BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 013274
(446 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5BIM8|ERCC8_BOVIN DNA excision repair protein ERCC-8 OS=Bos taurus GN=ERCC8 PE=2 SV=1
Length = 397
Score = 225 bits (574), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 134/429 (31%), Positives = 204/429 (47%), Gaps = 68/429 (15%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL 60
M + R+AG P + R+ L+L+ +++ H +N+L ++ E RY+L
Sbjct: 1 MLGFLSARQAGLEDPLRLRRAESTRRVLGLELNKDRDVERIHCSGVNTLDIEPVEGRYML 60
Query: 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120
SG SD + +YD++ ++ ++V V + H HKY++ + WYP DTG+F
Sbjct: 61 SGGSDGVIVLYDLENSSRQP----YYTCKAVCSVGRSHPDVHKYSVETVQWYPHDTGMFT 116
Query: 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180
+ S+D +KVWDTN ++ F VY MSP+A H L+A GT +V+LCD+ SG
Sbjct: 117 SSSFDKTLKVWDTNTLQIADVFNFEETVYSHHMSPVATKHCLVAVGTRGPKVQLCDLKSG 176
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQLGRR 239
+ S L GHR I+ V WS E+IL T D + WD+RRA GC LDQ
Sbjct: 177 SCSHILQGHRQEILAVSWSPRYEYILATASADSRAKLWDVRRASGCLITLDQHNG----- 231
Query: 240 PPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGML 299
+K ++S + N V NG+ +S G
Sbjct: 232 -----KKSQAAESANTAHNGKV------------NGLCFTSDG----------------- 257
Query: 300 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359
++LL+ G+D+R+RLW+ +G NTLVN+ V + K +
Sbjct: 258 ----------------------LHLLTVGTDNRMRLWNSSNGENTLVNYGKVYNDSRKGL 295
Query: 360 QLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 417
+ + VFVP + + + I+SG+ +GHY+ V+CC F S QELY+G D
Sbjct: 296 KFTVSSGCSSEFVFVPYGSTIAVYTIYSGEQITMLKGHYKSVDCCVFQSNFQELYSGSRD 355
Query: 418 RQILVWCPS 426
IL W PS
Sbjct: 356 CNILAWVPS 364
>sp|Q8CFD5|ERCC8_MOUSE DNA excision repair protein ERCC-8 OS=Mus musculus GN=Ercc8 PE=2
SV=2
Length = 397
Score = 225 bits (574), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 140/448 (31%), Positives = 210/448 (46%), Gaps = 70/448 (15%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL 60
M + R++G P + R+ L+L+ +++ H +N+L ++ E RY+L
Sbjct: 1 MLSFLSARQSGLEDPLRLRRAQSTRRVLGLELNKDRDVERIHGSGVNTLDIEPVEGRYML 60
Query: 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120
SG SD V +YD++ A+ H ++V V + H HKY++ + WYP DTG+F
Sbjct: 61 SGGSDGVVVLYDLENASRQP---HYTC-KAVCSVGRSHPDVHKYSVETVQWYPHDTGMFT 116
Query: 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180
+ S+D +KVWDTN + F VY MSP A H L+A GT +V+LCD+ SG
Sbjct: 117 SSSFDKTLKVWDTNTLQAADVFNFEETVYSHHMSPAATKHCLVAVGTRGPKVQLCDLKSG 176
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQLGRR 239
+ S L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 177 SCSHILQGHRQEILAVSWSPRHDYILATASADSRVKLWDVRRASGCLLTLDQHNG----- 231
Query: 240 PPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGML 299
+K ++S + N V NG+ +S G
Sbjct: 232 -----KKSQAAESANTAHNGKV------------NGLCFTSDG----------------- 257
Query: 300 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359
++LL+ G+D+R+RLW+ SG NTLVN+ V + K +
Sbjct: 258 ----------------------LHLLTIGTDNRMRLWNSSSGDNTLVNYGKVCNDSRKGL 295
Query: 360 QLATT--QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 417
Q A + VFVP + + + + SG+ +GHY+ V+CC F QELY+G D
Sbjct: 296 QFAVSCGCSSEFVFVPHGSTIAVYAVHSGERLAMLKGHYKSVDCCVFQPNFQELYSGSRD 355
Query: 418 RQILVWCPSRH--ISDGVDAGPMQDQDN 443
IL W P + + D D P + Q N
Sbjct: 356 CNILAWVPPSYEPVPDDDDEAPAKSQLN 383
>sp|Q13216|ERCC8_HUMAN DNA excision repair protein ERCC-8 OS=Homo sapiens GN=ERCC8 PE=1
SV=1
Length = 396
Score = 220 bits (561), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 131/429 (30%), Positives = 201/429 (46%), Gaps = 68/429 (15%)
Query: 1 MWKEIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLL 60
M + R+ G P + R+ L+L+ +++ H G IN+L ++ E RY+L
Sbjct: 1 MLGFLSARQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYML 60
Query: 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120
SG SD + +YD++ ++ ++V + + H H+Y++ + WYP DTG+F
Sbjct: 61 SGGSDGVIVLYDLENSSRQS----YYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFT 116
Query: 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180
+ S+D +KVWDTN + F VY MSP++ H L+A GT +V+LCD+ SG
Sbjct: 117 SSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG 176
Query: 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQLGRR 239
+ S L GHR I+ V WS ++IL T D ++ WD+RRA GC LDQ
Sbjct: 177 SCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHN------ 230
Query: 240 PPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGML 299
G+ S A + NG+ +S G LH
Sbjct: 231 ----------------GKKSQAVESANTAHNGKVNGLCFTSDG-----------LH---- 259
Query: 300 SSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359
LL+ G+D+R+RLW+ +G NTLVN+ V + K +
Sbjct: 260 ------------------------LLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGL 295
Query: 360 QLATT--QDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 417
+ + VFVP + + + ++SG+ +GHY+ V+CC F S QELY+G D
Sbjct: 296 KFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355
Query: 418 RQILVWCPS 426
IL W PS
Sbjct: 356 CNILAWVPS 364
>sp|Q9USR0|CKN1_SCHPO DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ckn1 PE=1 SV=1
Length = 404
Score = 143 bits (361), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 122/229 (53%), Gaps = 10/229 (4%)
Query: 7 GREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHK----GSINSLQVDLTEERYLLSG 62
RE GQ +SF ++ HRL L L+ +I H GS+N+L +D T + ++SG
Sbjct: 7 AREWGQEPNSSFRRQLLQHRLQRLALNPDVKIKRRHGAGILGSVNALSIDNTIHQLMVSG 66
Query: 63 ASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG 122
++SS+ V+D+Q E I + HK+ I+ W+P D G+F +
Sbjct: 67 GANSSINVWDLQNIDQKEDEDLILDTLNAVPA----RTSHKFGITDLHWFPFDNGIFTSS 122
Query: 123 SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI 182
S+DH +KVWD + + F M +Y A SP+A SH LIA +RLCD+ SG+
Sbjct: 123 SFDHTLKVWDVSTLQEAYTFTMEDMIYSHAWSPIA-SHCLIATAYRSSSIRLCDMQSGSY 181
Query: 183 SQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-AGCFRVLD 230
+ +LSGH ++ V+W +E++L +G DG R WDIR+ + F +D
Sbjct: 182 THSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSSSFACMD 230
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 8/140 (5%)
Query: 294 LHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF-ETVR 352
LH L S +HYG V GL T D YL S G+D RIR+W++ESGRNTL F +
Sbjct: 231 LHNKYLPSNQTNISHYGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRNTLREFGPIIH 290
Query: 353 LQTSK------PIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGH-YEYVNCCCFS 405
QT+ IQ + D V+F ++ ++ G H + +NC +
Sbjct: 291 NQTTSFAVHPCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFVRRLSTHSLKRINCAAYR 350
Query: 406 SQDQELYTGGNDRQILVWCP 425
++ +TG + I +W P
Sbjct: 351 PDFEQCFTGDMNGNIYMWSP 370
Score = 35.4 bits (80), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 34/179 (18%), Positives = 73/179 (40%), Gaps = 12/179 (6%)
Query: 19 ANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATD 78
A R S RL +Q +Y +S H G++ ++ E L SG++D + ++D+++ +
Sbjct: 165 AYRSSSIRLCDMQSGSYTHSLSGHTGNVLAVDWCPKNEFVLASGSADGTCRLWDIRKVSS 224
Query: 79 YEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR- 137
+ + ++ Q H Y + + + D + D ++VW+ R
Sbjct: 225 SFACMDL---HNKYLPSNQTNISH-YGTVNGLAWTSDARYLASCGTDDRIRVWNMESGRN 280
Query: 138 -------VVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH 189
++ N V+ + P S + + +D + L ++ G+ + LS H
Sbjct: 281 TLREFGPIIHNQTTSFAVHPCMIQPSMDSDVFVLFPNDDGSLALLNLLEGSFVRRLSTH 339
>sp|Q8YRI1|YY46_NOSS1 Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp.
(strain PCC 7120 / UTEX 2576) GN=alr3466 PE=4 SV=1
Length = 1526
Score = 91.7 bits (226), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 134/332 (40%), Gaps = 59/332 (17%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH ++S + + D + +GS D V++WD + + + FK G R + +
Sbjct: 904 GHNSWVNS-VGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFK--GHTSRVRSVVFSPNS 960
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+++A+G+ D VRL DI+SG GH + +V ++ +L TG D +R WDI
Sbjct: 961 LMLASGSSDQTVRLWDISSGECLYIFQGHTGWVYSVAFNLDGS-MLATGSGDQTVRLWDI 1019
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280
+ CF + G S V+ V SS
Sbjct: 1020 SSSQCFYIFQ-------------------------GHTSCVR------------SVVFSS 1042
Query: 281 VGRIPAKGSVRQRLHPGMLSSQD---RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 337
G + A GS Q + +SS + H V + + DG L S G D +RLWD
Sbjct: 1043 DGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWD 1102
Query: 338 VESGRNTLVNFET----VRLQTSKP--IQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLT 391
+ SG N L + VR P + LA + V+ +DI S K T
Sbjct: 1103 ISSG-NCLYTLQGYTSWVRFLVFSPNGVTLANGSSDQI--------VRLWDISSKKCLYT 1153
Query: 392 FRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
+GH +VN FS L +G D+ + +W
Sbjct: 1154 LQGHTNWVNAVAFSPDGATLASGSGDQTVRLW 1185
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 103/383 (26%), Positives = 162/383 (42%), Gaps = 52/383 (13%)
Query: 59 LLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118
L SG+SD +V ++D I+ +++ Q G Y+++ + +D +
Sbjct: 963 LASGSSDQTVRLWD------------ISSGECLYIF--QGHTGWVYSVA----FNLDGSM 1004
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178
TGS D V++WD + ++ F+ R+ + ++ ++A+G++D VRL DI+
Sbjct: 1005 LATGSGDQTVRLWDISSSQCFYIFQGHTSCVRSVV--FSSDGAMLASGSDDQTVRLWDIS 1062
Query: 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGR 238
SG TL GH + +V +S +L +GG D +R WDI C L Q + R
Sbjct: 1063 SGNCLYTLQGHTSCVRSVVFSPDGA-MLASGGDDQIVRLWDISSGNCLYTL-QGYTSWVR 1120
Query: 239 RPPLLKRKVSISKSLS-----AGQNSSVKPRAPQKRSANG-NGVRQSSVGRIPAKGSVRQ 292
V+++ S SS K + N N V S G A GS Q
Sbjct: 1121 FLVFSPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQ 1180
Query: 293 RLHPGMLSSQD---RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE 349
+ +SS H V + DG L S SD +RLW++ S + L F
Sbjct: 1181 TVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSK-CLCTF- 1238
Query: 350 TVRLQTSKPIQLATTQDPAVVFVP--CMTA-------VKAFDIWSGKTCLTFRGHYEYVN 400
Q T+ +VVF P M A V+ +DI S K TF+GH +VN
Sbjct: 1239 ----------QGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVN 1288
Query: 401 CCCFSSQDQELYTGGNDRQILVW 423
F+ L +G D+ + +W
Sbjct: 1289 SVAFNPDGSMLASGSGDQTVRLW 1311
Score = 78.2 bits (191), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/367 (25%), Positives = 143/367 (38%), Gaps = 47/367 (12%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPL 156
GH + S ++ P D + +G D V++WD NC + + G
Sbjct: 1071 QGHTSCVRSVVFSP-DGAMLASGGDDQIVRLWDISSGNCL-----YTLQGYTSWVRFLVF 1124
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ + + +A G+ D VRL DI+S TL GH + + V +S L +G D +R
Sbjct: 1125 SPNGVTLANGSSDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGA-TLASGSGDQTVR 1183
Query: 217 FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ-------NSSVKPRAPQKR 269
WDI + C +L S + + S S S+ Q NSS Q
Sbjct: 1184 LWDISSSKCLYILQGHTSWVN--SVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGH 1241
Query: 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQD---RATAHYGAVTGLKVTEDGMYLLS 326
++ N V + G + A GS + + +SS H V + DG L S
Sbjct: 1242 TSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKCLHTFQGHTNWVNSVAFNPDGSMLAS 1301
Query: 327 AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT---------A 377
D +RLW++ S + L T Q T+ +V F P T
Sbjct: 1302 GSGDQTVRLWEISSSKC---------LHT---FQGHTSWVSSVTFSPDGTMLASGSDDQT 1349
Query: 378 VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVDAGP 437
V+ + I SG+ TF GH +V FS L +G D+ + +W IS G
Sbjct: 1350 VRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWS----ISSGKCLYT 1405
Query: 438 MQDQDNW 444
+Q +NW
Sbjct: 1406 LQGHNNW 1412
Score = 72.8 bits (177), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/378 (22%), Positives = 145/378 (38%), Gaps = 84/378 (22%)
Query: 59 LLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118
L SG+ D +V ++D I+ + ++++ GH ++S ++ P D
Sbjct: 1173 LASGSGDQTVRLWD------------ISSSKCLYIL-----QGHTSWVNSVVFNP-DGST 1214
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177
+GS D V++W+ N ++ + F+ V +P + ++A+G+ D VRL DI
Sbjct: 1215 LASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGS---MLASGSSDKTVRLWDI 1271
Query: 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG 237
+S T GH + + +V ++ +L +G D +R W+I + C
Sbjct: 1272 SSSKCLHTFQGHTNWVNSVAFNPDGS-MLASGSGDQTVRLWEISSSKCLHTFQ------- 1323
Query: 238 RRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPG 297
G S V + V S G + A GS Q +
Sbjct: 1324 ------------------GHTSWV------------SSVTFSPDGTMLASGSDDQTVRLW 1353
Query: 298 MLSSQD---RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354
+SS + H V + + DG L S D +RLW + SG+
Sbjct: 1354 SISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLWSISSGKCLYT-------- 1405
Query: 355 TSKPIQLATTQDPAVVFVPCMT---------AVKAFDIWSGKTCLTFRGHYEYVNCCCFS 405
+Q ++VF P T V+ ++I SG+ T GH V FS
Sbjct: 1406 ----LQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFS 1461
Query: 406 SQDQELYTGGNDRQILVW 423
S L +G +D I +W
Sbjct: 1462 SDGLILASGSDDETIKLW 1479
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 131/345 (37%), Gaps = 68/345 (19%)
Query: 112 YPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
+ D LF TG V+ W+ + ++ K G + ++A+G++D
Sbjct: 872 FSPDGKLFATGDSGGIVRFWEAATGKELLTCK--GHNSWVNSVGFSQDGKMLASGSDDQT 929
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231
VRL DI+SG +T GH + +V +S +S +L +G D +R WDI C +
Sbjct: 930 VRLWDISSGQCLKTFKGHTSRVRSVVFSPNS-LMLASGSSDQTVRLWDISSGECLYIF-- 986
Query: 232 SQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVR 291
Q G S++ +L G + A GS
Sbjct: 987 -QGHTGW-------VYSVAFNLD---------------------------GSMLATGSGD 1011
Query: 292 QRLHPGMLSSQD---RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF 348
Q + +SS H V + + DG L S D +RLWD+ SG N L
Sbjct: 1012 QTVRLWDISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSG-NCLYT- 1069
Query: 349 ETVRLQTSKPIQLATTQDPAVVFVP--CMTA-------VKAFDIWSGKTCLTFRGHYEYV 399
+Q T+ +VVF P M A V+ +DI SG T +G+ +V
Sbjct: 1070 ----------LQGHTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWV 1119
Query: 400 NCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVDAGPMQDQDNW 444
FS L G +D+ + +W IS +Q NW
Sbjct: 1120 RFLVFSPNGVTLANGSSDQIVRLW----DISSKKCLYTLQGHTNW 1160
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 138/328 (42%), Gaps = 36/328 (10%)
Query: 26 RLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHI 85
RL + S I+ H +NS+ + + L SG+SD +V ++++ +
Sbjct: 1183 RLWDISSSKCLYILQGHTSWVNSVVFN-PDGSTLASGSSDQTVRLWEINSS--------- 1232
Query: 86 AKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-M 144
K F GH ++S ++ P D + +GS D V++WD + ++ + F+
Sbjct: 1233 -KCLCTF-------QGHTSWVNSVVFNP-DGSMLASGSSDKTVRLWDISSSKCLHTFQGH 1283
Query: 145 PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEW 204
V A +P + ++A+G+ D VRL +I+S T GH + +V +S
Sbjct: 1284 TNWVNSVAFNPDGS---MLASGSGDQTVRLWEISSSKCLHTFQGHTSWVSSVTFSPDGT- 1339
Query: 205 ILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQN------ 258
+L +G D +R W I C + +G + +I S S Q
Sbjct: 1340 MLASGSDDQTVRLWSISSGECLYTFLGHTNWVG--SVIFSPDGAILASGSGDQTVRLWSI 1397
Query: 259 SSVKPRAPQKRSANGNG-VRQSSVGRIPAKGSVRQRLHPGMLSSQD---RATAHYGAVTG 314
SS K + N G + S G + A GS Q + +SS + H +V
Sbjct: 1398 SSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQTVRLWNISSGECLYTLHGHINSVRS 1457
Query: 315 LKVTEDGMYLLSAGSDSRIRLWDVESGR 342
+ + DG+ L S D I+LWDV++G
Sbjct: 1458 VAFSSDGLILASGSDDETIKLWDVKTGE 1485
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 4/129 (3%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + S I+ P D + +GS D V++W + + + + + G +
Sbjct: 1366 GHTNWVGSVIFSP-DGAILASGSGDQTVRLWSISSGKCL--YTLQGHNNWVGSIVFSPDG 1422
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L+A+G++D VRL +I+SG TL GH + + +V +S S IL +G D I+ WD+
Sbjct: 1423 TLLASGSDDQTVRLWNISSGECLYTLHGHINSVRSVAFS-SDGLILASGSDDETIKLWDV 1481
Query: 221 RRAGCFRVL 229
+ C + L
Sbjct: 1482 KTGECIKTL 1490
Score = 39.3 bits (90), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Query: 306 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ 365
T G+V + + DG + S +R W+ +G+ L T + S + +Q
Sbjct: 861 TKILGSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELL----TCKGHNSWVNSVGFSQ 916
Query: 366 DPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
D ++ V+ +DI SG+ TF+GH V FS L +G +D+ + +W
Sbjct: 917 DGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLW 975
>sp|O74855|NLE1_SCHPO Ribosome assembly protein C18.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC18.05c PE=3 SV=1
Length = 502
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 164/404 (40%), Gaps = 58/404 (14%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H G+I S Q + L++G+ D + ++D T IA + G
Sbjct: 133 HDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTP------IATMK-----------G 175
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS-- 159
H +S W P D + TGS D+ ++ WD + G R P+ A
Sbjct: 176 HTNWVSCVAWAP-DASIIATGSMDNTIRFWDPKKGSPI------GDALRRHTKPIMALCW 228
Query: 160 ---HM-------LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTG 209
H+ L+A+G++D VR+ ++ + TLSGH I V W WI +
Sbjct: 229 QPLHLAPDSGPYLLASGSKDNTVRIWNVKLRTLLFTLSGHTAPITCVRWG-GQNWIY-SS 286
Query: 210 GCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG--QNSSVKPRA-- 265
D IR WD + C +L +++ +S L +G ++ KP++
Sbjct: 287 SYDKTIRIWDAKDGKCLHILKGHAARVNHL------SLSTEHVLRSGAYDHTDFKPKSFS 340
Query: 266 PQKRSANGN---GVRQSSVGRIPAKGSVRQRLHPGMLSSQD--RATAHYGAVTGLKVTED 320
++R A ++QS + A ++ L S++ + H V + D
Sbjct: 341 DERRKAKERYEACLKQSGERLVSASDDLQLILWDPQKSTKPITKMHGHQKVVNHASFSPD 400
Query: 321 GMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVK 379
G + +A DS +RLWD ++G+ T+R + Q A + D ++ T +K
Sbjct: 401 GRCIATASFDSSVRLWDGKTGKF----LATLRGHVAAVYQCAWSTDSRLLVSSSQDTTLK 456
Query: 380 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
+D+ S K GH + V +S Q + +GG D+ + +W
Sbjct: 457 VWDVRSKKMKFDLPGHEDQVFAVDWSPDGQRVASGGADKAVRIW 500
>sp|P25382|NLE1_YEAST Ribosome assembly protein 4 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RSA4 PE=1 SV=3
Length = 515
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/388 (23%), Positives = 162/388 (41%), Gaps = 56/388 (14%)
Query: 59 LLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118
+++GA D++ ++D D + H K GH + W P D +
Sbjct: 159 MVTGAGDNTARIWDC----DTQTPMHTLK-------------GHYNWVLCVSWSP-DGEV 200
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMS--PL----AASHMLIAAGTEDVQV 172
TGS D+ +++WD + + + + T++S P+ S +A+ ++D +
Sbjct: 201 IATGSMDNTIRLWDPKSGQCLGDALRGHSKWITSLSWEPIHLVKPGSKPRLASSSKDGTI 260
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQ 231
++ D S T+SGH + + V+W + +L +G D +R WDI G C +L
Sbjct: 261 KIWDTVSRVCQYTMSGHTNSVSCVKWG--GQGLLYSGSHDRTVRVWDINSQGRCINILKS 318
Query: 232 SQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAP---QKRS---------ANGNGVRQS 279
+ L + + A ++ KP P QK++ NGN S
Sbjct: 319 HAHWVNH----LSLSTDYALRIGAFDHTGKKPSTPEEAQKKALENYEKICKKNGN----S 370
Query: 280 SVGRIPAKGSVRQRLHPGMLSSQD--RATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 337
+ A L + S++ R T H V + + DG Y++SA D+ I+LWD
Sbjct: 371 EEMMVTASDDYTMFLWNPLKSTKPIARMTGHQKLVNHVAFSPDGRYIVSASFDNSIKLWD 430
Query: 338 VESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFRGH 395
G+ T R + Q+A + D + V C T +K +D+ + K + GH
Sbjct: 431 GRDGK----FISTFRGHVASVYQVAWSSD-CRLLVSCSKDTTLKVWDVRTRKLSVDLPGH 485
Query: 396 YEYVNCCCFSSQDQELYTGGNDRQILVW 423
+ V +S + + +GG D+ + +W
Sbjct: 486 KDEVYTVDWSVDGKRVCSGGKDKMVRLW 513
Score = 32.7 bits (73), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/35 (37%), Positives = 19/35 (54%)
Query: 391 TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 425
T +GHY +V C +S + + TG D I +W P
Sbjct: 181 TLKGHYNWVLCVSWSPDGEVIATGSMDNTIRLWDP 215
>sp|Q00808|HETE1_PODAS Vegetative incompatibility protein HET-E-1 OS=Podospora anserina
GN=HET-E1 PE=4 SV=1
Length = 1356
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 154/397 (38%), Gaps = 47/397 (11%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H GS+ S+ ER + SG+ D ++ ++D T Q G
Sbjct: 882 HGGSVWSVAFSPDRER-VASGSDDKTIKIWDAASGTC-----------------TQTLEG 923
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASH 160
H + S + P D +GS DH +K+WD + G V A SP
Sbjct: 924 HGGRVQSVAFSP-DGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSP---DG 979
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+A+G+ D +++ D ASG +QTL GH + +V +S + + +G D I+ WD
Sbjct: 980 QRVASGSGDKTIKIWDTASGTCTQTLEGHGGSVWSVAFSPDGQRV-ASGSDDKTIKIWDT 1038
Query: 221 RRAGCFRVLDQSQS--QLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQ 278
C + L+ Q P +R S S + +V Q +G+ V
Sbjct: 1039 ASGTCTQTLEGHGGWVQSVVFSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWS 1098
Query: 279 ---SSVGRIPAKGSVRQRLHPGMLSSQDRATA--------HYGAVTGLKVTEDGMYLLSA 327
S G+ A GS+ G + D A+ H G V + + DG + S
Sbjct: 1099 VAFSPDGQRVASGSI-----DGTIKIWDAASGTCTQTLEGHGGWVHSVAFSPDGQRVASG 1153
Query: 328 GSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD-PAVVFVPCMTAVKAFDIWSG 386
D I++WD SG T +T+ +A + D V +K +D SG
Sbjct: 1154 SIDGTIKIWDAASGTCT----QTLEGHGGWVQSVAFSPDGQRVASGSSDKTIKIWDTASG 1209
Query: 387 KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
T GH +V FS Q + +G +D I +W
Sbjct: 1210 TCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIKIW 1246
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 150/386 (38%), Gaps = 67/386 (17%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H S+ S+ +R + SG+ D ++ ++D T Q G
Sbjct: 840 HGSSVLSVAFSADGQR-VASGSDDKTIKIWDTASGTG-----------------TQTLEG 881
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAA 158
H ++ S + P D +GS D +K+WD CT+ + G+V A SP
Sbjct: 882 HGGSVWSVAFSP-DRERVASGSDDKTIKIWDAASGTCTQTLEGHG--GRVQSVAFSP--- 935
Query: 159 SHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
+A+G++D +++ D ASG +QTL GH +++V +S + + +G D I+ W
Sbjct: 936 DGQRVASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRV-ASGSGDKTIKIW 994
Query: 219 DIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQ 278
D C + L+ G SV +R A+G+ +
Sbjct: 995 DTASGTCTQTLEG----------------------HGGSVWSVAFSPDGQRVASGSDDKT 1032
Query: 279 SSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 338
+ A G+ Q L H G V + + DG + S D I++WD
Sbjct: 1033 IKIWDT-ASGTCTQTLE-----------GHGGWVQSVVFSPDGQRVASGSDDHTIKIWDA 1080
Query: 339 ESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTA-VKAFDIWSGKTCLTFRGHYE 397
SG T +T+ +A + D V + +K +D SG T GH
Sbjct: 1081 VSGTCT----QTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGG 1136
Query: 398 YVNCCCFSSQDQELYTGGNDRQILVW 423
+V+ FS Q + +G D I +W
Sbjct: 1137 WVHSVAFSPDGQRVASGSIDGTIKIW 1162
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 10/137 (7%)
Query: 97 QHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAM 153
Q GH + S + P D +GS D +K+WD CT+ + G V A
Sbjct: 1129 QTLEGHGGWVHSVAFSP-DGQRVASGSIDGTIKIWDAASGTCTQTLEGHG--GWVQSVAF 1185
Query: 154 SPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
SP +A+G+ D +++ D ASG +QTL GH + +V +S + + +G D
Sbjct: 1186 SP---DGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRV-ASGSSDN 1241
Query: 214 AIRFWDIRRAGCFRVLD 230
I+ WD C + L+
Sbjct: 1242 TIKIWDTASGTCTQTLN 1258
>sp|B4JPT9|WDR12_DROGR Ribosome biogenesis protein WDR12 homolog OS=Drosophila grimshawi
GN=GH13339 PE=3 SV=1
Length = 419
Score = 76.3 bits (186), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 93/200 (46%), Gaps = 12/200 (6%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ S++S+ V +R+ +G+ D+ + ++ + EG AK V K G
Sbjct: 192 HERSVDSVAVSPDAQRFA-TGSWDTMLKLWSAELEDAVEGSAKRAKESGV-RTPKMTLQG 249
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+ +IS+ W +D +TGS+DH +KVWD N + ++ S L +
Sbjct: 250 HRESISAVQW--MDGTTLLTGSWDHTLKVWDLNLEGIKTEISTNKSIFDANFSKL---NR 304
Query: 162 LIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
LI + D +RL D + + T GH + TV WST+ E++ V+G D + W
Sbjct: 305 LIVTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 219 DIR--RAGCFRVLDQSQSQL 236
D R +A + +L + L
Sbjct: 365 DCRSPKAPLYDLLGHGEKVL 384
Score = 42.7 bits (99), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 84/205 (40%), Gaps = 35/205 (17%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVW----DTNCTRVVMNFKMPGK-VYRTAM 153
GH I + W +D G FV+ S D +W D+N V K + V A+
Sbjct: 142 GHTAPIKAVDWLSLDEVNGRFVSTSQDQTAMLWQWNIDSNAVDCVSVCKGHERSVDSVAV 201
Query: 154 SPLAASHMLIAAGTEDVQVRLC-----DIASGAISQ-----------TLSGHRDGIMTVE 197
SP A A G+ D ++L D G+ + TL GHR+ I V+
Sbjct: 202 SPDAQR---FATGSWDTMLKLWSAELEDAVEGSAKRAKESGVRTPKMTLQGHRESISAVQ 258
Query: 198 WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257
W + L+TG D ++ WD+ G + ++S L R + ++A
Sbjct: 259 WMDGT--TLLTGSWDHTLKVWDLNLEGIKTEISTNKSIFDANFSKLNRLI-----VTASA 311
Query: 258 NSSVKPRAPQKRSANGNGVRQSSVG 282
+ +++ P R+ G+ VR + +G
Sbjct: 312 DKNLRLYDP--RTNQGSVVRNTYLG 334
>sp|A7TNS8|CAF4_VANPO CCR4-associated factor 4 homolog OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=CAF4 PE=3 SV=1
Length = 669
Score = 75.5 bits (184), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 96/209 (45%), Gaps = 38/209 (18%)
Query: 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGG-----GHIAKHRSVFV 93
+ H +IN +Q+D T+++ ++SG DS V ++D+++ DY + + +F
Sbjct: 392 FNAHLSTINCMQLD-TQQQIIISGGRDSLVRLWDIKKFQDYSTNYNDIENYYEETNCIFE 450
Query: 94 VDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV----- 148
D H ISS + D +TGS D +K WD + V F + +
Sbjct: 451 CD-----SHSDEISSISY---DNFNLLTGSQDKTIKHWDLITGKCVQTFDVSFYLNNSPP 502
Query: 149 YRTAMSPLAASHML----------------IAAGTEDVQVRLCDIASGAISQTLSGHRDG 192
+ SP ++ +A+GT+D +RL D+ SG + + L GH D
Sbjct: 503 FENKFSPTKKNYFAHSEAPTIGSLQCFESALASGTKDGLIRLWDLRSGKVIRILEGHTDA 562
Query: 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
I ++++ ++ L+TG D IR WD+R
Sbjct: 563 ITSLKFDMTN---LITGSLDKNIRIWDMR 588
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 91/248 (36%), Gaps = 39/248 (15%)
Query: 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177
L+ G D+ +KVWD + ++ + +F + L +I +G D VRL DI
Sbjct: 368 LYSAGQLDNTIKVWDLSSSKFIGSFN--AHLSTINCMQLDTQQQIIISGGRDSLVRLWDI 425
Query: 178 ASGAISQT-----------------LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
T H D I ++ + + L+TG D I+ WD+
Sbjct: 426 KKFQDYSTNYNDIENYYEETNCIFECDSHSDEISSISYDN---FNLLTGSQDKTIKHWDL 482
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280
C + D S L PP + K+ A + SA +G +
Sbjct: 483 ITGKCVQTFDVS-FYLNNSPPFENKFSPTKKNYFAHSEAPTIGSLQCFESALASGTKDGL 541
Query: 281 VGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES 340
+ + R+ G H A+T LK D L++ D IR+WD+
Sbjct: 542 IRLWDLRSGKVIRILEG----------HTDAITSLKF--DMTNLITGSLDKNIRIWDM-- 587
Query: 341 GRN-TLVN 347
RN +LVN
Sbjct: 588 -RNWSLVN 594
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 376 TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
+K +D+ S K +F H +NC +Q Q + +GG D + +W
Sbjct: 376 NTIKVWDLSSSKFIGSFNAHLSTINCMQLDTQQQIIISGGRDSLVRLW 423
>sp|Q3Y8L7|WDR69_CHLRE Outer row dynein assembly protein 16 OS=Chlamydomonas reinhardtii
GN=ODA16 PE=1 SV=1
Length = 446
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 102/257 (39%), Gaps = 25/257 (9%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GHK + + + VTGS+D K+WD + + + + G
Sbjct: 134 GHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQ--LYYTLKGHQTEIVCLSFNPQS 191
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+IA G+ D +L D+ +G TL+GHR I+++ ++T + ++VTG D R WD+
Sbjct: 192 TIIATGSMDNTAKLWDVETGQERATLAGHRAEIVSLGFNTGGD-LIVTGSFDHDSRLWDV 250
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280
R C VL G R + + + + +L + R RS V+Q
Sbjct: 251 RTGQCVHVLS------GHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVKQGH 304
Query: 281 VGRI---------------PAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL 325
+ A GS R H Q H G ++ + G L+
Sbjct: 305 TDEVLDVAFDAAGTKMVSASADGSAR-LYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLI 363
Query: 326 SAGSDSRIRLWDVESGR 342
+A SD RLWD ++G
Sbjct: 364 TASSDKTCRLWDCDTGE 380
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 74/309 (23%), Positives = 115/309 (37%), Gaps = 47/309 (15%)
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGK---VYRTAMSPLAASHMLIAAGTEDVQVRLC 175
F+TGSYD KVW+T V F + G VY A + I G+ D +L
Sbjct: 109 FITGSYDRTCKVWNTFTGEEV--FTLEGHKNVVYAIAFNNPYGDK--IVTGSFDKTCKLW 164
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
D +G + TL GH+ I+ + ++ S I+ TG D + WD+
Sbjct: 165 DAYTGQLYYTLKGHQTEIVCLSFNPQST-IIATGSMDNTAKLWDVETGQ----------- 212
Query: 236 LGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLH 295
R L + I +S G N+ G+ + S VR
Sbjct: 213 --ERATLAGHRAEI---VSLGFNT------------GGDLIVTGSFDHDSRLWDVRTGQC 255
Query: 296 PGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 355
+LS H G V+ + G ++S D RLWDV SGR V + T
Sbjct: 256 VHVLS------GHRGEVSSTQFNYAGTLVVSGSIDCTSRLWDVRSGRCLSVK----QGHT 305
Query: 356 SKPIQLA-TTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTG 414
+ + +A +V + + + +G T GH ++ F+ Q L T
Sbjct: 306 DEVLDVAFDAAGTKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTRLITA 365
Query: 415 GNDRQILVW 423
+D+ +W
Sbjct: 366 SSDKTCRLW 374
Score = 38.5 bits (88), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 53/130 (40%), Gaps = 4/130 (3%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ +SS + T L V+GS D ++WD R ++ K G A+
Sbjct: 261 GHRGEVSSTQFNYAGT-LVVSGSIDCTSRLWDVRSGRC-LSVKQ-GHTDEVLDVAFDAAG 317
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+ + + D RL +G TL GH I V ++ L+T D R WD
Sbjct: 318 TKMVSASADGSARLYHTLTGVCQHTLVGHEGEISKVAFNPQGTR-LITASSDKTCRLWDC 376
Query: 221 RRAGCFRVLD 230
C +VL+
Sbjct: 377 DTGECLQVLE 386
Score = 35.8 bits (81), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 17/155 (10%)
Query: 280 SVGRIPAKGSVRQRLHPGMLSSQDRAT-------AHYGAVTGLKVTEDGMYLLSAGSDSR 332
S R PA + RL ML Q + AH +T + G ++ D
Sbjct: 58 SENRRPALRQLIHRLIDKMLEQQHHSFTLFKVLRAHILPLTNCAFNKSGDRFITGSYDRT 117
Query: 333 IRLWDVESGRNTLVNFETVRLQTSKPIQLATT-QDP---AVVFVPCMTAVKAFDIWSGKT 388
++W NT E L+ K + A +P +V K +D ++G+
Sbjct: 118 CKVW------NTFTGEEVFTLEGHKNVVYAIAFNNPYGDKIVTGSFDKTCKLWDAYTGQL 171
Query: 389 CLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
T +GH + C F+ Q + TG D +W
Sbjct: 172 YYTLKGHQTEIVCLSFNPQSTIIATGSMDNTAKLW 206
>sp|Q9C2I5|YTM1_NEUCR Ribosome biogenesis protein ytm1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ytm1 PE=3 SV=1
Length = 487
Score = 72.0 bits (175), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYE-------GGGHIAKHRSVFVV 94
H SI+SL+VD +R +L+ ++D S+ + +A+ E G H +K R +
Sbjct: 218 HTSSIDSLEVDGASKR-ILTASADGSIGFWTTSKASAPEVSDSSLLPGAHTSKRRKLATS 276
Query: 95 DKQHEHG-------HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK 147
+ G H ++A++ P D + + S DH VK D + VV F
Sbjct: 277 VTAAQRGPLALMNIHNAPATAAVFDPRDRTVAYSVSQDHTVKTIDLTTSSVVSTFTTSHA 336
Query: 148 VYRTAMSPLA-ASHMLIAAGTEDVQVRLCD--IASGAIS-QTLSGHRDGIMTVEWSTSSE 203
+ A P + AS L+A GT + L D ++ A S TL GH + ++++ + +E
Sbjct: 337 LLSLAALPRSSASAPLLACGTSARHITLVDPRTSTAATSVMTLRGHANKVVSLAANPENE 396
Query: 204 WILVTGGCDGAIRFWDIR 221
+ LV+G DG R WD+R
Sbjct: 397 YSLVSGSHDGTCRIWDLR 414
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 54/128 (42%), Gaps = 18/128 (14%)
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHML----IAAGTEDVQVRL 174
++ SYD +++WD + + + P + + + A+ L IA+ D VR+
Sbjct: 137 ILSASYDGLLRIWDASGNVIGTS---PSGSHGGHTASIKAAKFLSSTQIASAGMDRTVRV 193
Query: 175 CDIAS--------GAISQTLS--GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG 224
G + TL GH I ++E +S+ IL T DG+I FW +A
Sbjct: 194 WKYTESGESYERRGELKPTLELYGHTSSIDSLEVDGASKRIL-TASADGSIGFWTTSKAS 252
Query: 225 CFRVLDQS 232
V D S
Sbjct: 253 APEVSDSS 260
>sp|Q12021|RAD28_YEAST Radiation-sensitive protein 28 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RAD28 PE=4 SV=1
Length = 506
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 65/126 (51%), Gaps = 7/126 (5%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
HKY I++ WY D G+F TGS D VK+WDTN V + + K+ + + + S +
Sbjct: 194 HKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDINLGYKINQIDNNVVDDSSL 253
Query: 162 LIAAGTEDVQVRLCDI---ASGAISQTLSGH---RDGIMTVEWSTSSEWILVTGGCDGAI 215
L+ A +ED RL D+ SG + + + I+ +++ E I+ G +G +
Sbjct: 254 LVVA-SEDYYPRLIDLRTMNSGVTALGMGNQTRMQSEILCCKFNPVREQIIACGDMEGGV 312
Query: 216 RFWDIR 221
+ WD+R
Sbjct: 313 KLWDLR 318
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 116/274 (42%), Gaps = 36/274 (13%)
Query: 9 EAGQIRPNSFANRVKSHRLSTLQLSNY--KEIVSPHKGSINSLQVDLTEERYLLSGASDS 66
E +I + +N +K++R S + SNY KE +P +N L +D T + LL G D
Sbjct: 25 EFERILEDPLSN-MKNYRFS--KQSNYSTKE-KTPLSIGVNCLDIDDTGQ-VLLGGGDDG 79
Query: 67 SVAVYDVQRAT--DYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124
S++++ + + + EG + R ++ + H+ + A + G
Sbjct: 80 SLSIWGLDESLHRNDEGEQELINKRLNYIKRQPHQSDDEPAQ-------------IMGYK 126
Query: 125 DHYVKVWDTNCTRVVMNFKMPGKVYR-----TAMSPLAASHMLIAAGTEDVQVRLCDIAS 179
+ ++ D N R+V +F+ YR +A P+ SH+ + D + + S
Sbjct: 127 NKRTRINDNNTMRLVHSFQTQRNKYRMYRQSSAAVPVQRSHI---SNKTDSPIGFSETLS 183
Query: 180 GAISQ-TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGR 238
S+ ++S H+ GI T++W + + TG D ++ WD R + ++ LG
Sbjct: 184 ETDSEASISHHKYGITTLKWYKADNGMFFTGSNDKTVKIWDTNRFEAVQDIN-----LGY 238
Query: 239 RPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272
+ + V SL + PR R+ N
Sbjct: 239 KINQIDNNVVDDSSLLVVASEDYYPRLIDLRTMN 272
>sp|B2B5V0|YTM1_PODAN Ribosome biogenesis protein YTM1 OS=Podospora anserina (strain S /
ATCC MYA-4624 / DSM 980 / FGSC 10383) GN=YTM1 PE=3 SV=1
Length = 487
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 89/196 (45%), Gaps = 17/196 (8%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEG------GGHIAKHRSVFVVD 95
H+ S++SL+V +R +L+ ++D SVA++ +++ E H +K R V
Sbjct: 218 HRASVDSLEVHGPSKR-ILTASADGSVALWSASKSSSPEADASLLPNAHTSKRRKVASSV 276
Query: 96 KQHEHG-------HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV 148
+ G H ++A +YP D + + S DH VK D VV N + +
Sbjct: 277 TTPQRGPLFLMQIHNAPPTAAFFYPRDHTVGYSVSQDHTVKTLDLTTGSVVANLTLSHSL 336
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS---QTLSGHRDGIMTVEWSTSSEWI 205
P L+A GT + L D + A + TL GH + ++ + + +E+
Sbjct: 337 LSLCAIPRPNGAPLLAVGTSARHITLVDPRASAATTSVMTLRGHTNKVVALAANPENEYS 396
Query: 206 LVTGGCDGAIRFWDIR 221
LV+G DG R WD+R
Sbjct: 397 LVSGSHDGTCRIWDLR 412
>sp|B3MJV8|WDR12_DROAN Ribosome biogenesis protein WDR12 homolog OS=Drosophila ananassae
GN=GF14067 PE=3 SV=1
Length = 419
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + V+ + EG K
Sbjct: 180 SNTAECVSVCKGHERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELDDAGEGTSKRMKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D +TGS+DH +KVWD + + ++
Sbjct: 239 GVRT-PKMTLQGHRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + V WST+ E++
Sbjct: 296 DASYSNL---NRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQAVMWSTTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 38.9 bits (89), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 70/182 (38%), Gaps = 38/182 (20%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + S P D F TGS+D +KVW S
Sbjct: 191 GHERGVDSVSVSP-DGQRFATGSWDTMLKVW---------------------------SA 222
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L AG E R+ + TL GHR+ I V+W +S L+TG D ++ WD+
Sbjct: 223 ELDDAG-EGTSKRMKESGVRTPKMTLQGHRESISAVQWMDAS--TLLTGSWDHTLKVWDL 279
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280
G + ++S L R + + SA +N R R+ G+ VR +
Sbjct: 280 SLEGIKTEISTNKSIFDASYSNLNRLIVTA---SADKN----LRLYDARTNQGSVVRNTY 332
Query: 281 VG 282
+G
Sbjct: 333 LG 334
>sp|B4KKN1|WDR12_DROMO Ribosome biogenesis protein WDR12 homolog OS=Drosophila mojavensis
GN=GI17814 PE=3 SV=1
Length = 419
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + ++ + E AK
Sbjct: 180 SNAVECVSVCKGHERGVDSVCVSPDAQRFA-TGSWDTMLKIWSAELEDAGESTAKRAKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V + GH+ +IS+ W +D +TGS+DH +KVWD N + ++
Sbjct: 239 GV-RTPRMTLQGHRESISAVQW--MDNNTLLTGSWDHTLKVWDLNLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WS + E++
Sbjct: 296 DASHSKL---NNLIVTASADKNLRLYDARTNQGSVVRSTYLGHNAWVQTVMWSITEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 36.6 bits (83), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 58/268 (21%), Positives = 101/268 (37%), Gaps = 58/268 (21%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ + S P D F TGS+D +K+W S
Sbjct: 191 GHERGVDSVCVSP-DAQRFATGSWDTMLKIW---------------------------SA 222
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L AG E R + TL GHR+ I V+W ++ L+TG D ++ WD+
Sbjct: 223 ELEDAG-ESTAKRAKESGVRTPRMTLQGHRESISAVQWMDNN--TLLTGSWDHTLKVWDL 279
Query: 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280
G ++++ + S +L ++ R R+ G+ VR +
Sbjct: 280 NLEGI-------KTEISTNKSIFDASHSKLNNLIVTASADKNLRLYDARTNQGSVVRSTY 332
Query: 281 VGRIPAKGSVRQRLHP------GMLSSQD--------RATAHYGAVTGLKVTE----DGM 322
+G +V + G +Q+ +A + G KV + +
Sbjct: 333 LGHNAWVQTVMWSITEEFLFVSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVLDIDWSNPK 392
Query: 323 YLLSAGSDSRIRLWDVESGRNTLVNFET 350
Y++S G+D+ +R+ +S + T+ N ET
Sbjct: 393 YIVSGGADNTVRV--FKSSKATVENMET 418
>sp|B3N534|WDR12_DROER Ribosome biogenesis protein WDR12 homolog OS=Drosophila erecta
GN=GG10358 PE=3 SV=1
Length = 420
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 97/212 (45%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ ++ EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAEQEDAAEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GV-RTPKITLQGHRESVSAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 29/202 (14%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D TG FV+ S D +W N + K + + ++
Sbjct: 143 GHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSV 202
Query: 159 SH--MLIAAGTEDVQVRLC-----DIASGAISQ-----------TLSGHRDGIMTVEWST 200
S + A G+ D +++ D A G+ + TL GHR+ + V+W
Sbjct: 203 SPDGLRFATGSWDTMLKVWSAEQEDAAEGSSKRMKESGVRTPKITLQGHRESVSAVQWMD 262
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
+S L+TG D ++ WD+ G + ++S L R + L+A + +
Sbjct: 263 AS--TLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI-----LTASADKN 315
Query: 261 VKPRAPQKRSANGNGVRQSSVG 282
++ P R+ G+ VR + +G
Sbjct: 316 LRLYDP--RTNQGSVVRNTYLG 335
>sp|Q29KQ0|WDR12_DROPS Ribosome biogenesis protein WDR12 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA19813 PE=3 SV=1
Length = 419
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ ++S+ V +R+ +G+ D+ + V+ + EG K V K G
Sbjct: 192 HERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELEDAGEGTSKRMKESGV-RTPKITLQG 249
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+ +IS+ W +D +TGS+DH +KVWD + + ++ + S L +H+
Sbjct: 250 HRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKL--NHL 305
Query: 162 LIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
++ A + D +RL D + + T GH + TV WST+ E++ V+G D + W
Sbjct: 306 ILTA-SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 219 DIR--RAGCFRVLDQSQSQL 236
D R +A + +L + L
Sbjct: 365 DCRSPKAPLYDLLGHGEKVL 384
Score = 39.7 bits (91), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 29/202 (14%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D TG FV+ S D +W N + K + + ++
Sbjct: 142 GHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSV 201
Query: 159 SH--MLIAAGTEDVQVR-----LCDIASGAISQ-----------TLSGHRDGIMTVEWST 200
S A G+ D ++ L D G + TL GHR+ I V+W
Sbjct: 202 SPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWMD 261
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
+S L+TG D ++ WD+ G ++++ + S L ++
Sbjct: 262 AS--TLLTGSWDHTLKVWDLSLEGI-------KAEISTNKSIFDASYSKLNHLILTASAD 312
Query: 261 VKPRAPQKRSANGNGVRQSSVG 282
R R+ G+ VR + +G
Sbjct: 313 KNLRLYDSRTNQGSVVRNTYLG 334
>sp|B4GT01|WDR12_DROPE Ribosome biogenesis protein WDR12 homolog OS=Drosophila persimilis
GN=GL26386 PE=3 SV=1
Length = 419
Score = 69.3 bits (168), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/200 (26%), Positives = 95/200 (47%), Gaps = 12/200 (6%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ ++S+ V +R+ +G+ D+ + V+ + EG K V K G
Sbjct: 192 HERGVDSVSVSPDGQRFA-TGSWDTMLKVWSAELEDAGEGTSKRMKESGV-RTPKITLQG 249
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+ +IS+ W +D +TGS+DH +KVWD + + ++ + S L +H+
Sbjct: 250 HRESISAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKAEISTNKSIFDASYSKL--NHL 305
Query: 162 LIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
++ A + D +RL D + + T GH + TV WST+ E++ V+G D + W
Sbjct: 306 ILTA-SADKNLRLYDSRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGSYDNQNKLW 364
Query: 219 DIR--RAGCFRVLDQSQSQL 236
D R +A + +L + L
Sbjct: 365 DCRSPKAPLYDLLGHGEKVL 384
Score = 39.7 bits (91), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 45/202 (22%), Positives = 76/202 (37%), Gaps = 29/202 (14%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D TG FV+ S D +W N + K + + ++
Sbjct: 142 GHTAPIKAVDWISLDDDTGRFVSSSQDQTAMLWQWNVGANTVECVSVCKGHERGVDSVSV 201
Query: 159 SH--MLIAAGTEDVQVR-----LCDIASGAISQ-----------TLSGHRDGIMTVEWST 200
S A G+ D ++ L D G + TL GHR+ I V+W
Sbjct: 202 SPDGQRFATGSWDTMLKVWSAELEDAGEGTSKRMKESGVRTPKITLQGHRESISAVQWMD 261
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
+S L+TG D ++ WD+ G ++++ + S L ++
Sbjct: 262 AS--TLLTGSWDHTLKVWDLSLEGI-------KAEISTNKSIFDASYSKLNHLILTASAD 312
Query: 261 VKPRAPQKRSANGNGVRQSSVG 282
R R+ G+ VR + +G
Sbjct: 313 KNLRLYDSRTNQGSVVRNTYLG 334
>sp|Q6CJ50|MDV1_KLULA Mitochondrial division protein 1 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=MDV1 PE=3 SV=1
Length = 705
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 33/218 (15%)
Query: 25 HRLSTLQLSNYKEIVSPHK--GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGG 82
H + LS K+I + H SI+ +Q+D + L++G D+ + ++D+ +A E
Sbjct: 420 HSVKVWDLSKKKQIATLHGHLASISCMQID--QYSTLITGGRDAVLKLWDIDKAMADEAS 477
Query: 83 GHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN---CTRVV 139
+ + H + D V+GS D V+ WD N CT+ +
Sbjct: 478 NSSEDNDACLYTFDSH-------VDEITAISFDGDNLVSGSQDRTVRQWDLNSGKCTQTI 530
Query: 140 ------------MNFKMPGKVYRTAMSP----LAASHMLIAAGTEDVQVRLCDIASGAIS 183
N + V T P L +A GT+D VRL D+ SG +
Sbjct: 531 DISFATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVV 590
Query: 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
+ L GH D I ++++ + + LVTG D +IR WD+R
Sbjct: 591 RMLEGHTDAITSLQFDSVN---LVTGAMDRSIRIWDLR 625
Score = 52.0 bits (123), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 22/135 (16%)
Query: 307 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL---VNFET--VRLQTSKPIQ- 360
+H +T + DG L+S D +R WD+ SG+ T ++F T +R Q + P++
Sbjct: 492 SHVDEITAISF--DGDNLVSGSQDRTVRQWDLNSGKCTQTIDISFATGPMRSQRNIPLRN 549
Query: 361 --LATTQDPAVVFVPCMTA----------VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD 408
L T + PA+ + C A V+ +D+ SGK GH + + F S +
Sbjct: 550 SVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSGKVVRMLEGHTDAITSLQFDSVN 609
Query: 409 QELYTGGNDRQILVW 423
L TG DR I +W
Sbjct: 610 --LVTGAMDRSIRIW 622
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/232 (22%), Positives = 87/232 (37%), Gaps = 32/232 (13%)
Query: 122 GSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTE------DVQVRLC 175
GS DH VKVWD + + + + G + + + LI G + D+ +
Sbjct: 416 GSLDHSVKVWDLSKKKQIAT--LHGHLASISCMQIDQYSTLITGGRDAVLKLWDIDKAMA 473
Query: 176 DIASG------AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
D AS A T H D I + + + LV+G D +R WD+ C + +
Sbjct: 474 DEASNSSEDNDACLYTFDSHVDEITAISFDGDN---LVSGSQDRTVRQWDLNSGKCTQTI 530
Query: 230 DQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGS 289
D S P +R + + S+ + +A G + V +
Sbjct: 531 DIS---FATGPMRSQRNIPLRNSVLLTKEPPAIGALQCFDAALATGTKDGIVRLWDLRSG 587
Query: 290 VRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341
R+ G H A+T L+ D + L++ D IR+WD+ +G
Sbjct: 588 KVVRMLEG----------HTDAITSLQF--DSVNLVTGAMDRSIRIWDLRTG 627
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
+ +AG+ D V++ D++ TL GH I ++ S L+TGG D ++ WDI
Sbjct: 412 MCSAGSLDHSVKVWDLSKKKQIATLHGHLASISCMQIDQYS--TLITGGRDAVLKLWDID 469
Query: 222 RA 223
+A
Sbjct: 470 KA 471
>sp|Q6FXI8|HAT2_CANGA Histone acetyltransferase type B subunit 2 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=HAT2 PE=3 SV=1
Length = 419
Score = 68.9 bits (167), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 96/195 (49%), Gaps = 21/195 (10%)
Query: 49 LQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISS 108
L + E+ LLSG+ DS++A++D+ +++E K F E H I+
Sbjct: 185 LAFNANEKYSLLSGSDDSNIALWDI---SNFEKN---IKPTITF------EDAHTDIIND 232
Query: 109 AIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTE 168
W+ + +F + S D +K++D ++++ N A SP + S++ AAGT+
Sbjct: 233 VKWHSSEAHIFGSVSEDSTMKLFDKRSSQIIHNINTKKPYNTLAFSPFS-SNLFAAAGTD 291
Query: 169 DVQVRLCDI--ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF 226
++ V L DI S + ++GH D + +E+ +++ IL + G D WD++ G
Sbjct: 292 NL-VYLYDIRDVSNPL-YAMTGHEDAVTAIEFDPNNDGILYSSGSDRRTIVWDLQEIGA- 348
Query: 227 RVLDQSQSQLGRRPP 241
+Q+Q ++ PP
Sbjct: 349 ---EQTQDEIEDGPP 360
>sp|B4P116|WDR12_DROYA Ribosome biogenesis protein WDR12 homolog OS=Drosophila yakuba
GN=GE13328 PE=2 SV=1
Length = 420
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAEVEDAVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDASTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D TG FV+ S D +W N + K + + ++
Sbjct: 143 GHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSV 202
Query: 159 SH--MLIAAGTEDVQVRLC-----DIASGAISQ-----------TLSGHRDGIMTVEWST 200
S + A G+ D +++ D G+ + TL GHR+ + V+W
Sbjct: 203 SPDGLRFATGSWDTMLKVWSAEVEDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMD 262
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
+S L+TG D ++ WD+ G + ++S L R + L+A + +
Sbjct: 263 AS--TLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI-----LTASADKN 315
Query: 261 VKPRAPQKRSANGNGVRQSSVG 282
++ P R+ G+ VR + +G
Sbjct: 316 LRLYDP--RTNQGSVVRNTYLG 335
>sp|A5DB75|SEC31_PICGU Protein transport protein SEC31 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=SEC31 PE=3 SV=2
Length = 1266
Score = 68.9 bits (167), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 44/182 (24%), Positives = 83/182 (45%), Gaps = 16/182 (8%)
Query: 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE 99
S H G + +LQ + +E LLSG S+ + V+D ++ +D +A +++ +D+
Sbjct: 114 SAHSGPVKTLQFNPLQEHVLLSGGSNGQIFVWDTKKLSD-----PVAPGKAMTPMDE--- 165
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
IS W + +F T Y +WD R V++ A P ++
Sbjct: 166 ------ISCVSWNNSVSHIFATTGNSGYTSIWDLKSKREVLHLSYSANFSCVAWHPTQST 219
Query: 160 HMLIAAGTE-DVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
++ A G + D + D+ + A + + GH+ GI++++W IL++ G D A
Sbjct: 220 KLVTATGNDSDALILTWDLKNANAPEKIMRGHKKGILSLDWCKQDPEILISSGKDNATML 279
Query: 218 WD 219
W+
Sbjct: 280 WN 281
Score = 35.4 bits (80), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 50/109 (45%), Gaps = 14/109 (12%)
Query: 128 VKVWD----TNCTRVVMNFKMPGKVYRTAMSPLAA--SHMLIAAGTEDVQVRLCDIASGA 181
+++WD TN + + + + Y A S + S ++A E+ + L D+
Sbjct: 41 LEIWDIFSATNSKDPIFSASVDNRFYAIAWSKPSEGRSKGVLAGAFENGTIELWDVQELI 100
Query: 182 ISQTL--------SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
S+ L S H + T++++ E +L++GG +G I WD ++
Sbjct: 101 TSKDLQKASIFKSSAHSGPVKTLQFNPLQEHVLLSGGSNGQIFVWDTKK 149
>sp|B4LS78|WDR12_DROVI Ribosome biogenesis protein WDR12 homolog OS=Drosophila virilis
GN=GJ17641 PE=3 SV=1
Length = 419
Score = 68.6 bits (166), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 94/212 (44%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V +R+ +G+ D+ + ++ EG K
Sbjct: 180 SNAVECVSVCKGHERGVDSVCVSPDAQRFA-TGSWDTMLKIWSAGLDDTSEGTAKRVKES 238
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ +IS+ W +D VTGS+DH +KVWD + ++
Sbjct: 239 GVRT-PKMTLQGHRESISAVQW--MDATTLVTGSWDHTLKVWDLQLEGIKTEISTNKSIF 295
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WS + E++
Sbjct: 296 DASYSKL---NRLIVTASADKNLRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLF 352
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 353 VSGSYDTQNKLWDCRSPKAPLYDLLGHGEKVL 384
Score = 43.5 bits (101), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 114/288 (39%), Gaps = 49/288 (17%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D G FV+ S D +W N + K + + +
Sbjct: 142 GHTAPIKAVDWISMDDENGRFVSTSQDQTAMLWQWNIASNAVECVSVCKGHERGVDSVCV 201
Query: 159 S--HMLIAAGTEDVQVR-----LCDIASGAISQ-----------TLSGHRDGIMTVEWST 200
S A G+ D ++ L D + G + TL GHR+ I V+W
Sbjct: 202 SPDAQRFATGSWDTMLKIWSAGLDDTSEGTAKRVKESGVRTPKMTLQGHRESISAVQWMD 261
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
++ LVTG D ++ WD++ G + ++S L R + + SA +N
Sbjct: 262 AT--TLVTGSWDHTLKVWDLQLEGIKTEISTNKSIFDASYSKLNRLIVTA---SADKN-- 314
Query: 261 VKPRAPQKRSANGNGVRQSSVGR------IPAKGSVRQRLHPGMLSSQD--------RAT 306
R R+ G+ VR + +G + + G +Q+ +A
Sbjct: 315 --LRLYDARTNQGSVVRNTYLGHNAWVQTVMWSNTEEFLFVSGSYDTQNKLWDCRSPKAP 372
Query: 307 AHYGAVTGLKVTE----DGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350
+ G KV + + Y++S G+D+ +R++ +SG+ T+ N ET
Sbjct: 373 LYDLLGHGEKVLDIDWSNPKYIVSGGADNTVRVF--KSGKATIENMET 418
>sp|Q9VKQ3|WDR12_DROME Ribosome biogenesis protein WDR12 homolog OS=Drosophila
melanogaster GN=CG6724 PE=2 SV=1
Length = 420
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 96/212 (45%), Gaps = 15/212 (7%)
Query: 33 SNYKEIVSPHKG---SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHR 89
SN E VS KG ++S+ V R+ +G+ D+ + V+ + EG K
Sbjct: 181 SNSVECVSVCKGHERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDAVEGSSKRMKES 239
Query: 90 SVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY 149
V K GH+ ++S+ W +D +TGS+DH +KVWD + + ++
Sbjct: 240 GVRT-PKITLQGHRESVSAVQW--MDATTLLTGSWDHTLKVWDLSLEGIKTEISTNKSIF 296
Query: 150 RTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWIL 206
+ S L + LI + D +RL D + + T GH + TV WST+ E++
Sbjct: 297 DASYSKL---NRLILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLF 353
Query: 207 VTGGCDGAIRFWDIR--RAGCFRVLDQSQSQL 236
V+G D + WD R +A + +L + L
Sbjct: 354 VSGAYDNQNKLWDCRSPKAPLYDLLGHGEKVL 385
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 83/202 (41%), Gaps = 29/202 (14%)
Query: 101 GHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH I + W +D TG FV+ S D +W N + K + + ++
Sbjct: 143 GHTAPIKAVDWISLDEETGRFVSTSQDQTAMLWQWNVGSNSVECVSVCKGHERGVDSVSV 202
Query: 159 SH--MLIAAGTEDVQVR-----LCDIASGAISQ-----------TLSGHRDGIMTVEWST 200
S + A G+ D ++ L D G+ + TL GHR+ + V+W
Sbjct: 203 SPDGLRFATGSWDTMLKVWSAELDDAVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMD 262
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
++ L+TG D ++ WD+ G + ++S L R + L+A + +
Sbjct: 263 AT--TLLTGSWDHTLKVWDLSLEGIKTEISTNKSIFDASYSKLNRLI-----LTASADKN 315
Query: 261 VKPRAPQKRSANGNGVRQSSVG 282
++ P R+ G+ VR + +G
Sbjct: 316 LRLYDP--RTNQGSVVRNTYLG 335
>sp|Q758R7|MDV1_ASHGO Mitochondrial division protein 1 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=MDV1
PE=3 SV=1
Length = 715
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 95/201 (47%), Gaps = 33/201 (16%)
Query: 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQH 98
++ H +++ +Q+D + L++G D+ + ++D+Q+A D + + ++ D
Sbjct: 450 ITGHLATVSCMQMD--QYNTLITGGRDALLKMWDIQKAIDNDSIP--SDEVCIYTFDSH- 504
Query: 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV----MNFKMPGKVYRTAMS 154
I + V+GS D ++ WD N + V +NF G + R+ +
Sbjct: 505 -------IDEITALSFEANNLVSGSQDRTIRQWDLNNGKCVQTLDINFATGGNLSRSMIG 557
Query: 155 ----------PLAAS----HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWST 200
P+ + +A GT+D VRL D+ SG + +TL GH D + ++++ +
Sbjct: 558 SGFLNTNNDHPIIGAIQCYDAALATGTKDGIVRLWDLRSGRVVRTLEGHSDAVTSLQFDS 617
Query: 201 SSEWILVTGGCDGAIRFWDIR 221
+ LVTG D +IR WD+R
Sbjct: 618 LN---LVTGSLDNSIRIWDLR 635
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 57/134 (42%), Gaps = 21/134 (15%)
Query: 307 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTL-VNFETVRLQTSKPIQ--- 360
+H +T L + L+S D IR WD+ +G+ TL +NF T + I
Sbjct: 503 SHIDEITALSFEANN--LVSGSQDRTIRQWDLNNGKCVQTLDINFATGGNLSRSMIGSGF 560
Query: 361 LATTQD-PAVVFVPCMTA----------VKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ 409
L T D P + + C A V+ +D+ SG+ T GH + V F S +
Sbjct: 561 LNTNNDHPIIGAIQCYDAALATGTKDGIVRLWDLRSGRVVRTLEGHSDAVTSLQFDSLN- 619
Query: 410 ELYTGGNDRQILVW 423
L TG D I +W
Sbjct: 620 -LVTGSLDNSIRIW 632
Score = 38.5 bits (88), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 89/230 (38%), Gaps = 32/230 (13%)
Query: 122 GSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181
G D +KVW+ + + V + + G + + + + LI G D +++ DI
Sbjct: 430 GKLDPTIKVWNLSKNKHVAS--ITGHLATVSCMQMDQYNTLITGG-RDALLKMWDIQKAI 486
Query: 182 ISQ----------TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231
+ T H D I + + ++ LV+G D IR WD+ C + LD
Sbjct: 487 DNDSIPSDEVCIYTFDSHIDEITALSFEANN---LVSGSQDRTIRQWDLNNGKCVQTLDI 543
Query: 232 SQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVR 291
+ + G L R + S L+ + + +A G + V +
Sbjct: 544 NFATGGN----LSRSMIGSGFLNTNNDHPIIGAIQCYDAALATGTKDGIVRLWDLRSGRV 599
Query: 292 QRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341
R G H AVT L+ D + L++ D+ IR+WD+ +G
Sbjct: 600 VRTLEG----------HSDAVTSLQF--DSLNLVTGSLDNSIRIWDLRTG 637
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD repeat-containing protein 11 OS=Homo sapiens GN=FBXW11
PE=1 SV=1
Length = 542
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK 96
++++ H GS+ LQ D ER +++G+SDS+V V+DV H
Sbjct: 274 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIH------------ 318
Query: 97 QHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSP 155
H A+ + GL VT S D + VWD + T + + + G +R A++
Sbjct: 319 -----HNEAV---LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNV 368
Query: 156 LAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+ I + + D +++ ++ +TL+GH+ GI +++ ++V+G D I
Sbjct: 369 VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTI 425
Query: 216 RFWDIRRAGCFRVLD 230
R WDI C RVL+
Sbjct: 426 RLWDIECGACLRVLE 440
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 49/263 (18%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
I +G D +++ D S + L+GH ++ +++ E ++VTG D +R WD+
Sbjct: 253 IISGLRDNSIKIWDKTSLECLKVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNT 309
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282
L + +L + S ++ ++ S+ SA +R+ VG
Sbjct: 310 GEVLNTL------IHHNEAVLHLRFSNGLMVTCSKDRSIA--VWDMASATDITLRRVLVG 361
Query: 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 342
H AV V D Y++SA D I++W +
Sbjct: 362 -------------------------HRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTC- 393
Query: 343 NTLVNFETVRLQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVN 400
E VR +A Q D VV ++ +DI G GH E V
Sbjct: 394 ------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 447
Query: 401 CCCFSSQDQELYTGGNDRQILVW 423
C F ++ + +G D +I VW
Sbjct: 448 CIRF--DNKRIVSGAYDGKIKVW 468
Score = 39.3 bits (90), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 306 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLV--NFETVRLQTSKPIQL 361
T H G+V L+ D +++ SDS +R+WDV +G NTL+ N + L+ S + +
Sbjct: 277 TGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMV 334
Query: 362 ATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR----GHYEYVNCCCFSSQDQELYTGGND 417
++D ++ +D+ S T +T R GH VN F D+ + + D
Sbjct: 335 TCSKD---------RSIAVWDMASA-TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 382
Query: 418 RQILVWCPS 426
R I VW S
Sbjct: 383 RTIKVWSTS 391
>sp|Q5SRY7|FBW1B_MOUSE F-box/WD repeat-containing protein 11 OS=Mus musculus GN=Fbxw11
PE=1 SV=1
Length = 542
Score = 68.2 bits (165), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 91/195 (46%), Gaps = 29/195 (14%)
Query: 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK 96
++++ H GS+ LQ D ER +++G+SDS+V V+DV H
Sbjct: 274 KVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNTGEVLNTLIH------------ 318
Query: 97 QHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD-TNCTRVVMNFKMPGKVYRTAMSP 155
H A+ + GL VT S D + VWD + T + + + G +R A++
Sbjct: 319 -----HNEAV---LHLRFSNGLMVTCSKDRSIAVWDMASATDITLRRVLVG--HRAAVNV 368
Query: 156 LAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+ I + + D +++ ++ +TL+GH+ GI +++ ++V+G D I
Sbjct: 369 VDFDDKYIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR---LVVSGSSDNTI 425
Query: 216 RFWDIRRAGCFRVLD 230
R WDI C RVL+
Sbjct: 426 RLWDIECGACLRVLE 440
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 49/263 (18%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
I +G D +++ D +S + L+GH ++ +++ E ++VTG D +R WD+
Sbjct: 253 IISGLRDNSIKIWDKSSLECLKVLTGHTGSVLCLQYD---ERVIVTGSSDSTVRVWDVNT 309
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282
L + +L + S ++ ++ S+ SA +R+ VG
Sbjct: 310 GEVLNTL------IHHNEAVLHLRFSNGLMVTCSKDRSIA--VWDMASATDITLRRVLVG 361
Query: 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 342
H AV V D Y++SA D I++W +
Sbjct: 362 -------------------------HRAAVN--VVDFDDKYIVSASGDRTIKVWSTSTC- 393
Query: 343 NTLVNFETVRLQTSKPIQLATTQ--DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVN 400
E VR +A Q D VV ++ +DI G GH E V
Sbjct: 394 ------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 447
Query: 401 CCCFSSQDQELYTGGNDRQILVW 423
C F ++ + +G D +I VW
Sbjct: 448 CIRF--DNKRIVSGAYDGKIKVW 468
Score = 40.4 bits (93), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 53/112 (47%), Gaps = 13/112 (11%)
Query: 115 DTGLFVTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D ++G D+ +K+WD + C +V+ + ++ L +I G+ D
Sbjct: 249 DDDKIISGLRDNSIKIWDKSSLECLKVLTG-------HTGSVLCLQYDERVIVTGSSDST 301
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
VR+ D+ +G + TL H + ++ + +S ++VT D +I WD+ A
Sbjct: 302 VRVWDVNTGEVLNTLIHHNEAVLHLRFSNG---LMVTCSKDRSIAVWDMASA 350
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 306 TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR--NTLV--NFETVRLQTSKPIQL 361
T H G+V L+ D +++ SDS +R+WDV +G NTL+ N + L+ S + +
Sbjct: 277 TGHTGSVLCLQY--DERVIVTGSSDSTVRVWDVNTGEVLNTLIHHNEAVLHLRFSNGLMV 334
Query: 362 ATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR----GHYEYVNCCCFSSQDQELYTGGND 417
++D ++ +D+ S T +T R GH VN F D+ + + D
Sbjct: 335 TCSKD---------RSIAVWDMASA-TDITLRRVLVGHRAAVNVVDF--DDKYIVSASGD 382
Query: 418 RQILVWCPS 426
R I VW S
Sbjct: 383 RTIKVWSTS 391
>sp|A6ZZZ8|CAF4_YEAS7 CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain
YJM789) GN=CAF4 PE=3 SV=2
Length = 645
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK--QHE 99
H ++N +Q+D L++G+ D+++ ++D+ + + K ++ +V +
Sbjct: 363 HLATVNCMQIDKKNYNMLITGSKDATLKLWDLNLSRELYLDHSPLKEKTEEIVTPCIHNF 422
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVM-----------NFKMPGKV 148
HK I++ + D+ V+GS D + WD + + + KMP +
Sbjct: 423 ELHKDEITALSF---DSEALVSGSRDKKIFHWDLTTGKCIQQLDLIFTPTHSDIKMPARS 479
Query: 149 YRTAMSPLAASHMLI----------AAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEW 198
L +I A GT+D VRL D+ G + L GH DGI ++++
Sbjct: 480 LNNGTCLLGTEAPMIGALQCYNSALATGTKDGLVRLWDLRVGKPVRLLEGHTDGITSLKF 539
Query: 199 STSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ LVTG D ++R WD+R + V+
Sbjct: 540 DSEK---LVTGSMDNSVRIWDLRTSSILDVI 567
Score = 36.2 bits (82), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 44/114 (38%), Gaps = 28/114 (24%)
Query: 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176
+ +TGS D +K+WD N +R L H + TE++ V C
Sbjct: 378 NMLITGSKDATLKLWDLNLSR-----------------ELYLDHSPLKEKTEEI-VTPC- 418
Query: 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230
H+D I + + + + LV+G D I WD+ C + LD
Sbjct: 419 ------IHNFELHKDEITALSFDSEA---LVSGSRDKKIFHWDLTTGKCIQQLD 463
>sp|Q6BU94|PRP46_DEBHA Pre-mRNA-splicing factor PRP46 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PRP46 PE=3 SV=2
Length = 417
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 102/227 (44%), Gaps = 41/227 (18%)
Query: 4 EIGGREAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGA 63
E+G ++ +IRP+S +R K R+ + H+G + S VD ++ ++G+
Sbjct: 93 EVGSKQVSEIRPDS-DSRWKLLRV----------MAGAHQGWVRSCTVDPVTNKWFVTGS 141
Query: 64 SDSSVAVYDVQRAT-DYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG 122
SDS++ ++D+ + GHI RS+ A+SS YP +G
Sbjct: 142 SDSTIKIWDLASSNLKATITGHIMGVRSL-------------AVSSR--YP----YLFSG 182
Query: 123 SYDHYVKVWDTNCTRV-----VMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176
S D VK WD T + N+ G +Y A+ P L+ G D +R+ D
Sbjct: 183 SEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELD---LLFTGGRDSVIRVWD 239
Query: 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223
+ S LSGHR I ++ S + ++T D IR WDIR+A
Sbjct: 240 LRSRTEIMVLSGHRSDITSIA-SQIGDPQIITSSMDATIRLWDIRKA 285
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 64/299 (21%), Positives = 118/299 (39%), Gaps = 18/299 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H+ + S PV FVTGS D +K+WD + + + G + +++ +
Sbjct: 119 AHQGWVRSCTVDPVTNKWFVTGSSDSTIKIWDLASSN--LKATITGHIMGVRSLAVSSRY 176
Query: 161 MLIAAGTEDVQVRLCDI-----ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+ +G+ED V+ D+ +SG + GH GI + + +L TGG D I
Sbjct: 177 PYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHGHVGGIYAMALHPELD-LLFTGGRDSVI 235
Query: 216 RFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275
R WD+R VL +S + + I+ S+ A +A + + +
Sbjct: 236 RVWDLRSRTEIMVLSGHRSDITSIASQIGDPQIITSSMDATIRLWDIRKATTQLALTHHS 295
Query: 276 VRQSSVGRIPAK---------GSVRQRLHP-GMLSSQDRATAHYGAVTGLKVTEDGMYLL 325
S+ P + G++++ L P G L ++ + + L + L
Sbjct: 296 KSIRSMAMHPQEMTMCSGDTSGNLKEWLLPGGELLNEFGHSGENKIINTLSINPSNNTLF 355
Query: 326 SAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIW 384
S D R+ +D SG + T +++ A+T D + + + K+ IW
Sbjct: 356 SGYDDGRMEFYDYVSGDLLQSDATTPVTGSTESAIYASTFDMSGLRLITCEGDKSIKIW 414
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 43/224 (19%), Positives = 82/224 (36%), Gaps = 35/224 (15%)
Query: 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260
+++W VTG D I+ WD+ + K +I+ + ++ +
Sbjct: 133 TNKW-FVTGSSDSTIKIWDLASSNL--------------------KATITGHIMGVRSLA 171
Query: 261 VKPRAPQKRSANGNG-VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE 319
V R P S + + V+ + R + + R + G H G + + +
Sbjct: 172 VSSRYPYLFSGSEDKTVKCWDLERTNSSSGCQIRNYHG----------HVGGIYAMALHP 221
Query: 320 DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVK 379
+ L + G DS IR+WD+ S +V TS Q+ DP ++ ++
Sbjct: 222 ELDLLFTGGRDSVIRVWDLRSRTEIMVLSGHRSDITSIASQIG---DPQIITSSMDATIR 278
Query: 380 AFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
+DI T L H + + Q+ + +G + W
Sbjct: 279 LWDIRKATTQLALTHHSKSIRSMAMHPQEMTMCSGDTSGNLKEW 322
>sp|P36130|CAF4_YEAST CCR4-associated factor 4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=CAF4 PE=1 SV=3
Length = 643
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 93/211 (44%), Gaps = 29/211 (13%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK--QHE 99
H ++N +Q+D L++G+ D+++ ++D+ + + K ++ +V +
Sbjct: 361 HLATVNCMQIDKKNYNMLITGSKDATLKLWDLNLSREIYLDHSPLKEKTEEIVTPCIHNF 420
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVM-----------NFKMPGKV 148
HK I++ + D+ V+GS D + WD + + + KMP +
Sbjct: 421 ELHKDEITALSF---DSEALVSGSRDKKIFHWDLTTGKCIQQLDLIFTPTHSDIKMPARS 477
Query: 149 YRTAMSPLAASHMLI----------AAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEW 198
L +I A GT+D VRL D+ G + L GH DGI ++++
Sbjct: 478 LNNGACLLGTEAPMIGALQCYNSALATGTKDGIVRLWDLRVGKPVRLLEGHTDGITSLKF 537
Query: 199 STSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ LVTG D ++R WD+R + V+
Sbjct: 538 DSEK---LVTGSMDNSVRIWDLRTSSILDVI 565
>sp|Q17BB0|WDR12_AEDAE Ribosome biogenesis protein WDR12 homolog OS=Aedes aegypti
GN=AAEL005041 PE=3 SV=1
Length = 427
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 14/136 (10%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ IS W +D VT S+DH +K+WD + + + L+ SH
Sbjct: 260 GHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALSGIKSEI-----CGHKSFFDLSYSH 312
Query: 161 M--LIAAGTEDVQVRLCDIASGA---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215
+ LI A + D +RL D S + T GH + +V WST++E++ V+G D +
Sbjct: 313 LNGLIIAASPDKNLRLYDPKSNQGTIVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHV 372
Query: 216 RFWDIR--RAGCFRVL 229
+ WD R +A F ++
Sbjct: 373 KLWDYRSPKAPIFELI 388
Score = 40.4 bits (93), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 62/320 (19%), Positives = 113/320 (35%), Gaps = 74/320 (23%)
Query: 55 EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114
++ ++L+G D+++ ++ + GHIA + V + E G
Sbjct: 120 KDNWILTGCYDNTLNIWTTKGKHKLTIPGHIAPVKGVTWISLDEEKG------------- 166
Query: 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA--SHMLIAAGTEDVQV 172
+F + S D V +W+ N + K + + +AA S +A G+ D +
Sbjct: 167 ---VFASASQDQTVMLWEWNVKANSVECVQVCKGHERGVDCIAANRSKTRMATGSWDTML 223
Query: 173 RL--CDIASGAISQ-------------------TLSGHRDGIMTVEWSTSSEWILVTGGC 211
++ D+ + SQ TL+GHR+ I V+W + LVT
Sbjct: 224 KIWSTDVRNDGDSQPSTSKRQKLDTEKARTPVLTLAGHRECISGVQWIDDN--TLVTSSW 281
Query: 212 DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271
D I+ WD+ +G +S++ S L + R +S
Sbjct: 282 DHTIKIWDLALSGI-------KSEICGHKSFFDLSYSHLNGLIIAASPDKNLRLYDPKSN 334
Query: 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331
G V+ + +G SVR T + +S D+
Sbjct: 335 QGTIVKNTYLGHTQWVQSVRWS------------------------TTNEYLFVSGAYDN 370
Query: 332 RIRLWDVESGRNTLVNFETV 351
++LWD S + + FE +
Sbjct: 371 HVKLWDYRSPKAPI--FELI 388
Score = 40.4 bits (93), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 45/116 (38%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + S W + LFV+G+YD++VK+WD YR+ +P+
Sbjct: 345 GHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWD----------------YRSPKAPIFE-- 386
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
L GH D ++ +WS +++GG D ++R
Sbjct: 387 -------------------------LIGHEDKVLACDWSNPK--FILSGGSDNSVR 415
Score = 32.7 bits (73), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 118/315 (37%), Gaps = 33/315 (10%)
Query: 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGK---VYRTAMSPLAASHMLIAAGTEDVQVRLC 175
+TG YD+ + +W T +PG V L + A+ ++D V L
Sbjct: 124 ILTGCYDNTLNIWTTKGKH---KLTIPGHIAPVKGVTWISLDEEKGVFASASQDQTVMLW 180
Query: 176 DIASGAIS----QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW--DIRRAGCFRVL 229
+ A S Q GH G+ + + S+ + TG D ++ W D+R G
Sbjct: 181 EWNVKANSVECVQVCKGHERGVDCIA-ANRSKTRMATGSWDTMLKIWSTDVRNDG----- 234
Query: 230 DQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGS 289
SQ +R L K AG + + + N + SS
Sbjct: 235 -DSQPSTSKRQKLDTEKARTPVLTLAGHRECISGV----QWIDDNTLVTSSWDHTI---- 285
Query: 290 VRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV-NF 348
++ LS + + L + +++A D +RL+D +S + T+V N
Sbjct: 286 ---KIWDLALSGIKSEICGHKSFFDLSYSHLNGLIIAASPDKNLRLYDPKSNQGTIVKNT 342
Query: 349 ETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKT-CLTFRGHYEYVNCCCFSSQ 407
Q + ++ +TT + V VK +D S K GH + V C +S+
Sbjct: 343 YLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWDYRSPKAPIFELIGHEDKVLACDWSNP 402
Query: 408 DQELYTGGNDRQILV 422
+ + +GG+D + V
Sbjct: 403 -KFILSGGSDNSVRV 416
>sp|Q93847|YZLL_CAEEL Uncharacterized WD repeat-containing protein K04G11.4
OS=Caenorhabditis elegans GN=K04G11.4 PE=4 SV=1
Length = 395
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 307 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 366
AH +++G+K + DG Y+ S +D I++W R V +T+ + + + D
Sbjct: 105 AHKKSISGIKFSPDGRYMGSGSADCSIKIW-----RMDFVYEKTLMGHRLGINEFSWSSD 159
Query: 367 PAVVFVPCM--TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWC 424
++ V C VK FD+ SG+ T +GH YV CCCF+ + +G D I +WC
Sbjct: 160 SKLI-VSCSDDKLVKVFDVSSGRCVKTLKGHTNYVFCCCFNPSGTLIASGSFDETIRIWC 218
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 32/250 (12%)
Query: 15 PNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ 74
P N ++ T +L EI + HK SI+ ++ + RY+ SG++D S+ ++
Sbjct: 81 PTPMPNPSAANLWPTYKL--VAEIPNAHKKSISGIKFS-PDGRYMGSGSADCSIKIW--- 134
Query: 75 RATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN 134
R FV +K GH+ I+ W D+ L V+ S D VKV+D +
Sbjct: 135 --------------RMDFVYEKT-LMGHRLGINEFSWS-SDSKLIVSCSDDKLVKVFDVS 178
Query: 135 CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194
R V K G S LIA+G+ D +R+ +G ++ GH D +
Sbjct: 179 SGRCVKTLK--GHTNYVFCCCFNPSGTLIASGSFDETIRIWCARNGNTIFSIPGHEDPVS 236
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS-- 252
+V ++ + L +G DG +R WD C + L + PP+ K S +
Sbjct: 237 SVCFNRDGAY-LASGSYDGIVRIWDSTTGTCVKTLIDEE-----HPPITHVKFSPNGKYI 290
Query: 253 LSAGQNSSVK 262
L++ N+++K
Sbjct: 291 LASNLNNTLK 300
Score = 38.1 bits (87), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/136 (23%), Positives = 62/136 (45%), Gaps = 12/136 (8%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLA 157
GH+ +SS + + D +GSYD V++WD+ C + +++ + P + SP
Sbjct: 230 GHEDPVSS-VCFNRDGAYLASGSYDGIVRIWDSTTGTCVKTLIDEEHP-PITHVKFSP-- 285
Query: 158 ASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWS---TSSEWILVTGGCDGA 214
+ I A + ++L D + + +GH + V + T +WI V+G D
Sbjct: 286 -NGKYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWI-VSGSEDHK 343
Query: 215 IRFWDIRRAGCFRVLD 230
+ W+++ + LD
Sbjct: 344 VYIWNLQTREILQTLD 359
Score = 33.5 bits (75), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 61/142 (42%), Gaps = 20/142 (14%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
YL SG+ D V ++D T + ++D++H I+ + P G
Sbjct: 246 YLASGSYDGIVRIWDSTTGTCVKT-----------LIDEEHP-----PITHVKFSP--NG 287
Query: 118 LFVTGS-YDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
++ S ++ +K+WD RV+ + Y A + I +G+ED +V +
Sbjct: 288 KYILASNLNNTLKLWDYQKLRVLKEYTGHENSKYCVAANFSVTGGKWIVSGSEDHKVYIW 347
Query: 176 DIASGAISQTLSGHRDGIMTVE 197
++ + I QTL GH +M +
Sbjct: 348 NLQTREILQTLDGHNTAVMCTD 369
>sp|B4HWV6|WDR12_DROSE Ribosome biogenesis protein WDR12 homolog OS=Drosophila sechellia
GN=GM11446 PE=3 SV=1
Length = 420
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ ++S+ V R+ +G+ D+ + V+ + EG K V K G
Sbjct: 193 HERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDGVEGSSKRMKESGVRT-PKITLQG 250
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+ ++S+ W +D +TGS+D+ +KVWD + + ++ + S L +
Sbjct: 251 HRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKL---NR 305
Query: 162 LIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
LI + D +RL D + + T GH + TV WST+ E++ V+G D + W
Sbjct: 306 LILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 219 DIR 221
D R
Sbjct: 366 DCR 368
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 99/246 (40%), Gaps = 47/246 (19%)
Query: 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD- 115
+++LSG D+S+ ++ G HI GH I + W +D
Sbjct: 117 KWILSGCYDNSLNLW-------TNKGKHILTIS-----------GHTAPIKAVDWISLDE 158
Query: 116 -TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH--MLIAAGTEDVQV 172
TG FV+ S D +W N ++ K + + ++ S + A G+ D +
Sbjct: 159 ETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTML 218
Query: 173 R-----LCDIASGAISQ-----------TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ L D G+ + TL GHR+ + V+W ++ L+TG D ++
Sbjct: 219 KVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDAT--TLLTGSWDYTLK 276
Query: 217 FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276
WD+ G + ++S L R + L+A + +++ P R+ G+ V
Sbjct: 277 VWDLSLEGIKTEISTNKSIFDASYSKLNRLI-----LTASADKNLRLYDP--RTNQGSVV 329
Query: 277 RQSSVG 282
R + +G
Sbjct: 330 RNTYLG 335
>sp|Q5ZIU8|KTNB1_CHICK Katanin p80 WD40 repeat-containing subunit B1 OS=Gallus gallus
GN=KATNB1 PE=2 SV=2
Length = 657
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H I SLQ+ EE +++G+ S+ V+D++ A R++ G
Sbjct: 62 HTTPIESLQISAKEE-LIVAGSQSGSIRVWDLEAAKIL---------RTLL--------G 103
Query: 102 HKYAISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
HK I S ++P G FV +GS D +K+WD + +K + R +
Sbjct: 104 HKANICSLDFHPY--GSFVASGSLDTDIKLWDVRRKGCIFKYKSHTQAVRCLR--FSPDG 159
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+A+ +D V+L D+ +G + +GH + VE+ SE++L +G D IRFWD+
Sbjct: 160 KWLASAADDHTVKLWDLTAGKVMFEFTGHSGPVNVVEFH-PSEYLLASGSSDRTIRFWDL 218
Query: 221 RR 222
+
Sbjct: 219 EK 220
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 59/126 (46%), Gaps = 3/126 (2%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
H +SS + L TG D V VW N VM+ + G ++A
Sbjct: 18 AHSSNVSSLVLGKSTGRLLATGGDDCRVNVWSVNKPNCVMS--LTGHTTPIESLQISAKE 75
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
LI AG++ +R+ D+ + I +TL GH+ I ++++ ++ +G D I+ WD+
Sbjct: 76 ELIVAGSQSGSIRVWDLEAAKILRTLLGHKANICSLDFHPYGSFV-ASGSLDTDIKLWDV 134
Query: 221 RRAGCF 226
RR GC
Sbjct: 135 RRKGCI 140
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 92/262 (35%), Gaps = 80/262 (30%)
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
L+A G +D +V + + +L+GH I +++ S E ++V G G+IR WD+
Sbjct: 35 LLATGGDDCRVNVWSVNKPNCVMSLTGHTTPIESLQISAKEE-LIVAGSQSGSIRVWDLE 93
Query: 222 RAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281
A R L L K +I S V A+G+ +
Sbjct: 94 AAKILRTL-------------LGHKANICSLDFHPYGSFV---------ASGSLDTDIKL 131
Query: 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341
+ KG + + +H AV L+ + DG +L SA D ++LWD+ +G
Sbjct: 132 WDVRRKGCIF------------KYKSHTQAVRCLRFSPDGKWLASAADDHTVKLWDLTAG 179
Query: 342 RNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNC 401
+ V FE F GH VN
Sbjct: 180 K---VMFE------------------------------------------FTGHSGPVNV 194
Query: 402 CCFSSQDQELYTGGNDRQILVW 423
F + L +G +DR I W
Sbjct: 195 VEFHPSEYLLASGSSDRTIRFW 216
>sp|B4Q9T6|WDR12_DROSI Ribosome biogenesis protein WDR12 homolog OS=Drosophila simulans
GN=GD22226 PE=3 SV=1
Length = 420
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 84/183 (45%), Gaps = 10/183 (5%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ ++S+ V R+ +G+ D+ + V+ + EG K V K G
Sbjct: 193 HERGVDSVSVSPDGLRFA-TGSWDTMLKVWSAELDDGVEGSSKRMKESGV-RTPKITLQG 250
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHM 161
H+ ++S+ W +D +TGS+D+ +KVWD + + ++ + S L +
Sbjct: 251 HRESVSAVQW--MDATTLLTGSWDYTLKVWDLSLEGIKTEISTNKSIFDASYSKL---NR 305
Query: 162 LIAAGTEDVQVRLCDIASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218
LI + D +RL D + + T GH + TV WST+ E++ V+G D + W
Sbjct: 306 LILTASADKNLRLYDPRTNQGSVVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNKLW 365
Query: 219 DIR 221
D R
Sbjct: 366 DCR 368
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 100/246 (40%), Gaps = 47/246 (19%)
Query: 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD- 115
+++LSG D+S+ ++ + G HI GH I + W +D
Sbjct: 117 KWILSGCYDNSLNLWTNK-------GKHILTIS-----------GHTAPIKAVDWISLDE 158
Query: 116 -TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH--MLIAAGTEDVQV 172
TG FV+ S D +W N ++ K + + ++ S + A G+ D +
Sbjct: 159 ETGRFVSTSQDQTAMLWKWNVGSNAVDCVSVCKGHERGVDSVSVSPDGLRFATGSWDTML 218
Query: 173 R-----LCDIASGAISQ-----------TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ L D G+ + TL GHR+ + V+W ++ L+TG D ++
Sbjct: 219 KVWSAELDDGVEGSSKRMKESGVRTPKITLQGHRESVSAVQWMDAT--TLLTGSWDYTLK 276
Query: 217 FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276
WD+ G + ++S L R + L+A + +++ P R+ G+ V
Sbjct: 277 VWDLSLEGIKTEISTNKSIFDASYSKLNRLI-----LTASADKNLRLYDP--RTNQGSVV 329
Query: 277 RQSSVG 282
R + +G
Sbjct: 330 RNTYLG 335
>sp|B4MU54|WDR12_DROWI Ribosome biogenesis protein WDR12 homolog OS=Drosophila willistoni
GN=GK23981 PE=3 SV=1
Length = 423
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 68/142 (47%), Gaps = 10/142 (7%)
Query: 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAAS 159
GH+ +IS+ W +DT +T S+DH +K+WD + + ++ + S L
Sbjct: 252 QGHRESISAVQW--IDTSTLLTTSWDHTMKIWDLSLEGIKTEISTNKSIFDASYSNL--- 306
Query: 160 HMLIAAGTEDVQVRLCDIASGA---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+ LI + D +RL D + + T GH + TV WST+ E++ V+G D +
Sbjct: 307 NRLIVTASADKNLRLYDPRTNQGSIVRNTYLGHNAWVQTVMWSTTEEFLFVSGAYDNQNK 366
Query: 217 FWDIR--RAGCFRVLDQSQSQL 236
WD R +A + +L + L
Sbjct: 367 LWDCRSPKAPLYDLLGHGEKVL 388
Score = 39.7 bits (91), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 85/207 (41%), Gaps = 37/207 (17%)
Query: 101 GHKYAISSAIWYPVDT--GLFVTGSYDHYVKVW----DTNCTRVVMNFKMPGK-VYRTAM 153
GH I + W +D G FV+ S D V +W D+N V K + V ++
Sbjct: 144 GHTAPIKAVDWISLDNDIGRFVSSSQDQTVMLWQWNVDSNAVECVSICKGHERGVDSISV 203
Query: 154 SPLAASHMLIAAGTEDVQVRLC----DIASGAIS--------------QTLSGHRDGIMT 195
SP A A G+ D +++ D A G + TL GHR+ I
Sbjct: 204 SPDATR---FATGSWDTMLKVWSAAEDDAGGDAASSKRPKENGVRTPIMTLQGHRESISA 260
Query: 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255
V+W +S L+T D ++ WD+ G + ++S L R + ++A
Sbjct: 261 VQWIDTS--TLLTTSWDHTMKIWDLSLEGIKTEISTNKSIFDASYSNLNRLI-----VTA 313
Query: 256 GQNSSVKPRAPQKRSANGNGVRQSSVG 282
+ +++ P R+ G+ VR + +G
Sbjct: 314 SADKNLRLYDP--RTNQGSIVRNTYLG 338
>sp|B0W517|WDR12_CULQU Ribosome biogenesis protein WDR12 homolog OS=Culex quinquefasciatus
GN=CPIJ001500 PE=3 SV=2
Length = 425
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 62/134 (46%), Gaps = 10/134 (7%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ IS W +D VT S+DH +K+WD + + + S L
Sbjct: 258 GHRECISGVQW--IDDNTLVTSSWDHTIKIWDLALNGIKSEISGNKSFFDLSYSKLNG-- 313
Query: 161 MLIAAGTEDVQVRLCDIASGA---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
LI + D +RL D S + T GH + +V WST++E++ V+G D ++
Sbjct: 314 -LIITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWSTTNEYLFVSGAYDNHVKL 372
Query: 218 WDIR--RAGCFRVL 229
WD R +A F ++
Sbjct: 373 WDYRSPKAPIFELI 386
Score = 39.7 bits (91), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 45/116 (38%), Gaps = 45/116 (38%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + S W + LFV+G+YD++VK+WD YR+ +P+
Sbjct: 343 GHTQWVQSVRWSTTNEYLFVSGAYDNHVKLWD----------------YRSPKAPIFE-- 384
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
L GH D ++ +WS +++GG D ++R
Sbjct: 385 -------------------------LIGHEDKVLACDWSNPR--FILSGGSDNSVR 413
Score = 38.9 bits (89), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 58/277 (20%), Positives = 97/277 (35%), Gaps = 61/277 (22%)
Query: 101 GHKYAISSAIWYPVDT--GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA 158
GH + W +D G+F + S D V +W+ N + K + + +AA
Sbjct: 145 GHIAPVKGVTWISLDEEKGVFASASQDQTVMLWEWNVAANSVECVQVCKGHERGVDCIAA 204
Query: 159 --SHMLIAAGTEDVQVRL--CDIASGA------------ISQ--------TLSGHRDGIM 194
S +A G+ D +++ D+ SG + Q TL+GHR+ I
Sbjct: 205 NGSKTKMATGSWDTMLKIWSTDVRSGGGDSEPSTSKRQKLDQGSARTPLMTLAGHRECIS 264
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254
V+W + LVT D I+ WD+ G +S++ S L
Sbjct: 265 GVQWIDDN--TLVTSSWDHTIKIWDLALNGI-------KSEISGNKSFFDLSYSKLNGLI 315
Query: 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTG 314
+ R +S G V+ + +G SVR
Sbjct: 316 ITASPDKNLRLYDPKSNQGTLVKNTYLGHTQWVQSVRWS--------------------- 354
Query: 315 LKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV 351
T + +S D+ ++LWD S + + FE +
Sbjct: 355 ---TTNEYLFVSGAYDNHVKLWDYRSPKAPI--FELI 386
>sp|O76734|TUP1_DICDI General transcriptional corepressor tupA OS=Dictyostelium
discoideum GN=tupA PE=2 SV=1
Length = 579
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 24/193 (12%)
Query: 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101
H+ I SL ++ R+++SG+ D ++D+++ + F + + E G
Sbjct: 368 HELDIYSLDYS-SDGRFIVSGSGDKKAKIWDIEKG------------KCAFTLGNE-EVG 413
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASH 160
K ++S P D L GS D+ V++WD + ++ VY A SP S
Sbjct: 414 PKNGVTSVAMSP-DGRLVAAGSLDNIVRLWDAQTGYFLERYEGHLDSVYSVAFSPDGKS- 471
Query: 161 MLIAAGTEDVQVRLCDIASGAISQ----TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
+A+G+ D ++L D++ T +GH+D +++V +S W L++G D +++
Sbjct: 472 --LASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSW-LISGSKDRSVQ 528
Query: 217 FWDIRRAGCFRVL 229
FWD R +L
Sbjct: 529 FWDPRNGTTHMML 541
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 27/168 (16%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
YL +GA D +V V+D+ H K + F +GH+ I S + Y D
Sbjct: 341 YLATGAEDKTVKVWDI----------HTKKIQHTF-------YGHELDIYS-LDYSSDGR 382
Query: 118 LFVTGSYDHYVKVWDTN---CTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGTEDVQV 172
V+GS D K+WD C + N ++ K V AMSP L+AAG+ D V
Sbjct: 383 FIVSGSGDKKAKIWDIEKGKCAFTLGNEEVGPKNGVTSVAMSPDG---RLVAAGSLDNIV 439
Query: 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
RL D +G + GH D + +V +S + L +G D +++ WD+
Sbjct: 440 RLWDAQTGYFLERYEGHLDSVYSVAFSPDGK-SLASGSLDKSLKLWDL 486
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/271 (22%), Positives = 104/271 (38%), Gaps = 47/271 (17%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
+A G ED V++ DI + I T GH I ++++S+ +I V+G D + WDI +
Sbjct: 342 LATGAEDKTVKVWDIHTKKIQHTFYGHELDIYSLDYSSDGRFI-VSGSGDKKAKIWDIEK 400
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG-NGVRQSSV 281
C L N V P+ NG V S
Sbjct: 401 GKCAFTLG---------------------------NEEVGPK-------NGVTSVAMSPD 426
Query: 282 GRIPAKGSVRQRLHPGMLSSQ-----DRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 336
GR+ A GS+ + + +Q +R H +V + + DG L S D ++LW
Sbjct: 427 GRLVAAGSLDNIVR--LWDAQTGYFLERYEGHLDSVYSVAFSPDGKSLASGSLDKSLKLW 484
Query: 337 DVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-AVKAFDIWSGKTCLTFRGH 395
D+ R+ T + +A + D + + +V+ +D +G T + +GH
Sbjct: 485 DLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFWDPRNGTTHMMLQGH 544
Query: 396 YEYVNCCCFSSQDQE---LYTGGNDRQILVW 423
V S ++ TG D + +W
Sbjct: 545 KNSVISVALSPKNNSHGVFATGSGDFRSRLW 575
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
Query: 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116
+YL +G + S +YDV K FV D+ + G Y I S + P D
Sbjct: 294 KYLATGC-NRSAQIYDVD----------TGKKVHAFV-DESEKDGDLY-IRSVCFSP-DG 339
Query: 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176
TG+ D VKVWD + ++ F G ++ I +G+ D + ++ D
Sbjct: 340 NYLATGAEDKTVKVWDIHTKKIQHTFY--GHELDIYSLDYSSDGRFIVSGSGDKKAKIWD 397
Query: 177 IASGAISQTLS----GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219
I G + TL G ++G+ +V S ++ G D +R WD
Sbjct: 398 IEKGKCAFTLGNEEVGPKNGVTSVAMSPDGR-LVAAGSLDNIVRLWD 443
Score = 37.7 bits (86), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 13/122 (10%)
Query: 311 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVV 370
VT + ++ DG + + D+ +RLWD ++G + R + + P
Sbjct: 417 GVTSVAMSPDGRLVAAGSLDNIVRLWDAQTG------YFLERYEGHLDSVYSVAFSPDGK 470
Query: 371 FVPCMTAVKAFDIWS-------GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
+ + K+ +W + TF GH ++V FS L +G DR + W
Sbjct: 471 SLASGSLDKSLKLWDLSGSRSRSRCRATFNGHKDFVLSVAFSPDGSWLISGSKDRSVQFW 530
Query: 424 CP 425
P
Sbjct: 531 DP 532
>sp|Q7QJ33|WDR12_ANOGA Ribosome biogenesis protein WDR12 homolog OS=Anopheles gambiae
GN=AGAP007244 PE=3 SV=3
Length = 428
Score = 64.7 bits (156), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 10/142 (7%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH+ +S W +D T S+DH +K+WD + + F + + SPL
Sbjct: 259 GHREFVSGVQW--IDNTTIATCSWDHTIKLWDLSMGGIKTEFTGNKSFFDLSYSPLNG-- 314
Query: 161 MLIAAGTEDVQVRLCDIAS---GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
+I + D +RL D S + T GH + T WST++E++ V+G D ++
Sbjct: 315 -MIITASPDKNLRLYDPRSKHGNFVKNTYLGHSQWVQTCRWSTTNEYLFVSGAYDNRVKL 373
Query: 218 WDIR--RAGCFRVLDQSQSQLG 237
WD R +A F ++ L
Sbjct: 374 WDYRSPKAPIFELIGHEDKVLA 395
Score = 41.6 bits (96), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/319 (19%), Positives = 123/319 (38%), Gaps = 79/319 (24%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD-- 115
++L+G D++V +++ + KH+ GH A+ W ++
Sbjct: 123 WILTGTYDNTVNLWNTK-----------GKHKLTIP-------GHVAAVKGVAWISLNEQ 164
Query: 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAA--SHMLIAAGTEDVQVR 173
TG+F + S+D + +W+ N T K + + +A + +A+G+ D ++
Sbjct: 165 TGVFASASHDQTIMIWEWNMTTNTAECVHVCKGHERGVGCIAVNPAKTQMASGSMDTMLK 224
Query: 174 LCDIASGA------------ISQ--------TLSGHRDGIMTVEWSTSSEWILVTGGCDG 213
+ A + Q TL+GHR+ + V+W ++ + T D
Sbjct: 225 IWSTELQADKGEPSATKKAKLEQDNVRTPVVTLAGHREFVSGVQWIDNT--TIATCSWDH 282
Query: 214 AIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG 273
I+ WD+ G ++S L + ++A + +++ P RS +G
Sbjct: 283 TIKLWDLSMGGIKTEFTGNKSFFDLSYSPLNGMI-----ITASPDKNLRLYDP--RSKHG 335
Query: 274 NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS-DSR 332
N V+ + +G H V + + YL +G+ D+R
Sbjct: 336 NFVKNTYLG-------------------------HSQWVQTCRWSTTNEYLFVSGAYDNR 370
Query: 333 IRLWDVESGRNTLVNFETV 351
++LWD S + + FE +
Sbjct: 371 VKLWDYRSPKAPI--FELI 387
Score = 39.3 bits (90), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 47/123 (38%), Gaps = 45/123 (36%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH + + W + LFV+G+YD+ VK+WD YR+ +P+
Sbjct: 344 GHSQWVQTCRWSTTNEYLFVSGAYDNRVKLWD----------------YRSPKAPIFE-- 385
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
L GH D ++ +WS +++GG D A+R +
Sbjct: 386 -------------------------LIGHEDKVLACDWSNPK--YILSGGSDNAVRVFKS 418
Query: 221 RRA 223
R A
Sbjct: 419 RIA 421
>sp|Q09855|POF11_SCHPO F-box/WD repeat-containing protein pof11 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=pof11 PE=1 SV=2
Length = 506
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 86/185 (46%), Gaps = 27/185 (14%)
Query: 53 LTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWY 112
+ E Y++S + D + V+ + + E H+ + GH +++S + Y
Sbjct: 310 VVSENYIISSSRDHTARVWRLDATSPAEACMHVLR-------------GHLASVNS-VQY 355
Query: 113 PVDTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTED 169
TGL VT S D ++ WD +C R++ ++ ++ + I +G+ D
Sbjct: 356 SSKTGLIVTASSDRTLRTWDITTGHCIRII-------HAHQRGIACAQYNGKFIVSGSSD 408
Query: 170 VQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229
+ +R+ + +SG + + L GH D I TV ++ +V+GG DG +R W+ VL
Sbjct: 409 LTIRIFEASSGKLLRMLQGHEDLIRTVRFNDEK---IVSGGYDGTVRIWNFNTGEQHCVL 465
Query: 230 DQSQS 234
S++
Sbjct: 466 HNSRN 470
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 43 KGSINSLQVDLTEERYLLSGASDSSVAVYDVQ-RATDYEGGGHIAKHRSVFVVDKQHEHG 101
+ +++S+ ++ ++SG+ D +V+V+DV R Y+ GH SV +D
Sbjct: 218 RATLDSVYCVQYDDEIMVSGSKDRTVSVWDVNSRFILYKLYGHSG---SVLCLD------ 268
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY---RTAMSPLAA 158
+ L V+GS D + +WD R P KVY + +
Sbjct: 269 ----------FCRRRNLLVSGSSDSTIIIWDWQNRR-------PLKVYFGHTDNVLGVVV 311
Query: 159 SHMLIAAGTEDVQVRLCDI----ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA 214
S I + + D R+ + + A L GH + +V++S+ + ++VT D
Sbjct: 312 SENYIISSSRDHTARVWRLDATSPAEACMHVLRGHLASVNSVQYSSKTG-LIVTASSDRT 370
Query: 215 IRFWDIRRAGCFRVLDQSQ 233
+R WDI C R++ Q
Sbjct: 371 LRTWDITTGHCIRIIHAHQ 389
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 23/196 (11%)
Query: 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221
++ +G++D V + D+ S I L GH ++ +++ +LV+G D I WD +
Sbjct: 233 IMVSGSKDRTVSVWDVNSRFILYKLYGHSGSVLCLDFCRRRN-LLVSGSSDSTIIIWDWQ 291
Query: 222 RAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281
+V G +L VS + +S+ ++ + + S
Sbjct: 292 NRRPLKVY------FGHTDNVLGVVVSENYIISSSRDHTARVWRLDATSP-AEACMHVLR 344
Query: 282 GRIPAKGSVRQRLHPGML--SSQDRATAHYGAVTG--LKVTE-----------DGMYLLS 326
G + + SV+ G++ +S DR + TG +++ +G +++S
Sbjct: 345 GHLASVNSVQYSSKTGLIVTASSDRTLRTWDITTGHCIRIIHAHQRGIACAQYNGKFIVS 404
Query: 327 AGSDSRIRLWDVESGR 342
SD IR+++ SG+
Sbjct: 405 GSSDLTIRIFEASSGK 420
>sp|A2QP30|LIS1_ASPNC Nuclear distribution protein nudF OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=nudF PE=3 SV=1
Length = 443
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 121/281 (43%), Gaps = 54/281 (19%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTA---MSPLA- 157
H+ A++ ++PV T L +GS D +K+WD G++ RT M P++
Sbjct: 112 HRDAVTCVAFHPVFTSL-ASGSEDCTIKIWDWEL----------GELERTLKGHMRPVSD 160
Query: 158 ------ASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSSEWILVTGG 210
H ++A+ + D+Q++L D A +TLSGH + V + ++ IL++
Sbjct: 161 LDFGGQKGHTILASCSSDLQIKLWDPNKDYANVRTLSGHDHSVSAVRFLRQTDNILISAS 220
Query: 211 CDGAIRFWDIRRAGCFRVLDQSQSQL---------------GRRPPLLKRKVSISKSLSA 255
D IR WD+ C +V+D S + GR + +V+ +KS+++
Sbjct: 221 RDATIRIWDVSTGYCVKVIDSQGSWINDVSPSFDGKWLVTGGRDQAAMVWEVASAKSVAS 280
Query: 256 --GQNSSVK-----PRAPQKRSANGNGVRQ----SSVGRIPAKGSVRQRLHPGMLSSQDR 304
G + ++ P + K A G++ SS A G+ + + + S+ R
Sbjct: 281 LIGHENFIECCVFAPPSSYKHLAAIAGLKTAPPASSSSEFIATGARDKTIK--LWESRGR 338
Query: 305 ----ATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341
H V GL G YL+S D IR WD+ G
Sbjct: 339 LIKTLVGHDNWVRGLLFHPGGKYLISVADDKTIRCWDLSQG 379
>sp|Q09990|LIN23_CAEEL F-box/WD repeat-containing protein lin-23 OS=Caenorhabditis elegans
GN=lin-23 PE=1 SV=2
Length = 665
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 29/194 (14%)
Query: 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQ 97
I+S H GS+ LQ D R ++SG+SD++V V+DV+ + H
Sbjct: 257 ILSGHTGSVLCLQYD---NRVIISGSSDATVRVWDVETGECIKTLIH------------- 300
Query: 98 HEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-VVMNFKMPGKVYRTAMSPL 156
H A+ + G+ VT S D + VWD R + + + G +R A++ +
Sbjct: 301 ----HCEAV---LHLRFANGIMVTCSKDRSIAVWDMVSPRDITIRRVLVG--HRAAVNVV 351
Query: 157 AASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIR 216
I + + D +++ + + +TL+GHR GI +++ ++V+G D IR
Sbjct: 352 DFDDRYIVSASGDRTIKVWSMDTLEFVRTLAGHRRGIACLQYRGR---LVVSGSSDNTIR 408
Query: 217 FWDIRRAGCFRVLD 230
WDI C RVL+
Sbjct: 409 LWDIHSGVCLRVLE 422
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 49/263 (18%)
Query: 163 IAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222
I +G D +++ D + S+ LSGH ++ +++ ++++G D +R WD+
Sbjct: 235 IVSGLRDNTIKIWDRKDYSCSRILSGHTGSVLCLQYDNR---VIISGSSDATVRVWDVET 291
Query: 223 AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282
C + L + V+ SK S V PR +R+ VG
Sbjct: 292 GECIKTLIHHCEAVLHLRFANGIMVTCSKDRSIAVWDMVSPRDIT--------IRRVLVG 343
Query: 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 342
H AV V D Y++SA D I++W +++
Sbjct: 344 -------------------------HRAAVN--VVDFDDRYIVSASGDRTIKVWSMDT-- 374
Query: 343 NTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT--AVKAFDIWSGKTCLTFRGHYEYVN 400
E VR +A Q + V + ++ +DI SG GH E V
Sbjct: 375 -----LEFVRTLAGHRRGIACLQYRGRLVVSGSSDNTIRLWDIHSGVCLRVLEGHEELVR 429
Query: 401 CCCFSSQDQELYTGGNDRQILVW 423
C F ++ + +G D +I VW
Sbjct: 430 CIRFD--EKRIVSGAYDGKIKVW 450
Score = 42.7 bits (99), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 94/231 (40%), Gaps = 50/231 (21%)
Query: 115 DTGLFVTGSYDHYVKVWDT---NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ 171
D V+G D+ +K+WD +C+R++ + ++ L + +I +G+ D
Sbjct: 231 DDDKIVSGLRDNTIKIWDRKDYSCSRILSG-------HTGSVLCLQYDNRVIISGSSDAT 283
Query: 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231
VR+ D+ +G +TL H + ++ + ++ I+VT D +I WD+
Sbjct: 284 VRVWDVETGECIKTLIHHCEAVLHLRFANG---IMVTCSKDRSIAVWDM----------- 329
Query: 232 SQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS-ANGNGVRQSSVGRIPAKGSV 290
+ R ++I + L G ++V R + +G R V + V
Sbjct: 330 ----------VSPRDITIRRVL-VGHRAAVNVVDFDDRYIVSASGDRTIKVWSMDTLEFV 378
Query: 291 RQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341
R H + L+ G ++S SD+ IRLWD+ SG
Sbjct: 379 RT------------LAGHRRGIACLQYR--GRLVVSGSSDNTIRLWDIHSG 415
>sp|Q0UXP3|YTM1_PHANO Ribosome biogenesis protein YTM1 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=YTM1 PE=3 SV=1
Length = 471
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 64/124 (51%), Gaps = 6/124 (4%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASH 160
GH +SS I+ P D + + S+DH +K WD + V + P S
Sbjct: 285 GHSSPVSSVIFKPDDATVAYSASHDHTLKTWDLPTAQCVDTRTTGHSLLSLCAIP---SR 341
Query: 161 MLIAAGTEDVQVRLCD--IASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRF 217
LIA GT + L D +++ IS TL GH++G+++++ SS+ LV+G DG ++
Sbjct: 342 NLIATGTSARHITLIDPRVSATQISVMTLRGHKNGVVSLDTDPSSDHGLVSGSHDGTVQI 401
Query: 218 WDIR 221
WD+R
Sbjct: 402 WDLR 405
>sp|Q3SWX8|RBBP7_BOVIN Histone-binding protein RBBP7 OS=Bos taurus GN=RBBP7 PE=2 SV=1
Length = 425
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ G I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + + T H+D I V WS +E IL + G D + WD+ + G +QS
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG----EEQSAE 356
Query: 235 QLGRRPPLL 243
PP L
Sbjct: 357 DAEDGPPEL 365
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY--RTAMSPLAA 158
GH+ W +G ++ S DH V +WD N ++ +A+ A
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 159 SHM----LIAAGTEDVQVRLCDIASGAISQT---LSGHRDGIMTVEWSTSSEWILVTGGC 211
H+ L + +D ++ + D S S+ + H + + ++ SE+IL TG
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 212 DGAIRFWDIRR 222
D + WD+R
Sbjct: 294 DKTVALWDLRN 304
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 31 QLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS 90
++ + K I + H + + L E S A D + ++D + T +
Sbjct: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT---------TSKP 264
Query: 91 VFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--V 148
+VD H ++ + P + TGS D V +WD ++ ++ K +
Sbjct: 265 SHLVD-----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI 319
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG--------------IM 194
++ SP + +L ++GT D ++ + D++ Q+ DG I
Sbjct: 320 FQVHWSPHNET-ILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDI 220
W+ + W++ + D ++ W +
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q2KJJ5|TBL3_BOVIN Transducin beta-like protein 3 OS=Bos taurus GN=TBL3 PE=2 SV=1
Length = 800
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 103/225 (45%), Gaps = 13/225 (5%)
Query: 18 FANRVKSHRLSTLQLSNYKEIV-----SPHKGSINSLQVDLTEERYLLSGASDSSVAVYD 72
FA+ K + +++ E+ S H S+ ++ +E +L++G+ D +V ++
Sbjct: 391 FASCAKDQSIRVWRMNKSGEVACVAQGSGHTHSVGTICCSRLKETFLVTGSQDCTVKLWP 450
Query: 73 VQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWD 132
+ A +G GH + VF+ + +H H I+S P D L TGS D K+W
Sbjct: 451 LPEALLSKGTGH--EGGPVFLQAQATQHCHDKDINSVAVAPNDK-LLATGSQDRTAKLWA 507
Query: 133 TNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD 191
+++ F + ++ SP+ ++A + D ++L + + +T GH
Sbjct: 508 LPRCQLLGTFSGHRRGLWCVQFSPM---DQVLATASADGTIKLWALQDFSCLKTFEGHDA 564
Query: 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL 236
++ V + + +L + G DG ++ W I+ C R LD + ++
Sbjct: 565 SVLKVAFVSRGTQLL-SSGSDGLLKLWTIKNNECVRTLDAHEDKV 608
Score = 42.0 bits (97), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 72/332 (21%), Positives = 123/332 (37%), Gaps = 46/332 (13%)
Query: 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASH 160
H +++ + P T L TG D V+VWD +F+ PG V+ A P A
Sbjct: 108 HTAPVATMAFDPTST-LLATGGCDGAVRVWDVVRCYGTHHFRGSPGVVHLVAFHPDPA-R 165
Query: 161 MLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220
+L+ + D +R+ + + L+ H + ++ +S +L +G D WD+
Sbjct: 166 LLLFSSAADTSIRVWSLQERSCLAVLTAHYSAVTSLTFSADGHTMLSSGR-DKICVIWDL 224
Query: 221 RRAGCFRVLDQSQS-----QLGRRP-PLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274
R R + +S L P P L K + L+AG +++
Sbjct: 225 RSLQATRTVPVFESVEAAVLLPEEPAPELGVKSAGLHFLTAGDQGALR------------ 272
Query: 275 GVRQSSVGRIPAKGSVRQRLH-PGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRI 333
V +++ GR +QRL PG +T + LLS +D +
Sbjct: 273 -VWEAASGRCV---HAQQRLRGPGR------------ELTHCTLAHAAGLLLSVTADHNL 316
Query: 334 RLWDVES--GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLT 391
L+D S R + L ++ +D VV +K FD+ + C
Sbjct: 317 LLYDARSLRLRKQFAGYSEEVLD----VRFLGPEDSHVVVASNSPCLKVFDLQTS-ACQI 371
Query: 392 FRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423
GH + V + + + D+ I VW
Sbjct: 372 LHGHTDIVLALDVFRKGRLFASCAKDQSIRVW 403
Score = 33.1 bits (74), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 59/312 (18%), Positives = 121/312 (38%), Gaps = 31/312 (9%)
Query: 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
GL ++ + DH + ++D R+ F +V SH+++A+ + ++V
Sbjct: 305 GLLLSVTADHNLLLYDARSLRLRKQFAGYSEEVLDVRFLGPEDSHVVVASNSPCLKV--F 362
Query: 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQ 235
D+ + A Q L GH D ++ ++ + + D +IR W + ++G + Q
Sbjct: 363 DLQTSA-CQILHGHTDIVLALDVFRKGR-LFASCAKDQSIRVWRMNKSGEVACVAQGSGH 420
Query: 236 LGRRPPLLKRKVSISKSLSAGQNSSVKP-RAPQKRSANGNGVRQSSVGRIPAKGSVRQRL 294
+ ++ + ++ Q+ +VK P+ + G G
Sbjct: 421 THSVGTICCSRLKETFLVTGSQDCTVKLWPLPEALLSKGTGHEGG--------------- 465
Query: 295 HPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354
P L +Q H + + V + L + D +LW + R L+ + +
Sbjct: 466 -PVFLQAQATQHCHDKDINSVAVAPNDKLLATGSQDRTAKLWALP--RCQLLGTFSGHRR 522
Query: 355 TSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGK--TCL-TFRGHYEYVNCCCFSSQDQEL 411
+Q + P + +A +W+ + +CL TF GH V F S+ +L
Sbjct: 523 GLWCVQFS----PMDQVLATASADGTIKLWALQDFSCLKTFEGHDASVLKVAFVSRGTQL 578
Query: 412 YTGGNDRQILVW 423
+ G+D + +W
Sbjct: 579 LSSGSDGLLKLW 590
>sp|Q71UF4|RBBP7_RAT Histone-binding protein RBBP7 OS=Rattus norvegicus GN=Rbbp7 PE=2
SV=1
Length = 425
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ G I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + + T H+D I V WS +E IL + G D + WD+ + G +QS
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG----EEQSAE 356
Query: 235 QLGRRPPLL 243
PP L
Sbjct: 357 DAEDGPPEL 365
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY--RTAMSPLAA 158
GH+ W +G ++ S DH V +WD N ++ +A+ A
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 159 SHM----LIAAGTEDVQVRLCDIASGAISQT---LSGHRDGIMTVEWSTSSEWILVTGGC 211
H+ L + +D ++ + D S S+ + H + + ++ SE+IL TG
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 212 DGAIRFWDIRR 222
D + WD+R
Sbjct: 294 DKTVALWDLRN 304
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 31 QLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS 90
++ + K I + H + + L E S A D + ++D + T +
Sbjct: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT---------TSKP 264
Query: 91 VFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--V 148
+VD H ++ + P + TGS D V +WD ++ ++ K +
Sbjct: 265 SHLVD-----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI 319
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG--------------IM 194
++ SP + +L ++GT D ++ + D++ Q+ DG I
Sbjct: 320 FQVHWSPHNET-ILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDI 220
W+ + W++ + D ++ W +
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q4R304|RBBP7_MACFA Histone-binding protein RBBP7 OS=Macaca fascicularis GN=RBBP7 PE=2
SV=1
Length = 425
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ G I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + + T H+D I V WS +E IL + G D + WD+ + G +QS
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG----EEQSAE 356
Query: 235 QLGRRPPLL 243
PP L
Sbjct: 357 DAEDGPPEL 365
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY--RTAMSPLAA 158
GH+ W +G ++ S DH V +WD N ++ +A+ A
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 159 SHM----LIAAGTEDVQVRLCDIASGAISQT---LSGHRDGIMTVEWSTSSEWILVTGGC 211
H+ L + +D ++ + D S S+ + H + + ++ SE+IL TG
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 212 DGAIRFWDIRR 222
D + WD+R
Sbjct: 294 DKTVALWDLRN 304
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 31 QLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS 90
++ + K I + H + + L E S A D + ++D + T +
Sbjct: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT---------TSKP 264
Query: 91 VFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--V 148
+VD H ++ + P + TGS D V +WD ++ ++ K +
Sbjct: 265 SHLVD-----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI 319
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG--------------IM 194
++ SP + +L ++GT D ++ + D++ Q+ DG I
Sbjct: 320 FQVHWSPHNET-ILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDI 220
W+ + W++ + D ++ W +
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q16576|RBBP7_HUMAN Histone-binding protein RBBP7 OS=Homo sapiens GN=RBBP7 PE=1 SV=1
Length = 425
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ G I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + + T H+D I V WS +E IL + G D + WD+ + G +QS
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG----EEQSAE 356
Query: 235 QLGRRPPLL 243
PP L
Sbjct: 357 DAEDGPPEL 365
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY--RTAMSPLAA 158
GH+ W +G ++ S DH V +WD N ++ +A+ A
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 159 SHM----LIAAGTEDVQVRLCDIASGAISQT---LSGHRDGIMTVEWSTSSEWILVTGGC 211
H+ L + +D ++ + D S S+ + H + + ++ SE+IL TG
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 212 DGAIRFWDIRR 222
D + WD+R
Sbjct: 294 DKTVALWDLRN 304
Score = 32.7 bits (73), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 31 QLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS 90
++ + K I + H + + L E S A D + ++D + T +
Sbjct: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT---------TSKP 264
Query: 91 VFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--V 148
+VD H ++ + P + TGS D V +WD ++ ++ K +
Sbjct: 265 SHLVD-----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI 319
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG--------------IM 194
++ SP + +L ++GT D ++ + D++ Q+ DG I
Sbjct: 320 FQVHWSPHNET-ILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDI 220
W+ + W++ + D ++ W +
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM 403
>sp|Q60973|RBBP7_MOUSE Histone-binding protein RBBP7 OS=Mus musculus GN=Rbbp7 PE=1 SV=1
Length = 425
Score = 63.9 bits (154), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 17/189 (8%)
Query: 58 YLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117
+LLS + D +V ++D+ G I +++F GH + W+ +
Sbjct: 191 HLLSASDDHTVCLWDINAGP---KEGKIVDAKAIFT-------GHSAVVEDVAWHLLHES 240
Query: 118 LFVTGSYDHYVKVWDT--NCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175
LF + + D + +WDT N T + +S S ++A G+ D V L
Sbjct: 241 LFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSADKTVALW 300
Query: 176 DIASGAIS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234
D+ + + T H+D I V WS +E IL + G D + WD+ + G +QS
Sbjct: 301 DLRNLKLKLHTFESHKDEIFQVHWSPHNETILASSGTDRRLNVWDLSKIG----EEQSAE 356
Query: 235 QLGRRPPLL 243
PP L
Sbjct: 357 DAEDGPPEL 365
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 54/131 (41%), Gaps = 9/131 (6%)
Query: 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVY--RTAMSPLAA 158
GH+ W +G ++ S DH V +WD N ++ +A+ A
Sbjct: 174 GHQKEGYGLSWNSNLSGHLLSASDDHTVCLWDINAGPKEGKIVDAKAIFTGHSAVVEDVA 233
Query: 159 SHM----LIAAGTEDVQVRLCDIASGAISQT---LSGHRDGIMTVEWSTSSEWILVTGGC 211
H+ L + +D ++ + D S S+ + H + + ++ SE+IL TG
Sbjct: 234 WHLLHESLFGSVADDQKLMIWDTRSNTTSKPSHLVDAHTAEVNCLSFNPYSEFILATGSA 293
Query: 212 DGAIRFWDIRR 222
D + WD+R
Sbjct: 294 DKTVALWDLRN 304
Score = 32.7 bits (73), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 37/206 (17%), Positives = 79/206 (38%), Gaps = 32/206 (15%)
Query: 31 QLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS 90
++ + K I + H + + L E S A D + ++D + T +
Sbjct: 214 KIVDAKAIFTGHSAVVEDVAWHLLHESLFGSVADDQKLMIWDTRSNT---------TSKP 264
Query: 91 VFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--V 148
+VD H ++ + P + TGS D V +WD ++ ++ K +
Sbjct: 265 SHLVD-----AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHTFESHKDEI 319
Query: 149 YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG--------------IM 194
++ SP + +L ++GT D ++ + D++ Q+ DG I
Sbjct: 320 FQVHWSPHNET-ILASSGT-DRRLNVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKIS 377
Query: 195 TVEWSTSSEWILVTGGCDGAIRFWDI 220
W+ + W++ + D ++ W +
Sbjct: 378 DFSWNPNEPWVICSVSEDNIMQIWQM 403
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 164,591,678
Number of Sequences: 539616
Number of extensions: 6479316
Number of successful extensions: 29113
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 688
Number of HSP's successfully gapped in prelim test: 679
Number of HSP's that attempted gapping in prelim test: 17900
Number of HSP's gapped (non-prelim): 8847
length of query: 446
length of database: 191,569,459
effective HSP length: 121
effective length of query: 325
effective length of database: 126,275,923
effective search space: 41039674975
effective search space used: 41039674975
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)