ . +.+|+++++++.......+.++.. ..++.++.++..+...+..-+
T Consensus 28 lD~t~G~Gghs~~il~~~-~-~~~vi~~D~d~~~l~~a~~~l~~~-------------~~r~~~~~~~f~~~~~~~~~~~ 92 (192)
T d1m6ya2 28 LDCTVGEGGHSRAILEHC-P-GCRIIGIDVDSEVLRIAEEKLKEF-------------SDRVSLFKVSYREADFLLKTLG 92 (192)
T ss_dssp EETTCTTSHHHHHHHHHC-T-TCEEEEEESCHHHHHHHHHHTGGG-------------TTTEEEEECCGGGHHHHHHHTT
T ss_pred EEecCCCcHHHHHHHhcC-C-CCeEEEeechHHHHHHHHHhhccc-------------cccccchhHHHhhHHHHHHHcC
Confidence 345667777777777765 3 468999999998777655543322 268999999998866665443
Q ss_pred -cCCCEEEEcccCCC
Q 013273 162 -GNASVVICCIGASE 175 (446)
Q Consensus 162 -~~~D~VI~~Ag~~~ 175 (446)
..+|.|+--.|.+.
T Consensus 93 ~~~vdgIl~DlGvSs 107 (192)
T d1m6ya2 93 IEKVDGILMDLGVST 107 (192)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCcceeeeccchhH
Confidence 67899988888753
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=81.23 E-value=4.1 Score=34.88 Aligned_cols=86 Identities=15% Similarity=0.064 Sum_probs=54.2
Q ss_pred CCCCEEEEECC-CcHHHHHHHHHHHHCC----CeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCC
Q 013273 78 KDDNLAFVAGA-TGKVGSRTVRELLKLG----FRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLE 152 (446)
Q Consensus 78 ~~~~~VlVtGa-tG~IG~~lv~~L~~~G----~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~ 152 (446)
..+.+||..|. ||+.-.-+++.+...| .+|+.+.++++-.....+.+....+.. ....++.++.+|..
T Consensus 79 ~~g~~VLeIGtGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~-------~~~~nv~~~~~d~~ 151 (223)
T d1r18a_ 79 KPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM-------LDSGQLLIVEGDGR 151 (223)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH-------HHHTSEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhh-------cCccEEEEEecccc
Confidence 34578999985 6666666666665666 489999998876655444333221110 01157999999986
Q ss_pred ChhcHHHHhcCCCEEEEcccC
Q 013273 153 KRVQIEPALGNASVVICCIGA 173 (446)
Q Consensus 153 d~~~~~~a~~~~D~VI~~Ag~ 173 (446)
+-. .--+.+|.||..++.
T Consensus 152 ~~~---~~~~~fD~Iiv~~a~ 169 (223)
T d1r18a_ 152 KGY---PPNAPYNAIHVGAAA 169 (223)
T ss_dssp GCC---GGGCSEEEEEECSCB
T ss_pred ccc---ccccceeeEEEEeec
Confidence 421 113568999988775
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=81.00 E-value=1.2 Score=38.63 Aligned_cols=80 Identities=15% Similarity=0.055 Sum_probs=58.9
Q ss_pred CCCCEEEEEC-CCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhc
Q 013273 78 KDDNLAFVAG-ATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQ 156 (446)
Q Consensus 78 ~~~~~VlVtG-atG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~ 156 (446)
..+++||=.| |+|+.-.+|++..-.. .+|++++.++...+.+.+..+. .+++..+..|..+++.
T Consensus 72 ~pG~~VLDlGaGsG~~t~~la~~VG~~-G~V~aVD~s~~~l~~a~~~a~~--------------~~~~~~i~~d~~~~~~ 136 (227)
T d1g8aa_ 72 KPGKSVLYLGIASGTTASHVSDIVGWE-GKIFGIEFSPRVLRELVPIVEE--------------RRNIVPILGDATKPEE 136 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTT-SEEEEEESCHHHHHHHHHHHSS--------------CTTEEEEECCTTCGGG
T ss_pred CCCCEEEEeccCCCHHHHHHHHHhCCC-CEEEEEeCcHHHHHHHHHHHHh--------------cCCceEEEEECCCccc
Confidence 3566777776 4777777777754334 5999999999887776554322 2678899999999888
Q ss_pred HHHHhcCCCEEEEccc
Q 013273 157 IEPALGNASVVICCIG 172 (446)
Q Consensus 157 ~~~a~~~~D~VI~~Ag 172 (446)
+......+|+|++...
T Consensus 137 ~~~~~~~vD~i~~d~~ 152 (227)
T d1g8aa_ 137 YRALVPKVDVIFEDVA 152 (227)
T ss_dssp GTTTCCCEEEEEECCC
T ss_pred ccccccceEEEEEEcc
Confidence 8777788899988654
|
| >d1m6ia2 c.3.1.5 (A:264-400) Apoptosis-inducing factor (AIF) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Apoptosis-inducing factor (AIF) species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.81 E-value=0.83 Score=36.14 Aligned_cols=34 Identities=24% Similarity=0.166 Sum_probs=28.4
Q ss_pred CCEEEEECCCcHHHHHHHHHHHH----CCCeEEEEEcCc
Q 013273 80 DNLAFVAGATGKVGSRTVRELLK----LGFRVRAGVRSV 114 (446)
Q Consensus 80 ~~~VlVtGatG~IG~~lv~~L~~----~G~~V~~~~R~~ 114 (446)
.++++|.| .|++|..++..|.+ .|.+|+++.+.+
T Consensus 37 ~k~i~IvG-gG~~G~E~A~~l~~~~~~~g~~Vt~i~~~~ 74 (137)
T d1m6ia2 37 VKSITIIG-GGFLGSELACALGRKARALGTEVIQLFPEK 74 (137)
T ss_dssp CSEEEEEC-CSHHHHHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCEEEEEC-CCHHHHHHHHHHHHHHHhcCCEEEEecccc
Confidence 46899999 49999999998863 589999998865
|
| >d1rq2a1 c.32.1.1 (A:8-205) Cell-division protein FtsZ {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tubulin nucleotide-binding domain-like superfamily: Tubulin nucleotide-binding domain-like family: Tubulin, GTPase domain domain: Cell-division protein FtsZ species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=80.51 E-value=5.2 Score=33.65 Aligned_cols=95 Identities=18% Similarity=0.128 Sum_probs=60.8
Q ss_pred EEEEECCCcHHHHHHHHHHHHCCC---eEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEc---------
Q 013273 82 LAFVAGATGKVGSRTVRELLKLGF---RVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVEC--------- 149 (446)
Q Consensus 82 ~VlVtGatG~IG~~lv~~L~~~G~---~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~--------- 149 (446)
+|-|.| -|+-|..++..|.+.|. +.+++.-+...+.. . .....+..+
T Consensus 3 ~IkViG-vGGaG~n~vn~~~~~~~~~v~~iainTD~~~L~~-------~-------------~~~~ki~iG~~~t~G~Ga 61 (198)
T d1rq2a1 3 VIKVVG-IGGGGVNAVNRMIEQGLKGVEFIAINTDAQALLM-------S-------------DADVKLDVGRDSTRGLGA 61 (198)
T ss_dssp CEEEEE-EHHHHHHHHHHHHHTTCCSEEEEEEESCHHHHHH-------C-------------CCSEEEECCTTTC-----
T ss_pred eEEEEE-eCchHHHHHHHHHHcCCCCceEEEEcchHHHHhc-------C-------------CcchhhccccccccCCCc
Confidence 366778 68889999999999873 44555544332221 0 012222222
Q ss_pred --C--------CCChhcHHHHhcCCCEEEEcccCCCCccCCCCCcccchHHHHHHHHHHHHhCCCCEE
Q 013273 150 --D--------LEKRVQIEPALGNASVVICCIGASEKEVFDITGPYRIDFQATKNLVDAATIAKVNHF 207 (446)
Q Consensus 150 --D--------l~d~~~~~~a~~~~D~VI~~Ag~~~~~~~~~~~~~~vNv~g~~~l~~aa~~~~v~r~ 207 (446)
| ..+.+.+.+++++.|.||-.||....+ .--++-.+++.|++.++-.+
T Consensus 62 gg~p~~g~~aa~e~~~~I~~~l~~~d~vfi~AGlGGgT----------GtGaaPviA~iake~g~l~v 119 (198)
T d1rq2a1 62 GADPEVGRKAAEDAKDEIEELLRGADMVFVTAGEGGGT----------GTGGAPVVASIARKLGALTV 119 (198)
T ss_dssp CCCHHHHHHHHHHTHHHHHHHHTTCSEEEEEEETTSSH----------HHHHHHHHHHHHHHHTCEEE
T ss_pred CcChhhhHhhHHHHHHHHHHHhcCCCEEEEEEecCCCC----------CcchHHHHHHHHHHcCCcEE
Confidence 1 124567888889999999999976532 33456668889998886333
|
| >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Formyltransferase superfamily: Formyltransferase family: Formyltransferase domain: Methionyl-tRNAfmet formyltransferase species: Escherichia coli [TaxId: 562]
Probab=80.41 E-value=4.3 Score=34.09 Aligned_cols=33 Identities=24% Similarity=0.280 Sum_probs=27.8
Q ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEEc
Q 013273 79 DDNLAFVAGATGKVGSRTVRELLKLGFRVRAGVR 112 (446)
Q Consensus 79 ~~~~VlVtGatG~IG~~lv~~L~~~G~~V~~~~R 112 (446)
+.|+|+++| ++..+..+.+.|++.|++|.++.-
T Consensus 2 ~~mKI~f~G-~~~~~~~~L~~L~~~~~~i~~Vit 34 (206)
T d1fmta2 2 ESLRIIFAG-TPDFAARHLDALLSSGHNVVGVFT 34 (206)
T ss_dssp CCCEEEEEE-CSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCcEEEEEC-CCHHHHHHHHHHHhCCCCEEEEEe
Confidence 457899998 688999999999999999877653
|
| >d2igta1 c.66.1.51 (A:1-309) Putative methyltransferase Atu0340 {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Putative methyltransferase Atu0340 species: Agrobacterium tumefaciens [TaxId: 358]
Probab=80.32 E-value=2 Score=39.06 Aligned_cols=77 Identities=13% Similarity=-0.011 Sum_probs=49.4
Q ss_pred CCEEE-EECCCcHHHHHHHHHHHHCCCeEEEEEcCchhHHHHHHHHHHhhhcccccccCCCCCCceEEEEcCCCChhcHH
Q 013273 80 DNLAF-VAGATGKVGSRTVRELLKLGFRVRAGVRSVQRAENLVQSVKQMKLDGELANKGIQPVEMLELVECDLEKRVQIE 158 (446)
Q Consensus 80 ~~~Vl-VtGatG~IG~~lv~~L~~~G~~V~~~~R~~~~~~~l~~~~~~~~l~~~~~~~g~~~~~~v~~v~~Dl~d~~~~~ 158 (446)
+++|| ++.+||.++.++ ++.|.+|+.++.+........+-.+. -| ....+++++.+|+.+. ++
T Consensus 133 ~~rVLdlf~~tG~~sl~a----a~~GA~V~~VD~s~~al~~a~~N~~l---n~-------~~~~~~~~i~~D~~~~--l~ 196 (309)
T d2igta1 133 PLKVLNLFGYTGVASLVA----AAAGAEVTHVDASKKAIGWAKENQVL---AG-------LEQAPIRWICEDAMKF--IQ 196 (309)
T ss_dssp CCEEEEETCTTCHHHHHH----HHTTCEEEEECSCHHHHHHHHHHHHH---HT-------CTTSCEEEECSCHHHH--HH
T ss_pred CCeEEEecCCCcHHHHHH----HhCCCeEEEEeChHHHHHHHHHhhhh---hc-------ccCCcEEEEeCCHHHh--HH
Confidence 45665 556677666554 46799999999888777665543332 11 1124699999998642 33
Q ss_pred HHh---cCCCEEEEccc
Q 013273 159 PAL---GNASVVICCIG 172 (446)
Q Consensus 159 ~a~---~~~D~VI~~Ag 172 (446)
... ..+|+||..-.
T Consensus 197 ~~~~~~~~fD~IilDPP 213 (309)
T d2igta1 197 REERRGSTYDIILTDPP 213 (309)
T ss_dssp HHHHHTCCBSEEEECCC
T ss_pred HHhhcCCCCCEEEECCC
Confidence 332 56899998744
|