Query 013274
Match_columns 446
No_of_seqs 185 out of 2329
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 07:30:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013274.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013274hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 3E-43 1E-47 332.9 39.1 288 39-426 28-320 (321)
2 1got_B GT-beta; complex (GTP-b 100.0 1.4E-42 4.6E-47 331.1 40.0 287 36-424 48-340 (340)
3 1vyh_C Platelet-activating fac 100.0 6E-43 2.1E-47 342.2 38.2 286 37-425 102-409 (410)
4 3frx_A Guanine nucleotide-bind 100.0 3.7E-42 1.3E-46 325.1 41.1 293 37-427 11-317 (319)
5 2pbi_B Guanine nucleotide-bind 100.0 6.7E-42 2.3E-46 328.1 39.1 289 36-424 57-354 (354)
6 3iz6_a 40S ribosomal protein R 100.0 2.4E-42 8E-47 334.6 32.3 295 37-429 60-377 (380)
7 4a11_B DNA excision repair pro 100.0 8E-41 2.7E-45 325.2 40.2 358 8-430 8-368 (408)
8 2xzm_R RACK1; ribosome, transl 100.0 7.9E-41 2.7E-45 319.2 38.2 296 37-427 15-340 (343)
9 2ynn_A Coatomer subunit beta'; 100.0 2.5E-40 8.6E-45 310.3 38.3 290 35-426 5-301 (304)
10 4gqb_B Methylosome protein 50; 100.0 6.2E-41 2.1E-45 319.8 34.3 296 40-428 27-332 (344)
11 4aow_A Guanine nucleotide-bind 100.0 5.4E-40 1.9E-44 311.7 40.3 296 36-428 31-338 (340)
12 4ery_A WD repeat-containing pr 100.0 1.3E-39 4.3E-44 306.4 41.7 290 37-426 17-311 (312)
13 4g56_B MGC81050 protein; prote 100.0 9.1E-41 3.1E-45 320.6 31.8 291 40-428 39-344 (357)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.4E-40 1.5E-44 314.4 36.2 298 38-429 10-337 (345)
15 4e54_B DNA damage-binding prot 100.0 3.5E-41 1.2E-45 332.3 28.7 299 38-429 114-432 (435)
16 1nr0_A Actin interacting prote 100.0 4.8E-40 1.7E-44 337.9 38.1 363 38-429 142-569 (611)
17 2hes_X YDR267CP; beta-propelle 100.0 1E-38 3.4E-43 303.0 40.9 293 38-427 9-328 (330)
18 1nr0_A Actin interacting prote 100.0 6.9E-39 2.3E-43 329.4 38.4 303 34-429 50-357 (611)
19 3dm0_A Maltose-binding peripla 100.0 9.1E-39 3.1E-43 333.4 38.6 294 37-427 376-693 (694)
20 3ei3_B DNA damage-binding prot 100.0 2.5E-38 8.4E-43 306.2 36.1 296 36-427 66-382 (383)
21 1erj_A Transcriptional repress 100.0 7.4E-38 2.5E-42 304.4 37.0 308 41-428 62-390 (393)
22 2ymu_A WD-40 repeat protein; u 100.0 3.3E-37 1.1E-41 314.3 39.1 318 38-424 257-577 (577)
23 3zwl_B Eukaryotic translation 100.0 7.4E-37 2.5E-41 292.9 39.3 286 39-428 28-347 (369)
24 2pm7_B Protein transport prote 100.0 4.3E-37 1.5E-41 287.3 34.5 258 38-426 4-284 (297)
25 2ynn_A Coatomer subunit beta'; 100.0 5.1E-37 1.8E-41 287.8 34.1 254 98-434 8-266 (304)
26 3gre_A Serine/threonine-protei 100.0 7.8E-37 2.7E-41 301.0 30.1 293 40-424 60-437 (437)
27 1sq9_A Antiviral protein SKI8; 100.0 2.6E-36 8.8E-41 292.9 33.0 300 36-428 9-396 (397)
28 3k26_A Polycomb protein EED; W 100.0 5.2E-36 1.8E-40 286.8 34.6 325 37-426 12-365 (366)
29 3bg1_A Protein SEC13 homolog; 100.0 2.4E-37 8.1E-42 291.7 23.4 259 36-426 6-292 (316)
30 4h5i_A Guanine nucleotide-exch 100.0 2.8E-36 9.5E-41 290.2 31.3 296 44-428 15-344 (365)
31 2j04_B YDR362CP, TAU91; beta p 100.0 7.4E-37 2.5E-41 306.5 26.4 299 39-428 203-518 (524)
32 3i2n_A WD repeat-containing pr 100.0 1.3E-35 4.5E-40 283.3 33.8 298 37-428 12-354 (357)
33 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-35 4.9E-40 284.8 34.1 307 38-427 3-361 (372)
34 2ymu_A WD-40 repeat protein; u 100.0 5E-35 1.7E-39 298.2 39.5 320 38-427 216-539 (577)
35 1vyh_C Platelet-activating fac 100.0 1.7E-35 5.8E-40 289.3 33.5 247 99-430 104-372 (410)
36 1gxr_A ESG1, transducin-like e 100.0 8.9E-35 3E-39 275.0 36.5 284 40-425 48-335 (337)
37 3ow8_A WD repeat-containing pr 100.0 1.5E-35 5.2E-40 280.0 31.0 246 100-429 29-281 (321)
38 3dwl_C Actin-related protein 2 100.0 1.5E-36 5.2E-41 292.8 24.5 309 37-425 5-377 (377)
39 3f3f_A Nucleoporin SEH1; struc 100.0 4.4E-35 1.5E-39 277.7 32.8 300 36-429 4-339 (351)
40 1r5m_A SIR4-interacting protei 100.0 7.4E-35 2.5E-39 284.4 34.8 280 42-427 107-425 (425)
41 4ggc_A P55CDC, cell division c 100.0 4.7E-34 1.6E-38 268.1 38.6 281 45-427 27-315 (318)
42 4gga_A P55CDC, cell division c 100.0 4.1E-34 1.4E-38 280.4 38.8 281 45-427 107-395 (420)
43 3sfz_A APAF-1, apoptotic pepti 100.0 1E-34 3.6E-39 321.5 38.7 372 37-429 609-1036(1249)
44 2pm9_A Protein WEB1, protein t 100.0 7.5E-36 2.6E-40 291.4 25.1 294 40-428 64-415 (416)
45 3odt_A Protein DOA1; ubiquitin 100.0 6.4E-34 2.2E-38 266.5 36.9 283 37-430 12-299 (313)
46 2oaj_A Protein SNI1; WD40 repe 100.0 1.7E-34 5.8E-39 308.0 35.3 168 39-231 13-191 (902)
47 2pm9_A Protein WEB1, protein t 100.0 7.9E-35 2.7E-39 284.1 29.0 299 42-430 11-340 (416)
48 3vl1_A 26S proteasome regulato 100.0 1E-33 3.6E-38 276.8 35.5 344 44-427 57-419 (420)
49 4gqb_B Methylosome protein 50; 100.0 9.1E-34 3.1E-38 270.2 32.9 248 41-387 80-333 (344)
50 1r5m_A SIR4-interacting protei 100.0 2.2E-33 7.4E-38 274.0 36.0 293 41-428 43-362 (425)
51 4aez_A CDC20, WD repeat-contai 100.0 3.4E-33 1.2E-37 272.1 34.8 282 41-429 89-382 (401)
52 4g56_B MGC81050 protein; prote 100.0 5.8E-34 2E-38 273.2 28.3 269 57-430 17-304 (357)
53 1got_B GT-beta; complex (GTP-b 100.0 5.6E-33 1.9E-37 264.5 34.1 246 99-430 51-304 (340)
54 1pgu_A Actin interacting prote 100.0 6.2E-33 2.1E-37 284.3 35.2 363 37-427 154-614 (615)
55 3v7d_B Cell division control p 100.0 1.4E-32 4.9E-37 272.6 36.7 279 38-425 157-461 (464)
56 3v7d_B Cell division control p 100.0 3.6E-32 1.2E-36 269.7 39.2 285 37-431 115-425 (464)
57 2j04_B YDR362CP, TAU91; beta p 100.0 2E-34 6.8E-39 288.8 22.8 250 42-429 132-430 (524)
58 1p22_A F-BOX/WD-repeat protein 100.0 1.7E-32 5.7E-37 270.1 35.2 272 40-428 130-415 (435)
59 2oaj_A Protein SNI1; WD40 repe 100.0 1.2E-32 4E-37 293.8 35.4 367 41-425 96-659 (902)
60 3sfz_A APAF-1, apoptotic pepti 100.0 6.3E-33 2.2E-37 307.3 34.5 367 38-435 652-1124(1249)
61 3jrp_A Fusion protein of prote 100.0 5.2E-33 1.8E-37 267.3 29.3 260 37-426 5-286 (379)
62 1yfq_A Cell cycle arrest prote 100.0 7.2E-33 2.5E-37 262.9 29.6 285 38-425 6-322 (342)
63 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.9E-31 6.6E-36 263.2 39.7 277 37-430 112-394 (445)
64 1gxr_A ESG1, transducin-like e 100.0 2.1E-32 7.2E-37 258.7 31.0 282 42-429 8-298 (337)
65 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.5E-32 1.5E-36 258.8 32.7 249 99-427 11-283 (345)
66 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.4E-31 8.3E-36 262.5 38.3 278 38-427 154-442 (445)
67 3mmy_A MRNA export factor; mRN 100.0 7.7E-32 2.6E-36 257.8 33.7 294 37-425 33-344 (368)
68 3mkq_A Coatomer beta'-subunit; 100.0 7.7E-32 2.6E-36 285.7 36.5 291 36-428 6-303 (814)
69 4ery_A WD repeat-containing pr 100.0 6.6E-32 2.2E-36 253.6 31.8 249 99-431 19-272 (312)
70 3iz6_a 40S ribosomal protein R 100.0 1.7E-32 5.8E-37 265.3 28.1 252 99-428 62-330 (380)
71 2pbi_B Guanine nucleotide-bind 100.0 1.3E-31 4.6E-36 256.5 33.8 246 99-429 60-317 (354)
72 1erj_A Transcriptional repress 100.0 8E-32 2.7E-36 261.8 32.1 246 101-430 62-344 (393)
73 2aq5_A Coronin-1A; WD40 repeat 100.0 2.4E-32 8.1E-37 266.1 28.3 290 44-428 35-343 (402)
74 2hes_X YDR267CP; beta-propelle 100.0 1.8E-31 6E-36 253.1 33.4 246 99-427 10-280 (330)
75 3dw8_B Serine/threonine-protei 100.0 5.5E-32 1.9E-36 266.7 30.8 303 41-425 26-444 (447)
76 3frx_A Guanine nucleotide-bind 100.0 1.9E-31 6.5E-36 251.6 33.0 244 98-428 12-268 (319)
77 2xyi_A Probable histone-bindin 100.0 1.6E-31 5.4E-36 262.8 30.6 275 39-429 124-412 (430)
78 2xzm_R RACK1; ribosome, transl 100.0 2E-30 6.8E-35 247.2 33.9 247 98-429 16-287 (343)
79 1pgu_A Actin interacting prote 100.0 1.6E-30 5.5E-35 266.4 34.7 294 36-426 56-365 (615)
80 2j04_A TAU60, YPL007P, hypothe 100.0 1.6E-31 5.3E-36 262.7 25.3 268 42-426 14-296 (588)
81 3jro_A Fusion protein of prote 100.0 2.3E-31 7.7E-36 279.7 26.8 261 37-427 3-285 (753)
82 3mkq_A Coatomer beta'-subunit; 100.0 9.2E-30 3.2E-34 269.8 36.6 286 38-426 50-385 (814)
83 4gq1_A NUP37; propeller, trans 100.0 2.9E-30 1E-34 250.7 28.9 261 108-420 93-383 (393)
84 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.5E-29 5.2E-34 250.1 34.4 299 43-426 4-390 (450)
85 3vu4_A KMHSV2; beta-propeller 100.0 7.9E-30 2.7E-34 244.3 29.5 251 40-428 16-272 (355)
86 2pm7_B Protein transport prote 100.0 5.7E-30 1.9E-34 239.0 27.4 210 100-427 6-238 (297)
87 2w18_A PALB2, fancn, partner a 100.0 7.9E-30 2.7E-34 236.0 25.4 193 115-425 144-355 (356)
88 3dm0_A Maltose-binding peripla 100.0 4.6E-29 1.6E-33 260.1 33.6 248 99-429 378-634 (694)
89 1sq9_A Antiviral protein SKI8; 100.0 2.8E-29 9.5E-34 243.4 29.8 260 98-429 11-324 (397)
90 3dw8_B Serine/threonine-protei 100.0 9.2E-30 3.2E-34 250.7 26.7 257 101-430 26-376 (447)
91 3k26_A Polycomb protein EED; W 100.0 1.5E-29 5.1E-34 241.9 27.1 254 100-429 15-320 (366)
92 3dwl_C Actin-related protein 2 100.0 3.6E-30 1.2E-34 248.1 20.2 245 102-426 10-280 (377)
93 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-29 5.9E-34 240.6 24.4 265 55-426 47-332 (343)
94 3i2n_A WD repeat-containing pr 100.0 3.8E-29 1.3E-33 238.4 26.9 251 100-428 15-292 (357)
95 3vl1_A 26S proteasome regulato 100.0 2.2E-29 7.6E-34 246.0 25.6 241 106-428 59-323 (420)
96 4aez_A CDC20, WD repeat-contai 100.0 5.5E-28 1.9E-32 235.3 35.2 250 40-392 131-387 (401)
97 3ei3_B DNA damage-binding prot 100.0 1.8E-28 6.3E-33 236.8 30.3 253 99-435 69-347 (383)
98 3gre_A Serine/threonine-protei 100.0 2.5E-29 8.5E-34 247.3 23.6 254 100-436 60-368 (437)
99 1l0q_A Surface layer protein; 100.0 1.7E-27 5.9E-32 230.5 35.4 268 57-429 3-277 (391)
100 1k8k_C P40, ARP2/3 complex 41 100.0 3.3E-28 1.1E-32 233.4 29.8 245 101-427 6-274 (372)
101 3bg1_A Protein SEC13 homolog; 100.0 1.1E-29 3.6E-34 239.3 18.8 211 99-427 9-247 (316)
102 3bws_A Protein LP49; two-domai 100.0 1.5E-27 5E-32 234.2 34.6 283 44-427 123-432 (433)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 3.5E-28 1.2E-32 236.7 29.4 260 38-388 76-345 (402)
104 1yfq_A Cell cycle arrest prote 100.0 1.7E-28 5.6E-33 232.8 26.2 252 100-430 8-285 (342)
105 3odt_A Protein DOA1; ubiquitin 100.0 2.2E-27 7.5E-32 221.9 31.7 240 99-431 14-259 (313)
106 4e54_B DNA damage-binding prot 100.0 1.8E-28 6.3E-33 241.3 24.5 268 39-388 160-433 (435)
107 3lrv_A PRE-mRNA-splicing facto 100.0 1.5E-28 5.2E-33 234.0 22.9 228 115-428 47-293 (343)
108 2j04_A TAU60, YPL007P, hypothe 100.0 3.8E-29 1.3E-33 245.8 18.3 245 41-416 83-350 (588)
109 3zwl_B Eukaryotic translation 100.0 3.6E-27 1.2E-31 225.4 31.5 257 99-430 28-307 (369)
110 4h5i_A Guanine nucleotide-exch 100.0 6.4E-28 2.2E-32 231.8 25.1 201 41-341 131-344 (365)
111 4gga_A P55CDC, cell division c 100.0 1.3E-26 4.5E-31 227.0 34.2 261 40-405 144-415 (420)
112 4aow_A Guanine nucleotide-bind 100.0 1.9E-26 6.4E-31 218.3 32.8 246 98-428 33-287 (340)
113 1p22_A F-BOX/WD-repeat protein 100.0 1.9E-26 6.6E-31 226.8 32.4 234 100-427 130-365 (435)
114 3jrp_A Fusion protein of prote 100.0 4.2E-27 1.4E-31 225.9 24.9 212 99-428 7-241 (379)
115 3vu4_A KMHSV2; beta-propeller 100.0 2E-26 6.7E-31 220.6 28.9 267 34-427 49-336 (355)
116 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-26 7.3E-31 217.7 27.7 267 38-342 52-339 (351)
117 3mmy_A MRNA export factor; mRN 100.0 1.6E-26 5.5E-31 220.8 27.1 246 99-430 35-307 (368)
118 1l0q_A Surface layer protein; 100.0 4.2E-25 1.4E-29 213.6 35.5 285 39-429 28-344 (391)
119 4gq1_A NUP37; propeller, trans 100.0 2.1E-26 7.2E-31 223.5 26.3 266 41-384 87-388 (393)
120 2xyi_A Probable histone-bindin 99.9 1.6E-25 5.4E-30 220.0 28.7 230 38-341 176-411 (430)
121 4a11_B DNA excision repair pro 99.9 3.7E-25 1.3E-29 214.5 29.6 287 41-426 97-404 (408)
122 2vdu_B TRNA (guanine-N(7)-)-me 99.9 3E-24 1E-28 212.1 32.0 274 40-385 99-391 (450)
123 3bws_A Protein LP49; two-domai 99.9 3.6E-24 1.2E-28 210.0 31.3 238 105-429 124-392 (433)
124 3jro_A Fusion protein of prote 99.9 1.5E-25 5.2E-30 235.4 22.2 212 99-428 5-239 (753)
125 4ggc_A P55CDC, cell division c 99.9 4.9E-24 1.7E-28 199.7 29.4 245 107-436 29-282 (318)
126 2w18_A PALB2, fancn, partner a 99.9 4.2E-25 1.4E-29 204.5 21.2 216 42-338 110-355 (356)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.1E-24 3.9E-29 212.7 25.5 289 42-433 61-393 (415)
128 1nir_A Nitrite reductase; hemo 99.9 7.6E-24 2.6E-28 213.5 31.1 283 51-430 145-461 (543)
129 1nir_A Nitrite reductase; hemo 99.9 8E-23 2.7E-27 206.1 35.1 296 46-436 181-523 (543)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.2E-22 1.4E-26 194.6 27.2 264 39-408 113-409 (415)
131 3u4y_A Uncharacterized protein 99.9 6.9E-21 2.4E-25 179.6 32.2 285 50-431 4-308 (331)
132 1ri6_A Putative isomerase YBHE 99.9 9.1E-21 3.1E-25 179.2 27.3 278 57-426 6-307 (343)
133 2ecf_A Dipeptidyl peptidase IV 99.9 9.6E-21 3.3E-25 198.6 29.0 324 43-426 36-412 (741)
134 1pby_B Quinohemoprotein amine 99.9 3.8E-20 1.3E-24 174.4 27.8 267 57-429 2-312 (337)
135 3vgz_A Uncharacterized protein 99.9 5.3E-19 1.8E-23 167.9 33.6 275 41-417 38-334 (353)
136 2ojh_A Uncharacterized protein 99.9 3E-20 1E-24 171.4 22.9 254 61-418 17-293 (297)
137 1xfd_A DIP, dipeptidyl aminope 99.9 2.7E-20 9.3E-25 194.6 23.1 316 44-426 17-392 (723)
138 1k32_A Tricorn protease; prote 99.9 2.2E-19 7.4E-24 195.3 29.4 280 42-429 294-639 (1045)
139 3o4h_A Acylamino-acid-releasin 99.8 7.9E-20 2.7E-24 186.4 23.9 269 43-427 21-315 (582)
140 2ecf_A Dipeptidyl peptidase IV 99.8 4.7E-19 1.6E-23 185.8 29.3 281 45-428 110-460 (741)
141 2z3z_A Dipeptidyl aminopeptida 99.8 3.2E-19 1.1E-23 186.0 27.2 328 45-430 27-394 (706)
142 2z3z_A Dipeptidyl aminopeptida 99.8 3.3E-19 1.1E-23 185.9 26.3 282 44-429 82-437 (706)
143 3hfq_A Uncharacterized protein 99.8 3.7E-18 1.3E-22 162.1 30.4 251 104-431 40-323 (347)
144 1ri6_A Putative isomerase YBHE 99.8 1.1E-17 3.6E-22 158.0 31.4 279 41-410 35-336 (343)
145 3u4y_A Uncharacterized protein 99.8 5.5E-18 1.9E-22 159.6 28.8 239 111-430 5-255 (331)
146 1k32_A Tricorn protease; prote 99.8 2.1E-18 7.2E-23 187.6 29.2 277 39-426 199-501 (1045)
147 3vgz_A Uncharacterized protein 99.8 1E-17 3.5E-22 159.0 28.4 243 105-429 42-305 (353)
148 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-17 4.2E-22 158.1 27.1 233 114-429 9-327 (349)
149 2oit_A Nucleoporin 214KDA; NH2 99.8 1.5E-18 5.2E-23 170.1 20.8 203 106-428 39-279 (434)
150 2ojh_A Uncharacterized protein 99.8 1.2E-17 4.2E-22 153.7 25.2 225 121-430 17-261 (297)
151 1xfd_A DIP, dipeptidyl aminope 99.8 8.6E-18 3E-22 175.6 26.9 283 36-418 50-432 (723)
152 2oit_A Nucleoporin 214KDA; NH2 99.8 2.7E-18 9.2E-23 168.3 21.5 171 43-221 36-222 (434)
153 3scy_A Hypothetical bacterial 99.8 1.3E-16 4.4E-21 152.4 31.2 251 104-431 50-343 (361)
154 3pe7_A Oligogalacturonate lyas 99.8 3.4E-17 1.2E-21 157.7 24.0 287 39-426 26-381 (388)
155 1pby_B Quinohemoprotein amine 99.8 5.1E-17 1.7E-21 152.9 22.8 224 117-429 2-271 (337)
156 3o4h_A Acylamino-acid-releasin 99.8 1.8E-17 6.1E-22 169.0 21.0 231 103-425 21-274 (582)
157 3scy_A Hypothetical bacterial 99.8 1.3E-15 4.6E-20 145.3 32.7 271 42-405 48-360 (361)
158 1z68_A Fibroblast activation p 99.8 6.7E-18 2.3E-22 176.4 17.9 316 47-426 19-390 (719)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.9E-16 1.7E-20 148.8 28.9 247 105-428 41-342 (365)
160 3hfq_A Uncharacterized protein 99.7 2.5E-15 8.6E-20 142.5 31.5 261 41-389 37-323 (347)
161 1z68_A Fibroblast activation p 99.7 1.3E-16 4.4E-21 166.7 20.8 290 37-429 50-445 (719)
162 1q7f_A NHL, brain tumor CG1071 99.7 5E-14 1.7E-18 129.7 33.1 251 40-429 26-282 (286)
163 3fvz_A Peptidyl-glycine alpha- 99.7 3.1E-14 1.1E-18 134.2 28.0 246 43-428 23-323 (329)
164 1jmx_B Amine dehydrogenase; ox 99.7 1.4E-14 4.8E-19 136.9 24.9 299 49-395 5-335 (349)
165 4a5s_A Dipeptidyl peptidase 4 99.7 4.5E-15 1.5E-19 155.5 23.2 290 44-437 17-363 (740)
166 2oiz_A Aromatic amine dehydrog 99.7 2.9E-14 1E-18 136.2 25.8 266 64-428 29-335 (361)
167 1jof_A Carboxy-CIS,CIS-muconat 99.6 1.5E-13 5E-18 131.5 27.7 257 42-386 38-342 (365)
168 3azo_A Aminopeptidase; POP fam 99.6 1.4E-13 4.9E-18 142.1 27.9 290 39-429 19-371 (662)
169 3c5m_A Oligogalacturonate lyas 99.6 2.6E-14 9E-19 137.6 20.8 278 44-426 36-381 (396)
170 3dsm_A Uncharacterized protein 99.6 1.4E-12 4.7E-17 122.8 26.7 274 64-437 15-312 (328)
171 2dg1_A DRP35, lactonase; beta 99.6 1.3E-12 4.6E-17 122.9 26.0 270 43-417 5-300 (333)
172 4a5s_A Dipeptidyl peptidase 4 99.6 6.7E-13 2.3E-17 139.0 26.0 164 36-224 49-296 (740)
173 2oiz_A Aromatic amine dehydrog 99.5 5.5E-12 1.9E-16 120.4 28.2 280 40-409 48-360 (361)
174 3azo_A Aminopeptidase; POP fam 99.5 8.7E-13 3E-17 136.3 23.6 113 102-219 128-269 (662)
175 1qks_A Cytochrome CD1 nitrite 99.5 5.1E-11 1.7E-15 119.9 35.5 298 45-436 198-547 (567)
176 1qks_A Cytochrome CD1 nitrite 99.5 7.9E-11 2.7E-15 118.5 33.9 276 55-428 166-478 (567)
177 3e5z_A Putative gluconolactona 99.5 1.8E-11 6.1E-16 113.2 26.8 229 106-421 30-281 (296)
178 3pe7_A Oligogalacturonate lyas 99.5 1.1E-12 3.7E-17 126.1 18.9 235 109-430 41-332 (388)
179 2gop_A Trilobed protease; beta 99.5 2.8E-11 9.5E-16 114.3 28.3 257 44-426 15-330 (347)
180 2xdw_A Prolyl endopeptidase; a 99.5 3.2E-11 1.1E-15 125.7 30.9 247 100-429 121-416 (710)
181 2z2n_A Virginiamycin B lyase; 99.5 8.2E-10 2.8E-14 101.5 35.8 279 41-428 12-296 (299)
182 2bkl_A Prolyl endopeptidase; m 99.5 9.3E-12 3.2E-16 129.4 24.5 245 100-429 117-399 (695)
183 3no2_A Uncharacterized protein 99.4 1.3E-10 4.3E-15 106.4 28.4 216 116-415 5-231 (276)
184 3dsm_A Uncharacterized protein 99.4 2.7E-10 9.1E-15 107.1 27.7 253 45-405 45-320 (328)
185 3fvz_A Peptidyl-glycine alpha- 99.4 9.9E-11 3.4E-15 110.1 24.2 210 41-340 88-322 (329)
186 2mad_H Methylamine dehydrogena 99.4 3.2E-09 1.1E-13 101.5 33.7 242 108-431 70-354 (373)
187 1q7f_A NHL, brain tumor CG1071 99.4 5.4E-10 1.8E-14 102.5 27.5 203 101-428 27-239 (286)
188 1rwi_B Serine/threonine-protei 99.4 1.6E-10 5.6E-15 104.9 23.3 238 105-429 25-266 (270)
189 2xdw_A Prolyl endopeptidase; a 99.4 1.2E-10 4.1E-15 121.3 24.6 159 41-223 122-321 (710)
190 3e5z_A Putative gluconolactona 99.3 1E-09 3.5E-14 101.3 28.0 242 39-387 23-288 (296)
191 3c5m_A Oligogalacturonate lyas 99.3 9.6E-12 3.3E-16 119.5 14.3 262 106-431 38-333 (396)
192 3no2_A Uncharacterized protein 99.3 5.3E-10 1.8E-14 102.3 24.7 144 56-226 5-158 (276)
193 2dg1_A DRP35, lactonase; beta 99.3 2.8E-10 9.6E-15 106.8 23.5 228 115-429 16-265 (333)
194 2bkl_A Prolyl endopeptidase; m 99.3 9.2E-11 3.1E-15 121.9 21.6 158 41-223 118-305 (695)
195 1yr2_A Prolyl oligopeptidase; 99.3 1E-09 3.4E-14 114.9 29.4 242 101-429 160-443 (741)
196 2gop_A Trilobed protease; beta 99.3 4.8E-10 1.6E-14 105.8 23.9 200 125-426 42-290 (347)
197 3sjl_D Methylamine dehydrogena 99.3 5.9E-10 2E-14 105.7 22.9 276 53-429 42-365 (386)
198 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 4E-09 1.4E-13 97.8 27.5 237 107-427 21-299 (314)
199 2qc5_A Streptogramin B lactona 99.3 2.3E-08 7.8E-13 91.8 31.5 276 42-426 18-299 (300)
200 2z2n_A Virginiamycin B lyase; 99.2 2.8E-08 9.6E-13 91.1 30.4 234 104-426 15-254 (299)
201 1xip_A Nucleoporin NUP159; bet 99.2 5.2E-10 1.8E-14 106.5 18.5 106 106-223 40-156 (388)
202 3g4e_A Regucalcin; six bladed 99.2 2.9E-08 9.9E-13 91.6 29.8 224 108-414 17-259 (297)
203 3c75_H MADH, methylamine dehyd 99.2 3.7E-09 1.3E-13 102.0 23.5 274 58-431 87-406 (426)
204 2qe8_A Uncharacterized protein 99.2 3.7E-09 1.3E-13 99.9 23.2 273 44-424 17-318 (343)
205 3hrp_A Uncharacterized protein 99.2 9.6E-09 3.3E-13 99.5 26.5 243 105-426 132-409 (409)
206 1rwi_B Serine/threonine-protei 99.1 1.5E-08 5E-13 91.8 23.8 238 45-387 25-266 (270)
207 2ghs_A AGR_C_1268P; regucalcin 99.1 2.9E-07 1E-11 86.1 32.3 150 44-221 49-209 (326)
208 3iuj_A Prolyl endopeptidase; h 99.1 1.4E-08 4.9E-13 105.2 25.3 158 41-222 126-314 (693)
209 1xip_A Nucleoporin NUP159; bet 99.1 4E-09 1.4E-13 100.4 18.3 154 45-224 39-193 (388)
210 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2E-07 7E-12 86.1 29.2 245 44-384 18-298 (314)
211 3dr2_A Exported gluconolactona 99.0 3E-07 1E-11 85.0 28.6 224 108-422 49-302 (305)
212 3g4e_A Regucalcin; six bladed 99.0 5.1E-07 1.8E-11 83.2 28.7 236 38-373 7-259 (297)
213 1yr2_A Prolyl oligopeptidase; 99.0 3.5E-08 1.2E-12 103.2 22.9 157 41-222 160-350 (741)
214 2qc5_A Streptogramin B lactona 99.0 6.3E-07 2.2E-11 82.0 29.0 234 105-427 21-260 (300)
215 1mda_H Methylamine dehydrogena 99.0 5.7E-08 1.9E-12 92.1 20.4 282 118-441 34-361 (368)
216 3hrp_A Uncharacterized protein 98.9 6.9E-07 2.4E-11 86.4 27.9 155 44-222 131-298 (409)
217 1kb0_A Quinohemoprotein alcoho 98.9 3.9E-07 1.4E-11 93.9 25.8 53 376-429 457-509 (677)
218 1yiq_A Quinohemoprotein alcoho 98.9 1.4E-06 4.7E-11 90.1 29.1 53 376-429 455-507 (689)
219 2hz6_A Endoplasmic reticulum t 98.9 5.2E-10 1.8E-14 106.9 2.2 144 56-225 9-152 (369)
220 2hz6_A Endoplasmic reticulum t 98.8 7.1E-09 2.4E-13 99.0 8.2 204 115-410 8-217 (369)
221 3iuj_A Prolyl endopeptidase; h 98.8 6.3E-07 2.2E-11 92.9 22.1 118 100-223 125-269 (693)
222 2qe8_A Uncharacterized protein 98.8 2.2E-07 7.6E-12 87.6 17.0 224 105-426 18-277 (343)
223 2mad_H Methylamine dehydrogena 98.8 6.3E-05 2.2E-09 71.5 34.0 254 47-392 69-357 (373)
224 3q7m_A Lipoprotein YFGL, BAMB; 98.7 2.2E-05 7.4E-10 74.7 29.1 278 57-429 54-339 (376)
225 2ghs_A AGR_C_1268P; regucalcin 98.7 8E-06 2.7E-10 76.2 25.3 94 109-209 54-151 (326)
226 2ece_A 462AA long hypothetical 98.7 1.3E-05 4.3E-10 76.8 26.4 221 116-415 96-399 (462)
227 1kb0_A Quinohemoprotein alcoho 98.7 1.1E-05 3.8E-10 83.0 28.2 92 331-427 457-567 (677)
228 3sjl_D Methylamine dehydrogena 98.6 9E-06 3.1E-10 77.0 23.3 114 113-229 41-176 (386)
229 3q7m_A Lipoprotein YFGL, BAMB; 98.6 3.3E-05 1.1E-09 73.3 25.8 257 57-424 104-375 (376)
230 1yiq_A Quinohemoprotein alcoho 98.5 4.4E-05 1.5E-09 78.7 27.6 79 330-413 454-534 (689)
231 1kv9_A Type II quinohemoprotei 98.5 5.2E-05 1.8E-09 77.9 27.5 71 116-187 117-195 (668)
232 3dr2_A Exported gluconolactona 98.5 1E-05 3.5E-10 74.7 20.0 164 182-427 36-224 (305)
233 1fwx_A Nitrous oxide reductase 98.5 1.1E-05 3.6E-10 80.0 20.0 247 115-414 100-405 (595)
234 3nol_A Glutamine cyclotransfer 98.5 3.7E-05 1.3E-09 68.2 21.4 113 110-229 48-162 (262)
235 3c75_H MADH, methylamine dehyd 98.4 0.00018 6E-09 69.3 26.5 269 48-407 122-423 (426)
236 3hxj_A Pyrrolo-quinoline quino 98.4 0.00021 7.1E-09 66.1 25.3 218 116-428 107-325 (330)
237 2ece_A 462AA long hypothetical 98.4 6.2E-05 2.1E-09 72.0 21.2 189 159-426 95-351 (462)
238 2iwa_A Glutamine cyclotransfer 98.3 0.00026 8.7E-09 63.4 24.0 197 107-385 24-237 (266)
239 2iwa_A Glutamine cyclotransfer 98.3 0.00041 1.4E-08 62.1 25.1 205 137-427 10-237 (266)
240 3nok_A Glutaminyl cyclase; bet 98.3 0.00017 5.7E-09 64.0 21.0 170 160-415 65-254 (268)
241 3hxj_A Pyrrolo-quinoline quino 98.3 2.6E-05 8.7E-10 72.4 16.6 261 48-428 24-285 (330)
242 3mbr_X Glutamine cyclotransfer 98.3 0.00039 1.3E-08 61.1 22.6 109 115-229 30-140 (243)
243 1npe_A Nidogen, entactin; glyc 98.3 0.0019 6.4E-08 57.9 28.2 219 106-409 38-263 (267)
244 1mda_H Methylamine dehydrogena 98.2 4E-05 1.4E-09 72.5 16.9 287 56-406 32-366 (368)
245 3nok_A Glutaminyl cyclase; bet 98.2 0.00041 1.4E-08 61.5 20.9 108 115-229 64-171 (268)
246 1npe_A Nidogen, entactin; glyc 98.1 0.0056 1.9E-07 54.7 27.2 159 44-222 36-198 (267)
247 2ad6_A Methanol dehydrogenase 98.1 0.0027 9.4E-08 63.8 27.3 73 116-188 115-194 (571)
248 3nol_A Glutamine cyclotransfer 98.0 0.0024 8.2E-08 56.6 23.1 163 41-230 38-209 (262)
249 1fwx_A Nitrous oxide reductase 98.0 0.0024 8.2E-08 63.3 25.3 102 317-427 244-361 (595)
250 2p4o_A Hypothetical protein; p 98.0 0.0067 2.3E-07 55.5 25.8 152 44-221 32-197 (306)
251 2ad6_A Methanol dehydrogenase 97.9 0.0088 3E-07 60.1 28.5 58 171-229 273-342 (571)
252 1k3i_A Galactose oxidase precu 97.9 0.00092 3.2E-08 68.5 20.4 81 41-139 240-327 (656)
253 1w6s_A Methanol dehydrogenase 97.9 0.0054 1.8E-07 61.8 25.5 69 119-188 124-200 (599)
254 2fp8_A Strictosidine synthase; 97.8 0.012 4.2E-07 54.1 25.5 110 312-427 187-313 (322)
255 1flg_A Protein (quinoprotein e 97.8 0.0077 2.6E-07 60.6 25.5 72 116-187 117-201 (582)
256 3v65_B Low-density lipoprotein 97.8 0.025 8.5E-07 53.7 27.1 220 124-426 94-317 (386)
257 3tc9_A Hypothetical hydrolase; 97.7 0.041 1.4E-06 53.1 27.9 112 107-222 140-257 (430)
258 3mbr_X Glutamine cyclotransfer 97.7 0.023 7.9E-07 49.8 26.7 163 41-230 16-187 (243)
259 1kv9_A Type II quinohemoprotei 97.6 0.0025 8.5E-08 65.4 19.0 74 114-187 239-341 (668)
260 4a2l_A BT_4663, two-component 97.5 0.12 4.2E-06 53.9 37.8 283 46-429 175-482 (795)
261 3v64_C Agrin; beta propeller, 97.5 0.072 2.5E-06 49.7 29.4 219 125-426 52-274 (349)
262 3v65_B Low-density lipoprotein 97.4 0.09 3.1E-06 49.8 26.3 114 106-221 118-233 (386)
263 4a2l_A BT_4663, two-component 97.4 0.17 5.9E-06 52.8 36.1 283 44-428 263-572 (795)
264 4hw6_A Hypothetical protein, I 97.4 0.11 3.8E-06 50.0 26.8 241 106-426 141-432 (433)
265 3v64_C Agrin; beta propeller, 97.4 0.085 2.9E-06 49.2 24.2 114 106-221 75-190 (349)
266 2p4o_A Hypothetical protein; p 97.3 0.099 3.4E-06 47.6 24.7 110 316-428 123-243 (306)
267 1w6s_A Methanol dehydrogenase 97.2 0.21 7.3E-06 50.2 29.1 59 170-229 278-349 (599)
268 3sov_A LRP-6, low-density lipo 97.1 0.16 5.4E-06 46.6 23.0 114 106-221 37-153 (318)
269 3kya_A Putative phosphatase; s 97.1 0.23 8E-06 48.3 27.0 112 107-221 142-277 (496)
270 3m0c_C LDL receptor, low-densi 97.0 0.32 1.1E-05 50.5 25.8 114 106-221 426-545 (791)
271 1k3i_A Galactose oxidase precu 96.9 0.09 3.1E-06 53.7 21.2 64 159-223 197-275 (656)
272 2fp8_A Strictosidine synthase; 96.9 0.24 8.1E-06 45.3 24.1 112 312-429 128-271 (322)
273 1ijq_A LDL receptor, low-densi 96.9 0.24 8.2E-06 45.3 26.8 114 106-221 32-151 (316)
274 1ijq_A LDL receptor, low-densi 96.9 0.24 8.3E-06 45.3 30.3 219 126-428 10-239 (316)
275 3amr_A 3-phytase; beta-propell 96.8 0.31 1E-05 45.0 23.9 112 313-426 131-262 (355)
276 1flg_A Protein (quinoprotein e 96.8 0.5 1.7E-05 47.4 30.0 79 329-412 464-544 (582)
277 2xe4_A Oligopeptidase B; hydro 96.7 0.067 2.3E-06 55.6 18.5 119 100-222 169-304 (751)
278 3v9f_A Two-component system se 96.7 0.78 2.7E-05 47.7 33.4 286 44-428 211-525 (781)
279 1n7d_A LDL receptor, low-densi 96.7 0.0052 1.8E-07 63.3 9.4 92 312-407 542-636 (699)
280 2xe4_A Oligopeptidase B; hydro 96.6 0.29 9.9E-06 50.8 22.1 144 45-212 175-340 (751)
281 3p5b_L Low density lipoprotein 96.5 0.61 2.1E-05 44.2 31.1 220 105-405 113-340 (400)
282 3sov_A LRP-6, low-density lipo 96.4 0.57 2E-05 42.9 27.0 221 125-429 12-240 (318)
283 1n7d_A LDL receptor, low-densi 96.2 0.035 1.2E-06 57.1 12.5 96 125-222 385-484 (699)
284 3p5b_L Low density lipoprotein 96.2 0.86 3E-05 43.2 31.0 220 125-428 91-321 (400)
285 2xzh_A Clathrin heavy chain 1; 96.1 0.82 2.8E-05 41.7 25.1 106 110-222 73-189 (365)
286 3m0c_C LDL receptor, low-densi 96.1 1.7 5.8E-05 45.2 29.8 219 124-426 402-631 (791)
287 4a0p_A LRP6, LRP-6, low-densit 96.1 1.5 5E-05 44.4 28.5 220 124-428 13-238 (628)
288 3tc9_A Hypothetical hydrolase; 96.0 0.37 1.3E-05 46.3 18.1 112 312-427 181-301 (430)
289 3v9f_A Two-component system se 96.0 1.8 6.2E-05 44.9 33.1 291 44-429 258-570 (781)
290 3qqz_A Putative uncharacterize 96.0 0.78 2.7E-05 40.4 25.3 118 99-221 22-150 (255)
291 2p9w_A MAL S 1 allergenic prot 95.7 1.1 3.7E-05 41.0 18.6 112 108-221 17-167 (334)
292 4hw6_A Hypothetical protein, I 95.6 1.6 5.6E-05 41.7 21.5 114 312-427 230-374 (433)
293 3amr_A 3-phytase; beta-propell 95.3 1.8 6.1E-05 39.9 20.1 112 115-229 141-271 (355)
294 3s94_A LRP-6, low-density lipo 95.2 2.9 0.0001 42.1 23.6 102 106-209 42-145 (619)
295 2p9w_A MAL S 1 allergenic prot 95.0 2.1 7.2E-05 39.1 18.7 163 44-221 13-214 (334)
296 3kya_A Putative phosphatase; s 94.6 1.7 5.7E-05 42.3 17.3 159 46-221 141-340 (496)
297 1bpo_A Protein (clathrin); cla 94.1 4.1 0.00014 38.7 26.7 106 109-222 71-188 (494)
298 2vpj_A Kelch-like protein 12; 94.1 3.1 0.00011 37.1 21.3 103 320-428 159-279 (301)
299 1xi4_A Clathrin heavy chain; a 93.7 3.9 0.00013 44.9 18.9 91 125-221 85-187 (1630)
300 2ism_A Putative oxidoreductase 92.5 1.3 4.3E-05 41.2 12.1 111 312-427 33-178 (352)
301 3ii7_A Kelch-like protein 7; p 92.0 6.3 0.00022 35.1 18.0 106 55-182 55-181 (306)
302 2xbg_A YCF48-like protein; pho 91.7 7.5 0.00026 35.3 17.9 156 36-219 155-319 (327)
303 3ii7_A Kelch-like protein 7; p 91.5 7.3 0.00025 34.7 20.7 99 117-222 13-127 (306)
304 3qqz_A Putative uncharacterize 91.3 7 0.00024 34.2 21.5 168 185-429 21-206 (255)
305 2vpj_A Kelch-like protein 12; 90.9 5.8 0.0002 35.3 14.5 144 55-223 112-279 (301)
306 3sre_A PON1, serum paraoxonase 90.6 10 0.00036 35.0 19.0 114 312-426 114-251 (355)
307 3s94_A LRP-6, low-density lipo 90.3 16 0.00055 36.6 37.2 165 44-229 84-250 (619)
308 2xn4_A Kelch-like protein 2; s 89.6 11 0.00037 33.5 21.0 104 320-429 155-278 (302)
309 2xn4_A Kelch-like protein 2; s 89.3 4.2 0.00015 36.2 12.1 144 55-223 108-277 (302)
310 3pbp_A Nucleoporin NUP82; beta 89.1 15 0.00051 34.8 15.5 107 317-428 28-159 (452)
311 3a9g_A Putative uncharacterize 88.9 3.5 0.00012 38.2 11.5 103 311-415 30-153 (354)
312 4a0p_A LRP6, LRP-6, low-densit 87.8 24 0.00083 35.4 41.0 164 44-229 80-244 (628)
313 2be1_A Serine/threonine-protei 86.3 3.4 0.00012 38.0 9.4 112 117-230 11-138 (339)
314 4asc_A Kelch repeat and BTB do 86.2 18 0.00062 32.3 16.5 58 118-182 7-79 (315)
315 1zgk_A Kelch-like ECH-associat 86.2 18 0.00061 32.2 18.3 103 320-428 168-288 (308)
316 3das_A Putative oxidoreductase 85.3 7.7 0.00026 35.7 11.3 103 311-415 33-158 (347)
317 1zgk_A Kelch-like ECH-associat 84.6 10 0.00035 33.8 11.9 144 55-223 121-288 (308)
318 1cru_A Protein (soluble quinop 84.5 10 0.00035 36.3 12.3 106 311-416 28-163 (454)
319 3pbp_A Nucleoporin NUP82; beta 82.7 33 0.0011 32.5 19.3 94 106-201 68-190 (452)
320 4gq2_M Nucleoporin NUP120; bet 82.3 33 0.0011 36.3 16.1 39 105-144 237-275 (950)
321 4asc_A Kelch repeat and BTB do 81.7 13 0.00044 33.3 11.3 64 115-182 148-224 (315)
322 2woz_A Kelch repeat and BTB do 79.3 21 0.00071 31.9 11.9 102 115-223 158-288 (318)
323 2woz_A Kelch repeat and BTB do 79.2 28 0.00097 31.0 12.8 103 115-222 109-231 (318)
324 2be1_A Serine/threonine-protei 76.5 14 0.00047 33.9 9.6 118 57-188 11-139 (339)
325 2g8s_A Glucose/sorbosone dehyd 75.8 17 0.00059 33.3 10.3 115 311-428 19-174 (353)
326 2uvk_A YJHT; unknown function, 73.1 38 0.0013 30.7 12.0 51 171-224 286-344 (357)
327 2xbg_A YCF48-like protein; pho 72.4 54 0.0019 29.4 35.5 112 311-426 206-321 (327)
328 2ism_A Putative oxidoreductase 71.7 60 0.002 29.6 25.1 98 108-210 35-153 (352)
329 2zwa_A Leucine carboxyl methyl 70.9 81 0.0028 31.9 14.8 156 55-223 397-578 (695)
330 2uvk_A YJHT; unknown function, 68.5 68 0.0023 28.9 18.4 64 115-182 19-98 (357)
331 2zwa_A Leucine carboxyl methyl 60.7 53 0.0018 33.3 11.0 148 55-223 451-636 (695)
332 3sbq_A Nitrous-oxide reductase 60.5 46 0.0016 32.8 9.7 103 312-414 325-452 (638)
333 2wg3_C Hedgehog-interacting pr 59.8 51 0.0017 31.6 10.1 27 312-339 16-44 (463)
334 3f7f_A Nucleoporin NUP120; nuc 58.8 18 0.00061 36.7 6.8 30 115-144 230-259 (729)
335 3sre_A PON1, serum paraoxonase 54.9 1.3E+02 0.0044 27.6 21.7 50 170-222 203-252 (355)
336 1cru_A Protein (soluble quinop 54.3 1.5E+02 0.0051 28.1 21.3 30 191-221 27-56 (454)
337 4gq2_M Nucleoporin NUP120; bet 51.0 24 0.00083 37.4 6.7 38 192-230 237-274 (950)
338 2g8s_A Glucose/sorbosone dehyd 48.7 1.5E+02 0.0053 26.7 18.5 29 191-220 18-46 (353)
339 4fhn_B Nucleoporin NUP120; pro 46.3 17 0.00059 39.4 4.8 31 115-145 248-278 (1139)
340 3sbq_A Nitrous-oxide reductase 43.3 65 0.0022 31.8 7.6 50 172-222 300-354 (638)
341 1bpo_A Protein (clathrin); cla 42.9 2.3E+02 0.0078 27.0 16.7 58 162-220 272-329 (494)
342 1tl2_A L10, protein (tachylect 41.2 44 0.0015 28.5 5.5 28 399-428 90-117 (236)
343 3ei3_A DNA damage-binding prot 40.8 3.8E+02 0.013 29.0 34.5 60 163-223 526-592 (1158)
344 4fhn_B Nucleoporin NUP120; pro 39.2 26 0.0009 38.0 4.9 38 193-231 240-277 (1139)
345 3das_A Putative oxidoreductase 36.4 2.5E+02 0.0084 25.5 28.4 31 44-75 32-62 (347)
346 3f7f_A Nucleoporin NUP120; nuc 36.1 47 0.0016 33.7 5.7 36 192-230 223-258 (729)
347 4a9v_A PHOX; hydrolase, beta-p 34.2 1.1E+02 0.0039 30.1 7.9 57 357-413 477-547 (592)
348 2xzh_A Clathrin heavy chain 1; 27.3 3.6E+02 0.012 24.6 23.4 89 124-222 47-135 (365)
349 1xi4_A Clathrin heavy chain; a 26.8 1.5E+02 0.005 33.1 7.8 107 317-430 73-191 (1630)
350 3zwu_A Alkaline phosphatase PH 22.9 5.5E+02 0.019 25.3 12.8 56 358-413 478-547 (592)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3e-43 Score=332.88 Aligned_cols=288 Identities=20% Similarity=0.309 Sum_probs=239.9
Q ss_pred eCCCccceeEEEeecC---CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 39 VSPHKGSINSLQVDLT---EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~---~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
..+|.+.|++|+|+++ ++.+|+|||.|++|+|||+.+.... ......||...|.++.+.+ +
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~---------------~~~~l~gh~~~v~~~~~~~-~ 91 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD---------------LQWSLEGHQLGVVSVDISH-T 91 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---------------EEEEECCCSSCEEEEEECS-S
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---------------eeeeeccCCCCEEEEEECC-C
Confidence 4689999999999864 3679999999999999998653210 0123468999999999887 6
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
+.+++|++.|++|++||+.+++.+..+.. ...+..++++|. ..+|++|+.|+.|++||+++++....+..|...|.
T Consensus 92 ~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spd---g~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~ 168 (321)
T 3ow8_A 92 LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD---SQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFIL 168 (321)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTT---SSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEE
T ss_pred CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCC---CCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEE
Confidence 78999999999999999999998877764 334566777774 45899999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
+++|+|++++ |++|+.||.|++||+++++++..+
T Consensus 169 ~~~~spdg~~-lasg~~dg~i~iwd~~~~~~~~~~--------------------------------------------- 202 (321)
T 3ow8_A 169 SIAYSPDGKY-LASGAIDGIINIFDIATGKLLHTL--------------------------------------------- 202 (321)
T ss_dssp EEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEE---------------------------------------------
T ss_pred EEEECCCCCE-EEEEcCCCeEEEEECCCCcEEEEE---------------------------------------------
Confidence 9999999985 789999999999999876543322
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
.+|..+|++++|+|++++|++|+.|++|++||+.++... ..+..+
T Consensus 203 -------------------------------~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~----~~~~~h 247 (321)
T 3ow8_A 203 -------------------------------EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA----GTLSGH 247 (321)
T ss_dssp -------------------------------CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE----EEECCC
T ss_pred -------------------------------cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee----EEEcCC
Confidence 256678999999999999999999999999999876432 122233
Q ss_pred cCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 355 TSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
......++++|++..+++++. ..+++||+.+++.+.++.+|.+.|++++|+||+++|+|++.|++|+||+.+
T Consensus 248 ~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 248 ASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred CCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 445667899999988887654 689999999999999999999999999999999999999999999999864
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-42 Score=331.07 Aligned_cols=287 Identities=16% Similarity=0.340 Sum_probs=234.9
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
...+.+|.+.|++++|+| ++++|+|||.||+|+|||+.++... .....|...|.++.++| +
T Consensus 48 ~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~-----------------~~~~~~~~~v~~~~~s~-~ 108 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKV-----------------HAIPLRSSWVMTCAYAP-S 108 (340)
T ss_dssp EEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEE-----------------EEEECSSSCEEEEEECT-T
T ss_pred heeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcc-----------------eEeecCCccEEEEEECC-C
Confidence 345789999999999996 6889999999999999998765321 11246888899998887 7
Q ss_pred CcEEEEEeCCCeEEEEECCCCe----eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTR----VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~ 190 (446)
+.+|++|+.|+.|++||+.+.. ....+. +.+.+.++.+.+.. .+++++.|+.|++||++++..+..+.+|.
T Consensus 109 ~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~----~l~s~s~d~~i~~wd~~~~~~~~~~~~h~ 184 (340)
T 1got_B 109 GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN----QIVTSSGDTTCALWDIETGQQTTTFTGHT 184 (340)
T ss_dssp SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT----EEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC----cEEEEECCCcEEEEECCCCcEEEEEcCCC
Confidence 8899999999999999998753 223332 34556677776532 48899999999999999999999999999
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
+.|.+++|+|+++ +|++|+.|++|++||++++.+...+
T Consensus 185 ~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~~~~~~~----------------------------------------- 222 (340)
T 1got_B 185 GDVMSLSLAPDTR-LFVSGACDASAKLWDVREGMCRQTF----------------------------------------- 222 (340)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEE-----------------------------------------
T ss_pred CceEEEEECCCCC-EEEEEeCCCcEEEEECCCCeeEEEE-----------------------------------------
Confidence 9999999999987 4799999999999999876543222
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
.+|...|++++|+|+|.+|++|+.|++|++||+.+++... .+..
T Consensus 223 -----------------------------------~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~-~~~~ 266 (340)
T 1got_B 223 -----------------------------------TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM-TYSH 266 (340)
T ss_dssp -----------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-EECC
T ss_pred -----------------------------------cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE-EEcc
Confidence 3567789999999999999999999999999998764321 1110
Q ss_pred EEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeC
Q 013274 351 VRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWC 424 (446)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~ 424 (446)
.........++++|++.++++++. ..+++||+.+++....+.+|.+.|++++|+||+++|+|||.|++|+||+
T Consensus 267 -~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 267 -DNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp -TTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred -CCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 001123456889999998888765 5799999999999999999999999999999999999999999999996
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6e-43 Score=342.16 Aligned_cols=286 Identities=18% Similarity=0.304 Sum_probs=238.2
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|.+.|++++|+| ++.+|+|||.||+|+|||+.++... ....+|...|.++.|+| ++
T Consensus 102 ~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~-----------------~~l~~h~~~V~~v~~~~-~~ 162 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFE-----------------RTLKGHTDSVQDISFDH-SG 162 (410)
T ss_dssp CEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCC-----------------EEECCCSSCEEEEEECT-TS
T ss_pred EeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEE-----------------EEEeccCCcEEEEEEcC-CC
Confidence 34678999999999997 5789999999999999999876421 12358999999999986 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s 195 (446)
.+|+||+.|++|++||+.+++++..+. +.+.+.++.++|. ..+|++|+.|+.|++||++++.++..+.+|...|.+
T Consensus 163 ~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~---~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~ 239 (410)
T 1vyh_C 163 KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN---GDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRM 239 (410)
T ss_dssp SEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC---CCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEE
Confidence 899999999999999999988877665 3456888888874 358999999999999999999999999999999999
Q ss_pred EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+.|+|++.. |++|+.|++|++||++++.+...+.
T Consensus 240 ~~~~~~g~~-l~s~s~D~~v~vwd~~~~~~~~~~~--------------------------------------------- 273 (410)
T 1vyh_C 240 VRPNQDGTL-IASCSNDQTVRVWVVATKECKAELR--------------------------------------------- 273 (410)
T ss_dssp EEECTTSSE-EEEEETTSCEEEEETTTCCEEEEEC---------------------------------------------
T ss_pred EEECCCCCE-EEEEcCCCeEEEEECCCCceeeEec---------------------------------------------
Confidence 999999874 7999999999999998776544332
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC--------------------CCEEEEeecCCcEEE
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED--------------------GMYLLSAGSDSRIRL 335 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d--------------------g~~l~sgs~D~~i~l 335 (446)
+|...|.+++|+|+ |.+|++|+.|++|++
T Consensus 274 -------------------------------~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~i 322 (410)
T 1vyh_C 274 -------------------------------EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKM 322 (410)
T ss_dssp -------------------------------CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEE
T ss_pred -------------------------------CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEE
Confidence 23344555555553 789999999999999
Q ss_pred EecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEe
Q 013274 336 WDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 336 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtg 414 (446)
||+.++... ..+..+......+++++++..+++++. ..+++||+.+++.+.++.+|...|++++|+|++++|+||
T Consensus 323 wd~~~~~~~----~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sg 398 (410)
T 1vyh_C 323 WDVSTGMCL----MTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTG 398 (410)
T ss_dssp EETTTTEEE----EEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEE
T ss_pred EECCCCceE----EEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEE
Confidence 999987532 222223444567889999888887755 579999999999999999999999999999999999999
Q ss_pred eCCCcEEEeCC
Q 013274 415 GNDRQILVWCP 425 (446)
Q Consensus 415 s~D~~v~vW~~ 425 (446)
|.|++|+||+.
T Consensus 399 s~D~~i~vW~~ 409 (410)
T 1vyh_C 399 SVDQTVKVWEC 409 (410)
T ss_dssp ETTSEEEEEC-
T ss_pred eCCCcEEEEeC
Confidence 99999999986
No 4
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.7e-42 Score=325.08 Aligned_cols=293 Identities=19% Similarity=0.319 Sum_probs=238.3
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|++.|++|+|+|.++++|+|||.|++|++||+...... ...+ .....+|...|.++.++| ++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~-------~~~~-----~~~~~~h~~~v~~~~~s~-dg 77 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK-------FGVP-----VRSFKGHSHIVQDCTLTA-DG 77 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE-------EEEE-----EEEEECCSSCEEEEEECT-TS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc-------cccc-----ceEEeCCcccEEEEEECC-CC
Confidence 3478999999999999866789999999999999998643210 0001 123468999999998886 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s 195 (446)
.+|+||+.|++|++||+.+++.+..+. +.+.+.++++.+. ..+|++|+.|+.|++||++ +..+..+.+|...|.+
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~ 153 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKK---ASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQ 153 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTT---SCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCC---CCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEE
Confidence 999999999999999999999887776 4566888888874 4589999999999999996 4567788999999999
Q ss_pred EEEecCCC-----eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 196 VEWSTSSE-----WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 196 v~~s~~~~-----~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
+.|+|..+ ..+++++.|++|++||+++..+...
T Consensus 154 ~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~------------------------------------------ 191 (319)
T 3frx_A 154 VRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD------------------------------------------ 191 (319)
T ss_dssp EEECCC------CCEEEEEETTSCEEEEETTTTEEEEE------------------------------------------
T ss_pred EEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee------------------------------------------
Confidence 99998543 2579999999999999976432211
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
..+|..+|.+++|+|+|++|++|+.|++|++||+.+++... .
T Consensus 192 ----------------------------------~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~----~ 233 (319)
T 3frx_A 192 ----------------------------------FIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMY----T 233 (319)
T ss_dssp ----------------------------------ECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE----E
T ss_pred ----------------------------------ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE----E
Confidence 23678889999999999999999999999999999865321 1
Q ss_pred EEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEec--------ccccceEEEEEcCCCCEEEEeeCCCcEEE
Q 013274 351 VRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR--------GHYEYVNCCCFSSQDQELYTGGNDRQILV 422 (446)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~--------gH~~~v~~~~fSpd~~~lvtgs~D~~v~v 422 (446)
+. .......++++|++..++.+....+++|++..+.....+. .|...+.+++|||||++|++|+.|++|+|
T Consensus 234 ~~-~~~~v~~~~~sp~~~~la~~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~v 312 (319)
T 3frx_A 234 LS-AQDEVFSLAFSPNRYWLAAATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRV 312 (319)
T ss_dssp EE-CCSCEEEEEECSSSSEEEEEETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred ec-CCCcEEEEEEcCCCCEEEEEcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEE
Confidence 11 1345667899999999999888899999998877666554 45778999999999999999999999999
Q ss_pred eCCCC
Q 013274 423 WCPSR 427 (446)
Q Consensus 423 W~~~~ 427 (446)
|++.+
T Consensus 313 Wd~~t 317 (319)
T 3frx_A 313 WQVMT 317 (319)
T ss_dssp EEEEE
T ss_pred EEEee
Confidence 98754
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.7e-42 Score=328.14 Aligned_cols=289 Identities=18% Similarity=0.311 Sum_probs=233.4
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
...+.+|.+.|++|+|+| ++++|+|||.||+|+|||..++... .....|...|.++.++| +
T Consensus 57 ~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~-----------------~~~~~~~~~v~~~~~sp-~ 117 (354)
T 2pbi_B 57 RRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKE-----------------HAVTMPCTWVMACAYAP-S 117 (354)
T ss_dssp EEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE-----------------EEEECSSSCCCEEEECT-T
T ss_pred EEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcc-----------------eEEecCCCCEEEEEECC-C
Confidence 345789999999999997 6789999999999999998754321 11235677888888887 7
Q ss_pred CcEEEEEeCCCeEEEEECCCCe------eeEEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTR------VVMNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~------~~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
+.++++|+.|+++++|++.... ....+ .+.+.+..+.+++. ...|++++.|+.|++||+++++++..+.+
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~t~s~D~~v~lwd~~~~~~~~~~~~ 194 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNS---DMQILTASGDGTCALWDVESGQLLQSFHG 194 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSS---SSEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCC---CCEEEEEeCCCcEEEEeCCCCeEEEEEcC
Confidence 8999999999999999986431 12222 24456777788764 34789999999999999999999999999
Q ss_pred CCCCeEEEEEecCC-CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 189 HRDGIMTVEWSTSS-EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 189 h~~~v~sv~~s~~~-~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
|...|.++.|+|+. ...|++|+.||+|++||++++.++..+
T Consensus 195 h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~-------------------------------------- 236 (354)
T 2pbi_B 195 HGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAF-------------------------------------- 236 (354)
T ss_dssp CSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEE--------------------------------------
T ss_pred CCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEe--------------------------------------
Confidence 99999999998852 235899999999999999876543322
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
.+|...|++++|+|+|.+|++|+.|++|++||+.+++... .
T Consensus 237 --------------------------------------~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~-~ 277 (354)
T 2pbi_B 237 --------------------------------------ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVA-I 277 (354)
T ss_dssp --------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-E
T ss_pred --------------------------------------cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-E
Confidence 2567789999999999999999999999999998764321 1
Q ss_pred eeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeC
Q 013274 348 FETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWC 424 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~ 424 (446)
+.. .........+.+++++.++++++. ..+++||+.+++.+..+.+|.+.|++++||||+++|+|||.|++|+||+
T Consensus 278 ~~~-~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 278 YSK-ESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp ECC-TTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EcC-CCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 110 000113456789999998888765 5899999999999999999999999999999999999999999999996
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.4e-42 Score=334.56 Aligned_cols=295 Identities=19% Similarity=0.342 Sum_probs=232.9
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|++.|++|+|+| ++++|+|||.|++|+|||+.++... ....+|...|.++.++| ++
T Consensus 60 ~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~-----------------~~~~~h~~~v~~~~~s~-~g 120 (380)
T 3iz6_a 60 RTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKT-----------------HAIKLHCPWVMECAFAP-NG 120 (380)
T ss_dssp EEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEE-----------------EEEECCCTTCCCCEECT-TS
T ss_pred ecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccc-----------------eEEecCCCCEEEEEECC-CC
Confidence 45789999999999997 6789999999999999998765321 12247888899988887 88
Q ss_pred cEEEEEeCCCeEEEEECCCCee-------eEEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee--
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRV-------VMNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL-- 186 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l-- 186 (446)
++|++|+.|++|++||+.+... ...+ .+.+.+..+.+.+.. ...|++|+.|+.|++||++++..+..+
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~--~~~l~s~s~D~~i~~wd~~~~~~~~~~~~ 198 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQ--ETRLITGSGDQTCVLWDVTTGQRISIFGS 198 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSS--SSCEEEECTTSCEEEECTTTCCEEEEECC
T ss_pred CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCC--CCEEEEECCCCcEEEEEcCCCcEEEEeec
Confidence 9999999999999999875321 1111 123345555666542 346899999999999999999887766
Q ss_pred ---eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCcccccceeeccccccCCCCCcC
Q 013274 187 ---SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVK 262 (446)
Q Consensus 187 ---~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (446)
.+|...|.++.|++.+..+|+||+.|++|++||++... ++.
T Consensus 199 ~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~----------------------------------- 243 (380)
T 3iz6_a 199 EFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR----------------------------------- 243 (380)
T ss_dssp CSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE-----------------------------------
T ss_pred ccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE-----------------------------------
Confidence 68999999999987444568999999999999987421 110
Q ss_pred CCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCc
Q 013274 263 PRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 342 (446)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~ 342 (446)
...+|.+.|++|+|+|+|.+|+||+.|++|++||+.+++
T Consensus 244 -----------------------------------------~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~ 282 (380)
T 3iz6_a 244 -----------------------------------------TYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGH 282 (380)
T ss_dssp -----------------------------------------EECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTE
T ss_pred -----------------------------------------EECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCc
Confidence 124688899999999999999999999999999999875
Q ss_pred eeeeeeeEEEe----ecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEe----cccccceEEEEEcCCCCEEEE
Q 013274 343 NTLVNFETVRL----QTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTF----RGHYEYVNCCCFSSQDQELYT 413 (446)
Q Consensus 343 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l----~gH~~~v~~~~fSpd~~~lvt 413 (446)
.... +..... .......+++++++..+++++. ..+++||+.+++....+ .+|.+.|++++||||+++|+|
T Consensus 283 ~~~~-~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s 361 (380)
T 3iz6_a 283 QLQV-YNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCT 361 (380)
T ss_dssp EEEE-ECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEE
T ss_pred EEEE-ecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEE
Confidence 4221 111000 0112457899999999988765 58999999998888777 789999999999999999999
Q ss_pred eeCCCcEEEeCCCCCC
Q 013274 414 GGNDRQILVWCPSRHI 429 (446)
Q Consensus 414 gs~D~~v~vW~~~~~~ 429 (446)
||.|++|+||++..+.
T Consensus 362 gs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 362 GSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECTTSCEEEEECCSSS
T ss_pred eeCCCCEEEEecCCCc
Confidence 9999999999988764
No 7
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=8e-41 Score=325.19 Aligned_cols=358 Identities=36% Similarity=0.701 Sum_probs=269.9
Q ss_pred ccccccCCchhhhhhhhcccceeccccceeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCcccc
Q 013274 8 REAGQIRPNSFANRVKSHRLSTLQLSNYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAK 87 (446)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~ 87 (446)
|..+.-.+.-+...-...++..+.......++.+|.+.|++|+|+|.++++|++|+.||+|++||+.++..... ..
T Consensus 8 r~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~----~~ 83 (408)
T 4a11_B 8 RQTGLEDPLRLRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSY----YT 83 (408)
T ss_dssp HHHTSSCHHHHHHHHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSC----EE
T ss_pred cccCccCccceeeccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccce----Ee
Confidence 34444344444444344455566666667788899999999999974688999999999999999987653211 01
Q ss_pred ccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEee
Q 013274 88 HRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGT 167 (446)
Q Consensus 88 ~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs 167 (446)
.............+|...|.++.|+|.++.+|++++.|++|++||+.+++.+..+.....+..+.+.+...+..++++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (408)
T 4a11_B 84 CKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGT 163 (408)
T ss_dssp ECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEE
T ss_pred ccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEc
Confidence 11111122233457999999999998778899999999999999999999998888888888999998877777999999
Q ss_pred CCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCcccccc
Q 013274 168 EDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRK 246 (446)
Q Consensus 168 ~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 246 (446)
.|+.|++||++++.....+.+|.+.|.+++|+|+++++|++++.||.|++||+++.. ++..+.......
T Consensus 164 ~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~---------- 233 (408)
T 4a11_B 164 RGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKK---------- 233 (408)
T ss_dssp SSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCS----------
T ss_pred CCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCccccccccccccc----------
Confidence 999999999999999999999999999999999998778999999999999998754 222211100000
Q ss_pred eeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEE
Q 013274 247 VSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLS 326 (446)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~s 326 (446)
.........+|.+.|.+++|+|+|.+|++
T Consensus 234 ---------------------------------------------------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 262 (408)
T 4a11_B 234 ---------------------------------------------------SQAVESANTAHNGKVNGLCFTSDGLHLLT 262 (408)
T ss_dssp ---------------------------------------------------CCCTTTSSCSCSSCEEEEEECTTSSEEEE
T ss_pred ---------------------------------------------------ceeeccccccccCceeEEEEcCCCCEEEE
Confidence 00000112467889999999999999999
Q ss_pred eecCCcEEEEecCcCceeeeeeeEEEee--cCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEE
Q 013274 327 AGSDSRIRLWDVESGRNTLVNFETVRLQ--TSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCF 404 (446)
Q Consensus 327 gs~D~~i~lWd~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~f 404 (446)
++.|+.|++||+.+++............ ..............+++......+++||+.+++.+..+.+|.+.|++++|
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 9999999999999875422111110000 11112223334455666667789999999999999999999999999999
Q ss_pred cCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 405 SSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 405 Spd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
+||+++|+||+.|+.|++|+++....
T Consensus 343 s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 343 QSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp ETTTTEEEEEETTSCEEEEEECC---
T ss_pred cCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 99999999999999999999986653
No 8
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=7.9e-41 Score=319.21 Aligned_cols=296 Identities=19% Similarity=0.302 Sum_probs=231.8
Q ss_pred eEeCCCccceeEEEe-----ecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEE
Q 013274 37 EIVSPHKGSINSLQV-----DLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIW 111 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~-----s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~ 111 (446)
.++.+|++.|++|+| ++.++.+|+|||.|++|+|||+.+..... .. ..+ .....+|...|.++.+
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~---~~--~~~-----~~~l~~h~~~V~~~~~ 84 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNG---YF--GIP-----HKALTGHNHFVSDLAL 84 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSS---BS--EEE-----EEEECCCSSCEEEEEE
T ss_pred eeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCccc---cc--ccc-----cchhccCCCceEEEEE
Confidence 457899999999999 65578899999999999999987543210 00 000 1234689999999999
Q ss_pred eecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee--eeeC
Q 013274 112 YPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ--TLSG 188 (446)
Q Consensus 112 ~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~--~l~~ 188 (446)
+| ++.+++||+.|++|++||+.+++.+..+. +.+.+.+++++|.. .+|++++.|+.|++||+....... ...+
T Consensus 85 ~~-~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 160 (343)
T 2xzm_R 85 SQ-ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN---RQILSAGAEREIKLWNILGECKFSSAEKEN 160 (343)
T ss_dssp CS-STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST---TEEEEEETTSCEEEEESSSCEEEECCTTTS
T ss_pred CC-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC---CEEEEEcCCCEEEEEeccCCceeeeecccC
Confidence 87 78899999999999999999998887776 45678889998853 478999999999999998443222 1237
Q ss_pred CCCCeEEEEEecCCC---------eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 189 HRDGIMTVEWSTSSE---------WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 189 h~~~v~sv~~s~~~~---------~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
|...|.+++|+|++. .+|++++.|++|++||.+. ....
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~-------------------------------- 207 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTNF-QIRY-------------------------------- 207 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETTT-EEEE--------------------------------
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCCC-ceeE--------------------------------
Confidence 999999999999862 2579999999999999432 1111
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecC
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 339 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~ 339 (446)
...+|.+.|.+++|+|+|++|++|+.|++|++||+.
T Consensus 208 --------------------------------------------~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 208 --------------------------------------------TFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp --------------------------------------------EEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESS
T ss_pred --------------------------------------------EEcCccccceEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 123577889999999999999999999999999995
Q ss_pred cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEE--Eec-----------ccccceEEEEEcC
Q 013274 340 SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCL--TFR-----------GHYEYVNCCCFSS 406 (446)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~--~l~-----------gH~~~v~~~~fSp 406 (446)
+.......+ ........++++|++.+++++....+++|++.+++... .+. +|...|++++|+|
T Consensus 244 ~~~~~~~~~----~~~~~v~~v~~sp~~~~la~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 319 (343)
T 2xzm_R 244 NLTYPQREF----DAGSTINQIAFNPKLQWVAVGTDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNA 319 (343)
T ss_dssp CCSSCSEEE----ECSSCEEEEEECSSSCEEEEEESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECS
T ss_pred CCcccceee----cCCCcEEEEEECCCCCEEEEECCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECC
Confidence 432211111 11234567889999988888888899999998776543 444 7999999999999
Q ss_pred CCCEEEEeeCCCcEEEeCCCC
Q 013274 407 QDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 407 d~~~lvtgs~D~~v~vW~~~~ 427 (446)
++++|++|+.|++|++|+.++
T Consensus 320 ~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 320 LGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp SSCCEEEEETTSEEEEEEEEE
T ss_pred CCCeEEEecCCceEEEEEEEc
Confidence 999999999999999998764
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-40 Score=310.34 Aligned_cols=290 Identities=17% Similarity=0.277 Sum_probs=233.3
Q ss_pred ceeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec
Q 013274 35 YKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114 (446)
Q Consensus 35 ~~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~ 114 (446)
.+..+.+|++.|++|+|+| ++++|+||+.||+|+|||++++... ....+|...|.++.++|
T Consensus 5 ~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~-----------------~~~~~~~~~v~~~~~~~- 65 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEV-----------------RSIQVTETPVRAGKFIA- 65 (304)
T ss_dssp CEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEE-----------------EEEECCSSCEEEEEEEG-
T ss_pred eEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCcee-----------------EEeeccCCcEEEEEEeC-
Confidence 3566889999999999997 6789999999999999999765321 12247888899998887
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCCCCC
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDG 192 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h~~~ 192 (446)
++++|++|+.|++|++||+.+++.+..+. +.+.+.+++++|.. .+|++|+.|+.|++||++++ .....+.+|...
T Consensus 66 ~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~---~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~ 142 (304)
T 2ynn_A 66 RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHF 142 (304)
T ss_dssp GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSCEEEEEGGGTTEEEEEECCCCSC
T ss_pred CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC---CEEEEECCCCeEEEEECCCCcchhhhhcccCCc
Confidence 78899999999999999999999887776 45668889998753 58999999999999999987 456778999999
Q ss_pred eEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
|.+++|+|.+...|+||+.|++|++||+++......+
T Consensus 143 v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~------------------------------------------- 179 (304)
T 2ynn_A 143 VMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTL------------------------------------------- 179 (304)
T ss_dssp EEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEE-------------------------------------------
T ss_pred EEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcccee-------------------------------------------
Confidence 9999999955446899999999999998754321111
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc--CCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE--DGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~--dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
..+|...+..+.|+| ++.+|++|+.|++|++||+.+++.. ..
T Consensus 180 --------------------------------~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~----~~ 223 (304)
T 2ynn_A 180 --------------------------------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV----AT 223 (304)
T ss_dssp --------------------------------ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEE----EE
T ss_pred --------------------------------ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccc----ee
Confidence 013445688888876 7889999999999999999987532 22
Q ss_pred EEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCC--EEEEeeCCCcEEEeCCC
Q 013274 351 VRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ--ELYTGGNDRQILVWCPS 426 (446)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~--~lvtgs~D~~v~vW~~~ 426 (446)
+..+......++++|++..+++++. ..+++||+.+++...++..|...+++++|+|+++ +|++|+.|+ +.+|++.
T Consensus 224 ~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~~ 301 (304)
T 2ynn_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSLG 301 (304)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEECC
T ss_pred eCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEec
Confidence 3334455567889999888887754 6899999999999999999999999999999885 477776555 6666554
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.2e-41 Score=319.78 Aligned_cols=296 Identities=13% Similarity=0.132 Sum_probs=223.8
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCC-CCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEG-GGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
..|...|++++|+| +|++|+++| |+++++||......... ........ .....|...|.++.|+| + +.
T Consensus 27 ~~~~~~v~~~~fs~-dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~-------~~~~~~~~~v~~~~~s~-d-~~ 95 (344)
T 4gqb_B 27 ACMERQLEAARYRS-DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFC-------SAGVQTEAGVADLTWVG-E-RG 95 (344)
T ss_dssp SSCCSEEEEEEECT-TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGC-------SEEEEESSCEEEEEEET-T-TE
T ss_pred ccccCCEEEEEECC-CCCEEEEEe-CCceEEeeceeeeeccccccCCccee-------eeeeccCCCEEEEEEeC-C-Ce
Confidence 35778899999997 688888877 88899998532110000 00000000 01124667899999987 4 47
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEe-----cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCe
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFK-----MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGI 193 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v 193 (446)
|++|+.|++|+|||+++++.+.... +.+.+.+++++++ ..+|++|+.|+.|++||+++++++..+.+|.+.|
T Consensus 96 l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd---g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V 172 (344)
T 4gqb_B 96 ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS---GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQV 172 (344)
T ss_dssp EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCE
T ss_pred EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC---CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCce
Confidence 8999999999999999887654332 4566889999875 4589999999999999999999999999999999
Q ss_pred EEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCC
Q 013274 194 MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG 273 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (446)
.+++|+|++..+|+|++.|++|++||++++++...+.
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~------------------------------------------- 209 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG------------------------------------------- 209 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------------------------------------------
T ss_pred EEEEecCCCCCceeeeccccccccccccccceeeeee-------------------------------------------
Confidence 9999999987778999999999999998765433221
Q ss_pred CceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC-CCEEEEeecCCcEEEEecCcCceeeeeeeEEE
Q 013274 274 NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED-GMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 352 (446)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d-g~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~ 352 (446)
...|...+.+++|+|+ +.+|++|+.|++|++||+.+++.. ..+.
T Consensus 210 -------------------------------~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~----~~~~ 254 (344)
T 4gqb_B 210 -------------------------------CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCV----LSSA 254 (344)
T ss_dssp -----------------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CC----EEEE
T ss_pred -------------------------------cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEE----EEEc
Confidence 0123445899999985 578999999999999999987542 2233
Q ss_pred eecCCCeEEEEcCCCc-EEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCC-EEEEeeCCCcEEEeCCCCC
Q 013274 353 LQTSKPIQLATTQDPA-VVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ-ELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 353 ~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~~~~~ 428 (446)
.+......++++|++. ++++++ +..+++||+.++++ ..+.+|.+.|++|+|||+++ +|+|||.|++|++|+++..
T Consensus 255 ~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 255 VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC-
T ss_pred CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCC
Confidence 3445566788999874 566554 56899999988775 46789999999999999986 5779999999999998754
No 11
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.4e-40 Score=311.71 Aligned_cols=296 Identities=19% Similarity=0.307 Sum_probs=233.6
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
+..++||++.|++|+|+|+++++|+|||.|++|+|||+.+..... . .......+|...|.++.|+| +
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~-------~-----~~~~~l~~h~~~V~~~~~s~-d 97 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY-------G-----IPQRALRGHSHFVSDVVISS-D 97 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS-------E-----EEEEEECCCSSCEEEEEECT-T
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc-------c-----eeeEEEeCCCCCEEEEEECC-C
Confidence 445789999999999998778899999999999999997654211 0 01123468999999999987 8
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCC-ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce-eeeeeCCCCCe
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI-SQTLSGHRDGI 193 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~-~~~l~~h~~~v 193 (446)
+.+|++++.|+.|++|+.............. ......+.+ ...+|++++.|+.+++||+..... ...+.+|...+
T Consensus 98 g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v 174 (340)
T 4aow_A 98 GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSS---DNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWV 174 (340)
T ss_dssp SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECT---TSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCE
T ss_pred CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEee---cCccceeecCCCeEEEEEeCCCceEEEEeccccCcc
Confidence 8999999999999999999887766555433 344444444 335789999999999999987654 45567899999
Q ss_pred EEEEEecCCC-eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 194 MTVEWSTSSE-WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 194 ~sv~~s~~~~-~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
..++|++++. .++++++.|++|++||++++.+...
T Consensus 175 ~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~-------------------------------------------- 210 (340)
T 4aow_A 175 SCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTN-------------------------------------------- 210 (340)
T ss_dssp EEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEE--------------------------------------------
T ss_pred cceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeE--------------------------------------------
Confidence 9999998754 3578999999999999987643322
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 352 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~ 352 (446)
..+|.++|++|+|+|+|++|++|+.|++|++||+.+.+... ...
T Consensus 211 --------------------------------~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~----~~~ 254 (340)
T 4aow_A 211 --------------------------------HIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLY----TLD 254 (340)
T ss_dssp --------------------------------ECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEE----EEE
T ss_pred --------------------------------ecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceee----eec
Confidence 13577889999999999999999999999999999865321 111
Q ss_pred eecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEE---------ecccccceEEEEEcCCCCEEEEeeCCCcEEEe
Q 013274 353 LQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLT---------FRGHYEYVNCCCFSSQDQELYTGGNDRQILVW 423 (446)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~---------l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW 423 (446)
.......+.+.|++.+++.+....+++||+.++..... +.+|...|++++|+||+++|+||+.|++|+||
T Consensus 255 -~~~~v~~~~~~~~~~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW 333 (340)
T 4aow_A 255 -GGDIINALCFSPNRYWLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVW 333 (340)
T ss_dssp -CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred -CCceEEeeecCCCCceeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 12344567788888888888888999999987765544 35799999999999999999999999999999
Q ss_pred CCCCC
Q 013274 424 CPSRH 428 (446)
Q Consensus 424 ~~~~~ 428 (446)
++.++
T Consensus 334 ~~~tG 338 (340)
T 4aow_A 334 QVTIG 338 (340)
T ss_dssp EEEC-
T ss_pred eCCCc
Confidence 98764
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-39 Score=306.35 Aligned_cols=290 Identities=22% Similarity=0.408 Sum_probs=234.8
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++... ....+|...|.++.|+| ++
T Consensus 17 ~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~-----------------~~~~~h~~~v~~~~~~~-~~ 77 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFE-----------------KTISGHKLGISDVAWSS-DS 77 (312)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECT-TS
T ss_pred EEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccc-----------------hhhccCCCceEEEEEcC-CC
Confidence 34679999999999997 6789999999999999998765321 12357999999999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s 195 (446)
++|++++.|++|++||+.+++++..+.. .+.+..+.+.+. ..++++|+.|+.|++||+++++.+..+..|..+|.+
T Consensus 78 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQ---SNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSA 154 (312)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS---SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC---CCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEE
Confidence 8999999999999999999988877763 455778888874 458999999999999999999999999999999999
Q ss_pred EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+.|+|+++. |++++.||.|++||++++.++..+.
T Consensus 155 ~~~~~~~~~-l~~~~~d~~i~~wd~~~~~~~~~~~--------------------------------------------- 188 (312)
T 4ery_A 155 VHFNRDGSL-IVSSSYDGLCRIWDTASGQCLKTLI--------------------------------------------- 188 (312)
T ss_dssp EEECTTSSE-EEEEETTSCEEEEETTTCCEEEEEC---------------------------------------------
T ss_pred EEEcCCCCE-EEEEeCCCcEEEEECCCCceeeEEe---------------------------------------------
Confidence 999999885 7899999999999998765433220
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeec
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 355 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~ 355 (446)
..|..++..++|+|++.+|++++.|+.|++||+.+++... .+.... ..
T Consensus 189 ------------------------------~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~-~~ 236 (312)
T 4ery_A 189 ------------------------------DDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLK-TYTGHK-NE 236 (312)
T ss_dssp ------------------------------CSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEE-EECSSC-CS
T ss_pred ------------------------------ccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE-EEEecC-Cc
Confidence 1233468899999999999999999999999998875321 111100 01
Q ss_pred CCCeEEEE-cCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEee--CCCcEEEeCCC
Q 013274 356 SKPIQLAT-TQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGG--NDRQILVWCPS 426 (446)
Q Consensus 356 ~~~~~~~~-~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs--~D~~v~vW~~~ 426 (446)
.......+ .+++..+++++. ..+++||+.+++.+..+.+|.+.|.+++|+|++++|++++ .|++|++|+.+
T Consensus 237 ~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 237 KYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred eEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 11222333 355666666654 5799999999999999999999999999999999999987 69999999865
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=9.1e-41 Score=320.59 Aligned_cols=291 Identities=15% Similarity=0.204 Sum_probs=220.2
Q ss_pred CCCccceeEEEeecCCCCEEEEeeC------CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGAS------DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~------Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
..|.+.|++|+|+| ||++|||||. |++|++|+..++..... + .....+|...|.++.|+|
T Consensus 39 ~~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~---~----------~~~~~~~~~~V~~~~~s~ 104 (357)
T 4g56_B 39 ACMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNES---L----------CTAGVQTEAGVTDVAWVS 104 (357)
T ss_dssp -CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGG---G----------CSEEEECSSCEEEEEEET
T ss_pred ccccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCccee---E----------ecccCCCCCCEEEEEEcC
Confidence 46999999999997 6899999998 77899998765532110 0 011236888999999987
Q ss_pred cCCcEEEEEeCCCeEEEEECCCCeeeEE--E---ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMN--F---KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
++ .+++++.|++|+|||+.+++.... + .+.+.+.++++++. ..+|++|+.|+.|++||+++++++..+.+
T Consensus 105 -d~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd---g~~l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 105 -EK-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD---GTQAVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp -TT-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS---SSEEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred -CC-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC---CCEEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 44 567789999999999988764322 2 24456888898875 45899999999999999999999999999
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 189 h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
|.+.|.+++|+|+++.++++++.||+|++||++++++...+
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~--------------------------------------- 220 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRI--------------------------------------- 220 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBC---------------------------------------
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeee---------------------------------------
Confidence 99999999999998767899999999999999865321100
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC-CEEEEeecCCcEEEEecCcCceeeee
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG-MYLLSAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg-~~l~sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
....|...+.+++|+|++ .+|++|+.|+.|++||+.+++...
T Consensus 221 -----------------------------------~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~-- 263 (357)
T 4g56_B 221 -----------------------------------DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQ-- 263 (357)
T ss_dssp -----------------------------------CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCE--
T ss_pred -----------------------------------eeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeE--
Confidence 012345679999999984 689999999999999999875421
Q ss_pred eeEEEeecCCCeEEEEcCCC-cEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcC-CCCEEEEeeCCCcEEEeC
Q 013274 348 FETVRLQTSKPIQLATTQDP-AVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS-QDQELYTGGNDRQILVWC 424 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp-d~~~lvtgs~D~~v~vW~ 424 (446)
.+..+......++++|++ .++++++ +..+++||+.+++.+..+ +|.+.|++|+||| |+++|+|||.|++|++|+
T Consensus 264 --~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~ 340 (357)
T 4g56_B 264 --TSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHH 340 (357)
T ss_dssp --EECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEE
T ss_pred --EEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEE
Confidence 222233455678888876 4566654 468999999988877655 8999999999999 899999999999999999
Q ss_pred CCCC
Q 013274 425 PSRH 428 (446)
Q Consensus 425 ~~~~ 428 (446)
++..
T Consensus 341 ~~~~ 344 (357)
T 4g56_B 341 LPSE 344 (357)
T ss_dssp CC--
T ss_pred CCCC
Confidence 8644
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.4e-40 Score=314.35 Aligned_cols=298 Identities=18% Similarity=0.292 Sum_probs=227.8
Q ss_pred EeCCCcc-ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 38 IVSPHKG-SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 38 ~~~~H~~-~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
.+.+|.+ .|++|+|+| ++++||||+.|++|+|||++++... .. .....+|...|.++.|+| ++
T Consensus 10 ~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~----------~~----~~~~~~h~~~v~~~~~sp-~g 73 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWI----------CK----SVLSEGHQRTVRKVAWSP-CG 73 (345)
T ss_dssp EECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEE----------EE----EEECSSCSSCEEEEEECT-TS
T ss_pred eecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcce----------ee----eeeccccCCcEEEEEECC-CC
Confidence 3578987 999999997 6789999999999999998754310 00 011258999999999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc---eeeeeeCCC
Q 013274 117 GLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA---ISQTLSGHR 190 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~---~~~~l~~h~ 190 (446)
++|++|+.|++|++||+..+. ++..+. +.+.+.+++++|. ..+|++|+.|+.|++||++++. .+..+.+|.
T Consensus 74 ~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~---~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~ 150 (345)
T 3fm0_A 74 NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPS---GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT 150 (345)
T ss_dssp SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTT---SSEEEEEETTSCEEEEEECTTSCEEEEEEECCCC
T ss_pred CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCC---CCEEEEEECCCeEEEEECCCCCCeEEEEEecCcC
Confidence 899999999999999988764 344443 3456888999884 4589999999999999998764 456788999
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
..|.+++|+|+++. |++++.|++|++||++.+.....
T Consensus 151 ~~v~~~~~~p~~~~-l~s~s~d~~i~~w~~~~~~~~~~------------------------------------------ 187 (345)
T 3fm0_A 151 QDVKHVVWHPSQEL-LASASYDDTVKLYREEEDDWVCC------------------------------------------ 187 (345)
T ss_dssp SCEEEEEECSSSSC-EEEEETTSCEEEEEEETTEEEEE------------------------------------------
T ss_pred CCeEEEEECCCCCE-EEEEeCCCcEEEEEecCCCEEEE------------------------------------------
Confidence 99999999999885 78999999999999875421100
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceee-----
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL----- 345 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~----- 345 (446)
....+|.+.|.+|+|+|+|++|++|+.|++|++||........
T Consensus 188 --------------------------------~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~ 235 (345)
T 3fm0_A 188 --------------------------------ATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACS 235 (345)
T ss_dssp --------------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC
T ss_pred --------------------------------EEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceee
Confidence 0123678889999999999999999999999999974321100
Q ss_pred ------eeeeEEE-eecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCc---------eEEEecccccceEEEEEcCCC
Q 013274 346 ------VNFETVR-LQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGK---------TCLTFRGHYEYVNCCCFSSQD 408 (446)
Q Consensus 346 ------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~---------~~~~l~gH~~~v~~~~fSpd~ 408 (446)
..+..+. .+......+++++++..+++++. ..+++|++..+. ....+.+|.+.|++|+|+|++
T Consensus 236 ~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~ 315 (345)
T 3fm0_A 236 GSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE 315 (345)
T ss_dssp ---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS
T ss_pred ccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC
Confidence 0001111 12234556788888887777654 689999987543 123457999999999999998
Q ss_pred -CEEEEeeCCCcEEEeCCCCCC
Q 013274 409 -QELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 409 -~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+|||||.|++|++|++....
T Consensus 316 ~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 316 PGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp TTEEEEEETTSCEEEEEECC--
T ss_pred ceEEEEcCCCCcEEEEEecCCC
Confidence 599999999999999987654
No 15
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=3.5e-41 Score=332.25 Aligned_cols=299 Identities=17% Similarity=0.219 Sum_probs=223.7
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
...+|...|++|+|+|.++++||+|+.||+|+|||+.++... . .....+|.+.|+++.|+|.++.
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~----------~-----~~~~~gH~~~V~~l~f~p~~~~ 178 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP----------T-----FIKGIGAGGSITGLKFNPLNTN 178 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC----------E-----EECCCSSSCCCCEEEECSSCTT
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce----------e-----EEEccCCCCCEEEEEEeCCCCC
Confidence 345789999999999878889999999999999998765321 0 0123589999999999988889
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEecCC---ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPG---KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
+|+|||.|++|++||++++.......... .+.++++++ +..+|++|+.|+.|++||++. +.+..+.+|.+.|.
T Consensus 179 ~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~ 254 (435)
T 4e54_B 179 QFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSA---SSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVT 254 (435)
T ss_dssp EEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEET---TTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEE
T ss_pred EEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECC---CCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEE
Confidence 99999999999999998765443333222 234556665 345899999999999999965 56678899999999
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
+++|+|+++.+|++|+.|++|++||+++......
T Consensus 255 ~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~---------------------------------------------- 288 (435)
T 4e54_B 255 HVALNPCCDWFLATASVDQTVKIWDLRQVRGKAS---------------------------------------------- 288 (435)
T ss_dssp EEEECTTCSSEEEEEETTSBCCEEETTTCCSSSC----------------------------------------------
T ss_pred eeeecCCCceEEEEecCcceeeEEecccccccce----------------------------------------------
Confidence 9999999888889999999999999986421000
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEE--E
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV--R 352 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~--~ 352 (446)
.....+|..+|++|+|+|+|.+|+||+.|++|++||+.++.......... .
T Consensus 289 ---------------------------~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~ 341 (435)
T 4e54_B 289 ---------------------------FLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRH 341 (435)
T ss_dssp ---------------------------CSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCC
T ss_pred ---------------------------EEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccc
Confidence 00123688889999999999999999999999999998865432211100 0
Q ss_pred eecCCCeEEEEcCCCcEEEEeC-----------C--CceEEEEeecCceEEEe-cccccceEEE-EEcCCCCEEEEeeCC
Q 013274 353 LQTSKPIQLATTQDPAVVFVPC-----------M--TAVKAFDIWSGKTCLTF-RGHYEYVNCC-CFSSQDQELYTGGND 417 (446)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~-----------~--~~~~~~d~~~~~~~~~l-~gH~~~v~~~-~fSpd~~~lvtgs~D 417 (446)
..........+.++...++++. . ..+++||+.+++.+..+ .+|...|.++ +|||||++|++|+ |
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d 420 (435)
T 4e54_B 342 FQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-G 420 (435)
T ss_dssp CSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-S
T ss_pred cccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-C
Confidence 0011122334444444443332 1 25899999999988776 4788899887 6999999999987 7
Q ss_pred CcEEEeCCCCCC
Q 013274 418 RQILVWCPSRHI 429 (446)
Q Consensus 418 ~~v~vW~~~~~~ 429 (446)
++|+||+++.++
T Consensus 421 ~~i~iW~~~~gk 432 (435)
T 4e54_B 421 YHILIWSQQEAR 432 (435)
T ss_dssp SEEEECCCC---
T ss_pred CcEEEEECCcCe
Confidence 899999998664
No 16
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=4.8e-40 Score=337.93 Aligned_cols=363 Identities=18% Similarity=0.253 Sum_probs=244.4
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|++++|+|++...|+|||.|++|++||..+... ...+.+|...|.++.|+| +++
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~-----------------~~~l~~H~~~V~~v~fsp-dg~ 203 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKF-----------------KSTFGEHTKFVHSVRYNP-DGS 203 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEE-----------------EEEECCCSSCEEEEEECT-TSS
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeE-----------------eeeeccccCceEEEEECC-CCC
Confidence 46799999999999985444799999999999999765321 112358999999999987 789
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEe--------cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee-----
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFK--------MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ----- 184 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~----- 184 (446)
+|+||+.|++|++||+.+++.+..+. +.+.+..++|+|+ ..+|++++.|+.|++||++++++..
T Consensus 204 ~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spd---g~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 204 LFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPD---GTKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred EEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCC---CCEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 99999999999999999988877762 4567889999885 3589999999999999998875433
Q ss_pred --------------------------------------eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCcee
Q 013274 185 --------------------------------------TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF 226 (446)
Q Consensus 185 --------------------------------------~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~ 226 (446)
.+.+|...|++++|+|++++ |+|++.|++|++||++++.+.
T Consensus 281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~-l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT-LFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEE
T ss_pred CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE-EEEEeCCCcEEEEECCCCcee
Confidence 34589999999999999985 789999999999999987765
Q ss_pred EEeec-ccccccCCCcccccc-eeec--cccccCCCCCcCCCCc----cccccCCCceeecccceeecCC--ccccccCC
Q 013274 227 RVLDQ-SQSQLGRRPPLLKRK-VSIS--KSLSAGQNSSVKPRAP----QKRSANGNGVRQSSVGRIPAKG--SVRQRLHP 296 (446)
Q Consensus 227 ~~~~~-~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 296 (446)
..+.. +...+.......... +... ..+............. .........+..++.+...... ........
T Consensus 360 ~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~ 439 (611)
T 1nr0_A 360 RVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSH 439 (611)
T ss_dssp ECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEET
T ss_pred eecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeC
Confidence 43311 111000000000000 0000 0000000000000000 0000000111111111110000 00000000
Q ss_pred CcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-
Q 013274 297 GMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM- 375 (446)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 375 (446)
+. .....|...+.+++|+|||++|++|+.|++|++||+.++.... ... ..+......++++|++.++++++.
T Consensus 440 ~~----~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~--~~~-~~h~~~v~~v~fspdg~~las~s~d 512 (611)
T 1nr0_A 440 GK----LTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSE--VKT-IVHPAEITSVAFSNNGAFLVATDQS 512 (611)
T ss_dssp TE----EEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEE--EEE-EECSSCEEEEEECTTSSEEEEEETT
T ss_pred Cc----eeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceee--eec-cCCCCceEEEEECCCCCEEEEEcCC
Confidence 00 0112366779999999999999999999999999998753211 111 233456678999999999888754
Q ss_pred CceEEEEeec-CceEEE--ecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 376 TAVKAFDIWS-GKTCLT--FRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 376 ~~~~~~d~~~-~~~~~~--l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+++|++.+ ++.... +.+|.+.|++++||||+++|+|||.|++|+||+++.+.
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~ 569 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPS 569 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTT
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCcc
Confidence 6899999987 555443 45599999999999999999999999999999997653
No 17
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-38 Score=303.01 Aligned_cols=293 Identities=20% Similarity=0.294 Sum_probs=216.6
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|++.|++++|+++ +|+||+.|++|+|||++.+.. ...... ...+|...|.++.|+| ++.
T Consensus 9 ~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~----------~~~~~~---~~~~h~~~v~~v~~sp-~~~ 71 (330)
T 2hes_X 9 SLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDF----------TLIDVL---DETAHKKAIRSVAWRP-HTS 71 (330)
T ss_dssp EEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCC----------EEEEEE---CTTCCCSCEEEEEECT-TSS
T ss_pred eeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCe----------EEEEEE---ecCCccCCEEEEEECC-CCC
Confidence 46799999999999862 899999999999999975421 000011 1124999999999987 788
Q ss_pred EEEEEeCCCeEEEEECCC-------CeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC----ceeee
Q 013274 118 LFVTGSYDHYVKVWDTNC-------TRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG----AISQT 185 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~-------~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~----~~~~~ 185 (446)
+|++|+.|++|++||+.. .+++..+. +.+.+.+++++|. ..+|++|+.|+.|++||++.. +++..
T Consensus 72 ~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~---g~~las~s~D~~v~iwd~~~~~~~~~~~~~ 148 (330)
T 2hes_X 72 LLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND---GYYLATCSRDKSVWIWETDESGEEYECISV 148 (330)
T ss_dssp EEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT---SCEEEEEETTSCEEEEECCTTCCCCEEEEE
T ss_pred EEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC---CCEEEEEeCCCEEEEEeccCCCCCeEEEEE
Confidence 999999999999999853 23333343 3456888888875 458999999999999999532 45678
Q ss_pred eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc--eeEEeecccccccCCCcccccceeeccccccCCCCCcCC
Q 013274 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG--CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKP 263 (446)
Q Consensus 186 l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (446)
+.+|...|.+++|+|+++ +|+||+.|++|++||++.+. ++.
T Consensus 149 ~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~~~~~~------------------------------------ 191 (330)
T 2hes_X 149 LQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDDWECVA------------------------------------ 191 (330)
T ss_dssp ECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTEEEEEE------------------------------------
T ss_pred eccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCCeeEEE------------------------------------
Confidence 899999999999999987 47999999999999986531 111
Q ss_pred CCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC--CCEEEEeecCCcEEEEecCcC
Q 013274 264 RAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED--GMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d--g~~l~sgs~D~~i~lWd~~~~ 341 (446)
...+|.+.|.+++|+|+ +.+|+||+.|++|++||+.++
T Consensus 192 ----------------------------------------~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 192 ----------------------------------------VLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp ----------------------------------------EECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred ----------------------------------------EccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 12468888999999999 779999999999999998764
Q ss_pred cee----eeeeeEEEe-ecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCc--eE-EEeccccc-ceEEEEEcC--CCCE
Q 013274 342 RNT----LVNFETVRL-QTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGK--TC-LTFRGHYE-YVNCCCFSS--QDQE 410 (446)
Q Consensus 342 ~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~--~~-~~l~gH~~-~v~~~~fSp--d~~~ 410 (446)
... ......+.. +......+++++++.++..+.+..+++|+..+++ .. ..+.+|.. .|++++|+| |+++
T Consensus 232 ~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~ 311 (330)
T 2hes_X 232 DEDDQQEWVCEAILPDVHKRQVYNVAWGFNGLIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTI 311 (330)
T ss_dssp CTTSCEEEEEEEECCSCCSSCEEEEEECTTSCEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CC
T ss_pred CccccceeEEeeecccccccceEEEEEcCCCEEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceE
Confidence 210 011111111 2334556777776655555566789999998774 33 34578987 899999999 7899
Q ss_pred EEEeeCCCcEEEeCCCC
Q 013274 411 LYTGGNDRQILVWCPSR 427 (446)
Q Consensus 411 lvtgs~D~~v~vW~~~~ 427 (446)
|+|||.|++|+||+++.
T Consensus 312 las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 312 LATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEETTSEEEEEEC--
T ss_pred EEEecCCCcEEEEEecc
Confidence 99999999999999865
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=6.9e-39 Score=329.37 Aligned_cols=303 Identities=17% Similarity=0.238 Sum_probs=232.8
Q ss_pred cceeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 34 ~~~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
.....+.+|++.|++++|+| ++++||||+.|++|+|||+.++... . .....+|...|.++.|+|
T Consensus 50 ~~~~~~~~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~------------~---~~~~~~~~~~v~~v~fs~ 113 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHI------------L---KTTIPVFSGPVKDISWDS 113 (611)
T ss_dssp SCCEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCC------------E---EEEEECSSSCEEEEEECT
T ss_pred ccCeEecCCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCCCcce------------e---eEeecccCCceEEEEECC
Confidence 33456789999999999997 6899999999999999998654311 0 112357899999999987
Q ss_pred cCCcEEEEEeCC----CeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 114 VDTGLFVTGSYD----HYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 114 ~~~~~l~s~s~D----~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
++++|++++.| ++|++||. ++....+. +.+.+.+++|+|... .+|++|+.|+.|++||..++++...+.+
T Consensus 114 -dg~~l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~--~~l~s~s~D~~v~lwd~~~~~~~~~l~~ 188 (611)
T 1nr0_A 114 -ESKRIAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRP--FRIISGSDDNTVAIFEGPPFKFKSTFGE 188 (611)
T ss_dssp -TSCEEEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEECSSSS--CEEEEEETTSCEEEEETTTBEEEEEECC
T ss_pred -CCCEEEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEECCCCC--eEEEEEeCCCeEEEEECCCCeEeeeecc
Confidence 78899988876 47888885 44443333 345688899988532 4699999999999999999998999999
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 189 h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
|.+.|.+++|+|+++. |+||+.|++|++||++++.+...+...
T Consensus 189 H~~~V~~v~fspdg~~-las~s~D~~i~lwd~~~g~~~~~~~~~------------------------------------ 231 (611)
T 1nr0_A 189 HTKFVHSVRYNPDGSL-FASTGGDGTIVLYNGVDGTKTGVFEDD------------------------------------ 231 (611)
T ss_dssp CSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCEEEECBCT------------------------------------
T ss_pred ccCceEEEEECCCCCE-EEEEECCCcEEEEECCCCcEeeeeccc------------------------------------
Confidence 9999999999999985 799999999999999876554332100
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeee
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF 348 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~ 348 (446)
.....+|.+.|.+++|+|+|++|+|++.|++|++||+.+++... .+
T Consensus 232 ---------------------------------~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~-~~ 277 (611)
T 1nr0_A 232 ---------------------------------SLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEK-TI 277 (611)
T ss_dssp ---------------------------------TSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-EE
T ss_pred ---------------------------------cccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceee-ee
Confidence 00013688899999999999999999999999999999875321 11
Q ss_pred eEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 349 ETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
............+.+ ....++.......+++|+..+++....+.+|.+.|++++||||+++|+||+.|++|++|++.+.
T Consensus 278 ~~~~~~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~ 356 (611)
T 1nr0_A 278 PVGTRIEDQQLGIIW-TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTG 356 (611)
T ss_dssp ECCSSGGGCEEEEEE-CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC
T ss_pred cCCCCccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCC
Confidence 100000011122233 2233344445678999999888888899999999999999999999999999999999999865
Q ss_pred C
Q 013274 429 I 429 (446)
Q Consensus 429 ~ 429 (446)
.
T Consensus 357 ~ 357 (611)
T 1nr0_A 357 I 357 (611)
T ss_dssp C
T ss_pred c
Confidence 4
No 19
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=9.1e-39 Score=333.41 Aligned_cols=294 Identities=20% Similarity=0.341 Sum_probs=235.3
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|++.|++|+|+++++++|+|||.|++|+|||+.+...... . ......+|...|.++.++| ++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~---------~---~~~~~~~h~~~v~~v~~s~-~g 442 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYG---------V---AQRRLTGHSHFVEDVVLSS-DG 442 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSC---------E---EEEEEECCSSCEEEEEECT-TS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccc---------c---ccceecCCCCcEEEEEECC-CC
Confidence 357899999999999987778999999999999999875432100 0 0123468999999999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee---eeCCCCC
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT---LSGHRDG 192 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~---l~~h~~~ 192 (446)
++|+||+.|++|++||+.++..+..+. +.+.+.++++++.. .+|++|+.|+.|++||+........ ..+|...
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~---~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN---RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDW 519 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS---SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSC
T ss_pred CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC---CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCc
Confidence 999999999999999999998887765 45668888988753 4789999999999999876543322 2579999
Q ss_pred eEEEEEecCCC-eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccccc
Q 013274 193 IMTVEWSTSSE-WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271 (446)
Q Consensus 193 v~sv~~s~~~~-~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (446)
|.+++|+|++. ..++|++.|++|++||+++..+...
T Consensus 520 v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~------------------------------------------- 556 (694)
T 3dm0_A 520 VSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRST------------------------------------------- 556 (694)
T ss_dssp EEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEE-------------------------------------------
T ss_pred EEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEE-------------------------------------------
Confidence 99999999862 3579999999999999986543221
Q ss_pred CCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEE
Q 013274 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV 351 (446)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~ 351 (446)
..+|.+.|++++|+|+|.+|+||+.|++|++||+.+++... .+.
T Consensus 557 ---------------------------------~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~-~~~-- 600 (694)
T 3dm0_A 557 ---------------------------------LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY-SLE-- 600 (694)
T ss_dssp ---------------------------------ECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEE-CCB--
T ss_pred ---------------------------------EcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEE-Eec--
Confidence 23678889999999999999999999999999999875321 111
Q ss_pred EeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccc-------------------cceEEEEEcCCCCEEE
Q 013274 352 RLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHY-------------------EYVNCCCFSSQDQELY 412 (446)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~-------------------~~v~~~~fSpd~~~lv 412 (446)
.......++++|++..++.+....+++||+.+++.+..+..|. -.+++++||||+++|+
T Consensus 601 --~~~~v~~~~~sp~~~~l~~~~~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~ 678 (694)
T 3dm0_A 601 --ANSVIHALCFSPNRYWLCAATEHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLF 678 (694)
T ss_dssp --CSSCEEEEEECSSSSEEEEEETTEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEE
T ss_pred --CCCcEEEEEEcCCCcEEEEEcCCCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEE
Confidence 1234456889999998888888889999999988877665432 2378999999999999
Q ss_pred EeeCCCcEEEeCCCC
Q 013274 413 TGGNDRQILVWCPSR 427 (446)
Q Consensus 413 tgs~D~~v~vW~~~~ 427 (446)
|||.|++|+||++.+
T Consensus 679 sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 679 SGYTDGVIRVWGIGR 693 (694)
T ss_dssp EEETTSEEEEEEC--
T ss_pred EEcCCCeEEEEeccC
Confidence 999999999999864
No 20
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.5e-38 Score=306.21 Aligned_cols=296 Identities=17% Similarity=0.223 Sum_probs=225.8
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
...+.+|.+.|++++|+|++.++|++|+.||+|+|||+.++... .. ....+|...|.++.|+|.+
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~------------~~---~~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT------------SF---IQGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE------------EE---ECCCSTTCBEEEEEEETTE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc------------ee---eecCCcCCceeEEEeCCCC
Confidence 34567999999999999754389999999999999999865421 00 1124799999999998867
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEe-cC---CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFK-MP---GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD 191 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~ 191 (446)
+.+|++++.|++|++||+.... +..+. .. ..+.++++++. ..+|++|+.|+.|++||+ ++..+..+.+|.+
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~ 205 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSV-IQVFAKTDSWDYWYCCVDVSVS---RQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA 205 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCE-EEEEECCCCSSCCEEEEEEETT---TTEEEEEETTSEEEEEET-TSCEEEEEECSSS
T ss_pred CCEEEEEeCCCEEEEEECCCCc-eEEEeccCCCCCCeEEEEECCC---CCEEEEECCCCCEEEEEC-CCCEEEEeccCCC
Confidence 7899999999999999998644 33333 22 44788888874 358999999999999999 5778889999999
Q ss_pred CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccccc
Q 013274 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271 (446)
Q Consensus 192 ~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (446)
.|.+++|+|+++++|++++.|++|++||+++.+...
T Consensus 206 ~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~-------------------------------------------- 241 (383)
T 3ei3_B 206 KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKN-------------------------------------------- 241 (383)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTT--------------------------------------------
T ss_pred cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCccc--------------------------------------------
Confidence 999999999998668999999999999998632000
Q ss_pred CCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
. .....+|.+.|.+++|+| +|.+|++++.|++|++||+.+++.... +..
T Consensus 242 -----------------~------------~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~-~~~ 291 (383)
T 3ei3_B 242 -----------------S------------YIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQ-III 291 (383)
T ss_dssp -----------------C------------EEEEEECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSE-EEE
T ss_pred -----------------c------------eEEEecCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccc-ccc
Confidence 0 000124677899999999 999999999999999999988653211 111
Q ss_pred EE---eecCCCe-----------EEEEcCCCcEEEEeCCCceEEEEeecCceEEEecc--cccceEEEEEcCCCCEEEEe
Q 013274 351 VR---LQTSKPI-----------QLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG--HYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 351 ~~---~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~g--H~~~v~~~~fSpd~~~lvtg 414 (446)
.. ......+ .+++++++.+ .......+++||+.+++.+.++.+ |...+.+++|+||+++|++|
T Consensus 292 ~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~-s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 292 HPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL-LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT-CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred ccccccccccceEEeccCCCCceEEEecCCccc-ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence 00 0001112 2334444444 112346799999999999999987 56788889999999999999
Q ss_pred eCCCcEEEeCCCC
Q 013274 415 GNDRQILVWCPSR 427 (446)
Q Consensus 415 s~D~~v~vW~~~~ 427 (446)
+ |++|+||++++
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 7 99999999875
No 21
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=7.4e-38 Score=304.35 Aligned_cols=308 Identities=23% Similarity=0.375 Sum_probs=229.1
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccc----eEEeccccccCccccEeEEEEeecCC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRS----VFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~----~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
+|.+.|++++|+| ++++|++|+ |++++||++.++.... .+..+.. ...........+...|.++.|+| ++
T Consensus 62 ~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~-dg 135 (393)
T 1erj_A 62 DHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVA---RLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP-DG 135 (393)
T ss_dssp ECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEE---EECC-----------------CCCCBEEEEEECT-TS
T ss_pred CCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEE---EecCccccccccccccccccCCCceeEEEEEECC-CC
Confidence 6999999999997 688999976 7899999998764311 0000000 00000000112344588988887 88
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s 195 (446)
++|++|+.|++|++||+.+++.+..+. +.+.+.++++++.. .+|++++.|+.|++||++++.....+. +...+.+
T Consensus 136 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~ 211 (393)
T 1erj_A 136 KFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG---DKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTT 211 (393)
T ss_dssp SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS---SEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC---CEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEE
Confidence 999999999999999999998877765 44568888888753 478999999999999999998877775 5678999
Q ss_pred EEEec-CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 196 VEWST-SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 196 v~~s~-~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
++|+| +++ +|++|+.|++|++||++++.++..+....
T Consensus 212 ~~~~~~~~~-~l~~~s~d~~v~iwd~~~~~~~~~~~~~~----------------------------------------- 249 (393)
T 1erj_A 212 VAVSPGDGK-YIAAGSLDRAVRVWDSETGFLVERLDSEN----------------------------------------- 249 (393)
T ss_dssp EEECSTTCC-EEEEEETTSCEEEEETTTCCEEEEEC--------------------------------------------
T ss_pred EEEECCCCC-EEEEEcCCCcEEEEECCCCcEEEeecccc-----------------------------------------
Confidence 99999 555 58999999999999998765543331000
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeee--------
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV-------- 346 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~-------- 346 (446)
....+|...|.+++|+|+|.+|++|+.|++|++||+.+......
T Consensus 250 ----------------------------~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~ 301 (393)
T 1erj_A 250 ----------------------------ESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGT 301 (393)
T ss_dssp -------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------C
T ss_pred ----------------------------cCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCc
Confidence 01136788899999999999999999999999999986432100
Q ss_pred eeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcC------CCCEEEEeeCCCc
Q 013274 347 NFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS------QDQELYTGGNDRQ 419 (446)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp------d~~~lvtgs~D~~ 419 (446)
.......+......+++++++..+++++. ..+++||+.+++.+..+.+|.+.|.+++|+| ++++|+|||.|++
T Consensus 302 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 302 CEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp EEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred ceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 01111222334556788888888877654 5799999999999999999999999999986 6899999999999
Q ss_pred EEEeCCCCC
Q 013274 420 ILVWCPSRH 428 (446)
Q Consensus 420 v~vW~~~~~ 428 (446)
|+||+....
T Consensus 382 i~iW~~~~~ 390 (393)
T 1erj_A 382 ARIWKYKKI 390 (393)
T ss_dssp EEEEEEEEC
T ss_pred EEECccccc
Confidence 999987543
No 22
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=3.3e-37 Score=314.33 Aligned_cols=318 Identities=23% Similarity=0.352 Sum_probs=237.4
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|...|++++|+| ++++|++++.|++|++||.+... .....+|...|.++.++| ++.
T Consensus 257 ~~~~~~~~v~~v~~~~-d~~~l~~~~~d~~i~~w~~~~~~------------------~~~~~~h~~~v~~~~~~~-~~~ 316 (577)
T 2ymu_A 257 TLTGHSSSVNGVAFRP-DGQTIASASDDKTVKLWNRNGQL------------------LQTLTGHSSSVWGVAFSP-DGQ 316 (577)
T ss_dssp EECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSCE------------------EEEECCCSSCEEEEEECT-TSS
T ss_pred EEecCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCcE------------------EEEEecCCCCeEEEEECC-CCC
Confidence 4678999999999986 67899999999999999964311 012358999999998887 788
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEE
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVE 197 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~ 197 (446)
+|++++.|++|++||+..........+...+.++++++. ..++++|+.|+.|++||. +++.+..+.+|...|.+++
T Consensus 317 ~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~---g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~ 392 (577)
T 2ymu_A 317 TIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPD---GQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVA 392 (577)
T ss_dssp EEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCC---CCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEE
Confidence 999999999999999876655443334556788888874 458999999999999995 5677888999999999999
Q ss_pred EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCcee
Q 013274 198 WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVR 277 (446)
Q Consensus 198 ~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (446)
|+|++++ |++++.|+.|++||.. ++.+..+..+...+. .+.
T Consensus 393 ~s~dg~~-l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~-------------------------------------~~~ 433 (577)
T 2ymu_A 393 FSPDGQT-IASASDDKTVKLWNRN-GQLLQTLTGHSSSVW-------------------------------------GVA 433 (577)
T ss_dssp ECTTSSC-EEEEETTSEEEEECTT-CCEEEEEECCSSCEE-------------------------------------EEE
T ss_pred ECCCCCE-EEEEeCCCEEEEEeCC-CCEEEEecCCCCCeE-------------------------------------EEE
Confidence 9999986 7899999999999964 444444433221110 000
Q ss_pred ecccceeecCCccccc--cCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeec
Q 013274 278 QSSVGRIPAKGSVRQR--LHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 355 (446)
Q Consensus 278 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~ 355 (446)
.++.....+.+..+.. +............+|...|++++|+|||++|++++.|++|++||.. ++. ...+..+.
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~----~~~~~~h~ 508 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQL----LQTLTGHS 508 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCE----EEEEECCS
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCE----EEEEeCCC
Confidence 1111111110000000 0000000112345788999999999999999999999999999964 332 12233344
Q ss_pred CCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeC
Q 013274 356 SKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWC 424 (446)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~ 424 (446)
.....++++|++.++++++. ..+++||. +++.+.++.+|.+.|++|+||||+++|+|+|.|++|++||
T Consensus 509 ~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 509 SSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 55677899999998887755 57999995 7888999999999999999999999999999999999997
No 23
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-37 Score=292.89 Aligned_cols=286 Identities=20% Similarity=0.259 Sum_probs=238.3
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
+.+|.+.|++|+|+| ++++|++|+.||.|++||+.++... ....+|...|.++.++| ++++
T Consensus 28 l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~~~~~~-~~~~ 88 (369)
T 3zwl_B 28 LTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERL-----------------GTLDGHTGTIWSIDVDC-FTKY 88 (369)
T ss_dssp EECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECT-TSSE
T ss_pred EEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhh-----------------hhhhhcCCcEEEEEEcC-CCCE
Confidence 679999999999997 6889999999999999998765321 12357999999999987 7889
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCC-----CcEEEEeCCCCc-----------e
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTED-----VQVRLCDIASGA-----------I 182 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d-----~~v~vwd~~~~~-----------~ 182 (446)
|++++.|++|++||+.+++.+..+.....+..+.+++. ..++++++.+ +.|++||++.+. .
T Consensus 89 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~ 165 (369)
T 3zwl_B 89 CVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPC---GNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEP 165 (369)
T ss_dssp EEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTT---SSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSC
T ss_pred EEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccC---CCEEEEecCCccCCCCEEEEEEecCCccceeecccccce
Confidence 99999999999999999999988888888899999885 3478888888 999999997663 3
Q ss_pred eeeeeCCCC--CeEEEEEecCCCeEEEEeeCCCcEEEEEccC-CceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 183 SQTLSGHRD--GIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 183 ~~~l~~h~~--~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
...+..|.+ .+.+++|+|+++. |++++.||.|++||+++ ......
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~------------------------------- 213 (369)
T 3zwl_B 166 IHKIITHEGLDAATVAGWSTKGKY-IIAGHKDGKISKYDVSNNYEYVDS------------------------------- 213 (369)
T ss_dssp SEEEECCTTCCCEEEEEECGGGCE-EEEEETTSEEEEEETTTTTEEEEE-------------------------------
T ss_pred eeeccCCcCccceeEEEEcCCCCE-EEEEcCCCEEEEEECCCCcEeEEE-------------------------------
Confidence 445566766 9999999999885 78999999999999986 222211
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecC
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 339 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~ 339 (446)
...|.+.|.+++|+|++.+|++++.|+.|++||+.
T Consensus 214 ---------------------------------------------~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 214 ---------------------------------------------IDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp ---------------------------------------------EECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred ---------------------------------------------EecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 12466779999999999999999999999999999
Q ss_pred cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCC---------------ceEEEEeecCceEEEecccccceEEEEE
Q 013274 340 SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT---------------AVKAFDIWSGKTCLTFRGHYEYVNCCCF 404 (446)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~d~~~~~~~~~l~gH~~~v~~~~f 404 (446)
+++... .+ . .......+++++++..+++++.. .+++||+.+++....+.+|.+.|++++|
T Consensus 249 ~~~~~~-~~---~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 323 (369)
T 3zwl_B 249 TLQVLK-KY---E-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAI 323 (369)
T ss_dssp TCCEEE-EE---E-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCceee-ee---c-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEE
Confidence 875321 11 1 23345667888888888776543 5899999999999999999999999999
Q ss_pred cCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 405 SSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 405 Spd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
+||+++|+||+.|++|+||+++..
T Consensus 324 s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 324 SPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp CTTSSEEEEEETTSEEEEEEECHH
T ss_pred CCCCCEEEEEcCCCeEEEEECccc
Confidence 999999999999999999999854
No 24
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.3e-37 Score=287.34 Aligned_cols=258 Identities=17% Similarity=0.299 Sum_probs=200.7
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-CC
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV-DT 116 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~-~~ 116 (446)
++.+|.+.|++++|+| ++++||||+.|++|+|||++.... +. ...+.+|...|.++.|.++ ++
T Consensus 4 ~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~----------~~-----~~~l~gH~~~V~~v~~s~~~~g 67 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETH----------KL-----IDTLTGHEGPVWRVDWAHPKFG 67 (297)
T ss_dssp ECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCB----------CC-----CEEECCCSSCEEEEEECCGGGC
T ss_pred eccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCc----------EE-----EEEEccccCCeEEEEecCCCcC
Confidence 4679999999999996 688999999999999999864321 00 1223689999999999754 57
Q ss_pred cEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc--eeeeeeCCCC
Q 013274 117 GLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--ISQTLSGHRD 191 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~--~~~~l~~h~~ 191 (446)
.+|+|||.|++|++||+.+++ .+..+. +...+.+++++|... ..+|++++.|+.|++||++++. ....+.+|..
T Consensus 68 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~ 146 (297)
T 2pm7_B 68 TILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY-GPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (297)
T ss_dssp SEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGG-CSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS
T ss_pred CEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCC-CcEEEEEECCCcEEEEEecCCCceeeeeeecccC
Confidence 899999999999999998764 333333 445688889887521 3579999999999999998763 2467789999
Q ss_pred CeEEEEEecCC------------CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 192 GIMTVEWSTSS------------EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 192 ~v~sv~~s~~~------------~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
.|.+++|+|+. ...|++|+.|++|++||++++.....+
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~------------------------------ 196 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL------------------------------ 196 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE------------------------------
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE------------------------------
Confidence 99999999973 235899999999999998754210000
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC---CEEEEeecCCcEEEE
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG---MYLLSAGSDSRIRLW 336 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg---~~l~sgs~D~~i~lW 336 (446)
.....+|.+.|.+|+|+|++ .+|+|++.|++|++|
T Consensus 197 ------------------------------------------~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iW 234 (297)
T 2pm7_B 197 ------------------------------------------ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIW 234 (297)
T ss_dssp ------------------------------------------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEE
T ss_pred ------------------------------------------EEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEE
Confidence 00124688899999999995 899999999999999
Q ss_pred ecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEE--ecccccceEEEEEcCCCCEEEEe
Q 013274 337 DVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLT--FRGHYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 337 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~--l~gH~~~v~~~~fSpd~~~lvtg 414 (446)
|+.+...... ... ..+|...|++++|+||+++|+++
T Consensus 235 d~~~~~~~~~------------------------------------------~~~~~~~~~~~~v~~~~~s~~g~~las~ 272 (297)
T 2pm7_B 235 TQDNEQGPWK------------------------------------------KTLLKEEKFPDVLWRASWSLSGNVLALS 272 (297)
T ss_dssp EESSTTSCCE------------------------------------------EEESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred EeCCCCCccc------------------------------------------eeeeecccCCCcEEEEEECCCCCEEEEE
Confidence 9875321000 001 13578899999999999999999
Q ss_pred eCCCcEEEeCCC
Q 013274 415 GNDRQILVWCPS 426 (446)
Q Consensus 415 s~D~~v~vW~~~ 426 (446)
+.|++|+||++.
T Consensus 273 ~~D~~v~lw~~~ 284 (297)
T 2pm7_B 273 GGDNKVTLWKEN 284 (297)
T ss_dssp ETTSCEEEEEEC
T ss_pred cCCCcEEEEEEC
Confidence 999999999875
No 25
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=5.1e-37 Score=287.80 Aligned_cols=254 Identities=15% Similarity=0.239 Sum_probs=207.2
Q ss_pred cccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEe
Q 013274 98 HEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176 (446)
Q Consensus 98 ~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd 176 (446)
.+.+|...|.++.|+| ++++|+||+.|++|++||+.++..+..+.. ...+..+.+++. ..+|++|+.|+.|++||
T Consensus 8 ~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIAR---KNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp EEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGG---GTEEEEEETTSEEEEEE
T ss_pred eecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCC---CCEEEEECCCCEEEEEE
Confidence 3468999999999987 789999999999999999999998887764 345777888774 45899999999999999
Q ss_pred CCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccC
Q 013274 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG 256 (446)
Q Consensus 177 ~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (446)
+++++.+..+.+|.+.|.+++|+|+++. |+||+.|++|++||++++..+..
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~lWd~~~~~~~~~---------------------------- 134 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPY-VLSGSDDLTVKLWNWENNWALEQ---------------------------- 134 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEEGGGTTEEEE----------------------------
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCE-EEEECCCCeEEEEECCCCcchhh----------------------------
Confidence 9999999999999999999999999885 78999999999999875422100
Q ss_pred CCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecCCcEEE
Q 013274 257 QNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSDSRIRL 335 (446)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D~~i~l 335 (446)
...+|...|.+++|+| ++.+|+||+.|++|++
T Consensus 135 -----------------------------------------------~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~i 167 (304)
T 2ynn_A 135 -----------------------------------------------TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKV 167 (304)
T ss_dssp -----------------------------------------------EECCCCSCEEEEEECTTCTTEEEEEETTSEEEE
T ss_pred -----------------------------------------------hhcccCCcEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 1236778899999999 6789999999999999
Q ss_pred EecCcCceeeeeeeEEEeecCCCeEEEEcC--CCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 336 WDVESGRNTLVNFETVRLQTSKPIQLATTQ--DPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 336 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
||+.+...... + ...+......+.+.+ ++.++++++ ...+++||+.+++.+.++.+|...|++++|+|++++|+
T Consensus 168 wd~~~~~~~~~-~--~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 168 WSLGQSTPNFT-L--TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EETTCSSCSEE-E--ECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EECCCCCccce-e--ccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 99987543221 1 111112233445554 555666654 46899999999999999999999999999999999999
Q ss_pred EeeCCCcEEEeCCCCCCCCCcC
Q 013274 413 TGGNDRQILVWCPSRHISDGVD 434 (446)
Q Consensus 413 tgs~D~~v~vW~~~~~~~~~~~ 434 (446)
|||.|++|+||++.+......+
T Consensus 245 s~s~Dg~i~iWd~~~~~~~~~~ 266 (304)
T 2ynn_A 245 SGSEDGTLKIWNSSTYKVEKTL 266 (304)
T ss_dssp EEETTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCeEEEEECCCCceeeec
Confidence 9999999999999876644333
No 26
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.8e-37 Score=300.98 Aligned_cols=293 Identities=15% Similarity=0.213 Sum_probs=219.7
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|++.|++|+|+|.++++|+||+.||+|+|||+.+...... .+.. ...+|...|.++.++| ++.+|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~------~~~~------~~~~h~~~v~~~~~~~-~~~~l 126 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEV------YSSS------LTYDCSSTVTQITMIP-NFDAF 126 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCC------CSCS------EEEECSSCEEEEEECT-TSSEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcc------ccee------eeccCCCCEEEEEEeC-CCCEE
Confidence 789999999999974678999999999999999876221000 0000 1125889999999987 78899
Q ss_pred EEEeCCCeEEEEECC---CCeeeEEEecCCceEEeeecc-------------CCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 120 VTGSYDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSP-------------LAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~---~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
++|+.|++|++||++ +++.+...... .+..+.+.+ ...+..++++|+.|+.|++||+++++.+
T Consensus 127 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~ 205 (437)
T 3gre_A 127 AVSSKDGQIIVLKVNHYQQESEVKFLNCE-CIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERL 205 (437)
T ss_dssp EEEETTSEEEEEEEEEEEETTEEEEEEEE-EEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEE
T ss_pred EEEeCCCEEEEEEeccccCCceeeccccc-eeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeee
Confidence 999999999999994 55544433321 233333332 2234678999999999999999999999
Q ss_pred eeeeC--CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 184 QTLSG--HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 184 ~~l~~--h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
..+.+ |.+.|.+++|+|++++ |++|+.||+|++||++++.++..+.
T Consensus 206 ~~~~~~~h~~~v~~~~~s~~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~------------------------------- 253 (437)
T 3gre_A 206 QIIENSPRHGAVSSICIDEECCV-LILGTTRGIIDIWDIRFNVLIRSWS------------------------------- 253 (437)
T ss_dssp EEEECCGGGCCEEEEEECTTSCE-EEEEETTSCEEEEETTTTEEEEEEB-------------------------------
T ss_pred EEEccCCCCCceEEEEECCCCCE-EEEEcCCCeEEEEEcCCccEEEEEe-------------------------------
Confidence 99988 8999999999999875 7899999999999998765543321
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEE----ccCCCEEEEeecCCcEEEEe
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKV----TEDGMYLLSAGSDSRIRLWD 337 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~f----s~dg~~l~sgs~D~~i~lWd 337 (446)
..|..+|.+++| +|++.+|++|+.|++|++||
T Consensus 254 --------------------------------------------~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd 289 (437)
T 3gre_A 254 --------------------------------------------FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWN 289 (437)
T ss_dssp --------------------------------------------CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEE
T ss_pred --------------------------------------------cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEE
Confidence 134456888855 45788999999999999999
Q ss_pred cCcCceeeeeeeEE-------Ee----------------ecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEec
Q 013274 338 VESGRNTLVNFETV-------RL----------------QTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFR 393 (446)
Q Consensus 338 ~~~~~~~~~~~~~~-------~~----------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~ 393 (446)
+.+++.... +... .+ +......+++. ++..+++++ +..+++||+.+++....+.
T Consensus 290 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 367 (437)
T 3gre_A 290 FVKGHCQYA-FINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVI 367 (437)
T ss_dssp TTTTEEEEE-EESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEE
T ss_pred cCCCcEEEE-EEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEe
Confidence 998753221 1100 00 11123446666 556666665 4689999999888777666
Q ss_pred c-------------------------------------cccceEEEEEcCC--CCEEEEeeCCCcEEEeC
Q 013274 394 G-------------------------------------HYEYVNCCCFSSQ--DQELYTGGNDRQILVWC 424 (446)
Q Consensus 394 g-------------------------------------H~~~v~~~~fSpd--~~~lvtgs~D~~v~vW~ 424 (446)
+ |.+.|++++|+++ +.+|+||+.||+|+||+
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 368 SPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp CC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 5 8999999999998 88999999999999995
No 27
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.6e-36 Score=292.93 Aligned_cols=300 Identities=13% Similarity=0.109 Sum_probs=236.2
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV- 114 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~- 114 (446)
..++.+|.+.|++|+|+| ++|++|+.||+|++||+++..... ....+ ....+|...|.++.|+|.
T Consensus 9 ~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~------~~~~~-----~~~~~h~~~v~~~~~~~~~ 74 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNEN------PKDKS-----YSHFVHKSGLHHVDVLQAI 74 (397)
T ss_dssp EEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCC------GGGGE-----EEEECCTTCEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCccccc------CCCcc-----eEEecCCCcEEEEEEeccc
Confidence 345789999999999985 689999999999999998754211 01111 122479999999999983
Q ss_pred --CC---cEEEEEeCCCeEEEEECCCCee-----eEEEecC------CceEEeeeccCC-CCceE-EEEeeCCCcEEEEe
Q 013274 115 --DT---GLFVTGSYDHYVKVWDTNCTRV-----VMNFKMP------GKVYRTAMSPLA-ASHML-IAAGTEDVQVRLCD 176 (446)
Q Consensus 115 --~~---~~l~s~s~D~~i~iWd~~~~~~-----~~~~~~~------~~~~~~~~~~~~-~~~~~-lasgs~d~~v~vwd 176 (446)
++ .+|++++.|++|++||+.+++. +..+... +.+.++.+++.. ++..+ |++++.|+.|++||
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 154 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEe
Confidence 27 8999999999999999988775 5655543 678888888211 13456 99999999999999
Q ss_pred CCC------Cceee-----ee-------eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccC
Q 013274 177 IAS------GAISQ-----TL-------SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGR 238 (446)
Q Consensus 177 ~~~------~~~~~-----~l-------~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~ 238 (446)
+++ +..+. .+ ..|...|.+++|+|++ .|++++.||.|++||++++..+..+..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~~~~~~~~~------- 225 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTLRPLYNFES------- 225 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTTEEEEEEEC-------
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCCceeEEEec-------
Confidence 998 66665 77 4489999999999998 578999999999999987654433210
Q ss_pred CCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccccccc---ccCeEEE
Q 013274 239 RPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAH---YGAVTGL 315 (446)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h---~~~v~~l 315 (446)
..+| ...|.++
T Consensus 226 ------------------------------------------------------------------~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 226 ------------------------------------------------------------------QHSMINNSNSIRSV 239 (397)
T ss_dssp ------------------------------------------------------------------CC---CCCCCEEEE
T ss_pred ------------------------------------------------------------------cccccccCCccceE
Confidence 0125 6679999
Q ss_pred EEccCCCEEEEeecC---CcEEEEecCcCceeeeeeeEEEe-------------ecCCCeEEEEcCCCcEEEEeCC-Cce
Q 013274 316 KVTEDGMYLLSAGSD---SRIRLWDVESGRNTLVNFETVRL-------------QTSKPIQLATTQDPAVVFVPCM-TAV 378 (446)
Q Consensus 316 ~fs~dg~~l~sgs~D---~~i~lWd~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~-~~~ 378 (446)
+|+|++.+|++++.| +.|++||+.+++... .+.. +......+++++++..+++++. ..+
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 315 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGCITLYETEFGERIG----SLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL 315 (397)
T ss_dssp EECSSTTEEEEEEEETTEEEEEEEETTTCCEEE----EECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EECCCCCEEEEEecCCCCceEEEEECCCCcccc----eeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE
Confidence 999999999999999 999999998875321 1111 3345567889999988888754 579
Q ss_pred EEEEeecCceEEEec------cc---------------ccceEEEEEcCCC----------CEEEEeeCCCcEEEeCCCC
Q 013274 379 KAFDIWSGKTCLTFR------GH---------------YEYVNCCCFSSQD----------QELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 379 ~~~d~~~~~~~~~l~------gH---------------~~~v~~~~fSpd~----------~~lvtgs~D~~v~vW~~~~ 427 (446)
++||+.+++.+..+. +| ...|++++|+||+ ++|++|+.|+.|++|++.+
T Consensus 316 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~~ 395 (397)
T 1sq9_A 316 RFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREAG 395 (397)
T ss_dssp EEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEEC
T ss_pred EEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcCC
Confidence 999999999999999 88 9999999999998 7999999999999999865
Q ss_pred C
Q 013274 428 H 428 (446)
Q Consensus 428 ~ 428 (446)
+
T Consensus 396 g 396 (397)
T 1sq9_A 396 G 396 (397)
T ss_dssp -
T ss_pred C
Confidence 4
No 28
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=5.2e-36 Score=286.84 Aligned_cols=325 Identities=13% Similarity=0.241 Sum_probs=236.5
Q ss_pred eEeCCCccceeEEEeecC---CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 37 EIVSPHKGSINSLQVDLT---EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~---~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
.+..+|.+.|++|+|+|. +...+++++.|+.|++||+.++... ..........|...|.++.|+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~------------~~~~~~~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI------------RLLQSYVDADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE------------EEEEEEECSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE------------EeeeeccccCCCCcEEEEEecc
Confidence 356699999999999973 3456777777789999999865421 1111111234778899999988
Q ss_pred cC---CcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee---
Q 013274 114 VD---TGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL--- 186 (446)
Q Consensus 114 ~~---~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l--- 186 (446)
.. +.+|++|+.|++|++||+.+++.+..+. +.+.+..+.+++. +..+|++++.|+.|++||+++++....+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~ 157 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPR--DPNLLLSVSKDHALRLWNIQTDTLVAIFGGV 157 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSS--CTTEEEEEETTSCEEEEETTTTEEEEEECST
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCC--CCCEEEEEeCCCeEEEEEeecCeEEEEeccc
Confidence 42 5699999999999999999999888777 5667888888873 2358999999999999999999888887
Q ss_pred eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCc
Q 013274 187 SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAP 266 (446)
Q Consensus 187 ~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (446)
.+|...|.+++|+|+++. |++++.||.|++||++++.....+..... ....
T Consensus 158 ~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~i~d~~~~~~~~~~~~~~~----------------~~~~------------ 208 (366)
T 3k26_A 158 EGHRDEVLSADYDLLGEK-IMSCGMDHSLKLWRINSKRMMNAIKESYD----------------YNPN------------ 208 (366)
T ss_dssp TSCSSCEEEEEECTTSSE-EEEEETTSCEEEEESCSHHHHHHHHHHHT----------------CCGG------------
T ss_pred ccccCceeEEEECCCCCE-EEEecCCCCEEEEECCCCccccccceeEE----------------ecCC------------
Confidence 789999999999999875 78999999999999987643322211000 0000
Q ss_pred cccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceee-
Q 013274 267 QKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL- 345 (446)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~- 345 (446)
+..... .... .. ........+|.+.|.+++|+ +.+|++++.|+.|++||+.+.....
T Consensus 209 ------~~~~~~---------~~~~--~~---~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~ 266 (366)
T 3k26_A 209 ------KTNRPF---------ISQK--IH---FPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDID 266 (366)
T ss_dssp ------GCSSCC---------CCEE--EC---CCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGG
T ss_pred ------CCcccc---------ccee--ec---cCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCcccccc
Confidence 000000 0000 00 00001124588899999998 7799999999999999998764311
Q ss_pred ---------eeeeEEEeecCCCeEEEEcCC--CcEEEEeCC-CceEEEEeecCc----eEEEeccc--ccceEEEEEcCC
Q 013274 346 ---------VNFETVRLQTSKPIQLATTQD--PAVVFVPCM-TAVKAFDIWSGK----TCLTFRGH--YEYVNCCCFSSQ 407 (446)
Q Consensus 346 ---------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~~d~~~~~----~~~~l~gH--~~~v~~~~fSpd 407 (446)
........+......++++++ +..+++++. ..+++||+.+++ ....+.+| ...|++++|+||
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 346 (366)
T 3k26_A 267 KIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRD 346 (366)
T ss_dssp GCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTT
T ss_pred ccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCC
Confidence 111222223334555677777 888887765 679999998875 44588888 799999999999
Q ss_pred CCEEEEeeCCCcEEEeCCC
Q 013274 408 DQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 408 ~~~lvtgs~D~~v~vW~~~ 426 (446)
+++|++|+.|+.|++|++.
T Consensus 347 ~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 347 SSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSEEEEEETTSEEEEEEC-
T ss_pred CCeEEEEeCCCEEEEEEec
Confidence 9999999999999999975
No 29
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=2.4e-37 Score=291.74 Aligned_cols=259 Identities=19% Similarity=0.335 Sum_probs=195.8
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV- 114 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~- 114 (446)
+.++.+|.+.|++++|+| ++++|||||.|++|+|||++++... . ...+.+|...|.++.|+++
T Consensus 6 ~~~~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~----------~-----~~~l~gH~~~V~~v~~~~~~ 69 (316)
T 3bg1_A 6 NTVDTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQI----------L-----IADLRGHEGPVWQVAWAHPM 69 (316)
T ss_dssp --------CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEE----------E-----EEEEECCSSCEEEEEECCGG
T ss_pred eeecccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcE----------E-----EEEEcCCCccEEEEEeCCCC
Confidence 345679999999999997 6789999999999999998754210 0 1123589999999999753
Q ss_pred CCcEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce---eeeeeC
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI---SQTLSG 188 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~---~~~l~~ 188 (446)
++.+|+|||.|++|++||+.++. .+..+. +.+.+.+++++|... ..+|++|+.|+.|++||++++.. ...+.+
T Consensus 70 ~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~-g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~ 148 (316)
T 3bg1_A 70 YGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDY-GLILACGSSDGAISLLTYTGEGQWEVKKINNA 148 (316)
T ss_dssp GSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTT-CSCEEEECSSSCEEEEEECSSSCEEECCBTTS
T ss_pred CCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCC-CcEEEEEcCCCCEEEEecCCCCCcceeeeecc
Confidence 57899999999999999998764 333333 445678888988532 35789999999999999987632 456778
Q ss_pred CCCCeEEEEEecCC-----------------CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 189 HRDGIMTVEWSTSS-----------------EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 189 h~~~v~sv~~s~~~-----------------~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|...|.+++|+|+. + .|++|+.|++|++||++.......+
T Consensus 149 h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sgs~D~~v~lWd~~~~~~~~~~---------------------- 205 (316)
T 3bg1_A 149 HTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIK-RFASGGCDNLIKLWKEEEDGQWKEE---------------------- 205 (316)
T ss_dssp SSSCBCCCEECCCCCC------CCSCCCCCCC-BEECCBTTSBCCEEEECTTSCEEEE----------------------
T ss_pred ccCCcceEEEccccCCccccccccccCccccc-eEEEecCCCeEEEEEeCCCCcccee----------------------
Confidence 99999999999973 3 4799999999999998643211000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC----CEEEEe
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG----MYLLSA 327 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg----~~l~sg 327 (446)
....+|.++|.+++|+|++ .+|+||
T Consensus 206 ---------------------------------------------------~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 206 ---------------------------------------------------QKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp ---------------------------------------------------ECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred ---------------------------------------------------eecccCCCceEEEEecCCCCCCCceEEEE
Confidence 0124688899999999987 889999
Q ss_pred ecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCC
Q 013274 328 GSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQ 407 (446)
Q Consensus 328 s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd 407 (446)
+.|++|++||+.+..... .....+.+|.+.|++++|+|+
T Consensus 235 s~D~~v~iw~~~~~~~~~-----------------------------------------~~~~~~~~~~~~v~~v~~sp~ 273 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNT-----------------------------------------WSPKLLHKFNDVVWHVSWSIT 273 (316)
T ss_dssp ETTCEEEEEECSSTTCCC-----------------------------------------CBCCEEEECSSCEEEEEECTT
T ss_pred cCCCeEEEEEccCccccc-----------------------------------------hhhhhhhcCCCcEEEEEEcCC
Confidence 999999999987531100 000123468899999999999
Q ss_pred CCEEEEeeCCCcEEEeCCC
Q 013274 408 DQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 408 ~~~lvtgs~D~~v~vW~~~ 426 (446)
+++|++|+.|++|+||+..
T Consensus 274 g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 274 ANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp TCCEEEEESSSCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEEC
Confidence 9999999999999999875
No 30
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.8e-36 Score=290.23 Aligned_cols=296 Identities=9% Similarity=0.076 Sum_probs=212.3
Q ss_pred cceeEEEeecCCCCEEEEeeCCC-------cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 44 GSINSLQVDLTEERYLLSGASDS-------SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg-------~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
-+|++++|+| ++++||+||.|. +|++|++....... ...........+.+|...|.++.+. +
T Consensus 15 ~PV~sv~fs~-dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~-------~~~~~~~~~~~l~~~~~~v~s~~~~---~ 83 (365)
T 4h5i_A 15 YPAYGAKFLN-NDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTE-------KEQFHILSEFALEDNDDSPTAIDAS---K 83 (365)
T ss_dssp SCEEEEEEEE-TTEEEEEEECCSSSSSCCEEEEEEEECTTSSSH-------HHHEEEEEEEECCTTSCCCCEEEEE---T
T ss_pred CCEEEEEEeC-CCcEEEEECCCccccCCCCEEEEEEEcCCCcce-------eeeeeeeeEEEccCCCCceEEEEeC---C
Confidence 4799999997 689999998755 49999987653211 0011111112345777788776543 4
Q ss_pred cEEEE-----------EeCCCeEEEEECCCCeeeEE----Eec------CCceEEeeeccCCCCceEEEEeeCCCcEEEE
Q 013274 117 GLFVT-----------GSYDHYVKVWDTNCTRVVMN----FKM------PGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175 (446)
Q Consensus 117 ~~l~s-----------~s~D~~i~iWd~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~lasgs~d~~v~vw 175 (446)
+.+++ ++.|+++|+|++........ ... ...+..++|+|++. ...+|+++.|+.|+||
T Consensus 84 ~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~-~la~as~~~d~~i~iw 162 (365)
T 4h5i_A 84 GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGT-VAAIASSKVPAIMRII 162 (365)
T ss_dssp TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSS-CEEEEESCSSCEEEEE
T ss_pred CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCC-EEEEEECCCCCEEEEe
Confidence 45554 45688899999765432211 111 12256678888643 1234566789999999
Q ss_pred eCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 176 DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 176 d~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
|+++++++..+. |.+.|.+|+|+|++++ +++++. +.+++|+..++.+....
T Consensus 163 d~~~~~~~~~~~-~~~~V~~v~fspdg~~-l~s~s~-~~~~~~~~~~~~~~~~~-------------------------- 213 (365)
T 4h5i_A 163 DPSDLTEKFEIE-TRGEVKDLHFSTDGKV-VAYITG-SSLEVISTVTGSCIARK-------------------------- 213 (365)
T ss_dssp ETTTTEEEEEEE-CSSCCCEEEECTTSSE-EEEECS-SCEEEEETTTCCEEEEE--------------------------
T ss_pred ECCCCcEEEEeC-CCCceEEEEEccCCce-EEeccc-eeEEEEEeccCcceeee--------------------------
Confidence 999999888876 7788999999999985 678775 55677766554321110
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC----
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS---- 331 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~---- 331 (446)
...+|...|++++|+|+|+++++++.|+
T Consensus 214 ------------------------------------------------~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~ 245 (365)
T 4h5i_A 214 ------------------------------------------------TDFDKNWSLSKINFIADDTVLIAASLKKGKGI 245 (365)
T ss_dssp ------------------------------------------------CCCCTTEEEEEEEEEETTEEEEEEEESSSCCE
T ss_pred ------------------------------------------------ecCCCCCCEEEEEEcCCCCEEEEEecCCccee
Confidence 0124666799999999999999999988
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEE-ecccccceEEEEEcCCCC
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLT-FRGHYEYVNCCCFSSQDQ 409 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~-l~gH~~~v~~~~fSpd~~ 409 (446)
.+++||+............+..+......++++|++.++++++. ..+++||+.+++.+.+ +.+|.+.|++|+|||||+
T Consensus 246 ~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~ 325 (365)
T 4h5i_A 246 VLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDST 325 (365)
T ss_dssp EEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC
T ss_pred EEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCC
Confidence 68899987764433222223333345567899999999998765 5899999999998887 489999999999999999
Q ss_pred EEEEeeCCCcEEEeCCCCC
Q 013274 410 ELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 410 ~lvtgs~D~~v~vW~~~~~ 428 (446)
+|||||.|++||||+++..
T Consensus 326 ~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 326 YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSEEEEEECCTT
T ss_pred EEEEEeCCCeEEEEEcCCC
Confidence 9999999999999998644
No 31
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-37 Score=306.47 Aligned_cols=299 Identities=9% Similarity=0.030 Sum_probs=208.2
Q ss_pred eCCCccceeEEEeecC-----CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 39 VSPHKGSINSLQVDLT-----EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~-----~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
+.+|.+.|++|+|+|. ++.+|||||.||+|+|||+.++...... ......+. ....+|...|+++.|++
T Consensus 203 l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~-~~~~~~p~-----~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 203 IVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV-FKMCEKPS-----LTLSLADSLITTFDFLS 276 (524)
T ss_dssp EEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE-EECCCSCS-----EEECCTTTCEEEEEESS
T ss_pred EEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc-ceeecCce-----EEEEcCCCCEEEEEecC
Confidence 4578899999999985 2579999999999999999765321000 00000011 12358999999999986
Q ss_pred cCCcEEEEEeCCCeEEEEECCCCe-eeEEEe-cCCceEEee--eccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCTR-VVMNFK-MPGKVYRTA--MSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH 189 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~~-~~~~~~-~~~~~~~~~--~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h 189 (446)
+ .+|++|+.|++|++||+.++. +...+. +.+.+.+++ +.+.. ..+||+|+.|++|+|||+++++++..+.+|
T Consensus 277 -~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g--~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 277 -P-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFE--DTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp -S-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTS--CCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred -C-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCC--CeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 3 489999999999999998763 333343 456677773 34321 158999999999999999998888888877
Q ss_pred CC--CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 190 RD--GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 190 ~~--~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
.. .|.+|+|+|+++. +++++.|++|++||++++.++..
T Consensus 353 ~~~~~v~~v~fsp~~~~-l~s~~~d~tv~lwd~~~~~~~~~--------------------------------------- 392 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIYS-YIYSDGASSLRAVPSRAAFAVHP--------------------------------------- 392 (524)
T ss_dssp CSCCSCCCEEEETTTTE-EEEECSSSEEEEEETTCTTCCEE---------------------------------------
T ss_pred cccCcccceEeCCCcCe-EEEeCCCCcEEEEECccccccee---------------------------------------
Confidence 64 5899999999885 78999999999999986543221
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
..+|.+.|++|+|+|+|.+|+||+.|++|++||+..+- +..
T Consensus 393 -------------------------------------l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~--~~~ 433 (524)
T 2j04_B 393 -------------------------------------LVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRL--LHG 433 (524)
T ss_dssp -------------------------------------EEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST--TTC
T ss_pred -------------------------------------eecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh--ccc
Confidence 23688899999999999999999999999999986531 111
Q ss_pred eeEE-EeecC-CCeEEEEcCCCcEEEEeCCCceEEEEee-cCceEEEecccccceEEEEEcCCC---CEEEEeeCCCcEE
Q 013274 348 FETV-RLQTS-KPIQLATTQDPAVVFVPCMTAVKAFDIW-SGKTCLTFRGHYEYVNCCCFSSQD---QELYTGGNDRQIL 421 (446)
Q Consensus 348 ~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~~~~~~~l~gH~~~v~~~~fSpd~---~~lvtgs~D~~v~ 421 (446)
.... ..... ....++++|++.++... +..++|+.. ++..+.++.+|...|++|+|||++ .+|++|+.||+||
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~g~~~~~~--~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vr 511 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIKDDKYRID--SSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLT 511 (524)
T ss_dssp C------CCCCEEEECBCCSSSCEEEEC--CCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEE
T ss_pred cccCccceeeeEEEEeccCCCCCeEEcc--CCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEE
Confidence 0000 00000 12255677776644321 222233221 467788999999999999999996 4999999999999
Q ss_pred EeCCCCC
Q 013274 422 VWCPSRH 428 (446)
Q Consensus 422 vW~~~~~ 428 (446)
||++...
T Consensus 512 lw~l~~~ 518 (524)
T 2j04_B 512 LEYLSLE 518 (524)
T ss_dssp EEECSCC
T ss_pred EEEcccc
Confidence 9998754
No 32
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.3e-35 Score=283.28 Aligned_cols=298 Identities=12% Similarity=0.142 Sum_probs=228.1
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeC---CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGAS---DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~---Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
.++.+|.+.|++|+|+|++..++++|+. |++|+|||++++... . ....+|...|.++.|+|
T Consensus 12 ~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~----------~------~~~~~~~~~v~~~~~~~ 75 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK----------L------LREIEKAKPIKCGTFGA 75 (357)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE----------E------EEEEEESSCEEEEECTT
T ss_pred hhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc----------c------eeeecccCcEEEEEEcC
Confidence 4467899999999999865567778876 999999999865321 0 01136888999999988
Q ss_pred cC--CcEEEEEeCCCeEEEEECCCCe-eeEEEe-cCCceEEeeecc---CCCCceEEEEeeCCCcEEEEeCCCCc-eeee
Q 013274 114 VD--TGLFVTGSYDHYVKVWDTNCTR-VVMNFK-MPGKVYRTAMSP---LAASHMLIAAGTEDVQVRLCDIASGA-ISQT 185 (446)
Q Consensus 114 ~~--~~~l~s~s~D~~i~iWd~~~~~-~~~~~~-~~~~~~~~~~~~---~~~~~~~lasgs~d~~v~vwd~~~~~-~~~~ 185 (446)
.. +.+|++|+.|++|++||+.+++ .+..+. +.+.+.++.+.+ +.++..+|++++.|+.|++||++++. ....
T Consensus 76 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~ 155 (357)
T 3i2n_A 76 TSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVAN 155 (357)
T ss_dssp CCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEE
T ss_pred CCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCccee
Confidence 43 6899999999999999999887 666655 445577775542 33455689999999999999999987 6777
Q ss_pred eeCCCC----CeEEEE----EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 186 LSGHRD----GIMTVE----WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 186 l~~h~~----~v~sv~----~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
+..|.+ .+.++. |+|+++. |++++.||.|++||++++.+..
T Consensus 156 ~~~~~~~~~~~v~~~~~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~------------------------------ 204 (357)
T 3i2n_A 156 MEPVQGENKRDCWTVAFGNAYNQEERV-VCAGYDNGDIKLFDLRNMALRW------------------------------ 204 (357)
T ss_dssp ECCCTTSCCCCEEEEEEECCCC-CCCE-EEEEETTSEEEEEETTTTEEEE------------------------------
T ss_pred ccccCCCCCCceEEEEEEeccCCCCCE-EEEEccCCeEEEEECccCceee------------------------------
Confidence 766655 899998 6778774 7899999999999998754211
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc---CCCEEEEeecCCcEE
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE---DGMYLLSAGSDSRIR 334 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~---dg~~l~sgs~D~~i~ 334 (446)
...|...|.+++|+| ++.+|++|+.|+.|+
T Consensus 205 -----------------------------------------------~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~ 237 (357)
T 3i2n_A 205 -----------------------------------------------ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFH 237 (357)
T ss_dssp -----------------------------------------------EEECSSCEEEEEESCSSSSCCEEEEEESTTEEE
T ss_pred -----------------------------------------------ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEE
Confidence 123556799999999 999999999999999
Q ss_pred EEecCcCceeee-eeeEEEeecCCCeEEEEcCCCc-EEEEeC-CCceEEEEeecC-------------------ceEEEe
Q 013274 335 LWDVESGRNTLV-NFETVRLQTSKPIQLATTQDPA-VVFVPC-MTAVKAFDIWSG-------------------KTCLTF 392 (446)
Q Consensus 335 lWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~d~~~~-------------------~~~~~l 392 (446)
+||+.+++.... .......+......++++|++. ++++++ ...+++||+.++ +.+..+
T Consensus 238 i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 317 (357)
T 3i2n_A 238 VFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNV 317 (357)
T ss_dssp EEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEE
T ss_pred EEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeecc
Confidence 999987543211 1111123344556788899877 566554 468999999754 356789
Q ss_pred cccccceEEEEEcCCCCEEE-EeeCCCcEEEeCCCCC
Q 013274 393 RGHYEYVNCCCFSSQDQELY-TGGNDRQILVWCPSRH 428 (446)
Q Consensus 393 ~gH~~~v~~~~fSpd~~~lv-tgs~D~~v~vW~~~~~ 428 (446)
.+|.+.|++++|+|++++|+ ||+.|+.|+||++...
T Consensus 318 ~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 318 TLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC-
T ss_pred ccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCc
Confidence 99999999999999999998 8999999999998753
No 33
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-35 Score=284.80 Aligned_cols=307 Identities=16% Similarity=0.189 Sum_probs=230.3
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
+++.|.+.|++++|+| ++++|++|+.|++|++||++++.. .. .....+|...|.++.++| +++
T Consensus 3 ~~~~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~----------~~-----~~~~~~h~~~v~~~~~~~-~~~ 65 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKW----------VQ-----VHELKEHNGQVTGVDWAP-DSN 65 (372)
T ss_dssp EEESCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEE----------EE-----EEEEECCSSCEEEEEEET-TTT
T ss_pred eecccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcE----------Ee-----eeeecCCCCcccEEEEeC-CCC
Confidence 4567999999999997 678999999999999999876420 00 112347999999999987 788
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEe---cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce---ee-eeeCCC
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFK---MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI---SQ-TLSGHR 190 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~---~~-~l~~h~ 190 (446)
+|++++.|++|++||+.+++....+. +...+.++.+++. ..+|++++.|+.|++||++.+.. .. ...+|.
T Consensus 66 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~ 142 (372)
T 1k8k_C 66 RIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN---EKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIR 142 (372)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT---SSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCC
T ss_pred EEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC---CCEEEEEeCCCEEEEEEecCCCcceeeeeeecccC
Confidence 99999999999999998887554443 4456788888874 35899999999999999998763 33 336789
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
..|.+++|+|+++. |++++.||.|++||++....-. . .. . .. .....
T Consensus 143 ~~i~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~-------~----~~-----------------~--~~--~~~~~ 189 (372)
T 1k8k_C 143 STVLSLDWHPNSVL-LAAGSCDFKCRIFSAYIKEVEE-------R----PA-----------------P--TP--WGSKM 189 (372)
T ss_dssp SCEEEEEECTTSSE-EEEEETTSCEEEEECCCTTTSC-------C----CC-----------------C--BT--TBSCC
T ss_pred CCeeEEEEcCCCCE-EEEEcCCCCEEEEEcccccccc-------c----cc-----------------c--cc--ccccc
Confidence 99999999999875 7899999999999986432100 0 00 0 00 00000
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
. .+ .......+|.+.|.+++|+|++.+|++++.|+.|++||+.+++... .
T Consensus 190 ~---------------~~-----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~----~ 239 (372)
T 1k8k_C 190 P---------------FG-----------ELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVA----T 239 (372)
T ss_dssp C---------------TT-----------CEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEE----E
T ss_pred c---------------hh-----------hheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeE----E
Confidence 0 00 0001123678889999999999999999999999999999875321 2
Q ss_pred EEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeec--Cc--------------------------------eE------E
Q 013274 351 VRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS--GK--------------------------------TC------L 390 (446)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~--~~--------------------------------~~------~ 390 (446)
+..+......+++++++.+++++....+++|++.+ ++ .. .
T Consensus 240 ~~~~~~~v~~~~~~~~~~~l~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (372)
T 1k8k_C 240 LASETLPLLAVTFITESSLVAAGHDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGA 319 (372)
T ss_dssp EECSSCCEEEEEEEETTEEEEEETTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------C
T ss_pred EccCCCCeEEEEEecCCCEEEEEeCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccc
Confidence 22233355678889999988888778999999987 42 00 2
Q ss_pred Ee-cccccceEEEEEc-CCC---CEEEEeeCCCcEEEeCCCC
Q 013274 391 TF-RGHYEYVNCCCFS-SQD---QELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 391 ~l-~gH~~~v~~~~fS-pd~---~~lvtgs~D~~v~vW~~~~ 427 (446)
.+ .+|.+.|++++|+ +++ ++|+|||.|++|++|++..
T Consensus 320 ~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~~~~ 361 (372)
T 1k8k_C 320 GLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVRS 361 (372)
T ss_dssp CCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEEHHH
T ss_pred cccccccCCcceeEEecCCCcceeeEEEecCCCceEEEEecC
Confidence 23 5999999999966 676 9999999999999998753
No 34
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5e-35 Score=298.19 Aligned_cols=320 Identities=21% Similarity=0.346 Sum_probs=236.4
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|.+++|+| ++++|++++.|++|++||.+... + ....+|...|.++.+.| ++.
T Consensus 216 ~~~~~~~~v~~~~~s~-dg~~l~~~~~d~~i~~w~~~~~~-------------~-----~~~~~~~~~v~~v~~~~-d~~ 275 (577)
T 2ymu_A 216 TLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQL-------------L-----QTLTGHSSSVNGVAFRP-DGQ 275 (577)
T ss_dssp EEECCSSCEEEEEECT-TSSCEEEEETTSCEEEECTTSCE-------------E-----EEECCCSSCEEEEEECT-TSS
T ss_pred EEecCCCCEEEEEECC-CCCEEEEEeCCCEEEEEeCCCCE-------------E-----EEEecCCCCEEEEEEcC-CCC
Confidence 4568999999999997 67889999999999999964211 0 12357889999998886 788
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEE
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv 196 (446)
++++++.|++|++||... +.+..+. +.+.+..+++++. ..++++++.|+.|++||+... .+..+.+|...|.++
T Consensus 276 ~l~~~~~d~~i~~w~~~~-~~~~~~~~h~~~v~~~~~~~~---~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~ 350 (577)
T 2ymu_A 276 TIASASDDKTVKLWNRNG-QLLQTLTGHSSSVWGVAFSPD---GQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGV 350 (577)
T ss_dssp EEEEEETTSCEEEEETTS-CEEEEECCCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEE
T ss_pred EEEEEeCCCEEEEEeCCC-cEEEEEecCCCCeEEEEECCC---CCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEE
Confidence 999999999999999764 4444443 4556788888874 458999999999999998654 556788999999999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
+|+|+++. +++++.|+.|++||. ++.++..+..+...+. . +
T Consensus 351 ~~s~~g~~-l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~--------~-----------------------------~ 391 (577)
T 2ymu_A 351 AFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHSSSVR--------G-----------------------------V 391 (577)
T ss_dssp EECTTSSE-EEEEETTSEEEEEET-TCCEEEEEECCSSCEE--------E-----------------------------E
T ss_pred EECCCCCE-EEEEeCCCEEEEEcC-CCCEEEEecCCCCCeE--------E-----------------------------E
Confidence 99999985 789999999999995 4455554433222110 0 0
Q ss_pred eecccceeecCCcccc--ccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 277 RQSSVGRIPAKGSVRQ--RLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
..++.+...+.+..+. .+............+|...|++++|+||+++|++++.|++|++||+... . +..+..+
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~~-~----~~~~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNGQ-L----LQTLTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC-E----EEEEECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCCC-E----EEEEcCC
Confidence 0011111100000000 0000000111234578899999999999999999999999999997542 1 1222333
Q ss_pred cCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 355 TSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
......++++|++.++++++. ..+++|+. +++.+..+.+|.+.|++|+||||+++|+|++.|++|+||+.+.
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~~ 539 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNG 539 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTS
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCCC
Confidence 445567899999999888755 57999995 7888999999999999999999999999999999999999754
No 35
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-35 Score=289.31 Aligned_cols=247 Identities=20% Similarity=0.374 Sum_probs=207.9
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
..+|...|+++.|+| ++.+|+||+.|++|++||+.+++....+. +.+.+.++++++. ..+|++|+.|+.|++||+
T Consensus 104 l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~---~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 104 LSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS---GKLLASCSADMTIKLWDF 179 (410)
T ss_dssp EECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT---SSEEEEEETTSCCCEEET
T ss_pred ecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC---CCEEEEEeCCCeEEEEeC
Confidence 458999999999987 78899999999999999999998887776 3456888888874 458999999999999999
Q ss_pred CCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 178 ~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
+++.++..+.+|...|.+++|+|+++. |+||+.|++|++||++++.++..+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~-l~s~s~D~~i~~wd~~~~~~~~~~---------------------------- 230 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDH-IVSASRDKTIKMWEVQTGYCVKTF---------------------------- 230 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEE----------------------------
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCE-EEEEeCCCeEEEEECCCCcEEEEE----------------------------
Confidence 999999999999999999999999885 789999999999999876654332
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEe
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 337 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd 337 (446)
.+|...|.++.|+|+|.+|++|+.|++|++||
T Consensus 231 ------------------------------------------------~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd 262 (410)
T 1vyh_C 231 ------------------------------------------------TGHREWVRMVRPNQDGTLIASCSNDQTVRVWV 262 (410)
T ss_dssp ------------------------------------------------ECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ------------------------------------------------eCCCccEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 25667799999999999999999999999999
Q ss_pred cCcCceeeeeeeEEEeecCCCeEEEEcCC--------------------CcEEEEeC-CCceEEEEeecCceEEEecccc
Q 013274 338 VESGRNTLVNFETVRLQTSKPIQLATTQD--------------------PAVVFVPC-MTAVKAFDIWSGKTCLTFRGHY 396 (446)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~ 396 (446)
+.+++... .+..+......+++.|+ +..+++++ +..+++||+.+++.+.++.+|.
T Consensus 263 ~~~~~~~~----~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~ 338 (410)
T 1vyh_C 263 VATKECKA----ELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHD 338 (410)
T ss_dssp TTTCCEEE----EECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCS
T ss_pred CCCCceee----EecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCC
Confidence 98865321 12222333445566664 34566554 4679999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 397 EYVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 397 ~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
+.|++++|+|++++|+||+.|++|+||+......
T Consensus 339 ~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~ 372 (410)
T 1vyh_C 339 NWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRC 372 (410)
T ss_dssp SCEEEEEECSSSSCEEEEETTTEEEEECCTTSCC
T ss_pred CcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCce
Confidence 9999999999999999999999999999976543
No 36
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.9e-35 Score=275.04 Aligned_cols=284 Identities=18% Similarity=0.269 Sum_probs=229.1
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|.+.|++++|+| ++++|++++ ||+|++||+.++..... +.. ....+|...|.++.++| ++++|
T Consensus 48 ~~h~~~v~~~~~~~-~~~~l~~~~-dg~i~iw~~~~~~~~~~---------~~~---~~~~~~~~~v~~~~~~~-~~~~l 112 (337)
T 1gxr_A 48 LNHGEVVCAVTISN-PTRHVYTGG-KGCVKVWDISHPGNKSP---------VSQ---LDCLNRDNYIRSCKLLP-DGCTL 112 (337)
T ss_dssp ECCSSCCCEEEECS-SSSEEEEEC-BSEEEEEETTSTTCCSC---------SEE---EECSCTTSBEEEEEECT-TSSEE
T ss_pred ccCCCceEEEEEec-CCcEEEEcC-CCeEEEEECCCCCceee---------eec---ccccCCCCcEEEEEEcC-CCCEE
Confidence 48999999999996 678999998 99999999986542210 000 01236888999999987 78899
Q ss_pred EEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEE
Q 013274 120 VTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv 196 (446)
++++.|++|++||+.+++ ....+. ....+..+.+++. ..++++++.|+.|++||+++++....+.+|...|.++
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~---~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~ 189 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPD---SKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCI 189 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTT---SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCC---CCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEE
Confidence 999999999999999876 333333 3345778888874 4588999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
.|+|+++. |++++.||.|++||++++.....+
T Consensus 190 ~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~----------------------------------------------- 221 (337)
T 1gxr_A 190 DISNDGTK-LWTGGLDNTVRSWDLREGRQLQQH----------------------------------------------- 221 (337)
T ss_dssp EECTTSSE-EEEEETTSEEEEEETTTTEEEEEE-----------------------------------------------
T ss_pred EECCCCCE-EEEEecCCcEEEEECCCCceEeee-----------------------------------------------
Confidence 99999875 789999999999999876433221
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecC
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS 356 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 356 (446)
.|...+.+++|+|++.+|++++.|+.|++||+.+++.. ....+..
T Consensus 222 ------------------------------~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-----~~~~~~~ 266 (337)
T 1gxr_A 222 ------------------------------DFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-----QLHLHES 266 (337)
T ss_dssp ------------------------------ECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-----EECCCSS
T ss_pred ------------------------------cCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-----EEcCCcc
Confidence 23456899999999999999999999999999876431 1222344
Q ss_pred CCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCC
Q 013274 357 KPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 425 (446)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~ 425 (446)
....+++++++..+++++. ..+++|++.+++.... ..|...|++++|+||+++|++++.|+.|++|++
T Consensus 267 ~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 267 CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred ceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 5667889999888877654 6799999998887744 568999999999999999999999999999975
No 37
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.5e-35 Score=279.98 Aligned_cols=246 Identities=22% Similarity=0.346 Sum_probs=204.1
Q ss_pred cCccccEeEEEEeec---CCcEEEEEeCCCeEEEEECCCCeeeEEEecC---CceEEeeeccCCCCceEEEEeeCCCcEE
Q 013274 100 HGHKYAISSAIWYPV---DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP---GKVYRTAMSPLAASHMLIAAGTEDVQVR 173 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~---~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lasgs~d~~v~ 173 (446)
.+|...|+++.|.+. ++.+|+|||.|++|++||+..+.......+. ..+.++.+++. ..++++++.|+.|+
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~---~~~l~s~s~D~~i~ 105 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT---LPIAASSSLDAHIR 105 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS---SSEEEEEETTSEEE
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC---CCEEEEEeCCCcEE
Confidence 589999999999863 4679999999999999999877654444333 44677777764 45899999999999
Q ss_pred EEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccc
Q 013274 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSL 253 (446)
Q Consensus 174 vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (446)
+||+++++.+..+..|...+.+++|+|++++ |++++.||.|++||++++.....+
T Consensus 106 lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~g~~dg~v~i~~~~~~~~~~~~------------------------ 160 (321)
T 3ow8_A 106 LWDLENGKQIKSIDAGPVDAWTLAFSPDSQY-LATGTHVGKVNIFGVESGKKEYSL------------------------ 160 (321)
T ss_dssp EEETTTTEEEEEEECCTTCCCCEEECTTSSE-EEEECTTSEEEEEETTTCSEEEEE------------------------
T ss_pred EEECCCCCEEEEEeCCCccEEEEEECCCCCE-EEEEcCCCcEEEEEcCCCceeEEe------------------------
Confidence 9999999999999999999999999999985 789999999999999865432211
Q ss_pred ccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcE
Q 013274 254 SAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRI 333 (446)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i 333 (446)
..|...|.+++|+|+|++|++|+.|+.|
T Consensus 161 ----------------------------------------------------~~~~~~v~~~~~spdg~~lasg~~dg~i 188 (321)
T 3ow8_A 161 ----------------------------------------------------DTRGKFILSIAYSPDGKYLASGAIDGII 188 (321)
T ss_dssp ----------------------------------------------------ECSSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----------------------------------------------------cCCCceEEEEEECCCCCEEEEEcCCCeE
Confidence 1344568999999999999999999999
Q ss_pred EEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 334 RLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 334 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
++||+.+++.. ..+..+......++++|++.++++++. ..+++||+.+++...++.+|...|++++|+||+++|+
T Consensus 189 ~iwd~~~~~~~----~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~ 264 (321)
T 3ow8_A 189 NIFDIATGKLL----HTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFV 264 (321)
T ss_dssp EEEETTTTEEE----EEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEECCCCcEE----EEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEE
Confidence 99999987532 222233445667899999998888765 5799999999999999999999999999999999999
Q ss_pred EeeCCCcEEEeCCCCCC
Q 013274 413 TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 413 tgs~D~~v~vW~~~~~~ 429 (446)
||+.|++|+||++.+..
T Consensus 265 s~s~D~~v~iwd~~~~~ 281 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGTRT 281 (321)
T ss_dssp EEETTSCEEEEETTTTE
T ss_pred EEeCCCcEEEEeCCCCE
Confidence 99999999999998654
No 38
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.5e-36 Score=292.75 Aligned_cols=309 Identities=14% Similarity=0.165 Sum_probs=217.6
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
+++..|.+.|++++|+| ++++|++|+.|++|+|||+.++... ......+|...|.++.|+| ++
T Consensus 5 ~~~~~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~---------------~~~~~~~h~~~v~~~~~s~-~~ 67 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWK---------------HARTFSDHDKIVTCVDWAP-KS 67 (377)
T ss_dssp EEEEECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEE---------------ECCCBCCCSSCEEEEEECT-TT
T ss_pred eeEecCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceE---------------EEEEEecCCceEEEEEEeC-CC
Confidence 34556778999999997 6889999999999999999764200 0123458999999999987 68
Q ss_pred cEEEEEeCCCeEEEEECCCCe---eeEE-EecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc---eeeeeeC-
Q 013274 117 GLFVTGSYDHYVKVWDTNCTR---VVMN-FKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA---ISQTLSG- 188 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~---~~~~l~~- 188 (446)
++|++++.|++|++||+.++. .... ..+.+.+.++.+++. ..+|++++.|+.|++||++++. ....+.+
T Consensus 68 ~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 144 (377)
T 3dwl_C 68 NRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPN---EDKFAVGSGARVISVCYFEQENDWWVSKHLKRP 144 (377)
T ss_dssp CCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTT---SSCCEEEESSSCEEECCC-----CCCCEEECSS
T ss_pred CEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCC---CCEEEEEecCCeEEEEEECCcccceeeeEeecc
Confidence 899999999999999998876 3332 234566888888874 3578999999999999999887 4677887
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 189 h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
|...|.+++|+|++++ |++++.|++|++||++......... + .
T Consensus 145 h~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~----------~--------------------~------ 187 (377)
T 3dwl_C 145 LRSTILSLDWHPNNVL-LAAGCADRKAYVLSAYVRDVDAKPE----------A--------------------S------ 187 (377)
T ss_dssp CCSCEEEEEECTTSSE-EEEEESSSCEEEEEECCSSCC-CCC----------S--------------------C------
T ss_pred cCCCeEEEEEcCCCCE-EEEEeCCCEEEEEEEEecccCCCcc----------c--------------------c------
Confidence 9999999999999875 7899999999999987542100000 0 0
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeee
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF 348 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~ 348 (446)
..+... +.+ ...... +|.+.|.+++|+|+|++|++++.|++|++||+.+++.....+
T Consensus 188 --~~~~~~---~~~-----------------~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~ 244 (377)
T 3dwl_C 188 --VWGSRL---PFN-----------------TVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRAL 244 (377)
T ss_dssp --SSCSCC---CEE-----------------EEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEEC
T ss_pred --cccccc---chh-----------------hhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceee
Confidence 000000 000 000112 688899999999999999999999999999999876422112
Q ss_pred eEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCc------e------------------------E------EEe
Q 013274 349 ETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGK------T------------------------C------LTF 392 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~------~------------------------~------~~l 392 (446)
..+..+......+++++++.+++++..+.+.+|+..... . + ..|
T Consensus 245 ~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (377)
T 3dwl_C 245 ITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTF 324 (377)
T ss_dssp CCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------
T ss_pred EeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeCCCceEEEeeecccccccccccccccccccccccccccccccccc
Confidence 233333445667889999999988888888888765211 0 0 111
Q ss_pred ----------------cccccceEEEEEcCCC-C---EEEEeeCCCcEEEeCC
Q 013274 393 ----------------RGHYEYVNCCCFSSQD-Q---ELYTGGNDRQILVWCP 425 (446)
Q Consensus 393 ----------------~gH~~~v~~~~fSpd~-~---~lvtgs~D~~v~vW~~ 425 (446)
.+|.+.|+++++.++. . .|+|||.|+.|+||++
T Consensus 325 ~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 325 RNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 2399999999976654 3 6999999999999985
No 39
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=4.4e-35 Score=277.67 Aligned_cols=300 Identities=15% Similarity=0.224 Sum_probs=213.0
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV- 114 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~- 114 (446)
..++.+|++.|++|+|+| ++++|++|+.||+|+|||+.++... ... .....+|...|.++.|+|.
T Consensus 4 ~~~~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~--------~~~-----~~~~~~~~~~v~~~~~~~~~ 69 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSN--------WEL-----SDSWRAHDSSIVAIDWASPE 69 (351)
T ss_dssp CCEECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCC--------EEE-----EEEEECCSSCEEEEEECCGG
T ss_pred cccCcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCc--------cee-----cceeccCCCcEEEEEEcCCC
Confidence 456789999999999997 6789999999999999999764321 000 1123579999999999886
Q ss_pred CCcEEEEEeCCCeEEEEECCCC---------eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCT---------RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~---------~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
++.+|++++.|++|++||+.++ +.+..+. +.+.+..+.+.+... ..++++++.|+.|++||+++++.+.
T Consensus 70 d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~ 148 (351)
T 3f3f_A 70 YGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHL-GLKLACLGNDGILRLYDALEPSDLR 148 (351)
T ss_dssp GCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGG-CSEEEEEETTCEEEEEECSSTTCTT
T ss_pred CCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCC-CcEEEEecCCCcEEEecCCChHHhc
Confidence 5889999999999999999876 3344443 456688888887521 4589999999999999999887554
Q ss_pred eee-------------CCCCCeEEEEEecC---CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCccccccee
Q 013274 185 TLS-------------GHRDGIMTVEWSTS---SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVS 248 (446)
Q Consensus 185 ~l~-------------~h~~~v~sv~~s~~---~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (446)
.+. +|...+.++.|+|+ +. .+++++.|+.+.+|+...+.....
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~-------------------- 207 (351)
T 3f3f_A 149 SWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGKLHVA-------------------- 207 (351)
T ss_dssp CCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSCEEEE--------------------
T ss_pred cccccccccccccccCCcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCceeee--------------------
Confidence 433 68899999999997 55 578999999998887654321000
Q ss_pred eccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC----CEE
Q 013274 249 ISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG----MYL 324 (446)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg----~~l 324 (446)
....+|.+.|++++|+|++ .+|
T Consensus 208 ------------------------------------------------------~~~~~h~~~i~~~~~~p~~~~~~~~l 233 (351)
T 3f3f_A 208 ------------------------------------------------------AKLPGHKSLIRSISWAPSIGRWYQLI 233 (351)
T ss_dssp ------------------------------------------------------EECCCCCSCEEEEEECCCSSCSSEEE
T ss_pred ------------------------------------------------------eecCCCCcceeEEEECCCCCCcceEE
Confidence 0123577889999999998 899
Q ss_pred EEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-----CCceEEEEeecCceEEEecccccce
Q 013274 325 LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-----MTAVKAFDIWSGKTCLTFRGHYEYV 399 (446)
Q Consensus 325 ~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~d~~~~~~~~~l~gH~~~v 399 (446)
++|+.|++|++||+.++......... ..........+......... .....+|+..+.+.+..+.+|.+.|
T Consensus 234 ~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (351)
T 3f3f_A 234 ATGCKDGRIRIFKITEKLSPLASEES----LTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEV 309 (351)
T ss_dssp EEEETTSCEEEEEEEECC-------------------------------------------CCSEEEEEEEEECTTSSCE
T ss_pred EEEcCCCeEEEEeCCCCcCccccCCc----ccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccE
Confidence 99999999999999875432211100 00011111111111111111 1123445555667788999999999
Q ss_pred EEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 400 NCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 400 ~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
++++|+|++++|+||+.|+.|+||+++...
T Consensus 310 ~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 310 WSVSWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred EEEEEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 999999999999999999999999998654
No 40
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-35 Score=284.42 Aligned_cols=280 Identities=13% Similarity=0.201 Sum_probs=228.4
Q ss_pred CccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
|.+.|++++|+| ++++|++|+.||.|++||.+ +.. + ....+|...|.++.++| ++.+|++
T Consensus 107 ~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~~~~-~~~------------~-----~~~~~~~~~v~~~~~~~-~~~~l~~ 166 (425)
T 1r5m_A 107 TTNQVTCLAWSH-DGNSIVTGVENGELRLWNKT-GAL------------L-----NVLNFHRAPIVSVKWNK-DGTHIIS 166 (425)
T ss_dssp -CBCEEEEEECT-TSSEEEEEETTSCEEEEETT-SCE------------E-----EEECCCCSCEEEEEECT-TSSEEEE
T ss_pred CCCceEEEEEcC-CCCEEEEEeCCCeEEEEeCC-CCe------------e-----eeccCCCccEEEEEECC-CCCEEEE
Confidence 788999999997 68899999999999999932 211 1 12247889999999987 7889999
Q ss_pred EeCCCeEEEEECCCCeeeEEEecCCc----------------eEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee
Q 013274 122 GSYDHYVKVWDTNCTRVVMNFKMPGK----------------VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT 185 (446)
Q Consensus 122 ~s~D~~i~iWd~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~ 185 (446)
++.|+.|++||+.+++.+..+..... +..+.+.+. ..+++++.|+.|++||++++.....
T Consensus 167 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 167 MDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDD----DKFVIPGPKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp EETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEET----TEEEEECGGGCEEEEETTCSSCSEE
T ss_pred EecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCC----CEEEEEcCCCeEEEEEcCCCceeee
Confidence 99999999999999988877764432 444555542 3578889999999999999999999
Q ss_pred eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCC
Q 013274 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRA 265 (446)
Q Consensus 186 l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (446)
+.+|...|.+++|+|+++. |++++.|+.|++||++++.+...
T Consensus 243 ~~~~~~~i~~~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~------------------------------------- 284 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNKL-LLSASDDGTLRIWHGGNGNSQNC------------------------------------- 284 (425)
T ss_dssp ECCCSSCEEEEEEETTTTE-EEEEETTSCEEEECSSSBSCSEE-------------------------------------
T ss_pred eccCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCCccceE-------------------------------------
Confidence 9999999999999999885 78999999999999876432211
Q ss_pred ccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceee
Q 013274 266 PQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL 345 (446)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~ 345 (446)
..+|...|.+++|+|++ +|++++.|+.|++||+.+++..
T Consensus 285 ---------------------------------------~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~- 323 (425)
T 1r5m_A 285 ---------------------------------------FYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLL- 323 (425)
T ss_dssp ---------------------------------------ECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEE-
T ss_pred ---------------------------------------ecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEe-
Confidence 12466779999999999 9999999999999999886532
Q ss_pred eeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCc--------------------eEEEeccccc--ceEEE
Q 013274 346 VNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGK--------------------TCLTFRGHYE--YVNCC 402 (446)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~--------------------~~~~l~gH~~--~v~~~ 402 (446)
.....+......+++++++..+++++. ..+++|++.+++ .+..+.+|.. .|+++
T Consensus 324 ---~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 400 (425)
T 1r5m_A 324 ---ALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDL 400 (425)
T ss_dssp ---EEEECTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEE
T ss_pred ---EecccCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEE
Confidence 122223345567889999988887764 589999998888 8899999977 99999
Q ss_pred EEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 403 CFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 403 ~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
+|+||+++|++|+.|+.|++|++++
T Consensus 401 ~~s~~~~~l~~~~~dg~i~iw~~~g 425 (425)
T 1r5m_A 401 SWNCAGNKISVAYSLQEGSVVAIPG 425 (425)
T ss_dssp EECTTSSEEEEEESSSCCEEEECCC
T ss_pred EccCCCceEEEEecCceEEEEeecC
Confidence 9999999999999999999999863
No 41
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.7e-34 Score=268.12 Aligned_cols=281 Identities=17% Similarity=0.238 Sum_probs=216.5
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeC
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~ 124 (446)
..++|+||+ + ++|++| .|++|+|||+++++... . ....+|...|.++.++| ++++|+||+.
T Consensus 27 y~~~l~WS~-~-~~lAvg-~D~tV~iWd~~tg~~~~------------~---~~~~~~~~~V~~v~~~~-~~~~l~sgs~ 87 (318)
T 4ggc_A 27 YLNLVDWSS-G-NVLAVA-LDNSVYLWSASSGDILQ------------L---LQMEQPGEYISSVAWIK-EGNYLAVGTS 87 (318)
T ss_dssp TCBCEEECT-T-SEEEEE-ETTEEEEEETTTCCEEE------------E---EECCSTTCCEEEEEECT-TSSEEEEEET
T ss_pred cceEEEECC-C-CEEEEE-eCCEEEEEECCCCCEEE------------E---EEecCCCCeEEEEEECC-CCCEEEEEEC
Confidence 368899986 3 466655 69999999998765310 1 12357888999999987 7889999999
Q ss_pred CCeEEEEECCCCeeeEEEecCC-ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCCCCCeEEEEEecCC
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPG-KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h~~~v~sv~~s~~~ 202 (446)
|++|++||+++++++..+..+. .+..... ...++++++.++.+++|+...+ ..+..+.+|...+..+.+++++
T Consensus 88 Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~-----~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (318)
T 4ggc_A 88 SAEVQLWDVQQQKRLRNMTSHSARVGSLSW-----NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 162 (318)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred CCcEEEeecCCceeEEEecCccceEEEeec-----CCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCC
Confidence 9999999999999988776433 2333222 2347999999999999999876 4567889999999999999998
Q ss_pred CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccc
Q 013274 203 EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282 (446)
Q Consensus 203 ~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
+. |++++.|++|++||+++++.....
T Consensus 163 ~~-l~s~~~d~~i~iwd~~~~~~~~~~----------------------------------------------------- 188 (318)
T 4ggc_A 163 RH-LASGGNDNLVNVWPSAPGEGGWVP----------------------------------------------------- 188 (318)
T ss_dssp SE-EEEEETTSCEEEEESSCBTTBSCC-----------------------------------------------------
T ss_pred CE-EEEEecCcceeEEECCCCcccccc-----------------------------------------------------
Confidence 85 789999999999999764310000
Q ss_pred eeecCCccccccCCCcccccccccccccCeEEEEEccCCCE---EEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCe
Q 013274 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY---LLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359 (446)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~---l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 359 (446)
......|.+.|.++.++|++.. +++++.|++|++||......... ........
T Consensus 189 -------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~-----~~~~~~v~ 244 (318)
T 4ggc_A 189 -------------------LQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-----VDAHSQVC 244 (318)
T ss_dssp -------------------SEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE-----EECSSCEE
T ss_pred -------------------eeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc-----ccceeeee
Confidence 0011245667999999998753 35778899999999987643211 11233445
Q ss_pred EEEEcCCCcEEEEeC---CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 360 QLATTQDPAVVFVPC---MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
.+.+.++...+++++ ...+++||+.+++.+.+|.+|.+.|++|+||||+++|+|||.|++|+||++..
T Consensus 245 ~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 245 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 667778777766543 35799999999999999999999999999999999999999999999999853
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.1e-34 Score=280.42 Aligned_cols=281 Identities=18% Similarity=0.260 Sum_probs=219.1
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeC
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~ 124 (446)
..+.|+||+ +++|+.| .|++|+|||+.++.... . ....+|...|+++.|+| ++.+||+|+.
T Consensus 107 y~~~l~wS~--~n~lAvg-ld~tV~lWd~~tg~~~~------------~---~~~~~~~~~V~sv~fsp-dg~~lasgs~ 167 (420)
T 4gga_A 107 YLNLVDWSS--GNVLAVA-LDNSVYLWSASSGDILQ------------L---LQMEQPGEYISSVAWIK-EGNYLAVGTS 167 (420)
T ss_dssp TCBCEEECT--TSEEEEE-ETTEEEEEETTTCCEEE------------E---EECCSTTCCEEEEEECT-TSSEEEEEET
T ss_pred cceeEEECC--CCEEEEE-eCCEEEEEECCCCCEEE------------E---EEecCCCCcEEEEEECC-CCCEEEEEEC
Confidence 467899985 3567665 59999999998764310 1 12357888999999987 8899999999
Q ss_pred CCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCCCCCeEEEEEecCC
Q 013274 125 DHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h~~~v~sv~~s~~~ 202 (446)
|++|++||+.+++++..+..+ ..+.++++ +..++++|+.|+.+++||.... ..+..+.+|...+..+.++|++
T Consensus 168 Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~-----~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g 242 (420)
T 4gga_A 168 SAEVQLWDVQQQKRLRNMTSHSARVGSLSW-----NSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDG 242 (420)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEE-----ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTS
T ss_pred CCeEEEEEcCCCcEEEEEeCCCCceEEEee-----CCCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCC
Confidence 999999999999988877643 33444443 2358999999999999999875 4567889999999999999999
Q ss_pred CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccc
Q 013274 203 EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282 (446)
Q Consensus 203 ~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
+. +++++.|+.|++||++.+.....
T Consensus 243 ~~-l~s~~~D~~v~i~~~~~~~~~~~------------------------------------------------------ 267 (420)
T 4gga_A 243 RH-LASGGNDNLVNVWPSAPGEGGWV------------------------------------------------------ 267 (420)
T ss_dssp SE-EEEEETTSCEEEEESSCCSSCSC------------------------------------------------------
T ss_pred Ce-eeeeeccccceEEeeccccccce------------------------------------------------------
Confidence 85 78999999999999875421000
Q ss_pred eeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEE--eecCCcEEEEecCcCceeeeeeeEEEeecCCCe
Q 013274 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLS--AGSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359 (446)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~s--gs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 359 (446)
.......|.+.|.+++|+|++. .+++ |+.|++|++||+.+++... .. .......
T Consensus 268 ------------------~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~----~~-~~~~~v~ 324 (420)
T 4gga_A 268 ------------------PLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLS----AV-DAHSQVC 324 (420)
T ss_dssp ------------------CSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEE----EE-ECSSCEE
T ss_pred ------------------eeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccce----ee-cccccee
Confidence 0001235677899999999765 4444 5689999999999875421 11 1233456
Q ss_pred EEEEcCCCcEEEEeC---CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 360 QLATTQDPAVVFVPC---MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
.+.+.++...+++++ ...+++||+.+++.+.+|.||.+.|++|+|||||++|||||.|++|+||++..
T Consensus 325 ~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 325 SILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp EEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSC
T ss_pred eeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCC
Confidence 677888887776653 35799999999999999999999999999999999999999999999999854
No 43
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1e-34 Score=321.52 Aligned_cols=372 Identities=18% Similarity=0.270 Sum_probs=258.4
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
.++.+|.+.|++++|+| ++++|++|+.||+|++||+.++... ....+|...|.++.|+| ++
T Consensus 609 ~~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~~~-----------------~~~~~h~~~v~~~~~s~-~~ 669 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGEKL-----------------LDIKAHEDEVLCCAFSS-DD 669 (1249)
T ss_dssp EEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECT-TS
T ss_pred EEEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCEE-----------------EEeccCCCCEEEEEEec-CC
Confidence 35679999999999997 6889999999999999999875421 12358999999999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT 195 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s 195 (446)
++|++++.|++|++||+.+++++..+. +.+.+.++.+++.. +..++++|+.|+.|++||++++.+...+.+|.+.|.+
T Consensus 670 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~ 748 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKS-NHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNH 748 (1249)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCC-CceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEE
Confidence 899999999999999999999888776 34567888888753 3468999999999999999999999999999999999
Q ss_pred EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcc-----cccceeecc----ccccCCC--CCcCCC
Q 013274 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPL-----LKRKVSISK----SLSAGQN--SSVKPR 264 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~----~~~~~~~--~~~~~~ 264 (446)
++|+|+++. +++++.||+|++||++++.+...+...........+. ......... ....... ......
T Consensus 749 ~~~sp~~~~-l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~ 827 (1249)
T 3sfz_A 749 CRFSPDDEL-LASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIH 827 (1249)
T ss_dssp EEECSSTTE-EEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETT
T ss_pred EEEecCCCE-EEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEec
Confidence 999999985 7899999999999999988776664322111000000 000000000 0000000 000000
Q ss_pred C--cc-----ccccCCCceeecccceeecCCccccccC---CCcccccccccccccCeEEEEEccCCCEEEEeecCCcEE
Q 013274 265 A--PQ-----KRSANGNGVRQSSVGRIPAKGSVRQRLH---PGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 334 (446)
Q Consensus 265 ~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~ 334 (446)
. .. ........+..++.+...+.+.....+. ...........+|.+.|.+++|+|+|.+|++++.|++|+
T Consensus 828 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~ 907 (1249)
T 3sfz_A 828 TSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIR 907 (1249)
T ss_dssp TCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEE
Confidence 0 00 0001111222333332222221111110 000111123468999999999999999999999999999
Q ss_pred EEecCcCceee----e-ee--------------------e--------EEEeecCCCeEEEEcCCCcEEEEeCC-CceEE
Q 013274 335 LWDVESGRNTL----V-NF--------------------E--------TVRLQTSKPIQLATTQDPAVVFVPCM-TAVKA 380 (446)
Q Consensus 335 lWd~~~~~~~~----~-~~--------------------~--------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 380 (446)
+||+.+..... . .. . ...........++++|++..+++++. +.+++
T Consensus 908 vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i 987 (1249)
T 3sfz_A 908 VWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKI 987 (1249)
T ss_dssp EEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEE
T ss_pred EEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEE
Confidence 99976421100 0 00 0 00001123445778899888887754 68999
Q ss_pred EEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 381 FDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 381 ~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
|++.+++....+.+|.+.|++++|+||+++|+|++.|++|++|++.+..
T Consensus 988 ~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~ 1036 (1249)
T 3sfz_A 988 IELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGD 1036 (1249)
T ss_dssp EETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTE
T ss_pred EEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCc
Confidence 9999999999999999999999999999999999999999999987653
No 44
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-36 Score=291.35 Aligned_cols=294 Identities=14% Similarity=0.189 Sum_probs=230.1
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
..|.+.|++++|+| ++++|++|+.||+|++||+.+.... ...+ ....+|...|.++.++|.++.+|
T Consensus 64 ~~~~~~v~~~~~s~-~~~~l~~~~~dg~v~vw~~~~~~~~--------~~~~-----~~~~~h~~~v~~~~~~~~~~~~l 129 (416)
T 2pm9_A 64 LQVDSKFNDLDWSH-NNKIIAGALDNGSLELYSTNEANNA--------INSM-----ARFSNHSSSVKTVKFNAKQDNVL 129 (416)
T ss_dssp CCCSSCEEEEEECS-SSSCEEEEESSSCEEEECCSSTTSC--------CCEE-----EECCCSSSCCCEEEECSSSTTBE
T ss_pred EecCCceEEEEECC-CCCeEEEEccCCeEEEeeccccccc--------ccch-----hhccCCccceEEEEEcCCCCCEE
Confidence 36899999999997 6789999999999999998763210 0011 12357999999999998558899
Q ss_pred EEEeCCCeEEEEECCCCe------eeEEE----ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC
Q 013274 120 VTGSYDHYVKVWDTNCTR------VVMNF----KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH 189 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~~~------~~~~~----~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h 189 (446)
++++.|++|++||+.+++ ..... .+.+.+.++++++.. ..++++++.|+.|++||+++++.+..+..|
T Consensus 130 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~ 207 (416)
T 2pm9_A 130 ASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL--AHVFASAGSSNFASIWDLKAKKEVIHLSYT 207 (416)
T ss_dssp EEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC--TTEEEEESSSSCEEEEETTTTEEEEEECCC
T ss_pred EEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC--CcEEEEEcCCCCEEEEECCCCCcceEEecc
Confidence 999999999999998876 32222 234567788888752 358999999999999999999988888776
Q ss_pred ------CCCeEEEEEecCCCeEEEEeeCCC---cEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCC
Q 013274 190 ------RDGIMTVEWSTSSEWILVTGGCDG---AIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260 (446)
Q Consensus 190 ------~~~v~sv~~s~~~~~~l~S~s~Dg---~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (446)
...|.+++|+|++..++++++.|+ .|++||++++...
T Consensus 208 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~---------------------------------- 253 (416)
T 2pm9_A 208 SPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTP---------------------------------- 253 (416)
T ss_dssp CCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSC----------------------------------
T ss_pred ccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCC----------------------------------
Confidence 789999999999866789999998 9999999763100
Q ss_pred cCCCCccccccCCCceeecccceeecCCccccccCCCccccccccc-ccccCeEEEEEcc-CCCEEEEeecCCcEEEEec
Q 013274 261 VKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRAT-AHYGAVTGLKVTE-DGMYLLSAGSDSRIRLWDV 338 (446)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~fs~-dg~~l~sgs~D~~i~lWd~ 338 (446)
..... +|...|.+++|+| ++.+|++++.|++|++||+
T Consensus 254 -----------------------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~ 292 (416)
T 2pm9_A 254 -----------------------------------------LQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNP 292 (416)
T ss_dssp -----------------------------------------SBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECS
T ss_pred -----------------------------------------cEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeC
Confidence 00112 5778899999999 9999999999999999999
Q ss_pred CcCceeeeeeeEEEeecCCCeEEEEcCCC-cEEEEeCC-CceEEEEeecCceEEEe------------------------
Q 013274 339 ESGRNTLVNFETVRLQTSKPIQLATTQDP-AVVFVPCM-TAVKAFDIWSGKTCLTF------------------------ 392 (446)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~d~~~~~~~~~l------------------------ 392 (446)
.+++.. ..+..+......++++|++ .++++++. ..+++|++.+.+.....
T Consensus 293 ~~~~~~----~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (416)
T 2pm9_A 293 ESAEQL----SQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESK 368 (416)
T ss_dssp SSCCEE----EEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CC
T ss_pred CCCccc----eeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccc
Confidence 987532 2223334556678999987 67777654 57999999776532221
Q ss_pred -----------cccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 393 -----------RGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 393 -----------~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
..|...+++++|||||++|++++.|++|+||++.+.
T Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 369 EKPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp SCCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred cccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 127788899999999999999999999999998753
No 45
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-34 Score=266.46 Aligned_cols=283 Identities=14% Similarity=0.197 Sum_probs=224.7
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
..+.+|.+.|++|+| + ++.+|++|+.||+|++||+.++... ....+|...|.++.++| ++
T Consensus 12 ~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~-----------------~~~~~~~~~v~~~~~~~-~~ 71 (313)
T 3odt_A 12 ATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLG-----------------TVVYTGQGFLNSVCYDS-EK 71 (313)
T ss_dssp EEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEE-----------------EEEEECSSCEEEEEEET-TT
T ss_pred HHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEE-----------------EEeecCCccEEEEEECC-CC
Confidence 457899999999999 5 5678999999999999998654311 11246888999999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCC---eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCC
Q 013274 117 GLFVTGSYDHYVKVWDTNCT---RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG 192 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~ 192 (446)
.+|++++.|+.|++|++... +.+..+. +.+.+.++.+. ..++++++.|+.|++|| .+.....+..|...
T Consensus 72 ~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~-----~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~ 144 (313)
T 3odt_A 72 ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ-----DGVVISGSWDKTAKVWK--EGSLVYNLQAHNAS 144 (313)
T ss_dssp TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE-----TTEEEEEETTSEEEEEE--TTEEEEEEECCSSC
T ss_pred CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec-----CCEEEEEeCCCCEEEEc--CCcEEEecccCCCc
Confidence 89999999999999998754 3333333 34556666662 34789999999999999 67788889999999
Q ss_pred eEEEEEec-CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccccc
Q 013274 193 IMTVEWST-SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271 (446)
Q Consensus 193 v~sv~~s~-~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (446)
+.++.|.| +++ .+++++.||.|++||... ....+
T Consensus 145 v~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~--~~~~~------------------------------------------ 179 (313)
T 3odt_A 145 VWDAKVVSFSEN-KFLTASADKTIKLWQNDK--VIKTF------------------------------------------ 179 (313)
T ss_dssp EEEEEEEETTTT-EEEEEETTSCEEEEETTE--EEEEE------------------------------------------
T ss_pred eeEEEEccCCCC-EEEEEECCCCEEEEecCc--eEEEE------------------------------------------
Confidence 99999998 555 578999999999999432 11111
Q ss_pred CCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEE
Q 013274 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV 351 (446)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~ 351 (446)
...|...|.+++|+|++. +++++.|+.|++||+.+++.. ...
T Consensus 180 ---------------------------------~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~----~~~ 221 (313)
T 3odt_A 180 ---------------------------------SGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVL----RTY 221 (313)
T ss_dssp ---------------------------------CSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEE----EEE
T ss_pred ---------------------------------eccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhh----hhh
Confidence 012566799999999998 889999999999999887532 122
Q ss_pred EeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 352 RLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
..+......+++++++.++.......+++||+.+++....+..|...|++++|+||++ +++++.|+.|++|+++....
T Consensus 222 ~~~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGDIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp ECCSSCEEEEEECTTSCEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGC
T ss_pred hcCCceEEEEEEecCCCEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCce
Confidence 2334556678899988655555667899999999999999999999999999999998 66799999999999986643
No 46
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.7e-34 Score=308.04 Aligned_cols=168 Identities=13% Similarity=0.109 Sum_probs=142.1
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
..+|.+.|++|+|+| ++++||+|+.||+|+|||..+... .. ...|...|.++.|+| +++
T Consensus 13 ~~gh~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~~------------~~------~~~~~~~V~~l~fsp--g~~ 71 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVEV------------VI------KLEDRSAIKEMRFVK--GIY 71 (902)
T ss_dssp EEECSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCEE------------EE------ECSSCCCEEEEEEET--TTE
T ss_pred ccCCCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcEE------------EE------EcCCCCCEEEEEEcC--CCE
Confidence 458999999999997 678999999999999999764321 00 124778899999988 569
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee-----------eeee
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS-----------QTLS 187 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~-----------~~l~ 187 (446)
|+|++.|++|++||+.+++++..+...+.+.++++++. ..++++|+.|+.|++||++++.+. ..+.
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~~~~~V~~v~~sp~---g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~ 148 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVFVPGKITSIDTDAS---LDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA 148 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEECSSCEEEEECCTT---CSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS
T ss_pred EEEEECcCeEEEEECCCCcEEEEEcCCCCEEEEEECCC---CCEEEEEcCCCcEEEEECCCCccccceeccccccccccc
Confidence 99999999999999999999888887788888888875 458999999999999999988753 3457
Q ss_pred CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeec
Q 013274 188 GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231 (446)
Q Consensus 188 ~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~ 231 (446)
+|.+.|.+++|+|++...+++|+.||+| +||++++.+.+.+..
T Consensus 149 ~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~ 191 (902)
T 2oaj_A 149 ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIY 191 (902)
T ss_dssp SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECC
T ss_pred cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEec
Confidence 8999999999999765568899999999 999999988877754
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.9e-35 Score=284.09 Aligned_cols=299 Identities=12% Similarity=0.182 Sum_probs=233.1
Q ss_pred CccceeEEEeecCCCCEEEEe----------eCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSG----------ASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIW 111 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~----------s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~ 111 (446)
+...|++++|+|++..+|++| +.|++|+|||+.++..... .....|...|.++.|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~---------------~~~~~~~~~v~~~~~ 75 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP---------------IASLQVDSKFNDLDW 75 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC---------------SCCCCCSSCEEEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE---------------EEEEecCCceEEEEE
Confidence 446789999998544599999 8999999999986542100 011357888999999
Q ss_pred eecCCcEEEEEeCCCeEEEEECCC----CeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc-----
Q 013274 112 YPVDTGLFVTGSYDHYVKVWDTNC----TRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA----- 181 (446)
Q Consensus 112 ~~~~~~~l~s~s~D~~i~iWd~~~----~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~----- 181 (446)
+| ++.+|++++.|++|++||+.. ...+..+. +.+.+.++.+++.. ..+|++++.|+.|++||++++.
T Consensus 76 s~-~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~ 152 (416)
T 2pm9_A 76 SH-NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ--DNVLASGGNNGEIFIWDMNKCTESPSN 152 (416)
T ss_dssp CS-SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS--TTBEEEECSSSCEEBCBTTTTSSCTTT
T ss_pred CC-CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC--CCEEEEEcCCCeEEEEECCCCcccccc
Confidence 87 788999999999999999987 33444443 45567888888752 3579999999999999999886
Q ss_pred -eee---eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 182 -ISQ---TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 182 -~~~---~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
... .+.+|...|.+++|+|++..+|++++.||.|++||++++.+...+....
T Consensus 153 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------------ 208 (416)
T 2pm9_A 153 YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTS------------------------ 208 (416)
T ss_dssp CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCC------------------------
T ss_pred ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccc------------------------
Confidence 333 3468999999999999954568999999999999998876544331100
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC-CEEEEeecCC---cE
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG-MYLLSAGSDS---RI 333 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg-~~l~sgs~D~---~i 333 (446)
...+|...|.+++|+|++ .+|++++.|+ .|
T Consensus 209 ----------------------------------------------~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 209 ----------------------------------------------PNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp ----------------------------------------------CSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred ----------------------------------------------cccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 012456779999999997 6899999999 99
Q ss_pred EEEecCcCceeeeeeeEEEeecCCCeEEEEcC-CCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCC-CE
Q 013274 334 RLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD-QE 410 (446)
Q Consensus 334 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~-~~ 410 (446)
++||+.++......+. ..+......++++| ++.++++++ ...+++||+.+++.+..+.+|...|++++|+|++ ++
T Consensus 243 ~~~d~~~~~~~~~~~~--~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLN--QGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDL 320 (416)
T ss_dssp CEEETTSTTSCSBCCC--SCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTE
T ss_pred EEEeCCCCCCCcEEee--cCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCE
Confidence 9999998642222111 02234556788888 777777765 4689999999999999999999999999999999 89
Q ss_pred EEEeeCCCcEEEeCCCCCCC
Q 013274 411 LYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 411 lvtgs~D~~v~vW~~~~~~~ 430 (446)
|++++.|+.|+||++.....
T Consensus 321 l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 321 FACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp EEECCSSSEEEEEESCCCCC
T ss_pred EEEEecCCcEEEEEccCCCC
Confidence 99999999999999986653
No 48
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1e-33 Score=276.81 Aligned_cols=344 Identities=13% Similarity=0.192 Sum_probs=237.1
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
..+++++|+| ++++|++|+.|++|++||+.+.... ....+| .+.++.++++++.+|++|+
T Consensus 57 ~~~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~~~-----------------~~~~~~--~~~~~~~~~~~~~~l~~~~ 116 (420)
T 3vl1_A 57 DAGKGNTFEK-VGSHLYKARLDGHDFLFNTIIRDGS-----------------KMLKRA--DYTAVDTAKLQMRRFILGT 116 (420)
T ss_dssp BCCTTCEEEE-EETTEEEEEETTEEEEEECCSEETT-----------------TTSCSC--CEEEEEEECSSSCEEEEEE
T ss_pred ccccceeeee-cCCeEEEEEcCCcEEEEEeccccee-----------------eEEecC--CceEEEEEecCCCEEEEEE
Confidence 3456899997 5778999999999999998765431 111233 4455556666899999999
Q ss_pred CCCeEEEEECCCCeeeEEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCC
Q 013274 124 YDHYVKVWDTNCTRVVMNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~ 202 (446)
.|++|++||+.+++....+ .+.+.+.++++++. ..+|++|+.|+.|++||+++++.+..+.+|.+.|.+++|+|++
T Consensus 117 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 117 TEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS---GEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp TTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT---SSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTT
T ss_pred CCCCEEEEeCCCcceeeecccccCccEEEEECCC---CCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCC
Confidence 9999999999988887765 45667889999885 3489999999999999999999999999999999999999998
Q ss_pred CeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccc
Q 013274 203 EWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282 (446)
Q Consensus 203 ~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
+. |++++.|++|++||++++++...+......... +. .... ....... ...........+..++.+
T Consensus 194 ~~-l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~---v~--~~~~--~~~~~~~------~~~~~~~~v~~~~~s~~~ 259 (420)
T 3vl1_A 194 RN-VLSASLDGTIRLWECGTGTTIHTFNRKENPHDG---VN--SIAL--FVGTDRQ------LHEISTSKKNNLEFGTYG 259 (420)
T ss_dssp TE-EEEEETTSCEEEEETTTTEEEEEECBTTBTTCC---EE--EEEE--EECCCSS------CGGGCCCCCCTTCSSCTT
T ss_pred CE-EEEEcCCCcEEEeECCCCceeEEeecCCCCCCC---cc--EEEE--ecCCcce------eeecccCcccceEEcCCC
Confidence 85 789999999999999999887776543211100 00 0000 0000000 000000011112222222
Q ss_pred eeecCCccccccCCCccc----ccccccccccCeEEEEEccCCC-EEEEeecCCcEEEEecCcCceeeeeeeEEEeecCC
Q 013274 283 RIPAKGSVRQRLHPGMLS----SQDRATAHYGAVTGLKVTEDGM-YLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK 357 (446)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~ 357 (446)
...+.+..+..+...... .......|...|.+++|+|++. +|++|+.|+.|++||+.+++.... .+......
T Consensus 260 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~---~~~~~~~~ 336 (420)
T 3vl1_A 260 KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVG---EFLINEGT 336 (420)
T ss_dssp EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE---EEEESTTS
T ss_pred CEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchh---hhhccCCC
Confidence 222221111111000000 0111235788999999999999 999999999999999998653222 22222344
Q ss_pred CeEEEEcCCCcEEEEeCC-CceEEEEeecC---------ceEEEecccccceEEEEEcCCCC---EEEEeeCCCcEEEeC
Q 013274 358 PIQLATTQDPAVVFVPCM-TAVKAFDIWSG---------KTCLTFRGHYEYVNCCCFSSQDQ---ELYTGGNDRQILVWC 424 (446)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~---------~~~~~l~gH~~~v~~~~fSpd~~---~lvtgs~D~~v~vW~ 424 (446)
++...+.+++..+++++. ..+++|++.+. .....+.+|.+.|.+++|+||++ .|++++.++.+++|+
T Consensus 337 ~v~~~~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~ 416 (420)
T 3vl1_A 337 PINNVYFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYN 416 (420)
T ss_dssp CEEEEEEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEE
T ss_pred CceEEEeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEe
Confidence 555556667777777654 57999999763 22346788999999999999999 788888899999999
Q ss_pred CCC
Q 013274 425 PSR 427 (446)
Q Consensus 425 ~~~ 427 (446)
++.
T Consensus 417 ~~~ 419 (420)
T 3vl1_A 417 LSN 419 (420)
T ss_dssp SCC
T ss_pred ccC
Confidence 865
No 49
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=9.1e-34 Score=270.20 Aligned_cols=248 Identities=17% Similarity=0.208 Sum_probs=194.1
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~ 120 (446)
.|...|++|+|++ + ..|++|+.||+|+|||++++.... .......+|...|.++.|+| ++++|+
T Consensus 80 ~~~~~v~~~~~s~-d-~~l~~~s~dg~v~lWd~~~~~~~~-------------~~~~~~~~H~~~V~~v~~sp-dg~~l~ 143 (344)
T 4gqb_B 80 QTEAGVADLTWVG-E-RGILVASDSGAVELWELDENETLI-------------VSKFCKYEHDDIVSTVSVLS-SGTQAV 143 (344)
T ss_dssp EESSCEEEEEEET-T-TEEEEEETTSEEEEEEECTTSSCE-------------EEEEEEECCSSCEEEEEECT-TSSEEE
T ss_pred ccCCCEEEEEEeC-C-CeEEEEECCCEEEEEeccCCCcee-------------EeeccccCCCCCEEEEEECC-CCCEEE
Confidence 3567899999996 3 468899999999999998765321 01122358999999999987 889999
Q ss_pred EEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee--CCCCCeEEEE
Q 013274 121 TGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS--GHRDGIMTVE 197 (446)
Q Consensus 121 s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~--~h~~~v~sv~ 197 (446)
||+.|++|++||+.+++++..+. +.+.+.++++++... .+|++++.|+.|++||+++++....+. .|...+.+++
T Consensus 144 sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~--~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 221 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD--SVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLA 221 (344)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT--TEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEE
T ss_pred EEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC--Cceeeeccccccccccccccceeeeeecceeeccceeee
Confidence 99999999999999999988876 456788888887543 478999999999999999998877764 5667899999
Q ss_pred EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCcee
Q 013274 198 WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVR 277 (446)
Q Consensus 198 ~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (446)
|+|++..+|++|+.||+|++||+++++++..
T Consensus 222 ~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~------------------------------------------------- 252 (344)
T 4gqb_B 222 WHPQQSEVFVFGDENGTVSLVDTKSTSCVLS------------------------------------------------- 252 (344)
T ss_dssp ECSSCTTEEEEEETTSEEEEEESCC--CCEE-------------------------------------------------
T ss_pred ecCCCCcceEEeccCCcEEEEECCCCcEEEE-------------------------------------------------
Confidence 9997776789999999999999987654322
Q ss_pred ecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC-CEEEEeecCCcEEEEecCcCceeeeeeeEEEeecC
Q 013274 278 QSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG-MYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS 356 (446)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg-~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 356 (446)
..+|...|++|+|+|+| .+|+||+.|++|+|||+.+++. . ....+..
T Consensus 253 ---------------------------~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~--~---~~~~H~~ 300 (344)
T 4gqb_B 253 ---------------------------SAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL--F---RSQAHRD 300 (344)
T ss_dssp ---------------------------EECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE--E---EECCCSS
T ss_pred ---------------------------EcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE--E---EEcCCCC
Confidence 23677889999999998 5899999999999999987642 1 1223345
Q ss_pred CCeEEEEcCCCc-EEEEe-CCCceEEEEeecCc
Q 013274 357 KPIQLATTQDPA-VVFVP-CMTAVKAFDIWSGK 387 (446)
Q Consensus 357 ~~~~~~~~~~~~-~~~~~-~~~~~~~~d~~~~~ 387 (446)
....++++|++. +++++ .+..+++|++.+..
T Consensus 301 ~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 301 FVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred CEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 567788998875 45554 45789999997654
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-33 Score=274.01 Aligned_cols=293 Identities=16% Similarity=0.174 Sum_probs=224.1
Q ss_pred CCccceeEEEeecCCCC-EEEEeeCCCcEEEEEc----ccCcCCCCCCccccccceEEecc-----ccccCccccEeEEE
Q 013274 41 PHKGSINSLQVDLTEER-YLLSGASDSSVAVYDV----QRATDYEGGGHIAKHRSVFVVDK-----QHEHGHKYAISSAI 110 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~-~l~s~s~Dg~i~lWd~----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~gh~~~V~~~~ 110 (446)
.|.+.|++++|+| +++ +|++|+.||+|++||+ .++...- .......... ....+|...|.++.
T Consensus 43 ~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 43 VKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYW------KLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp EECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CE------EEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccc------cccccccccccccccccccCCCCceEEEE
Confidence 4669999999997 466 9999999999999999 6554100 0000001100 01124788999999
Q ss_pred EeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC
Q 013274 111 WYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH 189 (446)
Q Consensus 111 ~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h 189 (446)
|+| ++++|++++.|++|++|| .++..+..+. +.+.+.++.+++. ..+|++++.|+.|++||++++..+..+..|
T Consensus 116 ~s~-~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 190 (425)
T 1r5m_A 116 WSH-DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKD---GTHIISMDVENVTILWNVISGTVMQHFELK 190 (425)
T ss_dssp ECT-TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTT---SSEEEEEETTCCEEEEETTTTEEEEEECCC
T ss_pred EcC-CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCC---CCEEEEEecCCeEEEEECCCCcEEEEeecc
Confidence 987 789999999999999999 4556665555 4566888888874 347899999999999999999998888888
Q ss_pred CCC---------------eEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccc
Q 013274 190 RDG---------------IMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254 (446)
Q Consensus 190 ~~~---------------v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (446)
... +.++.|+|++ .+++++.||.|++||++++.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~-------------------------- 242 (425)
T 1r5m_A 191 ETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGK-------------------------- 242 (425)
T ss_dssp ---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEE--------------------------
T ss_pred ccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeee--------------------------
Confidence 777 9999999985 368999999999999876432111
Q ss_pred cCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEE
Q 013274 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIR 334 (446)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~ 334 (446)
..+|...|.+++|+|++.+|++++.|+.|+
T Consensus 243 --------------------------------------------------~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~ 272 (425)
T 1r5m_A 243 --------------------------------------------------LIGHHGPISVLEFNDTNKLLLSASDDGTLR 272 (425)
T ss_dssp --------------------------------------------------ECCCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred --------------------------------------------------eccCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 124667899999999999999999999999
Q ss_pred EEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEE
Q 013274 335 LWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYT 413 (446)
Q Consensus 335 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvt 413 (446)
+||+.+++... ....+......+++.+++ .++++ ....+++||+.+++....+.+|...|++++|+|++++|++
T Consensus 273 i~d~~~~~~~~----~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~ 347 (425)
T 1r5m_A 273 IWHGGNGNSQN----CFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAV 347 (425)
T ss_dssp EECSSSBSCSE----EECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEE
T ss_pred EEECCCCccce----EecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEE
Confidence 99998765321 122233455678888888 55544 5578999999999999999999999999999999999999
Q ss_pred eeCCCcEEEeCCCCC
Q 013274 414 GGNDRQILVWCPSRH 428 (446)
Q Consensus 414 gs~D~~v~vW~~~~~ 428 (446)
++.|+.|++|++...
T Consensus 348 ~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 348 AFMDGQVNVYDLKKL 362 (425)
T ss_dssp EETTSCEEEEECHHH
T ss_pred EECCCeEEEEECCCC
Confidence 999999999998744
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.4e-33 Score=272.14 Aligned_cols=282 Identities=17% Similarity=0.245 Sum_probs=221.3
Q ss_pred CCccce--eEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 41 PHKGSI--NSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 41 ~H~~~v--~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
+|...+ +++.|++ ..+++++.|++|++||++++... ... ...|...|.++.|+| ++.+
T Consensus 89 ~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~~------------~~~----~~~~~~~v~~v~~s~-~~~~ 148 (401)
T 4aez_A 89 GIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSVS------------ALA----ETDESTYVASVKWSH-DGSF 148 (401)
T ss_dssp TCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCEE------------EEE----ECCTTCCEEEEEECT-TSSE
T ss_pred CCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcEe------------Eee----ecCCCCCEEEEEECC-CCCE
Confidence 566554 4566653 34788999999999999875421 011 124888999999987 8889
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC-CCceeeeeeCCCCCeEEE
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA-SGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~-~~~~~~~l~~h~~~v~sv 196 (446)
|++|+.|+.|++||+.+++.+..+. +.+.+.++.+. ..++++|+.|+.|++||++ .+.....+.+|.+.|.++
T Consensus 149 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~-----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 149 LSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN-----RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGL 223 (401)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE-----TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred EEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC-----CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEE
Confidence 9999999999999999998887775 34556777663 2489999999999999999 456788899999999999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
.|+|+++. |++|+.|+.|++||++++.+...+
T Consensus 224 ~~~~~~~~-l~s~~~d~~v~iwd~~~~~~~~~~----------------------------------------------- 255 (401)
T 4aez_A 224 AWRSDGLQ-LASGGNDNVVQIWDARSSIPKFTK----------------------------------------------- 255 (401)
T ss_dssp EECTTSSE-EEEEETTSCEEEEETTCSSEEEEE-----------------------------------------------
T ss_pred EEcCCCCE-EEEEeCCCeEEEccCCCCCccEEe-----------------------------------------------
Confidence 99999875 789999999999999865432211
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEee--cCCcEEEEecCcCceeeeeeeEEEe
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAG--SDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs--~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
.+|...|.+++|+|++. ++++|+ .|+.|++||+.+++... ...
T Consensus 256 -----------------------------~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~----~~~- 301 (401)
T 4aez_A 256 -----------------------------TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVN----TVD- 301 (401)
T ss_dssp -----------------------------CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEE----EEE-
T ss_pred -----------------------------cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEE----EEe-
Confidence 24667799999999875 566654 79999999999875321 111
Q ss_pred ecCCCeEEEEcCCCcEEEEeC---CCceEEEEeecCceE--EEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 354 QTSKPIQLATTQDPAVVFVPC---MTAVKAFDIWSGKTC--LTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~~~~~~--~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
.......+++++++..+++.+ .+.+++|++.+++.. ..+.+|.+.|++++|+||+++|++++.|++|++|++...
T Consensus 302 ~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 302 AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 234556788999998888743 468999999987654 457899999999999999999999999999999999765
Q ss_pred C
Q 013274 429 I 429 (446)
Q Consensus 429 ~ 429 (446)
.
T Consensus 382 ~ 382 (401)
T 4aez_A 382 D 382 (401)
T ss_dssp -
T ss_pred c
Confidence 4
No 52
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.8e-34 Score=273.23 Aligned_cols=269 Identities=16% Similarity=0.152 Sum_probs=187.6
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeC------CCeEEE
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY------DHYVKV 130 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~------D~~i~i 130 (446)
.++++++.+.....|++.... ..+|...|.++.|+| ||++|||||. |++|++
T Consensus 17 ~~~~~~~g~~~~~~w~~p~~~---------------------p~~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~ 74 (357)
T 4g56_B 17 NLYFQSNGSSKGSAWGRPVTA---------------------PACMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWV 74 (357)
T ss_dssp --------------------------------------------CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEE
T ss_pred ceEEecCCCccccccCCCCCC---------------------cccccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEE
Confidence 345666777889999875321 136889999999987 8999999997 788999
Q ss_pred EECCCCeee-----EEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee----eeeeCCCCCeEEEEEecC
Q 013274 131 WDTNCTRVV-----MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS----QTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 131 Wd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~----~~l~~h~~~v~sv~~s~~ 201 (446)
|+..++... ....+...+.+++|++.. .+++++.|+.|++||+.+++.. ....+|.+.|.+++|+|+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~----~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd 150 (357)
T 4g56_B 75 FKDPEGAPNESLCTAGVQTEAGVTDVAWVSEK----GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD 150 (357)
T ss_dssp ESSCC---CGGGCSEEEECSSCEEEEEEETTT----EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS
T ss_pred EECCCCCcceeEecccCCCCCCEEEEEEcCCC----CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC
Confidence 998766432 233455668899998853 3566788999999999988643 234589999999999999
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
+++ |++|+.|++|++||++++.++..+
T Consensus 151 g~~-l~sgs~dg~v~iwd~~~~~~~~~~---------------------------------------------------- 177 (357)
T 4g56_B 151 GTQ-AVSGGKDFSVKVWDLSQKAVLKSY---------------------------------------------------- 177 (357)
T ss_dssp SSE-EEEEETTSCEEEEETTTTEEEEEE----------------------------------------------------
T ss_pred CCE-EEEEeCCCeEEEEECCCCcEEEEE----------------------------------------------------
Confidence 985 789999999999999876543322
Q ss_pred ceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeE
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQ 360 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~ 360 (446)
.+|.+.|++++|+|++. ++++++.|++|++||+.+++.... + ...........
T Consensus 178 ------------------------~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~-~~~~~~~~v~~ 231 (357)
T 4g56_B 178 ------------------------NAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR-I-DFCASDTIPTS 231 (357)
T ss_dssp ------------------------CCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB-C-CCTTCCSCEEE
T ss_pred ------------------------cCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee-e-eeccccccccc
Confidence 35778899999999985 789999999999999988754221 1 11111233456
Q ss_pred EEEcCCC-cEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCC-CEEEEeeCCCcEEEeCCCCCCC
Q 013274 361 LATTQDP-AVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD-QELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 361 ~~~~~~~-~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~-~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
++++|+. .++++++ ...+++||+.+++...++.+|.+.|++++|+|++ ++|+|||.|++|+||+++....
T Consensus 232 v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~ 304 (357)
T 4g56_B 232 VTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEV 304 (357)
T ss_dssp EEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEE
T ss_pred hhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcE
Confidence 7888874 5566654 4679999999999999999999999999999997 5799999999999999986643
No 53
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.6e-33 Score=264.52 Aligned_cols=246 Identities=22% Similarity=0.329 Sum_probs=203.2
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
+.+|...|.++.|+| ++++|+||+.|++|++||+.++..+..+.. .+.+..+++++. ..++++|+.|+.|++||+
T Consensus 51 l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~---~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 51 LRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS---GNYVACGGLDNICSIYNL 126 (340)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT---SSEEEEEETTCEEEEEET
T ss_pred ecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC---CCEEEEEeCCCeEEEEEC
Confidence 468999999999986 789999999999999999999888877764 345788888875 458999999999999999
Q ss_pred CCCc----eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccc
Q 013274 178 ASGA----ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSL 253 (446)
Q Consensus 178 ~~~~----~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (446)
.++. ....+.+|.+.|.++.|++++. +++++.|++|++||++++.+...+
T Consensus 127 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~~~~~~~~------------------------ 180 (340)
T 1got_B 127 KTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIETGQQTTTF------------------------ 180 (340)
T ss_dssp TTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTTTEEEEEE------------------------
T ss_pred ccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCCCcEEEEE------------------------
Confidence 8763 4567889999999999998864 689999999999999876543221
Q ss_pred ccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcE
Q 013274 254 SAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRI 333 (446)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i 333 (446)
.+|.+.|.+++|+|++.+|++|+.|++|
T Consensus 181 ----------------------------------------------------~~h~~~v~~~~~~~~~~~l~sg~~d~~v 208 (340)
T 1got_B 181 ----------------------------------------------------TGHTGDVMSLSLAPDTRLFVSGACDASA 208 (340)
T ss_dssp ----------------------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred ----------------------------------------------------cCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 3577889999999999999999999999
Q ss_pred EEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecc--cccceEEEEEcCCCCE
Q 013274 334 RLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRG--HYEYVNCCCFSSQDQE 410 (446)
Q Consensus 334 ~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~g--H~~~v~~~~fSpd~~~ 410 (446)
++||+.++.... .+..+......++++|++..+++++. ..+++||+.+++.+..+.. +...|++++|+|++++
T Consensus 209 ~~wd~~~~~~~~----~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 284 (340)
T 1got_B 209 KLWDVREGMCRQ----TFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRL 284 (340)
T ss_dssp EEEETTTCSEEE----EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred EEEECCCCeeEE----EEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCE
Confidence 999998875321 22223445667889999998888755 5899999998887776653 3457999999999999
Q ss_pred EEEeeCCCcEEEeCCCCCCC
Q 013274 411 LYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 411 lvtgs~D~~v~vW~~~~~~~ 430 (446)
|++|+.|++|+||+......
T Consensus 285 l~~g~~d~~i~vwd~~~~~~ 304 (340)
T 1got_B 285 LLAGYDDFNCNVWDALKADR 304 (340)
T ss_dssp EEEEETTSEEEEEETTTCCE
T ss_pred EEEECCCCeEEEEEcccCcE
Confidence 99999999999999876543
No 54
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.2e-33 Score=284.35 Aligned_cols=363 Identities=15% Similarity=0.188 Sum_probs=246.4
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc---cEeEEEEee
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY---AISSAIWYP 113 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~~~~~~ 113 (446)
..+.+|.+.|++++|+|++..+|++++.|++|++||+.+.... ....+|.. .|.++.++|
T Consensus 154 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~-----------------~~~~~~~~~~~~v~~~~~~~ 216 (615)
T 1pgu_A 154 GEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFS-----------------ASDRTHHKQGSFVRDVEFSP 216 (615)
T ss_dssp EECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEE-----------------EEECSSSCTTCCEEEEEECS
T ss_pred eeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCccee-----------------eeecccCCCCceEEEEEECC
Confidence 3467899999999999754448999999999999998764321 12346887 899999988
Q ss_pred cCCcEEEEEeCCCeEEEEECCCCeeeEEE-----ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNF-----KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
.++.+|++++.|+.|++||+.+++.+..+ .+.+.+..+.++ . ..++++++.|+.|++||+++++....+..
T Consensus 217 ~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~---~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 217 DSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-D---SQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp TTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-S---SSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-C---CCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 33889999999999999999999988887 556678888887 3 35889999999999999999998888887
Q ss_pred C----CCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCC--Ccccccc----------------
Q 013274 189 H----RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRR--PPLLKRK---------------- 246 (446)
Q Consensus 189 h----~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~--~~~~~~~---------------- 246 (446)
| ...+.++.|+ +++. +++++.||.|++||++++..+..+..+...+... +.+....
T Consensus 293 ~~~~~~~~~~~~~~~-~~~~-l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~ 370 (615)
T 1pgu_A 293 DKQQLGNQQVGVVAT-GNGR-IISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQD 370 (615)
T ss_dssp CTTCGGGCEEEEEEE-ETTE-EEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECC
T ss_pred CCCcccCceeEEEeC-CCCe-EEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCc
Confidence 6 4678888886 5554 7899999999999999877766665433211000 0000000
Q ss_pred ----e-eeccc-----cccCCCCCcCCCCcccccc--CCCceeeccc---------------------------------
Q 013274 247 ----V-SISKS-----LSAGQNSSVKPRAPQKRSA--NGNGVRQSSV--------------------------------- 281 (446)
Q Consensus 247 ----~-~~~~~-----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~--------------------------------- 281 (446)
+ .+... ................... ....+..++.
T Consensus 371 ~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 450 (615)
T 1pgu_A 371 HSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGS 450 (615)
T ss_dssp CCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEE
T ss_pred ccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCce
Confidence 0 00000 0000000000000000000 0000000000
Q ss_pred -----ceeecCCcc-ccccCCCcccc--c--ccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEE
Q 013274 282 -----GRIPAKGSV-RQRLHPGMLSS--Q--DRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV 351 (446)
Q Consensus 282 -----~~~~~~~~~-~~~~~~~~~~~--~--~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~ 351 (446)
+...+.+.. ...+....... . ....+|...|++++|+|+|++|++|+.|+.|++||+.+++... .+
T Consensus 451 ~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~----~~ 526 (615)
T 1pgu_A 451 AVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKT----SR 526 (615)
T ss_dssp EEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE----CC
T ss_pred EEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCccee----Ee
Confidence 000000000 00000000000 0 2345788999999999999999999999999999998875321 11
Q ss_pred Ee-ecCCCeEEEEcC----------CCcEEEEeCC-CceEEEEeecC-ceEEEecccccceEEEEEcCCCCEEEEeeCCC
Q 013274 352 RL-QTSKPIQLATTQ----------DPAVVFVPCM-TAVKAFDIWSG-KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 418 (446)
Q Consensus 352 ~~-~~~~~~~~~~~~----------~~~~~~~~~~-~~~~~~d~~~~-~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~ 418 (446)
.. +......++++| ++.++++++. ..+++|++.++ +.+..+.+|.+.|++++|+||++ |+|++.|+
T Consensus 527 ~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~~~d~ 605 (615)
T 1pgu_A 527 WAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSSGADA 605 (615)
T ss_dssp SCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEEETTS
T ss_pred ecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEecCCc
Confidence 11 344566789999 8888888764 58999999988 78899999999999999999999 99999999
Q ss_pred cEEEeCCCC
Q 013274 419 QILVWCPSR 427 (446)
Q Consensus 419 ~v~vW~~~~ 427 (446)
+|++|+++.
T Consensus 606 ~v~iw~~~~ 614 (615)
T 1pgu_A 606 CIKRWNVVL 614 (615)
T ss_dssp CEEEEEEC-
T ss_pred eEEEEeeec
Confidence 999999864
No 55
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-32 Score=272.60 Aligned_cols=279 Identities=20% Similarity=0.295 Sum_probs=220.9
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee-cCC
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP-VDT 116 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~-~~~ 116 (446)
.+.+|.+.|++++|++ ++ +|++|+.||+|++||++++... ....+|...|.++.+.+ .++
T Consensus 157 ~~~~h~~~V~~l~~~~-~~-~l~s~s~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~l~~~~~~~~ 217 (464)
T 3v7d_B 157 QLSGHDGGVWALKYAH-GG-ILVSGSTDRTVRVWDIKKGCCT-----------------HVFEGHNSTVRCLDIVEYKNI 217 (464)
T ss_dssp EECCCSSCEEEEEECS-TT-EEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEEEESSSC
T ss_pred EEeCCCcCEEEEEEcC-CC-EEEEEeCCCCEEEEECCCCcEE-----------------EEECCCCCccEEEEEecCCCC
Confidence 4578999999999986 34 8999999999999999865321 12357999999999986 467
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEE-----------------------Ee-cCCceEEeeeccCCCCceEEEEeeCCCcE
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMN-----------------------FK-MPGKVYRTAMSPLAASHMLIAAGTEDVQV 172 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~-----------------------~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v 172 (446)
.++++|+.|++|++||+.++..... +. +...+..+ . .+..++++|+.|+.|
T Consensus 218 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~---~~~~~l~~~~~d~~i 292 (464)
T 3v7d_B 218 KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--S---GHGNIVVSGSYDNTL 292 (464)
T ss_dssp EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--E---EETTEEEEEETTSCE
T ss_pred CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--c---CCCCEEEEEeCCCeE
Confidence 8999999999999999987653321 11 11222222 2 234589999999999
Q ss_pred EEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 173 ~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
++||+++++.+..+.+|...|.++.|+|+++. +++|+.||+|++||++++.++..+
T Consensus 293 ~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~sg~~dg~i~vwd~~~~~~~~~~----------------------- 348 (464)
T 3v7d_B 293 IVWDVAQMKCLYILSGHTDRIYSTIYDHERKR-CISASMDTTIRIWDLENGELMYTL----------------------- 348 (464)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTTTE-EEEEETTSCEEEEETTTTEEEEEE-----------------------
T ss_pred EEEECCCCcEEEEecCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCcEEEEE-----------------------
Confidence 99999999999999999999999999999885 789999999999999876544322
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCc
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSR 332 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~ 332 (446)
.+|...|.+++|+ +.+|++|+.|++
T Consensus 349 -----------------------------------------------------~~h~~~v~~~~~~--~~~l~s~s~dg~ 373 (464)
T 3v7d_B 349 -----------------------------------------------------QGHTALVGLLRLS--DKFLVSAAADGS 373 (464)
T ss_dssp -----------------------------------------------------CCCSSCEEEEEEC--SSEEEEEETTSE
T ss_pred -----------------------------------------------------eCCCCcEEEEEEc--CCEEEEEeCCCc
Confidence 2566779999997 589999999999
Q ss_pred EEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEE-ecccccceEEEEEcCCCCEE
Q 013274 333 IRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLT-FRGHYEYVNCCCFSSQDQEL 411 (446)
Q Consensus 333 i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~-l~gH~~~v~~~~fSpd~~~l 411 (446)
|++||+.++..... . ........+++.+++.++++++.+.+++||+.+++.+.. +.+|.+.|++++|+ +..++
T Consensus 374 v~vwd~~~~~~~~~-~----~~~~~~~~~~~~~~~~~l~~~~dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~ 447 (464)
T 3v7d_B 374 IRGWDANDYSRKFS-Y----HHTNLSAITTFYVSDNILVSGSENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLV 447 (464)
T ss_dssp EEEEETTTCCEEEE-E----ECTTCCCEEEEEECSSEEEEEETTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEE
T ss_pred EEEEECCCCceeee-e----cCCCCccEEEEEeCCCEEEEecCCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEE
Confidence 99999998653221 1 123344557788899999888888999999999998875 78999999999997 55667
Q ss_pred EEeeCCCcEEEeCC
Q 013274 412 YTGGNDRQILVWCP 425 (446)
Q Consensus 412 vtgs~D~~v~vW~~ 425 (446)
++++.|+.+.+|.+
T Consensus 448 ~~~~~~g~~~i~~l 461 (464)
T 3v7d_B 448 AAVEKDGQSFLEIL 461 (464)
T ss_dssp EEEEETTEEEEEEE
T ss_pred EEEEeCCeEEEEEe
Confidence 77788888777754
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.6e-32 Score=269.74 Aligned_cols=285 Identities=21% Similarity=0.334 Sum_probs=222.2
Q ss_pred eEeCCCccce-eEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 37 EIVSPHKGSI-NSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 37 ~~~~~H~~~v-~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
..+.+|.+.| .++.++ +++|+||+.||+|++||+.++... ....+|...|.++.+.+ +
T Consensus 115 ~~l~~h~~~v~~~~~~~---~~~l~sgs~dg~i~vwd~~~~~~~-----------------~~~~~h~~~V~~l~~~~-~ 173 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQFE---DNYVITGADDKMIRVYDSINKKFL-----------------LQLSGHDGGVWALKYAH-G 173 (464)
T ss_dssp EEEECCSSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEECS-T
T ss_pred EEEcCCCCCcEEEEEEC---CCEEEEEcCCCcEEEEECCCCcEE-----------------EEEeCCCcCEEEEEEcC-C
Confidence 4577898875 677774 469999999999999998765321 12358999999999976 4
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce------------
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI------------ 182 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~------------ 182 (446)
+ ++++|+.|++|++||+.+++.+..+. +.+.+.++.+.+.. +..++++|+.|+.|++||++++..
T Consensus 174 ~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~ 251 (464)
T 3v7d_B 174 G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYK-NIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPL 251 (464)
T ss_dssp T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESS-SCEEEEEEETTSCEEEEECCCCCCC------CCSSE
T ss_pred C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCC-CCCEEEEEcCCCcEEEeeCCCCcccccccccCCcce
Confidence 4 99999999999999999999888776 45667888877542 346899999999999999987652
Q ss_pred -----------eeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 183 -----------SQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 183 -----------~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
...+.+|...|.++. ++++ .+++++.||.|++||+++++++..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~~-~l~~~~~d~~i~vwd~~~~~~~~~~---------------------- 306 (464)
T 3v7d_B 252 VFHTPEENPYFVGVLRGHMASVRTVS--GHGN-IVVSGSYDNTLIVWDVAQMKCLYIL---------------------- 306 (464)
T ss_dssp EESCGGGCTTEEEEECCCSSCEEEEE--EETT-EEEEEETTSCEEEEETTTTEEEEEE----------------------
T ss_pred EeeccCCCeEEEEEccCccceEEEEc--CCCC-EEEEEeCCCeEEEEECCCCcEEEEe----------------------
Confidence 456788999999885 4556 4789999999999999876543322
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
.+|...|.+++|+|++.+|++|+.|+
T Consensus 307 ------------------------------------------------------~~~~~~v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 307 ------------------------------------------------------SGHTDRIYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp ------------------------------------------------------CCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred ------------------------------------------------------cCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 24667899999999999999999999
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEcCCCCE
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 410 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~ 410 (446)
+|++||+.+++.. ..+..+......+.+. +..++++ .+..+++||+.+++....+ .|...+..++|+|++++
T Consensus 333 ~i~vwd~~~~~~~----~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 333 TIRIWDLENGELM----YTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNI 405 (464)
T ss_dssp CEEEEETTTTEEE----EEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSE
T ss_pred cEEEEECCCCcEE----EEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCE
Confidence 9999999987532 1222223333444554 4566665 4568999999887765555 36777899999999999
Q ss_pred EEEeeCCCcEEEeCCCCCCCC
Q 013274 411 LYTGGNDRQILVWCPSRHISD 431 (446)
Q Consensus 411 lvtgs~D~~v~vW~~~~~~~~ 431 (446)
|++|+ |+.|+||++.++...
T Consensus 406 l~~~~-dg~i~iwd~~~g~~~ 425 (464)
T 3v7d_B 406 LVSGS-ENQFNIYNLRSGKLV 425 (464)
T ss_dssp EEEEE-TTEEEEEETTTCCEE
T ss_pred EEEec-CCeEEEEECCCCcEE
Confidence 99999 999999999876543
No 57
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=288.84 Aligned_cols=250 Identities=11% Similarity=0.090 Sum_probs=186.8
Q ss_pred CccceeEEEeecCC-C-------CEEEE-------------------eeCCCcEEEEEcccCcCCCCCCccccccceEEe
Q 013274 42 HKGSINSLQVDLTE-E-------RYLLS-------------------GASDSSVAVYDVQRATDYEGGGHIAKHRSVFVV 94 (446)
Q Consensus 42 H~~~v~~l~~s~~~-~-------~~l~s-------------------~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 94 (446)
+.+.|++|+|+|++ + ++||+ +|.|++|+|||++++... ...
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~----------~~~-- 199 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH----------CVK-- 199 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC----------EEE--
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC----------ceE--
Confidence 56789999998753 1 45555 668899999998765321 000
Q ss_pred ccccccCccccEeEEEEeec-----CCcEEEEEeCCCeEEEEECCCCeee-----------EEEe-cCCceEEeeeccCC
Q 013274 95 DKQHEHGHKYAISSAIWYPV-----DTGLFVTGSYDHYVKVWDTNCTRVV-----------MNFK-MPGKVYRTAMSPLA 157 (446)
Q Consensus 95 ~~~~~~gh~~~V~~~~~~~~-----~~~~l~s~s~D~~i~iWd~~~~~~~-----------~~~~-~~~~~~~~~~~~~~ 157 (446)
.....+|.+.|.++.|+|. ++.+|||++.|++|++||+..+... ..+. +.+.+.++++++.
T Consensus 200 -~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 200 -VQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP- 277 (524)
T ss_dssp -EEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-
T ss_pred -EEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-
Confidence 0112357788999999984 3579999999999999999866421 1222 3356788888752
Q ss_pred CCceEEEEeeCCCcEEEEeCCCCc-eeeeeeCCCCCeEEE--EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccc
Q 013274 158 ASHMLIAAGTEDVQVRLCDIASGA-ISQTLSGHRDGIMTV--EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234 (446)
Q Consensus 158 ~~~~~lasgs~d~~v~vwd~~~~~-~~~~l~~h~~~v~sv--~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~ 234 (446)
..|++|+.|++|++||++++. +...+.+|.+.|.+| .|+|++..+|+|||.|++|+|||++++.+...+
T Consensus 278 ---~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~----- 349 (524)
T 2j04_B 278 ---TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTT----- 349 (524)
T ss_dssp ---SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEE-----
T ss_pred ---CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccc-----
Confidence 269999999999999999874 456789999999999 567776346899999999999999875432211
Q ss_pred cccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccc--cCe
Q 013274 235 QLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY--GAV 312 (446)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v 312 (446)
.+|. +.|
T Consensus 350 -----------------------------------------------------------------------~~~~~~~~v 358 (524)
T 2j04_B 350 -----------------------------------------------------------------------VSRFRGSNL 358 (524)
T ss_dssp -----------------------------------------------------------------------EEECSCCSC
T ss_pred -----------------------------------------------------------------------ccccccCcc
Confidence 1222 247
Q ss_pred EEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEe
Q 013274 313 TGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTF 392 (446)
Q Consensus 313 ~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l 392 (446)
.+|+|+|++..+++++.|++|++||+.++.. ..++
T Consensus 359 ~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~---------------------------------------------~~~l 393 (524)
T 2j04_B 359 VPVVYCPQIYSYIYSDGASSLRAVPSRAAFA---------------------------------------------VHPL 393 (524)
T ss_dssp CCEEEETTTTEEEEECSSSEEEEEETTCTTC---------------------------------------------CEEE
T ss_pred cceEeCCCcCeEEEeCCCCcEEEEECccccc---------------------------------------------ceee
Confidence 7899999999999999999999999876431 2345
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 393 RGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 393 ~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+|.+.|++|+|||++++|+|||.|++|+||++....
T Consensus 394 ~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~ 430 (524)
T 2j04_B 394 VSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRL 430 (524)
T ss_dssp EECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSST
T ss_pred ecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhh
Confidence 6899999999999999999999999999999987543
No 58
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.7e-32 Score=270.14 Aligned_cols=272 Identities=21% Similarity=0.348 Sum_probs=213.3
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|...|++++| ++++|++|+.||+|++||++++... ....+|...|.++.+ ++++|
T Consensus 130 ~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~-----------------~~~~~h~~~v~~l~~---~~~~l 186 (435)
T 1p22_A 130 SETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECK-----------------RILTGHTGSVLCLQY---DERVI 186 (435)
T ss_dssp CSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEE-----------------EEECCCSSCEEEEEC---CSSEE
T ss_pred cCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEE-----------------EEEcCCCCcEEEEEE---CCCEE
Confidence 467788999988 4679999999999999998765421 123589999998876 67899
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee---eeeeCCCCCeEE
Q 013274 120 VTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS---QTLSGHRDGIMT 195 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~---~~l~~h~~~v~s 195 (446)
++|+.|++|++||+.+++.+..+.. .+.+.++.+.+ ..+++|+.|+.|++||++++... ..+.+|...|.+
T Consensus 187 ~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~-----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~ 261 (435)
T 1p22_A 187 ITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN-----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNV 261 (435)
T ss_dssp EEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT-----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC-----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEE
Confidence 9999999999999999988877753 44566666643 37899999999999999988655 678899999999
Q ss_pred EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+.| +++ .+++|+.||+|++||++++.++..+
T Consensus 262 ~~~--~~~-~l~s~~~dg~i~vwd~~~~~~~~~~---------------------------------------------- 292 (435)
T 1p22_A 262 VDF--DDK-YIVSASGDRTIKVWNTSTCEFVRTL---------------------------------------------- 292 (435)
T ss_dssp EEE--ETT-EEEEEETTSEEEEEETTTCCEEEEE----------------------------------------------
T ss_pred EEe--CCC-EEEEEeCCCeEEEEECCcCcEEEEE----------------------------------------------
Confidence 999 445 4789999999999999876543322
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeec
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT 355 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~ 355 (446)
.+|...|.++.| ++.+|++|+.|++|++||+.+++... .+..+.
T Consensus 293 ------------------------------~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~----~~~~h~ 336 (435)
T 1p22_A 293 ------------------------------NGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLR----VLEGHE 336 (435)
T ss_dssp ------------------------------ECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE----EECCCS
T ss_pred ------------------------------cCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEE----EEeCCc
Confidence 245667888888 47899999999999999999875321 122222
Q ss_pred CCCeEEEEcCCCcEEEEeC-CCceEEEEeecCc---------eEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCC
Q 013274 356 SKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGK---------TCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCP 425 (446)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~---------~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~ 425 (446)
.....+++ ++..+++++ .+.+++||+.+++ .+..+.+|.+.|++++| |+++|+||+.|++|++|++
T Consensus 337 ~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~ 412 (435)
T 1p22_A 337 ELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDF 412 (435)
T ss_dssp SCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC-
T ss_pred CcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEEC
Confidence 23333444 666776665 4689999998766 78899999999999999 8899999999999999998
Q ss_pred CCC
Q 013274 426 SRH 428 (446)
Q Consensus 426 ~~~ 428 (446)
...
T Consensus 413 ~~~ 415 (435)
T 1p22_A 413 LND 415 (435)
T ss_dssp ---
T ss_pred CCC
Confidence 754
No 59
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-32 Score=293.84 Aligned_cols=367 Identities=16% Similarity=0.172 Sum_probs=236.7
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEec----c-ccccCccccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVD----K-QHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~gh~~~V~~~~~~~~~ 115 (446)
.|.+.|++++|+| ++++|++|+.||+|++||++++.... +... . ....+|.+.|.++.|+|.+
T Consensus 96 ~~~~~V~~v~~sp-~g~~l~sgs~dg~V~lwd~~~~~~~~-----------~~i~~~~~~~~~~~~h~~~V~sl~~sp~~ 163 (902)
T 2oaj_A 96 FVPGKITSIDTDA-SLDWMLIGLQNGSMIVYDIDRDQLSS-----------FKLDNLQKSSFFPAARLSPIVSIQWNPRD 163 (902)
T ss_dssp ECSSCEEEEECCT-TCSEEEEEETTSCEEEEETTTTEEEE-----------EEECCHHHHHTCSSSCCCCCCEEEEETTE
T ss_pred cCCCCEEEEEECC-CCCEEEEEcCCCcEEEEECCCCcccc-----------ceeccccccccccccCCCCeEEEEEccCC
Confidence 3678999999997 67899999999999999997653210 0000 0 2236899999999999866
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecC-------------------CceEEeeeccCCCCceEEEEeeCCCcEEEEe
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-------------------GKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd 176 (446)
+.++++|+.|++| +||+.+++++..+... ..+.+++|+|+ ..+|++|+.|+.|++||
T Consensus 164 ~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspd---g~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 164 IGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPN---SLHIITIHEDNSLVFWD 239 (902)
T ss_dssp EEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTT---SSEEEEEETTCCEEEEE
T ss_pred CCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCC---CCEEEEEECCCeEEEEE
Confidence 7799999999999 9999999888777643 45888999885 45899999999999999
Q ss_pred CCCCceeee--e---eC-------------CCCCeEEEEEec----CCCeEEEEeeCC-----CcEEEEEcc--------
Q 013274 177 IASGAISQT--L---SG-------------HRDGIMTVEWST----SSEWILVTGGCD-----GAIRFWDIR-------- 221 (446)
Q Consensus 177 ~~~~~~~~~--l---~~-------------h~~~v~sv~~s~----~~~~~l~S~s~D-----g~I~iWd~~-------- 221 (446)
+++++++.. + .. |.+.|.+++|++ ++..++++|+.| ..+++|++.
T Consensus 240 ~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~ 319 (902)
T 2oaj_A 240 ANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSIT 319 (902)
T ss_dssp TTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGC
T ss_pred CCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCcccc
Confidence 999887542 3 12 355799999964 334567888776 379999852
Q ss_pred ----------CCceeEEeec-cccc--------------ccCC-Cc-ccc----cceeeccccccCC--CC--------C
Q 013274 222 ----------RAGCFRVLDQ-SQSQ--------------LGRR-PP-LLK----RKVSISKSLSAGQ--NS--------S 260 (446)
Q Consensus 222 ----------~~~~~~~~~~-~~~~--------------~~~~-~~-~~~----~~~~~~~~~~~~~--~~--------~ 260 (446)
...+.+.+.. .... .+.. +. ++. ..+.. ..+.... .. .
T Consensus 320 s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~-~~~~~g~~~~~~~~~~~~l~ 398 (902)
T 2oaj_A 320 SYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIET-MLYPSGIFTDKASLFPQNLS 398 (902)
T ss_dssp CHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEE-EETTTCCEECCGGGSCGGGT
T ss_pred chhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEE-EECCCCCcccccccCCCccc
Confidence 1122222210 0000 0000 00 000 00000 0000000 00 0
Q ss_pred cCC--------------------------CC-ccccccCCCceeecccceeecCCccccccCCCcccccc-----c----
Q 013274 261 VKP--------------------------RA-PQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQD-----R---- 304 (446)
Q Consensus 261 ~~~--------------------------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~---- 304 (446)
.+. .. ..........+..++.+...+.+..+..+..+...... .
T Consensus 399 ~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~ 478 (902)
T 2oaj_A 399 WLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVN 478 (902)
T ss_dssp TBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEE
T ss_pred ccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEee
Confidence 000 00 00000001123344555555554433322211111000 0
Q ss_pred c-----cccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCcee-----------------------------------
Q 013274 305 A-----TAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT----------------------------------- 344 (446)
Q Consensus 305 ~-----~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~----------------------------------- 344 (446)
. .+|...|.+|+|+|||++||+|+.|++|+|||+.+++..
T Consensus 479 l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 558 (902)
T 2oaj_A 479 LSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAP 558 (902)
T ss_dssp HHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCC
T ss_pred chhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCC
Confidence 0 178889999999999999999999999999999875310
Q ss_pred ------eeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEE-----Eec-ccccceEEEEEc-----C
Q 013274 345 ------LVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCL-----TFR-GHYEYVNCCCFS-----S 406 (446)
Q Consensus 345 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~-----~l~-gH~~~v~~~~fS-----p 406 (446)
+..+..+..+......++++|++ ++++++. ..+++||+.++..+. .+. +|.+.|++|+|| |
T Consensus 559 ~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~ 637 (902)
T 2oaj_A 559 TGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGD 637 (902)
T ss_dssp TTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTT
T ss_pred CCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCC
Confidence 00112223344566778999999 8887765 568999987776543 343 999999999999 8
Q ss_pred CC---CEEEEeeCCCcEEEeCC
Q 013274 407 QD---QELYTGGNDRQILVWCP 425 (446)
Q Consensus 407 d~---~~lvtgs~D~~v~vW~~ 425 (446)
|| ++|++|+.|++|++|++
T Consensus 638 Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 638 DGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp SSSEEEEEEEEETTSEEEEEEE
T ss_pred CCCcceEEEEEecCCcEEEEEE
Confidence 85 89999999999999998
No 60
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.3e-33 Score=307.26 Aligned_cols=367 Identities=18% Similarity=0.225 Sum_probs=254.6
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-CC
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV-DT 116 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~-~~ 116 (446)
.+.+|.+.|++++|+| ++++|++|+.|++|+|||+.++... ....+|...|.++.++|. +.
T Consensus 652 ~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~v~vwd~~~~~~~-----------------~~~~~~~~~v~~~~~~~~~~~ 713 (1249)
T 3sfz_A 652 DIKAHEDEVLCCAFSS-DDSYIATCSADKKVKIWDSATGKLV-----------------HTYDEHSEQVNCCHFTNKSNH 713 (1249)
T ss_dssp EECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEE-----------------EEEECCSSCEEEEEECSSSSC
T ss_pred EeccCCCCEEEEEEec-CCCEEEEEeCCCeEEEEECCCCceE-----------------EEEcCCCCcEEEEEEecCCCc
Confidence 4678999999999997 6789999999999999999875421 123479999999999874 45
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee---------
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL--------- 186 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l--------- 186 (446)
.++++|+.|++|++||+.++.++..+. +.+.+.++++++. ..++++++.|+.|++||+.++.....+
T Consensus 714 ~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~---~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 790 (1249)
T 3sfz_A 714 LLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPD---DELLASCSADGTLRLWDVRSANERKSINVKRFFLSS 790 (1249)
T ss_dssp CEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSS---TTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC---
T ss_pred eEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecC---CCEEEEEECCCeEEEEeCCCCcccceeccccccccc
Confidence 589999999999999999998877665 4556788888874 348999999999999998776433221
Q ss_pred ----------------------------------------------eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEc
Q 013274 187 ----------------------------------------------SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220 (446)
Q Consensus 187 ----------------------------------------------~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~ 220 (446)
.+|...|.+++|+|+++. +++++.||.|++||+
T Consensus 791 ~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~~dg~v~vwd~ 869 (1249)
T 3sfz_A 791 EDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHL-AVIALSQYCVELWNI 869 (1249)
T ss_dssp -----CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTE-EEEECSSSCEEEEET
T ss_pred CCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCE-EEEEeCCCeEEEEEc
Confidence 278889999999999885 789999999999999
Q ss_pred cCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCC------------CCcc--c------------------
Q 013274 221 RRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKP------------RAPQ--K------------------ 268 (446)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~--~------------------ 268 (446)
.++.+...+..+...+............ .+......... .... .
T Consensus 870 ~~~~~~~~~~~h~~~v~~v~~spdg~~l----~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 945 (1249)
T 3sfz_A 870 DSRLKVADCRGHLSWVHGVMFSPDGSSF----LTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRG 945 (1249)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEE----EEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSS
T ss_pred CCCceeeecCCCccceEEEEECCCCCEE----EEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcc
Confidence 9988777665433221100000000000 00000000000 0000 0
Q ss_pred --------------cccCCCceeecccceeecCCccccccC---CCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 269 --------------RSANGNGVRQSSVGRIPAKGSVRQRLH---PGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 269 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
.......+..++.+...+.+.....+. ...........+|.+.|++++|+|+|++|++++.|+
T Consensus 946 ~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg 1025 (1249)
T 3sfz_A 946 LQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDS 1025 (1249)
T ss_dssp EEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSS
T ss_pred eEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCC
Confidence 000000112222222222111111110 000011122457899999999999999999999999
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEE
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQEL 411 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~l 411 (446)
+|++||+.+++... ...+......+.+.+++.++.......+++||+.+++....+.+|.+.|++++|+||+++|
T Consensus 1026 ~i~vwd~~~~~~~~-----~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l 1100 (1249)
T 3sfz_A 1026 VIQVWNWQTGDYVF-----LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKF 1100 (1249)
T ss_dssp BEEEEETTTTEEEC-----CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSC
T ss_pred EEEEEECCCCceEE-----EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEE
Confidence 99999999875321 1122344556778888777777777899999999999999999999999999999999999
Q ss_pred EEeeCCCcEEEeCCCCCCCCCcCC
Q 013274 412 YTGGNDRQILVWCPSRHISDGVDA 435 (446)
Q Consensus 412 vtgs~D~~v~vW~~~~~~~~~~~~ 435 (446)
++++.|++|++|+...........
T Consensus 1101 ~s~s~d~~v~iwd~~~~~~~~~l~ 1124 (1249)
T 3sfz_A 1101 SSTSADKTAKIWSFDLLSPLHELK 1124 (1249)
T ss_dssp EEECCSSCCCEECSSSSSCSBCCC
T ss_pred EEEcCCCcEEEEECCCcceeeeec
Confidence 999999999999998665443433
No 61
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-33 Score=267.26 Aligned_cols=260 Identities=19% Similarity=0.317 Sum_probs=203.2
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-C
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV-D 115 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~-~ 115 (446)
.++.+|.+.|++|+|+| ++++|++|+.||+|+|||+..... .. .....+|...|.++.|++. +
T Consensus 5 ~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~----------~~-----~~~~~~h~~~v~~~~~~~~~~ 68 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH----------KL-----IDTLTGHEGPVWRVDWAHPKF 68 (379)
T ss_dssp CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE----------EE-----EEEECCCSSCEEEEEECCGGG
T ss_pred EEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcc----------ee-----eeEecCCCCcEEEEEeCCCCC
Confidence 34679999999999997 678999999999999999873221 00 1123589999999999753 3
Q ss_pred CcEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc--eeeeeeCCC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--ISQTLSGHR 190 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~--~~~~l~~h~ 190 (446)
+.+|++|+.|++|++||+.+++ .+..+. +...+.++++++... ..++++++.|+.|++||++++. ....+.+|.
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY-GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG-CSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCC-CCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 7899999999999999999886 444443 445688888887521 3589999999999999999873 445678999
Q ss_pred CCeEEEEEec-------------CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 191 DGIMTVEWST-------------SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 191 ~~v~sv~~s~-------------~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
..|.++.|+| ++. .|++++.||.|++||++++.....+
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~---------------------------- 198 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVL---------------------------- 198 (379)
T ss_dssp TCEEEEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEE----------------------------
T ss_pred CceEEEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceee----------------------------
Confidence 9999999999 465 5789999999999999764321100
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC---CCEEEEeecCCcEE
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED---GMYLLSAGSDSRIR 334 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d---g~~l~sgs~D~~i~ 334 (446)
.....+|.++|.+++|+|+ +.+|++++.|+.|+
T Consensus 199 --------------------------------------------~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~ 234 (379)
T 3jrp_A 199 --------------------------------------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 234 (379)
T ss_dssp --------------------------------------------EEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEE
T ss_pred --------------------------------------------EEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEE
Confidence 0012367788999999999 89999999999999
Q ss_pred EEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEe
Q 013274 335 LWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 335 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtg 414 (446)
+||+.++...... .......|...|++++|+||+++|+++
T Consensus 235 iwd~~~~~~~~~~----------------------------------------~~~~~~~~~~~v~~~~~s~~g~~l~~~ 274 (379)
T 3jrp_A 235 IWTQDNEQGPWKK----------------------------------------TLLKEEKFPDVLWRASWSLSGNVLALS 274 (379)
T ss_dssp EEEESSTTSCCEE----------------------------------------EESSSSCCSSCEEEEEECSSSCCEEEE
T ss_pred EEeCCCCCcccee----------------------------------------eeeccccCCCcEEEEEEcCCCCEEEEe
Confidence 9999875321100 001123488899999999999999999
Q ss_pred eCCCcEEEeCCC
Q 013274 415 GNDRQILVWCPS 426 (446)
Q Consensus 415 s~D~~v~vW~~~ 426 (446)
+.|+.|++|+++
T Consensus 275 ~~dg~i~iw~~~ 286 (379)
T 3jrp_A 275 GGDNKVTLWKEN 286 (379)
T ss_dssp ESSSSEEEEEEE
T ss_pred cCCCcEEEEeCC
Confidence 999999999886
No 62
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=7.2e-33 Score=262.94 Aligned_cols=285 Identities=12% Similarity=0.085 Sum_probs=225.5
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
+..+|.+.|++++|+| ++++|++|+.|++|+|||+.++... ... ....+|...|.++.++| ++.
T Consensus 6 ~~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~---------~~~-----~~~~~~~~~v~~~~~~~-~~~ 69 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKN---------VDL-----LQSLRYKHPLLCCNFID-NTD 69 (342)
T ss_dssp CSSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTE---------EEE-----EEEEECSSCEEEEEEEE-SSS
T ss_pred cccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCcc---------ccc-----eeeeecCCceEEEEECC-CCC
Confidence 4568999999999997 5789999999999999999765310 000 11237889999999998 688
Q ss_pred -EEEEEeCCCeEEEEEC-CCCeeeEEEe--cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC---------Cceee
Q 013274 118 -LFVTGSYDHYVKVWDT-NCTRVVMNFK--MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS---------GAISQ 184 (446)
Q Consensus 118 -~l~s~s~D~~i~iWd~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~---------~~~~~ 184 (446)
+|++|+.|++|++||+ .+++...... +.+.+..+.+.+ ..++++++.|+.|++||+++ ++++.
T Consensus 70 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 145 (342)
T 1yfq_A 70 LQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG----DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSN 145 (342)
T ss_dssp EEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET----TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSS
T ss_pred cEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC----CCEEEEEcCCCeEEEEcccccccccccccCCeee
Confidence 9999999999999999 8876644333 556688888887 24789999999999999988 77777
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC-CceeEEeecccccccCCCcccccceeeccccccCCCCCcCC
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKP 263 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (446)
.+. |...|.+++|+|++ +++++.|+.|++||+++ ......
T Consensus 146 ~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~----------------------------------- 186 (342)
T 1yfq_A 146 NTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGT----------------------------------- 186 (342)
T ss_dssp SSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCE-----------------------------------
T ss_pred EEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccce-----------------------------------
Confidence 776 89999999999874 68999999999999875 321000
Q ss_pred CCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecCCcEEEEecCcC-
Q 013274 264 RAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSDSRIRLWDVESG- 341 (446)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D~~i~lWd~~~~- 341 (446)
.....|...|.+++|+| ++.+|++++.|+.|++|++...
T Consensus 187 ---------------------------------------~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 187 ---------------------------------------IEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp ---------------------------------------EEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred ---------------------------------------eeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 00123556799999999 9999999999999999999875
Q ss_pred ----ceeeeeeeEEEeecC---------CCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEeccc-ccceEEEEEcC
Q 013274 342 ----RNTLVNFETVRLQTS---------KPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGH-YEYVNCCCFSS 406 (446)
Q Consensus 342 ----~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH-~~~v~~~~fSp 406 (446)
......+ ..+.. ....++++|++.++++++. ..+++||+.+++.+.++.+| .+.|++++ |
T Consensus 228 ~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~ 302 (342)
T 1yfq_A 228 DDYNSSKRFAF---RCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--C 302 (342)
T ss_dssp CSTTCTTCEEE---ECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--E
T ss_pred cccccccceee---ecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--C
Confidence 1111112 22211 4556788998888777654 58999999999999999999 99999999 9
Q ss_pred CCCEEEEeeCCCc-EEEeCC
Q 013274 407 QDQELYTGGNDRQ-ILVWCP 425 (446)
Q Consensus 407 d~~~lvtgs~D~~-v~vW~~ 425 (446)
|+++|++|+.|++ .+.|..
T Consensus 303 ~~~~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 303 SDNILCLATSDDTFKTNAAI 322 (342)
T ss_dssp CSSEEEEEEECTHHHHCSSS
T ss_pred CCCeEEEEecCCcccccccc
Confidence 9999999999999 777764
No 63
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.9e-31 Score=263.23 Aligned_cols=277 Identities=23% Similarity=0.411 Sum_probs=219.0
Q ss_pred eEeCCCccce-eEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 37 EIVSPHKGSI-NSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 37 ~~~~~H~~~v-~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
.++.+|.+.| .++.++ +++|++|+.||+|++||+.++... ....+|...|.++.+.
T Consensus 112 ~~l~~h~~~v~~~~~~~---g~~l~sg~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~~~~~--- 168 (445)
T 2ovr_B 112 KVLKGHDDHVITCLQFC---GNRIVSGSDDNTLKVWSAVTGKCL-----------------RTLVGHTGGVWSSQMR--- 168 (445)
T ss_dssp EEEECSTTSCEEEEEEE---TTEEEEEETTSCEEEEETTTCCEE-----------------EECCCCSSCEEEEEEE---
T ss_pred EEecccCCCcEEEEEEc---CCEEEEEECCCcEEEEECCCCcEE-----------------EEEcCCCCCEEEEEec---
Confidence 4578999875 666653 679999999999999999765421 1235899999998885
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
+.++++|+.|++|++||+.+++.+..+.. .+.+.++.+. ...+++|+.|+.|++||+++++.+..+.+|...|.
T Consensus 169 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~-----~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~ 243 (445)
T 2ovr_B 169 DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH-----EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVR 243 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE-----TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEE
T ss_pred CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec-----CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEE
Confidence 56999999999999999999988877763 4456666663 24689999999999999999999999999999999
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
++.| +++. +++|+.||.|++||++++.++..+
T Consensus 244 ~~~~--~~~~-l~~~~~dg~i~iwd~~~~~~~~~~--------------------------------------------- 275 (445)
T 2ovr_B 244 CVQY--DGRR-VVSGAYDFMVKVWDPETETCLHTL--------------------------------------------- 275 (445)
T ss_dssp EEEE--CSSC-EEEEETTSCEEEEEGGGTEEEEEE---------------------------------------------
T ss_pred EEEE--CCCE-EEEEcCCCEEEEEECCCCcEeEEe---------------------------------------------
Confidence 9999 4554 789999999999999876543322
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
.+|.+.|.++.| ++.++++|+.|++|++||+.+++... .+..+
T Consensus 276 -------------------------------~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~----~~~~~ 318 (445)
T 2ovr_B 276 -------------------------------QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIH----TLTGH 318 (445)
T ss_dssp -------------------------------CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEE----EECCC
T ss_pred -------------------------------cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEE----EEcCC
Confidence 246677999998 88999999999999999999875321 11111
Q ss_pred cCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecc---cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 355 TSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRG---HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~g---H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
..... ...+++..+++++ .+.+++||+.+++....+.+ |...|++++|+ +++|++|+.|++|++|++..+..
T Consensus 319 ~~~v~--~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~ 394 (445)
T 2ovr_B 319 QSLTS--GMELKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEF 394 (445)
T ss_dssp CSCEE--EEEEETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCE
T ss_pred cccEE--EEEEeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCce
Confidence 22222 3333455666654 56899999999999999987 89999999995 68999999999999999986653
No 64
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.1e-32 Score=258.67 Aligned_cols=282 Identities=18% Similarity=0.244 Sum_probs=223.3
Q ss_pred CccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
|.+.|++++|+| ++++++++..++.+.+|+..... +.+ ...+|...|.++.++| +++++++
T Consensus 8 ~~~~v~~~~~s~-dg~~~~~~~~~~~~~~~~~~~~~-----------~~~------~~~~h~~~v~~~~~~~-~~~~l~~ 68 (337)
T 1gxr_A 8 GSKPAYSFHVTA-DGQMQPVPFPPDALIGPGIPRHA-----------RQI------NTLNHGEVVCAVTISN-PTRHVYT 68 (337)
T ss_dssp EEEECCEEEECS-SSCEEECCCCTTSSSSTTCCSEE-----------EEE------EEECCSSCCCEEEECS-SSSEEEE
T ss_pred cCCceeEEEECC-CCCEEEeecCCCcEeccccCCcc-----------ccc------eeccCCCceEEEEEec-CCcEEEE
Confidence 567899999997 67889888877777666433211 000 1137899999999987 7889999
Q ss_pred EeCCCeEEEEECCCCee---eEEE---ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc--eeeeeeCCCCCe
Q 013274 122 GSYDHYVKVWDTNCTRV---VMNF---KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--ISQTLSGHRDGI 193 (446)
Q Consensus 122 ~s~D~~i~iWd~~~~~~---~~~~---~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~--~~~~l~~h~~~v 193 (446)
++ |++|++||+.++.. +..+ ...+.+.++++++. ..++++++.|+.|++||+++++ ....+.+|...|
T Consensus 69 ~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i 144 (337)
T 1gxr_A 69 GG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPD---GCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPAC 144 (337)
T ss_dssp EC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTT---SSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCE
T ss_pred cC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCC---CCEEEEEcCCCcEEEEECCCCCcceeeecccCCCce
Confidence 99 99999999987643 2222 24556788888874 4588999999999999999887 567788999999
Q ss_pred EEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCC
Q 013274 194 MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG 273 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (446)
.+++|+|+++. +++++.||.|++||+++++....+
T Consensus 145 ~~~~~~~~~~~-l~~~~~dg~v~~~d~~~~~~~~~~-------------------------------------------- 179 (337)
T 1gxr_A 145 YALAISPDSKV-CFSCCSDGNIAVWDLHNQTLVRQF-------------------------------------------- 179 (337)
T ss_dssp EEEEECTTSSE-EEEEETTSCEEEEETTTTEEEEEE--------------------------------------------
T ss_pred EEEEECCCCCE-EEEEeCCCcEEEEeCCCCceeeee--------------------------------------------
Confidence 99999999875 789999999999999875433221
Q ss_pred CceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEe
Q 013274 274 NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
.+|.+.|.+++|+|++.+|++++.|+.|++||+.+++.... . .
T Consensus 180 --------------------------------~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~----~-~ 222 (337)
T 1gxr_A 180 --------------------------------QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQ----H-D 222 (337)
T ss_dssp --------------------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE----E-E
T ss_pred --------------------------------ecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEee----e-c
Confidence 24567799999999999999999999999999998753211 1 1
Q ss_pred ecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 354 QTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.......++++|++..+++++ ...+++|++.+++. ..+.+|...|.+++|+||+++|++++.|+.|++|+++...
T Consensus 223 ~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 234456788899988887765 46899999987765 5788999999999999999999999999999999987654
No 65
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.5e-32 Score=258.84 Aligned_cols=249 Identities=18% Similarity=0.232 Sum_probs=197.5
Q ss_pred ccCccc-cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEE----ecCCceEEeeeccCCCCceEEEEeeCCCcEE
Q 013274 99 EHGHKY-AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNF----KMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173 (446)
Q Consensus 99 ~~gh~~-~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~ 173 (446)
..+|.. .|+++.|+| ++++||||+.|++|+|||+.++...... .+.+.+.+++++|. ..+|++|+.|+.|+
T Consensus 11 ~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~---g~~l~s~s~D~~v~ 86 (345)
T 3fm0_A 11 VPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC---GNYLASASFDATTC 86 (345)
T ss_dssp ECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT---SSEEEEEETTSCEE
T ss_pred ecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC---CCEEEEEECCCcEE
Confidence 357887 899999987 8899999999999999999887644322 23456888899885 45899999999999
Q ss_pred EEeCCCCc--eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 174 LCDIASGA--ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 174 vwd~~~~~--~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
+||++++. .+..+.+|.+.|.+++|+|+++. |+||+.|++|++||++.......+
T Consensus 87 iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~s~D~~v~iwd~~~~~~~~~~---------------------- 143 (345)
T 3fm0_A 87 IWKKNQDDFECVTTLEGHENEVKSVAWAPSGNL-LATCSRDKSVWVWEVDEEDEYECV---------------------- 143 (345)
T ss_dssp EEEECCC-EEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSCEEEEEECTTSCEEEE----------------------
T ss_pred EEEccCCCeEEEEEccCCCCCceEEEEeCCCCE-EEEEECCCeEEEEECCCCCCeEEE----------------------
Confidence 99998774 57789999999999999999885 799999999999998754211110
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
....+|...|.+++|+|++.+|++|+.|+
T Consensus 144 ---------------------------------------------------~~~~~h~~~v~~~~~~p~~~~l~s~s~d~ 172 (345)
T 3fm0_A 144 ---------------------------------------------------SVLNSHTQDVKHVVWHPSQELLASASYDD 172 (345)
T ss_dssp ---------------------------------------------------EEECCCCSCEEEEEECSSSSCEEEEETTS
T ss_pred ---------------------------------------------------EEecCcCCCeEEEEECCCCCEEEEEeCCC
Confidence 01235778899999999999999999999
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecC---------------ceEEEecc-
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG---------------KTCLTFRG- 394 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~---------------~~~~~l~g- 394 (446)
+|++||+.++.... ...+..+......++++|++..+++++. ..+++|+.... +.+.++.+
T Consensus 173 ~i~~w~~~~~~~~~--~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (345)
T 3fm0_A 173 TVKLYREEEDDWVC--CATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGF 250 (345)
T ss_dssp CEEEEEEETTEEEE--EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSS
T ss_pred cEEEEEecCCCEEE--EEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCC
Confidence 99999988754221 1222333455667899999998888754 68999997432 23445665
Q ss_pred cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 395 HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 395 H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
|...|++++|+|++..|++++.|++|++|+.+.
T Consensus 251 h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~ 283 (345)
T 3fm0_A 251 HSRTIYDIAWCQLTGALATACGDDAIRVFQEDP 283 (345)
T ss_dssp CSSCEEEEEECTTTCCEEEEETTSCEEEEEECT
T ss_pred CCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCC
Confidence 999999999999999999999999999998754
No 66
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=2.4e-31 Score=262.52 Aligned_cols=278 Identities=21% Similarity=0.343 Sum_probs=218.9
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|++++|+ +.+|++|+.||+|++||++++... ....+|...|.++.+. ++
T Consensus 154 ~~~~h~~~v~~~~~~---~~~l~s~~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~~~~~---~~ 210 (445)
T 2ovr_B 154 TLVGHTGGVWSSQMR---DNIIISGSTDRTLKVWNAETGECI-----------------HTLYGHTSTVRCMHLH---EK 210 (445)
T ss_dssp ECCCCSSCEEEEEEE---TTEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEEE---TT
T ss_pred EEcCCCCCEEEEEec---CCEEEEEeCCCeEEEEECCcCcEE-----------------EEECCCCCcEEEEEec---CC
Confidence 467899999999997 368999999999999999765321 1235789999988874 56
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEE
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv 196 (446)
.+++|+.|++|++||+.+++.+..+.. .+.+.++.+ +..++++|+.|+.|++||+++++.+..+.+|...|.++
T Consensus 211 ~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~-----~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 285 (445)
T 2ovr_B 211 RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY-----DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSL 285 (445)
T ss_dssp EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-----CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEE
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-----CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEE
Confidence 899999999999999999988877653 445666666 23578999999999999999999999999999999999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
.| ++. .+++++.||.|++||++++.++..+
T Consensus 286 ~~--~~~-~l~~~~~d~~i~i~d~~~~~~~~~~----------------------------------------------- 315 (445)
T 2ovr_B 286 QF--DGI-HVVSGSLDTSIRVWDVETGNCIHTL----------------------------------------------- 315 (445)
T ss_dssp EE--CSS-EEEEEETTSCEEEEETTTCCEEEEE-----------------------------------------------
T ss_pred EE--CCC-EEEEEeCCCeEEEEECCCCCEEEEE-----------------------------------------------
Confidence 99 555 4789999999999999876543322
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecC
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS 356 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 356 (446)
.+|...+.++.+ ++.+|++|+.|+.|++||+.+++... .+.....+..
T Consensus 316 -----------------------------~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~ 363 (445)
T 2ovr_B 316 -----------------------------TGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKTGQCLQ-TLQGPNKHQS 363 (445)
T ss_dssp -----------------------------CCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEE-EECSTTSCSS
T ss_pred -----------------------------cCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCCCcEEE-EEccCCCCCC
Confidence 234556777666 46799999999999999998875321 1111000122
Q ss_pred CCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEe-----cccccceEEEEEcCCCCEEEEeeCCCc----EEEeCCC
Q 013274 357 KPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTF-----RGHYEYVNCCCFSSQDQELYTGGNDRQ----ILVWCPS 426 (446)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l-----~gH~~~v~~~~fSpd~~~lvtgs~D~~----v~vW~~~ 426 (446)
....+++ ++..+++++ .+.+++||+.+++.+..+ .+|.+.|++++|+|++.+|++|+.|++ |.||+.+
T Consensus 364 ~v~~~~~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 364 AVTCLQF--NKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp CEEEEEE--CSSEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred CEEEEEE--CCCEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 2333444 456666665 568999999999998888 589999999999999999999999998 9999886
Q ss_pred C
Q 013274 427 R 427 (446)
Q Consensus 427 ~ 427 (446)
.
T Consensus 442 ~ 442 (445)
T 2ovr_B 442 V 442 (445)
T ss_dssp C
T ss_pred C
Confidence 4
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.7e-32 Score=257.82 Aligned_cols=294 Identities=12% Similarity=0.110 Sum_probs=223.7
Q ss_pred eEeCCCccceeEEEeecCC--CCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec
Q 013274 37 EIVSPHKGSINSLQVDLTE--ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~--~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~ 114 (446)
.++.+|.+.|++|+|+|++ +++|++|+.||+|+|||+++.... + .....+|...|.++.|+|
T Consensus 33 ~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~-----------~----~~~~~~h~~~v~~~~~~~- 96 (368)
T 3mmy_A 33 EVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT-----------I----PKAQQMHTGPVLDVCWSD- 96 (368)
T ss_dssp ECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE-----------E----EEEEEECSSCEEEEEECT-
T ss_pred EeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce-----------e----EEEeccccCCEEEEEECc-
Confidence 3467999999999999864 689999999999999999762210 0 012347999999999987
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
++++|++++.|++|++||+.+++.+....+.+.+.++.+.+. ++..+|++++.|+.|++||+++++.+..+..|. .+.
T Consensus 97 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~ 174 (368)
T 3mmy_A 97 DGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKA-PNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCY 174 (368)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEEC-SSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEE
T ss_pred CCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeC-CCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-Cce
Confidence 888999999999999999999998887778888888888332 244689999999999999999999888888765 677
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
++.+.++ .+++++.|+.+++||++.........
T Consensus 175 ~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------------------------- 207 (368)
T 3mmy_A 175 CADVIYP---MAVVATAERGLIVYQLENQPSEFRRI-------------------------------------------- 207 (368)
T ss_dssp EEEEETT---EEEEEEGGGCEEEEECSSSCEEEEEC--------------------------------------------
T ss_pred EEEecCC---eeEEEeCCCcEEEEEeccccchhhhc--------------------------------------------
Confidence 7777653 35788889999999997643210000
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE----EEEeecCCcEEEEecCcCce--eeeee
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY----LLSAGSDSRIRLWDVESGRN--TLVNF 348 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~----l~sgs~D~~i~lWd~~~~~~--~~~~~ 348 (446)
...+...+.++.+.+++.. +++++.|+.|++||+..... ....+
T Consensus 208 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~ 257 (368)
T 3mmy_A 208 ------------------------------ESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTF 257 (368)
T ss_dssp ------------------------------CCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEE
T ss_pred ------------------------------cccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceee
Confidence 0011123455666655544 99999999999999987532 11111
Q ss_pred eEEEe---------ecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCC
Q 013274 349 ETVRL---------QTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDR 418 (446)
Q Consensus 349 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~ 418 (446)
..... +......++++|++..+++++ ...+++||+.+++.+..+.+|...|++++|+||+++|++||.|+
T Consensus 258 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~ 337 (368)
T 3mmy_A 258 KCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYD 337 (368)
T ss_dssp ECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCC
T ss_pred eeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccc
Confidence 11000 001355688999988877765 46799999999999999999999999999999999999999998
Q ss_pred cEEEeCC
Q 013274 419 QILVWCP 425 (446)
Q Consensus 419 ~v~vW~~ 425 (446)
..+.|+.
T Consensus 338 ~~~~~~~ 344 (368)
T 3mmy_A 338 WSKGHEF 344 (368)
T ss_dssp STTCGGG
T ss_pred ccccccc
Confidence 7666654
No 68
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.7e-32 Score=285.72 Aligned_cols=291 Identities=17% Similarity=0.290 Sum_probs=235.6
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
...+.+|++.|++++|+| ++++|++|+.||+|+|||+.++... ....+|...|.++.|+| +
T Consensus 6 ~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~~~-----------------~~~~~~~~~v~~~~~s~-~ 66 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQVEV-----------------RSIQVTETPVRAGKFIA-R 66 (814)
T ss_dssp EEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTEEE-----------------EEEECCSSCEEEEEEEG-G
T ss_pred ceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCceE-----------------EEEecCCCcEEEEEEeC-C
Confidence 455789999999999997 6789999999999999998765321 12347899999999987 7
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCCCCCe
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGI 193 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h~~~v 193 (446)
+++|++++.|++|++||+.+++.+..+. +.+.+.++++++.. .+|++++.|+.|++||++++ .....+.+|...|
T Consensus 67 ~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~---~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v 143 (814)
T 3mkq_A 67 KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK---PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFV 143 (814)
T ss_dssp GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS---SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC---CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcE
Confidence 8899999999999999999998887776 55678888998854 47899999999999999987 6778889999999
Q ss_pred EEEEEec-CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 194 MTVEWST-SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 194 ~sv~~s~-~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
.+++|+| ++. .|++++.||+|++||++++.....+
T Consensus 144 ~~~~~~p~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~------------------------------------------- 179 (814)
T 3mkq_A 144 MCVAFNPKDPS-TFASGCLDRTVKVWSLGQSTPNFTL------------------------------------------- 179 (814)
T ss_dssp EEEEEETTEEE-EEEEEETTSEEEEEETTCSSCSEEE-------------------------------------------
T ss_pred EEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcceeEE-------------------------------------------
Confidence 9999999 554 6899999999999998754321111
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc--CCCEEEEeecCCcEEEEecCcCceeeeeeeE
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE--DGMYLLSAGSDSRIRLWDVESGRNTLVNFET 350 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~--dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~ 350 (446)
...|...+.+++|+| ++.+|++|+.|++|++||+.+++.. ..
T Consensus 180 --------------------------------~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~----~~ 223 (814)
T 3mkq_A 180 --------------------------------TTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCV----AT 223 (814)
T ss_dssp --------------------------------ECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEE----EE
T ss_pred --------------------------------ecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEE----EE
Confidence 012335688999999 9999999999999999999886532 22
Q ss_pred EEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCCE-EEEeeCCCcEEEeCCCCC
Q 013274 351 VRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE-LYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~-lvtgs~D~~v~vW~~~~~ 428 (446)
+..+......++++|++..+++++. +.+++||+.+++....+..|...+++++|+|+++. +++++.|+.+.+|+....
T Consensus 224 ~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (814)
T 3mkq_A 224 LEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGND 303 (814)
T ss_dssp EECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCC
T ss_pred EcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCC
Confidence 2223445567889999988877754 68999999999999999999999999999999874 244555777888876543
No 69
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=6.6e-32 Score=253.64 Aligned_cols=249 Identities=22% Similarity=0.416 Sum_probs=203.7
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
..+|...|.++.++| ++++|++|+.|++|++|++.+++....+. +...+..+++++. ..+|++|+.|+.|++||+
T Consensus 19 ~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 19 LAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD---SNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp ECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT---SSEEEEEETTSEEEEEET
T ss_pred EcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC---CCEEEEECCCCEEEEEEC
Confidence 468999999999987 78899999999999999999888777665 3456788888874 458999999999999999
Q ss_pred CCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 178 ~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
++++.+..+.+|...|.++.|+|+++. |++|+.|++|++||+++++++..+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~s~~~d~~i~iwd~~~~~~~~~~---------------------------- 145 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNL-IVSGSFDESVRIWDVKTGKCLKTL---------------------------- 145 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSE-EEEEETTSCEEEEETTTCCEEEEE----------------------------
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCEEEEEe----------------------------
Confidence 999999999999999999999999875 789999999999999876543222
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEe
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWD 337 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd 337 (446)
..|..+|.+++|+|++.+|++++.|+.|++||
T Consensus 146 ------------------------------------------------~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd 177 (312)
T 4ery_A 146 ------------------------------------------------PAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWD 177 (312)
T ss_dssp ------------------------------------------------CCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ------------------------------------------------cCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Confidence 24667799999999999999999999999999
Q ss_pred cCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEE--EE-cCCCCEEEE
Q 013274 338 VESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCC--CF-SSQDQELYT 413 (446)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~--~f-Spd~~~lvt 413 (446)
+.+++.... + ..........++++|++..+++++ ...+++||+.+++....+.+|...+.++ .| .+++++|++
T Consensus 178 ~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s 254 (312)
T 4ery_A 178 TASGQCLKT-L--IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVS 254 (312)
T ss_dssp TTTCCEEEE-E--CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEE
T ss_pred CCCCceeeE-E--eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEE
Confidence 988653211 1 011122334578899988887765 4689999999999999999998765432 34 478899999
Q ss_pred eeCCCcEEEeCCCCCCCC
Q 013274 414 GGNDRQILVWCPSRHISD 431 (446)
Q Consensus 414 gs~D~~v~vW~~~~~~~~ 431 (446)
|+.|+.|++|++......
T Consensus 255 g~~dg~i~vwd~~~~~~~ 272 (312)
T 4ery_A 255 GSEDNLVYIWNLQTKEIV 272 (312)
T ss_dssp CCTTSCEEEEETTTCCEE
T ss_pred ECCCCEEEEEECCCchhh
Confidence 999999999999866543
No 70
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.7e-32 Score=265.28 Aligned_cols=252 Identities=20% Similarity=0.339 Sum_probs=204.0
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
+.||.+.|+++.|+| ++.+|+|||.|++|++||+.+++.+..+..+ ..+..+++++. ..+|++|+.|+.|++||+
T Consensus 62 l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~---g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPN---GQSVACGGLDSACSIFNL 137 (380)
T ss_dssp ECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTT---SSEEEECCSSSCCEEEEC
T ss_pred ccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCC---CCEEEEeeCCCcEEEEEC
Confidence 468999999999987 7889999999999999999999888777643 44667777774 458999999999999999
Q ss_pred CCCc-------eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeec
Q 013274 178 ASGA-------ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSIS 250 (446)
Q Consensus 178 ~~~~-------~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (446)
.+.. ....+.+|.+.|.++.|+|++...|+||+.|++|++||++++.++..+...
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~------------------ 199 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSE------------------ 199 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCC------------------
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecc------------------
Confidence 7542 345788999999999999986656899999999999999887654433100
Q ss_pred cccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeec
Q 013274 251 KSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGS 329 (446)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~ 329 (446)
...+|...|.+++|++ ++.+|+||+.
T Consensus 200 -----------------------------------------------------~~~~h~~~v~~~~~~~~~~~~l~sgs~ 226 (380)
T 3iz6_a 200 -----------------------------------------------------FPSGHTADVLSLSINSLNANMFISGSC 226 (380)
T ss_dssp -----------------------------------------------------SSSSCCSCEEEEEECSSSCCEEEEEET
T ss_pred -----------------------------------------------------cCCCCccCeEEEEeecCCCCEEEEEEC
Confidence 0135778899999987 8899999999
Q ss_pred CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEeccccc-------ceEE
Q 013274 330 DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYE-------YVNC 401 (446)
Q Consensus 330 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~-------~v~~ 401 (446)
|++|++||+....... ..+..+......++++|++..+++++. ..+++||+.+++.+..+..|.. .|++
T Consensus 227 D~~v~~wd~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 227 DTTVRLWDLRITSRAV---RTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp TSCEEEEETTTTCCCC---EEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred CCeEEEEECCCCCcce---EEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 9999999997532222 122234456678899999998888765 5899999999998888876543 4899
Q ss_pred EEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 402 CCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 402 ~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
++|+|++++|++|+.|+.|+||+....
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTC
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCC
Confidence 999999999999999999999998654
No 71
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-31 Score=256.46 Aligned_cols=246 Identities=21% Similarity=0.308 Sum_probs=200.9
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
+.||...|.++.|+| ++.+|+|||.|++|++||..++.....+..+ ..+..++++|. ..++++|+.|+.+++|++
T Consensus 60 l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~---g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 60 LKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS---GCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT---SSEEEEESTTSEEEEEEC
T ss_pred ecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC---CCEEEEeeCCCCEEEEEE
Confidence 458999999999987 7889999999999999999988877666543 34677888875 458999999999999998
Q ss_pred CCC------ceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 178 ASG------AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 178 ~~~------~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
... .....+.+|.+.|.++.|+|++.. |+|++.|++|++||+++++++..+
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~t~s~D~~v~lwd~~~~~~~~~~---------------------- 192 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQ-ILTASGDGTCALWDVESGQLLQSF---------------------- 192 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSE-EEEEETTSEEEEEETTTCCEEEEE----------------------
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCE-EEEEeCCCcEEEEeCCCCeEEEEE----------------------
Confidence 654 245677899999999999999875 789999999999999876543322
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc--CCCEEEEeec
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE--DGMYLLSAGS 329 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~--dg~~l~sgs~ 329 (446)
.+|...|.+++|+| +|.+|++|+.
T Consensus 193 ------------------------------------------------------~~h~~~v~~~~~~~~~~g~~l~sgs~ 218 (354)
T 2pbi_B 193 ------------------------------------------------------HGHGADVLCLDLAPSETGNTFVSGGC 218 (354)
T ss_dssp ------------------------------------------------------ECCSSCEEEEEECCCSSCCEEEEEET
T ss_pred ------------------------------------------------------cCCCCCeEEEEEEeCCCCCEEEEEeC
Confidence 35677799999987 5789999999
Q ss_pred CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEeccc--ccceEEEEEcC
Q 013274 330 DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGH--YEYVNCCCFSS 406 (446)
Q Consensus 330 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH--~~~v~~~~fSp 406 (446)
|++|++||+.+++.. ..+..+......++++|++..+++++. ..+++||+.+++....+..+ ...+++++|+|
T Consensus 219 Dg~v~~wd~~~~~~~----~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 219 DKKAMVWDMRSGQCV----QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp TSCEEEEETTTCCEE----EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred CCeEEEEECCCCcEE----EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 999999999987542 122223445567889999988888755 68999999888777766644 45789999999
Q ss_pred CCCEEEEeeCCCcEEEeCCCCCC
Q 013274 407 QDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 407 d~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
++++|++|+.|++|+||++....
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGS 317 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCS
T ss_pred CCCEEEEEECCCcEEEEECCCCc
Confidence 99999999999999999986554
No 72
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8e-32 Score=261.77 Aligned_cols=246 Identities=24% Similarity=0.422 Sum_probs=197.4
Q ss_pred CccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCC-------------------ceEEeeeccCCCCce
Q 013274 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG-------------------KVYRTAMSPLAASHM 161 (446)
Q Consensus 101 gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~ 161 (446)
+|...|.++.|+| ++++||+|+ |+++++|++.+++.+..+.... .+.+++++++ ..
T Consensus 62 ~h~~~V~~v~fsp-dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d---g~ 136 (393)
T 1erj_A 62 DHTSVVCCVKFSN-DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD---GK 136 (393)
T ss_dssp ECSSCCCEEEECT-TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTT---SS
T ss_pred CCCCEEEEEEECC-CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCC---CC
Confidence 6999999999987 888999976 7899999999988776654221 2667788774 45
Q ss_pred EEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCc
Q 013274 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPP 241 (446)
Q Consensus 162 ~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~ 241 (446)
+|++|+.|+.|++||+++++.+..+.+|...|.+++|+|+++. |++++.|++|++||++++.+...+
T Consensus 137 ~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~-l~s~s~d~~v~iwd~~~~~~~~~~------------ 203 (393)
T 1erj_A 137 FLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDK-LVSGSGDRTVRIWDLRTGQCSLTL------------ 203 (393)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTTEEEEEE------------
T ss_pred EEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCE-EEEecCCCcEEEEECCCCeeEEEE------------
Confidence 8999999999999999999999999999999999999999885 789999999999999876543222
Q ss_pred ccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-C
Q 013274 242 LLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-D 320 (446)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-d 320 (446)
.|...+.+++|+| +
T Consensus 204 -----------------------------------------------------------------~~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 204 -----------------------------------------------------------------SIEDGVTTVAVSPGD 218 (393)
T ss_dssp -----------------------------------------------------------------ECSSCEEEEEECSTT
T ss_pred -----------------------------------------------------------------EcCCCcEEEEEECCC
Confidence 1234588999999 8
Q ss_pred CCEEEEeecCCcEEEEecCcCceeeeeeeE----EEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecC---------
Q 013274 321 GMYLLSAGSDSRIRLWDVESGRNTLVNFET----VRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG--------- 386 (446)
Q Consensus 321 g~~l~sgs~D~~i~lWd~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~--------- 386 (446)
|.+|++|+.|++|++||+.++.... .+.. ...+......+++++++..+++++. ..+++||+.+.
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~-~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~ 297 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVE-RLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTP 297 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEE-EEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEE-eecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCC
Confidence 9999999999999999998865321 1110 0112334567889999998888754 68999998653
Q ss_pred ---ceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 387 ---KTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 387 ---~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
....++.+|.+.|.+++|+|++++|+|||.|++|++|++.....
T Consensus 298 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 344 (393)
T 1erj_A 298 NSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNP 344 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCE
T ss_pred CCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeE
Confidence 34568899999999999999999999999999999999876543
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.4e-32 Score=266.13 Aligned_cols=290 Identities=17% Similarity=0.213 Sum_probs=223.4
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
...+.++++|....++++++.||.|+|||+....... . ......+|...|.++.|+|.++.+|++|+
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~--------~-----~~~~~~~h~~~V~~~~~~p~~~~~l~s~s 101 (402)
T 2aq5_A 35 WDSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD--------K-----NVPLVCGHTAPVLDIAWCPHNDNVIASGS 101 (402)
T ss_dssp CSSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC--------T-----TCCCBCCCSSCEEEEEECTTCTTEEEEEE
T ss_pred cCCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC--------C-----CCceEecCCCCEEEEEeCCCCCCEEEEEe
Confidence 4456688887544566678999999999985432110 0 01224589999999999986788999999
Q ss_pred CCCeEEEEECCCC-------eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee--eCCCCCe
Q 013274 124 YDHYVKVWDTNCT-------RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL--SGHRDGI 193 (446)
Q Consensus 124 ~D~~i~iWd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l--~~h~~~v 193 (446)
.|++|++||+.++ +++..+. +.+.+..+++++.. ..+|++++.|+.|++||+++++.+..+ .+|.+.|
T Consensus 102 ~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 102 EDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTA--QNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp TTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSB--TTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred CCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCC--CCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence 9999999999887 4455554 45668888998854 248999999999999999999999998 8899999
Q ss_pred EEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCC
Q 013274 194 MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG 273 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (446)
.+++|+|+++. |++++.||.|++||++++.+...+.
T Consensus 180 ~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~~------------------------------------------- 215 (402)
T 2aq5_A 180 YSVDWSRDGAL-ICTSCRDKRVRVIEPRKGTVVAEKD------------------------------------------- 215 (402)
T ss_dssp EEEEECTTSSC-EEEEETTSEEEEEETTTTEEEEEEE-------------------------------------------
T ss_pred EEEEECCCCCE-EEEEecCCcEEEEeCCCCceeeeec-------------------------------------------
Confidence 99999999885 7899999999999998765433321
Q ss_pred CceeecccceeecCCccccccCCCcccccccccccccC-eEEEEEccCCCEEEEe---ecCCcEEEEecCcCceeeeeee
Q 013274 274 NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGA-VTGLKVTEDGMYLLSA---GSDSRIRLWDVESGRNTLVNFE 349 (446)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~fs~dg~~l~sg---s~D~~i~lWd~~~~~~~~~~~~ 349 (446)
.+|.+. +.++.|+|+|.+|++| +.|+.|++||+.+.+......
T Consensus 216 --------------------------------~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~- 262 (402)
T 2aq5_A 216 --------------------------------RPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ- 262 (402)
T ss_dssp --------------------------------CSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE-
T ss_pred --------------------------------cCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE-
Confidence 123333 7889999999999999 799999999998865322111
Q ss_pred EEEeecCCCeEEEEcCCCcEEEE-eC-CCceEEEEeecCce-EEEeccc--ccceEEEEEcCCCCEEEEeeCCCcEEEeC
Q 013274 350 TVRLQTSKPIQLATTQDPAVVFV-PC-MTAVKAFDIWSGKT-CLTFRGH--YEYVNCCCFSSQDQELYTGGNDRQILVWC 424 (446)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~d~~~~~~-~~~l~gH--~~~v~~~~fSpd~~~lvtgs~D~~v~vW~ 424 (446)
. .........+++++++..+++ +. ...+++|++.+++. +..+..| ...|.+++|+||+.++++ .|+.+++|+
T Consensus 263 ~-~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~ 339 (402)
T 2aq5_A 263 E-LDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYK 339 (402)
T ss_dssp E-CCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEE
T ss_pred e-ccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEE
Confidence 1 012345667889999888865 43 56899999998874 5555554 599999999999999875 467999999
Q ss_pred CCCC
Q 013274 425 PSRH 428 (446)
Q Consensus 425 ~~~~ 428 (446)
+...
T Consensus 340 l~~~ 343 (402)
T 2aq5_A 340 LHER 343 (402)
T ss_dssp EETT
T ss_pred cCCC
Confidence 8754
No 74
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-31 Score=253.11 Aligned_cols=246 Identities=16% Similarity=0.186 Sum_probs=185.1
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC--eeeEEEe---cCCceEEeeeccCCCCceEEEEeeCCCcEE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT--RVVMNFK---MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~lasgs~d~~v~ 173 (446)
..+|+..|.++.+++ + +|+||+.|++|++||+..+ ..+..+. +.+.+.+++++|. ..+|++|+.|+.|+
T Consensus 10 ~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~---~~~las~s~D~~v~ 83 (330)
T 2hes_X 10 LKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH---TSLLAAGSFDSTVS 83 (330)
T ss_dssp EECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT---SSEEEEEETTSCEE
T ss_pred eccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC---CCEEEEEeCCCcEE
Confidence 358999999998876 3 9999999999999999875 3444442 4456888999885 35899999999999
Q ss_pred EEeCCC-------CceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCccccc
Q 013274 174 LCDIAS-------GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKR 245 (446)
Q Consensus 174 vwd~~~-------~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~ 245 (446)
+||++. ..+...+.+|.+.|.+++|+|++++ |+||+.|++|++||++... ....
T Consensus 84 iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~-las~s~D~~v~iwd~~~~~~~~~~----------------- 145 (330)
T 2hes_X 84 IWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY-LATCSRDKSVWIWETDESGEEYEC----------------- 145 (330)
T ss_dssp EEEC-------CCCEEEEEEC----CEEEEEECTTSCE-EEEEETTSCEEEEECCTTCCCCEE-----------------
T ss_pred EEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE-EEEEeCCCEEEEEeccCCCCCeEE-----------------
Confidence 999953 3456778999999999999999885 7999999999999985321 0000
Q ss_pred ceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEE
Q 013274 246 KVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL 325 (446)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~ 325 (446)
.....+|...|.+++|+|++.+|+
T Consensus 146 --------------------------------------------------------~~~~~~h~~~v~~v~~~p~~~~l~ 169 (330)
T 2hes_X 146 --------------------------------------------------------ISVLQEHSQDVKHVIWHPSEALLA 169 (330)
T ss_dssp --------------------------------------------------------EEEECCCSSCEEEEEECSSSSEEE
T ss_pred --------------------------------------------------------EEEeccCCCceEEEEECCCCCEEE
Confidence 001236788899999999999999
Q ss_pred EeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCC--CcEEEEeC-CCceEEEEeecC--------ceEEEecc
Q 013274 326 SAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD--PAVVFVPC-MTAVKAFDIWSG--------KTCLTFRG 394 (446)
Q Consensus 326 sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~d~~~~--------~~~~~l~g 394 (446)
||+.|++|++||+.++.... +..+..+......+.+.++ +..+++++ +..+++|++.++ .....+.+
T Consensus 170 s~s~D~~i~iW~~~~~~~~~--~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~ 247 (330)
T 2hes_X 170 SSSYDDTVRIWKDYDDDWEC--VAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPD 247 (330)
T ss_dssp EEETTSCEEEEEEETTEEEE--EEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCS
T ss_pred EEcCCCeEEEEECCCCCeeE--EEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeeccc
Confidence 99999999999987653211 1222233445566788887 55666654 468999999765 34456666
Q ss_pred -cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 395 -HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 395 -H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
|...|++++|+|++ +|++|+.|++|+||+...
T Consensus 248 ~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 248 VHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp CCSSCEEEEEECTTS-CEEEEETTSCEEEEEEET
T ss_pred ccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCC
Confidence 99999999999765 899999999999998754
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=5.5e-32 Score=266.66 Aligned_cols=303 Identities=12% Similarity=0.260 Sum_probs=213.0
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCcc------------ccEeE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHK------------YAISS 108 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~------------~~V~~ 108 (446)
.|.+.|++|+|+| ++++||+|+.||.|+|||+.++....... ....+. .....+|. ..|.+
T Consensus 26 ~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~-~~~~~~-----~~~~~~h~~~~~~~~~~~~~~~V~~ 98 (447)
T 3dw8_B 26 AEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHS-RGEYNV-----YSTFQSHEPEFDYLKSLEIEEKINK 98 (447)
T ss_dssp CGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCC-CCCEEE-----EEEEECCCCEEEGGGTEEECCCCCE
T ss_pred cccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCccc-ccceeE-----ecccccccccccccccccccCceEE
Confidence 5789999999997 68899999999999999998654210000 000000 11234787 78999
Q ss_pred EEEeecCC-cEEEEEeCCCeEEEEECCCCeee---------------------------------------EEE--ecCC
Q 013274 109 AIWYPVDT-GLFVTGSYDHYVKVWDTNCTRVV---------------------------------------MNF--KMPG 146 (446)
Q Consensus 109 ~~~~~~~~-~~l~s~s~D~~i~iWd~~~~~~~---------------------------------------~~~--~~~~ 146 (446)
+.|+|... .+|++++.|++|++||+.++... ..+ .+..
T Consensus 99 l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 178 (447)
T 3dw8_B 99 IRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY 178 (447)
T ss_dssp EEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS
T ss_pred EEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc
Confidence 99998432 69999999999999998764331 111 2345
Q ss_pred ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceee-------eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEE
Q 013274 147 KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQ-------TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFW 218 (446)
Q Consensus 147 ~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~-------~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iW 218 (446)
.+.++++++. ..+|++| .|+.|++||++++ .... .+.+|...|.+++|+|++..+|++|+.||+|++|
T Consensus 179 ~v~~~~~~~~---~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 254 (447)
T 3dw8_B 179 HINSISINSD---YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLC 254 (447)
T ss_dssp CCCEEEECTT---SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEE
T ss_pred ceEEEEEcCC---CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEE
Confidence 5778888874 4578888 7999999999844 3433 3678999999999999983368999999999999
Q ss_pred EccCCce----eEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCcccccc
Q 013274 219 DIRRAGC----FRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRL 294 (446)
Q Consensus 219 d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (446)
|++++.. ...+......
T Consensus 255 d~~~~~~~~~~~~~~~~~~~~----------------------------------------------------------- 275 (447)
T 3dw8_B 255 DMRASALCDRHSKLFEEPEDP----------------------------------------------------------- 275 (447)
T ss_dssp ETTTCSSSCTTCEEECCC--------------------------------------------------------------
T ss_pred ECcCCccccceeeEeccCCCc-----------------------------------------------------------
Confidence 9987643 1221100000
Q ss_pred CCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCc-CceeeeeeeEEEeecC--C-------------C
Q 013274 295 HPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES-GRNTLVNFETVRLQTS--K-------------P 358 (446)
Q Consensus 295 ~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~-~~~~~~~~~~~~~~~~--~-------------~ 358 (446)
.......+|.+.|.+++|+|+|.+|++++. ++|++||+.+ ++. ...+. .+.. . .
T Consensus 276 -----~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~-~~~~~---~~~~~~~~l~~~~~~~~i~~~ 345 (447)
T 3dw8_B 276 -----SNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRP-VETYQ---VHEYLRSKLCSLYENDCIFDK 345 (447)
T ss_dssp -------CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSC-SCCEE---SCGGGTTTHHHHHHTSGGGCC
T ss_pred -----cccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccc-cceee---ccccccccccccccccccccc
Confidence 000012356778999999999999999998 9999999986 432 21121 1111 0 1
Q ss_pred eEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecc---------------------------------cccceEEEEE
Q 013274 359 IQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRG---------------------------------HYEYVNCCCF 404 (446)
Q Consensus 359 ~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~g---------------------------------H~~~v~~~~f 404 (446)
..++++|++..+++++. ..+++||+.+++.+ .+.+ +...|.+++|
T Consensus 346 ~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 424 (447)
T 3dw8_B 346 FECCWNGSDSVVMTGSYNNFFRMFDRNTKRDI-TLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAW 424 (447)
T ss_dssp CCEEECTTSSEEEEECSTTEEEEEETTTCCEE-EEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEE
T ss_pred eEEEECCCCCEEEEeccCCEEEEEEcCCCcce-eeeecccccccccccCCccccccCCcccccccccccccCCceeEEEE
Confidence 23789999988887765 57999999888764 3332 3457899999
Q ss_pred cCCCCEEEEeeCCCcEEEeCC
Q 013274 405 SSQDQELYTGGNDRQILVWCP 425 (446)
Q Consensus 405 Spd~~~lvtgs~D~~v~vW~~ 425 (446)
+|++.+||+++.|+ +.+|..
T Consensus 425 ~p~~~~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 425 HPKENIIAVATTNN-LYIFQD 444 (447)
T ss_dssp CSSSSEEEEECSSC-EEEEEC
T ss_pred CCCCCEEEEEecce-eeeecc
Confidence 99999999998876 777743
No 76
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.9e-31 Score=251.62 Aligned_cols=244 Identities=19% Similarity=0.303 Sum_probs=197.2
Q ss_pred cccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC-----eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCc
Q 013274 98 HEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT-----RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQ 171 (446)
Q Consensus 98 ~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-----~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~ 171 (446)
.+.||.+.|.++.++|.++.+|+|||.|++|++||+... .++..+. +...+..+++++. ..+|++|+.|+.
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d---g~~l~s~s~D~~ 88 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD---GAYALSASWDKT 88 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT---SSEEEEEETTSE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC---CCEEEEEeCCCE
Confidence 457999999999999866789999999999999998632 2344444 3455777888774 458999999999
Q ss_pred EEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 172 v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|++||+++++.+..+.+|.+.|.+++|+|+++. |+||+.|++|++||++.. ++..
T Consensus 89 v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~s~s~D~~i~vwd~~~~-~~~~----------------------- 143 (319)
T 3frx_A 89 LRLWDVATGETYQRFVGHKSDVMSVDIDKKASM-IISGSRDKTIKVWTIKGQ-CLAT----------------------- 143 (319)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSCE-EEEEETTSCEEEEETTSC-EEEE-----------------------
T ss_pred EEEEECCCCCeeEEEccCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCCC-eEEE-----------------------
Confidence 999999999999999999999999999999875 799999999999998632 2111
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC------CCEEE
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED------GMYLL 325 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d------g~~l~ 325 (446)
..+|...|.++.|+|. +.+|+
T Consensus 144 -----------------------------------------------------~~~h~~~v~~~~~~~~~~~~~~~~~l~ 170 (319)
T 3frx_A 144 -----------------------------------------------------LLGHNDWVSQVRVVPNEKADDDSVTII 170 (319)
T ss_dssp -----------------------------------------------------ECCCSSCEEEEEECCC------CCEEE
T ss_pred -----------------------------------------------------EeccCCcEEEEEEccCCCCCCCccEEE
Confidence 1356777899999884 55899
Q ss_pred EeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEE
Q 013274 326 SAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCF 404 (446)
Q Consensus 326 sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~f 404 (446)
+++.|++|++||+.+.+.. ..+..+......++++|++.++++++. ..+++||+.+++.+.++..| ..|.+++|
T Consensus 171 s~~~d~~i~~wd~~~~~~~----~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 245 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQFQIE----ADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF 245 (319)
T ss_dssp EEETTSCEEEEETTTTEEE----EEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE
T ss_pred EEeCCCEEEEEECCcchhh----eeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE
Confidence 9999999999999876432 112223445667889999998888755 68999999999998888865 57999999
Q ss_pred cCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 405 SSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 405 Spd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
+||+.+|++++.+ .+++|+++..
T Consensus 246 sp~~~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 246 SPNRYWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp CSSSSEEEEEETT-EEEEEEETTE
T ss_pred cCCCCEEEEEcCC-CcEEEEeCcC
Confidence 9999999988755 5999988754
No 77
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.6e-31 Score=262.83 Aligned_cols=275 Identities=20% Similarity=0.316 Sum_probs=207.8
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
..+|.+.|++|+|+|.++.+|++++.||+|++||+.+....... ......+ ....+|...|+++.|+|....+
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~--~~~~~~~-----~~~~~h~~~v~~l~~~~~~~~~ 196 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEP--SGECQPD-----LRLRGHQKEGYGLSWNPNLNGY 196 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCT--TCCCCCS-----EEEECCSSCCCCEEECTTSTTE
T ss_pred EEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCc--cccCCCc-----EEecCCCCCeEEEEeCCCCCCe
Confidence 35799999999999865789999999999999999753211000 0000111 1235899999999999854449
Q ss_pred EEEEeCCCeEEEEECCCCee-------eEEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC---ceeeeee
Q 013274 119 FVTGSYDHYVKVWDTNCTRV-------VMNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG---AISQTLS 187 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~-------~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~---~~~~~l~ 187 (446)
|++|+.|++|++||+..+.. ...+ .+.+.+.++++++.. ..+|++++.|+.|++||++++ .....+.
T Consensus 197 l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~ 274 (430)
T 2xyi_A 197 LLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH--ESLFGSVADDQKLMIWDTRNNNTSKPSHTVD 274 (430)
T ss_dssp EEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCSCSSSCSEEEE
T ss_pred EEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC--CCEEEEEeCCCeEEEEECCCCCCCcceeEee
Confidence 99999999999999987322 2223 244568888888743 358999999999999999987 5677888
Q ss_pred CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCc
Q 013274 188 GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAP 266 (446)
Q Consensus 188 ~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (446)
.|...|.+++|+|+++++|++|+.||+|++||+++.. .+.
T Consensus 275 ~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~--------------------------------------- 315 (430)
T 2xyi_A 275 AHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH--------------------------------------- 315 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE---------------------------------------
T ss_pred cCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE---------------------------------------
Confidence 9999999999999998778999999999999998531 100
Q ss_pred cccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecCCcEEEEecCcCceee
Q 013274 267 QKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSDSRIRLWDVESGRNTL 345 (446)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~~i~lWd~~~~~~~~ 345 (446)
...+|.+.|++++|+|++. +|++++.|++|++||+.......
T Consensus 316 -------------------------------------~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~ 358 (430)
T 2xyi_A 316 -------------------------------------SFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ 358 (430)
T ss_dssp -------------------------------------EEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC
T ss_pred -------------------------------------EeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc
Confidence 1235777899999999995 69999999999999998632110
Q ss_pred eeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCC-EEEEeeCCCcEEEeC
Q 013274 346 VNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ-ELYTGGNDRQILVWC 424 (446)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~ 424 (446)
.. .. . . + ...+++..+.+|.+.|++++|+|+++ +|++++.|+.|+||+
T Consensus 359 ~~-~~--~-~----------~-----------------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 359 ST-ED--A-E----------D-----------------GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp CH-HH--H-H----------H-----------------CCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred Cc-cc--c-c----------c-----------------CCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 00 00 0 0 0 01234556788999999999999999 899999999999999
Q ss_pred CCCCC
Q 013274 425 PSRHI 429 (446)
Q Consensus 425 ~~~~~ 429 (446)
+....
T Consensus 408 ~~~~~ 412 (430)
T 2xyi_A 408 MAENV 412 (430)
T ss_dssp ECHHH
T ss_pred ccccc
Confidence 87543
No 78
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-30 Score=247.16 Aligned_cols=247 Identities=18% Similarity=0.241 Sum_probs=190.0
Q ss_pred cccCccccEeEEEE-----eecCCcEEEEEeCCCeEEEEECCCCe-------eeEEEe-cCCceEEeeeccCCCCceEEE
Q 013274 98 HEHGHKYAISSAIW-----YPVDTGLFVTGSYDHYVKVWDTNCTR-------VVMNFK-MPGKVYRTAMSPLAASHMLIA 164 (446)
Q Consensus 98 ~~~gh~~~V~~~~~-----~~~~~~~l~s~s~D~~i~iWd~~~~~-------~~~~~~-~~~~~~~~~~~~~~~~~~~la 164 (446)
.+.||...|+++.+ ++.++.+|+|||.|++|++||+.... +...+. +.+.+.++++++. ..+++
T Consensus 16 ~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~---~~~l~ 92 (343)
T 2xzm_R 16 ILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE---NCFAI 92 (343)
T ss_dssp EEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS---TTEEE
T ss_pred eeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC---CCEEE
Confidence 34689999999998 55588999999999999999987532 333333 3455788888774 45899
Q ss_pred EeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccc
Q 013274 165 AGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLK 244 (446)
Q Consensus 165 sgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (446)
+|+.|+.|++||+++++.+..+.+|.+.|.+++|+|+++. |++++.|++|++||++... ....
T Consensus 93 s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~-l~s~~~d~~i~~wd~~~~~-~~~~--------------- 155 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQ-ILSAGAEREIKLWNILGEC-KFSS--------------- 155 (343)
T ss_dssp EEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTE-EEEEETTSCEEEEESSSCE-EEEC---------------
T ss_pred EEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCE-EEEEcCCCEEEEEeccCCc-eeee---------------
Confidence 9999999999999999999999999999999999999985 7899999999999986321 1000
Q ss_pred cceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC---
Q 013274 245 RKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG--- 321 (446)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg--- 321 (446)
....+|...|.+++|+|++
T Consensus 156 ----------------------------------------------------------~~~~~~~~~v~~~~~~~~~~~~ 177 (343)
T 2xzm_R 156 ----------------------------------------------------------AEKENHSDWVSCVRYSPIMKSA 177 (343)
T ss_dssp ----------------------------------------------------------CTTTSCSSCEEEEEECCCCCSC
T ss_pred ----------------------------------------------------------ecccCCCceeeeeeeccccccc
Confidence 0012466779999999987
Q ss_pred -------CEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecC-ceEEEe
Q 013274 322 -------MYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSG-KTCLTF 392 (446)
Q Consensus 322 -------~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~-~~~~~l 392 (446)
.+|++++.|++|++||... +. ...+..+......++++|++.++++++. ..+++||+.+. .....+
T Consensus 178 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~----~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 178 NKVQPFAPYFASVGWDGRLKVWNTNF-QI----RYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp SCCCSSCCEEEEEETTSEEEEEETTT-EE----EEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred cccCCCCCEEEEEcCCCEEEEEcCCC-ce----eEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceee
Confidence 7999999999999999542 11 1122333455667899999998888764 57999999443 333444
Q ss_pred cccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 393 RGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 393 ~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.|...|++++|+|++++|+ ++.|+.|++|++.+..
T Consensus 253 -~~~~~v~~v~~sp~~~~la-~~~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 253 -DAGSTINQIAFNPKLQWVA-VGTDQGVKIFNLMTQS 287 (343)
T ss_dssp -ECSSCEEEEEECSSSCEEE-EEESSCEEEEESSSCC
T ss_pred -cCCCcEEEEEECCCCCEEE-EECCCCEEEEEeCCCC
Confidence 3556799999999998876 4568899999987554
No 79
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.6e-30 Score=266.39 Aligned_cols=294 Identities=17% Similarity=0.244 Sum_probs=223.1
Q ss_pred eeEeCCCccc-eeEEEeecC-CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 36 KEIVSPHKGS-INSLQVDLT-EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 36 ~~~~~~H~~~-v~~l~~s~~-~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
...+.+|.+. |++++|+|. ++++|++|+.||+|+|||+.++.... .+ .... .....+|...|.++.++|
T Consensus 56 ~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~---~~-~~~~-----~~~~~~~~~~v~~~~~s~ 126 (615)
T 1pgu_A 56 VVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN---SV-EVNV-----KSEFQVLAGPISDISWDF 126 (615)
T ss_dssp EEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT---EE-EEEE-----EEEEECCSSCEEEEEECT
T ss_pred ceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc---cc-cccc-----cchhhcccccEEEEEEeC
Confidence 4457899999 999999961 57899999999999999996541100 00 0000 112347888999999987
Q ss_pred cCCcEEEEEeCC----CeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 114 VDTGLFVTGSYD----HYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 114 ~~~~~l~s~s~D----~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
++++|++++.| +.|++|| .++.+..+. +.+.+..+.+++... .++++++.|+.|++||+++++....+.+
T Consensus 127 -~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~d~~v~vwd~~~~~~~~~~~~ 201 (615)
T 1pgu_A 127 -EGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRP--MRSMTVGDDGSVVFYQGPPFKFSASDRT 201 (615)
T ss_dssp -TSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSS--CEEEEEETTTEEEEEETTTBEEEEEECS
T ss_pred -CCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCC--cEEEEEeCCCcEEEEeCCCcceeeeecc
Confidence 78899999988 7899998 345555444 345678888887532 3799999999999999999999999999
Q ss_pred CCC---CeEEEEEecC-CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 189 HRD---GIMTVEWSTS-SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 189 h~~---~v~sv~~s~~-~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
|.. .|.+++|+|+ +++ |++++.||.|++||+++++.+..+..
T Consensus 202 ~~~~~~~v~~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~--------------------------------- 247 (615)
T 1pgu_A 202 HHKQGSFVRDVEFSPDSGEF-VITVGSDRKISCFDGKSGEFLKYIED--------------------------------- 247 (615)
T ss_dssp SSCTTCCEEEEEECSTTCCE-EEEEETTCCEEEEETTTCCEEEECCB---------------------------------
T ss_pred cCCCCceEEEEEECCCCCCE-EEEEeCCCeEEEEECCCCCEeEEecc---------------------------------
Confidence 999 9999999999 774 78999999999999987654322200
Q ss_pred CccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCcee
Q 013274 265 APQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT 344 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~ 344 (446)
...+|.+.|.+++|+ ++.+|++++.|+.|++||+.+++..
T Consensus 248 ---------------------------------------~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~ 287 (615)
T 1pgu_A 248 ---------------------------------------DQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCV 287 (615)
T ss_dssp ---------------------------------------TTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEE
T ss_pred ---------------------------------------cccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEE
Confidence 001467789999999 9999999999999999999986532
Q ss_pred eeeeeEEEee----cCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCc
Q 013274 345 LVNFETVRLQ----TSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 419 (446)
Q Consensus 345 ~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~ 419 (446)
. ..... ......+.+. ++..++++ ....+++||+.+++.+..+.+|.+.|++++| |+ |++++.|+.
T Consensus 288 ~----~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~---l~~~~~dg~ 358 (615)
T 1pgu_A 288 Q----KWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NP---LISGSYDGR 358 (615)
T ss_dssp E----EEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TT---TEEEETTSC
T ss_pred E----EEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cC---cEEECCCCe
Confidence 1 11111 1222334443 55555554 5578999999999999999999999999999 88 888888888
Q ss_pred EEEeCCC
Q 013274 420 ILVWCPS 426 (446)
Q Consensus 420 v~vW~~~ 426 (446)
|++|++.
T Consensus 359 i~~w~~~ 365 (615)
T 1pgu_A 359 IMEWSSS 365 (615)
T ss_dssp EEETTTT
T ss_pred EEEEEch
Confidence 8888865
No 80
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-31 Score=262.68 Aligned_cols=268 Identities=15% Similarity=0.128 Sum_probs=205.2
Q ss_pred CccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
-...|.+|+|+| ||+++||||.|++|+ |.+.+.. ..||...|.++.++| ++
T Consensus 14 ~~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~~~~--------------------l~gh~~~v~~V~FsP-dg----- 64 (588)
T 2j04_A 14 FEDWKNNLTWAR-DGTLYLTTFPDISIG--QPKYAKD--------------------INCNSKNLFHVKEFP-LE----- 64 (588)
T ss_dssp CSSSSCCEEECT-TSCEEEECSSSEEEE--EECCCSC--------------------CSSBGGGTEEEEEEC-CC-----
T ss_pred hhccEEEEEECC-CCCEEEEEcCCceee--cccccce--------------------ecCCCccEEEEEECC-CC-----
Confidence 357899999997 789999999999999 7554321 148999999999998 55
Q ss_pred EeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCC-----CeEEE
Q 013274 122 GSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD-----GIMTV 196 (446)
Q Consensus 122 ~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~-----~v~sv 196 (446)
.|+++++|+..... ..++.....+..++++|++ .+||+++.|+.|++||.++ ++..+. |.. .|.++
T Consensus 65 --~~~~~~~~~~~~~~-~~~~~~~~~V~~vawSPdG---~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~sv 135 (588)
T 2j04_A 65 --FENKLDFELAQQNG-LLNSQPVCYPRVCKPSPID---DWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCF 135 (588)
T ss_dssp --CCCTTTTSCCCSSC-SSTTSCSCCEEEEEECSSS---SCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEE
T ss_pred --CcceEEEEeCCCce-EeecCCCCcEEEEEECCCC---CEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEE
Confidence 56777777654322 2233335678899999854 5899999999999999654 666666 665 49999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCce-------eEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccc
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGC-------FRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKR 269 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (446)
+|||+++. |++|+.||+|+|||+.++.. +..+.
T Consensus 136 afSPDG~~-LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~--------------------------------------- 175 (588)
T 2j04_A 136 EWNPIESS-IVVGNEDGELQFFSIRKNSENTPEFYFESSIR--------------------------------------- 175 (588)
T ss_dssp EECSSSSC-EEEEETTSEEEEEECCCCTTTCCCCEEEEEEE---------------------------------------
T ss_pred EEcCCCCE-EEEEcCCCEEEEEECCCCccccccceeeeeee---------------------------------------
Confidence 99999986 79999999999999876421 01000
Q ss_pred ccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeee
Q 013274 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE 349 (446)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~ 349 (446)
....+|.++|.+++|+||| +++++.|++|++||+.++.... ...
T Consensus 176 ---------------------------------~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~-~~~ 219 (588)
T 2j04_A 176 ---------------------------------LSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQP-VSR 219 (588)
T ss_dssp ---------------------------------CSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCC-CEE
T ss_pred ---------------------------------cccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccc-cee
Confidence 0013678899999999999 8889999999999998765210 011
Q ss_pred EEE-eecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEE--cCCCCEEEEeeCCCcEEEeCCC
Q 013274 350 TVR-LQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCF--SSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 350 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~f--Spd~~~lvtgs~D~~v~vW~~~ 426 (446)
.+. .+...+..++++ +..+++++...+++||+.+++......||.+.|++++| |||++.|++++.||+ |||..+
T Consensus 220 tL~~~h~~~V~svaFs--g~~LASa~~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 220 MIQNASRRKITDLKIV--DYKVVLTCPGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp EEECCCSSCCCCEEEE--TTEEEEECSSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred eecccccCcEEEEEEE--CCEEEEEeCCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 121 233456667777 47888888889999999888775555489999999999 999999999999999 999875
No 81
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-31 Score=279.66 Aligned_cols=261 Identities=19% Similarity=0.317 Sum_probs=201.2
Q ss_pred eEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec-C
Q 013274 37 EIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV-D 115 (446)
Q Consensus 37 ~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~-~ 115 (446)
.++.+|.+.|++++|+| ++++|++|+.||+|+|||+.++.. .. .....+|...|.++.|++. +
T Consensus 3 ~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~----------~~-----~~~l~~h~~~V~~l~~s~~~~ 66 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH----------KL-----IDTLTGHEGPVWRVDWAHPKF 66 (753)
T ss_dssp -----CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEE----------EE-----EEEECCCSSCEEEEEECCTTS
T ss_pred eecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCC----------cc-----ceeccCCcCceEEEEecCCCC
Confidence 35689999999999997 578899999999999999874321 00 1223589999999999763 2
Q ss_pred CcEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc--eeeeeeCCC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA--ISQTLSGHR 190 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~--~~~~l~~h~ 190 (446)
+.+|++|+.|++|++||+.+++ .+..+. +.+.+.++.+++... ..++++|+.|+.|++||++++. ....+.+|.
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~-~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~ 145 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEY-GPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 145 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGG-CSEEEEEETTSEEEEEECCSSSCCCCEEEECCS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCC-CCEEEEEeCCCcEEEEEeecCCCcceeEeecCC
Confidence 8899999999999999999886 333333 456688888887521 4589999999999999998873 455678999
Q ss_pred CCeEEEEEecC-------------CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCC
Q 013274 191 DGIMTVEWSTS-------------SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQ 257 (446)
Q Consensus 191 ~~v~sv~~s~~-------------~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (446)
..|.++.|+|. ++ .+++|+.||+|++||++++.....+
T Consensus 146 ~~v~~l~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~---------------------------- 196 (753)
T 3jro_A 146 IGVNSASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVL---------------------------- 196 (753)
T ss_dssp SCEEEEEECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEE----------------------------
T ss_pred CceEEEEecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCccccee----------------------------
Confidence 99999999994 55 4789999999999999764211000
Q ss_pred CCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC---CCEEEEeecCCcEE
Q 013274 258 NSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED---GMYLLSAGSDSRIR 334 (446)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d---g~~l~sgs~D~~i~ 334 (446)
.....+|.++|++++|+|+ |.+|++|+.|++|+
T Consensus 197 --------------------------------------------~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~ 232 (753)
T 3jro_A 197 --------------------------------------------ESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCI 232 (753)
T ss_dssp --------------------------------------------EEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEE
T ss_pred --------------------------------------------eeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEE
Confidence 0012467888999999999 89999999999999
Q ss_pred EEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEe
Q 013274 335 LWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 335 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtg 414 (446)
+||+.++..... .......+|...|++++|+||+++|++|
T Consensus 233 iwd~~~~~~~~~----------------------------------------~~~~~~~~~~~~v~~l~~spdg~~l~s~ 272 (753)
T 3jro_A 233 IWTQDNEQGPWK----------------------------------------KTLLKEEKFPDVLWRASWSLSGNVLALS 272 (753)
T ss_dssp EEEESSSSSCCB----------------------------------------CCBSSSSCCSSCCCCEEECTTTCCEEEE
T ss_pred EecCCCCCCcce----------------------------------------eEEeccCCCCCceEEEEEcCCCCEEEEE
Confidence 999987532100 0011224588899999999999999999
Q ss_pred eCCCcEEEeCCCC
Q 013274 415 GNDRQILVWCPSR 427 (446)
Q Consensus 415 s~D~~v~vW~~~~ 427 (446)
+.|+.|+||++..
T Consensus 273 s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 273 GGDNKVTLWKENL 285 (753)
T ss_dssp CSSSCEECCBCCS
T ss_pred cCCCEEEEEecCC
Confidence 9999999999874
No 82
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.98 E-value=9.2e-30 Score=269.76 Aligned_cols=286 Identities=15% Similarity=0.245 Sum_probs=220.1
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|++++|+| ++++|++|+.||+|++||++++... ....+|...|.++.|+| ++.
T Consensus 50 ~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~vw~~~~~~~~-----------------~~~~~~~~~v~~~~~s~-~~~ 110 (814)
T 3mkq_A 50 SIQVTETPVRAGKFIA-RKNWIIVGSDDFRIRVFNYNTGEKV-----------------VDFEAHPDYIRSIAVHP-TKP 110 (814)
T ss_dssp EEECCSSCEEEEEEEG-GGTEEEEEETTSEEEEEETTTCCEE-----------------EEEECCSSCEEEEEECS-SSS
T ss_pred EEecCCCcEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcEE-----------------EEEecCCCCEEEEEEeC-CCC
Confidence 4568999999999997 5789999999999999999865421 12247899999999987 788
Q ss_pred EEEEEeCCCeEEEEECCCC-eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCC-CCeE
Q 013274 118 LFVTGSYDHYVKVWDTNCT-RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR-DGIM 194 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~-~~v~ 194 (446)
+|++++.|++|++||+.++ .....+. +.+.+.+++++|. +..++++++.|+.|++||+.++.....+..|. ..+.
T Consensus 111 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~--~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~ 188 (814)
T 3mkq_A 111 YVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPK--DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVN 188 (814)
T ss_dssp EEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETT--EEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCC
T ss_pred EEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEE
Confidence 9999999999999999876 5555444 4456788888873 34589999999999999999988877777654 8999
Q ss_pred EEEEec--CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 195 TVEWST--SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 195 sv~~s~--~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
+++|+| +++. +++++.||.|++||++++.+...+
T Consensus 189 ~~~~~~~~~~~~-l~~~~~dg~i~~~d~~~~~~~~~~------------------------------------------- 224 (814)
T 3mkq_A 189 YVDYYPLPDKPY-MITASDDLTIKIWDYQTKSCVATL------------------------------------------- 224 (814)
T ss_dssp EEEECCSTTCCE-EEEECTTSEEEEEETTTTEEEEEE-------------------------------------------
T ss_pred EEEEEECCCCCE-EEEEeCCCEEEEEECCCCcEEEEE-------------------------------------------
Confidence 999999 7774 789999999999999876543222
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 352 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~ 352 (446)
.+|.+.|++++|+|+|.+|++++.|++|++||+.+++... ...
T Consensus 225 ---------------------------------~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~----~~~ 267 (814)
T 3mkq_A 225 ---------------------------------EGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEK----TLN 267 (814)
T ss_dssp ---------------------------------ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEE----EEC
T ss_pred ---------------------------------cCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE----Eee
Confidence 2466779999999999999999999999999998865321 222
Q ss_pred eecCCCeEEEEcCCCc--EEEEeCCCceEEEEeecCce------------------------------------------
Q 013274 353 LQTSKPIQLATTQDPA--VVFVPCMTAVKAFDIWSGKT------------------------------------------ 388 (446)
Q Consensus 353 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~~~~~~------------------------------------------ 388 (446)
........++++|++. +++.+..+.+.+|++.....
T Consensus 268 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (814)
T 3mkq_A 268 VGLERSWCIATHPTGRKNYIASGFDNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSL 347 (814)
T ss_dssp CSSSSEEEEEECTTCGGGEEEEEETTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCC
T ss_pred cCCCcEEEEEEccCCCceEEEEEeCCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCcccee
Confidence 2233455667777765 45556666677776543211
Q ss_pred -EEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 389 -CLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 389 -~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
...+..|...+.+++|||||++|++++ |+.+.+|+..
T Consensus 348 ~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~ 385 (814)
T 3mkq_A 348 QTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTAL 385 (814)
T ss_dssp CCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETT
T ss_pred eeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECc
Confidence 122344566788899999999888888 8888888865
No 83
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=2.9e-30 Score=250.72 Aligned_cols=261 Identities=10% Similarity=0.056 Sum_probs=174.2
Q ss_pred EEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe------cCCceEEeeeccC-----CCCceEEEEeeCCCcEEEEe
Q 013274 108 SAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK------MPGKVYRTAMSPL-----AASHMLIAAGTEDVQVRLCD 176 (446)
Q Consensus 108 ~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~------~~~~~~~~~~~~~-----~~~~~~lasgs~d~~v~vwd 176 (446)
.+.+++.++.++++++.|++|+|||+.++....... +.+.+.+++|+|. ..+..+||+|+.|++|+|||
T Consensus 93 ~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd 172 (393)
T 4gq1_A 93 NVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWR 172 (393)
T ss_dssp ----CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEE
T ss_pred ceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEE
Confidence 344555577899999999999999998887654322 3456888999873 22567999999999999999
Q ss_pred CCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccC
Q 013274 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG 256 (446)
Q Consensus 177 ~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (446)
++++..+..+.+|...|.+|+|+|++..+|++++.|++|++||++++..............
T Consensus 173 ~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~------------------- 233 (393)
T 4gq1_A 173 LTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKN------------------- 233 (393)
T ss_dssp EETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSC-------------------
T ss_pred CCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCccc-------------------
Confidence 9999888888899999999999999876789999999999999987654322211000000
Q ss_pred CCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEc-cCCCEEEEeecCCcEEE
Q 013274 257 QNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVT-EDGMYLLSAGSDSRIRL 335 (446)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs-~dg~~l~sgs~D~~i~l 335 (446)
......... .........+|...+.++.|+ +||+.|++++.|+++++
T Consensus 234 ----------------~~~~s~~~~----------------~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~v 281 (393)
T 4gq1_A 234 ----------------PWLLTLNTL----------------PLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLR 281 (393)
T ss_dssp ----------------CCSEEEESG----------------GGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEE
T ss_pred ----------------ceEEecccc----------------cceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEE
Confidence 000000000 000001124677889999987 89999999999999999
Q ss_pred EecCcCceeeeeeeEE--------------Eee-cCCCeEEEEcC--CCcEEEEeC-CCceEEEEeecCceEEEeccccc
Q 013274 336 WDVESGRNTLVNFETV--------------RLQ-TSKPIQLATTQ--DPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYE 397 (446)
Q Consensus 336 Wd~~~~~~~~~~~~~~--------------~~~-~~~~~~~~~~~--~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~ 397 (446)
||+.+++.... +... ... ........+.+ +..++++++ ...+++||+.+++....+.+|..
T Consensus 282 wd~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~ 360 (393)
T 4gq1_A 282 WNLFANNDYNE-ISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM 360 (393)
T ss_dssp EEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS
T ss_pred EECccCCCCce-EeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC
Confidence 99987542111 0000 000 01111223333 233444444 35899999999999999999999
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcE
Q 013274 398 YVNCCCFSSQDQELYTGGNDRQI 420 (446)
Q Consensus 398 ~v~~~~fSpd~~~lvtgs~D~~v 420 (446)
.|++|+|||||++||+++.|+.+
T Consensus 361 ~V~svafspdG~~LA~as~~Gv~ 383 (393)
T 4gq1_A 361 PIVDFCWHQDGSHLAIATEGSVL 383 (393)
T ss_dssp CEEEEEECTTSSEEEEEESSEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCCeE
Confidence 99999999999999999987753
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.5e-29 Score=250.14 Aligned_cols=299 Identities=12% Similarity=0.072 Sum_probs=214.3
Q ss_pred ccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCc---CCCC-CCccc-ccc----------------------------
Q 013274 43 KGSINSLQVDLTEERYLLSGASDSSVAVYDVQRAT---DYEG-GGHIA-KHR---------------------------- 89 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~---~~~~-~~~~~-~~~---------------------------- 89 (446)
..++++++|++ +|++|+++ .++.|++||+.++. .... ..... ...
T Consensus 4 ~~p~~~v~~s~-dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (450)
T 2vdu_B 4 IHPLQNLLTSR-DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKG 81 (450)
T ss_dssp ECCCCEEEECS-SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC---------------------------------
T ss_pred cccEEEEEecC-CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcC
Confidence 35789999997 56766555 68899999998776 1100 00000 000
Q ss_pred -------ceEEeccccccCccccEeEEEEeecCCcEE-EEEeCCCeEEEEECC--CCeeeEEEe---cCCceEEeeeccC
Q 013274 90 -------SVFVVDKQHEHGHKYAISSAIWYPVDTGLF-VTGSYDHYVKVWDTN--CTRVVMNFK---MPGKVYRTAMSPL 156 (446)
Q Consensus 90 -------~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l-~s~s~D~~i~iWd~~--~~~~~~~~~---~~~~~~~~~~~~~ 156 (446)
...........+|...|.++.|+| ++++| ++++.|++|++||+. ++..+..+. +...+.++++++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 160 (450)
T 2vdu_B 82 DSIKRTAAKVPSPGLGAPPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED 160 (450)
T ss_dssp ------------------CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT
T ss_pred ccccccCccccCCCCCCCccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC
Confidence 000000111235777899999987 67775 999999999999998 777776663 4566888888875
Q ss_pred CCCceEEEEeeCCCcEEEEeCCCCceee----eeeCCCCCeEEEEEecC---CCeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 157 AASHMLIAAGTEDVQVRLCDIASGAISQ----TLSGHRDGIMTVEWSTS---SEWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 157 ~~~~~~lasgs~d~~v~vwd~~~~~~~~----~l~~h~~~v~sv~~s~~---~~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
..+|++|+.++.|++|++.++.... .+.+|.+.|.+++|+|+ ++ +|++|+.|++|++||++++.++..+
T Consensus 161 ---~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~ 236 (450)
T 2vdu_B 161 ---DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQCFIVDKW 236 (450)
T ss_dssp ---SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESCTTCEEEE
T ss_pred ---CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCCCceeeee
Confidence 3588999999999999998886544 78899999999999999 76 4789999999999999765432211
Q ss_pred ecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccc
Q 013274 230 DQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY 309 (446)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 309 (446)
..+|.
T Consensus 237 ---------------------------------------------------------------------------~~~h~ 241 (450)
T 2vdu_B 237 ---------------------------------------------------------------------------LFGHK 241 (450)
T ss_dssp ---------------------------------------------------------------------------CCCCS
T ss_pred ---------------------------------------------------------------------------ecCCC
Confidence 13577
Q ss_pred cCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE----------------------eecCCCeEEEEcCCC
Q 013274 310 GAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR----------------------LQTSKPIQLATTQDP 367 (446)
Q Consensus 310 ~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~ 367 (446)
+.|.+++|+ +|.+|++|+.|++|++||+.+++.... +.... ........+++.+++
T Consensus 242 ~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~ 319 (450)
T 2vdu_B 242 HFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLST-FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNL 319 (450)
T ss_dssp SCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEE-EECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSS
T ss_pred CceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeee-ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCC
Confidence 889999999 999999999999999999998764221 11000 001223457888888
Q ss_pred cEEEEeC--CCceEEEEe--ecC---ceEEEecccccceEEEEEcCCCCEEEEeeC------CCcEEEeCCC
Q 013274 368 AVVFVPC--MTAVKAFDI--WSG---KTCLTFRGHYEYVNCCCFSSQDQELYTGGN------DRQILVWCPS 426 (446)
Q Consensus 368 ~~~~~~~--~~~~~~~d~--~~~---~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~------D~~v~vW~~~ 426 (446)
..+++++ ...+++|++ .++ +.+..+.+| +.|.+++|+|++.+++.++. +..|++|..+
T Consensus 320 ~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 320 PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8887775 468999999 555 567788898 88999999996544444443 5668999654
No 85
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=7.9e-30 Score=244.25 Aligned_cols=251 Identities=14% Similarity=0.137 Sum_probs=176.7
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
++|.+.|++++|+| ++++|++|+.|+ ++|||+++.... .. .+...+..+.+.+....++
T Consensus 16 ~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~~------------~~-------~~~~~~~~~~~~~~~~~~~ 74 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAHI------------MS-------QEMRHLSKVRMLHRTNYVA 74 (355)
T ss_dssp ---CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEEE------------EE-------EECSCCCEEEECTTSSEEE
T ss_pred ccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCccee------------ee-------eecCCeEEEEEcCCCCEEE
Confidence 68999999999997 678999888775 889998754311 00 0111244555555334444
Q ss_pred EEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCCCCCeEEEEE
Q 013274 120 VTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGHRDGIMTVEW 198 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h~~~v~sv~~ 198 (446)
++++.|++|++||+.+++++..+.+...+..+.+.+. .++.+ .|+.|++||+.++ +.+..+.. +...+++
T Consensus 75 ~~~~~d~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~-----~~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~ 145 (355)
T 3vu4_A 75 FVTGVKEVVHIWDDVKKQDVSRIKVDAPVKDLFLSRE-----FIVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEF 145 (355)
T ss_dssp EECSSTTEEEEEETTTTEEEEEEECSSCEEEEEECSS-----EEEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEE
T ss_pred EEECCccEEEEEECCCCcEEEEEECCCceEEEEEcCC-----EEEEE-EcCEEEEEECCCCceeeEEecc---CCceEEE
Confidence 7888899999999999999998888888888887653 23333 3789999999998 77776665 4445566
Q ss_pred ecCCCeEEEE-eeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCcee
Q 013274 199 STSSEWILVT-GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVR 277 (446)
Q Consensus 199 s~~~~~~l~S-~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (446)
++ ..++++ |+.||.|++||++++......+...
T Consensus 146 s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~-------------------------------------------- 179 (355)
T 3vu4_A 146 SN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV-------------------------------------------- 179 (355)
T ss_dssp ET--TEEEEEESSCTTCEEEEECCC-------------------------------------------------------
T ss_pred Ec--cEEEEeCCCcCcEEEEEECCCCCccccccccc--------------------------------------------
Confidence 76 444333 7899999999998653211000000
Q ss_pred ecccceeecCCccccccCCCcccc-cccccccccCeEEEEEccCCCEEEEeecCCc-EEEEecCcCceeeeeeeEEEeec
Q 013274 278 QSSVGRIPAKGSVRQRLHPGMLSS-QDRATAHYGAVTGLKVTEDGMYLLSAGSDSR-IRLWDVESGRNTLVNFETVRLQT 355 (446)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~-i~lWd~~~~~~~~~~~~~~~~~~ 355 (446)
....+.+ .....+|.++|++++|+|+|++|+||+.|++ |++||+.+++.
T Consensus 180 -----------------~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~------------ 230 (355)
T 3vu4_A 180 -----------------QQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVL------------ 230 (355)
T ss_dssp ------------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCE------------
T ss_pred -----------------cccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcE------------
Confidence 0000000 1123578999999999999999999999999 99999986532
Q ss_pred CCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEec-c-cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 356 SKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR-G-HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~-g-H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
+.++. + |.+.|++++||||+++|++|+.|++|+||+++..
T Consensus 231 ---------------------------------~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 231 ---------------------------------VREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp ---------------------------------EEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ---------------------------------EEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 22344 5 9999999999999999999999999999998754
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=5.7e-30 Score=238.97 Aligned_cols=210 Identities=18% Similarity=0.296 Sum_probs=167.6
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC--eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEe
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT--RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd 176 (446)
.+|...|.++.|+| ++++||||+.|++|+|||+... +++..+. +.+.+.+++|++.. +..+|++|+.|+.|++||
T Consensus 6 ~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~-~g~~l~s~s~D~~v~iWd 83 (297)
T 2pm7_B 6 NAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCSYDGKVMIWK 83 (297)
T ss_dssp CSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGG-GCSEEEEEETTTEEEEEE
T ss_pred cCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCC-cCCEEEEEcCCCEEEEEE
Confidence 58999999999886 7899999999999999999753 4455554 45668888887531 235899999999999999
Q ss_pred CCCCc--eeeeeeCCCCCeEEEEEecC--CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 177 IASGA--ISQTLSGHRDGIMTVEWSTS--SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 177 ~~~~~--~~~~l~~h~~~v~sv~~s~~--~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
++++. .+..+.+|...|.+++|+|+ ++ +|++++.|++|++||++......
T Consensus 84 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~------------------------- 137 (297)
T 2pm7_B 84 EENGRWSQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS------------------------- 137 (297)
T ss_dssp BSSSCBCCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC-------------------------
T ss_pred cCCCceEEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee-------------------------
Confidence 99874 55678899999999999997 55 57999999999999987532100
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC------------
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED------------ 320 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d------------ 320 (446)
.....+|...|.+++|+|+
T Consensus 138 -------------------------------------------------~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~ 168 (297)
T 2pm7_B 138 -------------------------------------------------PIIIDAHAIGVNSASWAPATIEEDGEHNGTK 168 (297)
T ss_dssp -------------------------------------------------CEEEECCSSCEEEEEECCCC-----------
T ss_pred -------------------------------------------------eeeeecccCccceEeecCCcccccccCCCCC
Confidence 0012357778999999987
Q ss_pred -CCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccce
Q 013274 321 -GMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYV 399 (446)
Q Consensus 321 -g~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v 399 (446)
+++|++|+.|++|++||+.++.... ....+|.+|.+.|
T Consensus 169 ~~~~l~sgs~D~~v~lwd~~~~~~~~-----------------------------------------~~~~~l~~H~~~V 207 (297)
T 2pm7_B 169 ESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------------------VLESTLEGHSDWV 207 (297)
T ss_dssp -CCEEEEEETTSCEEEEEEETTTTEE-----------------------------------------EEEEEECCCSSCE
T ss_pred CcceEEEEcCCCcEEEEEEcCCCceE-----------------------------------------EEEEEecCCCCce
Confidence 5799999999999999987643210 0124678999999
Q ss_pred EEEEEcCCC---CEEEEeeCCCcEEEeCCCC
Q 013274 400 NCCCFSSQD---QELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 400 ~~~~fSpd~---~~lvtgs~D~~v~vW~~~~ 427 (446)
.+++|+|++ ++|+|||.|++|+||+++.
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 999999995 8999999999999998865
No 87
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=7.9e-30 Score=235.99 Aligned_cols=193 Identities=12% Similarity=0.079 Sum_probs=138.9
Q ss_pred CCcEEEEEe--CCCeEEEEEC-CCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCC
Q 013274 115 DTGLFVTGS--YDHYVKVWDT-NCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR 190 (446)
Q Consensus 115 ~~~~l~s~s--~D~~i~iWd~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~ 190 (446)
+++++.+++ .|++|++|++ .+++.+..+.. +..+..++|++...+..+|++|+.|++|+|||++++++++++.+|.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 444555533 6999999999 45776665443 3345667777744456799999999999999999999999998754
Q ss_pred C---CeEEEEEecCCCeE-----------EEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccC
Q 013274 191 D---GIMTVEWSTSSEWI-----------LVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG 256 (446)
Q Consensus 191 ~---~v~sv~~s~~~~~~-----------l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (446)
. .+.+++|+|+++.+ ++||+.|++|++||..+++++..+....
T Consensus 224 ~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~----------------------- 280 (356)
T 2w18_A 224 SYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL----------------------- 280 (356)
T ss_dssp ---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC-----------------------
T ss_pred cceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec-----------------------
Confidence 3 57778999998753 3678999999999998876654321000
Q ss_pred CCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEE
Q 013274 257 QNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 336 (446)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lW 336 (446)
..+|.+.+.+..+ ++.++++|+.|++||||
T Consensus 281 ------------------------------------------------p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIW 310 (356)
T 2w18_A 281 ------------------------------------------------PPGQAGRFLEGDV--KDHCAAAILTSGTIAIW 310 (356)
T ss_dssp ------------------------------------------------CTTCCCCEEEEEE--ETTEEEEEETTSCEEEE
T ss_pred ------------------------------------------------cCCCcceeEcccc--CCCEEEEEcCCCcEEEE
Confidence 0133333433344 38899999999999999
Q ss_pred ecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceE-EEEEcCCCCEEEEee
Q 013274 337 DVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVN-CCCFSSQDQELYTGG 415 (446)
Q Consensus 337 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~-~~~fSpd~~~lvtgs 415 (446)
|+.+++ .+.+|.+|...+. +++|||||++|+|||
T Consensus 311 Dl~tGk---------------------------------------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS 345 (356)
T 2w18_A 311 DLLLGQ---------------------------------------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQ 345 (356)
T ss_dssp ETTTCS---------------------------------------------EEEEECCC--CCCCEEEECSSSSEEEEEC
T ss_pred ECCCCc---------------------------------------------EEEEecCCCCCeEEEEEECCCCCEEEEEE
Confidence 998754 2356678887665 689999999999999
Q ss_pred CCCcEEEeCC
Q 013274 416 NDRQILVWCP 425 (446)
Q Consensus 416 ~D~~v~vW~~ 425 (446)
.|++||||++
T Consensus 346 ~D~TIklWd~ 355 (356)
T 2w18_A 346 KDGNIFVYHY 355 (356)
T ss_dssp TTSCEEEEEE
T ss_pred CCCcEEEecC
Confidence 9999999985
No 88
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=4.6e-29 Score=260.07 Aligned_cols=248 Identities=17% Similarity=0.292 Sum_probs=198.8
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe-----eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-----VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQV 172 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v 172 (446)
..+|...|+++.+++.++++|+|||.|++|++||+.... ....+. +.+.+.++++++. ..+|++|+.|+.|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~---g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD---GQFALSGSWDGEL 454 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT---SSEEEEEETTSEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC---CCEEEEEeCCCcE
Confidence 458999999999988777899999999999999997532 233333 4456788888874 4589999999999
Q ss_pred EEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 173 RLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 173 ~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
++||+.++.....+.+|.+.|.+++|+|+++. |+||+.|++|++||+.........
T Consensus 455 ~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~-l~s~s~D~~i~iwd~~~~~~~~~~----------------------- 510 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQ-IVSASRDRTIKLWNTLGECKYTIS----------------------- 510 (694)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEEC-----------------------
T ss_pred EEEECCCCcceeEEeCCCCCEEEEEEeCCCCE-EEEEeCCCEEEEEECCCCcceeec-----------------------
Confidence 99999999999999999999999999999986 789999999999997542111000
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC--CEEEEeecC
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG--MYLLSAGSD 330 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg--~~l~sgs~D 330 (446)
....+|...|.+++|+|++ .+|++|+.|
T Consensus 511 --------------------------------------------------~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 511 --------------------------------------------------EGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp --------------------------------------------------SSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred --------------------------------------------------cCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 0013577889999999987 589999999
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCCC
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ 409 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~ 409 (446)
++|++||+.+++.. ..+..+......++++|++..+++++. ..+++||+.+++.+..+..| ..|.+++|||++.
T Consensus 541 ~~v~vwd~~~~~~~----~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~ 615 (694)
T 3dm0_A 541 KTVKVWNLSNCKLR----STLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN-SVIHALCFSPNRY 615 (694)
T ss_dssp SCEEEEETTTCCEE----EEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCS-SCEEEEEECSSSS
T ss_pred CeEEEEECCCCcEE----EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCC-CcEEEEEEcCCCc
Confidence 99999999876532 122233455667899999998888754 68999999999888877654 5799999999998
Q ss_pred EEEEeeCCCcEEEeCCCCCC
Q 013274 410 ELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 410 ~lvtgs~D~~v~vW~~~~~~ 429 (446)
+|++++ |+.|+||+++...
T Consensus 616 ~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 616 WLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp EEEEEE-TTEEEEEETTTTE
T ss_pred EEEEEc-CCCEEEEECCCCC
Confidence 887765 5669999998653
No 89
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.8e-29 Score=243.36 Aligned_cols=260 Identities=13% Similarity=0.172 Sum_probs=201.0
Q ss_pred cccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe------eeEEEe-cCCceEEeeeccC-CCCc---eEEEEe
Q 013274 98 HEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR------VVMNFK-MPGKVYRTAMSPL-AASH---MLIAAG 166 (446)
Q Consensus 98 ~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~------~~~~~~-~~~~~~~~~~~~~-~~~~---~~lasg 166 (446)
...+|...|+++.++| .+|++|+.|++|++||+.+++ .+..+. +...+.++.+++. ..+. .+|+++
T Consensus 11 ~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp ESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEE
Confidence 3468999999999976 699999999999999999887 444444 4566888888874 0113 689999
Q ss_pred eCCCcEEEEeCCCCce-----eeeeeCC-----CCCeEEEEEe----cCCCeEEEEeeCCCcEEEEEccC------Ccee
Q 013274 167 TEDVQVRLCDIASGAI-----SQTLSGH-----RDGIMTVEWS----TSSEWILVTGGCDGAIRFWDIRR------AGCF 226 (446)
Q Consensus 167 s~d~~v~vwd~~~~~~-----~~~l~~h-----~~~v~sv~~s----~~~~~~l~S~s~Dg~I~iWd~~~------~~~~ 226 (446)
+.|+.|++||++++.. ...+.+| ...|.+++|+ |+++..|++++.||.|++||+++ ..++
T Consensus 88 ~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 167 (397)
T 1sq9_A 88 SFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTL 167 (397)
T ss_dssp ETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTT
T ss_pred cCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccccccee
Confidence 9999999999999887 8888888 5999999999 98875378999999999999875 2111
Q ss_pred EEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccccc
Q 013274 227 RVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRAT 306 (446)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (446)
. ..+...+... .....
T Consensus 168 ~--------------------------------------------------~~~~~~~~~~--------------~~~~~ 183 (397)
T 1sq9_A 168 N--------------------------------------------------WSPTLELQGT--------------VESPM 183 (397)
T ss_dssp C--------------------------------------------------CCCEEEEEEE--------------ECCSS
T ss_pred e--------------------------------------------------ccCcceeeee--------------ecccc
Confidence 0 0000000000 00012
Q ss_pred ccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEe---e---cCCCeEEEEcCCCcEEEEeCC----C
Q 013274 307 AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRL---Q---TSKPIQLATTQDPAVVFVPCM----T 376 (446)
Q Consensus 307 ~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~----~ 376 (446)
.|...|.+++|+|++ +|++++.|+.|++||+.+++.. ..+.. + ......+++++++..+++++. .
T Consensus 184 ~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~----~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g 258 (397)
T 1sq9_A 184 TPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPL----YNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFG 258 (397)
T ss_dssp SSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEE----EEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEE
T ss_pred CCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCcee----EEEeccccccccCCccceEEECCCCCEEEEEecCCCCc
Confidence 467789999999999 9999999999999999886432 12222 2 345567889999988888765 4
Q ss_pred ceEEEEeecCceEEEecc-------------cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 377 AVKAFDIWSGKTCLTFRG-------------HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 377 ~~~~~d~~~~~~~~~l~g-------------H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+++||+.+++.+..+.+ |...|++++|+|++++|++|+.|+.|+||++....
T Consensus 259 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 324 (397)
T 1sq9_A 259 CITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKE 324 (397)
T ss_dssp EEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCc
Confidence 899999999999999999 99999999999999999999999999999997654
No 90
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=9.2e-30 Score=250.70 Aligned_cols=257 Identities=15% Similarity=0.198 Sum_probs=194.2
Q ss_pred CccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe-----------eeEEEecC-------------CceEEeeeccC
Q 013274 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-----------VVMNFKMP-------------GKVYRTAMSPL 156 (446)
Q Consensus 101 gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----------~~~~~~~~-------------~~~~~~~~~~~ 156 (446)
.|...|.++.|+| ++++||+|+.|+.|+|||+.++. +...+..+ +.+.++.+++.
T Consensus 26 ~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 5778999999987 88999999999999999998766 34445433 55788888875
Q ss_pred CCCceEEEEeeCCCcEEEEeCCCCcee---------------------------------------ee-eeCCCCCeEEE
Q 013274 157 AASHMLIAAGTEDVQVRLCDIASGAIS---------------------------------------QT-LSGHRDGIMTV 196 (446)
Q Consensus 157 ~~~~~~lasgs~d~~v~vwd~~~~~~~---------------------------------------~~-l~~h~~~v~sv 196 (446)
.. ..+|++++.|+.|++||+.++... .. +.+|...|.++
T Consensus 105 ~~-~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 105 KN-AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CS-SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CC-cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 32 147888999999999999764331 12 36899999999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCC-ceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+|+|+++. |++| .|++|++||+++. .++..+...
T Consensus 184 ~~~~~~~~-l~s~-~d~~i~iwd~~~~~~~~~~~~~~------------------------------------------- 218 (447)
T 3dw8_B 184 SINSDYET-YLSA-DDLRINLWHLEITDRSFNIVDIK------------------------------------------- 218 (447)
T ss_dssp EECTTSSE-EEEE-CSSEEEEEETTEEEEEEEEEECC-------------------------------------------
T ss_pred EEcCCCCE-EEEe-CCCeEEEEECCCCCceeeeeecc-------------------------------------------
Confidence 99999885 6788 7999999999842 222221100
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC-CEEEEeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG-MYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg-~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
.....+|...|++++|+|++ .+|++|+.|++|++||+.+++........+..+
T Consensus 219 --------------------------~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 272 (447)
T 3dw8_B 219 --------------------------PANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEP 272 (447)
T ss_dssp --------------------------CSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC
T ss_pred --------------------------cccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccC
Confidence 00124678889999999999 999999999999999999865311001111111
Q ss_pred cC------------CCeEEEEcCCCcEEEEeCCCceEEEEeec-CceEEEecccccc---------------eEEEEEcC
Q 013274 355 TS------------KPIQLATTQDPAVVFVPCMTAVKAFDIWS-GKTCLTFRGHYEY---------------VNCCCFSS 406 (446)
Q Consensus 355 ~~------------~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~l~gH~~~---------------v~~~~fSp 406 (446)
.. ....++++|++.++++++...+++||+.+ ++.+.++.+|... +..++|+|
T Consensus 273 ~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~ 352 (447)
T 3dw8_B 273 EDPSNRSFFSEIISSISDVKFSHSGRYMMTRDYLSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG 352 (447)
T ss_dssp -----CCHHHHHTTCEEEEEECTTSSEEEEEESSEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT
T ss_pred CCccccccccccCceEEEEEECCCCCEEEEeeCCeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECC
Confidence 11 45678899999988887668899999987 8888999999753 23499999
Q ss_pred CCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 407 QDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 407 d~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
|+++|++|+.|+.|+||++.+...
T Consensus 353 ~~~~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 353 SDSVVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp TSSEEEEECSTTEEEEEETTTCCE
T ss_pred CCCEEEEeccCCEEEEEEcCCCcc
Confidence 999999999999999999986643
No 91
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.5e-29 Score=241.87 Aligned_cols=254 Identities=15% Similarity=0.195 Sum_probs=197.4
Q ss_pred cCccccEeEEEEeec---CCcEEEEEeCCCeEEEEECCCCeeeEEEe------cCCceEEeeeccCCCC-ceEEEEeeCC
Q 013274 100 HGHKYAISSAIWYPV---DTGLFVTGSYDHYVKVWDTNCTRVVMNFK------MPGKVYRTAMSPLAAS-HMLIAAGTED 169 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~---~~~~l~s~s~D~~i~iWd~~~~~~~~~~~------~~~~~~~~~~~~~~~~-~~~lasgs~d 169 (446)
.+|...|.++.++|. ....+++++.|+.|++||+.+++.+..+. ..+.+.++++++.... ..+|++|+.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 589999999999973 23455556666699999999877665554 2356888899886432 5689999999
Q ss_pred CcEEEEeCCCCceeeeeeCCCCCeEEEEEec-CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCccccccee
Q 013274 170 VQVRLCDIASGAISQTLSGHRDGIMTVEWST-SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVS 248 (446)
Q Consensus 170 ~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~-~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (446)
+.|++||+++++.+..+.+|...|.++.|+| +++ +|++++.||.|++||+++++....+.
T Consensus 95 g~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~l~s~~~dg~i~iwd~~~~~~~~~~~------------------ 155 (366)
T 3k26_A 95 GIIRIINPITMQCIKHYVGHGNAINELKFHPRDPN-LLLSVSKDHALRLWNIQTDTLVAIFG------------------ 155 (366)
T ss_dssp CEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTT-EEEEEETTSCEEEEETTTTEEEEEEC------------------
T ss_pred CEEEEEEchhceEeeeecCCCCcEEEEEECCCCCC-EEEEEeCCCeEEEEEeecCeEEEEec------------------
Confidence 9999999999999999999999999999999 665 58999999999999998765433221
Q ss_pred eccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee
Q 013274 249 ISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG 328 (446)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs 328 (446)
...+|...|.+++|+|++.+|++++
T Consensus 156 -------------------------------------------------------~~~~~~~~v~~~~~~~~~~~l~~~~ 180 (366)
T 3k26_A 156 -------------------------------------------------------GVEGHRDEVLSADYDLLGEKIMSCG 180 (366)
T ss_dssp -------------------------------------------------------STTSCSSCEEEEEECTTSSEEEEEE
T ss_pred -------------------------------------------------------ccccccCceeEEEECCCCCEEEEec
Confidence 0125677899999999999999999
Q ss_pred cCCcEEEEecCcCceeee------------------------eeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEe
Q 013274 329 SDSRIRLWDVESGRNTLV------------------------NFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDI 383 (446)
Q Consensus 329 ~D~~i~lWd~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~ 383 (446)
.|+.|++||+.+++.... .+.....+......+++. +..+++++ ...+++||+
T Consensus 181 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~ 258 (366)
T 3k26_A 181 MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKP 258 (366)
T ss_dssp TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEE
T ss_pred CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeC
Confidence 999999999987542100 000000123334455565 45666554 468999999
Q ss_pred ecCce--------------EEEecccccceEEEEEcCC--CCEEEEeeCCCcEEEeCCCCCC
Q 013274 384 WSGKT--------------CLTFRGHYEYVNCCCFSSQ--DQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 384 ~~~~~--------------~~~l~gH~~~v~~~~fSpd--~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+++. +..+.+|...|++++|+|+ +++|++|+.|+.|++|++....
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 259 GKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVED 320 (366)
T ss_dssp SSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSS
T ss_pred CCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCC
Confidence 87644 7789999999999999999 9999999999999999998754
No 92
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=3.6e-30 Score=248.08 Aligned_cols=245 Identities=10% Similarity=0.045 Sum_probs=184.6
Q ss_pred ccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC--eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC
Q 013274 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT--RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178 (446)
Q Consensus 102 h~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~ 178 (446)
|...|.++.++| ++++|++|+.|++|++||+.++ +.+..+. +.+.+.++++++. ..+|++++.|+.|++||++
T Consensus 10 ~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~---~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 10 LPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK---SNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp CSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT---TCCEEEEETTSSEEEC---
T ss_pred CCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC---CCEEEEEeCCCeEEEEEcC
Confidence 556788999987 8889999999999999999987 5555554 3456888888875 3579999999999999999
Q ss_pred CCc---eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 179 SGA---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 179 ~~~---~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
++. ....+.+|...|.+++|+|+++. |++++.|+.|++||++.+......
T Consensus 86 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~iwd~~~~~~~~~~-------------------------- 138 (377)
T 3dwl_C 86 PDGTWKQTLVLLRLNRAATFVRWSPNEDK-FAVGSGARVISVCYFEQENDWWVS-------------------------- 138 (377)
T ss_dssp ---CCCCEEECCCCSSCEEEEECCTTSSC-CEEEESSSCEEECCC-----CCCC--------------------------
T ss_pred CCCceeeeeEecccCCceEEEEECCCCCE-EEEEecCCeEEEEEECCcccceee--------------------------
Confidence 887 66778899999999999999885 789999999999998764310000
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccc-cccCeEEEEEccCCCEEEEeecCCcEE
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATA-HYGAVTGLKVTEDGMYLLSAGSDSRIR 334 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~fs~dg~~l~sgs~D~~i~ 334 (446)
....+ |.+.|.+++|+|++++|++|+.|++|+
T Consensus 139 -----------------------------------------------~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~ 171 (377)
T 3dwl_C 139 -----------------------------------------------KHLKRPLRSTILSLDWHPNNVLLAAGCADRKAY 171 (377)
T ss_dssp -----------------------------------------------EEECSSCCSCEEEEEECTTSSEEEEEESSSCEE
T ss_pred -----------------------------------------------eEeecccCCCeEEEEEcCCCCEEEEEeCCCEEE
Confidence 00122 778899999999999999999999999
Q ss_pred EEecCcCce--------------eeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCce----EEEeccc
Q 013274 335 LWDVESGRN--------------TLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKT----CLTFRGH 395 (446)
Q Consensus 335 lWd~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~----~~~l~gH 395 (446)
+||+..... .......+ .+......++++|++..+++++. ..+++||+.+++. +..+.+|
T Consensus 172 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 250 (377)
T 3dwl_C 172 VLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLS 250 (377)
T ss_dssp EEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECS
T ss_pred EEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCC
Confidence 999864220 00011111 22344567889999988777654 5899999999987 7899999
Q ss_pred ccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 396 YEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 396 ~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
...|++++|+||+++|++|+.|+.+ +|+..
T Consensus 251 ~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 251 QLPLRSLLWANESAIVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SSCEEEEEEEETTEEEEEESSSSEE-EECCC
T ss_pred CCceEEEEEcCCCCEEEEEcCCcEE-EEEeC
Confidence 9999999999999999999877777 55443
No 93
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=240.60 Aligned_cols=265 Identities=8% Similarity=0.071 Sum_probs=190.6
Q ss_pred CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECC
Q 013274 55 EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN 134 (446)
Q Consensus 55 ~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 134 (446)
++.+|+||+.||+|++||++++.... ... ...|.++.++|. ++|++.|++|++|+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~------------~~~-------~~~v~~~~~~~~----~~s~s~D~~i~~w~~~ 103 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTIT------------TIT-------TPNPRTGGEHPA----IISRGPCNRLLLLYPG 103 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEE------------EEE-------EECCCTTCCCCS----EEEECSTTEEEEEETT
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEE------------EEe-------cCCceeeeeCCc----eEEecCCCeEEEEEcc
Confidence 56799999999999999998764310 000 233444555552 9999999999999765
Q ss_pred ---------CCeeeEEEec--CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee-CCCCCeEEEEEecCC
Q 013274 135 ---------CTRVVMNFKM--PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS-GHRDGIMTVEWSTSS 202 (446)
Q Consensus 135 ---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~-~h~~~v~sv~~s~~~ 202 (446)
+++.+..+.. .+.+.++++++.. +..++++++.|+.|++||+++++....+. .|...+.+++|+|++
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg 182 (343)
T 3lrv_A 104 NQITILDSKTNKVLREIEVDSANEIIYMYGHNEV-NTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDS 182 (343)
T ss_dssp TEEEEEETTTCCEEEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTS
T ss_pred CceEEeecCCcceeEEeecCCCCCEEEEEcCCCC-CCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCC
Confidence 4444444443 2557888887721 23589999999999999999998876664 456689999999998
Q ss_pred CeEEEEeeCCCcEEEEEccCCcee-EEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 203 EWILVTGGCDGAIRFWDIRRAGCF-RVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 203 ~~~l~S~s~Dg~I~iWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
.. |++|+.||.|++||++++.+. ..
T Consensus 183 ~~-lasg~~dg~i~iwd~~~~~~~~~~----------------------------------------------------- 208 (343)
T 3lrv_A 183 LL-LALYSPDGILDVYNLSSPDQASSR----------------------------------------------------- 208 (343)
T ss_dssp CE-EEEECTTSCEEEEESSCTTSCCEE-----------------------------------------------------
T ss_pred CE-EEEEcCCCEEEEEECCCCCCCccE-----------------------------------------------------
Confidence 74 799999999999999865321 10
Q ss_pred ceeecCCccccccCCCccccccccc-ccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCC--C
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRAT-AHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK--P 358 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~--~ 358 (446)
.. +|.++|++|+|+|+|.+|++++ |++|++||+.+.+... .+......... .
T Consensus 209 -----------------------~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~ 263 (343)
T 3lrv_A 209 -----------------------FPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTL-AYPTYTIPEFKTGT 263 (343)
T ss_dssp -----------------------CCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCB-SSCCCBC-----CC
T ss_pred -----------------------EeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcce-eecccccccccccc
Confidence 12 3778899999999999999999 5599999999865321 11110000011 1
Q ss_pred eEEEEcCCCcEEEEeC--CCceEEEEeecCceEEEecccccceEEEEEcC---CCCEEEEeeCCCcEEEeCCC
Q 013274 359 IQLATTQDPAVVFVPC--MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS---QDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 359 ~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp---d~~~lvtgs~D~~v~vW~~~ 426 (446)
..++++|++.++++++ ...+++|++.+....-.. .++.+++|+| +.+.|++++.|+.++++-..
T Consensus 264 ~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 264 VTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred eEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 3588999999888843 678999999665432222 5678899999 99999999999999998543
No 94
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.8e-29 Score=238.36 Aligned_cols=251 Identities=13% Similarity=0.234 Sum_probs=193.8
Q ss_pred cCccccEeEEEEeecCCcEEEEEeC---CCeEEEEECCCCeeeE--EEecCCceEEeeeccCCCCceEEEEeeCCCcEEE
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSY---DHYVKVWDTNCTRVVM--NFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~---D~~i~iWd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~v 174 (446)
.+|...|.++.|+|....++++++. |++|++||+.+++... .+.+.+.+.++++++...+..+|++|+.|+.|++
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i 94 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHI 94 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEE
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEE
Confidence 5799999999999854456677776 9999999999887643 3456677899999986433568999999999999
Q ss_pred EeCCCCc-eeeeeeCCCCCeEEEEE------ecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCcccccc
Q 013274 175 CDIASGA-ISQTLSGHRDGIMTVEW------STSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRK 246 (446)
Q Consensus 175 wd~~~~~-~~~~l~~h~~~v~sv~~------s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 246 (446)
||++++. ....+.+|.+.|.++.| +|+++. |++++.||.|++||++++. ....+....
T Consensus 95 wd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~-l~~~~~d~~i~vwd~~~~~~~~~~~~~~~------------- 160 (357)
T 3i2n_A 95 WNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPE-IVTGSRDGTVKVWDPRQKDDPVANMEPVQ------------- 160 (357)
T ss_dssp ECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCE-EEEEETTSCEEEECTTSCSSCSEEECCCT-------------
T ss_pred EeCCCCCccEEEEEecccceEEEeeccccccCCCccE-EEEEeCCCeEEEEeCCCCCCcceeccccC-------------
Confidence 9999988 88899999999999965 567774 7899999999999998653 221111000
Q ss_pred eeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEE----EccCCC
Q 013274 247 VSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLK----VTEDGM 322 (446)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~----fs~dg~ 322 (446)
..+...+.+++ |+|++.
T Consensus 161 -----------------------------------------------------------~~~~~~v~~~~~~~~~~~~~~ 181 (357)
T 3i2n_A 161 -----------------------------------------------------------GENKRDCWTVAFGNAYNQEER 181 (357)
T ss_dssp -----------------------------------------------------------TSCCCCEEEEEEECCCC-CCC
T ss_pred -----------------------------------------------------------CCCCCceEEEEEEeccCCCCC
Confidence 01123577777 789999
Q ss_pred EEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcC---CCcEEEEeC-CCceEEEEeecCceEEEec-----
Q 013274 323 YLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ---DPAVVFVPC-MTAVKAFDIWSGKTCLTFR----- 393 (446)
Q Consensus 323 ~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-~~~~~~~d~~~~~~~~~l~----- 393 (446)
+|++++.|+.|++||+.+++... ..........++++| ++..+++++ ...+++||+.+++....+.
T Consensus 182 ~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~ 256 (357)
T 3i2n_A 182 VVCAGYDNGDIKLFDLRNMALRW-----ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK 256 (357)
T ss_dssp EEEEEETTSEEEEEETTTTEEEE-----EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE
T ss_pred EEEEEccCCeEEEEECccCceee-----ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC
Confidence 99999999999999999875311 112234556788888 777777765 4689999998876655444
Q ss_pred ccccceEEEEEcCCCC-EEEEeeCCCcEEEeCCCCC
Q 013274 394 GHYEYVNCCCFSSQDQ-ELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 394 gH~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~~~~~ 428 (446)
+|...|++++|+|+++ +|++|+.|+.|++|++...
T Consensus 257 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~ 292 (357)
T 3i2n_A 257 AHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYP 292 (357)
T ss_dssp CCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECC
T ss_pred CCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCC
Confidence 9999999999999999 8999999999999998744
No 95
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=2.2e-29 Score=246.01 Aligned_cols=241 Identities=16% Similarity=0.198 Sum_probs=187.5
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT 185 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~ 185 (446)
++++.++| ++++|++++.|++|++||+.+++....+..........+.+ +..+|++|+.|+.|++||++++.....
T Consensus 59 ~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~l~~~~~dg~i~iwd~~~~~~~~~ 134 (420)
T 3vl1_A 59 GKGNTFEK-VGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKL---QMRRFILGTTEGDIKVLDSNFNLQREI 134 (420)
T ss_dssp CTTCEEEE-EETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECS---SSCEEEEEETTSCEEEECTTSCEEEEE
T ss_pred ccceeeee-cCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEec---CCCEEEEEECCCCEEEEeCCCcceeee
Confidence 33556776 78899999999999999998776654444332232233444 446899999999999999999998888
Q ss_pred eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCC
Q 013274 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRA 265 (446)
Q Consensus 186 l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (446)
+.+|.+.|.+++|+|+++. |++++.|++|++||++++++...
T Consensus 135 ~~~h~~~v~~~~~~~~~~~-l~s~s~d~~i~iwd~~~~~~~~~------------------------------------- 176 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEA-LISSSQDMQLKIWSVKDGSNPRT------------------------------------- 176 (420)
T ss_dssp TTSSSSCEEEEEECTTSSE-EEEEETTSEEEEEETTTCCCCEE-------------------------------------
T ss_pred cccccCccEEEEECCCCCE-EEEEeCCCeEEEEeCCCCcCceE-------------------------------------
Confidence 8999999999999999884 78999999999999986543221
Q ss_pred ccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceee
Q 013274 266 PQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTL 345 (446)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~ 345 (446)
..+|.+.|.+++|+|++.+|++++.|++|++||+.+++...
T Consensus 177 ---------------------------------------~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~ 217 (420)
T 3vl1_A 177 ---------------------------------------LIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIH 217 (420)
T ss_dssp ---------------------------------------EECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred ---------------------------------------EcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeE
Confidence 13577889999999999999999999999999999875321
Q ss_pred eeeeEEEee---------------------cCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEe-cccccceEEE
Q 013274 346 VNFETVRLQ---------------------TSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTF-RGHYEYVNCC 402 (446)
Q Consensus 346 ~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l-~gH~~~v~~~ 402 (446)
. +...... ......+++++++..+++++. ..+++||+.+++....+ .+|...|+++
T Consensus 218 ~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 296 (420)
T 3vl1_A 218 T-FNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSL 296 (420)
T ss_dssp E-ECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEE
T ss_pred E-eecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeE
Confidence 1 1100000 112223455678878777654 57999999998877665 4689999999
Q ss_pred EEcCCCC-EEEEeeCCCcEEEeCCCCC
Q 013274 403 CFSSQDQ-ELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 403 ~fSpd~~-~lvtgs~D~~v~vW~~~~~ 428 (446)
+|+|+++ +|++|+.|+.|++|++...
T Consensus 297 ~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 297 TVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred EEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999 9999999999999999765
No 96
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.5e-28 Score=235.27 Aligned_cols=250 Identities=18% Similarity=0.300 Sum_probs=194.9
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|.+.|++++|+| ++++|++|+.||.|++||++++... ....+|...|.++.+ ++.+|
T Consensus 131 ~~~~~~v~~v~~s~-~~~~l~~~~~dg~i~iwd~~~~~~~-----------------~~~~~~~~~v~~~~~---~~~~l 189 (401)
T 4aez_A 131 TDESTYVASVKWSH-DGSFLSVGLGNGLVDIYDVESQTKL-----------------RTMAGHQARVGCLSW---NRHVL 189 (401)
T ss_dssp CCTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEE---ETTEE
T ss_pred cCCCCCEEEEEECC-CCCEEEEECCCCeEEEEECcCCeEE-----------------EEecCCCCceEEEEE---CCCEE
Confidence 35899999999997 6789999999999999999765321 122479999999888 35799
Q ss_pred EEEeCCCeEEEEECCC-CeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEE
Q 013274 120 VTGSYDHYVKVWDTNC-TRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVE 197 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~ 197 (446)
++++.|++|++||+.. ...+..+. +.+.+..+.+++. ..+|++|+.|+.|++||++++.....+.+|...|.+++
T Consensus 190 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 190 SSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD---GLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT---SSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE
T ss_pred EEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC---CCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE
Confidence 9999999999999984 44444444 4567888888874 45899999999999999999999999999999999999
Q ss_pred EecCCCeEEEEee--CCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 198 WSTSSEWILVTGG--CDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 198 ~s~~~~~~l~S~s--~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
|+|++..++++++ .|+.|++||++++.++..+
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~---------------------------------------------- 300 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV---------------------------------------------- 300 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE----------------------------------------------
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE----------------------------------------------
Confidence 9998887788866 7999999999876543322
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEE--eecCCcEEEEecCcCceeeeeeeEEEe
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLS--AGSDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~s--gs~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
.|...|.+++|+|+|.+|++ |+.|+.|++||+.++.... ...+..
T Consensus 301 -------------------------------~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~--~~~~~~ 347 (401)
T 4aez_A 301 -------------------------------DAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTK--QVDIPA 347 (401)
T ss_dssp -------------------------------ECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEE--EEEEEC
T ss_pred -------------------------------eCCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCcccee--EEEecC
Confidence 12345899999999999998 5589999999998754321 112233
Q ss_pred ecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEe
Q 013274 354 QTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTF 392 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l 392 (446)
+......+++++++..+++++. ..+++|++.+++.+...
T Consensus 348 h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 348 HDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp CSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 4456777899999998888765 57999999988876544
No 97
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=1.8e-28 Score=236.81 Aligned_cols=253 Identities=12% Similarity=0.102 Sum_probs=196.9
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe---cCCceEEeeeccCCCCceEEEEeeCCCcEEEE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK---MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vw 175 (446)
..+|...|.++.|+|....+|++|+.|++|++||+.+++....+. +.+.+.++++++. +..+|++++.|+.|++|
T Consensus 69 ~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 69 ASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQF--NTNQLFVSSIRGATTLR 146 (383)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETT--EEEEEEEEETTTEEEEE
T ss_pred ccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCC--CCCEEEEEeCCCEEEEE
Confidence 358999999999998433899999999999999999888776665 4566888888873 34689999999999999
Q ss_pred eCCCCceeeeeeC---CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 176 DIASGAISQTLSG---HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 176 d~~~~~~~~~l~~---h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
|+++ .....+.. |...|.+++|+|+++. |++++.|+.|++||++ +.++..
T Consensus 147 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~i~i~d~~-~~~~~~------------------------ 199 (383)
T 3ei3_B 147 DFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQM-LATGDSTGRLLLLGLD-GHEIFK------------------------ 199 (383)
T ss_dssp ETTS-CEEEEEECCCCSSCCEEEEEEETTTTE-EEEEETTSEEEEEETT-SCEEEE------------------------
T ss_pred ECCC-CceEEEeccCCCCCCeEEEEECCCCCE-EEEECCCCCEEEEECC-CCEEEE------------------------
Confidence 9986 44455544 4588999999999885 7899999999999984 222111
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecCC
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSDS 331 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~ 331 (446)
..+|.+.|.+++|+|++. +|++|+.|+
T Consensus 200 ----------------------------------------------------~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 227 (383)
T 3ei3_B 200 ----------------------------------------------------EKLHKAKVTHAEFNPRCDWLMATSSVDA 227 (383)
T ss_dssp ----------------------------------------------------EECSSSCEEEEEECSSCTTEEEEEETTS
T ss_pred ----------------------------------------------------eccCCCcEEEEEECCCCCCEEEEEeCCC
Confidence 135677899999999999 999999999
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcC-CCcEEEEeCC-CceEEEEeecCceEEEecccc-------------
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHY------------- 396 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~------------- 396 (446)
+|++||+.+.+......... .+......+++++ ++..+++++. ..+++||+.+++....+.+|.
T Consensus 228 ~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (383)
T 3ei3_B 228 TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKAT 306 (383)
T ss_dssp EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCE
T ss_pred EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEe
Confidence 99999999743211111112 2345566788999 8888877654 689999999988877777764
Q ss_pred ----cceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCCCCcCC
Q 013274 397 ----EYVNCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVDA 435 (446)
Q Consensus 397 ----~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~~~~~~ 435 (446)
+.+..++|+||+++ +|+.|++|+||++.+........
T Consensus 307 ~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~ 347 (383)
T 3ei3_B 307 WHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLR 347 (383)
T ss_dssp ECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEEC
T ss_pred ccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeec
Confidence 45566888999888 99999999999998765443333
No 98
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.5e-29 Score=247.31 Aligned_cols=254 Identities=15% Similarity=0.232 Sum_probs=190.5
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCC---Ce---eeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEE
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNC---TR---VVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~ 173 (446)
.+|...|+++.++|.++.+|+||+.|++|++||+.+ +. ....+.+.+.+.++++++. ..+|++|+.|+.|+
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~s~dg~i~ 136 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPN---FDAFAVSSKDGQII 136 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTT---SSEEEEEETTSEEE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCC---CCEEEEEeCCCEEE
Confidence 579999999999875788999999999999999866 32 3455567778999999874 45899999999999
Q ss_pred EEeCC---CCceeeeeeC------------CCCCeEEEE--EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccc
Q 013274 174 LCDIA---SGAISQTLSG------------HRDGIMTVE--WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL 236 (446)
Q Consensus 174 vwd~~---~~~~~~~l~~------------h~~~v~sv~--~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~ 236 (446)
+||++ ++.....+.+ +...+.++. ++++++ +|++++.|+.|++||++++.++..+.
T Consensus 137 vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~------ 209 (437)
T 3gre_A 137 VLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LLVALTNLSRVIIFDIRTLERLQIIE------ 209 (437)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EEEEEETTSEEEEEETTTCCEEEEEE------
T ss_pred EEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EEEEEeCCCeEEEEeCCCCeeeEEEc------
Confidence 99995 5555444332 445566666 445665 57999999999999998765543331
Q ss_pred cCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEE
Q 013274 237 GRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLK 316 (446)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 316 (446)
...|.+.|++++
T Consensus 210 --------------------------------------------------------------------~~~h~~~v~~~~ 221 (437)
T 3gre_A 210 --------------------------------------------------------------------NSPRHGAVSSIC 221 (437)
T ss_dssp --------------------------------------------------------------------CCGGGCCEEEEE
T ss_pred --------------------------------------------------------------------cCCCCCceEEEE
Confidence 012677899999
Q ss_pred EccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee-cCCCeEEEE----cCCCcEEEEeCC-CceEEEEeecCceEE
Q 013274 317 VTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ-TSKPIQLAT----TQDPAVVFVPCM-TAVKAFDIWSGKTCL 390 (446)
Q Consensus 317 fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~~-~~~~~~d~~~~~~~~ 390 (446)
|+|++.+|++|+.|++|++||+.+++... ..... ......+++ ++++..+++++. ..+++||+.+++...
T Consensus 222 ~s~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~ 297 (437)
T 3gre_A 222 IDEECCVLILGTTRGIIDIWDIRFNVLIR----SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQY 297 (437)
T ss_dssp ECTTSCEEEEEETTSCEEEEETTTTEEEE----EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEE
T ss_pred ECCCCCEEEEEcCCCeEEEEEcCCccEEE----EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEE
Confidence 99999999999999999999999864321 11111 112334433 345657777765 469999999888777
Q ss_pred Eecc--------------------------cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCCCCcCCC
Q 013274 391 TFRG--------------------------HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHISDGVDAG 436 (446)
Q Consensus 391 ~l~g--------------------------H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~~~~~~~ 436 (446)
.+.+ |...|++++|+ ++++|+||+.|+.|++|++..........+
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 298 AFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp EEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEEC
T ss_pred EEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEec
Confidence 6654 56678899999 779999999999999999987765544444
No 99
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=1.7e-27 Score=230.45 Aligned_cols=268 Identities=14% Similarity=0.137 Sum_probs=209.4
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE-EEEeCCCeEEEEECCC
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF-VTGSYDHYVKVWDTNC 135 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l-~s~s~D~~i~iWd~~~ 135 (446)
.++++++.|++|++||+++++.. . ...+|. .+.++.++| +++++ ++++.|++|++||+.+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~------------~-----~~~~~~-~~~~~~~s~-dg~~l~~~~~~d~~i~v~d~~~ 63 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVT------------A-----TIPVGS-NPMGAVISP-DGTKVYVANAHSNDVSIIDTAT 63 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEE------------E-----EEECSS-SEEEEEECT-TSSEEEEEEGGGTEEEEEETTT
T ss_pred EEEEEcCCCCEEEEEECCCCeEE------------E-----EeecCC-CcceEEECC-CCCEEEEECCCCCeEEEEECCC
Confidence 57899999999999999865421 0 112343 477888887 66654 7888999999999999
Q ss_pred CeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcE
Q 013274 136 TRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215 (446)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I 215 (446)
++.+..+.....+..+++++.. ..++++++.++.|++||+++++....+..| ..+.+++|+|+++.++++++.|+.|
T Consensus 64 ~~~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v 140 (391)
T 1l0q_A 64 NNVIATVPAGSSPQGVAVSPDG--KQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTV 140 (391)
T ss_dssp TEEEEEEECSSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEE
T ss_pred CeEEEEEECCCCccceEECCCC--CEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEE
Confidence 9999888887788889998854 245567777899999999999888877755 4689999999998776899999999
Q ss_pred EEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccC
Q 013274 216 RFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLH 295 (446)
Q Consensus 216 ~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (446)
++||++++++...+.
T Consensus 141 ~~~d~~~~~~~~~~~----------------------------------------------------------------- 155 (391)
T 1l0q_A 141 SVINTVTKAVINTVS----------------------------------------------------------------- 155 (391)
T ss_dssp EEEETTTTEEEEEEE-----------------------------------------------------------------
T ss_pred EEEECCCCcEEEEEe-----------------------------------------------------------------
Confidence 999998765433221
Q ss_pred CCcccccccccccccCeEEEEEccCCCEE-EEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC
Q 013274 296 PGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC 374 (446)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (446)
. ...+.+++|+|+|++| ++++.|++|++||+.+++... ... ....+..+++++++..+++++
T Consensus 156 -----------~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~----~~~-~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 156 -----------V-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID----TVK-VEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp -----------C-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE----EEE-CSSEEEEEEECTTSSEEEEEE
T ss_pred -----------c-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE----EEe-cCCCccceEECCCCCEEEEEe
Confidence 1 1236789999999887 688889999999998864321 111 123445678899988877764
Q ss_pred ----CCceEEEEeecCceEEEecccccceEEEEEcCCCCEE-EEeeCCCcEEEeCCCCCC
Q 013274 375 ----MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQEL-YTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 375 ----~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~l-vtgs~D~~v~vW~~~~~~ 429 (446)
...+++||+.+++....+..|.. +.+++|+||+++| ++++.|+.|++|++.+..
T Consensus 219 ~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 219 VDKYFNTVSMIDTGTNKITARIPVGPD-PAGIAVTPDGKKVYVALSFXNTVSVIDTATNT 277 (391)
T ss_dssp ECSSCCEEEEEETTTTEEEEEEECCSS-EEEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cCcCCCcEEEEECCCCeEEEEEecCCC-ccEEEEccCCCEEEEEcCCCCEEEEEECCCCc
Confidence 46899999999998888888764 7999999999987 688999999999998543
No 100
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=3.3e-28 Score=233.38 Aligned_cols=245 Identities=13% Similarity=0.110 Sum_probs=197.4
Q ss_pred CccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe--eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR--VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 101 gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
.|...|.++.++| ++++|++++.|++|++||+.+++ .+..+. +.+.+..+++++. ..+|++++.|+.|++||+
T Consensus 6 ~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~~~~~dg~i~vwd~ 81 (372)
T 1k8k_C 6 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD---SNRIVTCGTDRNAYVWTL 81 (372)
T ss_dssp SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT---TTEEEEEETTSCEEEEEE
T ss_pred ccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC---CCEEEEEcCCCeEEEEEC
Confidence 4788899999987 78899999999999999999886 666665 4566888888874 458899999999999999
Q ss_pred CCCceee--eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 178 ASGAISQ--TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 178 ~~~~~~~--~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
+++.... .+.+|...|.++.|+|+++. |++++.|+.|++||++.........
T Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~d~~v~i~d~~~~~~~~~~~------------------------- 135 (372)
T 1k8k_C 82 KGRTWKPTLVILRINRAARCVRWAPNEKK-FAVGSGSRVISICYFEQENDWWVCK------------------------- 135 (372)
T ss_dssp ETTEEEEEEECCCCSSCEEEEEECTTSSE-EEEEETTSSEEEEEEETTTTEEEEE-------------------------
T ss_pred CCCeeeeeEEeecCCCceeEEEECCCCCE-EEEEeCCCEEEEEEecCCCcceeee-------------------------
Confidence 9886543 44789999999999999875 7899999999999987643111100
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEE
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRL 335 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~l 335 (446)
....+|...|.+++|+|++.+|++|+.|+.|++
T Consensus 136 -----------------------------------------------~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 136 -----------------------------------------------HIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp -----------------------------------------------EECTTCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -----------------------------------------------eeecccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 001246778999999999999999999999999
Q ss_pred EecCc------------------CceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccc
Q 013274 336 WDVES------------------GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHY 396 (446)
Q Consensus 336 Wd~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~ 396 (446)
||+.. ++. ...+..+......+++++++..+++++. ..+++||+.+++.+..+.+|.
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGEL----MFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCE----EEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred EEcccccccccccccccccccchhhh----eEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 99642 211 1111122344567888999888877654 579999999999999999999
Q ss_pred cceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 397 EYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 397 ~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
..|++++|+|++++|++| .|+.|++|++..
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 999999999999999888 899999999876
No 101
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=1.1e-29 Score=239.33 Aligned_cols=211 Identities=21% Similarity=0.302 Sum_probs=159.1
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCee--eEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRV--VMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vw 175 (446)
..+|...|.++.|+| ++++|||||.|++|++||+.++.. +..+. +.+.+..+++++.. +..+|++|+.|+.|++|
T Consensus 9 ~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~-~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPM-YGNILASCSYDRKVIIW 86 (316)
T ss_dssp -----CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGG-GSSCEEEEETTSCEEEE
T ss_pred cccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCC-CCCEEEEEECCCEEEEE
Confidence 358999999999987 788999999999999999987753 34443 45668888887531 23579999999999999
Q ss_pred eCCCCc--eeeeeeCCCCCeEEEEEecC--CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 176 DIASGA--ISQTLSGHRDGIMTVEWSTS--SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 176 d~~~~~--~~~~l~~h~~~v~sv~~s~~--~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|++++. ....+.+|.+.|.+++|+|+ +. +|++|+.|++|++||++.........
T Consensus 87 d~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~~~--------------------- 144 (316)
T 3bg1_A 87 REENGTWEKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWEVKK--------------------- 144 (316)
T ss_dssp CCSSSCCCEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEEECC---------------------
T ss_pred ECCCCcceEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcceee---------------------
Confidence 999874 56678899999999999997 44 57999999999999987542111000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC-----------
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED----------- 320 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d----------- 320 (446)
...+|...|.+++|+|+
T Consensus 145 ----------------------------------------------------~~~~h~~~v~~~~~~~~~~~~~~~~~~~ 172 (316)
T 3bg1_A 145 ----------------------------------------------------INNAHTIGCNAVSWAPAVVPGSLIDHPS 172 (316)
T ss_dssp ----------------------------------------------------BTTSSSSCBCCCEECCCCCC------CC
T ss_pred ----------------------------------------------------eeccccCCcceEEEccccCCcccccccc
Confidence 01234445555666655
Q ss_pred ------CCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecc
Q 013274 321 ------GMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG 394 (446)
Q Consensus 321 ------g~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~g 394 (446)
+++|++|+.|++|++||+..... .+...+|.+
T Consensus 173 ~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------------------------------------------~~~~~~l~~ 210 (316)
T 3bg1_A 173 GQKPNYIKRFASGGCDNLIKLWKEEEDGQ------------------------------------------WKEEQKLEA 210 (316)
T ss_dssp SCCCCCCCBEECCBTTSBCCEEEECTTSC------------------------------------------EEEEECCBC
T ss_pred ccCccccceEEEecCCCeEEEEEeCCCCc------------------------------------------cceeeeccc
Confidence 57899999999999999864311 011235678
Q ss_pred cccceEEEEEcCCC----CEEEEeeCCCcEEEeCCCC
Q 013274 395 HYEYVNCCCFSSQD----QELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 395 H~~~v~~~~fSpd~----~~lvtgs~D~~v~vW~~~~ 427 (446)
|.+.|.+++|+|++ ++|+|||.|++|+||+++.
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 99999999999997 8899999999999998865
No 102
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.5e-27 Score=234.20 Aligned_cols=283 Identities=12% Similarity=0.085 Sum_probs=217.8
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
..+.+++|+| ++.++++++.|++|++||++++... .........+|...|.++.+.+ ++.++++++
T Consensus 123 ~~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~------------~~~~~~~~~~~~~~v~~~~~~~-~~~~~~s~~ 188 (433)
T 3bws_A 123 FQPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTV------------RLSPPEKYKKKLGFVETISIPE-HNELWVSQM 188 (433)
T ss_dssp SCBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEE------------EECCCHHHHTTCCEEEEEEEGG-GTEEEEEEG
T ss_pred CCceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEe------------eecCcccccccCCceeEEEEcC-CCEEEEEEC
Confidence 4567999998 7888999999999999999875421 0111112347888999988855 788999999
Q ss_pred CCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~ 202 (446)
.|++|++||+++++.+..+.. ...+..+++++.. ..++++++.|+.|++||+++++....+..+ ..+.+++|+|++
T Consensus 189 ~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g 265 (433)
T 3bws_A 189 QANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIR--DLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDG 265 (433)
T ss_dssp GGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTT--TEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTS
T ss_pred CCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCC--CEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCC
Confidence 999999999999888877763 3457778888753 345567778999999999999888877764 458999999999
Q ss_pred CeEEEEee--------CCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 203 EWILVTGG--------CDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 203 ~~~l~S~s--------~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
+.+ ++++ .|+.|++||+++++....+
T Consensus 266 ~~l-~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~--------------------------------------------- 299 (433)
T 3bws_A 266 KEL-YIAQFSASNQESGGGRLGIYSMDKEKLIDTI--------------------------------------------- 299 (433)
T ss_dssp SEE-EEEEEESCTTCSCCEEEEEEETTTTEEEEEE---------------------------------------------
T ss_pred CEE-EEEECCCCccccCCCeEEEEECCCCcEEeec---------------------------------------------
Confidence 864 5555 5889999999865432211
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE-EEEeecCCcEEEEecCcCceeeeeeeEEEe
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY-LLSAGSDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~-l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
.|.+.+.+++|+|+|++ +++++.|++|++||+.+++... ...
T Consensus 300 --------------------------------~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~----~~~- 342 (433)
T 3bws_A 300 --------------------------------GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQK----SIP- 342 (433)
T ss_dssp --------------------------------EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEE----EEE-
T ss_pred --------------------------------cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEE----Eec-
Confidence 23345788999999975 5777999999999998765321 111
Q ss_pred ecCCCeEEEEcCCCcEEEEeCCC----------------ceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeC-
Q 013274 354 QTSKPIQLATTQDPAVVFVPCMT----------------AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN- 416 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~- 416 (446)
....+..+++++++..+++++.. .+.+||+.+++....+.++ ..+.+++|+||+++|++++.
T Consensus 343 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 421 (433)
T 3bws_A 343 VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAG-NQPTGLDVSPDNRYLVISDFL 421 (433)
T ss_dssp CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECS-SSEEEEEECTTSCEEEEEETT
T ss_pred CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCC-CCCceEEEcCCCCEEEEEECC
Confidence 23445678899999877776542 7999999999988888874 57899999999999987765
Q ss_pred CCcEEEeCCCC
Q 013274 417 DRQILVWCPSR 427 (446)
Q Consensus 417 D~~v~vW~~~~ 427 (446)
|++|++|+++.
T Consensus 422 d~~i~v~~~~~ 432 (433)
T 3bws_A 422 DHQIRVYRRDG 432 (433)
T ss_dssp TTEEEEEEETT
T ss_pred CCeEEEEEecC
Confidence 99999998763
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.5e-28 Score=236.67 Aligned_cols=260 Identities=16% Similarity=0.264 Sum_probs=198.1
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|++++|+|.++++|++|+.||+|+|||+.++..... ....+ ....+|...|.++.|+|....
T Consensus 76 ~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~-----~~~~~-----~~~~~h~~~v~~~~~~p~~~~ 145 (402)
T 2aq5_A 76 LVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLP-----LREPV-----ITLEGHTKRVGIVAWHPTAQN 145 (402)
T ss_dssp CBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSC-----BCSCS-----EEEECCSSCEEEEEECSSBTT
T ss_pred eEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccc-----cCCce-----EEecCCCCeEEEEEECcCCCC
Confidence 35689999999999975688999999999999999987532110 00111 123589999999999984447
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEe---cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee-eCCCCC-
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFK---MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL-SGHRDG- 192 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l-~~h~~~- 192 (446)
+|++++.|++|++||+.+++.+..+. +.+.+.++++++. ..+|++++.|+.|++||+++++.+..+ .+|.+.
T Consensus 146 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 146 VLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRD---GALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR 222 (402)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTT---SSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSS
T ss_pred EEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCC---CCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCc
Confidence 99999999999999999999888773 4566888898874 357899999999999999999998888 788876
Q ss_pred eEEEEEecCCCeEEEEe---eCCCcEEEEEccCCce-eEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 193 IMTVEWSTSSEWILVTG---GCDGAIRFWDIRRAGC-FRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~---s~Dg~I~iWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
+.++.|+|+++ +|++| +.|+.|++||+++... ....
T Consensus 223 ~~~~~~~~~~~-~l~~g~~~~~d~~i~iwd~~~~~~~~~~~--------------------------------------- 262 (402)
T 2aq5_A 223 PVHAVFVSEGK-ILTTGFSRMSERQVALWDTKHLEEPLSLQ--------------------------------------- 262 (402)
T ss_dssp CCEEEECSTTE-EEEEEECTTCCEEEEEEETTBCSSCSEEE---------------------------------------
T ss_pred ceEEEEcCCCc-EEEEeccCCCCceEEEEcCccccCCceEE---------------------------------------
Confidence 89999999976 57788 7899999999976421 0000
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEE-EeecCCcEEEEecCcCceeeee
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL-SAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~-sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
...|...+.+++|+|+|.+|+ +|+.|+.|++||+.+++.....
T Consensus 263 ------------------------------------~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 263 ------------------------------------ELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHY 306 (402)
T ss_dssp ------------------------------------ECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEE
T ss_pred ------------------------------------eccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEe
Confidence 012445689999999999986 5667999999999987632222
Q ss_pred eeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCce
Q 013274 348 FETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKT 388 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 388 (446)
+.... .......++++|++..+++ ....+++|++.+++.
T Consensus 307 l~~~~-~~~~v~~~~~sp~~~~~~s-~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 307 LSMFS-SKESQRGMGYMPKRGLEVN-KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEC-CSSCCSEEEECCGGGSCGG-GTEEEEEEEEETTEE
T ss_pred ecccc-cCCcccceEEeccccccee-cceeEEEEEcCCCcE
Confidence 22221 2345667888888776654 344789999987654
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.7e-28 Score=232.82 Aligned_cols=252 Identities=17% Similarity=0.155 Sum_probs=195.1
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe----eeEEEecCCceEEeeeccCCCCce-EEEEeeCCCcEEE
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR----VVMNFKMPGKVYRTAMSPLAASHM-LIAAGTEDVQVRL 174 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~-~lasgs~d~~v~v 174 (446)
.+|...|.++.|+| ++.+|++++.|++|++||+.++. ......+.+.+.++++++. .. +|++|+.|+.|++
T Consensus 8 ~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 8 QAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN---TDLQIYVGTVQGEILK 83 (342)
T ss_dssp SCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES---SSEEEEEEETTSCEEE
T ss_pred cCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC---CCcEEEEEcCCCeEEE
Confidence 48999999999987 78899999999999999998877 5555566677888888874 46 7899999999999
Q ss_pred EeC-CCCceeeeeeC--CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 175 CDI-ASGAISQTLSG--HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 175 wd~-~~~~~~~~l~~--h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
||+ +++.. ..+.+ |...|.+++|+| ++ .|++++.|+.|++||+++...-....
T Consensus 84 wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~--------------------- 139 (342)
T 1yfq_A 84 VDLIGSPSF-QALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAV--------------------- 139 (342)
T ss_dssp ECSSSSSSE-EECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEE---------------------
T ss_pred EEeccCCce-EeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccc---------------------
Confidence 999 87754 67788 999999999999 66 47899999999999986410000000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
.+. .. ....|.+.|.+++|+|++ |++++.|+
T Consensus 140 -----------------------------------~~~-----------~~-~~~~~~~~v~~~~~~~~~--l~~~~~d~ 170 (342)
T 1yfq_A 140 -----------------------------------KNL-----------NS-NNTKVKNKIFTMDTNSSR--LIVGMNNS 170 (342)
T ss_dssp -----------------------------------EES-----------CS-SSSSSCCCEEEEEECSSE--EEEEESTT
T ss_pred -----------------------------------cCC-----------ee-eEEeeCCceEEEEecCCc--EEEEeCCC
Confidence 000 00 001256779999999988 88999999
Q ss_pred cEEEEecCc-CceeeeeeeEEEeecCCCeEEEEcC-CCcEEEEeCC-CceEEEEeecC------ceEEEeccccc-----
Q 013274 332 RIRLWDVES-GRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPCM-TAVKAFDIWSG------KTCLTFRGHYE----- 397 (446)
Q Consensus 332 ~i~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~d~~~~------~~~~~l~gH~~----- 397 (446)
.|++||+.+ +....... ..........+++.+ ++..+++++. ..+++|++... +....+.+|..
T Consensus 171 ~i~i~d~~~~~~~~~~~~--~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (342)
T 1yfq_A 171 QVQWFRLPLCEDDNGTIE--ESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDT 248 (342)
T ss_dssp EEEEEESSCCTTCCCEEE--ECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCC
T ss_pred eEEEEECCccccccceee--ecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccc
Confidence 999999987 54321111 111223455678888 8877777654 58999999877 77788988866
Q ss_pred ----ceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 398 ----YVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 398 ----~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
.|++++|+|++++|++|+.|+.|++|++.....
T Consensus 249 ~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~ 285 (342)
T 1yfq_A 249 NLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKK 285 (342)
T ss_dssp SSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhH
Confidence 999999999999999999999999999986643
No 105
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.2e-27 Score=221.87 Aligned_cols=240 Identities=19% Similarity=0.303 Sum_probs=192.0
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
..+|...|.++.+ + ++.+|++++.|++|++||+.++.....+. +.+.+.++++++. ..++++++.|+.|++|++
T Consensus 14 l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 14 LKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSE---KELLLFGGKDTMINGVPL 88 (313)
T ss_dssp ECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETT---TTEEEEEETTSCEEEEET
T ss_pred hhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCC---CCEEEEecCCCeEEEEEe
Confidence 4689999999988 5 67899999999999999998887766554 4566888888874 458999999999999998
Q ss_pred CCC---ceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccc
Q 013274 178 ASG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254 (446)
Q Consensus 178 ~~~---~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (446)
... .....+.+|...|.++.|+ ++ .+++++.||.|++||. ......
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~~--~~-~l~~~~~d~~i~~~d~--~~~~~~-------------------------- 137 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSFQ--DG-VVISGSWDKTAKVWKE--GSLVYN-------------------------- 137 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEEE--TT-EEEEEETTSEEEEEET--TEEEEE--------------------------
T ss_pred eecCCCCcccchhhcccCEEEEEec--CC-EEEEEeCCCCEEEEcC--CcEEEe--------------------------
Confidence 765 5577889999999999994 34 5789999999999992 221111
Q ss_pred cCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecCCcE
Q 013274 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSDSRI 333 (446)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D~~i 333 (446)
...|..++.++.|+| ++.+|++++.|+.|
T Consensus 138 --------------------------------------------------~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 138 --------------------------------------------------LQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp --------------------------------------------------EECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred --------------------------------------------------cccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 124667799999988 99999999999999
Q ss_pred EEEecCcCceeeeeeeEEEe-ecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 334 RLWDVESGRNTLVNFETVRL-QTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 334 ~lWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
++||..... ..... .......+++.+++.++.......+++||+.+++.+..+.+|.+.|++++|+|++ .|+
T Consensus 168 ~i~d~~~~~------~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~ 240 (313)
T 3odt_A 168 KLWQNDKVI------KTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIV 240 (313)
T ss_dssp EEEETTEEE------EEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEE
T ss_pred EEEecCceE------EEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEE
Confidence 999944321 11111 2334556788888885555566789999999999999999999999999999999 689
Q ss_pred EeeCCCcEEEeCCCCCCCC
Q 013274 413 TGGNDRQILVWCPSRHISD 431 (446)
Q Consensus 413 tgs~D~~v~vW~~~~~~~~ 431 (446)
+|+.|+.|++|++......
T Consensus 241 ~~~~dg~v~iwd~~~~~~~ 259 (313)
T 3odt_A 241 SCGEDRTVRIWSKENGSLK 259 (313)
T ss_dssp EEETTSEEEEECTTTCCEE
T ss_pred EEecCCEEEEEECCCCcee
Confidence 9999999999999866533
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=1.8e-28 Score=241.31 Aligned_cols=268 Identities=14% Similarity=0.086 Sum_probs=184.7
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
+.+|.+.|++|+|+|.++.+|+|||.||+|+|||+++.... .. .....+...+.++.+++ ++.+
T Consensus 160 ~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~-------------~~--~~~~~~~~~~~~~~~~~-~~~~ 223 (435)
T 4e54_B 160 GIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILR-------------VF--ASSDTINIWFCSLDVSA-SSRM 223 (435)
T ss_dssp CCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEE-------------EE--ECCSSCSCCCCCEEEET-TTTE
T ss_pred ccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCcee-------------EE--eccCCCCccEEEEEECC-CCCE
Confidence 35899999999999877889999999999999998753210 00 11124455667777776 7889
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee---eeeCCCCCeE
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ---TLSGHRDGIM 194 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~---~l~~h~~~v~ 194 (446)
|++|+.|++|++||+.... +..+. +.+.+.++++++.. ..++++|+.|+.|++||+++..... ...+|...|.
T Consensus 224 l~~g~~dg~i~~wd~~~~~-~~~~~~h~~~v~~v~~~p~~--~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~ 300 (435)
T 4e54_B 224 VVTGDNVGNVILLNMDGKE-LWNLRMHKKKVTHVALNPCC--DWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVN 300 (435)
T ss_dssp EEEECSSSBEEEEESSSCB-CCCSBCCSSCEEEEEECTTC--SSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEE
T ss_pred EEEEeCCCcEeeeccCcce-eEEEecccceEEeeeecCCC--ceEEEEecCcceeeEEecccccccceEEEeeecccccc
Confidence 9999999999999997543 33333 45668889998754 3588999999999999998875433 3468999999
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
+++|+|++++ |+|++.||+|++||++++.+...+...........
T Consensus 301 ~~~~spdg~~-l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~---------------------------------- 345 (435)
T 4e54_B 301 AACFSPDGAR-LLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHL---------------------------------- 345 (435)
T ss_dssp ECCBCTTSSE-EEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSS----------------------------------
T ss_pred ceeECCCCCe-eEEEcCCCEEEEEECCCCccceEEecccccccccc----------------------------------
Confidence 9999999985 78999999999999998766544422111000000
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe-ecCCcEEEEecCcCceeeeeeeEEEe
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA-GSDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg-s~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
..+.. .....+.+..+.+++++..++.+ ..++.|++||+.+++...... ..
T Consensus 346 -------------~~~~~------------~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~---~~ 397 (435)
T 4e54_B 346 -------------TPIKA------------AWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLY---DP 397 (435)
T ss_dssp -------------CCCBC------------EECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEEC---CS
T ss_pred -------------eeEEE------------EEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEe---CC
Confidence 00000 00012335566778887765544 455689999999876422111 11
Q ss_pred ecCCCeE-EEEcCCCcEEEEeCCCceEEEEeecCce
Q 013274 354 QTSKPIQ-LATTQDPAVVFVPCMTAVKAFDIWSGKT 388 (446)
Q Consensus 354 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 388 (446)
+...... .+++|++.+++++.++.+++|++.+++.
T Consensus 398 ~~~~v~s~~~fspdg~~lasg~d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 398 ESSGISSLNEFNPMGDTLASAMGYHILIWSQQEART 433 (435)
T ss_dssp SCCCCCCEEEECTTSSCEEEECSSEEEECCCC----
T ss_pred CCCcEEEEEEECCCCCEEEEEcCCcEEEEECCcCee
Confidence 1222333 4689999999998888999999988765
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=234.04 Aligned_cols=228 Identities=11% Similarity=0.130 Sum_probs=173.9
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC---------CCceeee
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA---------SGAISQT 185 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~---------~~~~~~~ 185 (446)
++.+++||+.|++|++||+.+++.+..+. .+.+..+.+++. +++++.|+.|++|+.+ ++..+..
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~------~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~ 119 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA------IISRGPCNRLLLLYPGNQITILDSKTNKVLRE 119 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS------EEEECSTTEEEEEETTTEEEEEETTTCCEEEE
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc------eEEecCCCeEEEEEccCceEEeecCCcceeEE
Confidence 56799999999999999999998887766 223444444442 8899999999999665 5554544
Q ss_pred ee-CCCCCeEEEEEec--CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcC
Q 013274 186 LS-GHRDGIMTVEWST--SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVK 262 (446)
Q Consensus 186 l~-~h~~~v~sv~~s~--~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (446)
+. +|.+.|.+++|+| ++++ +++++.||+|++||++++.++..+.
T Consensus 120 ~~~~~~~~v~~~~~~~~~~~~~-l~s~s~dg~i~~wd~~~~~~~~~~~-------------------------------- 166 (343)
T 3lrv_A 120 IEVDSANEIIYMYGHNEVNTEY-FIWADNRGTIGFQSYEDDSQYIVHS-------------------------------- 166 (343)
T ss_dssp EECCCSSCEEEEECCC---CCE-EEEEETTCCEEEEESSSSCEEEEEC--------------------------------
T ss_pred eecCCCCCEEEEEcCCCCCCCE-EEEEeCCCcEEEEECCCCcEEEEEe--------------------------------
Confidence 44 7888999999999 8875 7899999999999998765432210
Q ss_pred CCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCc
Q 013274 263 PRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGR 342 (446)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~ 342 (446)
..|...|++++|+|+|.+|++|+.|++|++||+.+++
T Consensus 167 -------------------------------------------~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~ 203 (343)
T 3lrv_A 167 -------------------------------------------AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPD 203 (343)
T ss_dssp -------------------------------------------CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTT
T ss_pred -------------------------------------------cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCC
Confidence 1233458999999999999999999999999999876
Q ss_pred eeeeeeeEEEe-ecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecc---cccceE--EEEEcCCCCEEEEeeC
Q 013274 343 NTLVNFETVRL-QTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG---HYEYVN--CCCFSSQDQELYTGGN 416 (446)
Q Consensus 343 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~g---H~~~v~--~~~fSpd~~~lvtgs~ 416 (446)
.....+ .. +......++++|++..+++++.+.+++||+.+++....+.. |...+. +++|+|++++|++|+.
T Consensus 204 ~~~~~~---~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~ 280 (343)
T 3lrv_A 204 QASSRF---PVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSN 280 (343)
T ss_dssp SCCEEC---CCCTTSCEEEEEECTTSSEEEEEESSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEET
T ss_pred CCccEE---eccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecC
Confidence 431222 22 34556778999999999988878999999988876554443 555554 6999999999999999
Q ss_pred -CCcEEEeCCCCC
Q 013274 417 -DRQILVWCPSRH 428 (446)
Q Consensus 417 -D~~v~vW~~~~~ 428 (446)
|+.|+||+.+..
T Consensus 281 ~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 281 ESNSLTIYKFDKK 293 (343)
T ss_dssp TTTEEEEEEECTT
T ss_pred CCCcEEEEEEccc
Confidence 999999988644
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.8e-29 Score=245.76 Aligned_cols=245 Identities=11% Similarity=0.084 Sum_probs=185.8
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCcc-----ccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHK-----YAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-----~~V~~~~~~~~~ 115 (446)
+|...|.+++||| +|..||+++.||+|+|||.+.. +. ... |. ..|.+++|+| +
T Consensus 83 ~~~~~V~~vawSP-dG~~LAs~s~dg~V~iwd~~~~---------------l~----~l~-~~~~~~~~sv~svafSP-D 140 (588)
T 2j04_A 83 QPVCYPRVCKPSP-IDDWMAVLSNNGNVSVFKDNKM---------------LT----NLD-SKGNLSSRTYHCFEWNP-I 140 (588)
T ss_dssp SCSCCEEEEEECS-SSSCEEEEETTSCEEEEETTEE---------------EE----ECC-CSSCSTTTCEEEEEECS-S
T ss_pred CCCCcEEEEEECC-CCCEEEEEeCCCcEEEEeCCce---------------ee----ecc-CCCccccccEEEEEEcC-C
Confidence 7789999999997 6889999999999999996430 00 011 22 3588999987 8
Q ss_pred CcEEEEEeCCCeEEEEECCCCee-------eEEEec-----CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce-
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRV-------VMNFKM-----PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI- 182 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~-------~~~~~~-----~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~- 182 (446)
+++||+|+.||+|++||+.++.. +.++.. .+.+.+++++|+ + +++++.|+.|++||+.++..
T Consensus 141 G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPd---g--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 141 ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYED---V--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETT---E--EEEEETTCCEEEECCCSSSSC
T ss_pred CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCC---c--EEEEeCCCeEEEEECCCCccc
Confidence 99999999999999999998753 455432 246899999984 3 67888899999999988874
Q ss_pred --eeee-eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 183 --SQTL-SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 183 --~~~l-~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
.+++ .+|...|.+|+|+ ++ .+|+++ |++|++||+.++.....
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~------------------------------- 260 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSL------------------------------- 260 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEE-------------------------------
T ss_pred cceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEE-------------------------------
Confidence 3567 4899999999999 45 467776 79999999876432100
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEE--ccCCCEEEEeecCCcEEEEe
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKV--TEDGMYLLSAGSDSRIRLWD 337 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~f--s~dg~~l~sgs~D~~i~lWd 337 (446)
..+|.+.|..++| +||+..|++++.||+ |+|.
T Consensus 261 ---------------------------------------------~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~ 294 (588)
T 2j04_A 261 ---------------------------------------------KTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLL 294 (588)
T ss_dssp ---------------------------------------------ECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEE
T ss_pred ---------------------------------------------EcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEe
Confidence 1257788999999 999999999999999 9998
Q ss_pred cCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeC
Q 013274 338 VESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGN 416 (446)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~ 416 (446)
... +.++|++.+++.. ...+++|+...+ ....+.+ ...|.+++|||||+.||+++.
T Consensus 295 ~d~--------------------~~~spd~~l~a~~-d~~v~lW~~~g~-~l~~~~~-~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 295 EDE--------------------LHVTADNIIAPYL-EKKFKKWSTIWN-EFNNYET-TLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp SSS--------------------EEEECCCSSHHHH-HHHHHHTTTTTT-SSSSSCC-EEEEEEEEECTTSSEEEEEEE
T ss_pred ecc--------------------EEECCCceEEEEc-CCEEEEEECCCC-ceeeecc-ceEEEEEEECCCCCEEEEEEe
Confidence 651 2244555444332 346777765333 3445555 778999999999999999874
No 109
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-27 Score=225.40 Aligned_cols=257 Identities=15% Similarity=0.248 Sum_probs=204.3
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
..+|...|+++.++| ++++|++++.|+.|++||+.+++.+..+. +.+.+.++++++. ..+|++++.|+.|++||+
T Consensus 28 l~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~i~iwd~ 103 (369)
T 3zwl_B 28 LTGHERPLTQVKYNK-EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF---TKYCVTGSADYSIKLWDV 103 (369)
T ss_dssp EECCSSCEEEEEECT-TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT---SSEEEEEETTTEEEEEET
T ss_pred EEEeeceEEEEEEcC-CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC---CCEEEEEeCCCeEEEEEC
Confidence 358999999999987 78899999999999999999999888776 4566888888874 458899999999999999
Q ss_pred CCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCC-----CcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 178 ASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCD-----GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 178 ~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D-----g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
++++.+..+. |...|.++.|+|+++. +++++.+ +.|++||++.......+.....
T Consensus 104 ~~~~~~~~~~-~~~~v~~~~~~~~~~~-l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~------------------ 163 (369)
T 3zwl_B 104 SNGQCVATWK-SPVPVKRVEFSPCGNY-FLAILDNVMKNPGSINIYEIERDSATHELTKVSE------------------ 163 (369)
T ss_dssp TTCCEEEEEE-CSSCEEEEEECTTSSE-EEEEECCBTTBCCEEEEEEEEECTTTCCEEEECS------------------
T ss_pred CCCcEEEEee-cCCCeEEEEEccCCCE-EEEecCCccCCCCEEEEEEecCCccceeeccccc------------------
Confidence 9999888887 8899999999999985 6788888 9999999875432111100000
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccccccccc--CeEEEEEccCCCEEEEeecC
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYG--AVTGLKVTEDGMYLLSAGSD 330 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~fs~dg~~l~sgs~D 330 (446)
........|.+ .+.+++|+|++++|++++.|
T Consensus 164 -----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 196 (369)
T 3zwl_B 164 -----------------------------------------------EPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD 196 (369)
T ss_dssp -----------------------------------------------SCSEEEECCTTCCCEEEEEECGGGCEEEEEETT
T ss_pred -----------------------------------------------ceeeeccCCcCccceeEEEEcCCCCEEEEEcCC
Confidence 00001123344 79999999999999999999
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCC
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ 409 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~ 409 (446)
+.|++||+.+..... .....+......+++++++..+++++ ...+++||+.+++....+. |...+.+++|+|+++
T Consensus 197 g~i~i~d~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~ 272 (369)
T 3zwl_B 197 GKISKYDVSNNYEYV---DSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKE 272 (369)
T ss_dssp SEEEEEETTTTTEEE---EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred CEEEEEECCCCcEeE---EEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCc
Confidence 999999998733222 22223344566788999998887765 4689999999999888887 888999999999999
Q ss_pred EEEEeeCCC--------------cEEEeCCCCCCC
Q 013274 410 ELYTGGNDR--------------QILVWCPSRHIS 430 (446)
Q Consensus 410 ~lvtgs~D~--------------~v~vW~~~~~~~ 430 (446)
+|++++.++ .+++|+......
T Consensus 273 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 273 FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp EEEEEECCC-------------CEEEEEETTTCCE
T ss_pred eEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 999999998 899999876543
No 110
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=6.4e-28 Score=231.84 Aligned_cols=201 Identities=13% Similarity=0.140 Sum_probs=155.1
Q ss_pred CCccceeEEEeecCCCCEEE--EeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 41 PHKGSINSLQVDLTEERYLL--SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~--s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
.+...+.+++||| +|++|+ |++.|++|+|||++++... .. ..|...|.++.|+| ++++
T Consensus 131 ~~~~~~~~v~fSp-Dg~~la~as~~~d~~i~iwd~~~~~~~------------~~------~~~~~~V~~v~fsp-dg~~ 190 (365)
T 4h5i_A 131 NADDYTKLVYISR-EGTVAAIASSKVPAIMRIIDPSDLTEK------------FE------IETRGEVKDLHFST-DGKV 190 (365)
T ss_dssp CTTCCEEEEEECT-TSSCEEEEESCSSCEEEEEETTTTEEE------------EE------EECSSCCCEEEECT-TSSE
T ss_pred CcccCEEEEEEcC-CCCEEEEEECCCCCEEEEeECCCCcEE------------EE------eCCCCceEEEEEcc-CCce
Confidence 3456789999997 577765 5557999999999865421 11 14667899999987 8899
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEec---CCceEEeeeccCCCCceEEEEeeCCC----cEEEEeCCCCce----eeeee
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKM---PGKVYRTAMSPLAASHMLIAAGTEDV----QVRLCDIASGAI----SQTLS 187 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lasgs~d~----~v~vwd~~~~~~----~~~l~ 187 (446)
+++++.| .+++|+..++..+..... ...+.+++|+|+ ..++++++.|+ .+++||+..... ...+.
T Consensus 191 l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspd---g~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~ 266 (365)
T 4h5i_A 191 VAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIAD---DTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT 266 (365)
T ss_dssp EEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEET---TEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE
T ss_pred EEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCC---CCEEEEEecCCcceeEEeecccccceecceeeeeec
Confidence 9999866 566666666665543332 334677788774 45788887776 688999877643 35678
Q ss_pred CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 188 GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 188 ~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
+|...|++++|+|++++ ||+|+.|++|+|||++++++++.+
T Consensus 267 ~~~~~V~~~~~Spdg~~-lasgs~D~~V~iwd~~~~~~~~~~-------------------------------------- 307 (365)
T 4h5i_A 267 NRFKGITSMDVDMKGEL-AVLASNDNSIALVKLKDLSMSKIF-------------------------------------- 307 (365)
T ss_dssp SSCSCEEEEEECTTSCE-EEEEETTSCEEEEETTTTEEEEEE--------------------------------------
T ss_pred CCCCCeEeEEECCCCCc-eEEEcCCCEEEEEECCCCcEEEEe--------------------------------------
Confidence 99999999999999985 799999999999999877654322
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~ 341 (446)
..+|.++|++|+|+|||++|||||.|++|||||+...
T Consensus 308 -------------------------------------~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 308 -------------------------------------KQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp -------------------------------------TTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred -------------------------------------cCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 1378899999999999999999999999999999753
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=1.3e-26 Score=226.97 Aligned_cols=261 Identities=19% Similarity=0.293 Sum_probs=190.1
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|...|++|+|+| ++++|++|+.||+|+|||++++... ....+|...|.++.+ ++.+|
T Consensus 144 ~~~~~~V~sv~fsp-dg~~lasgs~Dg~v~iWd~~~~~~~-----------------~~~~~h~~~v~~~s~---~~~~l 202 (420)
T 4gga_A 144 EQPGEYISSVAWIK-EGNYLAVGTSSAEVQLWDVQQQKRL-----------------RNMTSHSARVGSLSW---NSYIL 202 (420)
T ss_dssp CSTTCCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEE---ETTEE
T ss_pred cCCCCcEEEEEECC-CCCEEEEEECCCeEEEEEcCCCcEE-----------------EEEeCCCCceEEEee---CCCEE
Confidence 47888999999997 6889999999999999999875421 123578888887765 46799
Q ss_pred EEEeCCCeEEEEECCCCe-eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc----eeeeeeCCCCCe
Q 013274 120 VTGSYDHYVKVWDTNCTR-VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA----ISQTLSGHRDGI 193 (446)
Q Consensus 120 ~s~s~D~~i~iWd~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~----~~~~l~~h~~~v 193 (446)
++|+.|+++++||..... .+..+. +...+..+.+.+. ..++++++.|+.|++||..++. .+.....|.+.|
T Consensus 203 ~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~---g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V 279 (420)
T 4gga_A 203 SSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD---GRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAV 279 (420)
T ss_dssp EEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT---SSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCE
T ss_pred EEEeCCCceeEeeecccceeeEEecccccceeeeeecCC---CCeeeeeeccccceEEeeccccccceeeeeecccCCce
Confidence 999999999999987643 333343 3445666666664 4589999999999999998775 345677899999
Q ss_pred EEEEEecCCCeEEEE--eeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccccc
Q 013274 194 MTVEWSTSSEWILVT--GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S--~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (446)
.+++|+|.+..++++ |+.|++|++||++++.+...+.
T Consensus 280 ~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~----------------------------------------- 318 (420)
T 4gga_A 280 KAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD----------------------------------------- 318 (420)
T ss_dssp EEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE-----------------------------------------
T ss_pred eeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec-----------------------------------------
Confidence 999999988877665 4579999999998876543321
Q ss_pred CCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee--cCCcEEEEecCcCceeeeeee
Q 013274 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG--SDSRIRLWDVESGRNTLVNFE 349 (446)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs--~D~~i~lWd~~~~~~~~~~~~ 349 (446)
+...+.++.|+|++..+++++ .|++|+|||+.+++.. .
T Consensus 319 ------------------------------------~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v----~ 358 (420)
T 4gga_A 319 ------------------------------------AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKV----A 358 (420)
T ss_dssp ------------------------------------CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEE----E
T ss_pred ------------------------------------cccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEE----E
Confidence 123488899999999988765 7999999999987532 2
Q ss_pred EEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEc
Q 013274 350 TVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFS 405 (446)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fS 405 (446)
.+..+...+..++++|++.++++++. ..+++||+.+....+....|...+....|.
T Consensus 359 ~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~ 415 (420)
T 4gga_A 359 ELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLI 415 (420)
T ss_dssp EECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----------------
T ss_pred EEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccC
Confidence 33334556677899999998888765 579999998877766666666655444443
No 112
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=1.9e-26 Score=218.30 Aligned_cols=246 Identities=17% Similarity=0.307 Sum_probs=195.8
Q ss_pred cccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe-----eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCc
Q 013274 98 HEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-----VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQ 171 (446)
Q Consensus 98 ~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~ 171 (446)
++.||.+.|+++.|+|.++++|+|||.|++|+|||+.+.+ +...+. +.+.+.++.+++. ..+|++++.|+.
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~d---g~~l~s~~~d~~ 109 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSD---GQFALSGSWDGT 109 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTT---SSEEEEEETTSE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCC---CCEEEEEccccc
Confidence 4579999999999998668899999999999999987654 233333 3456788888874 458999999999
Q ss_pred EEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 172 VRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 172 v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|++|+...+........+...+..+.++++++. |++++.|+.+++||++.......
T Consensus 110 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~s~s~d~~~~~~d~~~~~~~~~----------------------- 165 (340)
T 4aow_A 110 LRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQ-IVSGSRDKTIKLWNTLGVCKYTV----------------------- 165 (340)
T ss_dssp EEEEETTTTEEEEEEECCSSCEEEEEECTTSSC-EEEEETTSCEEEECTTSCEEEEE-----------------------
T ss_pred ceEEeecccceeeeecCCCCceeEEEEeecCcc-ceeecCCCeEEEEEeCCCceEEE-----------------------
Confidence 999999999888888889999999999999875 78999999999999865321100
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCC--CEEEEeec
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG--MYLLSAGS 329 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg--~~l~sgs~ 329 (446)
...+|...+..++|++++ .++++++.
T Consensus 166 ----------------------------------------------------~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 166 ----------------------------------------------------QDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ----------------------------------------------------CSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred ----------------------------------------------------EeccccCcccceEEccCCCCcEEEEEcC
Confidence 013566779999998875 57899999
Q ss_pred CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccceEEEEEcCCC
Q 013274 330 DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD 408 (446)
Q Consensus 330 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~ 408 (446)
|++|++||+.+++... .+..+......++++|++.++++++. ..+++||+.+.+.+..+.+| ..|.+++|+|++
T Consensus 194 d~~i~i~d~~~~~~~~----~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~ 268 (340)
T 4aow_A 194 DKLVKVWNLANCKLKT----NHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNR 268 (340)
T ss_dssp TSCEEEEETTTTEEEE----EECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSS
T ss_pred CCEEEEEECCCCceee----EecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCC
Confidence 9999999999865321 22223445567889999998888754 68999999999988888866 579999999987
Q ss_pred CEEEEeeCCCcEEEeCCCCC
Q 013274 409 QELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 409 ~~lvtgs~D~~v~vW~~~~~ 428 (446)
.+ ++++.|++|+||+++..
T Consensus 269 ~~-~~~~~d~~i~iwd~~~~ 287 (340)
T 4aow_A 269 YW-LCAATGPSIKIWDLEGK 287 (340)
T ss_dssp SE-EEEEETTEEEEEETTTT
T ss_pred ce-eeccCCCEEEEEECCCC
Confidence 65 46677999999998754
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.96 E-value=1.9e-26 Score=226.77 Aligned_cols=234 Identities=23% Similarity=0.387 Sum_probs=186.3
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~ 178 (446)
.+|...|.++.+ +++++++|+.|++|++||+.+++.+..+. +.+.+.++.+ +..++++|+.|+.|++||++
T Consensus 130 ~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-----~~~~l~sg~~dg~i~vwd~~ 201 (435)
T 1p22_A 130 SETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY-----DERVIITGSSDSTVRVWDVN 201 (435)
T ss_dssp CSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC-----CSSEEEEEETTSCEEEEESS
T ss_pred cCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE-----CCCEEEEEcCCCeEEEEECC
Confidence 356777887654 68899999999999999999998887776 3455666666 23589999999999999999
Q ss_pred CCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCC
Q 013274 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQN 258 (446)
Q Consensus 179 ~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (446)
+++.+..+.+|.+.|.++.|++ . .+++|+.||+|++||++++......
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~----------------------------- 249 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLR----------------------------- 249 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEE-----------------------------
T ss_pred CCcEEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceee-----------------------------
Confidence 9999999999999999999974 3 5799999999999999764321100
Q ss_pred CCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEec
Q 013274 259 SSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDV 338 (446)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~ 338 (446)
....+|.+.|.+++| ++.+|++|+.|++|++||+
T Consensus 250 --------------------------------------------~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~ 283 (435)
T 1p22_A 250 --------------------------------------------RVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNT 283 (435)
T ss_dssp --------------------------------------------EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEET
T ss_pred --------------------------------------------eEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEEC
Confidence 012357788999998 7899999999999999999
Q ss_pred CcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCC
Q 013274 339 ESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 417 (446)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D 417 (446)
.+++... .+..+......+.+ ++..++++ ..+.+++||+.+++.+.++.+|...|.+++| ++++|++|+.|
T Consensus 284 ~~~~~~~----~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~d 355 (435)
T 1p22_A 284 STCEFVR----TLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYD 355 (435)
T ss_dssp TTCCEEE----EEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETT
T ss_pred CcCcEEE----EEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCC
Confidence 9875321 22222233333444 45566665 4568999999999999999999999999999 88999999999
Q ss_pred CcEEEeCCCC
Q 013274 418 RQILVWCPSR 427 (446)
Q Consensus 418 ~~v~vW~~~~ 427 (446)
++|++|++..
T Consensus 356 g~i~vwd~~~ 365 (435)
T 1p22_A 356 GKIKVWDLVA 365 (435)
T ss_dssp SCEEEEEHHH
T ss_pred CcEEEEECCC
Confidence 9999999753
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.2e-27 Score=225.94 Aligned_cols=212 Identities=18% Similarity=0.315 Sum_probs=171.9
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECC--CCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN--CTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~--~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vw 175 (446)
..+|...|.++.|+| ++++|++|+.|++|++||+. +++.+..+. +.+.+.++.+++.. +..+|++++.|+.|++|
T Consensus 7 ~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~~l~s~~~dg~v~iw 84 (379)
T 3jrp_A 7 ANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCSYDGKVLIW 84 (379)
T ss_dssp EEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGG-GCSEEEEEETTSCEEEE
T ss_pred ecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCC-CCCEEEEeccCCEEEEE
Confidence 358999999999987 78899999999999999997 444555554 44568888887642 24589999999999999
Q ss_pred eCCCCc--eeeeeeCCCCCeEEEEEecC--CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 176 DIASGA--ISQTLSGHRDGIMTVEWSTS--SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 176 d~~~~~--~~~~l~~h~~~v~sv~~s~~--~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|++++. ....+.+|...|.+++|+|+ +. +|++++.|+.|++||++.......+
T Consensus 85 d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~~d~~i~v~d~~~~~~~~~~---------------------- 141 (379)
T 3jrp_A 85 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSPI---------------------- 141 (379)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCTTSCCCEE----------------------
T ss_pred EcCCCceeEeeeecCCCcceEEEEeCCCCCCC-EEEEecCCCcEEEEecCCCCceeeE----------------------
Confidence 999987 67788899999999999998 66 4789999999999998764211000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc------------
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE------------ 319 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~------------ 319 (446)
...+|...|.+++|+|
T Consensus 142 ----------------------------------------------------~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 169 (379)
T 3jrp_A 142 ----------------------------------------------------IIDAHAIGVNSASWAPATIEEDGEHNGT 169 (379)
T ss_dssp ----------------------------------------------------EEECCTTCEEEEEECCCC----------
T ss_pred ----------------------------------------------------EecCCCCceEEEEEcCccccccccccCC
Confidence 1135677899999999
Q ss_pred -CCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccc
Q 013274 320 -DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEY 398 (446)
Q Consensus 320 -dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~ 398 (446)
++.+|++|+.|+.|++||+.++.... .....+.+|...
T Consensus 170 ~~~~~l~~~~~dg~i~i~d~~~~~~~~-----------------------------------------~~~~~~~~h~~~ 208 (379)
T 3jrp_A 170 KESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------------------VLESTLEGHSDW 208 (379)
T ss_dssp CTTCEEEEEETTSCEEEEEEETTTTEE-----------------------------------------EEEEEECCCSSC
T ss_pred CCCCEEEEEeCCCeEEEEEecCCCcce-----------------------------------------eeEEEEecccCc
Confidence 79999999999999999987653211 112456789999
Q ss_pred eEEEEEcCC---CCEEEEeeCCCcEEEeCCCCC
Q 013274 399 VNCCCFSSQ---DQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 399 v~~~~fSpd---~~~lvtgs~D~~v~vW~~~~~ 428 (446)
|++++|+|+ +++|++|+.|+.|+||++...
T Consensus 209 v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~ 241 (379)
T 3jrp_A 209 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 241 (379)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCC
Confidence 999999999 899999999999999998764
No 115
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.95 E-value=2e-26 Score=220.61 Aligned_cols=267 Identities=12% Similarity=0.090 Sum_probs=178.4
Q ss_pred cceeEeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 34 NYKEIVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 34 ~~~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
.++.+...+...+..+.+.++.+.++++|+.|++|+|||+.++... .. ..|...|.++.+.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~------------~~------~~~~~~v~~v~~~~ 110 (355)
T 3vu4_A 49 PVAHIMSQEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDV------------SR------IKVDAPVKDLFLSR 110 (355)
T ss_dssp TEEEEEEEECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEE------------EE------EECSSCEEEEEECS
T ss_pred CcceeeeeecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEE------------EE------EECCCceEEEEEcC
Confidence 3344444444468888887654444478889999999998765421 11 12455788887764
Q ss_pred cCCcEEEEEeCCCeEEEEECCCC-eeeEEEecCCceEEeeeccCCCCceEEEE--eeCCCcEEEEeCCCCc---------
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCT-RVVMNFKMPGKVYRTAMSPLAASHMLIAA--GTEDVQVRLCDIASGA--------- 181 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~las--gs~d~~v~vwd~~~~~--------- 181 (446)
+.++.+ .|++|++||+.++ +.+..+.. .....++++ .+++. |+.|+.|++||++++.
T Consensus 111 ---~~~~~~-~~~~i~i~d~~~~~~~~~~~~~--~~~~~~~s~-----~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~ 179 (355)
T 3vu4_A 111 ---EFIVVS-YGDVISVFKFGNPWKRITDDIR--FGGVCEFSN-----GLLVYSNEFNLGQIHITKLQSSGSATTQDQGV 179 (355)
T ss_dssp ---SEEEEE-ETTEEEEEESSTTCCBSSCCEE--EEEEEEEET-----TEEEEEESSCTTCEEEEECCC-----------
T ss_pred ---CEEEEE-EcCEEEEEECCCCceeeEEecc--CCceEEEEc-----cEEEEeCCCcCcEEEEEECCCCCccccccccc
Confidence 345544 4789999999987 65554443 222233443 23343 7899999999999865
Q ss_pred -------eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCc-EEEEEccCCceeEEeecccccccCCCcccccceeecccc
Q 013274 182 -------ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA-IRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSL 253 (446)
Q Consensus 182 -------~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~-I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (446)
....+.+|.+.|.+++|+|++++ |+||+.|++ |++||++++.++..+.
T Consensus 180 ~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~-l~s~s~d~~~v~iwd~~~~~~~~~~~----------------------- 235 (355)
T 3vu4_A 180 QQKAILGKGVLIKAHTNPIKMVRLNRKSDM-VATCSQDGTIIRVFKTEDGVLVREFR----------------------- 235 (355)
T ss_dssp -------CCEEECCCSSCEEEEEECTTSSE-EEEEETTCSEEEEEETTTCCEEEEEE-----------------------
T ss_pred cccccCcccEEEEccCCceEEEEECCCCCE-EEEEeCCCCEEEEEECCCCcEEEEEE-----------------------
Confidence 26788999999999999999885 799999998 9999998776544331
Q ss_pred ccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccc-cccCeEEEEEccCCCEEEEeecCCc
Q 013274 254 SAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATA-HYGAVTGLKVTEDGMYLLSAGSDSR 332 (446)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~fs~dg~~l~sgs~D~~ 332 (446)
.+ |.+.|++++|+|+|++|++++.|++
T Consensus 236 ----------------------------------------------------~g~h~~~v~~~~~s~~~~~l~s~s~d~~ 263 (355)
T 3vu4_A 236 ----------------------------------------------------RGLDRADVVDMKWSTDGSKLAVVSDKWT 263 (355)
T ss_dssp ----------------------------------------------------CTTCCSCEEEEEECTTSCEEEEEETTCE
T ss_pred ----------------------------------------------------cCCCCCcEEEEEECCCCCEEEEEECCCE
Confidence 12 6778999999999999999999999
Q ss_pred EEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 333 IRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 333 i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
|++||+..+..... .. + ... +.+. . ....-....+.+ ...+......++|+||++.|+
T Consensus 264 v~iw~~~~~~~~~~--~~--~--~~~----~~~~--~--~~~~~~~~~~~~--------~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 264 LHVFEIFNDQDNKR--HA--L--KGW----INMK--Y--FQSEWSLCNFKL--------SVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp EEEEESSCCSCCCS--EE--T--TTT----EECC--C--CCCSSCSEEEEC--------CCCTTCCCCEEEESSSSEEEE
T ss_pred EEEEEccCCCCccc--cc--c--cce----eecc--c--cccccceeEEEe--------ccCCCCCceEEEEeCCCCEEE
Confidence 99999986431100 00 0 000 0000 0 000000011111 112333457799999999999
Q ss_pred EeeCCCcEEEeCCCC
Q 013274 413 TGGNDRQILVWCPSR 427 (446)
Q Consensus 413 tgs~D~~v~vW~~~~ 427 (446)
+++.|+.+++|+...
T Consensus 322 ~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 322 VWPHTRMIETFKVVF 336 (355)
T ss_dssp EETTTTEEEEEEEEE
T ss_pred EEeCCCeEEEEEEEc
Confidence 999999999998753
No 116
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=2.1e-26 Score=217.71 Aligned_cols=267 Identities=17% Similarity=0.204 Sum_probs=175.2
Q ss_pred EeCCCccceeEEEeecC-CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC-
Q 013274 38 IVSPHKGSINSLQVDLT-EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD- 115 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~-~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~- 115 (446)
.+.+|.+.|++|+|+|. ++++|++|+.||+|++||++++....... ..+.+ ....+|...|.++.++|..
T Consensus 52 ~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~---~~~~~-----~~~~~~~~~v~~~~~~~~~~ 123 (351)
T 3f3f_A 52 SWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR---RWNKL-----CTLNDSKGSLYSVKFAPAHL 123 (351)
T ss_dssp EEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC---SEEEE-----EEECCCSSCEEEEEECCGGG
T ss_pred eeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc---Cccee-----eeecccCCceeEEEEcCCCC
Confidence 35689999999999875 47899999999999999998754211000 00111 1235799999999998732
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEe--------------cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFK--------------MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~ 181 (446)
+.+|++++.|++|++||+.+++.+..+. ....+.++.+++...+..++++++.|+.+.+|+...+.
T Consensus 124 ~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 203 (351)
T 3f3f_A 124 GLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK 203 (351)
T ss_dssp CSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC
T ss_pred CcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc
Confidence 7899999999999999998776543332 22346777888765456789999999999888888776
Q ss_pred e--eeeeeCCCCCeEEEEEecCCC---eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccC
Q 013274 182 I--SQTLSGHRDGIMTVEWSTSSE---WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG 256 (446)
Q Consensus 182 ~--~~~l~~h~~~v~sv~~s~~~~---~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (446)
. ...+.+|...|.+++|+|++. .+|++++.||.|++||++.+............... ........
T Consensus 204 ~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~--------~~~~~~~~-- 273 (351)
T 3f3f_A 204 LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM--------FDNSADVD-- 273 (351)
T ss_dssp EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------------------------
T ss_pred eeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec--------cCCCcccc--
Confidence 5 678889999999999999972 36899999999999999865432211110000000 00000000
Q ss_pred CCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEE
Q 013274 257 QNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 336 (446)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lW 336 (446)
............ . .................+|.+.|++++|+|+|++|+||+.|+.|++|
T Consensus 274 --------~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 274 --------MDAQGRSDSNTE-----E-------KAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred --------cccccccccccc-----e-------eeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 000000000000 0 00000000001111245788999999999999999999999999999
Q ss_pred ecCcCc
Q 013274 337 DVESGR 342 (446)
Q Consensus 337 d~~~~~ 342 (446)
|+.+++
T Consensus 334 ~~~~~~ 339 (351)
T 3f3f_A 334 KATYSN 339 (351)
T ss_dssp EECTTS
T ss_pred ecCcCc
Confidence 998764
No 117
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=1.6e-26 Score=220.79 Aligned_cols=246 Identities=18% Similarity=0.268 Sum_probs=182.3
Q ss_pred ccCccccEeEEEEeecC--CcEEEEEeCCCeEEEEECCC-Ceee-EEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEE
Q 013274 99 EHGHKYAISSAIWYPVD--TGLFVTGSYDHYVKVWDTNC-TRVV-MNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVR 173 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~--~~~l~s~s~D~~i~iWd~~~-~~~~-~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~ 173 (446)
..+|...|.++.|+|.. +.+|++|+.|++|++||+.+ +..+ ..+. +.+.+.++++++. ..+|++++.|+.|+
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~s~~~dg~v~ 111 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD---GSKVFTASCDKTAK 111 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT---SSEEEEEETTSEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC---CCEEEEEcCCCcEE
Confidence 35899999999999854 68999999999999999987 4443 3333 4667888999874 45899999999999
Q ss_pred EEeCCCCceeeeeeCCCCCeEEEEE--ecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 174 LCDIASGAISQTLSGHRDGIMTVEW--STSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 174 vwd~~~~~~~~~l~~h~~~v~sv~~--s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
+||++++.... +.+|...|.++.| +|+++ +|++++.||.|++||+++++++..+.
T Consensus 112 iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~~--------------------- 168 (368)
T 3mmy_A 112 MWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSSNPMMVLQ--------------------- 168 (368)
T ss_dssp EEETTTTEEEE-EEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCSSCSEEEE---------------------
T ss_pred EEEcCCCCcee-eccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCCcEEEEEe---------------------
Confidence 99999988665 5679999999999 77776 57899999999999998765433221
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
. ...+.++.+. +..+++++.|+
T Consensus 169 -------------------------------------------------------~-~~~~~~~~~~--~~~~~~~~~~~ 190 (368)
T 3mmy_A 169 -------------------------------------------------------L-PERCYCADVI--YPMAVVATAER 190 (368)
T ss_dssp -------------------------------------------------------C-SSCEEEEEEE--TTEEEEEEGGG
T ss_pred -------------------------------------------------------c-CCCceEEEec--CCeeEEEeCCC
Confidence 0 1134555555 44788899999
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCc----EEEE-eCCCceEEEEeecC---ceEEEeccccc------
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPA----VVFV-PCMTAVKAFDIWSG---KTCLTFRGHYE------ 397 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~d~~~~---~~~~~l~gH~~------ 397 (446)
.+++|++............ ........+.+.++.. .+++ .....+++|++... +....+.+|..
T Consensus 191 ~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (368)
T 3mmy_A 191 GLIVYQLENQPSEFRRIES--PLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTS 268 (368)
T ss_dssp CEEEEECSSSCEEEEECCC--SCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----C
T ss_pred cEEEEEeccccchhhhccc--cccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccccc
Confidence 9999999875432221111 0011112223322222 1444 45568999999877 55678888877
Q ss_pred ------ceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCCC
Q 013274 398 ------YVNCCCFSSQDQELYTGGNDRQILVWCPSRHIS 430 (446)
Q Consensus 398 ------~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~~ 430 (446)
.|++++|+||+++|++|+.|+.|+||++.....
T Consensus 269 ~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~ 307 (368)
T 3mmy_A 269 APQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTK 307 (368)
T ss_dssp CCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEE
T ss_pred ccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcE
Confidence 799999999999999999999999999986543
No 118
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=4.2e-25 Score=213.62 Aligned_cols=285 Identities=15% Similarity=0.116 Sum_probs=211.1
Q ss_pred eCCCccceeEEEeecCCCCEE-EEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 39 VSPHKGSINSLQVDLTEERYL-LSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l-~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
+..|. .+.+++|+|+ +++| ++++.|++|++||+.+++.. ... ..| ..+.++.++| +++
T Consensus 28 ~~~~~-~~~~~~~s~d-g~~l~~~~~~d~~i~v~d~~~~~~~------------~~~-----~~~-~~v~~~~~sp-dg~ 86 (391)
T 1l0q_A 28 IPVGS-NPMGAVISPD-GTKVYVANAHSNDVSIIDTATNNVI------------ATV-----PAG-SSPQGVAVSP-DGK 86 (391)
T ss_dssp EECSS-SEEEEEECTT-SSEEEEEEGGGTEEEEEETTTTEEE------------EEE-----ECS-SSEEEEEECT-TSS
T ss_pred eecCC-CcceEEECCC-CCEEEEECCCCCeEEEEECCCCeEE------------EEE-----ECC-CCccceEECC-CCC
Confidence 34554 5899999974 5554 78889999999999765421 011 122 2788888887 666
Q ss_pred EE-EEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEE
Q 013274 118 LF-VTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 118 ~l-~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv 196 (446)
++ ++++.|++|++||+.+++.+..+.....+..+++++.. ..++++++.|+.|++||+++++....+..| ..+.++
T Consensus 87 ~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~ 163 (391)
T 1l0q_A 87 QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDG--KKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGI 163 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEE
T ss_pred EEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCC--CEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceE
Confidence 55 56667899999999999998888877778888888753 245578888999999999999988888766 456999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
.|+|++++++++++.|+.|++||++++.+...+
T Consensus 164 ~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~----------------------------------------------- 196 (391)
T 1l0q_A 164 AVTPDGTKVYVANFDSMSISVIDTVTNSVIDTV----------------------------------------------- 196 (391)
T ss_dssp EECTTSSEEEEEETTTTEEEEEETTTTEEEEEE-----------------------------------------------
T ss_pred EECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE-----------------------------------------------
Confidence 999999887688899999999999876543222
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee---cCCcEEEEecCcCceeeeeeeEEEe
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG---SDSRIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs---~D~~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
.|...+.+++|+|+|++|++++ .|+.|++||+.+++.. . .+..
T Consensus 197 ------------------------------~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~-~---~~~~ 242 (391)
T 1l0q_A 197 ------------------------------KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKIT-A---RIPV 242 (391)
T ss_dssp ------------------------------ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEE-E---EEEC
T ss_pred ------------------------------ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEE-E---EEec
Confidence 1223478899999999998887 6899999999886432 1 1111
Q ss_pred ecCCCeEEEEcCCCcEEEEe-C-CCceEEEEeecCceEEEecccccceE---EEE------------EcCCC--------
Q 013274 354 QTSKPIQLATTQDPAVVFVP-C-MTAVKAFDIWSGKTCLTFRGHYEYVN---CCC------------FSSQD-------- 408 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~d~~~~~~~~~l~gH~~~v~---~~~------------fSpd~-------- 408 (446)
...+..+++++++..+++. . ...+++||+.+++....+..|..+.. .+. |+.+.
T Consensus 243 -~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~ 321 (391)
T 1l0q_A 243 -GPDPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLS 321 (391)
T ss_dssp -CSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETT
T ss_pred -CCCccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccccccccccccccccccccccccc
Confidence 2234568889998877544 3 46899999999999988888766532 123 33322
Q ss_pred --CEEEEeeCCCcEEEeCCCCCC
Q 013274 409 --QELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 409 --~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+.+.+.|.++++|+...+.
T Consensus 322 ~~~~~~~~~~~~~~~~W~~~~g~ 344 (391)
T 1l0q_A 322 EPVQFTDLSKDATEWKWDFGDGS 344 (391)
T ss_dssp CCEEEEECCBSCSEEEEECSSSC
T ss_pred ceEEEEeCCCCceEEEEECCCCc
Confidence 346778889999999986543
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=2.1e-26 Score=223.52 Aligned_cols=266 Identities=12% Similarity=0.109 Sum_probs=170.5
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee-------
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP------- 113 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~------- 113 (446)
.|.+.+....++ .++.+|++|+.|++|+|||++++.... ........||.+.|.++.|+|
T Consensus 87 ~~~~~~~~~~~~-~~~~~las~~~d~~v~lw~~~~~~~~~------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~ 153 (393)
T 4gq1_A 87 LHDGDGNVNSSP-VYSLFLACVCQDNTVRLIITKNETIIT------------QHVLGGKSGHHNFVNDIDIADVYSADNR 153 (393)
T ss_dssp ----------CC-EEEEEEEEEETTSCEEEEEEETTEEEE------------EEEECTTTSCSSCEEEEEEEEEECTTCS
T ss_pred ccCCCcceeecC-CCCCEEEEEeCCCcEEEEECCCCccce------------eeeecccCCCCCceEEEEEccccccccC
Confidence 344444444454 467799999999999999987654210 001124579999999999987
Q ss_pred cCCcEEEEEeCCCeEEEEECCCCeee-EEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee-------
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCTRVV-MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT------- 185 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~------- 185 (446)
.++++|||||.|++|||||+.++.++ ..+.+.+.+.+++|+|.. ..+|++|+.|+.|++||++++.....
T Consensus 154 ~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~--~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 154 LAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSN--PNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp EEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTE--EEEEEEEETTSEEEEEETTCCC----------C
T ss_pred CCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCC--CceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 36789999999999999999876654 455677788999998853 35899999999999999988753321
Q ss_pred ------------------eeCCCCCeEEEEEe-cCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccc
Q 013274 186 ------------------LSGHRDGIMTVEWS-TSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRK 246 (446)
Q Consensus 186 ------------------l~~h~~~v~sv~~s-~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (446)
..+|...+.++.|+ |+++ .+++++.|+++++||++.+.....+........
T Consensus 232 ~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~--------- 301 (393)
T 4gq1_A 232 KNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYNEISDSTMKLG--------- 301 (393)
T ss_dssp SCCCSEEEESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC--------------------------
T ss_pred ccceEEecccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCceEeeecCccc---------
Confidence 24688899999997 6666 478999999999999987543322211100000
Q ss_pred eeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc--CCCEE
Q 013274 247 VSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE--DGMYL 324 (446)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~--dg~~l 324 (446)
.....+.... ...+ .......|+| ++.++
T Consensus 302 ----------------------------~~~~~~~~~~--------------------~~~~-~~~~~~~~~~~~~~~~~ 332 (393)
T 4gq1_A 302 ----------------------------PKNLLPNVQG--------------------ISLF-PSLLGACPHPRYMDYFA 332 (393)
T ss_dssp ------------------------------CCSCSEEE--------------------ECSS-CCSSCCEECSSCTTEEE
T ss_pred ----------------------------cEEEcccccc--------------------cccc-CcceeEEEccCCCCEEE
Confidence 0000000000 0011 1122223443 55678
Q ss_pred EEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEee
Q 013274 325 LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIW 384 (446)
Q Consensus 325 ~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 384 (446)
++|+.|++|++||+.+++.... ..........++++|++.++++++.+.+.+|.+.
T Consensus 333 ~sgs~Dg~V~lwd~~~~~~~~~----~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 333 TAHSQHGLIQLINTYEKDSNSI----PIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp EEETTTTEEEEEETTCTTCCEE----EEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred EEECCCCEEEEEECCCCcEEEE----ecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 8899999999999998764322 1122345567999999999999988888888774
No 120
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.95 E-value=1.6e-25 Score=219.99 Aligned_cols=230 Identities=20% Similarity=0.380 Sum_probs=174.9
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+.+|.+.|++|+|+|.+..+|++|+.||+|++||+.++.... .. ........+|...|.++.|+|.++.
T Consensus 176 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~---------~~-~~~~~~~~~h~~~v~~v~~~p~~~~ 245 (430)
T 2xyi_A 176 RLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEH---------RV-IDAKNIFTGHTAVVEDVAWHLLHES 245 (430)
T ss_dssp EEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGG---------GE-EECSEEECCCSSCEEEEEECSSCTT
T ss_pred EecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCC---------ce-eccceeecCCCCCEeeeEEeCCCCC
Confidence 3568999999999997544499999999999999997642110 00 0011223589999999999987788
Q ss_pred EEEEEeCCCeEEEEECCCC---eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC-CceeeeeeCCCCC
Q 013274 118 LFVTGSYDHYVKVWDTNCT---RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-GAISQTLSGHRDG 192 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~-~~~~~~l~~h~~~ 192 (446)
+|++++.|+.|++||+.++ ..+..+. +.+.+.++++++.. ..++++|+.|+.|++||+++ +..+..+.+|.+.
T Consensus 246 ~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~--~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~ 323 (430)
T 2xyi_A 246 LFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYS--EFILATGSADKTVALWDLRNLKLKLHSFESHKDE 323 (430)
T ss_dssp EEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSC--TTEEEEEETTSEEEEEETTCTTSCSEEEECCSSC
T ss_pred EEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCC--CCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCC
Confidence 9999999999999999876 4555553 45668888998853 34789999999999999998 5678889999999
Q ss_pred eEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
|.++.|+|+++.+|++++.|+.|++||++......... . ..
T Consensus 324 v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~--------------------~------------------~~- 364 (430)
T 2xyi_A 324 IFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTE--------------------D------------------AE- 364 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHH--------------------H------------------HH-
T ss_pred EEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcc--------------------c------------------cc-
Confidence 99999999998778999999999999997532100000 0 00
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecCCcEEEEecCcC
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~~i~lWd~~~~ 341 (446)
. +.........+|...|++++|+|++. +|++++.|+.|++|++...
T Consensus 365 --------------~---------~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 365 --------------D---------GPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp --------------H---------CCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred --------------c---------CCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 0 00000011246788899999999999 8999999999999998753
No 121
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.94 E-value=3.7e-25 Score=214.54 Aligned_cols=287 Identities=14% Similarity=0.125 Sum_probs=180.7
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec--CCcE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV--DTGL 118 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~--~~~~ 118 (446)
+|.+.|++++|+|.++.+|++++.||+|++||+.++... .. ..+...+.++.+.+. ++.+
T Consensus 97 ~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------~~------~~~~~~~~~~~~~~~~~~~~~ 158 (408)
T 4a11_B 97 VHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA------------DV------FNFEETVYSHHMSPVSTKHCL 158 (408)
T ss_dssp CCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE------------EE------EECSSCEEEEEECSSCSSCCE
T ss_pred cCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc------------ee------ccCCCceeeeEeecCCCCCcE
Confidence 599999999999867789999999999999999765321 01 124556777777664 3459
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc-eeeee----------
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA-ISQTL---------- 186 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~-~~~~l---------- 186 (446)
+++++.|+.|++||+.+++.+..+. +.+.+.++++++.. ..++++|+.|+.|++||++++. ....+
T Consensus 159 ~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 159 VAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY--DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp EEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred EEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC--CcEEEEEcCCCcEEEEECCCCCccccccccccccccee
Confidence 9999999999999999988877776 45668888888753 2478999999999999998765 33333
Q ss_pred -----eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 187 -----SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 187 -----~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
.+|...|.+++|+|++++ |++++.||.|++||++++.....+.....
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~-l~~~~~dg~i~vwd~~~~~~~~~~~~~~~--------------------------- 288 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLH-LLTVGTDNRMRLWNSSNGENTLVNYGKVC--------------------------- 288 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSE-EEEEETTSCEEEEETTTCCBCCCCCCCCC---------------------------
T ss_pred eccccccccCceeEEEEcCCCCE-EEEecCCCeEEEEECCCCccceecccccc---------------------------
Confidence 679999999999999885 78999999999999987543111100000
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~ 341 (446)
......+........+..++.++.|+.|++||+.++
T Consensus 289 --------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 289 --------------------------------------------NNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp --------------------------------------------CCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred --------------------------------------------ccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 000000111112234456667788999999999987
Q ss_pred ceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcC-CCCEEEEeeCCCc
Q 013274 342 RNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS-QDQELYTGGNDRQ 419 (446)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp-d~~~lvtgs~D~~ 419 (446)
+.. ..+..+......+++++++..+++++ +..+++|++.+++.+.....+... ..+.| +...+.+++.|+.
T Consensus 325 ~~~----~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 397 (408)
T 4a11_B 325 EQI----TMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTTK---SQLNPAFEDAWSSSDEEGG 397 (408)
T ss_dssp CEE----EEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-----------------------------------
T ss_pred cce----eeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEec---cccccccceeecccCccCc
Confidence 542 12222344566788999998888775 468999999988876655544322 23333 3445567888999
Q ss_pred EEEeCCC
Q 013274 420 ILVWCPS 426 (446)
Q Consensus 420 v~vW~~~ 426 (446)
+++|+.+
T Consensus 398 ~~~W~~~ 404 (408)
T 4a11_B 398 TSAWSHP 404 (408)
T ss_dssp -------
T ss_pred eeecCCc
Confidence 9999765
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3e-24 Score=212.10 Aligned_cols=274 Identities=15% Similarity=0.122 Sum_probs=187.0
Q ss_pred CCCccceeEEEeecCCCCEE-EEeeCCCcEEEEEcc--cCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 40 SPHKGSINSLQVDLTEERYL-LSGASDSSVAVYDVQ--RATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l-~s~s~Dg~i~lWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
.+|.+.|++++|+| ++++| ++|+.||+|+|||+. ++... ..+. ..+|...|.++.|+| ++
T Consensus 99 ~~~~~~v~~~~~s~-d~~~l~~~~~~dg~v~iwd~~~~~~~~~------------~~~~---~~~~~~~v~~~~~sp-~~ 161 (450)
T 2vdu_B 99 PPIYSYIRNLRLTS-DESRLIACADSDKSLLVFDVDKTSKNVL------------KLRK---RFCFSKRPNAISIAE-DD 161 (450)
T ss_dssp -CCCCCEEEEEECT-TSSEEEEEEGGGTEEEEEEECSSSSSCE------------EEEE---EEECSSCEEEEEECT-TS
T ss_pred CccCCceEEEEEcC-CCCEEEEEECCCCeEEEEECcCCCCcee------------eeee---cccCCCCceEEEEcC-CC
Confidence 47888999999997 56775 999999999999997 44321 0110 125678899999987 78
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeE----EE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee-eeCCC
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVM----NF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT-LSGHR 190 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~----~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~-l~~h~ 190 (446)
.+|++|+.|+.|++|++.++.... .+ .+.+.+.++++++......+|++|+.|+.|++||++++..+.. +.+|.
T Consensus 162 ~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~ 241 (450)
T 2vdu_B 162 TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHK 241 (450)
T ss_dssp SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCS
T ss_pred CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCC
Confidence 899999999999999998776442 22 2456688888988521246899999999999999999988777 66999
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
+.|.+++|+ ++++ |++++.|++|++||+++++++..+........ +. ...... +
T Consensus 242 ~~v~~~~~s-d~~~-l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~---------------~~----~~~~~~-~---- 295 (450)
T 2vdu_B 242 HFVSSICCG-KDYL-LLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKP---------------YL----NDQHLA-P---- 295 (450)
T ss_dssp SCEEEEEEC-STTE-EEEEESSSEEEEEETTTCCEEEEEECHHHHGG---------------GC----CTTSBC------
T ss_pred CceEEEEEC-CCCE-EEEEeCCCeEEEEECCCCcEeeeecchhhhhh---------------hh----hhcccc-c----
Confidence 999999999 8775 78999999999999999887766642210000 00 000000 0
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee-cCCcEEEEec--CcCceeeee
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG-SDSRIRLWDV--ESGRNTLVN 347 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs-~D~~i~lWd~--~~~~~~~~~ 347 (446)
.. +. ......+...|.+++|+|++.+|++++ .|+.|++|++ .++. .+..
T Consensus 296 -----------~~---------------~~-~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~-~l~~ 347 (450)
T 2vdu_B 296 -----------PR---------------FQ-NENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKG-DLAL 347 (450)
T ss_dssp ------------------------------------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTT-CEEE
T ss_pred -----------cc---------------cc-ccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCC-ceee
Confidence 00 00 000012234689999999999999998 8999999999 4431 1122
Q ss_pred eeEEEeecCCCeEEEEcCCCcEEEEeCC-------CceEEEEeec
Q 013274 348 FETVRLQTSKPIQLATTQDPAVVFVPCM-------TAVKAFDIWS 385 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~d~~~ 385 (446)
...+... ..+..+++.++..++..... ..+++|.+..
T Consensus 348 ~~~~~~~-~~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 348 KQIITFP-YNVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYNL 391 (450)
T ss_dssp EEEEECS-SCEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEET
T ss_pred ccEeccC-CceEEEEecCCcEEEEEecccCCCCCCcceEEEEEEc
Confidence 2222222 45567788885433333321 2367777653
No 123
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=3.6e-24 Score=209.95 Aligned_cols=238 Identities=15% Similarity=0.165 Sum_probs=186.1
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec------CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM------PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA 178 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~ 178 (446)
.+.++.++| ++.++++++.|++|++||+.+++.+..... .+.+..+++.+ +..++++++.|+.|++||++
T Consensus 124 ~~~~~~~s~-~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~---~~~~~~s~~~d~~v~~~d~~ 199 (433)
T 3bws_A 124 QPKSVRFID-NTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPE---HNELWVSQMQANAVHVFDLK 199 (433)
T ss_dssp CBCCCEESS-SSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGG---GTEEEEEEGGGTEEEEEETT
T ss_pred CceEEEEeC-CCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcC---CCEEEEEECCCCEEEEEECC
Confidence 345677887 888899999999999999999887764332 23466677755 45689999999999999999
Q ss_pred CCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCC
Q 013274 179 SGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQN 258 (446)
Q Consensus 179 ~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (446)
+++....+..|...+.+++|+|+++.++++++.|+.|++||++++.....+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~---------------------------- 251 (433)
T 3bws_A 200 TLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD---------------------------- 251 (433)
T ss_dssp TCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC----------------------------
T ss_pred CceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec----------------------------
Confidence 9999999999999999999999999776777789999999998764332210
Q ss_pred CCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee--------cC
Q 013274 259 SSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG--------SD 330 (446)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs--------~D 330 (446)
+.+.+.+++|+|+|++|++++ .|
T Consensus 252 -------------------------------------------------~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~d 282 (433)
T 3bws_A 252 -------------------------------------------------KIGLPRGLLLSKDGKELYIAQFSASNQESGG 282 (433)
T ss_dssp -------------------------------------------------CCSEEEEEEECTTSSEEEEEEEESCTTCSCC
T ss_pred -------------------------------------------------CCCCceEEEEcCCCCEEEEEECCCCccccCC
Confidence 112378899999999999888 58
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe--CCCceEEEEeecCceEEEecccccceEEEEEcCCC
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQD 408 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~ 408 (446)
+.|++||+.+++... .+ .....+..+++++++..+++. ....+++||+.+++....+. |...+.+++|+||+
T Consensus 283 g~i~~~d~~~~~~~~-~~----~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg 356 (433)
T 3bws_A 283 GRLGIYSMDKEKLID-TI----GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDG 356 (433)
T ss_dssp EEEEEEETTTTEEEE-EE----EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTS
T ss_pred CeEEEEECCCCcEEe-ec----cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCC
Confidence 899999998874321 11 112245567888988655443 34689999999888887776 77889999999999
Q ss_pred CEEEEeeC---------------CCcEEEeCCCCCC
Q 013274 409 QELYTGGN---------------DRQILVWCPSRHI 429 (446)
Q Consensus 409 ~~lvtgs~---------------D~~v~vW~~~~~~ 429 (446)
++|++++. |+.|++|++.+..
T Consensus 357 ~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 357 KYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp SEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred CEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 99888776 5799999997654
No 124
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.5e-25 Score=235.36 Aligned_cols=212 Identities=18% Similarity=0.302 Sum_probs=170.2
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC--eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEE
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT--RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLC 175 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vw 175 (446)
..+|.+.|+++.++| ++++|++|+.|++|++||+..+ ..+..+. +.+.+.++.+++.. +..+|++|+.|+.|++|
T Consensus 5 l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~-~~~~l~s~s~Dg~I~vw 82 (753)
T 3jro_A 5 ANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPK-FGTILASCSYDGKVLIW 82 (753)
T ss_dssp ---CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTT-SCSEEEEEETTSCEEEE
T ss_pred cccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCC-CCCEEEEEeCCCeEEEE
Confidence 368999999999887 7889999999999999999743 4454444 44568888888752 24589999999999999
Q ss_pred eCCCCc--eeeeeeCCCCCeEEEEEecC--CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 176 DIASGA--ISQTLSGHRDGIMTVEWSTS--SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 176 d~~~~~--~~~~l~~h~~~v~sv~~s~~--~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
|++++. ....+.+|...|.+++|+|+ ++ .+++|+.||+|++||+++......
T Consensus 83 d~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~~~----------------------- 138 (753)
T 3jro_A 83 KEENGRWSQIAVHAVHSASVNSVQWAPHEYGP-LLLVASSDGKVSVVEFKENGTTSP----------------------- 138 (753)
T ss_dssp EEETTEEEEEEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEECCSSSCCCC-----------------------
T ss_pred ECCCCcccccccccCCCCCeEEEEECCCCCCC-EEEEEeCCCcEEEEEeecCCCcce-----------------------
Confidence 999986 67788899999999999998 76 579999999999999976421000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc------------
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE------------ 319 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~------------ 319 (446)
....+|...|.+++|+|
T Consensus 139 ---------------------------------------------------~~~~~~~~~v~~l~~~p~~~~~~~~~~~~ 167 (753)
T 3jro_A 139 ---------------------------------------------------IIIDAHAIGVNSASWAPATIEEDGEHNGT 167 (753)
T ss_dssp ---------------------------------------------------EEEECCSSCEEEEEECCCC---------C
T ss_pred ---------------------------------------------------eEeecCCCceEEEEecCcccccccccccC
Confidence 01135677899999999
Q ss_pred -CCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccc
Q 013274 320 -DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEY 398 (446)
Q Consensus 320 -dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~ 398 (446)
++.+|++|+.||+|++||+.++.... .....+.+|.+.
T Consensus 168 ~d~~~l~sgs~dg~I~iwd~~~~~~~~-----------------------------------------~~~~~~~~h~~~ 206 (753)
T 3jro_A 168 KESRKFVTGGADNLVKIWKYNSDAQTY-----------------------------------------VLESTLEGHSDW 206 (753)
T ss_dssp GGGCCEEEEETTSCEEEEEEETTTTEE-----------------------------------------EEEEEECCCSSC
T ss_pred CCCCEEEEEECCCeEEEEeccCCcccc-----------------------------------------eeeeeecCCCCc
Confidence 58999999999999999987653210 122456789999
Q ss_pred eEEEEEcCC---CCEEEEeeCCCcEEEeCCCCC
Q 013274 399 VNCCCFSSQ---DQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 399 v~~~~fSpd---~~~lvtgs~D~~v~vW~~~~~ 428 (446)
|++++|+|+ +++|+||+.|++|++|++...
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNE 239 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSS
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCC
Confidence 999999999 999999999999999998764
No 125
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.94 E-value=4.9e-24 Score=199.66 Aligned_cols=245 Identities=20% Similarity=0.307 Sum_probs=181.3
Q ss_pred eEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCC---ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 107 SSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG---KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 107 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
.++.|++ ++ +||+| .|++|+|||+++++++..+...+ .+.++++++. ..++++|+.|+.|++||+++++.+
T Consensus 29 ~~l~WS~-~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~---~~~l~sgs~Dg~v~iw~~~~~~~~ 102 (318)
T 4ggc_A 29 NLVDWSS-GN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE---GNYLAVGTSSAEVQLWDVQQQKRL 102 (318)
T ss_dssp BCEEECT-TS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT---SSEEEEEETTSEEEEEETTTTEEE
T ss_pred eEEEECC-CC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC---CCEEEEEECCCcEEEeecCCceeE
Confidence 4567875 43 77665 59999999999999988877543 4788888875 458999999999999999999999
Q ss_pred eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCC
Q 013274 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKP 263 (446)
Q Consensus 184 ~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (446)
..+.+|...+.++.+.+ . ++++++.++.+++|+........
T Consensus 103 ~~~~~h~~~~~~~~~~~--~-~l~s~~~~~~~~~~~~~~~~~~~------------------------------------ 143 (318)
T 4ggc_A 103 RNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAEHHV------------------------------------ 143 (318)
T ss_dssp EEEECCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSSCEE------------------------------------
T ss_pred EEecCccceEEEeecCC--C-EEEEEecCCceEeeecCCCceeE------------------------------------
Confidence 99999999998877653 4 57999999999999976432100
Q ss_pred CCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCce
Q 013274 264 RAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRN 343 (446)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~ 343 (446)
....+|...+..+.+++++.+|++++.|++|++||+.+++.
T Consensus 144 ---------------------------------------~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 144 ---------------------------------------ATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp ---------------------------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred ---------------------------------------EEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 01235777899999999999999999999999999988653
Q ss_pred eeeeeeEEEeecCCCeEEEEcCCC-cEEEEeC---CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEee--CC
Q 013274 344 TLVNFETVRLQTSKPIQLATTQDP-AVVFVPC---MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGG--ND 417 (446)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs--~D 417 (446)
.................+...++. ..+..+. ...+++|+......... ..|...+.++.|+|+++.+++++ .|
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~sg~~d 263 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSA-VDAHSQVCSILWSPHYKELISGHGFAQ 263 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEE-EECSSCEEEEEEETTTTEEEEEECTTT
T ss_pred cccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccccccccc-ccceeeeeeeeecccccceEEEEEcCC
Confidence 322122222222333445566554 3443332 24689999877766554 45777899999999999988654 79
Q ss_pred CcEEEeCCCCCCCCCcCCC
Q 013274 418 RQILVWCPSRHISDGVDAG 436 (446)
Q Consensus 418 ~~v~vW~~~~~~~~~~~~~ 436 (446)
++|+||++.+......+.|
T Consensus 264 ~~i~iwd~~~~~~~~~l~g 282 (318)
T 4ggc_A 264 NQLVIWKYPTMAKVAELKG 282 (318)
T ss_dssp CCEEEEETTTCCEEEEECC
T ss_pred CEEEEEECCCCcEEEEEcC
Confidence 9999999987655444433
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=4.2e-25 Score=204.48 Aligned_cols=216 Identities=11% Similarity=0.112 Sum_probs=138.4
Q ss_pred CccceeEEEeecCC---CCEEEEeeCCCcEEEEEcccCcCCCC--CCccccccceEEec-c---ccccCccccEeEEEEe
Q 013274 42 HKGSINSLQVDLTE---ERYLLSGASDSSVAVYDVQRATDYEG--GGHIAKHRSVFVVD-K---QHEHGHKYAISSAIWY 112 (446)
Q Consensus 42 H~~~v~~l~~s~~~---~~~l~s~s~Dg~i~lWd~~~~~~~~~--~~~~~~~~~~~~~~-~---~~~~gh~~~V~~~~~~ 112 (446)
|.+.|++|+|+|+| +.++++++.+ +++|++.++..... .++-...+.+.+.. . ....+|...+..+.|+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 56789999998631 6677776642 44444433221000 00000000000000 0 0123677777777776
Q ss_pred ec--CCcEEEEEeCCCeEEEEECCCCeeeEEEecCC----ceEEeeeccCCCC---------ceEEEEeeCCCcEEEEeC
Q 013274 113 PV--DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG----KVYRTAMSPLAAS---------HMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 113 ~~--~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~----~~~~~~~~~~~~~---------~~~lasgs~d~~v~vwd~ 177 (446)
+. ++.+|+|+|.|++|||||++++++++++.... .+..++|+|++.- ...+++|+.|++|++||.
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 63 56899999999999999999999998886321 2445567764320 012478899999999999
Q ss_pred CCCceeeee-----eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 178 ASGAISQTL-----SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 178 ~~~~~~~~l-----~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
++++.+..+ .+|...+.+..++ +. ++++++.|++|+|||+++++++..+.
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~-~lASgS~DgTIkIWDl~tGk~l~tL~---------------------- 322 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVK--DH-CAAAILTSGTIAIWDLLLGQCTALLP---------------------- 322 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEE--TT-EEEEEETTSCEEEEETTTCSEEEEEC----------------------
T ss_pred CCCEEEEEEEeeccCCCcceeEccccC--CC-EEEEEcCCCcEEEEECCCCcEEEEec----------------------
Confidence 999877655 3787776665554 44 57999999999999999887765542
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccC-eEEEEEccCCCEEEEeecCC
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGA-VTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~fs~dg~~l~sgs~D~ 331 (446)
+|... +.+++|+|||++|+||+.|+
T Consensus 323 ------------------------------------------------------gH~~~vvs~vafSPDG~~LaSGS~D~ 348 (356)
T 2w18_A 323 ------------------------------------------------------PVSDQHWSFVKWSGTDSHLLAGQKDG 348 (356)
T ss_dssp ------------------------------------------------------CC--CCCCEEEECSSSSEEEEECTTS
T ss_pred ------------------------------------------------------CCCCCeEEEEEECCCCCEEEEEECCC
Confidence 34433 44689999999999999999
Q ss_pred cEEEEec
Q 013274 332 RIRLWDV 338 (446)
Q Consensus 332 ~i~lWd~ 338 (446)
+|||||+
T Consensus 349 TIklWd~ 355 (356)
T 2w18_A 349 NIFVYHY 355 (356)
T ss_dssp CEEEEEE
T ss_pred cEEEecC
Confidence 9999985
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.1e-24 Score=212.75 Aligned_cols=289 Identities=10% Similarity=0.049 Sum_probs=202.1
Q ss_pred CccceeEEEeecCCCCEEEEee----CCC----cEEEEEc--ccCcCCCCCCccccccceEEeccccccCccccEeEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSGA----SDS----SVAVYDV--QRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIW 111 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s----~Dg----~i~lWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~ 111 (446)
+.+.|+...|++.+.+++++|+ .|| +|+|||+ .++.... .....+|...+..+.+
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~---------------~~~~~~~~~~~~~~~~ 125 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLA---------------QNSYKVNKQWLRYAGH 125 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEE---------------EEEEEECGGGHHHHHH
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEe---------------eeEEEcChhHHHHHHH
Confidence 3457888888877667888887 568 9999999 7654210 0011233333332222
Q ss_pred ee-------------cCCcEEEEEeCC------CeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCC--
Q 013274 112 YP-------------VDTGLFVTGSYD------HYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDV-- 170 (446)
Q Consensus 112 ~~-------------~~~~~l~s~s~D------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~-- 170 (446)
.+ ..+..++.++.+ ++|++||++.+.........+.+..++++|++ ..|++++.++
T Consensus 126 ~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg---~~la~~s~~~~~ 202 (415)
T 2hqs_A 126 TASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDG---SKLAYVTFESGR 202 (415)
T ss_dssp HHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTS---SEEEEEECTTSS
T ss_pred HHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCC---CEEEEEEecCCC
Confidence 21 014456655554 79999999865544333456678888998854 4778887775
Q ss_pred -cEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCc--EEEEEccCCceeEEeecccccccCCCcccccce
Q 013274 171 -QVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGA--IRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKV 247 (446)
Q Consensus 171 -~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~--I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (446)
.|++||+++++.. .+..|.+.+.+++|+|+++.++++++.|+. |++||++++.+. .
T Consensus 203 ~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~------------------- 261 (415)
T 2hqs_A 203 SALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-Q------------------- 261 (415)
T ss_dssp CEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-E-------------------
T ss_pred cEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-e-------------------
Confidence 9999999998764 577888999999999999976557777665 999998764321 0
Q ss_pred eeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe
Q 013274 248 SISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA 327 (446)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg 327 (446)
...|.+.+.+++|+|||++|+.+
T Consensus 262 ---------------------------------------------------------l~~~~~~~~~~~~spdg~~l~~~ 284 (415)
T 2hqs_A 262 ---------------------------------------------------------VTDGRSNNTEPTWFPDSQNLAFT 284 (415)
T ss_dssp ---------------------------------------------------------CCCCSSCEEEEEECTTSSEEEEE
T ss_pred ---------------------------------------------------------CcCCCCcccceEECCCCCEEEEE
Confidence 11344568899999999999888
Q ss_pred ec-CC--cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC----CceEEEEeecCceEEEecccccceE
Q 013274 328 GS-DS--RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM----TAVKAFDIWSGKTCLTFRGHYEYVN 400 (446)
Q Consensus 328 s~-D~--~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~~~~~~~~l~gH~~~v~ 400 (446)
+. ++ .|.+||+.+++.... .........++++|++..++.... ..+.+||+.+++. ..+..|. .+.
T Consensus 285 s~~~g~~~i~~~d~~~~~~~~l-----~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~ 357 (415)
T 2hqs_A 285 SDQAGRPQVYKVNINGGAPQRI-----TWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDE 357 (415)
T ss_dssp ECTTSSCEEEEEETTSSCCEEC-----CCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCE
T ss_pred ECCCCCcEEEEEECCCCCEEEE-----ecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcC
Confidence 76 44 677779887653211 111223446788999988776543 4789999988776 4566665 899
Q ss_pred EEEEcCCCCEEEEeeCCC---cEEEeCCCCCCCCCc
Q 013274 401 CCCFSSQDQELYTGGNDR---QILVWCPSRHISDGV 433 (446)
Q Consensus 401 ~~~fSpd~~~lvtgs~D~---~v~vW~~~~~~~~~~ 433 (446)
+++|+|||++|++++.|+ .|.+|++++.....+
T Consensus 358 ~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l 393 (415)
T 2hqs_A 358 TPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARL 393 (415)
T ss_dssp EEEECTTSSEEEEEEEETTEEEEEEEETTSCCEEEC
T ss_pred CeEEcCCCCEEEEEEcCCCccEEEEEECCCCcEEEe
Confidence 999999999999998887 799999886654433
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=7.6e-24 Score=213.54 Aligned_cols=283 Identities=11% Similarity=0.064 Sum_probs=205.9
Q ss_pred eecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEE
Q 013274 51 VDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKV 130 (446)
Q Consensus 51 ~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~i 130 (446)
|+| ++.++++++.|++|.+||..+++.. ..+ ..+|. +..+.++| ++++|++++.|++|++
T Consensus 145 ~~p-~~~~~vs~~~d~~V~v~D~~t~~~~------------~~i----~~g~~--~~~v~~sp-dg~~l~v~~~d~~V~v 204 (543)
T 1nir_A 145 LDL-PNLFSVTLRDAGQIALVDGDSKKIV------------KVI----DTGYA--VHISRMSA-SGRYLLVIGRDARIDM 204 (543)
T ss_dssp CCG-GGEEEEEEGGGTEEEEEETTTCCEE------------EEE----ECSTT--EEEEEECT-TSCEEEEEETTSEEEE
T ss_pred cCC-CCEEEEEEcCCCeEEEEECCCceEE------------EEE----ecCcc--cceEEECC-CCCEEEEECCCCeEEE
Confidence 776 5789999999999999998876421 001 01333 66666776 8999999999999999
Q ss_pred EEC--CCCeeeEEEecCCceEEeeeccCCC-CceEEEEee-CCCcEEEEeCCCCceeeeeeCC----------CC-CeEE
Q 013274 131 WDT--NCTRVVMNFKMPGKVYRTAMSPLAA-SHMLIAAGT-EDVQVRLCDIASGAISQTLSGH----------RD-GIMT 195 (446)
Q Consensus 131 Wd~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~lasgs-~d~~v~vwd~~~~~~~~~l~~h----------~~-~v~s 195 (446)
||+ .+++++..+........+++++... +..++++++ .++.|.+||..+++++.++..+ .+ .+.+
T Consensus 205 ~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~ 284 (543)
T 1nir_A 205 IDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA 284 (543)
T ss_dssp EETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred EECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEE
Confidence 999 8888888888766678888887211 233556665 5899999999999988887652 23 7889
Q ss_pred EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 196 VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+.++|+++.++++...+++|.+||+.+.+++...
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~---------------------------------------------- 318 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVT---------------------------------------------- 318 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSCEEE----------------------------------------------
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcceeE----------------------------------------------
Confidence 9999988888889999999999998764322100
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe-ecCCcEEEEecCcCceeeeeeeEEE-e
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA-GSDSRIRLWDVESGRNTLVNFETVR-L 353 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg-s~D~~i~lWd~~~~~~~~~~~~~~~-~ 353 (446)
...+...+..++|+|+|++|+++ ..+++|++||+.+++... .+.... .
T Consensus 319 -----------------------------~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~-~i~~g~~p 368 (543)
T 1nir_A 319 -----------------------------SIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSA-LVDVGKTP 368 (543)
T ss_dssp -----------------------------EEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE-EEECSSSB
T ss_pred -----------------------------EeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEE-eeccCCCC
Confidence 00112235567899999976654 568999999999875321 111100 0
Q ss_pred ecCCCeEEEEcCC-CcEEEEeC--CCceEEEEeec-------CceEEEecccccceEEEEEcCCCCEEEEee-------C
Q 013274 354 QTSKPIQLATTQD-PAVVFVPC--MTAVKAFDIWS-------GKTCLTFRGHYEYVNCCCFSSQDQELYTGG-------N 416 (446)
Q Consensus 354 ~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~d~~~-------~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs-------~ 416 (446)
+......+ +.|+ +.+++++. ...+.+||+.+ ++.+.++.+|.+.+..++||||+++|++++ .
T Consensus 369 h~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 369 HPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI 447 (543)
T ss_dssp CCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred CCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCccc
Confidence 11122222 4565 44444443 36899999988 889999999999999999999999999987 3
Q ss_pred CCcEEEeCCCCCCC
Q 013274 417 DRQILVWCPSRHIS 430 (446)
Q Consensus 417 D~~v~vW~~~~~~~ 430 (446)
+++|.||+..+...
T Consensus 448 ~~~v~v~d~~~~~~ 461 (543)
T 1nir_A 448 SQSVAVFDLKNLDA 461 (543)
T ss_dssp HTCEEEEETTCTTS
T ss_pred CceEEEEECCCCCC
Confidence 78999999986653
No 129
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.93 E-value=8e-23 Score=206.08 Aligned_cols=296 Identities=14% Similarity=0.149 Sum_probs=214.2
Q ss_pred eeEEEeecCCCCEEEEeeCCCcEEEEEc--ccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec---CCcEEE
Q 013274 46 INSLQVDLTEERYLLSGASDSSVAVYDV--QRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV---DTGLFV 120 (446)
Q Consensus 46 v~~l~~s~~~~~~l~s~s~Dg~i~lWd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~---~~~~l~ 120 (446)
+..++|+| ++++|++++.|++|++||+ .+++.. ..+ .+...+..+.++|. ++++++
T Consensus 181 ~~~v~~sp-dg~~l~v~~~d~~V~v~D~~~~t~~~~------------~~i------~~g~~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 181 VHISRMSA-SGRYLLVIGRDARIDMIDLWAKEPTKV------------AEI------KIGIEARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECT-TSCEEEEEETTSEEEEEETTSSSCEEE------------EEE------ECCSEEEEEEECCSTTCTTTEEE
T ss_pred cceEEECC-CCCEEEEECCCCeEEEEECcCCCCcEE------------EEE------ecCCCcceEEeCCCcCCCCCEEE
Confidence 88999997 6889999999999999999 543210 001 12234566777651 788888
Q ss_pred EEeC-CCeEEEEECCCCeeeEEEecCC------------ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee--e
Q 013274 121 TGSY-DHYVKVWDTNCTRVVMNFKMPG------------KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ--T 185 (446)
Q Consensus 121 s~s~-D~~i~iWd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~--~ 185 (446)
++++ |++|.+||..+++++..+...+ .+..+.+++.. ..++++...++.|.+||+.+.+.+. .
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~--~~~~vs~~~~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH--PEFIVNVKETGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEECTTSSSCEEEE
T ss_pred EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC--CEEEEEECCCCeEEEEEecCCCcceeEE
Confidence 8874 8999999999999888776432 35566777653 3578888899999999998876543 4
Q ss_pred eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCC
Q 013274 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRA 265 (446)
Q Consensus 186 l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (446)
+ .+...+..+.|+|+++++++++..+++|.+||+.++++...+....
T Consensus 320 i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~-------------------------------- 366 (543)
T 1nir_A 320 I-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGK-------------------------------- 366 (543)
T ss_dssp E-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS--------------------------------
T ss_pred e-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCC--------------------------------
Confidence 4 3566788999999999877777789999999999887665542100
Q ss_pred ccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC-CCEEEEee-cCCcEEEEecCcCce
Q 013274 266 PQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED-GMYLLSAG-SDSRIRLWDVESGRN 343 (446)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d-g~~l~sgs-~D~~i~lWd~~~~~~ 343 (446)
..|.+....+ ++|+ |..++|+. .|++|.+||+.+...
T Consensus 367 ----------------------------------------~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~ 405 (543)
T 1nir_A 367 ----------------------------------------TPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNH 405 (543)
T ss_dssp ----------------------------------------SBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTC
T ss_pred ----------------------------------------CCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCC
Confidence 1233323333 4676 66777775 689999999987211
Q ss_pred ---eeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--------CCceEEEEeecCceE-EEe--------cccccceEEEE
Q 013274 344 ---TLVNFETVRLQTSKPIQLATTQDPAVVFVPC--------MTAVKAFDIWSGKTC-LTF--------RGHYEYVNCCC 403 (446)
Q Consensus 344 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~~~~~-~~l--------~gH~~~v~~~~ 403 (446)
....+..+..+......++++|++..+++.. ...+.+||+.+++.. ..+ ..|...+..+.
T Consensus 406 ~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 485 (543)
T 1nir_A 406 PQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPE 485 (543)
T ss_dssp TTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEE
T ss_pred chhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEecc
Confidence 0111233333334556788999999999976 348999999998876 443 46788999999
Q ss_pred EcCCCCEEEEe-----eCCCcEEEeCCCCCCCCCcCCC
Q 013274 404 FSSQDQELYTG-----GNDRQILVWCPSRHISDGVDAG 436 (446)
Q Consensus 404 fSpd~~~lvtg-----s~D~~v~vW~~~~~~~~~~~~~ 436 (446)
|+|||+.|+.+ +.|++|.|||..+.++..++.+
T Consensus 486 ~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 486 YNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp ECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred CCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 99999998854 3489999999998766555543
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=4.2e-22 Score=194.59 Aligned_cols=264 Identities=15% Similarity=0.116 Sum_probs=189.1
Q ss_pred eCCCccceeEEEeecC-------------CCCEEEEeeCC------CcEEEEEcccCcCCCCCCccccccceEEeccccc
Q 013274 39 VSPHKGSINSLQVDLT-------------EERYLLSGASD------SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE 99 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~-------------~~~~l~s~s~D------g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (446)
+.+|...+..+++++. .+..|+.++.+ ++|++||++.... ...
T Consensus 113 ~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~------------------~~l 174 (415)
T 2hqs_A 113 YKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ------------------FVV 174 (415)
T ss_dssp EEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC------------------EEE
T ss_pred EEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC------------------EEE
Confidence 5677777777776531 14456666654 7999999864221 112
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCC---eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCc--EEE
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDH---YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ--VRL 174 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~---~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~--v~v 174 (446)
.+|...|.++.|+| ++++|++++.|+ +|++||+.+++........+.+..++++|++. .++++++.++. |++
T Consensus 175 ~~~~~~v~~~~~Sp-dg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~--~la~~~~~~g~~~i~~ 251 (415)
T 2hqs_A 175 HRSPQPLMSPAWSP-DGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGS--KLAFALSKTGSLNLYV 251 (415)
T ss_dssp EEESSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSS--EEEEEECTTSSCEEEE
T ss_pred eCCCCcceeeEEcC-CCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCC--EEEEEEecCCCceEEE
Confidence 36778899999987 888999999885 99999999988765555566778888988642 34446666554 999
Q ss_pred EeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCC--cEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG--AIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 175 wd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
||+++++. ..+..|...+.+++|+|+++++++++..++ .|.+||+.++....
T Consensus 252 ~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~------------------------- 305 (415)
T 2hqs_A 252 MDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQR------------------------- 305 (415)
T ss_dssp EETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEE-------------------------
T ss_pred EECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEE-------------------------
Confidence 99998875 567789999999999999987543443456 56666765432100
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecC--
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSD-- 330 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D-- 330 (446)
...|...+.+++|+|||++|++++.+
T Consensus 306 ----------------------------------------------------l~~~~~~~~~~~~spdG~~l~~~~~~~g 333 (415)
T 2hqs_A 306 ----------------------------------------------------ITWEGSQNQDADVSSDGKFMVMVSSNGG 333 (415)
T ss_dssp ----------------------------------------------------CCCSSSEEEEEEECTTSSEEEEEEECSS
T ss_pred ----------------------------------------------------EecCCCcccCeEECCCCCEEEEEECcCC
Confidence 01123357889999999999988875
Q ss_pred -CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-C---ceEEEEeecCceEEEecccccceEEEEEc
Q 013274 331 -SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-T---AVKAFDIWSGKTCLTFRGHYEYVNCCCFS 405 (446)
Q Consensus 331 -~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~d~~~~~~~~~l~gH~~~v~~~~fS 405 (446)
..|++||+.+++... + .. ......++++|++..++.++. . .+.+||+. ++....+.+|.+.|.+++||
T Consensus 334 ~~~i~~~d~~~~~~~~--l---~~-~~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 334 QQHIAKQDLATGGVQV--L---SS-TFLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWS 406 (415)
T ss_dssp CEEEEEEETTTCCEEE--C---CC-SSSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEEC
T ss_pred ceEEEEEECCCCCEEE--e---cC-CCCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccc
Confidence 689999999875321 1 11 124567889999987776543 2 57788875 66678999999999999999
Q ss_pred CCC
Q 013274 406 SQD 408 (446)
Q Consensus 406 pd~ 408 (446)
|--
T Consensus 407 ~~~ 409 (415)
T 2hqs_A 407 PYL 409 (415)
T ss_dssp CCC
T ss_pred ccc
Confidence 964
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.90 E-value=6.9e-21 Score=179.60 Aligned_cols=285 Identities=12% Similarity=0.116 Sum_probs=189.9
Q ss_pred EeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe-CCCeE
Q 013274 50 QVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS-YDHYV 128 (446)
Q Consensus 50 ~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s-~D~~i 128 (446)
.|..+.+..+++++.+++|++||+++++... .. ..+...+ .+.++| +++++++++ .++.|
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~------------~~-----~~~~~~~-~~~~s~-dg~~l~~~~~~~~~i 64 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILN------------QI-----TLGYDFV-DTAITS-DCSNVVVTSDFCQTL 64 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEE------------EE-----ECCCCEE-EEEECS-SSCEEEEEESTTCEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceee------------eE-----EccCCcc-eEEEcC-CCCEEEEEeCCCCeE
Confidence 3555556678999999999999998764210 00 1223334 667776 676555554 48999
Q ss_pred EEEECCCCee-eEEEecCCceEE-eeeccCCCCceEEEEeeCC-C--cEEEEeCCCCceeeeeeCCCCCeEEEEEecCCC
Q 013274 129 KVWDTNCTRV-VMNFKMPGKVYR-TAMSPLAASHMLIAAGTED-V--QVRLCDIASGAISQTLSGHRDGIMTVEWSTSSE 203 (446)
Q Consensus 129 ~iWd~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~lasgs~d-~--~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~ 203 (446)
.+||+.+++. ...+........ ++++++. .+++++..+ + .|++||+++++.+..+..+ ....+++|+|+++
T Consensus 65 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~ 140 (331)
T 3u4y_A 65 VQIETQLEPPKVVAIQEGQSSMADVDITPDD---QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGN 140 (331)
T ss_dssp EEEECSSSSCEEEEEEECSSCCCCEEECTTS---SEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSS
T ss_pred EEEECCCCceeEEecccCCCCccceEECCCC---CEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCC
Confidence 9999998887 665555444444 7777743 355555444 3 8999999999888777654 4468999999998
Q ss_pred eEEEEeeCCCc-EEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccc
Q 013274 204 WILVTGGCDGA-IRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282 (446)
Q Consensus 204 ~~l~S~s~Dg~-I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
+++++...++. |.+|++...+.+.... .
T Consensus 141 ~l~~~~~~~~~~i~~~~~~~~g~~~~~~--~------------------------------------------------- 169 (331)
T 3u4y_A 141 GLILIDRSSANTVRRFKIDADGVLFDTG--Q------------------------------------------------- 169 (331)
T ss_dssp CEEEEEETTTTEEEEEEECTTCCEEEEE--E-------------------------------------------------
T ss_pred EEEEEecCCCceEEEEEECCCCcEeecC--C-------------------------------------------------
Confidence 77777777788 9999987533211100 0
Q ss_pred eeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEE
Q 013274 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQL 361 (446)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 361 (446)
. ...+......++|+|||++| +++..+++|++||+.+++.. .....+. ....+..+
T Consensus 170 ~---------------------~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~-~~~~~~~-~~~~~~~~ 226 (331)
T 3u4y_A 170 E---------------------FISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENI-TLLNAVG-TNNLPGTI 226 (331)
T ss_dssp E---------------------EECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSC-EEEEEEE-CSSCCCCE
T ss_pred c---------------------cccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCccc-ceeeecc-CCCCCceE
Confidence 0 00011236789999999965 55567899999999887541 0011111 13455678
Q ss_pred EEcCCCcEEEEeCC--CceEEEEeecCce--EEEeccc----ccc---eEEEEEcCCCCEEE-EeeCCCcEEEeCCCCCC
Q 013274 362 ATTQDPAVVFVPCM--TAVKAFDIWSGKT--CLTFRGH----YEY---VNCCCFSSQDQELY-TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 362 ~~~~~~~~~~~~~~--~~~~~~d~~~~~~--~~~l~gH----~~~---v~~~~fSpd~~~lv-tgs~D~~v~vW~~~~~~ 429 (446)
+++|++..+++... ..+.+||+.+++. +..+..+ ... +++++|+||+++|+ +++.++.|.||++....
T Consensus 227 ~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 227 VVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp EECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred EECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 99999997777643 4688999988876 4444333 222 35689999999886 45556799999998765
Q ss_pred CC
Q 013274 430 SD 431 (446)
Q Consensus 430 ~~ 431 (446)
..
T Consensus 307 ~~ 308 (331)
T 3u4y_A 307 VG 308 (331)
T ss_dssp EE
T ss_pred cc
Confidence 43
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=9.1e-21 Score=179.17 Aligned_cols=278 Identities=11% Similarity=0.163 Sum_probs=179.2
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC-CeEEEEECC-
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD-HYVKVWDTN- 134 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D-~~i~iWd~~- 134 (446)
.++++++.|++|++||++..... ..+.. ..|...+.++.++| ++++|++++.+ +.|++|+++
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~---------~~~~~------~~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL---------TLTQV------VDVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE---------EEEEE------EECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECT
T ss_pred EEEEeCCCCCeEEEEEECCCCcE---------EEeee------EecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecC
Confidence 45566688999999998531100 00100 13445566777876 78888888876 999999997
Q ss_pred -CCe--eeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC---CceeeeeeCCCCCeEEEEEecCCCeEEEE
Q 013274 135 -CTR--VVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS---GAISQTLSGHRDGIMTVEWSTSSEWILVT 208 (446)
Q Consensus 135 -~~~--~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~---~~~~~~l~~h~~~v~sv~~s~~~~~~l~S 208 (446)
+++ .+..+...+.+..+++++.. ..+++++..++.|.+||+++ ......+..+ ..+.+++|+|++++++++
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~ 146 (343)
T 1ri6_A 70 DDGALTFAAESALPGSLTHISTDHQG--QFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVP 146 (343)
T ss_dssp TTCCEEEEEEEECSSCCSEEEECTTS--SEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEE
T ss_pred CCCceeeccccccCCCCcEEEEcCCC--CEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEe
Confidence 554 33445545566677787753 23445555688999999943 3444555544 458899999999876555
Q ss_pred eeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCC
Q 013274 209 GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKG 288 (446)
Q Consensus 209 ~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (446)
+..|+.|++||+.+...+...... ..
T Consensus 147 ~~~~~~v~~~d~~~~~~~~~~~~~--------------------------------------------------~~---- 172 (343)
T 1ri6_A 147 ALKQDRICLFTVSDDGHLVAQDPA--------------------------------------------------EV---- 172 (343)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEE--------------------------------------------------EE----
T ss_pred cCCCCEEEEEEecCCCceeeeccc--------------------------------------------------cc----
Confidence 558999999999762211110000 00
Q ss_pred ccccccCCCcccccccccccccCeEEEEEccCCCEEE-EeecCCcEEEEecCc--CceeeeeeeEEE-eec-----CCCe
Q 013274 289 SVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL-SAGSDSRIRLWDVES--GRNTLVNFETVR-LQT-----SKPI 359 (446)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~-sgs~D~~i~lWd~~~--~~~~~~~~~~~~-~~~-----~~~~ 359 (446)
.......+..++|+|+|++|+ ++..+++|++||+.. ++... ..... ... ..+.
T Consensus 173 ----------------~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~ 234 (343)
T 1ri6_A 173 ----------------TTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIEC--VQTLDMMPENFSDTRWAA 234 (343)
T ss_dssp ----------------ECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEE--EEEEECSCTTCCSCCCEE
T ss_pred ----------------ccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEE--EeeccccCccccccCCcc
Confidence 000112467899999999765 445899999999954 32211 11111 001 1233
Q ss_pred EEEEcCCCcEEEEeC--CCceEEEEee--cC--ceEEEecccccceEEEEEcCCCCEEEEee-CCCcEEEeCCC
Q 013274 360 QLATTQDPAVVFVPC--MTAVKAFDIW--SG--KTCLTFRGHYEYVNCCCFSSQDQELYTGG-NDRQILVWCPS 426 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~--~~~~~~~d~~--~~--~~~~~l~gH~~~v~~~~fSpd~~~lvtgs-~D~~v~vW~~~ 426 (446)
.+++++++..+++.. ...+.+|++. ++ +....+..+.. +.+++|+||+++|++++ .|+.|.+|+++
T Consensus 235 ~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 235 DIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred ceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 588999988776543 4679999997 33 34455665555 89999999999888777 68999999443
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=9.6e-21 Score=198.63 Aligned_cols=324 Identities=11% Similarity=0.070 Sum_probs=191.4
Q ss_pred ccceeEEEeecCCCCEEEEeeC-CC-----cEEEEEcccCcCCCCCCccccccc-----eEEecccc---c--cCccccE
Q 013274 43 KGSINSLQVDLTEERYLLSGAS-DS-----SVAVYDVQRATDYEGGGHIAKHRS-----VFVVDKQH---E--HGHKYAI 106 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~-Dg-----~i~lWd~~~~~~~~~~~~~~~~~~-----~~~~~~~~---~--~gh~~~V 106 (446)
...|++++||| +|++|++++. |+ +|++||++++..... +..+.. .+...... . ......|
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 111 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLL---VDSKVVLPGTETLSDEEKARRERQRIAAMTGI 111 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEE---ECGGGTC--------------------CCEES
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCceeEc---cchhhcccccccccchhhhhhhhhhhccccCc
Confidence 35689999997 6889999998 88 899999987642100 000000 00000000 0 0000336
Q ss_pred eEEEEeecCCcEEEEEeCCCeEEEEECCCC---eeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 107 SSAIWYPVDTGLFVTGSYDHYVKVWDTNCT---RVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 107 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
.++.|+| |+++|++++. ++|.+||+.++ .........+.+..++++|++ ..|++++ ++.|++||+.+++..
T Consensus 112 ~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG---~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 112 VDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKG---GFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp CCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTS---SEEEEEE-TTEEEEEETTTTEEE
T ss_pred ceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCC---CEEEEEe-CCcEEEEecCCCCEE
Confidence 6777876 8899998887 89999999987 544333344567788888854 4677766 568999999998766
Q ss_pred eeeeCCCCC----------------eEEEEEecCCCeEEEEeeCC-CcEEEEEccCCceeEEeecccccccCCCcccccc
Q 013274 184 QTLSGHRDG----------------IMTVEWSTSSEWILVTGGCD-GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRK 246 (446)
Q Consensus 184 ~~l~~h~~~----------------v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (446)
.....+... +.++.|+|+++++ ++++.| +.+..|+... ....... .
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l-~~~~~d~~~~~~~~~~~------~~p~~~~----------~ 248 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAI-AYARIDESPVPVQKRYE------VYADRTD----------V 248 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCE-EEEEEECTTSCEEEEEE------ECSSCEE----------E
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEE-EEEEEcCCCCceEecCC------CCCCccc----------c
Confidence 555444432 4789999999974 555544 3444443100 0000000 0
Q ss_pred eeeccccccCCCCCcCCCCccccccCCCceeecccceeecC--CccccccCCCcccccccccccccCeEEEEEccCCCEE
Q 013274 247 VSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAK--GSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL 324 (446)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l 324 (446)
......... .... ...+..+... +... .+. ....|...+..++| |||++|
T Consensus 249 ~~~~~~~~g---------------~~~~---~~~l~~~d~~~~~~~~-~~~--------~~~~~~~~~~~~~~-pDg~~l 300 (741)
T 2ecf_A 249 IEQRYPAAG---------------DANV---QVKLGVISPAEQAQTQ-WID--------LGKEQDIYLARVNW-RDPQHL 300 (741)
T ss_dssp EEEECCBTT---------------SCCC---EEEEEEECSSTTCCCE-EEC--------CCSCSSEEEEEEEE-EETTEE
T ss_pred eEeecCCCC---------------CCCC---eeEEEEEECCCCCceE-Eec--------CCCCcceEEEEEEe-CCCCEE
Confidence 000000000 0000 0000000000 0000 000 00135567899999 999999
Q ss_pred EEeec-----CCcEEEEecCcCceeeeeeeEEEeecC----CCeEEEEcCCCcEEEEeCC-CceEEEEee-cCceEEEec
Q 013274 325 LSAGS-----DSRIRLWDVESGRNTLVNFETVRLQTS----KPIQLATTQDPAVVFVPCM-TAVKAFDIW-SGKTCLTFR 393 (446)
Q Consensus 325 ~sgs~-----D~~i~lWd~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~~~~~~d~~-~~~~~~~l~ 393 (446)
+.++. +..|++||+.+++.... +.. ... ....+++++++.+++++.. ...++|.+. +++ ...+.
T Consensus 301 ~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~---~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~ 375 (741)
T 2ecf_A 301 SFQRQSRDQKKLDLVEVTLASNQQRVL-AHE---TSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALT 375 (741)
T ss_dssp EEEEEETTSSEEEEEEEETTTCCEEEE-EEE---ECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESC
T ss_pred EEEEecccCCeEEEEEEECCCCceEEE-EEc---CCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeee
Confidence 87654 67899999998764322 111 111 1235688999887776654 357888775 455 78889
Q ss_pred ccccceEEE-EEcCCCCEEE-EeeCCC--cEEEeCCC
Q 013274 394 GHYEYVNCC-CFSSQDQELY-TGGNDR--QILVWCPS 426 (446)
Q Consensus 394 gH~~~v~~~-~fSpd~~~lv-tgs~D~--~v~vW~~~ 426 (446)
.|...|..+ +||||++.|+ +++.|+ .++||.++
T Consensus 376 ~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 376 HGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred ecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 999889887 5999999876 555565 89999775
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=3.8e-20 Score=174.42 Aligned_cols=267 Identities=12% Similarity=0.122 Sum_probs=180.8
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc-cEeEEEEeecCCc-EEEEEeCCCeEEEEECC
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY-AISSAIWYPVDTG-LFVTGSYDHYVKVWDTN 134 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~-~V~~~~~~~~~~~-~l~s~s~D~~i~iWd~~ 134 (446)
++|++++.|++|.+||+.+++... .. ..++.. .+..+.++| +++ ++++++.++.|.+||+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~------------~~----~~~~~~~~~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDK------------VI----TIADAGPTPMVPMVAP-GGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE------------EE----ECTTCTTCCCCEEECT-TSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEE------------EE----EcCCCCCCccceEEcC-CCCEEEEEeCCCCeEEEEECC
Confidence 479999999999999987654210 00 012211 245567776 565 45677778999999999
Q ss_pred CCeeeEEEecCC------ceEEeeeccCCCCceEEEEee------------CCCcEEEEeCCCCceeeeeeCCCCCeEEE
Q 013274 135 CTRVVMNFKMPG------KVYRTAMSPLAASHMLIAAGT------------EDVQVRLCDIASGAISQTLSGHRDGIMTV 196 (446)
Q Consensus 135 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~lasgs------------~d~~v~vwd~~~~~~~~~l~~h~~~v~sv 196 (446)
+++.+..+.... .+..++++++. ..++++. .++.|.+||+++++....+.. ...+.++
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg---~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~ 140 (337)
T 1pby_B 65 TGETLGRIDLSTPEERVKSLFGAALSPDG---KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITML 140 (337)
T ss_dssp TCCEEEEEECCBTTEEEECTTCEEECTTS---SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCE
T ss_pred CCCeEeeEEcCCcccccccccceEECCCC---CEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCccee
Confidence 998887776543 44556676643 3455554 579999999999888777764 4567889
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
+|+|++++++ ++ ++.|.+||+.+++....+.......
T Consensus 141 ~~s~dg~~l~-~~--~~~i~~~d~~~~~~~~~~~~~~~~~---------------------------------------- 177 (337)
T 1pby_B 141 AWARDGSKLY-GL--GRDLHVMDPEAGTLVEDKPIQSWEA---------------------------------------- 177 (337)
T ss_dssp EECTTSSCEE-EE--SSSEEEEETTTTEEEEEECSTTTTT----------------------------------------
T ss_pred EECCCCCEEE-Ee--CCeEEEEECCCCcEeeeeeccccCC----------------------------------------
Confidence 9999998754 44 6899999998876554442111000
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee------------------------cCCc
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG------------------------SDSR 332 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs------------------------~D~~ 332 (446)
++ .|+|||.+|+..+ ....
T Consensus 178 ----------------------------------~~---~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (337)
T 1pby_B 178 ----------------------------------ET---YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTG 220 (337)
T ss_dssp ----------------------------------TT---BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEE
T ss_pred ----------------------------------Cc---eeCCCccEEeeeccCCCceeeeeeccccccccccccccccc
Confidence 00 1112222111110 1116
Q ss_pred EEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 333 IRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 333 i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
|.+||+.+++.... ........+..+++++++..++++ ...+.+||+.+++....+..+ ..+.+++|+||+++|+
T Consensus 221 v~~~d~~~~~~~~~---~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 295 (337)
T 1pby_B 221 LLTMDLETGEMAMR---EVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVW 295 (337)
T ss_dssp EEEEETTTCCEEEE---EEEECSSCEEEEEECTTSSEEEEE-ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEE
T ss_pred eEEEeCCCCCceEe---ecCCCCCceeeEEECCCCCEEEEe-CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEE
Confidence 89999998764311 111222345568899999888877 678999999988887777654 4578999999999999
Q ss_pred EeeCCCcEEEeCCCCCC
Q 013274 413 TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 413 tgs~D~~v~vW~~~~~~ 429 (446)
+++.|+.|++|++.+..
T Consensus 296 ~~~~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 296 LGGALGDLAAYDAETLE 312 (337)
T ss_dssp EESBSSEEEEEETTTCC
T ss_pred EEcCCCcEEEEECcCCc
Confidence 99999999999998654
No 135
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=5.3e-19 Score=167.89 Aligned_cols=275 Identities=12% Similarity=0.081 Sum_probs=191.7
Q ss_pred CCccceeEEEeecCCCCEEEEeeC-------CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEee
Q 013274 41 PHKGSINSLQVDLTEERYLLSGAS-------DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP 113 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~-------Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~ 113 (446)
+....+..++|+| ++++|++++. +++|.+||.++++... ... ....+..+.+++
T Consensus 38 ~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~------------~~~------~~~~~~~~~~s~ 98 (353)
T 3vgz_A 38 AVGKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ------------AIH------NDLKPFGATINN 98 (353)
T ss_dssp EEESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCEEE------------EEE------ESSCCCSEEEET
T ss_pred hhccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE------------EEe------cCCCcceEEECC
Confidence 3446788999997 4555666653 6789999987654210 000 111234456666
Q ss_pred cCCc-EEEEEeCCCeEEEEECCCCeeeEEEecCC----------ceEEeeeccCCCCceEEEEe-eCCCcEEEEeCCCCc
Q 013274 114 VDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPG----------KVYRTAMSPLAASHMLIAAG-TEDVQVRLCDIASGA 181 (446)
Q Consensus 114 ~~~~-~l~s~s~D~~i~iWd~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~lasg-s~d~~v~vwd~~~~~ 181 (446)
+++ ++++...++.|.+||+.+++.+..+.... ....+.++++.. .+++++ ..++.|.+||+++++
T Consensus 99 -dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~~i~~~d~~~~~ 175 (353)
T 3vgz_A 99 -TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATN--TVYISGIGKESVIWVVDGGNIK 175 (353)
T ss_dssp -TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTT--EEEEEEESSSCEEEEEETTTTE
T ss_pred -CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCC--EEEEEecCCCceEEEEcCCCCc
Confidence 666 55666778999999999999888777643 145677777532 344444 357899999999999
Q ss_pred eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 182 ~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
....+..+...+.+++|+|++++ ++.++.++.|.+||+.+++....+...
T Consensus 176 ~~~~~~~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~----------------------------- 225 (353)
T 3vgz_A 176 LKTAIQNTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKKLL----------------------------- 225 (353)
T ss_dssp EEEEECCCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEECC-----------------------------
T ss_pred eEEEecCCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEEcC-----------------------------
Confidence 88888766677889999999986 566777999999999876544332100
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee-cCCcEEEEecCc
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG-SDSRIRLWDVES 340 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs-~D~~i~lWd~~~ 340 (446)
..++...+..++|+|+|++|+.++ .++.|.+||+.+
T Consensus 226 -------------------------------------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~ 262 (353)
T 3vgz_A 226 -------------------------------------------DDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRN 262 (353)
T ss_dssp -------------------------------------------CSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTT
T ss_pred -------------------------------------------CCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCC
Confidence 001233478899999999766555 459999999988
Q ss_pred CceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCC
Q 013274 341 GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND 417 (446)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D 417 (446)
++... ... ...+..+++++++..+++.. ...+.+||..+++....+..+. .+.+++|+||+++|+.+..+
T Consensus 263 ~~~~~----~~~--~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 263 GNILA----KVA--APESLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPT-HPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp CCEEE----EEE--CSSCCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCS-EEEEEEECTTSCEEEEEEEC
T ss_pred CcEEE----EEE--cCCCceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCC-CCCeEEEcCCCCEEEEEEcc
Confidence 75321 111 23345688899988666654 4689999999999888877654 67999999999976654443
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.86 E-value=3e-20 Score=171.37 Aligned_cols=254 Identities=13% Similarity=0.114 Sum_probs=173.3
Q ss_pred EeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCC-Ceee
Q 013274 61 SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNC-TRVV 139 (446)
Q Consensus 61 s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-~~~~ 139 (446)
+++.|++|++||+.++... ....|...|.++.++| ++++|++++ ++.|++||+.+ ++..
T Consensus 17 ~~~~~~~i~~~d~~~~~~~------------------~~~~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~~~ 76 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR------------------VVWQTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPSPE 76 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE------------------EEEEESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCSCE
T ss_pred CCCcceeEEEEeCCCCcee------------------eeccCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCCce
Confidence 5578999999998765320 1124677888988887 788998887 78999999998 7765
Q ss_pred EEEecC--CceEEeeeccCCCCceEEEEee--CCCcEEEE--eCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCC
Q 013274 140 MNFKMP--GKVYRTAMSPLAASHMLIAAGT--EDVQVRLC--DIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG 213 (446)
Q Consensus 140 ~~~~~~--~~~~~~~~~~~~~~~~~lasgs--~d~~v~vw--d~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg 213 (446)
...... ..+..+.++++. .+|++++ .++..+|| |+.++. ...+..+. .+..++|+|++++++++++.|+
T Consensus 77 ~~~~~~~~~~~~~~~~spdg---~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~ 151 (297)
T 2ojh_A 77 KVDTGFATICNNDHGISPDG---ALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQ 151 (297)
T ss_dssp ECCCTTCCCBCSCCEECTTS---SEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETT
T ss_pred EeccccccccccceEECCCC---CEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCC
Confidence 544332 345566777643 4677776 33445555 555554 34444443 4889999999998766888999
Q ss_pred cEEEEEccCCc-eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCcccc
Q 013274 214 AIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQ 292 (446)
Q Consensus 214 ~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (446)
.++||+++... ...
T Consensus 152 ~~~l~~~~~~~~~~~----------------------------------------------------------------- 166 (297)
T 2ojh_A 152 VFDIYSMDIDSGVET----------------------------------------------------------------- 166 (297)
T ss_dssp EEEEEEEETTTCCEE-----------------------------------------------------------------
T ss_pred ceEEEEEECCCCcce-----------------------------------------------------------------
Confidence 99999864211 000
Q ss_pred ccCCCcccccccccccccCeEEEEEccCCCEEEEee-cCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEE
Q 013274 293 RLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG-SDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVF 371 (446)
Q Consensus 293 ~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs-~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (446)
....|...+.+++|+|+|++|+.++ .|+.+++|++.........+ .........+.++|++..++
T Consensus 167 -----------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 167 -----------RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERI---TDSAYGDWFPHPSPSGDKVV 232 (297)
T ss_dssp -----------ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEEC---CCCSEEEEEEEECTTSSEEE
T ss_pred -----------EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEE---ecCCcccCCeEECCCCCEEE
Confidence 0112345688999999999887666 59999999886321111111 11112234577889988776
Q ss_pred EeCC------------CceEEEEeecCce--EEEecccccceEEEEEcCCCCEEEEeeCCC
Q 013274 372 VPCM------------TAVKAFDIWSGKT--CLTFRGHYEYVNCCCFSSQDQELYTGGNDR 418 (446)
Q Consensus 372 ~~~~------------~~~~~~d~~~~~~--~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~ 418 (446)
..+. ..+.+||+.+++. +..+.+|...+.+++|+||+++|++++.|.
T Consensus 233 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 233 FVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6543 3488899987765 445668999999999999999999888764
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=2.7e-20 Score=194.58 Aligned_cols=316 Identities=11% Similarity=0.062 Sum_probs=183.8
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc---cEeEEEEeecCCcEEE
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY---AISSAIWYPVDTGLFV 120 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~~~~~~~~~~~l~ 120 (446)
..+.+++|+| +|+++++ +.||+|++||+.+++.. .. ..+|.. .|.++.++| |+++|+
T Consensus 17 ~~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~~~------------~~-----~~~~~~~~~~v~~~~~Sp-Dg~~l~ 76 (723)
T 1xfd_A 17 IHDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNTST------------VL-----IEGKKIESLRAIRYEISP-DREYAL 76 (723)
T ss_dssp CCCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCCCE------------EE-----ECTTTTTTTTCSEEEECT-TSSEEE
T ss_pred ccccccEEcC-CCcEEEE-eCCCCEEEEECCCCcEE------------EE-----eccccccccccceEEECC-CCCEEE
Confidence 3467889997 5776665 78999999999876431 01 123332 478888887 899999
Q ss_pred EEeCC---------CeEEEEECCCCeeeEEEe-cCCc---eEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee
Q 013274 121 TGSYD---------HYVKVWDTNCTRVVMNFK-MPGK---VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS 187 (446)
Q Consensus 121 s~s~D---------~~i~iWd~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~ 187 (446)
+++.| +.+.+||+.+++. ..+. ..++ +..++++|++ ..||+++. +.|++||+.+++......
T Consensus 77 ~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG---~~la~~~~-~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 77 FSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPEVSNAKLQYAGWGPKG---QQLIFIFE-NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp EEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTTCCSCCCSBCCBCSST---TCEEEEET-TEEEEESSSSSCCEEEEC
T ss_pred EEecCccceeecceeeEEEEECCCCce-EeccCCccccccccccEECCCC---CEEEEEEC-CeEEEEECCCCceEEEec
Confidence 99875 7888999998876 2232 2222 4556777754 46777664 799999999987766555
Q ss_pred CCCCCe------------------EEEEEecCCCeEEEEee-CCCcEEEEEccCCceeEEeecccccccCCCccccccee
Q 013274 188 GHRDGI------------------MTVEWSTSSEWILVTGG-CDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVS 248 (446)
Q Consensus 188 ~h~~~v------------------~sv~~s~~~~~~l~S~s-~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (446)
.+...+ .+++|+|+++.+ ++++ .++.+++|++.....- ..+.. ..
T Consensus 152 ~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~l-a~~~~~~~~~~~~~~~~~~~~-----------~~~~~----~~ 215 (723)
T 1xfd_A 152 TGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRL-AYAAINDSRVPIMELPTYTGS-----------IYPTV----KP 215 (723)
T ss_dssp CCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEE-EEEEEECTTSCEEEECCCSSS-----------SSCCC----EE
T ss_pred CCCCCceECcccceeEEEEeccCcceEEECCCCCEE-EEEEECCCccceEEeeccCCc-----------CCCcc----ee
Confidence 544433 789999999975 5555 4457888886432100 00000 00
Q ss_pred eccccccCCCCCcCCCCccccccCCCceeecccceeec-CCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe
Q 013274 249 ISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPA-KGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA 327 (446)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg 327 (446)
+...... . . +. ...+..... .+.....+. .......|...+..++|||||++|++.
T Consensus 216 ~~~~~~G-~-----~--------~~----~~~l~~~d~~~~~~~~~l~-----~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 216 YHYPKAG-S-----E--------NP----SISLHVIGLNGPTHDLEMM-----PPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp EECCBTT-S-----C--------CC----EEEEEEEESSSSCCCEECC-----CCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred ccCCCCC-C-----C--------CC----eeEEEEEECCCCceeEEee-----CCccCCCccceeEEEEEeCCCeEEEEE
Confidence 0000000 0 0 00 000000000 000000000 000112245668999999999988776
Q ss_pred ec----CCcEEEEecCcCceeeeeeeEEEeecCC----CeEEEEcCCCcEEEEe---CCC------ceEEEEeecCce--
Q 013274 328 GS----DSRIRLWDVESGRNTLVNFETVRLQTSK----PIQLATTQDPAVVFVP---CMT------AVKAFDIWSGKT-- 388 (446)
Q Consensus 328 s~----D~~i~lWd~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~---~~~------~~~~~d~~~~~~-- 388 (446)
+. +..|++||+.+++.... +.. ..... ...++++|++..++.. ... .+.+||+.++..
T Consensus 273 ~~~~~~~~~i~~~d~~~g~~~~~-~~~--~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~ 349 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGVCTKK-HED--ESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSND 349 (723)
T ss_dssp EETTSCEEEEEEEETTTCCEEEE-EEE--ECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSC
T ss_pred EcCCCCeEEEEEEeCCCCcceEE-EEe--ccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcc
Confidence 53 35799999998764321 111 01111 1256889998865543 222 244555223333
Q ss_pred -EEEecccccceE-EEEEcCCCCEEEEeeCC---CcEEEeCCC
Q 013274 389 -CLTFRGHYEYVN-CCCFSSQDQELYTGGND---RQILVWCPS 426 (446)
Q Consensus 389 -~~~l~gH~~~v~-~~~fSpd~~~lvtgs~D---~~v~vW~~~ 426 (446)
...+..+...+. .++||||++.|+..+.+ +.++||.++
T Consensus 350 ~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 350 NIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp CCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred ceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 555654444454 47999999999866555 789999875
No 138
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=2.2e-19 Score=195.31 Aligned_cols=280 Identities=11% Similarity=0.048 Sum_probs=197.9
Q ss_pred CccceeEEEee-cCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc-cEeEEEEeecCCcEE
Q 013274 42 HKGSINSLQVD-LTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY-AISSAIWYPVDTGLF 119 (446)
Q Consensus 42 H~~~v~~l~~s-~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~-~V~~~~~~~~~~~~l 119 (446)
|.+.|.+++|+ | ++++|++++ ++.|.+|++.++... ....|.. .+..+.|+ +++.|
T Consensus 294 ~~~~v~~~~~S~p-dG~~la~~~-~~~i~~~~~~~~~~~------------------~~~~~~~~~~~~~~~s--dg~~l 351 (1045)
T 1k32_A 294 SIPSKFAEDFSPL-DGDLIAFVS-RGQAFIQDVSGTYVL------------------KVPEPLRIRYVRRGGD--TKVAF 351 (1045)
T ss_dssp ECGGGGEEEEEEC-GGGCEEEEE-TTEEEEECTTSSBEE------------------ECSCCSCEEEEEECSS--SEEEE
T ss_pred cccccceeeecCC-CCCEEEEEE-cCEEEEEcCCCCceE------------------EccCCCcceEEeeeEc--CCCeE
Confidence 45579999999 7 577788887 889999998754310 1124555 67777776 78899
Q ss_pred EEEeCCCeEE-EEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEE
Q 013274 120 VTGSYDHYVK-VWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEW 198 (446)
Q Consensus 120 ~s~s~D~~i~-iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~ 198 (446)
++++.+..+. +||+.+++..........+..++++|+ ...|++++.++.|++||+++++....+.+|.+.+.+++|
T Consensus 352 ~~~s~~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpD---G~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~ 428 (1045)
T 1k32_A 352 IHGTREGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRN---GKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 428 (1045)
T ss_dssp EEEETTEEEEEEEETTTCCEEECCCCCCSEEEEEECTT---SSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEE
T ss_pred EEEECCCceEEEEECCCCCceEecCCccceeeeEECCC---CCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEE
Confidence 9999988898 999987765432223345677888875 457889999999999999999888888789999999999
Q ss_pred ecCCCeEEEEeeCC----------CcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 199 STSSEWILVTGGCD----------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 199 s~~~~~~l~S~s~D----------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
+|+++++ ++++.+ +.|++||+.++. ...
T Consensus 429 SpDG~~l-a~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~---------------------------------------- 466 (1045)
T 1k32_A 429 SDNSRFI-AYGFPLKHGETDGYVMQAIHVYDMEGRK-IFA---------------------------------------- 466 (1045)
T ss_dssp CTTSCEE-EEEEEECSSTTCSCCEEEEEEEETTTTE-EEE----------------------------------------
T ss_pred CCCCCeE-EEEecCccccccCCCCCeEEEEECCCCc-EEE----------------------------------------
Confidence 9999974 555544 489999987643 111
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCcee----
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT---- 344 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~---- 344 (446)
...|...+..++|+|||++|+.++.++..++|+.......
T Consensus 467 ------------------------------------l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~ 510 (1045)
T 1k32_A 467 ------------------------------------ATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVV 510 (1045)
T ss_dssp ------------------------------------CSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSC
T ss_pred ------------------------------------eeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccC
Confidence 0123344677899999999999999888888875432110
Q ss_pred --e--eee-------------------------------eEEEeecCCCeEEEEcCCCcEEEE------------eC--C
Q 013274 345 --L--VNF-------------------------------ETVRLQTSKPIQLATTQDPAVVFV------------PC--M 375 (446)
Q Consensus 345 --~--~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~~~~------------~~--~ 375 (446)
. ..+ ..+.........+++++++..+++ .. .
T Consensus 511 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~ 590 (1045)
T 1k32_A 511 SKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEK 590 (1045)
T ss_dssp BEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCC
T ss_pred ceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCC
Confidence 0 000 000001112235677888876664 11 1
Q ss_pred CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 376 TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 376 ~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+..||+.+++.. .+. ..+..++|||||++|++++.| .|++|++.+..
T Consensus 591 ~~l~~~d~~~~~~~-~l~---~~v~~~~~S~DG~~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 591 GVLLKYDVKTRKVT-EVK---NNLTDLRLSADRKTVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EEEEEEETTTCCEE-EEE---EEEEEEEECTTSCEEEEEETT-SCEEEEESSCT
T ss_pred ceEEEEECCCCcEE-Eee---cCcceEEECCCCCEEEEEcCC-cEEEEeCccCc
Confidence 25667788777653 333 668899999999999999877 89999997655
No 139
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=7.9e-20 Score=186.38 Aligned_cols=269 Identities=10% Similarity=0.025 Sum_probs=180.8
Q ss_pred ccceeEEEeecCCCCEEEEeeC-CCcEEEEEcccCcCCCCCCccccccceEEeccccccCcc-ccEeEEEEeecCCcEEE
Q 013274 43 KGSINSLQVDLTEERYLLSGAS-DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHK-YAISSAIWYPVDTGLFV 120 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~-Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~V~~~~~~~~~~~~l~ 120 (446)
..+|++++|+| ||+.||+++. ||+++||+++++... ....|. ..|.++.|+| + ++++
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~------------------~lt~~~~~~~~~~~~sp-d-~~l~ 79 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETV------------------KLNREPINSVLDPHYGV-G-RVIL 79 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEE------------------ECCSSCCSEECEECTTC-S-EEEE
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcE------------------eeecccccccccccCCC-C-eEEE
Confidence 45799999997 6788999887 999999998543210 112333 5777888886 5 7888
Q ss_pred EEeC---CCeEEEEECCC---CeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 121 TGSY---DHYVKVWDTNC---TRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 121 s~s~---D~~i~iWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
+++. +...++|.+.. +... .+.........+++++.. ..++++++.++ +.+||+++++.......+ . .
T Consensus 80 ~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~~~~~~~~s~dg~-~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-~--~ 153 (582)
T 3o4h_A 80 VRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVKPMRILSGVDTGE-AVVFTGATEDR-VALYALDGGGLRELARLP-G--F 153 (582)
T ss_dssp EEECSTTSCCEEEEEEETTSTTCCE-ECTTSCSBEEEEEEECSS-CEEEEEECSSC-EEEEEEETTEEEEEEEES-S--C
T ss_pred EeccCCCCcceEEEEEeccCCCccc-cccCCCCceeeeeCCCCC-eEEEEecCCCC-ceEEEccCCcEEEeecCC-C--c
Confidence 8776 56667765432 2222 222222233456666542 34555555554 559999998765544433 3 8
Q ss_pred EEEEecCCCeEEEEeeCC----CcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccc
Q 013274 195 TVEWSTSSEWILVTGGCD----GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRS 270 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~D----g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (446)
+++|+|++++ +++++.| +.|++||+.++....
T Consensus 154 ~~~~spDG~~-la~~~~~~~~~~~i~~~d~~~g~~~~------------------------------------------- 189 (582)
T 3o4h_A 154 GFVSDIRGDL-IAGLGFFGGGRVSLFTSNLSSGGLRV------------------------------------------- 189 (582)
T ss_dssp EEEEEEETTE-EEEEEEEETTEEEEEEEETTTCCCEE-------------------------------------------
T ss_pred eEEECCCCCE-EEEEEEcCCCCeEEEEEcCCCCCceE-------------------------------------------
Confidence 9999999996 5766666 789999987653210
Q ss_pred cCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC--cEEEEecCcCceeeeee
Q 013274 271 ANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS--RIRLWDVESGRNTLVNF 348 (446)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~--~i~lWd~~~~~~~~~~~ 348 (446)
...|.+.+..++|||||++|+++..|+ +|++||+.+++.. .+
T Consensus 190 ----------------------------------l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~--~~ 233 (582)
T 3o4h_A 190 ----------------------------------FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE--DL 233 (582)
T ss_dssp ----------------------------------ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE--EC
T ss_pred ----------------------------------eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE--Ec
Confidence 123445678899999999999888898 8999999987643 11
Q ss_pred eEEEeecCCCeEEE--------EcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCc
Q 013274 349 ETVRLQTSKPIQLA--------TTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQ 419 (446)
Q Consensus 349 ~~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~ 419 (446)
.. .......++ ++|++.++++.. ...+++|++ ++... .+.+.|.+++|| |++++++++.+.+
T Consensus 234 ~~---~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~s~~~~ 304 (582)
T 3o4h_A 234 EL---PSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSHTSLST 304 (582)
T ss_dssp CC---SCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEEEETTE
T ss_pred cC---CCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEEcCCCC
Confidence 11 011111223 889997666654 457899999 65544 345778999999 9999999888855
Q ss_pred ---EEEeCCCC
Q 013274 420 ---ILVWCPSR 427 (446)
Q Consensus 420 ---v~vW~~~~ 427 (446)
+.+|+..+
T Consensus 305 p~~l~~~d~~~ 315 (582)
T 3o4h_A 305 PPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEETTCC
T ss_pred CCeEEEEcCCC
Confidence 67777654
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=4.7e-19 Score=185.76 Aligned_cols=281 Identities=11% Similarity=0.052 Sum_probs=188.8
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccC---cCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRA---TDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
.|.+++||| ++++|++++. ++|.+||+.++ ... ....|...+.++.|+| |+++|+.
T Consensus 110 ~v~~~~~Sp-Dg~~l~~~~~-~~i~~~d~~~~~~~~~~------------------~l~~~~~~~~~~~~SP-DG~~la~ 168 (741)
T 2ecf_A 110 GIVDYQWSP-DAQRLLFPLG-GELYLYDLKQEGKAAVR------------------QLTHGEGFATDAKLSP-KGGFVSF 168 (741)
T ss_dssp ESCCCEECT-TSSEEEEEET-TEEEEEESSSCSTTSCC------------------BCCCSSSCEEEEEECT-TSSEEEE
T ss_pred CcceeEECC-CCCEEEEEeC-CcEEEEECCCCCcceEE------------------EcccCCcccccccCCC-CCCEEEE
Confidence 388999997 6888998886 99999999875 211 1235666788888887 8889998
Q ss_pred EeCCCeEEEEECCCCeeeEEEecCCc-----------------eEEeeeccCCCCceEEEEeeCCC--------------
Q 013274 122 GSYDHYVKVWDTNCTRVVMNFKMPGK-----------------VYRTAMSPLAASHMLIAAGTEDV-------------- 170 (446)
Q Consensus 122 ~s~D~~i~iWd~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~lasgs~d~-------------- 170 (446)
++. +.|.+||+.+++.......... ...+.++|++ ..|++++.|+
T Consensus 169 ~~~-~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg---~~l~~~~~d~~~~~~~~~~~~~p~ 244 (741)
T 2ecf_A 169 IRG-RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD---SAIAYARIDESPVPVQKRYEVYAD 244 (741)
T ss_dssp EET-TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS---SCEEEEEEECTTSCEEEEEEECSS
T ss_pred EeC-CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCC---CEEEEEEEcCCCCceEecCCCCCC
Confidence 885 5999999998876543222111 2456777754 3566665554
Q ss_pred -------------------cEEEEeCCC-Cceeeeee--CCCCCeEEEEEecCCCeEEEEee----CCCcEEEEEccCCc
Q 013274 171 -------------------QVRLCDIAS-GAISQTLS--GHRDGIMTVEWSTSSEWILVTGG----CDGAIRFWDIRRAG 224 (446)
Q Consensus 171 -------------------~v~vwd~~~-~~~~~~l~--~h~~~v~sv~~s~~~~~~l~S~s----~Dg~I~iWd~~~~~ 224 (446)
.|++||+++ ++...... .|...+.+++| |+++++++++. .+..|++||+.++.
T Consensus 245 ~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~ 323 (741)
T 2ecf_A 245 RTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ 323 (741)
T ss_dssp CEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC
T ss_pred cccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc
Confidence 789999998 87554433 47888999999 99997544433 35789999998766
Q ss_pred eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccc
Q 013274 225 CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDR 304 (446)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (446)
+...+.....
T Consensus 324 ~~~~~~~~~~---------------------------------------------------------------------- 333 (741)
T 2ecf_A 324 QRVLAHETSP---------------------------------------------------------------------- 333 (741)
T ss_dssp EEEEEEEECS----------------------------------------------------------------------
T ss_pred eEEEEEcCCC----------------------------------------------------------------------
Confidence 5433211000
Q ss_pred ccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEE-EEcCCCcEEE-EeCCC---ceE
Q 013274 305 ATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQL-ATTQDPAVVF-VPCMT---AVK 379 (446)
Q Consensus 305 ~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~---~~~ 379 (446)
+....+..++|+|||+++++++.|+.++||.+..... ...+ .........+ .+++++..++ .+..+ .++
T Consensus 334 --~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l---~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~ 407 (741)
T 2ecf_A 334 --TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAAL---THGNWSVDELLAVDEKAGLAYFRAGIESARESQ 407 (741)
T ss_dssp --SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEES---CCSSSCEEEEEEEETTTTEEEEEECSSCTTCBE
T ss_pred --CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeee---eecceEEEeEeEEeCCCCEEEEEEeCCCCceEE
Confidence 0001234578999999999999999988887653211 1111 1111122233 5889887654 44433 689
Q ss_pred EEEeec-CceEEEecccccceEEEEEcCCCCEEEEeeCC----CcEEEeCCCCC
Q 013274 380 AFDIWS-GKTCLTFRGHYEYVNCCCFSSQDQELYTGGND----RQILVWCPSRH 428 (446)
Q Consensus 380 ~~d~~~-~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D----~~v~vW~~~~~ 428 (446)
+|++.. ++....+.+ ...+.+++||||+++|+....+ ..+.+|+.++.
T Consensus 408 l~~~~~~g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~ 460 (741)
T 2ecf_A 408 IYAVPLQGGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE 460 (741)
T ss_dssp EEEEETTCCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC
T ss_pred EEEEEcCCCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC
Confidence 999874 565667766 6678999999999998854433 45788877644
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=3.2e-19 Score=185.98 Aligned_cols=328 Identities=11% Similarity=0.032 Sum_probs=179.6
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCC-CCCCccccccce---EEeccccccCccccEeEEEEeecCCcEEE
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDY-EGGGHIAKHRSV---FVVDKQHEHGHKYAISSAIWYPVDTGLFV 120 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~gh~~~V~~~~~~~~~~~~l~ 120 (446)
.++.+.|. +..+++++.|+ | +||+.+++.. . .+..+... +..+......+...|.++.++| ++ .++
T Consensus 27 ~~~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~~~---~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~sp-d~-~~~ 96 (706)
T 2z3z_A 27 YVVGLQWM---GDNYVFIEGDD-L-VFNKANGKSAQT---TRFSAADLNALMPEGCKFQTTDAFPSFRTLDAG-RG-LVV 96 (706)
T ss_dssp -CTTCEEE---TTEEEEEETTE-E-EEEC-------C---EEEEHHHHHTTC-----------CCCEEEEETT-TT-EEE
T ss_pred cCCCCcCc---CCeEEEEeCCc-E-EEECCCCcEeeE---EeechhHhhhhccchhccccccccCceeEEECC-CC-eEE
Confidence 36778886 34577788888 8 9999877531 0 00000000 0000000001124688888887 54 444
Q ss_pred EEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC-----CceeeeeeCCCCC---
Q 013274 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-----GAISQTLSGHRDG--- 192 (446)
Q Consensus 121 s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~-----~~~~~~l~~h~~~--- 192 (446)
.+ .|++|++||+.+++........+.+..++++|++ ..|+++ .|+.|++||+.+ ++.......+...
T Consensus 97 ~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG---~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 171 (706)
T 2z3z_A 97 LF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVG---DRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVY 171 (706)
T ss_dssp EE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTS---SEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEE
T ss_pred EE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCC---CEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEc
Confidence 44 3599999999988776555555556667787754 456664 579999999998 7765544444443
Q ss_pred -----------eEEEEEecCCCeEEEEeeC-CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCC
Q 013274 193 -----------IMTVEWSTSSEWILVTGGC-DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260 (446)
Q Consensus 193 -----------v~sv~~s~~~~~~l~S~s~-Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (446)
+.++.|+|++++ |++++. +..+..|.+.... .. .+... ......
T Consensus 172 g~~~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~------~~------~~~~~----~~~y~~------- 227 (706)
T 2z3z_A 172 GQAVHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYH------PL------EAESK----PLYYPM------- 227 (706)
T ss_dssp SSCCGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECC------SS------SCEEE----EECCCB-------
T ss_pred ccchhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccC------CC------CCceE----EeeCCC-------
Confidence 488999999997 455552 2222222211000 00 00000 000000
Q ss_pred cCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC-----cEEE
Q 013274 261 VKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS-----RIRL 335 (446)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~-----~i~l 335 (446)
.+.......+............+ .....|...+..++|+|||++|++++.|+ +|++
T Consensus 228 -----------~g~~~~~~~l~~~d~~~~~~~~~--------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~ 288 (706)
T 2z3z_A 228 -----------AGTPSHHVTVGIYHLATGKTVYL--------QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNA 288 (706)
T ss_dssp -----------TTSCCCEEEEEEEETTTTEEEEC--------CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred -----------CCCCCCeeEEEEEECCCCceEee--------ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEE
Confidence 00000000000000000000000 00113456689999999999999988886 8999
Q ss_pred EecCcCceeeeeeeEEEeec-CCCeEEEEcC--CCcEEEEeCC-CceEEEEee-cCceEEEecccccceEE-EEEcCCCC
Q 013274 336 WDVESGRNTLVNFETVRLQT-SKPIQLATTQ--DPAVVFVPCM-TAVKAFDIW-SGKTCLTFRGHYEYVNC-CCFSSQDQ 409 (446)
Q Consensus 336 Wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~-~~~~~~d~~-~~~~~~~l~gH~~~v~~-~~fSpd~~ 409 (446)
||+.+++............. .....++++| ++.+++++.. ...++|.+. +++....+..|...+.+ ++||||++
T Consensus 289 ~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 289 YDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGT 368 (706)
T ss_dssp EETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSS
T ss_pred EECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCC
Confidence 99998732211111100000 0123467888 8887776644 468899887 67788889999888877 89999999
Q ss_pred EEEEeeC-CC----cEEEeCCCCCCC
Q 013274 410 ELYTGGN-DR----QILVWCPSRHIS 430 (446)
Q Consensus 410 ~lvtgs~-D~----~v~vW~~~~~~~ 430 (446)
.|+.++. ++ .|..|++++...
T Consensus 369 ~l~~~~~~~~~~~~~l~~~d~~~~~~ 394 (706)
T 2z3z_A 369 RLYFESTEASPLERHFYCIDIKGGKT 394 (706)
T ss_dssp EEEEEESSSCTTCBEEEEEETTCCCC
T ss_pred EEEEEecCCCCceEEEEEEEcCCCCc
Confidence 8875544 44 555566665543
No 142
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=3.3e-19 Score=185.92 Aligned_cols=282 Identities=11% Similarity=0.057 Sum_probs=182.4
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
..|.+++|+|+ +. ++.+ .|++|++||+.++... . ...+...+.++.|+| ++++|+++
T Consensus 82 ~~v~~~~~spd-~~-~~~~-~~~~i~~~d~~~~~~~------------~------l~~~~~~~~~~~~Sp-dG~~la~~- 138 (706)
T 2z3z_A 82 FPSFRTLDAGR-GL-VVLF-TQGGLVGFDMLARKVT------------Y------LFDTNEETASLDFSP-VGDRVAYV- 138 (706)
T ss_dssp CCCEEEEETTT-TE-EEEE-ETTEEEEEETTTTEEE------------E------EECCTTCCTTCEECT-TSSEEEEE-
T ss_pred cCceeEEECCC-Ce-EEEE-ECCEEEEEECCCCceE------------E------ccCCcccccCCcCCC-CCCEEEEE-
Confidence 56999999985 54 4444 4599999999765321 0 112344566677876 88888885
Q ss_pred CCCeEEEEECCC-----CeeeEEEecCCc---------------eEEeeeccCCCCceEEEEee----------------
Q 013274 124 YDHYVKVWDTNC-----TRVVMNFKMPGK---------------VYRTAMSPLAASHMLIAAGT---------------- 167 (446)
Q Consensus 124 ~D~~i~iWd~~~-----~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~lasgs---------------- 167 (446)
.|++|++||+.+ ++.......... +..+.++|++ ..|++++
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg---~~la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG---SCLAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS---SEEEEEEEECTTSCCEEEEECCS
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC---CEEEEEEECCCCCceEEeeccCC
Confidence 679999999988 765442222211 2456677753 4666665
Q ss_pred -----------------CCCcEEEEeCCCCceeeee--eCCCCCeEEEEEecCCCeEEEEeeCCC-----cEEEEEccCC
Q 013274 168 -----------------EDVQVRLCDIASGAISQTL--SGHRDGIMTVEWSTSSEWILVTGGCDG-----AIRFWDIRRA 223 (446)
Q Consensus 168 -----------------~d~~v~vwd~~~~~~~~~l--~~h~~~v~sv~~s~~~~~~l~S~s~Dg-----~I~iWd~~~~ 223 (446)
.+..|++||+++++..... ..|...+.+++|+|++++ |++++.|+ .|++||+.++
T Consensus 216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g 294 (706)
T 2z3z_A 216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETG 294 (706)
T ss_dssp SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTC
T ss_pred CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCC
Confidence 4467999999998754433 257778999999999986 46666665 8999999876
Q ss_pred ceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccc
Q 013274 224 GCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQD 303 (446)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
.....+.....
T Consensus 295 ~~~~~~~~~~~--------------------------------------------------------------------- 305 (706)
T 2z3z_A 295 RFVRTLFVETD--------------------------------------------------------------------- 305 (706)
T ss_dssp CEEEEEEEEEC---------------------------------------------------------------------
T ss_pred ceeeEEEEccC---------------------------------------------------------------------
Confidence 33222110000
Q ss_pred cccccccCeEEEEEcc--CCCEEEEeecCCcEEEEecC-cCceeeeeeeEEEeecCCCeE-EEEcCCCcEEEEeC-CC--
Q 013274 304 RATAHYGAVTGLKVTE--DGMYLLSAGSDSRIRLWDVE-SGRNTLVNFETVRLQTSKPIQ-LATTQDPAVVFVPC-MT-- 376 (446)
Q Consensus 304 ~~~~h~~~v~~l~fs~--dg~~l~sgs~D~~i~lWd~~-~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~-- 376 (446)
......+..+.|+| ||++|++++.|+.++||++. ++.. .. .+......... +++++++..++..+ .+
T Consensus 306 --~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~-~~---~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 306 --KHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRL-IR---QVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp --SSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCE-EE---ECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred --CCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCE-EE---ecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 00001134568999 99999999999999999876 3321 11 11111111222 67889987665543 32
Q ss_pred -ceEEE--EeecCceEEEecccccceEEEEEcCCCCEEEEeeCC----CcEEEeCCCCCC
Q 013274 377 -AVKAF--DIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND----RQILVWCPSRHI 429 (446)
Q Consensus 377 -~~~~~--d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D----~~v~vW~~~~~~ 429 (446)
..++| ++.+++ ...+. |...+.+++||||+++|+....+ ..|.+|++.+..
T Consensus 380 ~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 380 LERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 24555 444444 33443 77889999999999998865443 459999987654
No 143
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.84 E-value=3.7e-18 Score=162.13 Aligned_cols=251 Identities=10% Similarity=0.120 Sum_probs=160.1
Q ss_pred ccEeEEEEeecCCcEEEEEeC--CCeEEEEECCCCee--eEEE-ecCCceEEeeeccCCCCceEEEEee-CCCcEEEEeC
Q 013274 104 YAISSAIWYPVDTGLFVTGSY--DHYVKVWDTNCTRV--VMNF-KMPGKVYRTAMSPLAASHMLIAAGT-EDVQVRLCDI 177 (446)
Q Consensus 104 ~~V~~~~~~~~~~~~l~s~s~--D~~i~iWd~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~lasgs-~d~~v~vwd~ 177 (446)
..+..++++| ++++++++.. ++.|.+||+.++.. +..+ ........++++++. .+|++++ .++.|.+||+
T Consensus 40 ~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg---~~l~~~~~~~~~v~v~~~ 115 (347)
T 3hfq_A 40 QNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEAR---QLVYSANYHKGTAEVMKI 115 (347)
T ss_dssp SCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTT---TEEEEEETTTTEEEEEEE
T ss_pred CCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCC---CEEEEEeCCCCEEEEEEe
Confidence 3455677776 7774444432 68999999977663 2222 123345667777753 3455554 7899999999
Q ss_pred CC-Cc--eeeeeeC---------CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCccccc
Q 013274 178 AS-GA--ISQTLSG---------HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKR 245 (446)
Q Consensus 178 ~~-~~--~~~~l~~---------h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (446)
+. +. .+..+.. +...+.+++|+|+++ ++++...++.|++||+...+.+.....
T Consensus 116 ~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~-------------- 180 (347)
T 3hfq_A 116 AADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSV-------------- 180 (347)
T ss_dssp CTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEEEEE--------------
T ss_pred CCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEEeee--------------
Confidence 63 32 2333321 123478899999998 778888899999999873221111000
Q ss_pred ceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEE
Q 013274 246 KVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL 325 (446)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~ 325 (446)
. . ......+..++|+|||++|+
T Consensus 181 --------------------------------------~--------~------------~~~g~~p~~~~~spdg~~l~ 202 (347)
T 3hfq_A 181 --------------------------------------L--------T------------MEAGFGPRHLVFSPDGQYAF 202 (347)
T ss_dssp --------------------------------------E--------E------------CCTTCCEEEEEECTTSSEEE
T ss_pred --------------------------------------E--------E------------cCCCCCCceEEECCCCCEEE
Confidence 0 0 00011356799999999654
Q ss_pred -EeecCCcEEEEecCcCceeeeeeeEEEeec------CCCeEEEEcCCCcEEEEe--CCCceEEEEeec-C--ceEEEec
Q 013274 326 -SAGSDSRIRLWDVESGRNTLVNFETVRLQT------SKPIQLATTQDPAVVFVP--CMTAVKAFDIWS-G--KTCLTFR 393 (446)
Q Consensus 326 -sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~-~--~~~~~l~ 393 (446)
++..++.|++|++......+.......... ..+..++++|++..+++. ....+.+|++.. + +.+..+.
T Consensus 203 v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 203 LAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE
T ss_pred EEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe
Confidence 467789999999875211111111111111 124568899999877554 346899999963 2 4456777
Q ss_pred ccccceEEEEEcCCCCEEEEeeC-CCcEEEe--CCCCCCCC
Q 013274 394 GHYEYVNCCCFSSQDQELYTGGN-DRQILVW--CPSRHISD 431 (446)
Q Consensus 394 gH~~~v~~~~fSpd~~~lvtgs~-D~~v~vW--~~~~~~~~ 431 (446)
.|...+.+++||||+++|++++. ++.|.+| +++++.+.
T Consensus 283 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 283 TEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred cCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 77778999999999998887765 4899999 66555543
No 144
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=1.1e-17 Score=158.00 Aligned_cols=279 Identities=11% Similarity=0.129 Sum_probs=175.1
Q ss_pred CCccceeEEEeecCCCCEEEEeeCC-CcEEEEEcc--cCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASD-SSVAVYDVQ--RATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~D-g~i~lWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
+|.+.+.+++|+| ++++|++++.+ +.|++|+++ ++.. ..+... ..+. .+..+.++| +++
T Consensus 35 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~----------~~~~~~-----~~~~-~~~~~~~s~-dg~ 96 (343)
T 1ri6_A 35 DVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGAL----------TFAAES-----ALPG-SLTHISTDH-QGQ 96 (343)
T ss_dssp ECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCE----------EEEEEE-----ECSS-CCSEEEECT-TSS
T ss_pred ecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCce----------eecccc-----ccCC-CCcEEEEcC-CCC
Confidence 5777899999997 57777777776 999999987 3221 001001 1122 566777776 677
Q ss_pred EEEEEe-CCCeEEEEECC---CCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC-Cceee----eeeC
Q 013274 118 LFVTGS-YDHYVKVWDTN---CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-GAISQ----TLSG 188 (446)
Q Consensus 118 ~l~s~s-~D~~i~iWd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~-~~~~~----~l~~ 188 (446)
++++++ .|+.|.+||+. ..+.+..+.....+..++++++.. .+++++..++.|++||+++ ++... .+..
T Consensus 97 ~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 174 (343)
T 1ri6_A 97 FVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNR--TLWVPALKQDRICLFTVSDDGHLVAQDPAEVTT 174 (343)
T ss_dssp EEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSS--EEEEEEGGGTEEEEEEECTTSCEEEEEEEEEEC
T ss_pred EEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCC--EEEEecCCCCEEEEEEecCCCceeeeccccccc
Confidence 666555 48999999994 334444444445566677777532 3444444889999999987 64432 2332
Q ss_pred -CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCc-eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCc
Q 013274 189 -HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAP 266 (446)
Q Consensus 189 -h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (446)
....+..++|+|+++++++++..++.|++||+.... .+.......
T Consensus 175 ~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~--------------------------------- 221 (343)
T 1ri6_A 175 VEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLD--------------------------------- 221 (343)
T ss_dssp STTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEE---------------------------------
T ss_pred CCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeecc---------------------------------
Confidence 345788999999999776777789999999985311 100000000
Q ss_pred cccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEE-EeecCCcEEEEecCc--Cce
Q 013274 267 QKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL-SAGSDSRIRLWDVES--GRN 343 (446)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~-sgs~D~~i~lWd~~~--~~~ 343 (446)
.... .......+..++|+|+|++|+ ++..|+.|++||+.. +..
T Consensus 222 --------------------------~~~~--------~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~ 267 (343)
T 1ri6_A 222 --------------------------MMPE--------NFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVL 267 (343)
T ss_dssp --------------------------CSCT--------TCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCE
T ss_pred --------------------------ccCc--------cccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCce
Confidence 0000 000123467899999998776 556899999999983 322
Q ss_pred eeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEee--cCce--EEEecccccceEEEEEcCCCCE
Q 013274 344 TLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIW--SGKT--CLTFRGHYEYVNCCCFSSQDQE 410 (446)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~--~~~~--~~~l~gH~~~v~~~~fSpd~~~ 410 (446)
.. +..... ...+..+++++++..+++++ ...+.+|++. +++. +..+... ....+++|.|+.+.
T Consensus 268 ~~--~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~g-~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 268 SK--EGFQPT-ETQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYAVG-QGPMWVVVNAHEGG 336 (343)
T ss_dssp EE--EEEEEC-SSSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEECS-SSCCEEEEEEEC--
T ss_pred EE--eeeecC-CCccceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccccC-CCCeeEEEEcccCC
Confidence 11 122221 22366789999999888776 3688999765 4533 3344442 45678889887654
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=5.5e-18 Score=159.61 Aligned_cols=239 Identities=8% Similarity=0.087 Sum_probs=168.2
Q ss_pred EeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce-eeeeeCC
Q 013274 111 WYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI-SQTLSGH 189 (446)
Q Consensus 111 ~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~-~~~l~~h 189 (446)
+.+.....+++++.+++|++||+++++.+..+........++++++. ..+++++..++.|++||+++++. ...+..+
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFVDTAITSDC--SNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEEEEEECSSS--CEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcceEEEcCCC--CEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 33334556889999999999999999988777654332377777753 24555666688999999999987 7777777
Q ss_pred CCCeEEEEEecCCCeEEEEeeCC-C--cEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCc
Q 013274 190 RDGIMTVEWSTSSEWILVTGGCD-G--AIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAP 266 (446)
Q Consensus 190 ~~~v~sv~~s~~~~~~l~S~s~D-g--~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (446)
..+..+++|+|+++++ +++..+ + .|++||+.+++....+.
T Consensus 83 ~~~~~~~~~s~dg~~l-~~~~~~~~~~~i~v~d~~~~~~~~~~~------------------------------------ 125 (331)
T 3u4y_A 83 QSSMADVDITPDDQFA-VTVTGLNHPFNMQSYSFLKNKFISTIP------------------------------------ 125 (331)
T ss_dssp SSCCCCEEECTTSSEE-EECCCSSSSCEEEEEETTTTEEEEEEE------------------------------------
T ss_pred CCCccceEECCCCCEE-EEecCCCCcccEEEEECCCCCeEEEEE------------------------------------
Confidence 7776669999999875 455555 3 89999998765433221
Q ss_pred cccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCc-EEEEecCcCcee
Q 013274 267 QKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSR-IRLWDVESGRNT 344 (446)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~-i~lWd~~~~~~~ 344 (446)
+.....+++|+|||++| +++..++. |++|++......
T Consensus 126 -----------------------------------------~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~ 164 (331)
T 3u4y_A 126 -----------------------------------------IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVL 164 (331)
T ss_dssp -----------------------------------------CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCE
T ss_pred -----------------------------------------CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcE
Confidence 01125789999999855 45566688 999998853221
Q ss_pred eeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEeecCce---EEEecccccceEEEEEcCCCCEEE-EeeCCC
Q 013274 345 LVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWSGKT---CLTFRGHYEYVNCCCFSSQDQELY-TGGNDR 418 (446)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~---~~~l~gH~~~v~~~~fSpd~~~lv-tgs~D~ 418 (446)
.............+..++++|++..+++.+ ...+.+||+.+++. ...+..+ ..+.+++|+|||++|+ +...++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~~~~ 243 (331)
T 3u4y_A 165 FDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTESTV 243 (331)
T ss_dssp EEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECSSEE
T ss_pred eecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEcCCC
Confidence 111011111123456788999998666553 45799999999888 7777755 5678999999999765 455688
Q ss_pred cEEEeCCCCCCC
Q 013274 419 QILVWCPSRHIS 430 (446)
Q Consensus 419 ~v~vW~~~~~~~ 430 (446)
.|.+|++.+...
T Consensus 244 ~i~~~d~~~~~~ 255 (331)
T 3u4y_A 244 DVFNFNQLSGTL 255 (331)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEECCCCce
Confidence 899999986654
No 146
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.83 E-value=2.1e-18 Score=187.56 Aligned_cols=277 Identities=12% Similarity=0.117 Sum_probs=200.1
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
+.+|.+.+.++.|++ + .++++++.|++++||.+...... . ....+|. .+....++| ++++
T Consensus 199 l~~~~~~v~~~~~s~-d-~l~~~~~~dg~~~l~~~~~~g~~-----~-----------~~l~~~~-~~~~~~~Sp-DG~~ 258 (1045)
T 1k32_A 199 IVDMSTHVSSPVIVG-H-RIYFITDIDGFGQIYSTDLDGKD-----L-----------RKHTSFT-DYYPRHLNT-DGRR 258 (1045)
T ss_dssp EECCSSCCEEEEEET-T-EEEEEECTTSSCEEEEEETTSCS-----C-----------EECCCCC-SSCEEEEEE-SSSC
T ss_pred CcCCCCcccceEEeC-C-EEEEEEeccCceEEEEEeCCCCc-----c-----------eEecCCC-CcceeeEcC-CCCE
Confidence 378999999999985 3 67788889999999987532110 0 0011232 244556666 7888
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEecC------------CceEEeeec-cCCCCceEEEEeeCCCcEEEEeCCCCceeee
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKMP------------GKVYRTAMS-PLAASHMLIAAGTEDVQVRLCDIASGAISQT 185 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~~------------~~~~~~~~~-~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~ 185 (446)
++.++ |+.|.+||+..... ..+... +.+..++++ |++ ..+++++ ++.|++|++.++... .
T Consensus 259 la~~~-~~~i~~~d~~~~~l-~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG---~~la~~~-~~~i~~~~~~~~~~~-~ 331 (1045)
T 1k32_A 259 ILFSK-GGSIYIFNPDTEKI-EKIEIGDLESPEDRIISIPSKFAEDFSPLDG---DLIAFVS-RGQAFIQDVSGTYVL-K 331 (1045)
T ss_dssp EEEEE-TTEEEEECTTTCCE-EECCCCCCCBCCSEEEECGGGGEEEEEECGG---GCEEEEE-TTEEEEECTTSSBEE-E
T ss_pred EEEEe-CCEEEEecCCceEe-eeeccCcccccccccccccccceeeecCCCC---CEEEEEE-cCEEEEEcCCCCceE-E
Confidence 88774 89999999954433 333321 145677787 753 3566665 789999999887644 4
Q ss_pred eeCCCC-CeEEEEEecCCCeEEEEeeCCCcEE-EEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCC
Q 013274 186 LSGHRD-GIMTVEWSTSSEWILVTGGCDGAIR-FWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKP 263 (446)
Q Consensus 186 l~~h~~-~v~sv~~s~~~~~~l~S~s~Dg~I~-iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (446)
+..|.+ .+..++|+ +++. |++++.++.+. +||+.++....
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~-l~~~s~~~~l~~~~d~~~~~~~~------------------------------------ 373 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVA-FIHGTREGDFLGIYDYRTGKAEK------------------------------------ 373 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEE-EEEEETTEEEEEEEETTTCCEEE------------------------------------
T ss_pred ccCCCcceEEeeeEc-CCCe-EEEEECCCceEEEEECCCCCceE------------------------------------
Confidence 667777 89999999 8875 57777777787 88876432100
Q ss_pred CCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCce
Q 013274 264 RAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRN 343 (446)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~ 343 (446)
..+|...+..++|+|||++|++++.|+.|++||+.+++.
T Consensus 374 -----------------------------------------l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~ 412 (1045)
T 1k32_A 374 -----------------------------------------FEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP 412 (1045)
T ss_dssp -----------------------------------------CCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred -----------------------------------------ecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCce
Confidence 013445688999999999999999999999999998754
Q ss_pred eeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-----------CceEEEEeecCceEEEecccccceEEEEEcCCCCEEE
Q 013274 344 TLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-----------TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv 412 (446)
... ...+......++++||+..++.... ..+.+||+.+++ ...+..|...+.+++|||||++|+
T Consensus 413 ~~~----~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~ 487 (1045)
T 1k32_A 413 TVI----ERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLY 487 (1045)
T ss_dssp EEE----EECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEE
T ss_pred EEe----ccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEE
Confidence 221 1112334466889999987766532 378999998877 778889999999999999999999
Q ss_pred EeeCCCcEEEeCCC
Q 013274 413 TGGNDRQILVWCPS 426 (446)
Q Consensus 413 tgs~D~~v~vW~~~ 426 (446)
.++.++..++|+..
T Consensus 488 ~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 488 YLSYRSLDPSPDRV 501 (1045)
T ss_dssp EEESCCCCCEECSS
T ss_pred EEecccCCcCcchh
Confidence 99999888888643
No 147
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.82 E-value=1e-17 Score=158.97 Aligned_cols=243 Identities=12% Similarity=0.074 Sum_probs=175.4
Q ss_pred cEeEEEEeecCCcEEEEEeC-------CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeC
Q 013274 105 AISSAIWYPVDTGLFVTGSY-------DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDI 177 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~-------D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~ 177 (446)
.+..+.++| +++++++++. +++|.+||+.+++.+..+........++++++. ..++++...++.|.+||+
T Consensus 42 ~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~v~~~~~~~v~~~d~ 118 (353)
T 3vgz_A 42 GAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTT--QTLWFGNTVNSAVTAIDA 118 (353)
T ss_dssp SEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTT--TEEEEEETTTTEEEEEET
T ss_pred CccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCC--CEEEEEecCCCEEEEEeC
Confidence 455667776 6777776663 578999999999988888776666667777643 346667777899999999
Q ss_pred CCCceeeeeeCCCCC---------eEEEEEecCCCeEEEEe-eCCCcEEEEEccCCceeEEeecccccccCCCcccccce
Q 013274 178 ASGAISQTLSGHRDG---------IMTVEWSTSSEWILVTG-GCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKV 247 (446)
Q Consensus 178 ~~~~~~~~l~~h~~~---------v~sv~~s~~~~~~l~S~-s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (446)
++++....+..+... +.+++|+|+++.+++++ +.++.|.+||+.+++....+.
T Consensus 119 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~----------------- 181 (353)
T 3vgz_A 119 KTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ----------------- 181 (353)
T ss_dssp TTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-----------------
T ss_pred CCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-----------------
Confidence 999988877765432 68899999998766555 358899999998765433221
Q ss_pred eeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe
Q 013274 248 SISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA 327 (446)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg 327 (446)
.+...+.+++|+|+|++|+++
T Consensus 182 -----------------------------------------------------------~~~~~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 182 -----------------------------------------------------------NTGKMSTGLALDSEGKRLYTT 202 (353)
T ss_dssp -----------------------------------------------------------CCCTTCCCCEEETTTTEEEEE
T ss_pred -----------------------------------------------------------CCCCccceEEECCCCCEEEEE
Confidence 011124557899999999999
Q ss_pred ecCCcEEEEecCcCceeeeeeeEEEe-ecCCCeEEEEcCCCcEEEEeCC--CceEEEEeecCceEEEecccccceEEEEE
Q 013274 328 GSDSRIRLWDVESGRNTLVNFETVRL-QTSKPIQLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFRGHYEYVNCCCF 404 (446)
Q Consensus 328 s~D~~i~lWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~gH~~~v~~~~f 404 (446)
+.++.|.+||+.+++.... +..... ....+..+++++++..+++... ..+.+||+.+++....+..+. ..+++|
T Consensus 203 ~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~~~~~ 279 (353)
T 3vgz_A 203 NADGELITIDTADNKILSR-KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SLAVLF 279 (353)
T ss_dssp CTTSEEEEEETTTTEEEEE-EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CCCEEE
T ss_pred cCCCeEEEEECCCCeEEEE-EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--CceEEE
Confidence 9999999999988753211 111000 1112345788999887776543 579999999998887776544 367999
Q ss_pred cCCCCEE-EEeeCCCcEEEeCCCCCC
Q 013274 405 SSQDQEL-YTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 405 Spd~~~l-vtgs~D~~v~vW~~~~~~ 429 (446)
+||+++| ++...++.|.+|++.+..
T Consensus 280 s~dg~~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 280 NPARNEAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTTE
T ss_pred CCCCCEEEEEECCCCeEEEEECCCCe
Confidence 9999965 455579999999997654
No 148
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.81 E-value=1.2e-17 Score=158.09 Aligned_cols=233 Identities=15% Similarity=0.160 Sum_probs=164.4
Q ss_pred cCCcEEEEEeCCCeEEEEECCCCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC--
Q 013274 114 VDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH-- 189 (446)
Q Consensus 114 ~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h-- 189 (446)
.++.++++++.|++|.+||+.+++.+..+.... ....++++++. ..+++++..++.|.+||+++++....+..+
T Consensus 9 ~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~ 86 (349)
T 1jmx_B 9 AGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDN--RTAYVLNNHYGDIYGIDLDTCKNTFHANLSSV 86 (349)
T ss_dssp TTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTS--SEEEEEETTTTEEEEEETTTTEEEEEEESCCS
T ss_pred CCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCC--CEEEEEeCCCCcEEEEeCCCCcEEEEEEcccc
Confidence 367789999999999999999999888887665 56677787753 345667777899999999999887776633
Q ss_pred ----CCCeEEEEEecCCCeEEEEeeCC------------CcEEEEEccCCceeEEeecccccccCCCcccccceeecccc
Q 013274 190 ----RDGIMTVEWSTSSEWILVTGGCD------------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSL 253 (446)
Q Consensus 190 ----~~~v~sv~~s~~~~~~l~S~s~D------------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (446)
...+..++|+|+++++ ++++.+ +.|.+||+.+++..+.+.
T Consensus 87 ~~~~~~~~~~~~~spdg~~l-~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~----------------------- 142 (349)
T 1jmx_B 87 PGEVGRSMYSFAISPDGKEV-YATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVR----------------------- 142 (349)
T ss_dssp TTEEEECSSCEEECTTSSEE-EEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSE-----------------------
T ss_pred cccccccccceEECCCCCEE-EEEcccccccccccccCCCeEEEEECCCccccceee-----------------------
Confidence 2337889999999875 555544 899999987542110000
Q ss_pred ccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcE
Q 013274 254 SAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRI 333 (446)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i 333 (446)
...+...+.+++|+|||+ ++.++. .|
T Consensus 143 ---------------------------------------------------~~~~~~~~~~~~~s~dg~-l~~~~~--~i 168 (349)
T 1jmx_B 143 ---------------------------------------------------TFPMPRQVYLMRAADDGS-LYVAGP--DI 168 (349)
T ss_dssp ---------------------------------------------------EEECCSSCCCEEECTTSC-EEEESS--SE
T ss_pred ---------------------------------------------------eccCCCcccceeECCCCc-EEEccC--cE
Confidence 001112367788999999 544433 49
Q ss_pred EEEecCcCceeeeeeeEE-------------------------------Eee----------------------------
Q 013274 334 RLWDVESGRNTLVNFETV-------------------------------RLQ---------------------------- 354 (446)
Q Consensus 334 ~lWd~~~~~~~~~~~~~~-------------------------------~~~---------------------------- 354 (446)
.+||+.+++.... +... ...
T Consensus 169 ~~~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (349)
T 1jmx_B 169 YKMDVKTGKYTVA-LPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHT 247 (349)
T ss_dssp EEECTTTCCEEEE-ECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEE
T ss_pred EEEeCCCCceecc-ccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEe
Confidence 9999887653211 1000 000
Q ss_pred ------cCCCeEEEEcC-CCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 355 ------TSKPIQLATTQ-DPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 355 ------~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
...+..+++++ ++..++++ ...+.+||+.+++....+..+ ..+.+++|+||+++|++++.++.|++|++.+
T Consensus 248 ~~~~~~~~~~~~~~~sp~dg~~l~~~-~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 248 QEFADLTELYFTGLRSPKDPNQIYGV-LNRLAKYDLKQRKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp EEEEECSSCEEEEEECSSCTTEEEEE-ESEEEEEETTTTEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred cccccCCCcceeeEecCCCCCEEEEE-cCeEEEEECccCeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 00122345668 88888777 778999999999887777643 3478999999999999889999999999986
Q ss_pred CC
Q 013274 428 HI 429 (446)
Q Consensus 428 ~~ 429 (446)
..
T Consensus 326 ~~ 327 (349)
T 1jmx_B 326 LE 327 (349)
T ss_dssp TE
T ss_pred cc
Confidence 54
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.81 E-value=1.5e-18 Score=170.13 Aligned_cols=203 Identities=11% Similarity=0.058 Sum_probs=142.6
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCC-----------e-----eeEEEecCCceEEeeeccCCCCceEEE----E
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT-----------R-----VVMNFKMPGKVYRTAMSPLAASHMLIA----A 165 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~-----------~-----~~~~~~~~~~~~~~~~~~~~~~~~~la----s 165 (446)
+..+++++ ++.++++++.|+ +++|+.... . ....+.+.+.+..++++++. .+|+ +
T Consensus 39 ~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg---~~lav~~~s 113 (434)
T 2oit_A 39 SSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDN---LTLSACMMS 113 (434)
T ss_dssp CBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTS---CEEEEEEEE
T ss_pred ccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCC---CEEEEEEec
Confidence 34456665 667899999887 999874210 1 11223345568888998853 4666 7
Q ss_pred eeCCCcEEEEeCCCC--------c---eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccc
Q 013274 166 GTEDVQVRLCDIASG--------A---ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQS 234 (446)
Q Consensus 166 gs~d~~v~vwd~~~~--------~---~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~ 234 (446)
|+.|+.|++||++++ + ....+.+|.+.|.+++|+|+...+|++++.||+|++||++++.+...
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~------ 187 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCA------ 187 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEE------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceee------
Confidence 889999999998764 1 14566789999999999998445689999999999999986532110
Q ss_pred cccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEE
Q 013274 235 QLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTG 314 (446)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 314 (446)
..+|...|++
T Consensus 188 ----------------------------------------------------------------------~~~~~~~v~~ 197 (434)
T 2oit_A 188 ----------------------------------------------------------------------TLPSTVAVTS 197 (434)
T ss_dssp ----------------------------------------------------------------------EECGGGCEEE
T ss_pred ----------------------------------------------------------------------ccCCCCceeE
Confidence 1246677999
Q ss_pred EEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecc
Q 013274 315 LKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG 394 (446)
Q Consensus 315 l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~g 394 (446)
++|+|+|++|++|+.|++|++||++ +... . ...... . .-..
T Consensus 198 v~wspdg~~lasgs~dg~v~iwd~~-~~~~-~---~~~~~~----------~------------------------~~~~ 238 (434)
T 2oit_A 198 VCWSPKGKQLAVGKQNGTVVQYLPT-LQEK-K---VIPCPP----------F------------------------YESD 238 (434)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTT-CCEE-E---EECCCT----------T------------------------CCTT
T ss_pred EEEcCCCCEEEEEcCCCcEEEEccC-Cccc-c---cccCCc----------c------------------------cCCC
Confidence 9999999999999999999999987 3211 0 000000 0 0013
Q ss_pred cccceEEEEEcCCCCEEEE-eeCCC------cEEEeCCCCC
Q 013274 395 HYEYVNCCCFSSQDQELYT-GGNDR------QILVWCPSRH 428 (446)
Q Consensus 395 H~~~v~~~~fSpd~~~lvt-gs~D~------~v~vW~~~~~ 428 (446)
|...|.+++|++++.++++ .+.|+ .+++|++.+.
T Consensus 239 ~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 239 HPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp SCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 5567999999999988864 33443 3899998743
No 150
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.80 E-value=1.2e-17 Score=153.66 Aligned_cols=225 Identities=8% Similarity=0.017 Sum_probs=163.9
Q ss_pred EEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC-CceeeeeeCC-CCCeEEEEE
Q 013274 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-GAISQTLSGH-RDGIMTVEW 198 (446)
Q Consensus 121 s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~-~~~~~~l~~h-~~~v~sv~~ 198 (446)
+++.|++|++||+.+++......+.+.+..+.++|+. .+|++++ ++.|++||+++ ++....+.+| ...+.+++|
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 92 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDG---KYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGI 92 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTS---SEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEE
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCC---CEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEE
Confidence 4578999999999999887767777778889998854 4677765 78999999999 8777666666 477899999
Q ss_pred ecCCCeEEEEee--CCCcEEEEEccCCc-eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCc
Q 013274 199 STSSEWILVTGG--CDGAIRFWDIRRAG-CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNG 275 (446)
Q Consensus 199 s~~~~~~l~S~s--~Dg~I~iWd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (446)
+|++++ |++++ .++.++||.+.... ....
T Consensus 93 spdg~~-l~~~~~~~~~~~~l~~~~~~~~~~~~----------------------------------------------- 124 (297)
T 2ojh_A 93 SPDGAL-YAISDKVEFGKSAIYLLPSTGGTPRL----------------------------------------------- 124 (297)
T ss_dssp CTTSSE-EEEEECTTTSSCEEEEEETTCCCCEE-----------------------------------------------
T ss_pred CCCCCE-EEEEEeCCCCcceEEEEECCCCceEE-----------------------------------------------
Confidence 999986 56666 44667777654210 0000
Q ss_pred eeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEE-EeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 276 VRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLL-SAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~-sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
..+...+..++|+|||++|+ +++.|+.+++|++........ .+...
T Consensus 125 ------------------------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~ 171 (297)
T 2ojh_A 125 ------------------------------MTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET---RLTHG 171 (297)
T ss_dssp ------------------------------CCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE---ECCCS
T ss_pred ------------------------------eecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcce---EcccC
Confidence 00112377889999999877 888999999998643211111 11111
Q ss_pred cCCCeEEEEcCCCcEEEEeC--CCceEEEEee-cCceEEEecccccceEEEEEcCCCCEEEEeeCC-----------CcE
Q 013274 355 TSKPIQLATTQDPAVVFVPC--MTAVKAFDIW-SGKTCLTFRGHYEYVNCCCFSSQDQELYTGGND-----------RQI 420 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~-~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D-----------~~v 420 (446)
......+.++|++..++..+ ...+++|++. ++.....+..|...+.+++|+||+++|++++.| ..|
T Consensus 172 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l 251 (297)
T 2ojh_A 172 EGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRV 251 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEE
T ss_pred CCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEE
Confidence 23445678899988766543 4678999987 667778899999999999999999999988876 569
Q ss_pred EEeCCCCCCC
Q 013274 421 LVWCPSRHIS 430 (446)
Q Consensus 421 ~vW~~~~~~~ 430 (446)
.+|++.+...
T Consensus 252 ~~~d~~~~~~ 261 (297)
T 2ojh_A 252 QLMDMDGGNV 261 (297)
T ss_dssp EEEETTSCSC
T ss_pred EEEecCCCCc
Confidence 9999986643
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.80 E-value=8.6e-18 Score=175.60 Aligned_cols=283 Identities=10% Similarity=0.026 Sum_probs=181.7
Q ss_pred eeEeCCCcc---ceeEEEeecCCCCEEEEeeCC---------CcEEEEEcccCcCCCCCCccccccceEEeccccccCcc
Q 013274 36 KEIVSPHKG---SINSLQVDLTEERYLLSGASD---------SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHK 103 (446)
Q Consensus 36 ~~~~~~H~~---~v~~l~~s~~~~~~l~s~s~D---------g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~ 103 (446)
..++.+|.. .|.+++||| +|++|++++.| +.|.+||++++.... + ....+|.
T Consensus 50 ~~~~~~~~~~~~~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~----l-----------~~~~~~~ 113 (723)
T 1xfd_A 50 TVLIEGKKIESLRAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS----L-----------DPPEVSN 113 (723)
T ss_dssp EEEECTTTTTTTTCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE----C-----------CCTTCCS
T ss_pred EEEeccccccccccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCceEe----c-----------cCCcccc
Confidence 445666665 499999997 68899999875 778899998764210 0 1112455
Q ss_pred ccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-C------------------ceEEeeeccCCCCceEEE
Q 013274 104 YAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-G------------------KVYRTAMSPLAASHMLIA 164 (446)
Q Consensus 104 ~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-~------------------~~~~~~~~~~~~~~~~la 164 (446)
..+..+.|+| |+++||.++. +.|++||+.+++........ . ....+.++|++ ..|+
T Consensus 114 ~~~~~~~~SP-dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg---~~la 188 (723)
T 1xfd_A 114 AKLQYAGWGP-KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG---TRLA 188 (723)
T ss_dssp CCCSBCCBCS-STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS---SEEE
T ss_pred ccccccEECC-CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC---CEEE
Confidence 5566777877 8889998886 79999999987765433321 1 12567788754 3566
Q ss_pred EeeCCC----------------------------------cEEEEeCCCCceeeeeeCC------CCCeEEEEEecCCCe
Q 013274 165 AGTEDV----------------------------------QVRLCDIASGAISQTLSGH------RDGIMTVEWSTSSEW 204 (446)
Q Consensus 165 sgs~d~----------------------------------~v~vwd~~~~~~~~~l~~h------~~~v~sv~~s~~~~~ 204 (446)
+++.|+ .|++||+.+++....+..| ...+.+++|+|+++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~ 268 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKV 268 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEE
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeE
Confidence 665432 7999999998866666654 677899999999985
Q ss_pred EEEEee----CCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecc
Q 013274 205 ILVTGG----CDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280 (446)
Q Consensus 205 ~l~S~s----~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (446)
+++.+ .+..|++||+.++++...+...
T Consensus 269 -l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~------------------------------------------------ 299 (723)
T 1xfd_A 269 -AVTWLNRAQNVSILTLCDATTGVCTKKHEDE------------------------------------------------ 299 (723)
T ss_dssp -EEEEEETTSCEEEEEEEETTTCCEEEEEEEE------------------------------------------------
T ss_pred -EEEEEcCCCCeEEEEEEeCCCCcceEEEEec------------------------------------------------
Confidence 44443 2367999999876544332100
Q ss_pred cceeecCCccccccCCCcccccccccccccCe----EEEEEccCCCEEEE--eecCC------cEEEEe-cCcCce-eee
Q 013274 281 VGRIPAKGSVRQRLHPGMLSSQDRATAHYGAV----TGLKVTEDGMYLLS--AGSDS------RIRLWD-VESGRN-TLV 346 (446)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v----~~l~fs~dg~~l~s--gs~D~------~i~lWd-~~~~~~-~~~ 346 (446)
|.+.+ ..++|+|||++|+. +..|+ .|.+|| ..++.. ...
T Consensus 300 ---------------------------~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (723)
T 1xfd_A 300 ---------------------------SEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ 352 (723)
T ss_dssp ---------------------------CSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred ---------------------------cCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence 00111 24679999997764 45666 566777 343320 011
Q ss_pred eeeEEEeecCCCe-EEEEcCCCcEEEEe-CC---CceEEEEeecCc--eEEEecc---cccceEEEEEcCCCCEEEE-ee
Q 013274 347 NFETVRLQTSKPI-QLATTQDPAVVFVP-CM---TAVKAFDIWSGK--TCLTFRG---HYEYVNCCCFSSQDQELYT-GG 415 (446)
Q Consensus 347 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~---~~~~~~d~~~~~--~~~~l~g---H~~~v~~~~fSpd~~~lvt-gs 415 (446)
.+. ....... .+++++++..++.. .. ...++|++.... ....+.+ |...+..++||||+++|+. ++
T Consensus 353 ~l~---~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 353 SIT---SGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp BSC---CSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred Eee---cCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 111 0011112 25789998877543 33 468899986432 3344554 7788999999999998774 44
Q ss_pred CCC
Q 013274 416 NDR 418 (446)
Q Consensus 416 ~D~ 418 (446)
.+.
T Consensus 430 ~~~ 432 (723)
T 1xfd_A 430 GPG 432 (723)
T ss_dssp SSS
T ss_pred CCC
Confidence 443
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.80 E-value=2.7e-18 Score=168.35 Aligned_cols=171 Identities=13% Similarity=0.153 Sum_probs=123.9
Q ss_pred ccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEE--
Q 013274 43 KGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV-- 120 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~-- 120 (446)
...++.|++++ .+.+|++++.|+ |+||+............ ....+..........|...|.++.|++ ++++|+
T Consensus 36 ~~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~~l~~sp-dg~~lav~ 110 (434)
T 2oit_A 36 KERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGD--DPNKIVDKVQGLLVPMKFPIHHLALSC-DNLTLSAC 110 (434)
T ss_dssp CSCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTC--CTTCEEECCCCEEECCSSCEEEEEECT-TSCEEEEE
T ss_pred CCCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhccccc--CcccccccCccccccCCCcccEEEEcC-CCCEEEEE
Confidence 45689999997 466898998888 99998753321100000 000000000001124667899999987 778888
Q ss_pred --EEeCCCeEEEEECCCC--------eeeEEEe----cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee
Q 013274 121 --TGSYDHYVKVWDTNCT--------RVVMNFK----MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL 186 (446)
Q Consensus 121 --s~s~D~~i~iWd~~~~--------~~~~~~~----~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l 186 (446)
+|+.|++|++||+.++ +.+..+. +.+.+..+++++.. ..+|++++.|+.|++||++++......
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~--~~~las~s~Dg~v~iwD~~~~~~~~~~ 188 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV--PSMVAVCLADGSIAVLQVTETVKVCAT 188 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC--TTEEEEEETTSCEEEEEESSSEEEEEE
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC--CCEEEEEECCCeEEEEEcCCCcceeec
Confidence 8999999999998654 2222222 24568889998853 358999999999999999999777777
Q ss_pred eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 187 SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 187 ~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
.+|...|.+++|+|++++ |++|+.||+|++||++
T Consensus 189 ~~~~~~v~~v~wspdg~~-lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQ-LAVGKQNGTVVQYLPT 222 (434)
T ss_dssp ECGGGCEEEEEECTTSSC-EEEEETTSCEEEECTT
T ss_pred cCCCCceeEEEEcCCCCE-EEEEcCCCcEEEEccC
Confidence 789999999999999886 7899999999999987
No 153
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=1.3e-16 Score=152.41 Aligned_cols=251 Identities=10% Similarity=0.041 Sum_probs=158.1
Q ss_pred ccEeEEEEeecCCcEEEEEeCC----CeEEEEECCC--Cee--eEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEE
Q 013274 104 YAISSAIWYPVDTGLFVTGSYD----HYVKVWDTNC--TRV--VMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRL 174 (446)
Q Consensus 104 ~~V~~~~~~~~~~~~l~s~s~D----~~i~iWd~~~--~~~--~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~v 174 (446)
..+..+.++| ++++|++++.+ +.|.+|+++. ++. +...... .....+++ .+..++++...++.|.+
T Consensus 50 ~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~~ 124 (361)
T 3scy_A 50 ANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT----NGKNIVTANYSGGSITV 124 (361)
T ss_dssp SCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE----CSSEEEEEETTTTEEEE
T ss_pred CCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE----CCCEEEEEECCCCEEEE
Confidence 3444567776 78889988886 8999998865 443 2222222 23344444 23345555557889999
Q ss_pred EeCCCCceeeee------eC--------CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCce------eEEeecccc
Q 013274 175 CDIASGAISQTL------SG--------HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGC------FRVLDQSQS 234 (446)
Q Consensus 175 wd~~~~~~~~~l------~~--------h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~------~~~~~~~~~ 234 (446)
|++.....+..+ .+ +...+.+++|+|++++++++...++.|++|++..... +.....
T Consensus 125 ~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~--- 201 (361)
T 3scy_A 125 FPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT--- 201 (361)
T ss_dssp EEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE---
T ss_pred EEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc---
Confidence 999754322211 11 1233578999999998777777789999999864321 000000
Q ss_pred cccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEE
Q 013274 235 QLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTG 314 (446)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 314 (446)
... ....+...+..
T Consensus 202 ----------------------------------------------~~~--------------------~~~~~~~~~~~ 215 (361)
T 3scy_A 202 ----------------------------------------------PEA--------------------FKVAPGSGPRH 215 (361)
T ss_dssp ----------------------------------------------EEE--------------------EECCTTCCEEE
T ss_pred ----------------------------------------------ccc--------------------eecCCCCCCeE
Confidence 000 00011223678
Q ss_pred EEEccCCCEEEEee-cCCcEEEEecCcCceeeeeeeEEEee---cCCCeEEEEcCCCcEEEEeC---CCceEEEEee--c
Q 013274 315 LKVTEDGMYLLSAG-SDSRIRLWDVESGRNTLVNFETVRLQ---TSKPIQLATTQDPAVVFVPC---MTAVKAFDIW--S 385 (446)
Q Consensus 315 l~fs~dg~~l~sgs-~D~~i~lWd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~~--~ 385 (446)
++|+|||++|+.++ .+++|.+||+.+++... ....... ...+..++++|++..+++.. ...+.+|++. +
T Consensus 216 ~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~--~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~ 293 (361)
T 3scy_A 216 LIFNSDGKFAYLINEIGGTVIAFRYADGMLDE--IQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN 293 (361)
T ss_dssp EEECTTSSEEEEEETTTCEEEEEEEETTEEEE--EEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT
T ss_pred EEEcCCCCEEEEEcCCCCeEEEEEecCCceEE--eEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC
Confidence 99999999876666 68999999998664221 1111111 12345788999999876653 3579999995 4
Q ss_pred Cc--eEEEecccccceEEEEEcCCCCEEEEee-CCCcEEEe--CCCCCCCC
Q 013274 386 GK--TCLTFRGHYEYVNCCCFSSQDQELYTGG-NDRQILVW--CPSRHISD 431 (446)
Q Consensus 386 ~~--~~~~l~gH~~~v~~~~fSpd~~~lvtgs-~D~~v~vW--~~~~~~~~ 431 (446)
++ .+..+.. ...+.+++|||||++|++++ .++.|.+| ++.++.+.
T Consensus 294 g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~ 343 (361)
T 3scy_A 294 GTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLT 343 (361)
T ss_dssp CCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEe
Confidence 44 3344554 55788999999999888776 67999996 55555443
No 154
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.78 E-value=3.4e-17 Score=157.72 Aligned_cols=287 Identities=11% Similarity=0.050 Sum_probs=174.5
Q ss_pred eCCCccceeE-----EEeecCCCCEEEEeeC-CCc--EEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEE
Q 013274 39 VSPHKGSINS-----LQVDLTEERYLLSGAS-DSS--VAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAI 110 (446)
Q Consensus 39 ~~~H~~~v~~-----l~~s~~~~~~l~s~s~-Dg~--i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~ 110 (446)
++.|.+.+.. .+|+| +|++|+.++. |+. |.+||+.++... +...+|...+....
T Consensus 26 lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~-----------------~lt~~~~~~~~~~~ 87 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVAT-----------------QLTEGRGDNTFGGF 87 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEE-----------------ECCCSSCBCSSSCE
T ss_pred ecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceE-----------------EeeeCCCCCccceE
Confidence 4566655555 78997 6788888877 774 777787765321 11123443333445
Q ss_pred EeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCce-EEeee--ccCCCCceEEEE----------------------
Q 013274 111 WYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAM--SPLAASHMLIAA---------------------- 165 (446)
Q Consensus 111 ~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~las---------------------- 165 (446)
|+| +++.|+.++.++.|.+||+.+++....+..+... ....+ .+ +..+++.
T Consensus 88 ~sp-dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~---dg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 163 (388)
T 3pe7_A 88 LSP-DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANS---DCTKLVGIEIRREDWVPLTDWKKFHEFYF 163 (388)
T ss_dssp ECT-TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECT---TSSEEEEEEEEGGGCCCCCSHHHHHHHGG
T ss_pred EcC-CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECC---CCCeeccccccCcccccccccchhhhhhc
Confidence 666 8899999999999999999998876655554432 11222 33 2234442
Q ss_pred eeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEec-CCCeEEEEeeCC------CcEEEEEccCCceeEEeecccccccC
Q 013274 166 GTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWST-SSEWILVTGGCD------GAIRFWDIRRAGCFRVLDQSQSQLGR 238 (446)
Q Consensus 166 gs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~-~~~~~l~S~s~D------g~I~iWd~~~~~~~~~~~~~~~~~~~ 238 (446)
...+..|++||+.+++. ..+..+...+..+.|+| +++.+ +.++.+ ..|.++|+..+.. +.+
T Consensus 164 ~~~~~~l~~~d~~~g~~-~~l~~~~~~~~~~~~sp~dg~~l-~~~~~~~~~~~~~~l~~~d~~~~~~-~~l--------- 231 (388)
T 3pe7_A 164 TKPCCRLMRVDLKTGES-TVILQENQWLGHPIYRPYDDSTV-AFCHEGPHDLVDARMWLINEDGTNM-RKV--------- 231 (388)
T ss_dssp GCCCEEEEEEETTTCCE-EEEEEESSCEEEEEEETTEEEEE-EEEECSCTTTSSCSEEEEETTSCCC-EES---------
T ss_pred cCCcceEEEEECCCCce-EEeecCCccccccEECCCCCCEE-EEEEecCCCCCcceEEEEeCCCCce-EEe---------
Confidence 22456899999999864 44455677889999999 88764 444432 2566666543210 000
Q ss_pred CCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccc-cCeEEEEE
Q 013274 239 RPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY-GAVTGLKV 317 (446)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~f 317 (446)
. ..+. ..+..+.|
T Consensus 232 --------------------------------------------------------~----------~~~~~~~~~~~~~ 245 (388)
T 3pe7_A 232 --------------------------------------------------------K----------THAEGESCTHEFW 245 (388)
T ss_dssp --------------------------------------------------------C----------CCCTTEEEEEEEE
T ss_pred --------------------------------------------------------e----------eCCCCcccccceE
Confidence 0 0001 13667889
Q ss_pred ccCCCEEEEeec--CC---cEEEEecCcCceeee-eeeEEEeecCCCeEEEEcCCCcEEEEe----------CCCceEEE
Q 013274 318 TEDGMYLLSAGS--DS---RIRLWDVESGRNTLV-NFETVRLQTSKPIQLATTQDPAVVFVP----------CMTAVKAF 381 (446)
Q Consensus 318 s~dg~~l~sgs~--D~---~i~lWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~ 381 (446)
+|||+.|+..+. ++ .|.+||+.+++.... .+.............+++|++..++.. ....+.+|
T Consensus 246 spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~ 325 (388)
T 3pe7_A 246 VPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVF 325 (388)
T ss_dssp CTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEE
T ss_pred CCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEE
Confidence 999997755443 22 399999998764322 111100000001112466776655432 23468889
Q ss_pred EeecCceEEEeccccc-----------ceEEEEEcCCCCEEEEee-CCCcEEEeCCC
Q 013274 382 DIWSGKTCLTFRGHYE-----------YVNCCCFSSQDQELYTGG-NDRQILVWCPS 426 (446)
Q Consensus 382 d~~~~~~~~~l~gH~~-----------~v~~~~fSpd~~~lvtgs-~D~~v~vW~~~ 426 (446)
|+.+++. ..+..|.. .+.+++|||||++|+.++ .++...||..+
T Consensus 326 d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~ 381 (388)
T 3pe7_A 326 NMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLAT 381 (388)
T ss_dssp ETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred eccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEE
Confidence 9877654 56666766 578999999999888655 57888888654
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.77 E-value=5.1e-17 Score=152.90 Aligned_cols=224 Identities=11% Similarity=0.092 Sum_probs=159.1
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEecCC---ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC-C---
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPG---KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG-H--- 189 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~-h--- 189 (446)
+++++++.|++|.+||+.+++.+..+...+ ....++++++. ..+++++..++.|.+||+.+++....+.. +
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~ 79 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGG--RIAYATVNKSESLVKIDLVTGETLGRIDLSTPEE 79 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTS--SEEEEEETTTTEEEEEETTTCCEEEEEECCBTTE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCC--CEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccc
Confidence 478999999999999999999988887666 56777888753 24667777789999999999988776653 2
Q ss_pred -CCCeEEEEEecCCCeEEEEee------------CCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccC
Q 013274 190 -RDGIMTVEWSTSSEWILVTGG------------CDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAG 256 (446)
Q Consensus 190 -~~~v~sv~~s~~~~~~l~S~s------------~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (446)
...+..++|+|+++++ ++++ .++.|.+||+.+++....+..
T Consensus 80 ~~~~~~~~~~s~dg~~l-~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~------------------------- 133 (337)
T 1pby_B 80 RVKSLFGAALSPDGKTL-AIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA------------------------- 133 (337)
T ss_dssp EEECTTCEEECTTSSEE-EEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-------------------------
T ss_pred ccccccceEECCCCCEE-EEEecccccccccccccCceEEEEECCCCcEEEEEeC-------------------------
Confidence 2267789999999875 4443 579999999976543322210
Q ss_pred CCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEE
Q 013274 257 QNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLW 336 (446)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lW 336 (446)
...+.+++|+|||++|+++ ++.|++|
T Consensus 134 ----------------------------------------------------~~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 134 ----------------------------------------------------PRQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp ----------------------------------------------------CSSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ----------------------------------------------------CCCcceeEECCCCCEEEEe--CCeEEEE
Confidence 1124567899999988877 6889999
Q ss_pred ecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCC-------------------------ceEEEEeecCceE-E
Q 013274 337 DVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT-------------------------AVKAFDIWSGKTC-L 390 (446)
Q Consensus 337 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~d~~~~~~~-~ 390 (446)
|+.+++... ...... ......+++++..++..... .+.+||+.+++.. .
T Consensus 160 d~~~~~~~~----~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 160 DPEAGTLVE----DKPIQS-WEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp ETTTTEEEE----EECSTT-TTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred ECCCCcEee----eeeccc-cCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 998875321 111111 01112445555544332211 3578888887764 3
Q ss_pred EecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 391 TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 391 ~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+..|...+.+++|+||+++|+++ |+.|.+|++.+..
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~ 271 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNA 271 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCc
Confidence 456677788999999999999988 7999999997653
No 156
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.77 E-value=1.8e-17 Score=168.97 Aligned_cols=231 Identities=11% Similarity=0.050 Sum_probs=160.3
Q ss_pred cccEeEEEEeecCCcEEEEEeC-CCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeC---CCcEEEEeC
Q 013274 103 KYAISSAIWYPVDTGLFVTGSY-DHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTE---DVQVRLCDI 177 (446)
Q Consensus 103 ~~~V~~~~~~~~~~~~l~s~s~-D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~---d~~v~vwd~ 177 (446)
...|.++.++| ||++||+++. |++++||+++++...+..... ..+...+++|+ .++++++. +...++|.+
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd----~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG----RVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS----EEEEEEECSTTSCCEEEEEE
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC----eEEEEeccCCCCcceEEEEE
Confidence 45688888887 8999998887 999999999776654433333 34566677764 46666554 455566554
Q ss_pred CC---CceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccc
Q 013274 178 AS---GAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254 (446)
Q Consensus 178 ~~---~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (446)
+. +... .+..+. .+...+|+|+++.++++.+.++.+.+||+.++++.+..
T Consensus 96 ~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~------------------------- 148 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA------------------------- 148 (582)
T ss_dssp ETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-------------------------
T ss_pred eccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-------------------------
Confidence 33 2222 333222 34466888888654444444455569998765432111
Q ss_pred cCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecC----
Q 013274 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSD---- 330 (446)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D---- 330 (446)
.+.. .+++|||||++|++++.|
T Consensus 149 ----------------------------------------------------~~~~--~~~~~spDG~~la~~~~~~~~~ 174 (582)
T 3o4h_A 149 ----------------------------------------------------RLPG--FGFVSDIRGDLIAGLGFFGGGR 174 (582)
T ss_dssp ----------------------------------------------------EESS--CEEEEEEETTEEEEEEEEETTE
T ss_pred ----------------------------------------------------cCCC--ceEEECCCCCEEEEEEEcCCCC
Confidence 1111 567899999999988887
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-C--ceEEEEeecCceEEEecccccceEEEE----
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-T--AVKAFDIWSGKTCLTFRGHYEYVNCCC---- 403 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~d~~~~~~~~~l~gH~~~v~~~~---- 403 (446)
..|++||+.+++... +.........++++||+..++.... . .+.+||+.+++.. .+.+|...+..++
T Consensus 175 ~~i~~~d~~~g~~~~-----l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~ 248 (582)
T 3o4h_A 175 VSLFTSNLSSGGLRV-----FDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAI 248 (582)
T ss_dssp EEEEEEETTTCCCEE-----ECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEE
T ss_pred eEEEEEcCCCCCceE-----eecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccc
Confidence 789999998875421 1112233456889999998885433 3 6888999888877 8889988888888
Q ss_pred ----EcCCCCEEEEeeCCCcEEEeCC
Q 013274 404 ----FSSQDQELYTGGNDRQILVWCP 425 (446)
Q Consensus 404 ----fSpd~~~lvtgs~D~~v~vW~~ 425 (446)
|||||+++++++.|++++||.+
T Consensus 249 ~~~~~spdg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 249 TWLGYLPDGRLAVVARREGRSAVFID 274 (582)
T ss_dssp EEEEECTTSCEEEEEEETTEEEEEET
T ss_pred cceeEcCCCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999999998
No 157
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.77 E-value=1.3e-15 Score=145.31 Aligned_cols=271 Identities=11% Similarity=0.133 Sum_probs=167.6
Q ss_pred CccceeEEEeecCCCCEEEEeeCC----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 42 HKGSINSLQVDLTEERYLLSGASD----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~D----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
|......|+|+| ++++|++++.+ +.|.+|+++.... .+ ..+.. ...+......+.+ +++
T Consensus 48 ~~~~p~~l~~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g-----~~---~~~~~-----~~~~~~~p~~~~~---dg~ 110 (361)
T 3scy_A 48 EVANPSYLIPSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKG-----TL---HLLNT-----QKTMGADPCYLTT---NGK 110 (361)
T ss_dssp ECSCCCSEEECT-TSSEEEEEECCSSTTCEEEEEEEETTTT-----EE---EEEEE-----EECSSSCEEEEEE---CSS
T ss_pred cCCCCceEEECC-CCCEEEEEEccCCCCCcEEEEEEeCCCC-----cE---EEeeE-----eccCCCCcEEEEE---CCC
Confidence 566778899997 57888888886 7999999864210 00 00000 0112223434444 667
Q ss_pred EEEEEe-CCCeEEEEECCCCeeeE----EEecC-----------CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc
Q 013274 118 LFVTGS-YDHYVKVWDTNCTRVVM----NFKMP-----------GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181 (446)
Q Consensus 118 ~l~s~s-~D~~i~iWd~~~~~~~~----~~~~~-----------~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~ 181 (446)
++++++ .+++|.+|++.....+. ..... .+.+.++++|+. ..++++...++.|++|+++...
T Consensus 111 ~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg--~~l~~~~~~~~~v~v~~~~~~~ 188 (361)
T 3scy_A 111 NIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG--KYLLADDLGTDQIHKFNINPNA 188 (361)
T ss_dssp EEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS--SEEEEEETTTTEEEEEEECTTC
T ss_pred EEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC--CEEEEEeCCCCEEEEEEEcCCC
Confidence 776666 58899999997533221 11111 124667888753 2355666668899999987543
Q ss_pred e------e-------eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCccccccee
Q 013274 182 I------S-------QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVS 248 (446)
Q Consensus 182 ~------~-------~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (446)
. + .....+......++|+|++++++++...++.|.+||+.++... .+....
T Consensus 189 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~-~~~~~~--------------- 252 (361)
T 3scy_A 189 NADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLD-EIQTVA--------------- 252 (361)
T ss_dssp CTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEE-EEEEEE---------------
T ss_pred CcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceE-EeEEEe---------------
Confidence 1 1 1122345567899999999876566557899999998754321 110000
Q ss_pred eccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEee
Q 013274 249 ISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAG 328 (446)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs 328 (446)
....+......++|+|||++|+++.
T Consensus 253 -------------------------------------------------------~~~~~~~~~~~i~~spdg~~l~v~~ 277 (361)
T 3scy_A 253 -------------------------------------------------------ADTVNAQGSGDIHLSPDGKYLYASN 277 (361)
T ss_dssp -------------------------------------------------------SCSSCCCCEEEEEECTTSSEEEEEE
T ss_pred -------------------------------------------------------cCCCCCCCcccEEECCCCCEEEEEC
Confidence 0011223357899999999886655
Q ss_pred c--CCcEEEEecC--cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEee--cCceEEEe-cccccce
Q 013274 329 S--DSRIRLWDVE--SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIW--SGKTCLTF-RGHYEYV 399 (446)
Q Consensus 329 ~--D~~i~lWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~--~~~~~~~l-~gH~~~v 399 (446)
. +++|++|++. +++... ...... ...+..++++|++..++++. ...+.+|.+. ++++.... ..|...+
T Consensus 278 ~~~~~~i~v~~~~~~~g~~~~--~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p 354 (361)
T 3scy_A 278 RLKADGVAIFKVDETNGTLTK--VGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKP 354 (361)
T ss_dssp CSSSCEEEEEEECTTTCCEEE--EEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSE
T ss_pred CCCCCEEEEEEEcCCCCcEEE--eeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCC
Confidence 4 5899999996 333221 122222 33566789999999877765 3578887654 56654433 3466789
Q ss_pred EEEEEc
Q 013274 400 NCCCFS 405 (446)
Q Consensus 400 ~~~~fS 405 (446)
.|++|.
T Consensus 355 ~~v~~~ 360 (361)
T 3scy_A 355 VCLKFV 360 (361)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 999996
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.77 E-value=6.7e-18 Score=176.41 Aligned_cols=316 Identities=13% Similarity=0.080 Sum_probs=179.3
Q ss_pred eEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc---cEeEEEEeecCCcEEEEEe
Q 013274 47 NSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY---AISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 47 ~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~~~~~~~~~~~l~s~s 123 (446)
.+++|+| +++++++ +.|++|++||+.++... .+. .+|.. .+.++.++| |+++|++++
T Consensus 19 ~~~~~s~-dg~~~~~-~~d~~i~~~~~~~g~~~------------~~~-----~~~~~~~~~~~~~~~Sp-Dg~~la~~~ 78 (719)
T 1z68_A 19 FFPNWIS-GQEYLHQ-SADNNIVLYNIETGQSY------------TIL-----SNRTMKSVNASNYGLSP-DRQFVYLES 78 (719)
T ss_dssp CCCEESS-SSEEEEE-CTTSCEEEEESSSCCEE------------EEE-----CHHHHHTTTCSEEEECT-TSSEEEEEE
T ss_pred CccEECC-CCeEEEE-cCCCCEEEEEcCCCcEE------------EEE-----ccccccccceeeEEECC-CCCeEEEEe
Confidence 3778987 5665555 46999999999876421 011 12322 377888887 899999887
Q ss_pred C---------CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee-eCCCCCe
Q 013274 124 Y---------DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL-SGHRDGI 193 (446)
Q Consensus 124 ~---------D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l-~~h~~~v 193 (446)
. |++|++||+++++.+....+.+.+..++++|++ ..||+++ ++.|++||+.++...... .++...|
T Consensus 79 ~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG---~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v 154 (719)
T 1z68_A 79 DYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVG---SKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKI 154 (719)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSST---TCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTE
T ss_pred cCceeEEeecceEEEEEECCCCccccceecCcccccceECCCC---CEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCe
Confidence 6 799999999998873222334556678888865 3566665 789999999988764432 2333322
Q ss_pred -----------------EEEEEecCCCeEEEEeeCC-CcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 194 -----------------MTVEWSTSSEWILVTGGCD-GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 194 -----------------~sv~~s~~~~~~l~S~s~D-g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
.+++|+|++++ |++++.| +.+++|.+.... ... .+.. ..+.... .
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~------~~~-----~~~~----~~~~yp~-~ 217 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYG------DEQ-----YPRT----INIPYPK-A 217 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECC------SSS-----SCEE----EEEECCB-T
T ss_pred EcccccceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccC------CCC-----Cccc----eeecCCC-C
Confidence 48999999997 5666544 556666542110 000 0000 0000000 0
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCcccc-ccCCCcccccccccccccCeEEEEEccCCCEEEEeecC----
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQ-RLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSD---- 330 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D---- 330 (446)
... . ...........+.... .. .+.......+|...+..++|||||+++++....
T Consensus 218 g~~-------------~----~~~~l~~~d~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~ 277 (719)
T 1z68_A 218 GAK-------------N----PVVRIFIIDTTYPAYVGPQ---EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNV 277 (719)
T ss_dssp TSC-------------C----CEEEEEEEESSCHHHHCCE---ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTE
T ss_pred CCC-------------C----CeeEEEEEECCCCCcccee---EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCe
Confidence 000 0 0000000000000000 00 000000123567779999999999877774433
Q ss_pred CcEEEEe----cCcCceeeeeeeEE-EeecCCCe-----EEEEcCCCcEEEE--eC-CC--ceEEEEeecCceEEEeccc
Q 013274 331 SRIRLWD----VESGRNTLVNFETV-RLQTSKPI-----QLATTQDPAVVFV--PC-MT--AVKAFDIWSGKTCLTFRGH 395 (446)
Q Consensus 331 ~~i~lWd----~~~~~~~~~~~~~~-~~~~~~~~-----~~~~~~~~~~~~~--~~-~~--~~~~~d~~~~~~~~~l~gH 395 (446)
..|.+|| +.+++.... +... ........ .++++|++..++. .. .. .+.+|++.+++ ...+..+
T Consensus 278 ~~l~~~d~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~ 355 (719)
T 1z68_A 278 SVLSICDFREDWQTWDCPKT-QEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSG 355 (719)
T ss_dssp EEEEEEEECSSSSSEECCGG-GEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCS
T ss_pred EEEEEEcccCCCCCCceEEE-EecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccC
Confidence 2488899 766543211 1000 01111111 4678898875543 22 22 46666766655 5667777
Q ss_pred ccceEEEEEcCCCCEEEEeeCC-----CcEEEeCCC
Q 013274 396 YEYVNCCCFSSQDQELYTGGND-----RQILVWCPS 426 (446)
Q Consensus 396 ~~~v~~~~fSpd~~~lvtgs~D-----~~v~vW~~~ 426 (446)
...+..+.++ |++.|+..+.+ +.+++|.++
T Consensus 356 ~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 356 KWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp SSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred ceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 7778888888 88887766554 889999765
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.76 E-value=4.9e-16 Score=148.78 Aligned_cols=247 Identities=9% Similarity=0.059 Sum_probs=160.1
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECC-CCeeeEEEec--CCceEEeeeccCCCCce--EEEEee------------
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTN-CTRVVMNFKM--PGKVYRTAMSPLAASHM--LIAAGT------------ 167 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~~--~lasgs------------ 167 (446)
.+..+.++| ++++|++++.+ +|.+|++. +++....... .+....+++++ +.. +++++.
T Consensus 41 ~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~sp---dg~~l~~~~~~~~~~~~~~~~~~ 115 (365)
T 1jof_A 41 PISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIGGHPRANDADT---NTRAIFLLAAKQPPYAVYANPFY 115 (365)
T ss_dssp CCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECCSSGGGGCTTS---CCEEEEEEECSSTTCCEEEEEES
T ss_pred CCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEEeeEeecCCCCccEEECC---CCCEEEEEEecCCcceeccceee
Confidence 344566766 78889999988 99999997 7766543332 23233344554 333 344543
Q ss_pred -CCCcEEEEeCC-CCceeeeee----CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc-CCceeEEeecccccccCCC
Q 013274 168 -EDVQVRLCDIA-SGAISQTLS----GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR-RAGCFRVLDQSQSQLGRRP 240 (446)
Q Consensus 168 -~d~~v~vwd~~-~~~~~~~l~----~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~-~~~~~~~~~~~~~~~~~~~ 240 (446)
.++.+.+|+++ +++....+. .+...+.+++|+|++++++++...++.|++||+. +++... +.
T Consensus 116 ~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~-~~---------- 184 (365)
T 1jof_A 116 KFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVEL-VG---------- 184 (365)
T ss_dssp SSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEE-EE----------
T ss_pred cCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEE-ee----------
Confidence 68899999997 466544443 2556789999999998755444457899999986 443210 00
Q ss_pred cccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC
Q 013274 241 PLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED 320 (446)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d 320 (446)
.. ....|...+..++|+||
T Consensus 185 ------------------------------------------~~-------------------~~~~~g~~p~~~~~spd 203 (365)
T 1jof_A 185 ------------------------------------------SV-------------------DAPDPGDHPRWVAMHPT 203 (365)
T ss_dssp ------------------------------------------EE-------------------ECSSTTCCEEEEEECTT
T ss_pred ------------------------------------------eE-------------------ecCCCCCCCCEeEECCC
Confidence 00 00011234788999999
Q ss_pred CCEEEEeec-CCcEEEEecC--cCceee--eeeeEEEee--c-C-------CCeEEE-EcCCCcEEEEeC--CC-----c
Q 013274 321 GMYLLSAGS-DSRIRLWDVE--SGRNTL--VNFETVRLQ--T-S-------KPIQLA-TTQDPAVVFVPC--MT-----A 377 (446)
Q Consensus 321 g~~l~sgs~-D~~i~lWd~~--~~~~~~--~~~~~~~~~--~-~-------~~~~~~-~~~~~~~~~~~~--~~-----~ 377 (446)
|++|++++. +++|.+|++. +++... ..+..+... . . .+..++ ++|++..++++. .+ .
T Consensus 204 g~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~ 283 (365)
T 1jof_A 204 GNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGY 283 (365)
T ss_dssp SSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCE
T ss_pred CCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCe
Confidence 998877664 7899999875 343211 111111000 0 1 245678 999998877653 23 7
Q ss_pred eEEEEee-cCceEE---EecccccceEEEEEcC---CCCEEEEeeCC-CcEEEeCCCCC
Q 013274 378 VKAFDIW-SGKTCL---TFRGHYEYVNCCCFSS---QDQELYTGGND-RQILVWCPSRH 428 (446)
Q Consensus 378 ~~~~d~~-~~~~~~---~l~gH~~~v~~~~fSp---d~~~lvtgs~D-~~v~vW~~~~~ 428 (446)
+.+|++. +++... ....+...+..++||| ||++|++++.+ ++|+||+.+..
T Consensus 284 i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 284 IAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 9999996 566543 2444666678899999 89999988765 89999988655
No 160
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.75 E-value=2.5e-15 Score=142.51 Aligned_cols=261 Identities=13% Similarity=0.170 Sum_probs=162.7
Q ss_pred CCccceeEEEeecCCCCEEEEeeC--CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGAS--DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~--Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
.+......|+|+| ++++++++.. ++.|.+||+.++... .+. ....|...+..+.++| ++++
T Consensus 37 ~~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~~----------~~~-----~~~~~~~~p~~~a~sp-dg~~ 99 (347)
T 3hfq_A 37 AATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTAH----------KLN-----TVVAPGTPPAYVAVDE-ARQL 99 (347)
T ss_dssp EECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEEE----------EEE-----EEEEESCCCSEEEEET-TTTE
T ss_pred eccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcEE----------Eee-----eeecCCCCCEEEEECC-CCCE
Confidence 4556778899997 5664444432 689999999654310 000 0112444566777776 7888
Q ss_pred EEEEe-CCCeEEEEECC-CCe--eeEEEecCC----------ceEEeeeccCCCCceEEEEeeCCCcEEEEeCC-CCcee
Q 013274 119 FVTGS-YDHYVKVWDTN-CTR--VVMNFKMPG----------KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA-SGAIS 183 (446)
Q Consensus 119 l~s~s-~D~~i~iWd~~-~~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~-~~~~~ 183 (446)
|++++ .+++|++|++. ++. .+..+...+ .+..++++++.. ++++...++.|++||++ ++...
T Consensus 100 l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~---l~v~~~~~~~v~~~~~~~~g~~~ 176 (347)
T 3hfq_A 100 VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR---LAVIDLGSDKVYVYNVSDAGQLS 176 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC---EEEEETTTTEEEEEEECTTSCEE
T ss_pred EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCc---EEEEeCCCCEEEEEEECCCCcEE
Confidence 88777 78999999995 332 333333221 356678887542 77777788899999998 55432
Q ss_pred --eeeeCC-CCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCC-ceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 184 --QTLSGH-RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA-GCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 184 --~~l~~h-~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
..+..+ ......++|+|+++++++++..++.|++|++... +.+........
T Consensus 177 ~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~------------------------- 231 (347)
T 3hfq_A 177 EQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKT------------------------- 231 (347)
T ss_dssp EEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEES-------------------------
T ss_pred EeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeee-------------------------
Confidence 222322 3367889999999977777788999999998741 11111000000
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCcEEEEec
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRIRLWDV 338 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i~lWd~ 338 (446)
.+. .......+..++|+|||++| +++..+++|.+|++
T Consensus 232 -----------------------------------~~~-------~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~ 269 (347)
T 3hfq_A 232 -----------------------------------IPA-------DYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAV 269 (347)
T ss_dssp -----------------------------------SCT-------TCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEE
T ss_pred -----------------------------------cCC-------CCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEE
Confidence 000 00001247889999999977 66677999999999
Q ss_pred CcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC--CceEEEEee--cCceE
Q 013274 339 ESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM--TAVKAFDIW--SGKTC 389 (446)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~--~~~~~ 389 (446)
.... ....+.........+..++++|++..++++.. ..+.+|++. ++++.
T Consensus 270 ~~~g-~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 270 TADG-HLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp CGGG-CEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred CCCC-cEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 7421 11112222222334677899999987777643 578999663 45543
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=1.3e-16 Score=166.67 Aligned_cols=290 Identities=9% Similarity=0.063 Sum_probs=175.8
Q ss_pred eEeCCCcc---ceeEEEeecCCCCEEEEeeC---------CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccc
Q 013274 37 EIVSPHKG---SINSLQVDLTEERYLLSGAS---------DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKY 104 (446)
Q Consensus 37 ~~~~~H~~---~v~~l~~s~~~~~~l~s~s~---------Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~ 104 (446)
.++.+|.. .|.+++||| +|++|++++. |++|++||+++++.... .. ...
T Consensus 50 ~~~~~~~~~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~-------~~-----------l~~ 110 (719)
T 1z68_A 50 TILSNRTMKSVNASNYGLSP-DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRG-------NE-----------LPR 110 (719)
T ss_dssp EEECHHHHHTTTCSEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCS-------SC-----------CCS
T ss_pred EEEccccccccceeeEEECC-CCCeEEEEecCceeEEeecceEEEEEECCCCccccc-------ee-----------cCc
Confidence 34445544 499999997 6888998877 79999999987643100 00 012
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCc---e-----------------EEeeeccCCCCceEEE
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK---V-----------------YRTAMSPLAASHMLIA 164 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~~la 164 (446)
.+..+.|+| |++.||.++ |++|++||+.+++... +...+. + ..++++|++ ..|+
T Consensus 111 ~~~~~~~SP-DG~~la~~~-~~~i~~~~~~~g~~~~-l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG---~~la 184 (719)
T 1z68_A 111 PIQYLCWSP-VGSKLAYVY-QNNIYLKQRPGDPPFQ-ITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG---KFLA 184 (719)
T ss_dssp SBCCEEECS-STTCEEEEE-TTEEEEESSTTSCCEE-CCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS---SEEE
T ss_pred ccccceECC-CCCEEEEEE-CCeEEEEeCCCCCcEE-EecCCCcCCeEcccccceeeeecccCcccEEECCCC---CEEE
Confidence 355677887 888998886 7899999998877543 221111 1 256777754 4677
Q ss_pred EeeCCC----------------------------------cEEEEeCCCCcee--------eeeeCCCCCeEEEEEecCC
Q 013274 165 AGTEDV----------------------------------QVRLCDIASGAIS--------QTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 165 sgs~d~----------------------------------~v~vwd~~~~~~~--------~~l~~h~~~v~sv~~s~~~ 202 (446)
+++.|. .|++||+++++.. ..+.+|...+.+++|+|++
T Consensus 185 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~ 264 (719)
T 1z68_A 185 YAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE 264 (719)
T ss_dssp EEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS
T ss_pred EEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC
Confidence 766442 7889999988643 2345788899999999996
Q ss_pred CeEEEEeeCC----CcEEEEE----ccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 203 EWILVTGGCD----GAIRFWD----IRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 203 ~~~l~S~s~D----g~I~iWd----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
+ ++++.... ..|.+|| +.++.+...+.
T Consensus 265 ~-~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~-------------------------------------------- 299 (719)
T 1z68_A 265 R-VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQE-------------------------------------------- 299 (719)
T ss_dssp E-EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGE--------------------------------------------
T ss_pred e-EEEEEeccccCeEEEEEEcccCCCCCCceEEEEe--------------------------------------------
Confidence 5 55554322 2477888 54432210000
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeE-----EEEEccCCCEEE--EeecCC--cEEEEecCcCceee
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVT-----GLKVTEDGMYLL--SAGSDS--RIRLWDVESGRNTL 345 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~-----~l~fs~dg~~l~--sgs~D~--~i~lWd~~~~~~~~ 345 (446)
....+|.+.+. .+.|+|||+.|+ +...++ .|.+||+.+++...
T Consensus 300 ----------------------------~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~~~ 351 (719)
T 1z68_A 300 ----------------------------HIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENAIQ 351 (719)
T ss_dssp ----------------------------EEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTCEE
T ss_pred ----------------------------cccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCceEe
Confidence 00001222222 567999998554 444555 46666776654211
Q ss_pred eeeeEEEeecCCCeEEEEcCCCcEEEEeCC-----CceEEEEeec--Cc-eEEEec----ccccceEEEEEcCCCCEEE-
Q 013274 346 VNFETVRLQTSKPIQLATTQDPAVVFVPCM-----TAVKAFDIWS--GK-TCLTFR----GHYEYVNCCCFSSQDQELY- 412 (446)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~d~~~--~~-~~~~l~----gH~~~v~~~~fSpd~~~lv- 412 (446)
+. ........+.+.++..+++.+.. ...++|.+.. +. ....+. +|...+..+.||||+++|+
T Consensus 352 --lt---~~~~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~ 426 (719)
T 1z68_A 352 --IT---SGKWEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYAL 426 (719)
T ss_dssp --CS---CSSSCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEE
T ss_pred --cc---cCceEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEE
Confidence 11 01111122333434445555544 4578888764 32 123333 4777889999999998877
Q ss_pred EeeCC--CcEEEeCCCCCC
Q 013274 413 TGGND--RQILVWCPSRHI 429 (446)
Q Consensus 413 tgs~D--~~v~vW~~~~~~ 429 (446)
+++.+ ..+.+|++.++.
T Consensus 427 ~~s~~~~p~~~l~d~~~g~ 445 (719)
T 1z68_A 427 VCYGPGIPISTLHDGRTDQ 445 (719)
T ss_dssp EECCBSSCEEEEECSSSCC
T ss_pred EcCCCCCCeEEEEECCCCC
Confidence 45554 468889886554
No 162
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.71 E-value=5e-14 Score=129.74 Aligned_cols=251 Identities=8% Similarity=0.145 Sum_probs=165.9
Q ss_pred CCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
.+|.....+|++++ +++++++.+.++.|.+||.+.... . . ........+|...+..+++.+.++.++
T Consensus 26 ~g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~~-~----------~-~~~~~~~~~~~~~p~~i~~~~~~g~l~ 92 (286)
T 1q7f_A 26 EGQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRFK-F----------Q-FGECGKRDSQLLYPNRVAVVRNSGDII 92 (286)
T ss_dssp TTCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCEE-E----------E-ECCBSSSTTCBSSEEEEEEETTTTEEE
T ss_pred CCccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcEE-E----------E-ecccCCCcccccCceEEEEEcCCCeEE
Confidence 35667889999986 578888888999999999762210 0 0 000011124555677777755566666
Q ss_pred EEEeC-CCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee--CCCCCeE
Q 013274 120 VTGSY-DHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS--GHRDGIM 194 (446)
Q Consensus 120 ~s~s~-D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~--~h~~~v~ 194 (446)
++... ++.|++|| .+++.+..+... .....+++.+. ..++++...++.|++||.+ ++....+. ++...+.
T Consensus 93 v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~ 167 (286)
T 1q7f_A 93 VTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNK---GRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPN 167 (286)
T ss_dssp EEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEE
T ss_pred EEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCC---CCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcE
Confidence 66543 89999999 556666655432 24566777663 3467777778899999964 55555553 4556789
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
.++++|+++ ++++.+.++.|++||... ..+..+.
T Consensus 168 ~i~~~~~g~-l~v~~~~~~~i~~~~~~g-~~~~~~~-------------------------------------------- 201 (286)
T 1q7f_A 168 GVVVNDKQE-IFISDNRAHCVKVFNYEG-QYLRQIG-------------------------------------------- 201 (286)
T ss_dssp EEEECSSSE-EEEEEGGGTEEEEEETTC-CEEEEES--------------------------------------------
T ss_pred EEEECCCCC-EEEEECCCCEEEEEcCCC-CEEEEEc--------------------------------------------
Confidence 999999876 677878889999999743 2211110
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC-cEEEEecCcCceeeeeeeEEEe
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS-RIRLWDVESGRNTLVNFETVRL 353 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~-~i~lWd~~~~~~~~~~~~~~~~ 353 (446)
..++...+..|+++++|.++++...++ .|++||... +. +. ....
T Consensus 202 ------------------------------~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~g-~~-~~---~~~~ 246 (286)
T 1q7f_A 202 ------------------------------GEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQDG-QL-IS---ALES 246 (286)
T ss_dssp ------------------------------CTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTTS-CE-EE---EEEE
T ss_pred ------------------------------cCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCCC-CE-EE---EEcc
Confidence 001123467899999999999888786 999998542 21 00 0000
Q ss_pred ecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 354 QTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+...+.+++|+|||+++++ +.|++|++|+.....
T Consensus 247 ---------------------------------------~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 247 ---------------------------------------KVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp ---------------------------------------SSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCCC
T ss_pred ---------------------------------------cCCCCcceeEEECCCCcEEEE-CCCCeEEEEEccccc
Confidence 011234678999999998888 579999999876543
No 163
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=3.1e-14 Score=134.17 Aligned_cols=246 Identities=12% Similarity=0.122 Sum_probs=165.1
Q ss_pred ccceeEEEeecCCCCEEEEeeCC------------------------CcEEEEEcccCcCCCCCCccccccceEEecccc
Q 013274 43 KGSINSLQVDLTEERYLLSGASD------------------------SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQH 98 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~D------------------------g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (446)
.+.+.+|++++ +++++++.+.+ ++|.+||.+++.... ..
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~------------~~---- 85 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ------------SS---- 85 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE------------EE----
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe------------cc----
Confidence 47799999997 57888888888 478889876554210 00
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe-eeEEEec----------CCceEEeeeccCCCCceEEEEee
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-VVMNFKM----------PGKVYRTAMSPLAASHMLIAAGT 167 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~~~lasgs 167 (446)
..++-..+..+++.+ ++.++++...++.|++||.+... .+..+.. ......+++.+. +..++++.+
T Consensus 86 ~~~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~--~g~lyv~d~ 162 (329)
T 3fvz_A 86 GKNLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPS--TGAVFVSDG 162 (329)
T ss_dssp CTTTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTT--TCCEEEEEC
T ss_pred CCCccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCC--CCeEEEEeC
Confidence 013334566667765 77788888889999999986542 4444421 113566777662 234667765
Q ss_pred -CCCcEEEEeCCCCceeeeeeC----------CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccc
Q 013274 168 -EDVQVRLCDIASGAISQTLSG----------HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQL 236 (446)
Q Consensus 168 -~d~~v~vwd~~~~~~~~~l~~----------h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~ 236 (446)
.++.|++|| .++..+..+.. +-.....|+++|++..++++...++.|++||..+++.+..+..
T Consensus 163 ~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~----- 236 (329)
T 3fvz_A 163 YCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKH----- 236 (329)
T ss_dssp SSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECC-----
T ss_pred CCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEec-----
Confidence 689999999 56666666642 2234789999998556788888899999999876655443310
Q ss_pred cCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEE
Q 013274 237 GRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLK 316 (446)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 316 (446)
..+...+.+++
T Consensus 237 ---------------------------------------------------------------------~~~~~~~~~~~ 247 (329)
T 3fvz_A 237 ---------------------------------------------------------------------ASFGRNVFAIS 247 (329)
T ss_dssp ---------------------------------------------------------------------TTTTTCEEEEE
T ss_pred ---------------------------------------------------------------------cccCCCcceee
Confidence 01122355677
Q ss_pred Ecc------CCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEE
Q 013274 317 VTE------DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCL 390 (446)
Q Consensus 317 fs~------dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 390 (446)
|+| +|..+++...+.+|++||+.+++ .+.
T Consensus 248 ~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~---------------------------------------------~~~ 282 (329)
T 3fvz_A 248 YIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGE---------------------------------------------IID 282 (329)
T ss_dssp EETTEEEEEECCCCTTCSCCCCEEEEETTTCC---------------------------------------------EEE
T ss_pred ecCCEEEEeCCCEEeccCCCcEEEEEEcCCCe---------------------------------------------EEE
Confidence 777 33333334444567777765543 222
Q ss_pred Ee---cccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 391 TF---RGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 391 ~l---~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
.+ .+|...+..|+|+|||.++++...++.|++|+++..
T Consensus 283 ~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 283 VFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp EECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred EEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 22 356678899999999999999999999999998754
No 164
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.67 E-value=1.4e-14 Score=136.86 Aligned_cols=299 Identities=12% Similarity=0.103 Sum_probs=167.7
Q ss_pred EEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE-EEEEeCCCe
Q 013274 49 LQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL-FVTGSYDHY 127 (446)
Q Consensus 49 l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~-l~s~s~D~~ 127 (446)
+++++ ++.++++++.|++|++||+.+++... ... .+....+..+.++| ++++ +++++.++.
T Consensus 5 ~~~~~-~~~~~v~~~~~~~v~~~d~~~~~~~~------------~~~----~~~~~~~~~~~~s~-dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 5 PALKA-GHEYMIVTNYPNNLHVVDVASDTVYK------------SCV----MPDKFGPGTAMMAP-DNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCCT-TCEEEEEEETTTEEEEEETTTTEEEE------------EEE----CSSCCSSCEEEECT-TSSEEEEEETTTTE
T ss_pred ccccC-CCEEEEEeCCCCeEEEEECCCCcEEE------------EEe----cCCCCCCceeEECC-CCCEEEEEeCCCCc
Confidence 34553 67899999999999999997654210 000 01111344667776 6664 556678899
Q ss_pred EEEEECCCCeeeEEEecCCc-------eEEeeeccCCCCceEEEEeeCC------------CcEEEEeCCCCcee---ee
Q 013274 128 VKVWDTNCTRVVMNFKMPGK-------VYRTAMSPLAASHMLIAAGTED------------VQVRLCDIASGAIS---QT 185 (446)
Q Consensus 128 i~iWd~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~lasgs~d------------~~v~vwd~~~~~~~---~~ 185 (446)
|.+||+.+++.+..+..... +..++++++ ..++++++.+ +.|.+||+++++.. ..
T Consensus 67 i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spd---g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~ 143 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPD---GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT 143 (349)
T ss_dssp EEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTT---SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE
T ss_pred EEEEeCCCCcEEEEEEcccccccccccccceEECCC---CCEEEEEcccccccccccccCCCeEEEEECCCccccceeee
Confidence 99999999988877765331 445667764 3356666544 89999999986433 33
Q ss_pred eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC-
Q 013274 186 LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR- 264 (446)
Q Consensus 186 l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 264 (446)
+. +...+.+++|+|+++ +++ ++ +.|.+||+.+++....+......... .. . . ........
T Consensus 144 ~~-~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~---~~------~--~---~~~~~~~~~ 204 (349)
T 1jmx_B 144 FP-MPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKG---YS------A--P---DVLYFWPHQ 204 (349)
T ss_dssp EE-CCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTT---BC------C--C---BCCCCCCCC
T ss_pred cc-CCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCcc---cc------C--c---cceeeecCC
Confidence 43 334688999999998 555 33 34999999888766554321100000 00 0 0 00000000
Q ss_pred CccccccCCCceeecccceee-cC-----CccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecCCcEEEEe
Q 013274 265 APQKRSANGNGVRQSSVGRIP-AK-----GSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSDSRIRLWD 337 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D~~i~lWd 337 (446)
...........+...+.+... .. ..+......+.+... ....+...+..++|+| ||++|+++ ++.|.+||
T Consensus 205 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d 281 (349)
T 1jmx_B 205 SPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQ-EFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYD 281 (349)
T ss_dssp CTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEE-EEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEE
T ss_pred CcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEec-ccccCCCcceeeEecCCCCCEEEEE--cCeEEEEE
Confidence 000000000000000000000 00 000000000000000 0112334578899999 99999887 88999999
Q ss_pred cCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEeccc
Q 013274 338 VESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGH 395 (446)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH 395 (446)
+.+++... ... ....+..+++++++..+++.. ...+.+||+.+++.+..+..+
T Consensus 282 ~~~~~~~~----~~~-~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 282 LKQRKLIK----AAN-LDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp TTTTEEEE----EEE-CSSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CccCeEEE----EEc-CCCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 98865311 111 123456788999987776654 367999999998887777654
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=4.5e-15 Score=155.51 Aligned_cols=290 Identities=12% Similarity=0.143 Sum_probs=179.5
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
....+++|+| ++.+|+++ |++|++||++++... .++.......+........++| |+++|+.++
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~ 80 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGNSS------------VFLENSTFDEFGHSINDYSISP-DGQFILLEY 80 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCCEE------------EEECTTTTTTCCSCCCEEEECT-TSSEEEEEE
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCceE------------EEEechhhhhhcccccceEECC-CCCEEEEEE
Confidence 3467899986 57888886 999999999876521 1111111112222233355666 899999988
Q ss_pred CC---------CeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee-eeeCCCCCe
Q 013274 124 YD---------HYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ-TLSGHRDGI 193 (446)
Q Consensus 124 ~D---------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~-~l~~h~~~v 193 (446)
.| +.+.+||+.+++........+.+...+++|++. .||.++ |+.|++||+.++...+ +..++...+
T Consensus 81 ~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~---~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 81 NYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGH---KLAYVW-NNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp EEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTT---CEEEEE-TTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred CCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCC---EEEEEE-CCeEEEEECCCCceEEEcCCCCccce
Confidence 87 455699999988654333456678888998653 566664 7899999999886543 223333322
Q ss_pred -----------------EEEEEecCCCeEEEEeeCC-CcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 194 -----------------MTVEWSTSSEWILVTGGCD-GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 194 -----------------~sv~~s~~~~~~l~S~s~D-g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
.++.||||++. |+.++.| +.+++|++..... .
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~-------~---------------------- 206 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSD-------E---------------------- 206 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCS-------T----------------------
T ss_pred ecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecC-------C----------------------
Confidence 35899999997 4565544 4488887642100 0
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEE
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRL 335 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~l 335 (446)
..+...+..+.|.+.|.. ....+|++
T Consensus 207 --------------------------------------------------~~~~~~~~~~~yp~~G~~----~~~~~l~v 232 (740)
T 4a5s_A 207 --------------------------------------------------SLQYPKTVRVPYPKAGAV----NPTVKFFV 232 (740)
T ss_dssp --------------------------------------------------TCSSCEEEEEECCBTTSC----CCEEEEEE
T ss_pred --------------------------------------------------CCCCCcceeecCCCCcCc----CCeeEEEE
Confidence 011223455666666643 12236899
Q ss_pred EecCc---Cce-eeeeeeEE-E--eecCCCeEEEEcCCCcEEEEeC--C---CceEEEEeecCc----e--EEEe--ccc
Q 013274 336 WDVES---GRN-TLVNFETV-R--LQTSKPIQLATTQDPAVVFVPC--M---TAVKAFDIWSGK----T--CLTF--RGH 395 (446)
Q Consensus 336 Wd~~~---~~~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~d~~~~~----~--~~~l--~gH 395 (446)
||+.+ +.. ....+... . ........++++||+..++... . ..+.+||+.+++ + ...+ .+|
T Consensus 233 ~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~ 312 (740)
T 4a5s_A 233 VNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMST 312 (740)
T ss_dssp EETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECS
T ss_pred EECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccC
Confidence 99998 621 01111000 0 0112234577889987554431 1 258899999887 2 2223 567
Q ss_pred ccceE-----EEEEcCCCCEEE-EeeCC---CcEEEeCCCCCCCCCcCCCc
Q 013274 396 YEYVN-----CCCFSSQDQELY-TGGND---RQILVWCPSRHISDGVDAGP 437 (446)
Q Consensus 396 ~~~v~-----~~~fSpd~~~lv-tgs~D---~~v~vW~~~~~~~~~~~~~~ 437 (446)
...|. ..+|||||+.|+ ..|.+ ..|.+|++++.....+-.|.
T Consensus 313 ~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~lT~g~ 363 (740)
T 4a5s_A 313 TGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFITKGT 363 (740)
T ss_dssp SSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEESCCSS
T ss_pred CceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEecccCC
Confidence 77766 789999999887 66643 45888888877666565554
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.66 E-value=2.9e-14 Score=136.17 Aligned_cols=266 Identities=12% Similarity=0.057 Sum_probs=172.3
Q ss_pred CCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe----------CCCeEEEEEC
Q 013274 64 SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS----------YDHYVKVWDT 133 (446)
Q Consensus 64 ~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s----------~D~~i~iWd~ 133 (446)
.|++|.+||..+++... . ...+... .+.++| ++++++++. .|++|.+||+
T Consensus 29 ~d~~v~v~D~~t~~~~~------------~-----i~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~ 88 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLG------------M-----VPTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDA 88 (361)
T ss_dssp GGCEEEEEETTTCCEEE------------E-----EECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEET
T ss_pred ccCeEEEEECCCCeEEE------------E-----ecCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEEC
Confidence 57899999987654210 0 0112222 456665 888888776 3678999999
Q ss_pred CCCeeeEEEecC-------CceEEeeeccCCCCceEEEEee-C-CCcEEEEeCCCCceeee-eeCCCCCeEEEEEecCCC
Q 013274 134 NCTRVVMNFKMP-------GKVYRTAMSPLAASHMLIAAGT-E-DVQVRLCDIASGAISQT-LSGHRDGIMTVEWSTSSE 203 (446)
Q Consensus 134 ~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~lasgs-~-d~~v~vwd~~~~~~~~~-l~~h~~~v~sv~~s~~~~ 203 (446)
.+.+.+..+... .....++++++. .+|+++. . ++.|.+||+++++.+.. +.. .....+.+.|+++
T Consensus 89 ~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg---~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~--~~~~~v~~~p~~~ 163 (361)
T 2oiz_A 89 DKLTFEKEISLPPKRVQGLNYDGLFRQTTDG---KFIVLQNASPATSIGIVDVAKGDYVEDVTAA--AGCWSVIPQPNRP 163 (361)
T ss_dssp TTCCEEEEEEECTTBCCBCCCGGGEEECTTS---SEEEEEEESSSEEEEEEETTTTEEEEEEGGG--TTEEEEEECTTSS
T ss_pred cCCcEEEEEEcCccccccCCCcceEEECCCC---CEEEEECCCCCCeEEEEECCCCcEEEEEecC--CCcceeEEcCCCC
Confidence 998888777643 123345666653 3455544 3 68999999999988777 542 2224466778775
Q ss_pred eEEEEeeCCCcEEEEEccC-CceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccc
Q 013274 204 WILVTGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVG 282 (446)
Q Consensus 204 ~~l~S~s~Dg~I~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (446)
..+++.+.||.+.+|++.. ++....... ..
T Consensus 164 ~~~~~~~~dg~~~~v~~~~~g~~~~~~~~--~~----------------------------------------------- 194 (361)
T 2oiz_A 164 RSFMTICGDGGLLTINLGEDGKVASQSRS--KQ----------------------------------------------- 194 (361)
T ss_dssp SEEEEEETTSSEEEEEECTTSSEEEEEEC--CC-----------------------------------------------
T ss_pred eeEEEECCCCcEEEEEECCCCcEeeeccc--cc-----------------------------------------------
Confidence 5678999999999999864 222111000 00
Q ss_pred eeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee-eeEEE-------ee
Q 013274 283 RIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN-FETVR-------LQ 354 (446)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~-~~~~~-------~~ 354 (446)
.+. .+..++ .+.+++++..++..+.+++|.++|+......... +.... ..
T Consensus 195 ----------~~~-----------~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (361)
T 2oiz_A 195 ----------MFS-----------VKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWV 252 (361)
T ss_dssp ----------CSC-----------TTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCE
T ss_pred ----------eEc-----------CCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccc
Confidence 000 000011 1223567766666778889999998765422211 00000 01
Q ss_pred cCCCeEEEEcCCCcEEEEeC------------CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEE
Q 013274 355 TSKPIQLATTQDPAVVFVPC------------MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILV 422 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~------------~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~v 422 (446)
......+++++++..+++.. ...+.+||+.+++.+.++..|. +.+++|||||++|++++. ++|.|
T Consensus 253 p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v 329 (361)
T 2oiz_A 253 PGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNV 329 (361)
T ss_dssp ECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEE
T ss_pred cCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEE
Confidence 12222367888887777653 2368899999999999999888 999999999999998887 99999
Q ss_pred eCCCCC
Q 013274 423 WCPSRH 428 (446)
Q Consensus 423 W~~~~~ 428 (446)
||+.+.
T Consensus 330 ~D~~t~ 335 (361)
T 2oiz_A 330 YDISQP 335 (361)
T ss_dssp EECSSS
T ss_pred EECCCC
Confidence 999877
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.64 E-value=1.5e-13 Score=131.48 Aligned_cols=257 Identities=11% Similarity=0.081 Sum_probs=154.3
Q ss_pred CccceeEEEeecCCCCEEEEeeCCCcEEEEEcc-cCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE--
Q 013274 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQ-RATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL-- 118 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~-- 118 (446)
+...+..++|+| ++++|++++.+ +|.+||+. ++... .... ....++ +..+.++| ++++
T Consensus 38 ~~~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~------------~~~~-~~~~g~---~~~~~~sp-dg~~l~ 98 (365)
T 1jof_A 38 QDEPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIV------------HEAS-HPIGGH---PRANDADT-NTRAIF 98 (365)
T ss_dssp TTCCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEE------------EEEE-EECCSS---GGGGCTTS-CCEEEE
T ss_pred CCCCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEE------------EeeE-eecCCC---CccEEECC-CCCEEE
Confidence 445678999997 67888888888 99999986 43210 0000 000111 22234454 7773
Q ss_pred EEEEe-------------CCCeEEEEECC-CCeeeEEEe-----cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC-
Q 013274 119 FVTGS-------------YDHYVKVWDTN-CTRVVMNFK-----MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA- 178 (446)
Q Consensus 119 l~s~s-------------~D~~i~iWd~~-~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~- 178 (446)
+++++ .++++.+|+++ .++....+. ....+..++++|+.. .++++...++.|++||++
T Consensus 99 ~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~--~l~~~~~~~~~v~~~~~~~ 176 (365)
T 1jof_A 99 LLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTET--YLYSADLTANKLWTHRKLA 176 (365)
T ss_dssp EEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSS--EEEEEETTTTEEEEEEECT
T ss_pred EEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCC--EEEEEcCCCCEEEEEEECC
Confidence 55653 68999999997 465543333 234577888888642 233333446799999998
Q ss_pred CCcee--eeee--CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC--CceeEEeecccccccCCCcccccceeeccc
Q 013274 179 SGAIS--QTLS--GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR--AGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 179 ~~~~~--~~l~--~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
+++.. ..+. .|...+..++|+|++++++++...+++|.+|++.. +.....+.. +..
T Consensus 177 ~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~----~~~-------------- 238 (365)
T 1jof_A 177 SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHS----FPL-------------- 238 (365)
T ss_dssp TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE----EES--------------
T ss_pred CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccce----EEc--------------
Confidence 77643 3343 34667899999999987554444578999998752 221100000 000
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccccccccc------CeEEEE-EccCCCEEE
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYG------AVTGLK-VTEDGMYLL 325 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~------~v~~l~-fs~dg~~l~ 325 (446)
+.. ...+|.. .+..++ |+|||++|+
T Consensus 239 -----------------------------------------~~~-------~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 239 -----------------------------------------IPP-------GIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp -----------------------------------------SCT-------TCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred -----------------------------------------CCC-------CcCCcccccccccccccEEEECCCCCEEE
Confidence 000 0001111 378899 999999887
Q ss_pred EeecCC------cEEEEecC-cCceeeeeeeEEEeecCCCeEEEEcC---CCcEEEEeCC--CceEEEEeecC
Q 013274 326 SAGSDS------RIRLWDVE-SGRNTLVNFETVRLQTSKPIQLATTQ---DPAVVFVPCM--TAVKAFDIWSG 386 (446)
Q Consensus 326 sgs~D~------~i~lWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~--~~~~~~d~~~~ 386 (446)
++..+. +|++|++. +++.... ..........+..++++| ++..++++.. +.+.+|++...
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~g~~~~~-~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDCGSIEKQ-LFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTTSCEEEE-EEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EECCCCCCCCCCeEEEEEECCCCCEEEe-eeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 665432 89999996 4432111 001111122345567888 7888888754 57899998765
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.62 E-value=1.4e-13 Score=142.13 Aligned_cols=290 Identities=10% Similarity=-0.002 Sum_probs=176.3
Q ss_pred eCCCccceeEEEeecCCCCEEEEe--eCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEe---------
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSG--ASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAIS--------- 107 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~--s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~--------- 107 (446)
+.+|...|..++|++ +.-++++. +.|+...||....+... .. ..+|...+.
T Consensus 19 ~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~--------------l~~~~~~~~~~~~~~~~~ 80 (662)
T 3azo_A 19 VASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADGAE---ES--------------ALPAPWNVRNRVFEYSGF 80 (662)
T ss_dssp HHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTSCE---EE--------------SSCTTCCBCCCGGGTCCC
T ss_pred HhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCCCc---ce--------------eCCCCccccccccccCCc
Confidence 457889999999985 45566666 66889999986322110 00 112222222
Q ss_pred EEEEe-ecCCcE-EEEEeC-CCeEEEEECC--C-CeeeEEEec------CCceEEeeeccCCCCceEEEEeeCC------
Q 013274 108 SAIWY-PVDTGL-FVTGSY-DHYVKVWDTN--C-TRVVMNFKM------PGKVYRTAMSPLAASHMLIAAGTED------ 169 (446)
Q Consensus 108 ~~~~~-~~~~~~-l~s~s~-D~~i~iWd~~--~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~lasgs~d------ 169 (446)
...++ ++|+++ |+.++. +..|.+|++. . +.. ..+.. ......++++|++ ..|++++.+
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~-~~l~~~~~~~~~~~~~~~~~spDg---~~l~~~~~~~~~~~~ 156 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVP-RPLTPVSAVGGGLRWADPVLLPER---GEVWCMAEEFTGEGP 156 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCC-EECSCCCCSTTCEEEEEEEEETTT---TEEEEEEEEECSSST
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCC-EeccCCccCCCCccccCcEECCCC---CEEEEEEecccCCCC
Confidence 34455 247777 665544 5667777765 2 432 22322 2345667788754 356666655
Q ss_pred ----CcEEEEeCCC------Cceeeeee-CCCCCeEEEEEecCCCeEEEEeeCC--------CcEEEEEcc-CCc--eeE
Q 013274 170 ----VQVRLCDIAS------GAISQTLS-GHRDGIMTVEWSTSSEWILVTGGCD--------GAIRFWDIR-RAG--CFR 227 (446)
Q Consensus 170 ----~~v~vwd~~~------~~~~~~l~-~h~~~v~sv~~s~~~~~~l~S~s~D--------g~I~iWd~~-~~~--~~~ 227 (446)
..|++||+++ +. ...+. .+...+.+++|+|+++++ +.++.+ ..|++||+. ++. ...
T Consensus 157 ~~~~~~i~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~SpDG~~l-a~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~ 234 (662)
T 3azo_A 157 SDVRRFLAAVPLDGSAAADRSA-VRELSDDAHRFVTGPRLSPDGRQA-VWLAWDHPRMPWEGTELKTARVTEDGRFADTR 234 (662)
T ss_dssp TCEEEEEEEEETTSTTTTCGGG-SEESSCSCSSEECCCEECTTSSEE-EEEEECTTCCTTTCEEEEEEEECTTSCEEEEE
T ss_pred CCceeEEEEEECCCCccccCCc-eeEEEecCCCcccCceECCCCCEE-EEEECCCCCCCCCCcEEEEEEECCCCcccccE
Confidence 5899999988 54 34555 666788899999999974 555544 379999987 331 110
Q ss_pred EeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccc
Q 013274 228 VLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATA 307 (446)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (446)
.+ ..+
T Consensus 235 ~l---------------------------------------------------------------------------~~~ 239 (662)
T 3azo_A 235 TL---------------------------------------------------------------------------LGG 239 (662)
T ss_dssp EE---------------------------------------------------------------------------EEE
T ss_pred Ee---------------------------------------------------------------------------CCC
Confidence 00 012
Q ss_pred cccCeEEEEEccCCCEEEEeecCC--cEEEEecCcCceeeeeeeEEEeecC------CCeEEEEcCCCcEEEEeCCCceE
Q 013274 308 HYGAVTGLKVTEDGMYLLSAGSDS--RIRLWDVESGRNTLVNFETVRLQTS------KPIQLATTQDPAVVFVPCMTAVK 379 (446)
Q Consensus 308 h~~~v~~l~fs~dg~~l~sgs~D~--~i~lWd~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 379 (446)
|...+..+.|+|||+++++++.|+ .|.+||+.+++... +........ ....+++++++.++++......+
T Consensus 240 ~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~--l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (662)
T 3azo_A 240 PEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQ--LCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGKGAAV 317 (662)
T ss_dssp TTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEE--SSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBSSSCE
T ss_pred CCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceee--cccccccccCccccccCceEeEeCCCEEEEEEEcCccE
Confidence 345688899999999888888888 55666665554221 111000000 02346777888888776546678
Q ss_pred EEEeec-CceEEEecccccceEEE-EEcCCCCEEEEeeCCCcEEEe--CCCCCC
Q 013274 380 AFDIWS-GKTCLTFRGHYEYVNCC-CFSSQDQELYTGGNDRQILVW--CPSRHI 429 (446)
Q Consensus 380 ~~d~~~-~~~~~~l~gH~~~v~~~-~fSpd~~~lvtgs~D~~v~vW--~~~~~~ 429 (446)
+|.+.. +.....+..|...+..+ +++++.-++++++.+....|| ++.+..
T Consensus 318 l~~~d~~~~~~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 318 LGILDPESGELVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp EEEEETTTTEEEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEECCCCcEEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 886542 34468888898888877 554444445566777666666 554443
No 169
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.62 E-value=2.6e-14 Score=137.58 Aligned_cols=278 Identities=9% Similarity=-0.006 Sum_probs=165.6
Q ss_pred cceeEEEeecCCCCEEEEeeC-CC--cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEE
Q 013274 44 GSINSLQVDLTEERYLLSGAS-DS--SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~-Dg--~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~ 120 (446)
..+.+++|+| +|++|+..+. ++ .|.+||+.++.... + ..++......+.|+| ++++|+
T Consensus 36 ~~~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~-------------l----~~~~~~~~~~~~~sp-dg~~l~ 96 (396)
T 3c5m_A 36 NYFYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQ-------------L----TEGKGDNTFGGFIST-DERAFF 96 (396)
T ss_dssp CCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEE-------------C----CCSSCBCTTTCEECT-TSSEEE
T ss_pred eeeecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEE-------------e----ecCCCCccccceECC-CCCEEE
Confidence 3478889997 5777766644 33 67788877643210 0 011111111234565 889999
Q ss_pred EEeCCCeEEEEECCCCeeeEEEecCCce-E---Eeeec-------------cCCCCceEEEEe-----eCCCcEEEEeCC
Q 013274 121 TGSYDHYVKVWDTNCTRVVMNFKMPGKV-Y---RTAMS-------------PLAASHMLIAAG-----TEDVQVRLCDIA 178 (446)
Q Consensus 121 s~s~D~~i~iWd~~~~~~~~~~~~~~~~-~---~~~~~-------------~~~~~~~~lasg-----s~d~~v~vwd~~ 178 (446)
.++.++.|.+||+.+++.......+... . .+.+. ...++...++.. ..+..|++||+.
T Consensus 97 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~ 176 (396)
T 3c5m_A 97 YVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIE 176 (396)
T ss_dssp EEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETT
T ss_pred EEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECC
Confidence 9999999999999988765544432221 1 11111 111111222221 345689999999
Q ss_pred CCceeeeeeCCCCCeEEEEEec-CCCeEEEEeeCC------CcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 179 SGAISQTLSGHRDGIMTVEWST-SSEWILVTGGCD------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 179 ~~~~~~~l~~h~~~v~sv~~s~-~~~~~l~S~s~D------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
+++..... .+...+..+.|+| +++.+ +..+.+ ..|.+||+..+.. +.+
T Consensus 177 ~g~~~~~~-~~~~~~~~~~~sp~dg~~l-~~~~~~~~~~~~~~l~~~d~~~~~~-~~l---------------------- 231 (396)
T 3c5m_A 177 TGELEVIH-QDTAWLGHPIYRPFDDSTV-GFCHEGPHDLVDARMWLVNEDGSNV-RKI---------------------- 231 (396)
T ss_dssp TCCEEEEE-EESSCEEEEEEETTEEEEE-EEEECSCSSSCSCCCEEEETTSCCC-EES----------------------
T ss_pred CCcEEeec-cCCcccccceECCCCCCEE-EEEecCCCCCCCceEEEEECCCCce-eEe----------------------
Confidence 88755443 5677889999999 66654 333333 3566676643210 000
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCccccccccccc-ccCeEEEEEccCCCEEEEeecC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAH-YGAVTGLKVTEDGMYLLSAGSD 330 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~fs~dg~~l~sgs~D 330 (446)
.... ...+..++|+|||++|+..+.+
T Consensus 232 -----------------------------------------------------~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 232 -----------------------------------------------------KEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp -----------------------------------------------------SCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred -----------------------------------------------------eccCCCccccceEECCCCCEEEEEecC
Confidence 0000 1136778999999988777554
Q ss_pred -----CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcC-CCcEEEEeC-----------------CCceEEEEeecCc
Q 013274 331 -----SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPC-----------------MTAVKAFDIWSGK 387 (446)
Q Consensus 331 -----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-----------------~~~~~~~d~~~~~ 387 (446)
+.|++||+.+++.... ... . . ....+++ ++..++... ...+.+||+.+++
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l--~~~---~-~-~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~ 331 (396)
T 3c5m_A 259 KGQTDRVIYKANPETLENEEV--MVM---P-P-CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS 331 (396)
T ss_dssp TTTCCEEEEEECTTTCCEEEE--EEC---C-S-EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB
T ss_pred CCCccceEEEEECCCCCeEEe--eeC---C-C-CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc
Confidence 4499999988753221 111 1 1 1267777 887766532 2467888887776
Q ss_pred eEEEeccccc-----------ceEEEEEcCCCCEEEEeeC-CCcEEEeCCC
Q 013274 388 TCLTFRGHYE-----------YVNCCCFSSQDQELYTGGN-DRQILVWCPS 426 (446)
Q Consensus 388 ~~~~l~gH~~-----------~v~~~~fSpd~~~lvtgs~-D~~v~vW~~~ 426 (446)
. ..+..|.. .+..++|||||++|+.++. ++...||..+
T Consensus 332 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 332 A-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp C-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred e-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 4 45555654 2567899999999887664 6677777543
No 170
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.57 E-value=1.4e-12 Score=122.81 Aligned_cols=274 Identities=9% Similarity=0.004 Sum_probs=179.8
Q ss_pred CCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEe
Q 013274 64 SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFK 143 (446)
Q Consensus 64 ~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~ 143 (446)
.+++|.+||.++++.... + ..... ..........+.+. ++.++++...+++|.+||..+++.+.++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~---i------~~~~n--~~~lg~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~~i~ 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENE---V------FYRAN--GFKLGDVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVGRIT 81 (328)
T ss_dssp CCBEEEEEETTTTEEECS---H------HHHHH--SSCCBSCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEEEEE
T ss_pred CCceEEEEECCCCEEhhh---h------Hhhhc--CcccCccceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEEEcC
Confidence 489999999987653110 0 00000 00111123344442 46677777778999999999999988886
Q ss_pred cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCC-----CCeEEEEEecCCCeEEEEee-CCCcEEE
Q 013274 144 MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHR-----DGIMTVEWSTSSEWILVTGG-CDGAIRF 217 (446)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~-----~~v~sv~~s~~~~~~l~S~s-~Dg~I~i 217 (446)
.......+++++. ..++++...++.|.+||+++++....+.... .....+++ .+ +.++++.. .+++|.+
T Consensus 82 ~~~~p~~i~~~~~---g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~-~~lyv~~~~~~~~v~v 156 (328)
T 3dsm_A 82 GFTSPRYIHFLSD---EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YG-KYVYVNCWSYQNRILK 156 (328)
T ss_dssp CCSSEEEEEEEET---TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ET-TEEEEEECTTCCEEEE
T ss_pred CCCCCcEEEEeCC---CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-EC-CEEEEEcCCCCCEEEE
Confidence 5556677777653 3455555478999999999998877665332 14456666 33 45566654 4889999
Q ss_pred EEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCC
Q 013274 218 WDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPG 297 (446)
Q Consensus 218 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (446)
+|+.+++....+..
T Consensus 157 iD~~t~~~~~~i~~------------------------------------------------------------------ 170 (328)
T 3dsm_A 157 IDTETDKVVDELTI------------------------------------------------------------------ 170 (328)
T ss_dssp EETTTTEEEEEEEC------------------------------------------------------------------
T ss_pred EECCCCeEEEEEEc------------------------------------------------------------------
Confidence 99987654433210
Q ss_pred cccccccccccccCeEEEEEccCCCEEEEeecC----------CcEEEEecCcCceeeeeeeEEEee-cCCCeEEEEcCC
Q 013274 298 MLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSD----------SRIRLWDVESGRNTLVNFETVRLQ-TSKPIQLATTQD 366 (446)
Q Consensus 298 ~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D----------~~i~lWd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 366 (446)
......+.++|+|+++++...+ +.|.++|..+++.. ...... ...+..++++++
T Consensus 171 -----------g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~----~~~~~~~g~~p~~la~~~d 235 (328)
T 3dsm_A 171 -----------GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVE----KQFKFKLGDWPSEVQLNGT 235 (328)
T ss_dssp -----------SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEE----EEEECCTTCCCEEEEECTT
T ss_pred -----------CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEE----EEEecCCCCCceeEEEecC
Confidence 0012346788999988777655 78999999876421 111211 125778899998
Q ss_pred CcEEEEeCCCceEEEEeecCceEE--EecccccceEEEEEcC-CCCEEEEe----eCCCcEEEeCCCCCCCCCcCCCc
Q 013274 367 PAVVFVPCMTAVKAFDIWSGKTCL--TFRGHYEYVNCCCFSS-QDQELYTG----GNDRQILVWCPSRHISDGVDAGP 437 (446)
Q Consensus 367 ~~~~~~~~~~~~~~~d~~~~~~~~--~l~gH~~~v~~~~fSp-d~~~lvtg----s~D~~v~vW~~~~~~~~~~~~~~ 437 (446)
+..+++... .+.+||..+++... .+..+......++++| +++..++. ..++.|.+|+++......+..|.
T Consensus 236 ~~~lyv~~~-~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~g~~~~~i~~G~ 312 (328)
T 3dsm_A 236 RDTLYWINN-DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQGKLIDEFYVGI 312 (328)
T ss_dssp SCEEEEESS-SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTTCCEEEEEEEEE
T ss_pred CCEEEEEcc-EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCCCCEEEEEEecc
Confidence 888888765 88889988777532 1222346789999999 56666777 67899999999955555555444
No 171
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=1.3e-12 Score=122.86 Aligned_cols=270 Identities=10% Similarity=0.071 Sum_probs=168.1
Q ss_pred ccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEE
Q 013274 43 KGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG 122 (446)
Q Consensus 43 ~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~ 122 (446)
++.|++|.|++ ++..+++.+.++.++.|..+... ...++...+.++.+.+ ++.+++++
T Consensus 5 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~-~g~l~~~~ 62 (333)
T 2dg1_A 5 QQDLPTLFYSG-KSNSAVPIISESELQTITAEPWL--------------------EISKKGLQLEGLNFDR-QGQLFLLD 62 (333)
T ss_dssp -CCCCBCCSCG-GGGCSSCCCCGGGSCEEECEEEE--------------------EEESSCCCEEEEEECT-TSCEEEEE
T ss_pred ccccceeeecC-CccceeEEeecccCcccccceeE--------------------EEeccCccccCcEECC-CCCEEEEE
Confidence 35678889986 45567777889999999322110 0112333455667765 77788888
Q ss_pred eCCCeEEEEECCCCeeeEEE-ecCCceEEeeeccCCCCceEEEEeeCC----CcEEEEeCCCCceeeeee--CCCCCeEE
Q 013274 123 SYDHYVKVWDTNCTRVVMNF-KMPGKVYRTAMSPLAASHMLIAAGTED----VQVRLCDIASGAISQTLS--GHRDGIMT 195 (446)
Q Consensus 123 s~D~~i~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d----~~v~vwd~~~~~~~~~l~--~h~~~v~s 195 (446)
..++.|.+||.++++..... .....+..+++.+. ..++++...+ +.|.+||.+++.....+. .+...+..
T Consensus 63 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~d---g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 139 (333)
T 2dg1_A 63 VFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKD---GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDD 139 (333)
T ss_dssp TTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTT---SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEE
T ss_pred CCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCC---CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccc
Confidence 89999999999887765433 23455777777764 3466665555 689999998886543333 34557899
Q ss_pred EEEecCCCeEEEEeeC------CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccc
Q 013274 196 VEWSTSSEWILVTGGC------DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKR 269 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~------Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (446)
+.++|+++ ++++... .+.|..+|..++... .+
T Consensus 140 i~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~---------------------------------------- 177 (333)
T 2dg1_A 140 MVFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFRTVT-PI---------------------------------------- 177 (333)
T ss_dssp EEECTTSC-EEEEECCCBTTBCCEEEEEECTTSCCEE-EE----------------------------------------
T ss_pred eEECCCCC-EEEEeccccccCCCceEEEEeCCCCEEE-Ee----------------------------------------
Confidence 99999987 4555443 133333333221110 00
Q ss_pred ccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCcEEEEecCc-Cceeeee
Q 013274 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRIRLWDVES-GRNTLVN 347 (446)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i~lWd~~~-~~~~~~~ 347 (446)
..+...+..++|+|||++| ++.+.++.|.+||+.+ +.. ...
T Consensus 178 ------------------------------------~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~-~~~ 220 (333)
T 2dg1_A 178 ------------------------------------IQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVT-IQP 220 (333)
T ss_dssp ------------------------------------EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSS-EEE
T ss_pred ------------------------------------ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcC-ccc
Confidence 0111236788999999855 5556788999999864 221 111
Q ss_pred ee-EE--Eeec-CCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEeccccc------ceEEEEEcCCCCEEEEeeC
Q 013274 348 FE-TV--RLQT-SKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYE------YVNCCCFSSQDQELYTGGN 416 (446)
Q Consensus 348 ~~-~~--~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~------~v~~~~fSpd~~~lvtgs~ 416 (446)
+. .. .... ..+..+++.+++.+.+... ...+.+|+. +++.+..+..+.. .+.+++|+||++.|+.++.
T Consensus 221 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~ 299 (333)
T 2dg1_A 221 FGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSN 299 (333)
T ss_dssp EEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEE
T ss_pred ccceEEEecCCCCCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeC
Confidence 11 00 1111 1344577888887665543 467899987 6776666655443 6899999999877764444
Q ss_pred C
Q 013274 417 D 417 (446)
Q Consensus 417 D 417 (446)
+
T Consensus 300 ~ 300 (333)
T 2dg1_A 300 D 300 (333)
T ss_dssp C
T ss_pred c
Confidence 4
No 172
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.56 E-value=6.7e-13 Score=139.02 Aligned_cols=164 Identities=14% Similarity=0.106 Sum_probs=107.7
Q ss_pred eeEeCCCccc-----eeEEEeecCCCCEEEEeeCC---------CcEEEEEcccCcCCCCCCccccccceEEeccccccC
Q 013274 36 KEIVSPHKGS-----INSLQVDLTEERYLLSGASD---------SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG 101 (446)
Q Consensus 36 ~~~~~~H~~~-----v~~l~~s~~~~~~l~s~s~D---------g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 101 (446)
..++.+|+.. .+.++||| |+++|+.++.+ +.+.+||++++... ...+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Sp-dg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~------------------~l~~ 109 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISP-DGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI------------------TEER 109 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECT-TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC------------------CSSC
T ss_pred EEEEechhhhhhcccccceEECC-CCCEEEEEECCeeeEEEccceEEEEEECCCCcEE------------------Eccc
Confidence 4456666532 34578897 68899999887 55669999876421 1234
Q ss_pred ccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCc---e-----------------EEeeeccCCCCce
Q 013274 102 HKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK---V-----------------YRTAMSPLAASHM 161 (446)
Q Consensus 102 h~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~---~-----------------~~~~~~~~~~~~~ 161 (446)
|...+....|+| ||+.||.++ |+.|.+||+.++...+ +...+. + ..+.++|++ .
T Consensus 110 ~~~~~~~~~~SP-dG~~la~~~-~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg---~ 183 (740)
T 4a5s_A 110 IPNNTQWVTWSP-VGHKLAYVW-NNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG---T 183 (740)
T ss_dssp CCTTEEEEEECS-STTCEEEEE-TTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS---S
T ss_pred CCCcceeeEECC-CCCEEEEEE-CCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcceEECCCC---C
Confidence 556788888887 888888875 6899999998876433 222221 1 125577654 3
Q ss_pred EEEEeeCC------------------------------------CcEEEEeCCC---Cc--eeeeee------CCCCCeE
Q 013274 162 LIAAGTED------------------------------------VQVRLCDIAS---GA--ISQTLS------GHRDGIM 194 (446)
Q Consensus 162 ~lasgs~d------------------------------------~~v~vwd~~~---~~--~~~~l~------~h~~~v~ 194 (446)
.||..+.| ..|++||+++ +. ....+. +|...+.
T Consensus 184 ~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 184 FLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 55554321 1588899998 73 223333 3788899
Q ss_pred EEEEecCCCeEEEEee---CCCcEEEEEccCCc
Q 013274 195 TVEWSTSSEWILVTGG---CDGAIRFWDIRRAG 224 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s---~Dg~I~iWd~~~~~ 224 (446)
.++|+|+++.++.... .+..|++||+.++.
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 9999999985333322 23479999987764
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.54 E-value=5.5e-12 Score=120.37 Aligned_cols=280 Identities=12% Similarity=0.037 Sum_probs=171.3
Q ss_pred CCCccceeEEEeecCCCCEEEEee----------CCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEE
Q 013274 40 SPHKGSINSLQVDLTEERYLLSGA----------SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSA 109 (446)
Q Consensus 40 ~~H~~~v~~l~~s~~~~~~l~s~s----------~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~ 109 (446)
..+..+ .++|+| ++++|..++ .|++|.+||+.+.+... .+..... .. .+......+
T Consensus 48 ~~g~~p--~i~~sp-dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~---------~i~~~~~-~~-~~g~~p~~i 113 (361)
T 2oiz_A 48 PTAFNG--HVQVSN-DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEK---------EISLPPK-RV-QGLNYDGLF 113 (361)
T ss_dssp ECCEEE--EEEECT-TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEE---------EEEECTT-BC-CBCCCGGGE
T ss_pred cCCCCC--ceEECC-CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEE---------EEEcCcc-cc-ccCCCcceE
Confidence 344444 899997 577777775 36789999987643210 0100000 00 011123345
Q ss_pred EEeecCCcEEEEEeC--CCeEEEEECCCCeeeEE-EecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC-Cceee-
Q 013274 110 IWYPVDTGLFVTGSY--DHYVKVWDTNCTRVVMN-FKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS-GAISQ- 184 (446)
Q Consensus 110 ~~~~~~~~~l~s~s~--D~~i~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~-~~~~~- 184 (446)
.++| ++++|+++.. +++|.+||+++++.+.. +...+. ..+.+.+.. ...+++.+.|+.+.+|+++. ++...
T Consensus 114 ~~sp-dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~--~~~~~~~~~dg~~~~v~~~~~g~~~~~ 189 (361)
T 2oiz_A 114 RQTT-DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNR--PRSFMTICGDGGLLTINLGEDGKVASQ 189 (361)
T ss_dssp EECT-TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTS--SSEEEEEETTSSEEEEEECTTSSEEEE
T ss_pred EECC-CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCC--CeeEEEECCCCcEEEEEECCCCcEeee
Confidence 5655 8888888764 68999999999988877 665443 223344543 24667788899999999875 55431
Q ss_pred -----eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 185 -----TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 185 -----~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
.+..+..++ .+.+++++..+ +..+.++.|.++|+...... .+.... .
T Consensus 190 ~~~~~~~~~~~~~~-~~~~~~~g~~~-~~~~~~~~v~v~d~~~~~~~-~~~~~~-------------------~------ 241 (361)
T 2oiz_A 190 SRSKQMFSVKDDPI-FIAPALDKDKA-HFVSYYGNVYSADFSGDEVK-VDGPWS-------------------L------ 241 (361)
T ss_dssp EECCCCSCTTTSCB-CSCCEECSSEE-EEEBTTSEEEEEECSSSSCE-EEEEEE-------------------S------
T ss_pred ccccceEcCCCCce-EEEecccCCEE-EEEeCCCeEEEEEecCCCce-eccccc-------------------c------
Confidence 222222222 33345666543 45567899999998643210 000000 0
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeec----------
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS---------- 329 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~---------- 329 (446)
......... .. ......++|+||++.+.....
T Consensus 242 -------------------------~~~~~~~~~-----------~~--p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~ 283 (361)
T 2oiz_A 242 -------------------------LNDEDKAKN-----------WV--PGGYNLVGLHRASGRMYVFMHPDGKEGTHKF 283 (361)
T ss_dssp -------------------------CCHHHHHTT-----------CE--ECCSSCEEEETTTTEEEEEEESSCCTTCTTC
T ss_pred -------------------------cCccccccc-----------cc--cCCeeEEEEecCCCeEEEEEccCCCcccccC
Confidence 000000000 00 000112579999887655432
Q ss_pred -CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecC--ceEEEecccccceEEEEEcC
Q 013274 330 -DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSG--KTCLTFRGHYEYVNCCCFSS 406 (446)
Q Consensus 330 -D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~--~~~~~l~gH~~~v~~~~fSp 406 (446)
+.+|.+||+.+++.. ..+... . +..++++|++..++++..+.+.+||..++ +.+.++..+-.....++|+|
T Consensus 284 ~~~~v~viD~~t~~~v----~~i~~~-~-p~~ia~spdg~~l~v~n~~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p 357 (361)
T 2oiz_A 284 PAAEIWVMDTKTKQRV----ARIPGR-D-ALSMTIDQQRNLMLTLDGGNVNVYDISQPEPKLLRTIEGAAEASLQVQFHP 357 (361)
T ss_dssp CCSEEEEEETTTTEEE----EEEECT-T-CCEEEEETTTTEEEEECSSCEEEEECSSSSCEEEEEETTSCSSEEEEEECC
T ss_pred CCceEEEEECCCCcEE----EEEecC-C-eeEEEECCCCCEEEEeCCCeEEEEECCCCcceeeEEeccCCCCcEEEEecC
Confidence 348999999987531 222222 2 77899999999998887788999999999 88888888888899999999
Q ss_pred CCC
Q 013274 407 QDQ 409 (446)
Q Consensus 407 d~~ 409 (446)
||+
T Consensus 358 ~G~ 360 (361)
T 2oiz_A 358 VGG 360 (361)
T ss_dssp CSC
T ss_pred CCC
Confidence 986
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.53 E-value=8.7e-13 Score=136.26 Aligned_cols=113 Identities=13% Similarity=0.170 Sum_probs=79.1
Q ss_pred ccccEeEEEEeecCCcEEEEEeCC----------CeEEEEECCC------CeeeEEE-ecCCceEEeeeccCCCCceEEE
Q 013274 102 HKYAISSAIWYPVDTGLFVTGSYD----------HYVKVWDTNC------TRVVMNF-KMPGKVYRTAMSPLAASHMLIA 164 (446)
Q Consensus 102 h~~~V~~~~~~~~~~~~l~s~s~D----------~~i~iWd~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~la 164 (446)
|...+.++.|+| |++.|++++.| .+|.+||+.+ +...... .....+....++|++ ..|+
T Consensus 128 ~~~~~~~~~~sp-Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG---~~la 203 (662)
T 3azo_A 128 GGLRWADPVLLP-ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDG---RQAV 203 (662)
T ss_dssp TCEEEEEEEEET-TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTS---SEEE
T ss_pred CCccccCcEECC-CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCC---CEEE
Confidence 566777888887 88899988887 6899999987 5543322 223344556677653 4566
Q ss_pred EeeCC--------CcEEEEeCC-CC---ceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEE
Q 013274 165 AGTED--------VQVRLCDIA-SG---AISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219 (446)
Q Consensus 165 sgs~d--------~~v~vwd~~-~~---~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd 219 (446)
.++.+ ..|++||++ ++ .......+|...+.++.|+|+++ ++++++.|+..+||.
T Consensus 204 ~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 204 WLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHR 269 (662)
T ss_dssp EEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEE
T ss_pred EEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEE
Confidence 55533 479999999 57 44444455678999999999998 678888888544443
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.53 E-value=5.1e-11 Score=119.90 Aligned_cols=298 Identities=14% Similarity=0.112 Sum_probs=190.1
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcc--cCcCCCCCCccccccceEEeccccccCccccEeEEEEee---cCCcEE
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQ--RATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYP---VDTGLF 119 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~---~~~~~l 119 (446)
.+..+.|+| ++++|.+++.|+.|.+||+. +.+.. ..+. .| .....+.+++ ++++++
T Consensus 198 ~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~~~t~~~v---------~~i~-------~G--~~P~~ia~s~~~~pDGk~l 258 (567)
T 1qks_A 198 AVHISRLSA-SGRYLFVIGRDGKVNMIDLWMKEPTTV---------AEIK-------IG--SEARSIETSKMEGWEDKYA 258 (567)
T ss_dssp CEEEEEECT-TSCEEEEEETTSEEEEEETTSSSCCEE---------EEEE-------CC--SEEEEEEECCSTTCTTTEE
T ss_pred CccceEECC-CCCEEEEEcCCCeEEEEECCCCCCcEe---------EEEe-------cC--CCCceeEEccccCCCCCEE
Confidence 466899997 68889899999999999985 33210 0010 11 1234567774 478877
Q ss_pred EEEeC-CCeEEEEECCCCeeeEEEecCC------------ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee--e
Q 013274 120 VTGSY-DHYVKVWDTNCTRVVMNFKMPG------------KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS--Q 184 (446)
Q Consensus 120 ~s~s~-D~~i~iWd~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~--~ 184 (446)
+++.+ +++|.++|..+.+++..+...+ .+..+..++.. ..+++.-..++.|.++|..+.+.. .
T Consensus 259 ~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~--~~~vv~~~~~g~v~~vd~~~~~~~~v~ 336 (567)
T 1qks_A 259 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR--PEFIVNVKETGKILLVDYTDLNNLKTT 336 (567)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS--SEEEEEETTTTEEEEEETTCSSEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC--CEEEEEecCCCeEEEEecCCCccceee
Confidence 76654 5999999999998887766432 23344455432 345566677899999998775422 2
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
.+ ........+.|+|++++++++...+++|.++|+.+++....+... +
T Consensus 337 ~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vg----g--------------------------- 384 (567)
T 1qks_A 337 EI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTG----G--------------------------- 384 (567)
T ss_dssp EE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECS----S---------------------------
T ss_pred ee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEecc----C---------------------------
Confidence 23 233456678999999998888778899999999887654433210 0
Q ss_pred CccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEee-cCCcEEEEecCcCc
Q 013274 265 APQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAG-SDSRIRLWDVESGR 342 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs-~D~~i~lWd~~~~~ 342 (446)
...|.+.-..+ ++|++. ..+++. .+++|.++|..+.+
T Consensus 385 ----------------------------------------~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 385 ----------------------------------------QTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp ----------------------------------------SSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTT
T ss_pred ----------------------------------------cCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCC
Confidence 01222211122 578744 445543 56899999988732
Q ss_pred ee---eeeeeEEEeecCCCeEEEEcCCCcEEEEeC--------CCceEEEEeecC-----ce-EEEec-c-------ccc
Q 013274 343 NT---LVNFETVRLQTSKPIQLATTQDPAVVFVPC--------MTAVKAFDIWSG-----KT-CLTFR-G-------HYE 397 (446)
Q Consensus 343 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d~~~~-----~~-~~~l~-g-------H~~ 397 (446)
.. ......+.........+.++|++..+++.. ...+.++|+.+. .. ...+. + -..
T Consensus 424 ~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 503 (567)
T 1qks_A 424 HPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQP 503 (567)
T ss_dssp CTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCC
T ss_pred CccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCc
Confidence 11 111223322233445677899999888865 237899999876 21 23332 1 135
Q ss_pred ceEEEEEcCCCCEEEEee-----CCCcEEEeCCCCCCCCCcCCC
Q 013274 398 YVNCCCFSSQDQELYTGG-----NDRQILVWCPSRHISDGVDAG 436 (446)
Q Consensus 398 ~v~~~~fSpd~~~lvtgs-----~D~~v~vW~~~~~~~~~~~~~ 436 (446)
.+..+.|+|||+.|...- .++.|.|.|..+.++..++.+
T Consensus 504 ~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 547 (567)
T 1qks_A 504 RVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIKD 547 (567)
T ss_dssp EEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred ceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeCC
Confidence 789999999998876442 378999999887765555443
No 176
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.50 E-value=7.9e-11 Score=118.53 Aligned_cols=276 Identities=13% Similarity=0.051 Sum_probs=183.3
Q ss_pred CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECC
Q 013274 55 EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN 134 (446)
Q Consensus 55 ~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 134 (446)
++.++++...+++|.++|..+++... .+. .| ..+..+.++| +++++++++.|+.|.+||+.
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~----------~i~------~g--~~p~~v~~Sp-DGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKT----------VLD------TG--YAVHISRLSA-SGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEE----------EEE------CS--SCEEEEEECT-TSCEEEEEETTSEEEEEETT
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEE----------EEe------CC--CCccceEECC-CCCEEEEEcCCCeEEEEECC
Confidence 45678888899999999998764210 000 11 1233556665 88999999999999999996
Q ss_pred --CCeeeEEEecCCceEEeeecc----CCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC----------CCC-CeEEEE
Q 013274 135 --CTRVVMNFKMPGKVYRTAMSP----LAASHMLIAAGTEDVQVRLCDIASGAISQTLSG----------HRD-GIMTVE 197 (446)
Q Consensus 135 --~~~~~~~~~~~~~~~~~~~~~----~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~----------h~~-~v~sv~ 197 (446)
+++.+..+........+++++ ++ ..++++...++.|.++|..+.+.+..+.. |.. .+.++.
T Consensus 227 ~~t~~~v~~i~~G~~P~~ia~s~~~~pDG--k~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 227 MKEPTTVAEIKIGSEARSIETSKMEGWED--KYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp SSSCCEEEEEECCSEEEEEEECCSTTCTT--TEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred CCCCcEeEEEecCCCCceeEEccccCCCC--CEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEE
Confidence 778887777655567788883 32 34555556679999999999988877652 222 577888
Q ss_pred EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCcee
Q 013274 198 WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVR 277 (446)
Q Consensus 198 ~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (446)
+++++..++++...+|.|.++|......+....
T Consensus 305 ~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~----------------------------------------------- 337 (567)
T 1qks_A 305 ASHYRPEFIVNVKETGKILLVDYTDLNNLKTTE----------------------------------------------- 337 (567)
T ss_dssp ECSSSSEEEEEETTTTEEEEEETTCSSEEEEEE-----------------------------------------------
T ss_pred EcCCCCEEEEEecCCCeEEEEecCCCccceeee-----------------------------------------------
Confidence 898877667777778999999976532211100
Q ss_pred ecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEe-ecCCcEEEEecCcCceeeeeeeE-E-Eee
Q 013274 278 QSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSA-GSDSRIRLWDVESGRNTLVNFET-V-RLQ 354 (446)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sg-s~D~~i~lWd~~~~~~~~~~~~~-~-~~~ 354 (446)
.........+.|+|+|++++++ ..+++|.++|+.+++.. ..+.. . ..+
T Consensus 338 ----------------------------i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~-~~i~vgg~~Ph 388 (567)
T 1qks_A 338 ----------------------------ISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLV-AIEDTGGQTPH 388 (567)
T ss_dssp ----------------------------EECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEE-EEEECSSSSBC
T ss_pred ----------------------------eeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEE-EEEeccCcCCC
Confidence 0001124567899999987655 46789999999987532 11111 0 011
Q ss_pred cCCCeEEEEcCCCcEEE-EeC--CCceEEEEeec-------CceEEEecccccceEEEEEcCCCCEEEEeeC-------C
Q 013274 355 TSKPIQLATTQDPAVVF-VPC--MTAVKAFDIWS-------GKTCLTFRGHYEYVNCCCFSSQDQELYTGGN-------D 417 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~-~~~--~~~~~~~d~~~-------~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~-------D 417 (446)
.+.... .+.|+...++ ++. ...+.++|..+ .+.+.++.+....-.-+.++||+++|..... .
T Consensus 389 pg~g~~-~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~ 467 (567)
T 1qks_A 389 PGRGAN-FVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEIS 467 (567)
T ss_dssp CTTCEE-EEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHH
T ss_pred Ccccee-eECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccC
Confidence 111222 2566644444 342 35789999887 6677787766444455789999999886553 3
Q ss_pred CcEEEeCCCCC
Q 013274 418 RQILVWCPSRH 428 (446)
Q Consensus 418 ~~v~vW~~~~~ 428 (446)
++|.|++..+.
T Consensus 468 ~~v~v~d~~~~ 478 (567)
T 1qks_A 468 GSVAVFDIKAM 478 (567)
T ss_dssp TCEEEEEGGGC
T ss_pred ceEEEEECCcc
Confidence 69999988765
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.49 E-value=1.8e-11 Score=113.18 Aligned_cols=229 Identities=10% Similarity=0.093 Sum_probs=148.8
Q ss_pred EeEEEEeecCCc-EEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 106 ISSAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 106 V~~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
..+++|.| +++ +++++..++.|..||..++ ...+.. .+.+..+++.+. ..++++...++.|.+||.++++..
T Consensus 30 ~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~d---g~l~v~~~~~~~i~~~d~~~g~~~ 103 (296)
T 3e5z_A 30 TEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQ---GHLIACSHGLRRLERQREPGGEWE 103 (296)
T ss_dssp EEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTT---CCEEEEETTTTEEEEECSTTCCEE
T ss_pred ccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCC---CcEEEEecCCCeEEEEcCCCCcEE
Confidence 44567776 565 7888889999999999877 444443 344666777664 346666666789999999888754
Q ss_pred eeeeCC----CCCeEEEEEecCCCeEEEEeeCCCc---------------EEEEEccCCceeEEeecccccccCCCcccc
Q 013274 184 QTLSGH----RDGIMTVEWSTSSEWILVTGGCDGA---------------IRFWDIRRAGCFRVLDQSQSQLGRRPPLLK 244 (446)
Q Consensus 184 ~~l~~h----~~~v~sv~~s~~~~~~l~S~s~Dg~---------------I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (446)
...... ...+..++++|+++ +++|.+..|+ -.||.+...+.+..
T Consensus 104 ~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~---------------- 166 (296)
T 3e5z_A 104 SIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSA---------------- 166 (296)
T ss_dssp EEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEE----------------
T ss_pred EEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCCCCEEE----------------
Confidence 333221 23456789999887 4566321111 12332221110000
Q ss_pred cceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE
Q 013274 245 RKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL 324 (446)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l 324 (446)
...+......++|+|||+.|
T Consensus 167 ------------------------------------------------------------~~~~~~~~~gi~~s~dg~~l 186 (296)
T 3e5z_A 167 ------------------------------------------------------------PIRDRVKPNGLAFLPSGNLL 186 (296)
T ss_dssp ------------------------------------------------------------EECCCSSEEEEEECTTSCEE
T ss_pred ------------------------------------------------------------eecCCCCCccEEECCCCCEE
Confidence 01122346789999999988
Q ss_pred EEeecCCcEEEEecC-cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEE
Q 013274 325 LSAGSDSRIRLWDVE-SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCC 403 (446)
Q Consensus 325 ~sgs~D~~i~lWd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~ 403 (446)
++.+.++.|.+||+. .++.. ............+..+++.+++.+.+.. ...+.+|+.. ++.+..+..+.. +++++
T Consensus 187 v~~~~~~~i~~~~~~~~g~~~-~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~-~~~~~ 262 (296)
T 3e5z_A 187 VSDTGDNATHRYCLNARGETE-YQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQT-TSNLC 262 (296)
T ss_dssp EEETTTTEEEEEEECSSSCEE-EEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSC-CCEEE
T ss_pred EEeCCCCeEEEEEECCCCcCc-CCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCC-ceeEE
Confidence 888889999999987 33320 0011111123345567888888866655 7788999874 888888888888 99999
Q ss_pred E-cCCCCEEEEeeCCCcEE
Q 013274 404 F-SSQDQELYTGGNDRQIL 421 (446)
Q Consensus 404 f-Spd~~~lvtgs~D~~v~ 421 (446)
| +||++.|+.++.++..+
T Consensus 263 f~~~d~~~L~v~t~~~l~~ 281 (296)
T 3e5z_A 263 FGGPEGRTLYMTVSTEFWS 281 (296)
T ss_dssp EESTTSCEEEEEETTEEEE
T ss_pred EECCCCCEEEEEcCCeEEE
Confidence 9 58999998888875433
No 178
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.49 E-value=1.1e-12 Score=126.11 Aligned_cols=235 Identities=9% Similarity=-0.033 Sum_probs=143.9
Q ss_pred EEEeecCCcEEEEEeC-CCe--EEEEECCCCeeeEEEecCCc-eEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 109 AIWYPVDTGLFVTGSY-DHY--VKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 109 ~~~~~~~~~~l~s~s~-D~~--i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
..|+| |+++|+.++. |+. |.+||+.+++........+. .....++|+ ...|+.++.+..|++||+.+++...
T Consensus 41 ~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spd---g~~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 41 KCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPD---DDALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp CCBCT-TSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTT---SSEEEEEETTTEEEEEETTTCCEEE
T ss_pred ccCCC-CCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCC---CCEEEEEeCCCeEEEEECCCCccee
Confidence 34555 8888888887 664 88889988876554333222 223456664 4578888888899999999998766
Q ss_pred eeeCCCCCeEEEE--EecCCCeEEEEe----------------------eCCCcEEEEEccCCceeEEeecccccccCCC
Q 013274 185 TLSGHRDGIMTVE--WSTSSEWILVTG----------------------GCDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240 (446)
Q Consensus 185 ~l~~h~~~v~sv~--~s~~~~~~l~S~----------------------s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~ 240 (446)
.+..+...+.... ++|+++. ++.. ..+..|.+||+.++....
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~------------- 182 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTV------------- 182 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEE-------------
T ss_pred eeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEE-------------
Confidence 6666666554443 4788775 3321 123445555554432110
Q ss_pred cccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-
Q 013274 241 PLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE- 319 (446)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~- 319 (446)
...+...+..+.|+|
T Consensus 183 ----------------------------------------------------------------l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 183 ----------------------------------------------------------------ILQENQWLGHPIYRPY 198 (388)
T ss_dssp ----------------------------------------------------------------EEEESSCEEEEEEETT
T ss_pred ----------------------------------------------------------------eecCCccccccEECCC
Confidence 112334578899999
Q ss_pred CCCEEEEeecC------CcEEEEecCcCceeeeeeeEEEeec--CCCeEEEEcCCCcEEEE-eC--CC---ceEEEEeec
Q 013274 320 DGMYLLSAGSD------SRIRLWDVESGRNTLVNFETVRLQT--SKPIQLATTQDPAVVFV-PC--MT---AVKAFDIWS 385 (446)
Q Consensus 320 dg~~l~sgs~D------~~i~lWd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~-~~--~~---~~~~~d~~~ 385 (446)
||+.|+..+.+ ..|.++|+.++..... . ... .....++++|++..++. .. .. .+.+||+.+
T Consensus 199 dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~---~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 199 DDSTVAFCHEGPHDLVDARMWLINEDGTNMRKV--K---THAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp EEEEEEEEECSCTTTSSCSEEEEETTSCCCEES--C---CCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred CCCEEEEEEecCCCCCcceEEEEeCCCCceEEe--e---eCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 99988877653 3788888766532111 1 011 11234678999885543 32 11 388999988
Q ss_pred Cce--EEEecccccc---eEEEEEcCCCCEEEEe---------eCCCcEEEeCCCCCCC
Q 013274 386 GKT--CLTFRGHYEY---VNCCCFSSQDQELYTG---------GNDRQILVWCPSRHIS 430 (446)
Q Consensus 386 ~~~--~~~l~gH~~~---v~~~~fSpd~~~lvtg---------s~D~~v~vW~~~~~~~ 430 (446)
++. +..+.++... ...++|||||++|+.. ..+..|.+|++++...
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (388)
T 3pe7_A 274 LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ 332 (388)
T ss_dssp CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE
T ss_pred CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce
Confidence 874 3345442211 1224799999998843 5567899999987643
No 179
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=2.8e-11 Score=114.32 Aligned_cols=257 Identities=9% Similarity=0.080 Sum_probs=156.9
Q ss_pred cceeEEEeecCCCCEEEEee---------CCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec
Q 013274 44 GSINSLQVDLTEERYLLSGA---------SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s---------~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~ 114 (446)
..+..+++ +|+.|+... .++.|.+||++++... .+ ..+....|+|
T Consensus 15 ~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~------------~l----------~~~~~~~~Sp- 68 (347)
T 2gop_A 15 AYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNARR------------FI----------ENATMPRISP- 68 (347)
T ss_dssp CEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE------------EE----------ESCEEEEECT-
T ss_pred EEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCceE------------Ec----------ccCCCeEECC-
Confidence 34566666 456665532 2667999998764310 00 2355667776
Q ss_pred CCcEEEEEeCC---C--eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeC---------------------
Q 013274 115 DTGLFVTGSYD---H--YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTE--------------------- 168 (446)
Q Consensus 115 ~~~~l~s~s~D---~--~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~--------------------- 168 (446)
++++|+.++.+ + .|.+||+.+++......... +..+.++|++ ..|+.++.
T Consensus 69 Dg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg---~~l~~~~~~~~~~~~~~~~~~~~~~~~g~ 144 (347)
T 2gop_A 69 DGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDS---RKLLIVGFKRREDEDFIFEDDVPAWFDDL 144 (347)
T ss_dssp TSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTS---SEEEEEEECCCC---------CCCC----
T ss_pred CCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCC---CEEEEEEccCCCcCCcEEEcccceeecCc
Confidence 88888877654 3 37888898887665554444 6777888754 34444432
Q ss_pred ------CCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCC-------cEEEEEccCCceeEEeeccccc
Q 013274 169 ------DVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDG-------AIRFWDIRRAGCFRVLDQSQSQ 235 (446)
Q Consensus 169 ------d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg-------~I~iWd~~~~~~~~~~~~~~~~ 235 (446)
...|++||+.+++.+..+.. . .+..+.|+|++ ++++++.++ ...||.+.++. ...+
T Consensus 145 ~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l------ 213 (347)
T 2gop_A 145 GFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKM------ 213 (347)
T ss_dssp -----CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETTE-EEEE------
T ss_pred ccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCCc-eEEe------
Confidence 25799999999877455555 3 78899999998 456665542 44555443221 1110
Q ss_pred ccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEE
Q 013274 236 LGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGL 315 (446)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 315 (446)
..+ ..+..+
T Consensus 214 ----------------------------------------------------------------------~~~-~~~~~~ 222 (347)
T 2gop_A 214 ----------------------------------------------------------------------FEK-VSFYAV 222 (347)
T ss_dssp ----------------------------------------------------------------------EEE-ESEEEE
T ss_pred ----------------------------------------------------------------------ccC-cceeeE
Confidence 011 234433
Q ss_pred EEccCCCEEEEeecCC--------cEEEEecCcCceeeeeeeEEEeecCCCeE-EEEcCCCcEEEEeC-CCceEEEEeec
Q 013274 316 KVTEDGMYLLSAGSDS--------RIRLWDVESGRNTLVNFETVRLQTSKPIQ-LATTQDPAVVFVPC-MTAVKAFDIWS 385 (446)
Q Consensus 316 ~fs~dg~~l~sgs~D~--------~i~lWd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~d~~~ 385 (446)
+|||++|+.++.+. .|.+|| +++.... ... ....... +.++ ++ +++.+. ....++| +.+
T Consensus 223 --spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l-~~~---~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 223 --DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI-LDE---VDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp --EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES-STT---CCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred --CCCCCEEEEEEccccCCccccceEEEEC--CCceEec-ccc---CCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 89999888777553 677787 4332111 000 0011122 5566 66 655543 3578899 876
Q ss_pred CceEEEecccccceEEEEEcCCCCEEEEeeCCCcE-EEeCCC
Q 013274 386 GKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI-LVWCPS 426 (446)
Q Consensus 386 ~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v-~vW~~~ 426 (446)
++. ..+..+...|.+++|+| +++++++.++.. +||..+
T Consensus 292 g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 292 GEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp SSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred Cce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 665 44445688899999999 788888777765 888665
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.48 E-value=3.2e-11 Score=125.67 Aligned_cols=247 Identities=11% Similarity=0.049 Sum_probs=154.1
Q ss_pred cCccccEeEEEEeecCCcEEEEEeCCC-----eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCc---
Q 013274 100 HGHKYAISSAIWYPVDTGLFVTGSYDH-----YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQ--- 171 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~s~s~D~-----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~--- 171 (446)
.+|...+....|+| |+++||.++.++ +|++||+.+++.+........+..+++++++ ..|+.++.+..
T Consensus 121 ~~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg---~~l~~~~~~~~~~~ 196 (710)
T 2xdw_A 121 DDGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDG---KGMFYNAYPQQDGK 196 (710)
T ss_dssp TTSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTS---SEEEEEECCCCSSC
T ss_pred cCCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCC---CEEEEEEECCcccc
Confidence 35666777888886 888888665543 8999999998876532211123456777753 45666666654
Q ss_pred -------------EEEEeCCCCce----eeeeeCCCCCeEEEEEecCCCeEEEEeeC----CCcEEEEEccC------Cc
Q 013274 172 -------------VRLCDIASGAI----SQTLSGHRDGIMTVEWSTSSEWILVTGGC----DGAIRFWDIRR------AG 224 (446)
Q Consensus 172 -------------v~vwd~~~~~~----~~~l~~h~~~v~sv~~s~~~~~~l~S~s~----Dg~I~iWd~~~------~~ 224 (446)
|++|++.++.. +.....|...+.++.|+|++++++++... +..|.+||+.+ +.
T Consensus 197 ~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 276 (710)
T 2xdw_A 197 SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGI 276 (710)
T ss_dssp CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSS
T ss_pred ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCc
Confidence 99999988752 22223356668899999999986555431 56899999864 11
Q ss_pred -eeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccc
Q 013274 225 -CFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQD 303 (446)
Q Consensus 225 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (446)
.+..+
T Consensus 277 ~~~~~l-------------------------------------------------------------------------- 282 (710)
T 2xdw_A 277 LKWVKL-------------------------------------------------------------------------- 282 (710)
T ss_dssp CCCEEE--------------------------------------------------------------------------
T ss_pred cceEEe--------------------------------------------------------------------------
Confidence 01000
Q ss_pred cccccccCeEEEEEccCCCEEEEeecC----CcEEEEecCcCceeeeeeeEEEeecC--CCeEEEEcCCCcEEEEeCCC-
Q 013274 304 RATAHYGAVTGLKVTEDGMYLLSAGSD----SRIRLWDVESGRNTLVNFETVRLQTS--KPIQLATTQDPAVVFVPCMT- 376 (446)
Q Consensus 304 ~~~~h~~~v~~l~fs~dg~~l~sgs~D----~~i~lWd~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~- 376 (446)
..+...+.. .|+|+|..|+..+.+ ..|.+||+.++.... ...+..... ....+.++++..++++...+
T Consensus 283 --~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 283 --IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK--WKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp --ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG--CEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred --eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc--ceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 011122222 478888876655543 369999998753100 011111111 12234555566666655332
Q ss_pred --ceEEEEeecCceEEEecccccceEEEEEcCCCCEEE-Eee---CCCcEEEeCCCCCC
Q 013274 377 --AVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELY-TGG---NDRQILVWCPSRHI 429 (446)
Q Consensus 377 --~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lv-tgs---~D~~v~vW~~~~~~ 429 (446)
.+.+|++.+++....+..|.+.|..++++||++.|+ +.+ ..++|.+|++.+..
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 456677767887888888888999999999997665 333 34779999987654
No 181
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.46 E-value=8.2e-10 Score=101.53 Aligned_cols=279 Identities=9% Similarity=0.063 Sum_probs=176.8
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFV 120 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~ 120 (446)
.+...+.+|++++ ++++.++...++.|.+||.. +... ... ...+...+.++.+.+ ++.+++
T Consensus 12 ~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~-------------~~~---~~~~~~~~~~i~~~~-~g~l~v 72 (299)
T 2z2n_A 12 NQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKIT-------------EYP---LPTPDAKVMCLTISS-DGEVWF 72 (299)
T ss_dssp SSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEE-------------EEE---CSSTTCCEEEEEECT-TSCEEE
T ss_pred CcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeE-------------Eec---CCcccCceeeEEECC-CCCEEE
Confidence 4556799999986 57777777778999999976 3210 000 011224566666654 677777
Q ss_pred EEeCCCeEEEEECCCCeeeEEEecC---CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee-eeeCCCCCeEEE
Q 013274 121 TGSYDHYVKVWDTNCTRVVMNFKMP---GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ-TLSGHRDGIMTV 196 (446)
Q Consensus 121 s~s~D~~i~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~-~l~~h~~~v~sv 196 (446)
+...++.|..||.. ++. ..+..+ .....+++.+. ..++++...++.|.+||. ++.... .+..+...+..+
T Consensus 73 ~~~~~~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i 146 (299)
T 2z2n_A 73 TENAANKIGRITKK-GII-KEYTLPNPDSAPYGITEGPN---GDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFI 146 (299)
T ss_dssp EETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECTT---SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEE
T ss_pred eCCCCCeEEEECCC-CcE-EEEeCCCcCCCceeeEECCC---CCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceE
Confidence 77778899999986 332 333322 23556666543 346666666789999998 554432 233455678999
Q ss_pred EEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCce
Q 013274 197 EWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGV 276 (446)
Q Consensus 197 ~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (446)
++++++. ++++...++.|..||. ++.... +.
T Consensus 147 ~~~~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~---------------------------------------------- 177 (299)
T 2z2n_A 147 TLGSDNA-LWFTENQNNAIGRITE-SGDITE-FK---------------------------------------------- 177 (299)
T ss_dssp EECTTSC-EEEEETTTTEEEEECT-TCCEEE-EE----------------------------------------------
T ss_pred EEcCCCC-EEEEeCCCCEEEEEcC-CCcEEE-ee----------------------------------------------
Confidence 9999886 5666666788999987 432111 00
Q ss_pred eecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecC
Q 013274 277 RQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTS 356 (446)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~ 356 (446)
...+...+.+++++++|.++++...++.|..||. +++... + .......
T Consensus 178 ----------------------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~--~-~~~~~~~ 225 (299)
T 2z2n_A 178 ----------------------------IPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITE--F-KIPTPNA 225 (299)
T ss_dssp ----------------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE--E-ECSSTTC
T ss_pred ----------------------------CCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEE--E-ECCCCCC
Confidence 0001123678999999998887777889999998 554211 1 1111123
Q ss_pred CCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEE-EecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 357 KPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 357 ~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~-~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
.+..+++.+++.+.+.. ....+..|+. +++... .+.++...+.++++ +++++.++.+ .+.|..+++.+.
T Consensus 226 ~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~~~ 296 (299)
T 2z2n_A 226 RPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLIKD 296 (299)
T ss_dssp CEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC--
T ss_pred CceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcCcc
Confidence 45567788887765554 3467888887 454322 24566678999999 9999888776 455666666543
No 182
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=9.3e-12 Score=129.41 Aligned_cols=245 Identities=10% Similarity=0.012 Sum_probs=147.0
Q ss_pred cCccccEeEEEEeecCCcEEE-----EEeCCCeEEEEECCCCeeeEEEecCCc-eEEeeeccCCCCceEEEEeeCCCc--
Q 013274 100 HGHKYAISSAIWYPVDTGLFV-----TGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTEDVQ-- 171 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~-----s~s~D~~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lasgs~d~~-- 171 (446)
.+|...+.+..++| |+++|| +|+++.+|++||+++++.+......+. ...+++++++ ..|+.++.|..
T Consensus 117 ~~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspDg---~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 117 KDGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPDS---KGFYYEWLPTDPS 192 (695)
T ss_dssp SSSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTTS---SEEEEEECCCCTT
T ss_pred cCCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCcccccceEEecCC---CEEEEEEecCCCC
Confidence 46777788888886 888888 566678999999999886511112111 1456677753 46777777665
Q ss_pred -----------EEEEeCCCCc----eeeeeeCCCCCeEEEEEecCCCeEEEEeeCC-C--cEEEEEccCCceeEEeeccc
Q 013274 172 -----------VRLCDIASGA----ISQTLSGHRDGIMTVEWSTSSEWILVTGGCD-G--AIRFWDIRRAGCFRVLDQSQ 233 (446)
Q Consensus 172 -----------v~vwd~~~~~----~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D-g--~I~iWd~~~~~~~~~~~~~~ 233 (446)
|++|++.++. ++....+|...+.++.|+|++++++++...+ + .|.+||..++.. +.+
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l---- 267 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLL---- 267 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEE----
T ss_pred CccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEe----
Confidence 9999999875 3334445667889999999999865544433 3 444444322110 000
Q ss_pred ccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeE
Q 013274 234 SQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVT 313 (446)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 313 (446)
..+...+.
T Consensus 268 ------------------------------------------------------------------------~~~~~~~~ 275 (695)
T 2bkl_A 268 ------------------------------------------------------------------------VKGVGAKY 275 (695)
T ss_dssp ------------------------------------------------------------------------EECSSCCE
T ss_pred ------------------------------------------------------------------------ecCCCceE
Confidence 01112233
Q ss_pred EEEEccCCCEEEEee---cCCcEEEEecCcCceeeeeeeEEEeec-CC-CeEEEEcCCCcEEEEeC-CCceEEEEee-cC
Q 013274 314 GLKVTEDGMYLLSAG---SDSRIRLWDVESGRNTLVNFETVRLQT-SK-PIQLATTQDPAVVFVPC-MTAVKAFDIW-SG 386 (446)
Q Consensus 314 ~l~fs~dg~~l~sgs---~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~-~~~~~~~d~~-~~ 386 (446)
...+ ++|.++++.. .+++|.+||+.++.... ...+.... .. ...+.++ ++.++++.. ....++|.+. ++
T Consensus 276 ~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~--~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g 351 (695)
T 2bkl_A 276 EVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARAS--WKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKG 351 (695)
T ss_dssp EEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGG--CEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTC
T ss_pred EEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccC--CeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCC
Confidence 3344 5565444443 35889999998753200 00111111 11 1223444 444555443 3345666554 46
Q ss_pred ceEEEeccc-ccceEEEEEcCCCCEEE----EeeCCCcEEEeCCCCCC
Q 013274 387 KTCLTFRGH-YEYVNCCCFSSQDQELY----TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 387 ~~~~~l~gH-~~~v~~~~fSpd~~~lv----tgs~D~~v~vW~~~~~~ 429 (446)
+....+..+ .+.|..++++||++.|+ +....++|.+|++.++.
T Consensus 352 ~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 352 KPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp CEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 666777766 77888999999998777 34445789999987654
No 183
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=1.3e-10 Score=106.42 Aligned_cols=216 Identities=10% Similarity=0.065 Sum_probs=152.4
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC-CCC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH-RDG 192 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h-~~~ 192 (446)
+++|++++.|+.|.+||.++++.+.++.... ..+.+.+.+. ..+++ +.++.|+.||. +++.++.+..+ ...
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd---G~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~ 78 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA---GEILF--SYSKGAKMITR-DGRELWNIAAPAGCE 78 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT---SCEEE--ECBSEEEEECT-TSCEEEEEECCTTCE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC---CCEEE--eCCCCEEEECC-CCCEEEEEcCCCCcc
Confidence 5789999999999999999999998888654 4667777764 34666 34778999999 89999988865 357
Q ss_pred eEEEEEecCCCeEEEEeeC-CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccccc
Q 013274 193 IMTVEWSTSSEWILVTGGC-DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSA 271 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~-Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (446)
+.++.+.++++. +++.+. ++.|..+|. +++.+..+....
T Consensus 79 ~~~~~~~~dG~~-lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~-------------------------------------- 118 (276)
T 3no2_A 79 MQTARILPDGNA-LVAWCGHPSTILEVNM-KGEVLSKTEFET-------------------------------------- 118 (276)
T ss_dssp EEEEEECTTSCE-EEEEESTTEEEEEECT-TSCEEEEEEECC--------------------------------------
T ss_pred ccccEECCCCCE-EEEecCCCCEEEEEeC-CCCEEEEEeccC--------------------------------------
Confidence 889999999985 566665 667777774 444332221000
Q ss_pred CCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEE
Q 013274 272 NGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETV 351 (446)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~ 351 (446)
. ...+......+++.++|.+|++...+++|..||.. ++... .+
T Consensus 119 -----------------~---------------~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w-~~--- 161 (276)
T 3no2_A 119 -----------------G---------------IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLN-SV--- 161 (276)
T ss_dssp -----------------S---------------CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEE-EE---
T ss_pred -----------------C---------------CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEE-EE---
Confidence 0 00011123344678999999999999999999987 65321 11
Q ss_pred EeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccc------cceEEEEEcCCCCEEEEee
Q 013274 352 RLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHY------EYVNCCCFSSQDQELYTGG 415 (446)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~------~~v~~~~fSpd~~~lvtgs 415 (446)
.. ...+..+...+++.+++.... ..+..+|..+|+.+-++..+. ..+..++..++|..+++.+
T Consensus 162 ~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 162 KL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EC-SSCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EC-CCCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 11 223445666777777776654 468889988899988886543 3378999999999998874
No 184
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.40 E-value=2.7e-10 Score=107.09 Aligned_cols=253 Identities=10% Similarity=0.052 Sum_probs=161.8
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeC
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~ 124 (446)
....|.+. ++++.++...+++|.+||.++++... .+ ........+++.+ ++.++++...
T Consensus 45 ~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~~~------------~i------~~~~~p~~i~~~~-~g~lyv~~~~ 103 (328)
T 3dsm_A 45 VAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKEVG------------RI------TGFTSPRYIHFLS-DEKAYVTQIW 103 (328)
T ss_dssp CEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCEEE------------EE------ECCSSEEEEEEEE-TTEEEEEEBS
T ss_pred cceEEEEE--CCEEEEEEcCCCEEEEEECcccEEEE------------Ec------CCCCCCcEEEEeC-CCeEEEEECC
Confidence 35678775 46777888888999999998764310 00 0112344566655 5656566558
Q ss_pred CCeEEEEECCCCeeeEEEecCC------ceEEeeeccCCCCceEEEEee-CCCcEEEEeCCCCceeeeeeCCCCCeEEEE
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPG------KVYRTAMSPLAASHMLIAAGT-EDVQVRLCDIASGAISQTLSGHRDGIMTVE 197 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~lasgs-~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~ 197 (446)
++.|.+||+.+++....+.... ....+++ .+..++++.. .++.|.++|+++++....+... .....+.
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~----~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~ 178 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ----YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLV 178 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE----ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCE
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE----ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceE
Confidence 9999999999999887777544 4444444 1334555554 4889999999999888777643 3346788
Q ss_pred EecCCCeEEEEeeCC----------CcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 198 WSTSSEWILVTGGCD----------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 198 ~s~~~~~~l~S~s~D----------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
++|+++ +++++..+ +.|.++|..+++..+.+..
T Consensus 179 ~~~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~------------------------------------ 221 (328)
T 3dsm_A 179 MDKYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKF------------------------------------ 221 (328)
T ss_dssp ECTTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEEC------------------------------------
T ss_pred EcCCCC-EEEEECCCccCCccccCCceEEEEECCCCeEEEEEec------------------------------------
Confidence 999887 45666554 7899999876543322210
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
........|+|+||+++|..... .|.+||+.+++.....
T Consensus 222 ---------------------------------------~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 222 ---------------------------------------KLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp ---------------------------------------CTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSC
T ss_pred ---------------------------------------CCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeee
Confidence 00013678999999988876544 8999999876531111
Q ss_pred eeEEEeecCCCeEEEEcCCCcEEEEeC------CCceEEEEeecCceEEEecccccceEEEEEc
Q 013274 348 FETVRLQTSKPIQLATTQDPAVVFVPC------MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFS 405 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fS 405 (446)
+ .......+..+++.|+...++++. ...+.+||.. ++.+.++..-. ....++|-
T Consensus 261 ~--~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~G~-~P~~~~~~ 320 (328)
T 3dsm_A 261 F--LEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYVGI-IPGAFCWK 320 (328)
T ss_dssp S--BCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEEEE-SEEEEEEE
T ss_pred e--ecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEecc-CcceEEEe
Confidence 1 111123456678888544444443 2468888886 88777775432 23555553
No 185
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.39 E-value=9.9e-11 Score=110.08 Aligned_cols=210 Identities=10% Similarity=0.169 Sum_probs=144.0
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEecc----ccccCccccEeEEEEeecCC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDK----QHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~gh~~~V~~~~~~~~~~ 116 (446)
++....+.|++++ +++++++.+.++.|++||.+..... +..+.. ....++-.....+++.|.++
T Consensus 88 ~~~~~p~gia~d~-~g~l~v~d~~~~~v~~~~~~g~~~~-----------~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g 155 (329)
T 3fvz_A 88 NLFYLPHGLSIDT-DGNYWVTDVALHQVFKLDPHSKEGP-----------LLILGRSMQPGSDQNHFCQPTDVAVEPSTG 155 (329)
T ss_dssp TTCSSEEEEEECT-TSCEEEEETTTTEEEEECTTCSSCC-----------SEEESBTTBCCCSTTCCSSEEEEEECTTTC
T ss_pred CccCCceEEEECC-CCCEEEEECCCCEEEEEeCCCCeEE-----------EEEecccCCCCCCccccCCCcEEEEeCCCC
Confidence 4455788999996 6778999999999999997543100 000000 00123444567777876577
Q ss_pred cEEEEEe-CCCeEEEEECCCCeeeEEEecCC-----------ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 117 GLFVTGS-YDHYVKVWDTNCTRVVMNFKMPG-----------KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 117 ~~l~s~s-~D~~i~iWd~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
.++++.+ .++.|++|| .++..+..+...+ ....+++.+. ...++++...++.|++||.++++.+.
T Consensus 156 ~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~--~g~l~v~d~~~~~I~~~~~~~G~~~~ 232 (329)
T 3fvz_A 156 AVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH--LDQLCVADRENGRIQCFKTDTKEFVR 232 (329)
T ss_dssp CEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETT--TTEEEEEETTTTEEEEEETTTCCEEE
T ss_pred eEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC--CCEEEEEECCCCEEEEEECCCCcEEE
Confidence 7888886 699999999 4566665553211 1456666653 24677888889999999999898888
Q ss_pred eee--CCCCCeEEEEEecCCCeEEEE-------eeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecccccc
Q 013274 185 TLS--GHRDGIMTVEWSTSSEWILVT-------GGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 185 ~l~--~h~~~v~sv~~s~~~~~~l~S-------~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
.+. ++...+.+++|+| + .++++ .+.+.+|++||+.+++.+..+..
T Consensus 233 ~~~~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~------------------------ 286 (329)
T 3fvz_A 233 EIKHASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKP------------------------ 286 (329)
T ss_dssp EECCTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECC------------------------
T ss_pred EEeccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcC------------------------
Confidence 774 5667889999998 2 22333 23345899999877655443310
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEE
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRL 335 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~l 335 (446)
..++...+..|+|+|+|..+++...+++|++
T Consensus 287 -------------------------------------------------~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 287 -------------------------------------------------VRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp -------------------------------------------------SSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred -------------------------------------------------CCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 0123345788999999998999999999999
Q ss_pred EecCc
Q 013274 336 WDVES 340 (446)
Q Consensus 336 Wd~~~ 340 (446)
|++..
T Consensus 318 ~~~~~ 322 (329)
T 3fvz_A 318 FTLTE 322 (329)
T ss_dssp EEEEE
T ss_pred EeCCc
Confidence 99764
No 186
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.37 E-value=3.2e-09 Score=101.47 Aligned_cols=242 Identities=13% Similarity=0.063 Sum_probs=152.4
Q ss_pred EEEEeecCCcEEEEEe----------CCCeEEEEECCCCeeeEEEecC--------CceEEeeeccCCCCceEEEEee-C
Q 013274 108 SAIWYPVDTGLFVTGS----------YDHYVKVWDTNCTRVVMNFKMP--------GKVYRTAMSPLAASHMLIAAGT-E 168 (446)
Q Consensus 108 ~~~~~~~~~~~l~s~s----------~D~~i~iWd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~lasgs-~ 168 (446)
.+.++| |+++++.+. .+++|.+||+.+.+.+..+... .....+.++++. .+|+.++ .
T Consensus 70 ~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG---~~l~v~n~~ 145 (373)
T 2mad_H 70 NPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNN---ADLLFFQFA 145 (373)
T ss_pred CeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCC---CEEEEEecC
Confidence 345665 788877775 4788999999988888777654 123456677653 3455544 2
Q ss_pred -CCcEEEEeCCCCceeee-eeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccc
Q 013274 169 -DVQVRLCDIASGAISQT-LSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRK 246 (446)
Q Consensus 169 -d~~v~vwd~~~~~~~~~-l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (446)
++.|.++| ++++.+.. +.-. + ++.+.|+++..+++.+.||++.++|+ +++............
T Consensus 146 ~~~~v~viD-~t~~~~~~~i~~~-~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~---------- 209 (373)
T 2mad_H 146 AGPAVGLVV-QGGSSDDQLLSSP-T---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLT---------- 209 (373)
T ss_pred CCCeEEEEE-CCCCEEeEEcCCC-c---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEecccccc----------
Confidence 57899999 99988777 6432 1 24556676666778889999999998 665332110000000
Q ss_pred eeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccC-eEEEEEccCCCEEE
Q 013274 247 VSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGA-VTGLKVTEDGMYLL 325 (446)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~fs~dg~~l~ 325 (446)
+ ..+ .....|.+++..++
T Consensus 210 ------------------------------------------------------------~-~~p~~~~~~~~~~~~~~~ 228 (373)
T 2mad_H 210 ------------------------------------------------------------A-AQNLLTQPAQANKSGRIV 228 (373)
T ss_pred ------------------------------------------------------------C-CcceeecceeEecCCEEE
Confidence 0 000 11234555554333
Q ss_pred EeecCCcEEEEecCcCceeee-eeeE-------EEeecCCCeEEEEcCCCcEEEEeCC-----------CceEEEEeecC
Q 013274 326 SAGSDSRIRLWDVESGRNTLV-NFET-------VRLQTSKPIQLATTQDPAVVFVPCM-----------TAVKAFDIWSG 386 (446)
Q Consensus 326 sgs~D~~i~lWd~~~~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~~~~ 386 (446)
-.+..+.+.+.|+.+...... .+.. ..........+++++++..+++... +.+.++|..++
T Consensus 229 ~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~ 308 (373)
T 2mad_H 229 WPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG 308 (373)
T ss_pred EEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC
Confidence 333677888888875432211 1110 0011122333678888888777542 36888999999
Q ss_pred ceEEEecccccceEEEEEcCCCC-EEEEee-CCCcEEEeCCCCCCCC
Q 013274 387 KTCLTFRGHYEYVNCCCFSSQDQ-ELYTGG-NDRQILVWCPSRHISD 431 (446)
Q Consensus 387 ~~~~~l~gH~~~v~~~~fSpd~~-~lvtgs-~D~~v~vW~~~~~~~~ 431 (446)
+.+.++..-. ...+++|||||+ +|+++. .+++|.|+|+.+.+..
T Consensus 309 ~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 309 QTSSQISLGH-DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred EEEEEEECCC-CcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 9888875332 579999999999 788877 5899999999877643
No 187
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.37 E-value=5.4e-10 Score=102.49 Aligned_cols=203 Identities=13% Similarity=0.183 Sum_probs=136.6
Q ss_pred CccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-------CceEEeeeccCCCCceEEEEeeC-CCcE
Q 013274 101 GHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-------GKVYRTAMSPLAASHMLIAAGTE-DVQV 172 (446)
Q Consensus 101 gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~lasgs~-d~~v 172 (446)
+|-..+.++++.+ ++.++++.+.++.|++||.+ +..+..+... .....+++.. .+..++++... ++.|
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~--~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVR--NSGDIIVTERSPTHQI 102 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEET--TTTEEEEEECGGGCEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEc--CCCeEEEEcCCCCCEE
Confidence 4555666777765 67788888889999999987 5555555421 1345555522 23445555533 7899
Q ss_pred EEEeCCCCceeeeee-CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeecc
Q 013274 173 RLCDIASGAISQTLS-GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISK 251 (446)
Q Consensus 173 ~vwd~~~~~~~~~l~-~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (446)
++|| .+++.+..+. .+...+..++++|+++ ++++...++.|.+||.. +..+..+..
T Consensus 103 ~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~~~~~~-------------------- 159 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQN-GNVLHKFGC-------------------- 159 (286)
T ss_dssp EEEC-TTSCEEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTT-SCEEEEEEC--------------------
T ss_pred EEEC-CCCcEEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCC-CCEEEEeCC--------------------
Confidence 9999 5666666664 3456789999999986 56777778999999954 222111100
Q ss_pred ccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC
Q 013274 252 SLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS 331 (446)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~ 331 (446)
.++...+..|+++++|.++++.+.++
T Consensus 160 ------------------------------------------------------~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 160 ------------------------------------------------------SKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp ------------------------------------------------------TTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred ------------------------------------------------------CCccCCcEEEEECCCCCEEEEECCCC
Confidence 01123478899999999888888899
Q ss_pred cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEE
Q 013274 332 RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQEL 411 (446)
Q Consensus 332 ~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~l 411 (446)
.|++||.... . . .... ..++...+..++|+|+|+++
T Consensus 186 ~i~~~~~~g~-~-~---~~~~---------------------------------------~~g~~~~p~~i~~d~~G~l~ 221 (286)
T 1q7f_A 186 CVKVFNYEGQ-Y-L---RQIG---------------------------------------GEGITNYPIGVGINSNGEIL 221 (286)
T ss_dssp EEEEEETTCC-E-E---EEES---------------------------------------CTTTSCSEEEEEECTTCCEE
T ss_pred EEEEEcCCCC-E-E---EEEc---------------------------------------cCCccCCCcEEEECCCCCEE
Confidence 9999997432 1 0 0000 01233567889999999998
Q ss_pred EEeeCCC-cEEEeCCCCC
Q 013274 412 YTGGNDR-QILVWCPSRH 428 (446)
Q Consensus 412 vtgs~D~-~v~vW~~~~~ 428 (446)
++...++ .|.+|+++..
T Consensus 222 v~~~~~~~~i~~~~~~g~ 239 (286)
T 1q7f_A 222 IADNHNNFNLTIFTQDGQ 239 (286)
T ss_dssp EEECSSSCEEEEECTTSC
T ss_pred EEeCCCCEEEEEECCCCC
Confidence 8888886 9999997654
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=1.6e-10 Score=104.88 Aligned_cols=238 Identities=10% Similarity=0.030 Sum_probs=150.1
Q ss_pred cEeEEEEeecCCcEEE-EEeCCCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc
Q 013274 105 AISSAIWYPVDTGLFV-TGSYDHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~-s~s~D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~ 181 (446)
...++.+.+ ++.+++ +.+.++.|.+||..+..... +... .....+++.+. ..++++.. ++.|.+||.+++.
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~~-~~~~~~~~p~~i~~~~~---g~l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTTV-LPFNGLYQPQGLAVDGA---GTVYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----EE-CCCCSCCSCCCEEECTT---CCEEEEET-TTEEEEECTTCSC
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccce-EeeCCcCCcceeEECCC---CCEEEEcC-CCEEEEEeCCCce
Confidence 344555554 677777 55778999999976544321 2111 23344555543 33555554 8899999987765
Q ss_pred eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 182 ~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
...........+..+++++++. ++++...++.|.+||..+......
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~~~~~~--------------------------------- 144 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSKTQTVL--------------------------------- 144 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCCSCEEC---------------------------------
T ss_pred EeeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCceeEee---------------------------------
Confidence 4322223336789999999886 567777778899886432110000
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~ 341 (446)
.......+.+|+++++|+++++...++.|.+||....
T Consensus 145 -------------------------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 145 -------------------------------------------PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp -------------------------------------------CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred -------------------------------------------ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 0001123566889999998888878889999998765
Q ss_pred ceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcE
Q 013274 342 RNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQI 420 (446)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v 420 (446)
....... .....+..+++.+++.+.++.. ...+..|+............+...+.+++|+|||+++++.+.++.|
T Consensus 182 ~~~~~~~----~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 182 NQVVLPF----TDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp CEEECCC----SSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred ceEeecc----cCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 4211100 0113455678888876555544 3578888875544333333455678999999999999999999999
Q ss_pred EEeCCCCCC
Q 013274 421 LVWCPSRHI 429 (446)
Q Consensus 421 ~vW~~~~~~ 429 (446)
++++++.+.
T Consensus 258 ~~~~~~~~~ 266 (270)
T 1rwi_B 258 VKLTSLEHH 266 (270)
T ss_dssp EEECCCGGG
T ss_pred EEEcCCCcc
Confidence 999987554
No 189
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.35 E-value=1.2e-10 Score=121.30 Aligned_cols=159 Identities=12% Similarity=0.109 Sum_probs=104.2
Q ss_pred CCccceeEEEeecCCCCEEEEeeCCC-----cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASDS-----SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~Dg-----~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
+|+..+.+++||| +|++|+.++.++ +|++||+++++... . .. .+ ..+..+.|+| |
T Consensus 122 ~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~----------~-~~------~~-~~~~~~~wsp-D 181 (710)
T 2xdw_A 122 DGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELP----------D-VL------ER-VKFSCMAWTH-D 181 (710)
T ss_dssp TSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEE----------E-EE------EE-ECSCCEEECT-T
T ss_pred CCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCc----------c-cc------cC-cccceEEEEe-C
Confidence 4556788999996 678888775543 89999998764310 0 00 01 1144567876 8
Q ss_pred CcEEEEEeCCCe----------------EEEEECCCCeee--EEEec---CCceEEeeeccCCCCceEEEEeeC-----C
Q 013274 116 TGLFVTGSYDHY----------------VKVWDTNCTRVV--MNFKM---PGKVYRTAMSPLAASHMLIAAGTE-----D 169 (446)
Q Consensus 116 ~~~l~s~s~D~~----------------i~iWd~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~~~lasgs~-----d 169 (446)
++.|+.++.|.. |.+|++.+++.. ..+.. ........+++++ ..|+.++. +
T Consensus 182 g~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg---~~l~~~~~~~~~~~ 258 (710)
T 2xdw_A 182 GKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG---RYVLLSIREGCDPV 258 (710)
T ss_dssp SSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS---CEEEEEEECSSSSC
T ss_pred CCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC---CEEEEEEEccCCCc
Confidence 888988888876 999999887632 22232 2234567777754 34444332 5
Q ss_pred CcEEEEeCCC------Cc-eeeeeeCCCCCeEEEEEecCCCeEEEEeeCC---CcEEEEEccCC
Q 013274 170 VQVRLCDIAS------GA-ISQTLSGHRDGIMTVEWSTSSEWILVTGGCD---GAIRFWDIRRA 223 (446)
Q Consensus 170 ~~v~vwd~~~------~~-~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D---g~I~iWd~~~~ 223 (446)
..|++||+.+ +. ....+..+...+.. .|+|+++.+++.+..+ +.|.+||+.++
T Consensus 259 ~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~ 321 (710)
T 2xdw_A 259 NRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDP 321 (710)
T ss_dssp CEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSC
T ss_pred cEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 7899999987 53 46677777777665 4788888766555443 36888887653
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.35 E-value=1e-09 Score=101.30 Aligned_cols=242 Identities=12% Similarity=0.021 Sum_probs=149.2
Q ss_pred eCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcE
Q 013274 39 VSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGL 118 (446)
Q Consensus 39 ~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~ 118 (446)
+..+.....++.|++++..+++++..++.|..||.+++ .. . ...+...+.++.+.+ ++.+
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~-----------~-------~~~~~~~~~~l~~~~-dg~l 82 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS-----------P-------EMHPSHHQNGHCLNK-QGHL 82 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE-----------E-------EESSCSSEEEEEECT-TCCE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE-----------E-------EECCCCCcceeeECC-CCcE
Confidence 34455667899999754338889999999999998754 10 0 012334566667665 7778
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEec-CC----ceEEeeeccCCCCceEEEE----ee-------------CCCcEEEEe
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKM-PG----KVYRTAMSPLAASHMLIAA----GT-------------EDVQVRLCD 176 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~las----gs-------------~d~~v~vwd 176 (446)
+++...++.|.+||..+++....... .+ .++.+++.+. ..++++ |+ ..+.|..+|
T Consensus 83 ~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~---G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 83 IACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPD---GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp EEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTT---SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred EEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCC---CCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 87777789999999987775433221 11 1234555553 345665 32 123555555
Q ss_pred CCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCcee-EEeecccccccCCCcccccceeecccccc
Q 013274 177 IASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF-RVLDQSQSQLGRRPPLLKRKVSISKSLSA 255 (446)
Q Consensus 177 ~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (446)
.. +. ...+..+......++|+|+++.+ ++.+.++.|.+||+...+.+ ....
T Consensus 160 ~~-g~-~~~~~~~~~~~~gi~~s~dg~~l-v~~~~~~~i~~~~~~~~g~~~~~~~------------------------- 211 (296)
T 3e5z_A 160 PD-GT-LSAPIRDRVKPNGLAFLPSGNLL-VSDTGDNATHRYCLNARGETEYQGV------------------------- 211 (296)
T ss_dssp TT-SC-EEEEECCCSSEEEEEECTTSCEE-EEETTTTEEEEEEECSSSCEEEEEE-------------------------
T ss_pred CC-CC-EEEeecCCCCCccEEECCCCCEE-EEeCCCCeEEEEEECCCCcCcCCCe-------------------------
Confidence 54 33 44455667778999999999865 88888899999998621111 0000
Q ss_pred CCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEE
Q 013274 256 GQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRL 335 (446)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~l 335 (446)
. . ..+.+.+.+|+++++|+++++. ++.|.+
T Consensus 212 ----------------------------~---------~-----------~~~~~~p~~i~~d~~G~l~v~~--~~~v~~ 241 (296)
T 3e5z_A 212 ----------------------------H---------F-----------TVEPGKTDGLRVDAGGLIWASA--GDGVHV 241 (296)
T ss_dssp ----------------------------E---------E-----------CCSSSCCCSEEEBTTSCEEEEE--TTEEEE
T ss_pred ----------------------------E---------e-----------eCCCCCCCeEEECCCCCEEEEc--CCeEEE
Confidence 0 0 0011234568899999977766 788999
Q ss_pred EecCcCceeeeeeeEEEeecCCCeEEEE-cCCCcEEEEeCCCceEEEEeecCc
Q 013274 336 WDVESGRNTLVNFETVRLQTSKPIQLAT-TQDPAVVFVPCMTAVKAFDIWSGK 387 (446)
Q Consensus 336 Wd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~ 387 (446)
||.. ++. + ........ +..+++ .+++..+++.+...+..++..+.+
T Consensus 242 ~~~~-g~~-~---~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~ 288 (296)
T 3e5z_A 242 LTPD-GDE-L---GRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRG 288 (296)
T ss_dssp ECTT-SCE-E---EEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCB
T ss_pred ECCC-CCE-E---EEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEccccc
Confidence 9986 332 1 12222223 556667 577777877766554444544444
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.34 E-value=9.6e-12 Score=119.51 Aligned_cols=262 Identities=8% Similarity=0.023 Sum_probs=134.9
Q ss_pred EeEEEEeecCCcEEEEEeCC---CeEEEEECCCCeeeEEEecCCceEE-eeeccCCCCceEEEEeeCCCcEEEEeCCCCc
Q 013274 106 ISSAIWYPVDTGLFVTGSYD---HYVKVWDTNCTRVVMNFKMPGKVYR-TAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D---~~i~iWd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~ 181 (446)
+..+.++| ++++|+..+.+ ..|.+||+.+++............. ..++| +...|+..+.++.|++||+.+++
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~sp---dg~~l~~~~~~~~l~~~d~~~~~ 113 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFIST---DERAFFYVKNELNLMKVDLETLE 113 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECT---TSSEEEEEETTTEEEEEETTTCC
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECC---CCCEEEEEEcCCcEEEEECCCCC
Confidence 33445665 78887766543 4788889988775433222222111 34555 44578888888899999999987
Q ss_pred eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 182 ~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
.......+.. |+|+++. |+..+.+....+|+.... ...-+. ..........
T Consensus 114 ~~~~~~~~~~------~~~~g~~-l~~~~~~~~~~~~~~~~~---------~spdg~-------~~~~~~~~~~------ 164 (396)
T 3c5m_A 114 EQVIYTVDEE------WKGYGTW-VANSDCTKLVGIEILKRD---------WQPLTS-------WEKFAEFYHT------ 164 (396)
T ss_dssp EEEEEECCTT------EEEEEEE-EECTTSSEEEEEEEEGGG---------CCCCCS-------HHHHHHHHHT------
T ss_pred cEEEEecccc------cCCCCCE-EEeccCCccccccccccc---------cCCCCc-------ceeeeeeccC------
Confidence 6555554443 4455543 344444444444431000 000000 0000000000
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEcc-CCCEEEEeecC------CcEE
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTE-DGMYLLSAGSD------SRIR 334 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~-dg~~l~sgs~D------~~i~ 334 (446)
... ..+..+.... +. ......+...+..+.|+| +|..|+..+.+ ..|.
T Consensus 165 ----------~~~----~~l~~~d~~~--------g~---~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~ 219 (396)
T 3c5m_A 165 ----------NPT----CRLIKVDIET--------GE---LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMW 219 (396)
T ss_dssp ----------CCC----EEEEEEETTT--------CC---EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCE
T ss_pred ----------CCc----ceEEEEECCC--------Cc---EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEE
Confidence 000 0000000000 00 000112344578899999 78876665543 4688
Q ss_pred EEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC----CCc--eEEEEeecCceEEEecccccceEEEEEcC-C
Q 013274 335 LWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC----MTA--VKAFDIWSGKTCLTFRGHYEYVNCCCFSS-Q 407 (446)
Q Consensus 335 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~d~~~~~~~~~l~gH~~~v~~~~fSp-d 407 (446)
+||+.++.... +.. .........++++|++..++... ... +.+||+.+++...... ... .. ++|+| |
T Consensus 220 ~~d~~~~~~~~--l~~-~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~d 293 (396)
T 3c5m_A 220 LVNEDGSNVRK--IKE-HAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFD 293 (396)
T ss_dssp EEETTSCCCEE--SSC-CCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSS
T ss_pred EEECCCCceeE--eec-cCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCC
Confidence 88887653211 100 00001233467889887554432 123 8889988776533221 111 23 89999 9
Q ss_pred CCEEEEee----------------CCCcEEEeCCCCCCCC
Q 013274 408 DQELYTGG----------------NDRQILVWCPSRHISD 431 (446)
Q Consensus 408 ~~~lvtgs----------------~D~~v~vW~~~~~~~~ 431 (446)
|++|++++ .+..|.+|++.+....
T Consensus 294 g~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 333 (396)
T 3c5m_A 294 GSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQ 333 (396)
T ss_dssp SSEEEEEECCC----------CCCCCCEEEEEETTTTBCC
T ss_pred CceEEEecCCcceeeccccccccCCCCcEEEEecccCceE
Confidence 99998765 3478999998766543
No 192
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=5.3e-10 Score=102.25 Aligned_cols=144 Identities=12% Similarity=0.123 Sum_probs=98.7
Q ss_pred CCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCcc-ccEeEEEEeecCCcEEEEEeCCCeEEEEECC
Q 013274 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHK-YAISSAIWYPVDTGLFVTGSYDHYVKVWDTN 134 (446)
Q Consensus 56 ~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~-~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 134 (446)
+++|++++.|+.|.+||.++++.. ... ..+. ..+.++.+.| ++++++ +.++.|..||.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~------------w~~-----~~~~~~~~~~~~~~p-dG~ilv--s~~~~V~~~d~- 63 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIV------------WEY-----PLEKGWECNSVAATK-AGEILF--SYSKGAKMITR- 63 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEE------------EEE-----ECCTTCCCCEEEECT-TSCEEE--ECBSEEEEECT-
T ss_pred CcEEEeeCCCCEEEEEECCCCeEE------------EEe-----CCCccCCCcCeEECC-CCCEEE--eCCCCEEEECC-
Confidence 689999999999999998776521 111 1121 2344555665 788888 45789999999
Q ss_pred CCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeC-CCcEEEEeCCCCceeeeee------CCCCCeEEEEEecCCCeE
Q 013274 135 CTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTE-DVQVRLCDIASGAISQTLS------GHRDGIMTVEWSTSSEWI 205 (446)
Q Consensus 135 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~-d~~v~vwd~~~~~~~~~l~------~h~~~v~sv~~s~~~~~~ 205 (446)
+++.+..+.... .+..+.+.+ +..++++.+. ++.|..+|. +|+.++.+. ++......+++.++++.
T Consensus 64 ~G~~~W~~~~~~~~~~~~~~~~~---dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~- 138 (276)
T 3no2_A 64 DGRELWNIAAPAGCEMQTARILP---DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNY- 138 (276)
T ss_dssp TSCEEEEEECCTTCEEEEEEECT---TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCE-
T ss_pred CCCEEEEEcCCCCccccccEECC---CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCE-
Confidence 788888887642 455555554 3346666665 677888886 666665553 22234556778888874
Q ss_pred EEEeeCCCcEEEEEccCCcee
Q 013274 206 LVTGGCDGAIRFWDIRRAGCF 226 (446)
Q Consensus 206 l~S~s~Dg~I~iWd~~~~~~~ 226 (446)
+++...++.|..||.. ++.+
T Consensus 139 lv~~~~~~~v~~~d~~-G~~~ 158 (276)
T 3no2_A 139 LVPLFATSEVREIAPN-GQLL 158 (276)
T ss_dssp EEEETTTTEEEEECTT-SCEE
T ss_pred EEEecCCCEEEEECCC-CCEE
Confidence 6888899999999986 5543
No 193
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.33 E-value=2.8e-10 Score=106.82 Aligned_cols=228 Identities=12% Similarity=0.092 Sum_probs=147.2
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCe
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGI 193 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v 193 (446)
++..+++.+.++.++.|. +.....+.. ......+++.+. ..+++++..++.|.+||.++++.......+...+
T Consensus 16 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~ 89 (333)
T 2dg1_A 16 KSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQ---GQLFLLDVFEGNIFKINPETKEIKRPFVSHKANP 89 (333)
T ss_dssp GGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTT---SCEEEEETTTCEEEEECTTTCCEEEEEECSSSSE
T ss_pred CccceeEEeecccCcccc---cceeEEEeccCccccCcEECCC---CCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCc
Confidence 444556667788899992 333333332 233456667653 3477788888999999999887665554567889
Q ss_pred EEEEEecCCCeEEEEeeCC----CcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccc
Q 013274 194 MTVEWSTSSEWILVTGGCD----GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKR 269 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~D----g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (446)
.+++++|+++ ++++...+ +.|.+||..++.....+..
T Consensus 90 ~~i~~~~dg~-l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~-------------------------------------- 130 (333)
T 2dg1_A 90 AAIKIHKDGR-LFVCYLGDFKSTGGIFAATENGDNLQDIIED-------------------------------------- 130 (333)
T ss_dssp EEEEECTTSC-EEEEECTTSSSCCEEEEECTTSCSCEEEECS--------------------------------------
T ss_pred ceEEECCCCc-EEEEeCCCCCCCceEEEEeCCCCEEEEEEcc--------------------------------------
Confidence 9999999987 45666655 6899998765432111000
Q ss_pred ccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeec------CCcEEEEecCcCce
Q 013274 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS------DSRIRLWDVESGRN 343 (446)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~------D~~i~lWd~~~~~~ 343 (446)
..+...+..++++|+|.++++... .+.|..+|..+++.
T Consensus 131 ------------------------------------~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 131 ------------------------------------LSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp ------------------------------------SSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE
T ss_pred ------------------------------------CccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE
Confidence 001234788999999998887654 24566666554432
Q ss_pred eeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEeec-CceEE--------EecccccceEEEEEcCCCCEEE
Q 013274 344 TLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWS-GKTCL--------TFRGHYEYVNCCCFSSQDQELY 412 (446)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~-~~~~~--------~l~gH~~~v~~~~fSpd~~~lv 412 (446)
.. +. .....+..+++++++..+++.. ...+.+|++.+ +.... .+.++ ..+..++++++|++++
T Consensus 175 ~~--~~---~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v 248 (333)
T 2dg1_A 175 TP--II---QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYV 248 (333)
T ss_dssp EE--EE---EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEE
T ss_pred EE--ee---cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEE
Confidence 11 11 1122345678888887665543 35788899863 33322 22333 4678999999999999
Q ss_pred EeeCCCcEEEeCCCCCC
Q 013274 413 TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 413 tgs~D~~v~vW~~~~~~ 429 (446)
+...++.|.+|+++...
T Consensus 249 ~~~~~~~v~~~d~~g~~ 265 (333)
T 2dg1_A 249 AMYGQGRVLVFNKRGYP 265 (333)
T ss_dssp EEETTTEEEEECTTSCE
T ss_pred EEcCCCEEEEECCCCCE
Confidence 88888999999996543
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=9.2e-11 Score=121.89 Aligned_cols=158 Identities=11% Similarity=0.026 Sum_probs=101.4
Q ss_pred CCccceeEEEeecCCCCEEE-----EeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLL-----SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~-----s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
+|+..+.+++||| +|++|| +|+.+.+|++||+++++... ... ..+.+ ...+.|+| |
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~--------------~~~~~--~~~~~wsp-D 178 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDV--------------IEGGK--YATPKWTP-D 178 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCC--------------BSCCT--TCCCEECT-T
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC-Ccc--------------cCccc--ccceEEec-C
Confidence 5666899999996 678888 56666789999998875320 000 01111 13456776 8
Q ss_pred CcEEEEEeCCCe-------------EEEEECCCCee--eEEEecC---CceEEeeeccCCCCceEEEEeeCCC----cEE
Q 013274 116 TGLFVTGSYDHY-------------VKVWDTNCTRV--VMNFKMP---GKVYRTAMSPLAASHMLIAAGTEDV----QVR 173 (446)
Q Consensus 116 ~~~l~s~s~D~~-------------i~iWd~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~lasgs~d~----~v~ 173 (446)
++.|+.++.|.. |++|++.+++. ...+... .......+++++ .+|+.++.++ .|+
T Consensus 179 g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~l~ 255 (695)
T 2bkl_A 179 SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG---KYLFVYILRGWSENDVY 255 (695)
T ss_dssp SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS---CCEEEEEEETTTEEEEE
T ss_pred CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC---CEEEEEEeCCCCceEEE
Confidence 889999998877 99999988762 2223221 345667788754 3444444333 677
Q ss_pred EEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEee---CCCcEEEEEccCC
Q 013274 174 LCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGG---CDGAIRFWDIRRA 223 (446)
Q Consensus 174 vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s---~Dg~I~iWd~~~~ 223 (446)
+||..++. ...+..+...+....+ ++++ +++++. .++.|.+||+.++
T Consensus 256 ~~~~~~~~-~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 256 WKRPGEKD-FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EECTTCSS-CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred EEcCCCCc-eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 77765554 4455566666677666 5666 566655 3578999987653
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.32 E-value=1e-09 Score=114.92 Aligned_cols=242 Identities=12% Similarity=-0.002 Sum_probs=140.3
Q ss_pred CccccEeEEEEeecCCcEEEEEeCC-----CeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCC-----
Q 013274 101 GHKYAISSAIWYPVDTGLFVTGSYD-----HYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDV----- 170 (446)
Q Consensus 101 gh~~~V~~~~~~~~~~~~l~s~s~D-----~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~----- 170 (446)
+|...+....|+| |+++||.++.+ .+|++||+++++.+...........++++++ ..|+.++.+.
T Consensus 160 ~~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD----~~l~~~~~~~~~~~~ 234 (741)
T 1yr2_A 160 DGATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN----DALLYSRFAEPKEGQ 234 (741)
T ss_dssp ---EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT----SEEEEEECCCC----
T ss_pred CCCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC----CEEEEEEecCccccc
Confidence 4555677778886 88888876654 4699999999887543111111134566664 3455555544
Q ss_pred ---------cEEEEeCCCCce----eeeeeCCCCCeEEEEEecCCCeEEEEeeC----CCcEEEEEccCC--ceeEEeec
Q 013274 171 ---------QVRLCDIASGAI----SQTLSGHRDGIMTVEWSTSSEWILVTGGC----DGAIRFWDIRRA--GCFRVLDQ 231 (446)
Q Consensus 171 ---------~v~vwd~~~~~~----~~~l~~h~~~v~sv~~s~~~~~~l~S~s~----Dg~I~iWd~~~~--~~~~~~~~ 231 (446)
.|++|++.++.. +.....|...+.++.|+|+++++++++.. ...|.+||+.++ .++..+.
T Consensus 235 ~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~- 313 (741)
T 1yr2_A 235 AFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALI- 313 (741)
T ss_dssp ----CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEE-
T ss_pred ccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEec-
Confidence 389999987752 22223344468899999999976554432 347899988654 1011110
Q ss_pred ccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccC
Q 013274 232 SQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGA 311 (446)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 311 (446)
.+...
T Consensus 314 ---------------------------------------------------------------------------~~~~~ 318 (741)
T 1yr2_A 314 ---------------------------------------------------------------------------PDLKA 318 (741)
T ss_dssp ---------------------------------------------------------------------------CSSSS
T ss_pred ---------------------------------------------------------------------------CCCCc
Confidence 01111
Q ss_pred eEEEEEccCCCEEEEeec----CCcEEEEecCcCc-eeeeeeeEEEeecCCCe-EEEEcCCCcEEEEeC-CCceEEEEee
Q 013274 312 VTGLKVTEDGMYLLSAGS----DSRIRLWDVESGR-NTLVNFETVRLQTSKPI-QLATTQDPAVVFVPC-MTAVKAFDIW 384 (446)
Q Consensus 312 v~~l~fs~dg~~l~sgs~----D~~i~lWd~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~d~~ 384 (446)
+... ++|+|..|+..+. ++.|.+||+.++. ... .+........ .+.+. +..+++... ....++|.+.
T Consensus 319 ~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~----~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 319 QWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFD----TVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFD 392 (741)
T ss_dssp CEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEE----EEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEE
T ss_pred eEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccE----EEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 2222 3488887776665 3459999988742 111 1111111111 23333 344444443 2344555553
Q ss_pred -cCceEEEecc-cccceEEEEEcCCCCEEE----EeeCCCcEEEeCCCCCC
Q 013274 385 -SGKTCLTFRG-HYEYVNCCCFSSQDQELY----TGGNDRQILVWCPSRHI 429 (446)
Q Consensus 385 -~~~~~~~l~g-H~~~v~~~~fSpd~~~lv----tgs~D~~v~vW~~~~~~ 429 (446)
+++....+.. +.+.|..++++||++.|+ +....++|.+|++.++.
T Consensus 393 ~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 393 LDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp TTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred CCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 5666666765 367889999999998666 33345789999987654
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.31 E-value=4.8e-10 Score=105.77 Aligned_cols=200 Identities=10% Similarity=0.085 Sum_probs=121.8
Q ss_pred CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCC---C--cEEEEeCCCCceeeeeeCCCCCeEEEEEe
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTED---V--QVRLCDIASGAISQTLSGHRDGIMTVEWS 199 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d---~--~v~vwd~~~~~~~~~l~~h~~~v~sv~~s 199 (446)
+..|.+||+.+++... + ..+....++|++ ..|+..+.+ + .|.+||+++++.......+ . +.++.|+
T Consensus 42 ~~~l~~~d~~~~~~~~-l---~~~~~~~~SpDg---~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-~-~~~~~ws 112 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-I---ENATMPRISPDG---KKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-N-IRSLEWN 112 (347)
T ss_dssp EEEEEEEETTTCCEEE-E---ESCEEEEECTTS---SEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-E-EEEEEEC
T ss_pred cceEEEEeCCCCceEE-c---ccCCCeEECCCC---CEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-C-ccceeEC
Confidence 6789999999876533 2 345667888754 345555432 2 4888899888755444433 3 9999999
Q ss_pred cCCCeEEEEeeCC---------------------------CcEEEEEccCCceeEEeecccccccCCCcccccceeeccc
Q 013274 200 TSSEWILVTGGCD---------------------------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKS 252 (446)
Q Consensus 200 ~~~~~~l~S~s~D---------------------------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (446)
|+++.+ +.++.+ ..|.+||+.++...+.
T Consensus 113 pdg~~l-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~------------------------ 167 (347)
T 2gop_A 113 EDSRKL-LIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE------------------------ 167 (347)
T ss_dssp TTSSEE-EEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE------------------------
T ss_pred CCCCEE-EEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee------------------------
Confidence 999875 444422 2233333332211000
Q ss_pred cccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCC-
Q 013274 253 LSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDS- 331 (446)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~- 331 (446)
... . .+..++|+||| ++++++.+.
T Consensus 168 ----------------------------------------------------l~~-~-~~~~~~~spdg-~~~~~~~~~~ 192 (347)
T 2gop_A 168 ----------------------------------------------------FEK-P-RFSSGIWHRDK-IVVNVPHREI 192 (347)
T ss_dssp ----------------------------------------------------EEE-E-TTCEEEEETTE-EEEEEECCCS
T ss_pred ----------------------------------------------------ecC-C-CcccccCCCCe-EEEEEecccc
Confidence 011 1 46678899999 877776552
Q ss_pred ------cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-C--------CceEEEEeecCceEEEecccc
Q 013274 332 ------RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-M--------TAVKAFDIWSGKTCLTFRGHY 396 (446)
Q Consensus 332 ------~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~~~~~~d~~~~~~~~~l~gH~ 396 (446)
..+||.+.+++.. .+.. . .... ..+|++..++... . ..+.+|| +++....+.+|.
T Consensus 193 ~~~~~~~~~l~~~d~~~~~--~l~~---~--~~~~-~~spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~ 262 (347)
T 2gop_A 193 IPQYFKFWDIYIWEDGKEE--KMFE---K--VSFY-AVDSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVD 262 (347)
T ss_dssp SCCSSCCEEEEEEETTEEE--EEEE---E--ESEE-EEEECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCC
T ss_pred cccccccccEEEeCCCceE--Eecc---C--ccee-eECCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCC
Confidence 4456655443321 1111 1 1111 2277877655433 2 1345555 566555556778
Q ss_pred cceEE-EEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 397 EYVNC-CCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 397 ~~v~~-~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
..+.. ++|+ |+ ++++++.|+.++|| .+
T Consensus 263 ~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 263 RGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SEEEEEEEET-TE-EEEEEEETTEEEEE-EE
T ss_pred cccCCccEEc-Cc-EEEEEecCCcEEEE-Ec
Confidence 88886 9999 98 99999999999999 86
No 197
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.29 E-value=5.9e-10 Score=105.71 Aligned_cols=276 Identities=13% Similarity=0.126 Sum_probs=167.3
Q ss_pred cCCCCEEEEeeC----CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe-----
Q 013274 53 LTEERYLLSGAS----DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS----- 123 (446)
Q Consensus 53 ~~~~~~l~s~s~----Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s----- 123 (446)
|+..++.++-.. +++|.+.|..+.+... .+ . .|.. . .+.++| ++++++.+.
T Consensus 42 pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~---------~I-~------vG~~-P--~va~sp-DG~~lyVan~~~~r 101 (386)
T 3sjl_D 42 PDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG---------MI-D------GGFL-P--NPVVAD-DGSFIAHASTVFSR 101 (386)
T ss_dssp CCTTEEEEEECGGGCSSEEEEEEETTTTEEEE---------EE-E------ECSS-C--EEEECT-TSSCEEEEEEEEEE
T ss_pred CCCCEEEEEcCcccCCCCEEEEEECCCCeEEE---------EE-E------CCCC-C--cEEECC-CCCEEEEEcccccc
Confidence 433344444333 6899999987654210 00 0 1111 1 245565 777776654
Q ss_pred -----CCCeEEEEECCCCeeeEEEecCC--------ceEEeeeccCCCCceEEEEee--CCCcEEEEeCCCCceeeeeeC
Q 013274 124 -----YDHYVKVWDTNCTRVVMNFKMPG--------KVYRTAMSPLAASHMLIAAGT--EDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 124 -----~D~~i~iWd~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~lasgs--~d~~v~vwd~~~~~~~~~l~~ 188 (446)
.++.|.+||..+.+.+..+.... ....+.+++++ .++..+. .++.|.++|+.+++.+.++.-
T Consensus 102 ~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDG---k~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 102 IARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDG---KTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTS---SEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCC---CEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 46789999999999988876542 23456777754 2344443 368999999999999888854
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC-CceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 189 h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
.. . ...+ |.+...+++.+.||++.+.++.. ++..... ...+
T Consensus 179 ~g--~-~~~~-P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~---~~~~------------------------------- 220 (386)
T 3sjl_D 179 PD--C-YHIF-PTAPDTFFMHCRDGSLAKVAFGTEGTPEITH---TEVF------------------------------- 220 (386)
T ss_dssp CS--E-EEEE-EEETTEEEEEETTSCEEEEECCSSSCCEEEE---CCCC-------------------------------
T ss_pred CC--c-ceee-cCCCceeEEECCCCCEEEEECCCCCeEEEee---ccee-------------------------------
Confidence 22 1 2223 44433467888999999999865 3211000 0000
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCe-EEEEE-ccCCCEEEEeecCCcEEEEecCcCceee
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAV-TGLKV-TEDGMYLLSAGSDSRIRLWDVESGRNTL 345 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v-~~l~f-s~dg~~l~sgs~D~~i~lWd~~~~~~~~ 345 (446)
... ..++ ....| .++|+++. .+.+++|.+.|+.++....
T Consensus 221 ---------------------------~~~-----------~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v 261 (386)
T 3sjl_D 221 ---------------------------HPE-----------DEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKF 261 (386)
T ss_dssp ---------------------------SCT-----------TSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEE
T ss_pred ---------------------------ccc-----------cccccccceeEcCCCcEEE-EeCCCEEEEEECCCCccee
Confidence 000 0000 01134 37886555 4457899999997654322
Q ss_pred ee-ee---E----EEeecCCCeEEEEcCCCcEEEEeCC-----------CceEEEEeecCceEEEecccccceEEEEEcC
Q 013274 346 VN-FE---T----VRLQTSKPIQLATTQDPAVVFVPCM-----------TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS 406 (446)
Q Consensus 346 ~~-~~---~----~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp 406 (446)
.. +. . ..........++++++...+++... ..+-++|+.+++.+..+..-. .++.|+|||
T Consensus 262 ~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~ 340 (386)
T 3sjl_D 262 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQ 340 (386)
T ss_dssp CCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECS
T ss_pred ecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCC-CcceEEECC
Confidence 11 10 0 0111223345677888888887632 467888999999887765432 688999999
Q ss_pred CCC-EEEE-eeCCCcEEEeCCCCCC
Q 013274 407 QDQ-ELYT-GGNDRQILVWCPSRHI 429 (446)
Q Consensus 407 d~~-~lvt-gs~D~~v~vW~~~~~~ 429 (446)
|++ +|++ ...+++|-|+|..+.+
T Consensus 341 D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 341 DEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp SSSCEEEEEETTTTEEEEEETTTCC
T ss_pred CCCeEEEEEcCCCCeEEEEECCCCc
Confidence 997 6665 5568999999998665
No 198
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.27 E-value=4e-09 Score=97.82 Aligned_cols=237 Identities=11% Similarity=0.149 Sum_probs=145.7
Q ss_pred eEEEEeecCCcEEEE-------EeCCCeEEEEECCCCeeeEEEe-----cCCceEEeeeccCCCCceEEEEeeCCCcEEE
Q 013274 107 SSAIWYPVDTGLFVT-------GSYDHYVKVWDTNCTRVVMNFK-----MPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174 (446)
Q Consensus 107 ~~~~~~~~~~~~l~s-------~s~D~~i~iWd~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~lasgs~d~~v~v 174 (446)
.++++. .++.++++ +..++.|.+||..+++...... ....+..+.+.+.. ..++++.. ...|.+
T Consensus 21 ~~~~~~-~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~--g~l~v~~~-~~~l~~ 96 (314)
T 1pjx_A 21 EGPVFD-KNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDA--NQLFVADM-RLGLLV 96 (314)
T ss_dssp EEEEEC-TTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSS--SEEEEEET-TTEEEE
T ss_pred cCceEC-CCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCC--CcEEEEEC-CCCEEE
Confidence 355666 46777777 6778999999988776543221 11345566665531 34444443 447999
Q ss_pred EeCCCCceeee-eeC----CCCCeEEEEEecCCCeEEEEeeCC---------------CcEEEEEccCCceeEEeecccc
Q 013274 175 CDIASGAISQT-LSG----HRDGIMTVEWSTSSEWILVTGGCD---------------GAIRFWDIRRAGCFRVLDQSQS 234 (446)
Q Consensus 175 wd~~~~~~~~~-l~~----h~~~v~sv~~s~~~~~~l~S~s~D---------------g~I~iWd~~~~~~~~~~~~~~~ 234 (446)
||.+ ++.... ... +...+.+++++++++ ++++...+ +.|..||.. +... .
T Consensus 97 ~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~------ 166 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-Q------ 166 (314)
T ss_dssp EETT-SCEEECCSBCTTSCBCBCCCEEEECTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-E------
T ss_pred EeCC-CCEEEEEeccCCCccccCCcCEEECCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEE-E------
Confidence 9998 665433 221 123578999999886 45555444 233333322 1100 0
Q ss_pred cccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEE
Q 013274 235 QLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTG 314 (446)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 314 (446)
...+......
T Consensus 167 ----------------------------------------------------------------------~~~~~~~~~~ 176 (314)
T 1pjx_A 167 ----------------------------------------------------------------------VDTAFQFPNG 176 (314)
T ss_dssp ----------------------------------------------------------------------EEEEESSEEE
T ss_pred ----------------------------------------------------------------------eccCCCCcce
Confidence 0011223567
Q ss_pred EEEc----cCCCEE-EEeecCCcEEEEecC-cCceeee-eeeEEEeec-CCCeEEEEcCCCcEEEEe-CCCceEEEEeec
Q 013274 315 LKVT----EDGMYL-LSAGSDSRIRLWDVE-SGRNTLV-NFETVRLQT-SKPIQLATTQDPAVVFVP-CMTAVKAFDIWS 385 (446)
Q Consensus 315 l~fs----~dg~~l-~sgs~D~~i~lWd~~-~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~ 385 (446)
++++ |+|+.| ++...++.|.+||+. +++.... .+....... ..+..+++.+++.+.+.. ....+..|+..+
T Consensus 177 i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~ 256 (314)
T 1pjx_A 177 IAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG 256 (314)
T ss_dssp EEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC
T ss_pred EEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC
Confidence 8899 999654 555678899999986 3321110 111111011 234557778888776654 456789999877
Q ss_pred CceEEEecccccceEEEEEcCCCC-EEEEeeCCCcEEEeCCCC
Q 013274 386 GKTCLTFRGHYEYVNCCCFSSQDQ-ELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 386 ~~~~~~l~gH~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~~~~ 427 (446)
++....+..+...+.+++|+||++ ++++...++.|..|+++.
T Consensus 257 g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 257 GQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp BSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 877777888878899999999999 555666678899998864
No 199
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.25 E-value=2.3e-08 Score=91.78 Aligned_cols=276 Identities=8% Similarity=0.054 Sum_probs=174.3
Q ss_pred CccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 42 HKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 42 H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
......+|.+++ ++++.++...++.|.+||.+ +... . +. ...+...+.++.+.+ ++.++++
T Consensus 18 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~----------~-~~-----~~~~~~~~~~i~~~~-~g~l~v~ 78 (300)
T 2qc5_A 18 PDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIK----------E-FE-----VPTPDAKVMCLIVSS-LGDIWFT 78 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEE----------E-EE-----CSSTTCCEEEEEECT-TSCEEEE
T ss_pred CCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-CceE----------E-EE-----CCCCCCcceeEEECC-CCCEEEE
Confidence 345788999986 57778777788999999976 3210 0 00 011223455666654 6777777
Q ss_pred EeCCCeEEEEECCCCeeeEEEecC---CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee-eeeCCCCCeEEEE
Q 013274 122 GSYDHYVKVWDTNCTRVVMNFKMP---GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ-TLSGHRDGIMTVE 197 (446)
Q Consensus 122 ~s~D~~i~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~-~l~~h~~~v~sv~ 197 (446)
...++.|..+|.. ++. ..+..+ .....+++.+ +..++++...++.|..+|.+ ++... .+......+.+++
T Consensus 79 ~~~~~~v~~~d~~-g~~-~~~~~~~~~~~~~~i~~~~---~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~ 152 (300)
T 2qc5_A 79 ENGANKIGKLSKK-GGF-TEYPLPQPDSGPYGITEGL---NGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFIT 152 (300)
T ss_dssp ETTTTEEEEECTT-SCE-EEEECSSTTCCEEEEEECS---TTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEE
T ss_pred ecCCCeEEEECCC-CCe-EEecCCCCCCCCccceECC---CCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEE
Confidence 7668899999987 554 333332 3355566554 33466666667889999987 55432 2344456788999
Q ss_pred EecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCcee
Q 013274 198 WSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVR 277 (446)
Q Consensus 198 ~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (446)
+.++++ ++++...++.|..+|. ++.... +.
T Consensus 153 ~d~~g~-l~v~~~~~~~i~~~~~-~g~~~~-~~----------------------------------------------- 182 (300)
T 2qc5_A 153 LGSDNA-LWFTENQNNSIGRITN-TGKLEE-YP----------------------------------------------- 182 (300)
T ss_dssp ECTTSS-EEEEETTTTEEEEECT-TCCEEE-EE-----------------------------------------------
T ss_pred ECCCCC-EEEEecCCCeEEEECC-CCcEEE-ee-----------------------------------------------
Confidence 999887 5666666788998886 332110 10
Q ss_pred ecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCC
Q 013274 278 QSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSK 357 (446)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~ 357 (446)
...+...+..++++++|...++....+.|..||. +++..... .......
T Consensus 183 ---------------------------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~---~~~~~~~ 231 (300)
T 2qc5_A 183 ---------------------------LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYD---IPTPNAR 231 (300)
T ss_dssp ---------------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEE---CSSTTCC
T ss_pred ---------------------------CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEE---CCCCCCC
Confidence 0001123678899999988887777788999998 43321111 1111234
Q ss_pred CeEEEEcCCCcEEEEeC-CCceEEEEeecCceEE-EecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 358 PIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 358 ~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~-~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
+..++..+++.+.+... ...+..++. +++... .+..+...+.++++.++|++.++.. . .|..++|+
T Consensus 232 ~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 232 PHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred ceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 55677888877555543 357888887 454332 2444566789999999999877766 4 66666654
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.22 E-value=2.8e-08 Score=91.12 Aligned_cols=234 Identities=12% Similarity=0.064 Sum_probs=153.0
Q ss_pred ccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec---CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC
Q 013274 104 YAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM---PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180 (446)
Q Consensus 104 ~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~ 180 (446)
..+.++.+.+ ++.++++...++.|.+||.. +... .+.. ...+..+++.+. ..+.++...++.|..||.+ +
T Consensus 15 ~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~~-~~~~~~~~~~~~~i~~~~~---g~l~v~~~~~~~i~~~~~~-g 87 (299)
T 2z2n_A 15 TGPYGITVSD-KGKVWITQHKANMISCINLD-GKIT-EYPLPTPDAKVMCLTISSD---GEVWFTENAANKIGRITKK-G 87 (299)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCEE-EEECSSTTCCEEEEEECTT---SCEEEEETTTTEEEEECTT-S
T ss_pred CCccceEECC-CCCEEEEecCCCcEEEEcCC-CCeE-EecCCcccCceeeEEECCC---CCEEEeCCCCCeEEEECCC-C
Confidence 3456666654 67777776668999999988 5433 3332 234556666543 3456666667889999986 3
Q ss_pred ce-eeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 181 AI-SQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 181 ~~-~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
.. ...+..+...+.++++.+++. ++++...++.|..||. ++... .+.
T Consensus 88 ~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g~~~-~~~----------------------------- 135 (299)
T 2z2n_A 88 IIKEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITD-DGKIR-EYE----------------------------- 135 (299)
T ss_dssp CEEEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECT-TCCEE-EEE-----------------------------
T ss_pred cEEEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECC-CCCEE-Eec-----------------------------
Confidence 32 222333556789999998876 5667667788999987 33211 000
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecC
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 339 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~ 339 (446)
...+...+..++++++|..+++...++.|..||.
T Consensus 136 ---------------------------------------------~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~- 169 (299)
T 2z2n_A 136 ---------------------------------------------LPNKGSYPSFITLGSDNALWFTENQNNAIGRITE- 169 (299)
T ss_dssp ---------------------------------------------CSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-
T ss_pred ---------------------------------------------CCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-
Confidence 0001124788999999988887777889999998
Q ss_pred cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEE-EecccccceEEEEEcCCCCEEEEeeCC
Q 013274 340 SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGND 417 (446)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~-~l~gH~~~v~~~~fSpd~~~lvtgs~D 417 (446)
+++... + ........+..+++.+++.+.+... ...+..|+. +++... .+..+...+.+++++++|++.++...+
T Consensus 170 ~g~~~~--~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~ 245 (299)
T 2z2n_A 170 SGDITE--F-KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGA 245 (299)
T ss_dssp TCCEEE--E-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CCcEEE--e-eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCC
Confidence 554221 1 0111122345677778877655543 457888888 666433 244566789999999999988887778
Q ss_pred CcEEEeCCC
Q 013274 418 RQILVWCPS 426 (446)
Q Consensus 418 ~~v~vW~~~ 426 (446)
+.|.+|+++
T Consensus 246 ~~i~~~d~~ 254 (299)
T 2z2n_A 246 NKIGRLTSN 254 (299)
T ss_dssp TEEEEEETT
T ss_pred ceEEEECCC
Confidence 899999985
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=5.2e-10 Score=106.46 Aligned_cols=106 Identities=13% Similarity=0.081 Sum_probs=78.7
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCe-----------eeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEE
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR-----------VVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRL 174 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~v 174 (446)
+..+++++ ...++++|+.| .+++|++++.. ......+++ ++.++| +..+|+++ .++.|++
T Consensus 40 ~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f-----d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 40 LQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF-----HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE-----ETTEEEEE-ESSEEEE
T ss_pred ccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE-----CCCEEEEE-cCCcEEE
Confidence 55566665 56689999988 56779865322 224456677 888888 23466676 7899999
Q ss_pred EeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCC
Q 013274 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRA 223 (446)
Q Consensus 175 wd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~ 223 (446)
||+.+......+..|...+.++.+.+. . ++.++.||.+.+||+..+
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~ 156 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTK 156 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTC
T ss_pred EEchhhhccCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCC
Confidence 999887766677788888998887754 3 678899999999999754
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=2.9e-08 Score=91.65 Aligned_cols=224 Identities=13% Similarity=0.142 Sum_probs=140.2
Q ss_pred EEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee
Q 013274 108 SAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS 187 (446)
Q Consensus 108 ~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~ 187 (446)
+..|.+.++.++++...++.|..||..++.. ..+...+.+..+++.+.. .++++. +..|.+||.++++......
T Consensus 17 gp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG---~l~v~~--~~~l~~~d~~~g~~~~~~~ 90 (297)
T 3g4e_A 17 SPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSG---GYVATI--GTKFCALNWKEQSAVVLAT 90 (297)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTS---SEEEEE--TTEEEEEETTTTEEEEEEE
T ss_pred CCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEeCCCceEEEEECCCC---CEEEEE--CCeEEEEECCCCcEEEEEe
Confidence 3466665667778888889999999987765 445566677777777643 344443 5689999998886533222
Q ss_pred C----CCCCeEEEEEecCCCeEEEEeeCC---------CcEEEEEccCCceeEEeecccccccCCCcccccceeeccccc
Q 013274 188 G----HRDGIMTVEWSTSSEWILVTGGCD---------GAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254 (446)
Q Consensus 188 ~----h~~~v~sv~~s~~~~~~l~S~s~D---------g~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (446)
. ....+..+.++|+++. +++...+ ....+|.+.....+..
T Consensus 91 ~~~~~~~~~~~di~~d~dG~l-~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-------------------------- 143 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGRY-FAGTMAEETAPAVLERHQGALYSLFPDHHVKK-------------------------- 143 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSCE-EEEEEECCSBTTBCCTTCEEEEEECTTSCEEE--------------------------
T ss_pred cCCCCCCCCCCCEEECCCCCE-EEecCCcccccccccCCCcEEEEEECCCCEEE--------------------------
Confidence 1 1234678999998874 4443221 2234443321110000
Q ss_pred cCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCcE
Q 013274 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRI 333 (446)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i 333 (446)
...+....+.++|+|||+.| ++.+.+++|
T Consensus 144 --------------------------------------------------~~~~~~~pngi~~spdg~~lyv~~~~~~~i 173 (297)
T 3g4e_A 144 --------------------------------------------------YFDQVDISNGLDWSLDHKIFYYIDSLSYSV 173 (297)
T ss_dssp --------------------------------------------------EEEEESBEEEEEECTTSCEEEEEEGGGTEE
T ss_pred --------------------------------------------------EeeccccccceEEcCCCCEEEEecCCCCcE
Confidence 00112235789999999865 666778899
Q ss_pred EEEec--CcCceee-eeeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEc-CCC
Q 013274 334 RLWDV--ESGRNTL-VNFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFS-SQD 408 (446)
Q Consensus 334 ~lWd~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fS-pd~ 408 (446)
..||+ .++.... ..+.........+..++..+++.+.+.. ....+..||..+++.+..+..+...+++++|+ ||+
T Consensus 174 ~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 174 DAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 99987 3443211 0111111111234557778888665554 34568889988899999998888889999999 898
Q ss_pred CEEEEe
Q 013274 409 QELYTG 414 (446)
Q Consensus 409 ~~lvtg 414 (446)
+.|+-+
T Consensus 254 ~~L~vt 259 (297)
T 3g4e_A 254 SEMYVT 259 (297)
T ss_dssp CEEEEE
T ss_pred CEEEEE
Confidence 776533
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.20 E-value=3.7e-09 Score=101.96 Aligned_cols=274 Identities=12% Similarity=0.077 Sum_probs=169.3
Q ss_pred EEEEeeCC----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe----------
Q 013274 58 YLLSGASD----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS---------- 123 (446)
Q Consensus 58 ~l~s~s~D----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s---------- 123 (446)
..++...+ ++|.+.|+.+.+... .+.+ |.. . .+.++| |+++++.+.
T Consensus 87 vyV~n~~~~~~~~~VsVID~~t~~vv~----------~I~v------G~~-P--gia~Sp-Dgk~lyVan~~~~~~~~G~ 146 (426)
T 3c75_H 87 VYIQDPAHFAAITQQFVIDGSTGRILG----------MTDG------GFL-P--HPVAAE-DGSFFAQASTVFERIARGK 146 (426)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEE----------EEEE------CSS-C--EEEECT-TSSCEEEEEEEEEETTEEE
T ss_pred EEEECCCcCCCCCeEEEEECCCCEEEE----------EEEC------CCC-C--ceEECC-CCCEEEEEeccccccccCC
Confidence 44444444 799999998764210 0111 111 1 345665 777666664
Q ss_pred CCCeEEEEECCCCeeeEEEecC--------CceEEeeeccCCCCceEEEEee--CCCcEEEEeCCCCceeeeeeCCCCCe
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMP--------GKVYRTAMSPLAASHMLIAAGT--EDVQVRLCDIASGAISQTLSGHRDGI 193 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~lasgs--~d~~v~vwd~~~~~~~~~l~~h~~~v 193 (446)
.++.|.++|..+.+.+..+... ...+.+.++++. .++..+. .++.|.+.|+.+++.+.++.-.. .
T Consensus 147 ~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDG---k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g--~ 221 (426)
T 3c75_H 147 RTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDN---KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD--C 221 (426)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTS---SEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E
T ss_pred CCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCC---CEEEEEecCCCCeEEEEECCCCeEEEEEEcCC--c
Confidence 4679999999999998887764 123345666643 3444443 26789999999999888776321 1
Q ss_pred EEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCC
Q 013274 194 MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANG 273 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (446)
....|+++..+++.+.||++.+.++.+++...... ..
T Consensus 222 --~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~---~~-------------------------------------- 258 (426)
T 3c75_H 222 --YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT---EV-------------------------------------- 258 (426)
T ss_dssp --EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC---CC--------------------------------------
T ss_pred --eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee---ee--------------------------------------
Confidence 33445554556788889998888874433211100 00
Q ss_pred CceeecccceeecCCccccccCCCcccccccccccccC-eEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee-eeE-
Q 013274 274 NGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGA-VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN-FET- 350 (446)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~-v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~-~~~- 350 (446)
+... ..+ ...+.|++++..++-.+..++|.+.|+.+....... +..
T Consensus 259 --------------------~~v~-----------~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~ 307 (426)
T 3c75_H 259 --------------------FHTE-----------DELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEAL 307 (426)
T ss_dssp --------------------CSCT-----------TSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESS
T ss_pred --------------------eccC-----------CCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeec
Confidence 0000 000 011357788876655567788999998764322111 000
Q ss_pred ------EEeecCCCeEEEEcCCCcEEEEeC-----------CCceEEEEeecCceEEEecccccceEEEEEcCCCC-EEE
Q 013274 351 ------VRLQTSKPIQLATTQDPAVVFVPC-----------MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQ-ELY 412 (446)
Q Consensus 351 ------~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~-~lv 412 (446)
..........+++++++..+++.. .+.+.++|..+++.+.++..-. ..+.++|+||++ +|+
T Consensus 308 ~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~~~ly 386 (426)
T 3c75_H 308 TEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAEPLLY 386 (426)
T ss_dssp CTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSSCEEE
T ss_pred cccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCCEEEE
Confidence 000111222357888887777753 2468999999999988886443 479999999999 888
Q ss_pred Eee-CCCcEEEeCCCCCCCC
Q 013274 413 TGG-NDRQILVWCPSRHISD 431 (446)
Q Consensus 413 tgs-~D~~v~vW~~~~~~~~ 431 (446)
+.. .+++|.|+|+.+.+..
T Consensus 387 v~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 387 ALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEETTTTEEEEEETTTCCEE
T ss_pred EEcCCCCeEEEEECCCCCEE
Confidence 777 5999999999877644
No 204
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.19 E-value=3.7e-09 Score=99.86 Aligned_cols=273 Identities=11% Similarity=0.086 Sum_probs=161.6
Q ss_pred cceeEEEeecCCCCEEEEee--CCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEE
Q 013274 44 GSINSLQVDLTEERYLLSGA--SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVT 121 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s--~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s 121 (446)
.....|++++ +++++++.. .++.++||.+.++... .... . .....+|-..+..+.+.+ ++.++++
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~-------~~p~---~-~~~~~~~~~~p~gv~~d~-~g~L~v~ 83 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLI-------PFPP---Q-SGNAIITFDTVLGIKSDG-NGIVWML 83 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEE-------ESCC---C-CSSCCCCCSCEEEEEECS-SSEEEEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCee-------cCCC---c-ccCcccceeEeeEEEEcC-CCcEEEE
Confidence 5688999986 678888864 2444777876532210 0000 0 011124556777877765 5655554
Q ss_pred EeC-----CCeEEEEECCCCeeeEEEecCC-------ceEEeeeccCCCCceEEEEee---CCCcEEEEeCCCCceeeee
Q 013274 122 GSY-----DHYVKVWDTNCTRVVMNFKMPG-------KVYRTAMSPLAASHMLIAAGT---EDVQVRLCDIASGAISQTL 186 (446)
Q Consensus 122 ~s~-----D~~i~iWd~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~lasgs---~d~~v~vwd~~~~~~~~~l 186 (446)
-.. +..|.+||+.+++.+..+..+. ....+++.+. +..++++.+ .++.|.+||+.+++..+.+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~--~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLI--HNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETT--TTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecC--CCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 333 5799999999999877776532 2345566542 234555555 6789999999988877767
Q ss_pred eCCCCCeE-EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCC
Q 013274 187 SGHRDGIM-TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRA 265 (446)
Q Consensus 187 ~~h~~~v~-sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (446)
.+|..... ...+.+++. .+.+.+.|++++.|..
T Consensus 162 ~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~--------------------------------------------- 195 (343)
T 2qe8_A 162 QGYPGIAPEDIDLVIDGV-PVQIGQPDGTVIRPHL--------------------------------------------- 195 (343)
T ss_dssp TTCTTTSCCSCCCEETTE-ECBEECTTSCEECCCC---------------------------------------------
T ss_pred cCCCcccccccceeECCE-EEEeccCCCceeceec---------------------------------------------
Confidence 66533211 123333443 2344555555543320
Q ss_pred ccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC--ce
Q 013274 266 PQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG--RN 343 (446)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~--~~ 343 (446)
.+..|+|+|||++|..+..++. ++|.+... +.
T Consensus 196 ---------------------------------------------~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~ 229 (343)
T 2qe8_A 196 ---------------------------------------------GVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSN 229 (343)
T ss_dssp ---------------------------------------------CEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTC
T ss_pred ---------------------------------------------ccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcC
Confidence 1567899999998887776664 55554321 00
Q ss_pred ------e-eeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecc-cccceEEEEEcCCCCEEEEe
Q 013274 344 ------T-LVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRG-HYEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 344 ------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~g-H~~~v~~~~fSpd~~~lvtg 414 (446)
. ...+... .....+.-+++.+++.+.++.. ...+..|+..+++....... +...+++|+|.++++++++.
T Consensus 230 ~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~ 308 (343)
T 2qe8_A 230 LQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDC 308 (343)
T ss_dssp TTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEE
T ss_pred CCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEe
Confidence 0 0001111 1122445578888877666543 35788999755654333322 35678999999999999888
Q ss_pred eCCCcEEEeC
Q 013274 415 GNDRQILVWC 424 (446)
Q Consensus 415 s~D~~v~vW~ 424 (446)
+..+.+.+|.
T Consensus 309 ~~~~~~~~f~ 318 (343)
T 2qe8_A 309 NQLHHSAPLN 318 (343)
T ss_dssp CCGGGSGGGB
T ss_pred Cccccccccc
Confidence 7665554454
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=9.6e-09 Score=99.46 Aligned_cols=243 Identities=12% Similarity=0.093 Sum_probs=155.2
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCC--cEEEEeCCCCce
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDV--QVRLCDIASGAI 182 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~--~v~vwd~~~~~~ 182 (446)
....+++.+ ++.++++...++.|++||++++.+........... +++.+.. ..++++..++ .|.++|...+..
T Consensus 132 ~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g---~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 132 YMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDK---QRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTS---SEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCC---CcEEEEecCCCceEEEEEcCCCce
Confidence 455666664 77777887788999999999887765544333333 6666543 3455555544 799999877654
Q ss_pred eeee----eCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCC
Q 013274 183 SQTL----SGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQN 258 (446)
Q Consensus 183 ~~~l----~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (446)
...+ ..+...+.+++++|++..+++ +..++.|+.||..++.. ..+....
T Consensus 207 ~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~-~~~~~~~------------------------- 259 (409)
T 3hrp_A 207 PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV-TLIKQLE------------------------- 259 (409)
T ss_dssp EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE-EEEEECC-------------------------
T ss_pred eEEeeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE-EEEeccc-------------------------
Confidence 4444 224566788999995555555 66688999999875431 1110000
Q ss_pred CCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccc--cCeEEEEEcc-CCCEEEEeecCCcEEE
Q 013274 259 SSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY--GAVTGLKVTE-DGMYLLSAGSDSRIRL 335 (446)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~fs~-dg~~l~sgs~D~~i~l 335 (446)
. .++. .|...|+|+| ++.++++...+++|+.
T Consensus 260 ---------------------------~-------------------~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~ 293 (409)
T 3hrp_A 260 ---------------------------L-------------------SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYK 293 (409)
T ss_dssp ---------------------------C-------------------CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred ---------------------------c-------------------cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEE
Confidence 0 0000 1123789999 5777788888899999
Q ss_pred EecCcCceeeeeee------EE---EeecCCCeEEEEcCCCcEEEEeC-C-CceEEEEeecCceEEEeccc---------
Q 013274 336 WDVESGRNTLVNFE------TV---RLQTSKPIQLATTQDPAVVFVPC-M-TAVKAFDIWSGKTCLTFRGH--------- 395 (446)
Q Consensus 336 Wd~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~d~~~~~~~~~l~gH--------- 395 (446)
|+............ .. ......+..+++.+++.++++.. . ..++.|++.+++ +.++.++
T Consensus 294 ~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~~~g~~~~~g~~~g 372 (409)
T 3hrp_A 294 ITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VSTVAGQVDVASQIDG 372 (409)
T ss_dssp ECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEEEEECTTCBSCCCB
T ss_pred EecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEEEeCCCCCCCcCCC
Confidence 98764311111000 00 00023466788999988666654 3 578888876665 4556555
Q ss_pred ------ccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 396 ------YEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 396 ------~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
......++++|++.++++-..++.|+.+.++
T Consensus 373 ~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 373 TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEEC
T ss_pred ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEeC
Confidence 3568999999999999999999999887653
No 206
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.14 E-value=1.5e-08 Score=91.82 Aligned_cols=238 Identities=13% Similarity=0.047 Sum_probs=145.3
Q ss_pred ceeEEEeecCCCCEEE-EeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 45 SINSLQVDLTEERYLL-SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~-s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
...+|++++ ++++.+ +.+.++.|.+||..+.... .. ...+...+.++.+.+ ++.++++..
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~~-------------~~----~~~~~~~p~~i~~~~-~g~l~v~~~ 85 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGTT-------------VL----PFNGLYQPQGLAVDG-AGTVYVTDF 85 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC-----E-------------EC----CCCSCCSCCCEEECT-TCCEEEEET
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCcccc-------------eE----eeCCcCCcceeEECC-CCCEEEEcC
Confidence 567899986 567777 5578899999987543210 00 011222344556655 666666655
Q ss_pred CCCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~ 201 (446)
++.|.+||....... .+... .....+++.+. ..++++...++.|.+||..+.........+...+..++++++
T Consensus 86 -~~~i~~~d~~~~~~~-~~~~~~~~~p~~i~~~~~---g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~ 160 (270)
T 1rwi_B 86 -NNRVVTLAAGSNNQT-VLPFDGLNYPEGLAVDTQ---GAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNS 160 (270)
T ss_dssp -TTEEEEECTTCSCCE-ECCCCSCSSEEEEEECTT---CCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTT
T ss_pred -CCEEEEEeCCCceEe-eeecCCcCCCcceEECCC---CCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCC
Confidence 889999998765432 22222 34566666653 346666666788999986655433333333446788999998
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
++ ++++...++.|.+||.........
T Consensus 161 g~-l~v~~~~~~~i~~~~~~~~~~~~~----------------------------------------------------- 186 (270)
T 1rwi_B 161 GN-VYVTDTDNNRVVKLEAESNNQVVL----------------------------------------------------- 186 (270)
T ss_dssp CC-EEEEEGGGTEEEEECTTTCCEEEC-----------------------------------------------------
T ss_pred CC-EEEEECCCCEEEEEecCCCceEee-----------------------------------------------------
Confidence 87 567777778999998754321000
Q ss_pred ceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEE
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQL 361 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 361 (446)
...+...+.+|+++++|..+++...++.|.+||........ .. ......+..+
T Consensus 187 -----------------------~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~--~~--~~~~~~p~~i 239 (270)
T 1rwi_B 187 -----------------------PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV--LP--FTGLNTPLAV 239 (270)
T ss_dssp -----------------------CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE--CC--CCSCSCEEEE
T ss_pred -----------------------cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee--ec--cCCCCCceeE
Confidence 00011346789999999888888888999999987643211 10 0011345667
Q ss_pred EEcCCCcEEEEeC-CCceEEEEeecCc
Q 013274 362 ATTQDPAVVFVPC-MTAVKAFDIWSGK 387 (446)
Q Consensus 362 ~~~~~~~~~~~~~-~~~~~~~d~~~~~ 387 (446)
++.+++.++++.. ...++++++...+
T Consensus 240 ~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 240 AVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 8888887555543 3567777765443
No 207
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.12 E-value=2.9e-07 Score=86.09 Aligned_cols=150 Identities=9% Similarity=-0.009 Sum_probs=93.8
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
....+..|+++++.++++...++.|..||.+++... .+ .+...+.++.+.+ ++.++++.
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----------~~--------~~~~~v~~i~~~~-dg~l~v~~- 107 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-----------VH--------ALPFMGSALAKIS-DSKQLIAS- 107 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-----------EE--------ECSSCEEEEEEEE-TTEEEEEE-
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-----------EE--------ECCCcceEEEEeC-CCeEEEEE-
Confidence 345678899866778888888899999998754310 00 1123566777776 67666654
Q ss_pred CCCeEEEEECCCCeeeEEEecC-----CceEEeeeccCCCCceEEEEeeC------CCcEEEEeCCCCceeeeeeCCCCC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMP-----GKVYRTAMSPLAASHMLIAAGTE------DVQVRLCDIASGAISQTLSGHRDG 192 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~lasgs~------d~~v~vwd~~~~~~~~~l~~h~~~ 192 (446)
.+ .|.+||..+++........ ..++.+.+.+.. .++++... .+.|..+| +++.. .+..+...
T Consensus 108 ~~-gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G---~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~ 180 (326)
T 2ghs_A 108 DD-GLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG---ALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISI 180 (326)
T ss_dssp TT-EEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS---CEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESS
T ss_pred CC-CEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC---CEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcc
Confidence 44 5999999887754322221 134556666543 34443321 24555666 45432 33333445
Q ss_pred eEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
...++|+|+++.++++.+.++.|.+||+.
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBC
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcc
Confidence 67899999998766676777899999975
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.11 E-value=1.4e-08 Score=105.24 Aligned_cols=158 Identities=15% Similarity=0.175 Sum_probs=98.1
Q ss_pred CCccceeEEEeecCCCCEEE-----EeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLL-----SGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~-----s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
+|...+..++||| ++++|| +|+.+.+|++||+++++.... +..+.+ ...+.|+ |
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~----------------~~~~~k--~~~~~Ws--D 184 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET----------------PLKDVK--FSGISWL--G 184 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE----------------EEEEEE--SCCCEEE--T
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc----------------ccCCce--eccEEEe--C
Confidence 4666788999997 677777 344446799999988653110 000110 1234566 7
Q ss_pred CcEEEEEeCCC-------------eEEEEECCCCee--eEEEecCC----ceEEeeeccCCCCceEEEEee---CCCcEE
Q 013274 116 TGLFVTGSYDH-------------YVKVWDTNCTRV--VMNFKMPG----KVYRTAMSPLAASHMLIAAGT---EDVQVR 173 (446)
Q Consensus 116 ~~~l~s~s~D~-------------~i~iWd~~~~~~--~~~~~~~~----~~~~~~~~~~~~~~~~lasgs---~d~~v~ 173 (446)
++.|+.++.|. .|.+|++.+++. ...+.... ....+.++++.. .++++.+ .+..|+
T Consensus 185 g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~--~l~~~~~~~~~~~~i~ 262 (693)
T 3iuj_A 185 NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDR--FLLISAANSTSGNRLY 262 (693)
T ss_dssp TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSC--EEEEEEESSSSCCEEE
T ss_pred CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCC--EEEEEEccCCCCcEEE
Confidence 77888887774 499999987643 22233322 245666777542 3444433 235899
Q ss_pred EEeCCCCc-eeeeeeCCCCCeEEEEEecCCCeEEEEeeCC---CcEEEEEccC
Q 013274 174 LCDIASGA-ISQTLSGHRDGIMTVEWSTSSEWILVTGGCD---GAIRFWDIRR 222 (446)
Q Consensus 174 vwd~~~~~-~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D---g~I~iWd~~~ 222 (446)
++|++++. ....+..+.+..... ++++++.+++.+..| +.|..+|+.+
T Consensus 263 ~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~ 314 (693)
T 3iuj_A 263 VKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAAN 314 (693)
T ss_dssp EEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTS
T ss_pred EEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 99998874 456677777766665 566667666666554 5677777764
No 209
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.10 E-value=4e-09 Score=100.38 Aligned_cols=154 Identities=9% Similarity=0.063 Sum_probs=103.0
Q ss_pred ceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeC
Q 013274 45 SINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSY 124 (446)
Q Consensus 45 ~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~ 124 (446)
.++.|++++. ..++++|+.|+ +++|+++........... ...+.. ...+.. |+.+.| ++.+|+++ .
T Consensus 39 ~~nlLais~~-~gll~a~~~~~-l~v~~~~~l~~~~~~~~~-~~~~~~------~~~lp~-V~~l~f---d~~~L~v~-~ 104 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGSK-AVVGELQLLRDHITSDST-PLTFKW------EKEIPD-VIFVCF---HGDQVLVS-T 104 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETTE-EEEEEHHHHHHHHHSSSC-CCCCSE------EEECTT-EEEEEE---ETTEEEEE-E
T ss_pred cccEEEEcCC-CCEEEEeCCCE-EEEEEhhHhhhhhccccc-cccceE------EeeCCC-eeEEEE---CCCEEEEE-c
Confidence 6899999974 56788888885 666998654310000000 001111 123555 888888 67788888 8
Q ss_pred CCeEEEEECCCCeeeEEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCC
Q 013274 125 DHYVKVWDTNCTRVVMNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSE 203 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~ 203 (446)
++.|++||+.+....... .+...+..+.+. .+ -+++++.||.|.+||+.++.... +...|++++|+|+|
T Consensus 105 ~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~--~p---~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG- 174 (388)
T 1xip_A 105 RNALYSLDLEELSEFRTVTSFEKPVFQLKNV--NN---TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ- 174 (388)
T ss_dssp SSEEEEEESSSTTCEEEEEECSSCEEEEEEC--SS---EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-
T ss_pred CCcEEEEEchhhhccCccceeecceeeEEec--CC---CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-
Confidence 899999998765433222 223334443332 22 27888999999999999876543 45689999999987
Q ss_pred eEEEEeeCCCcEEEEEccCCc
Q 013274 204 WILVTGGCDGAIRFWDIRRAG 224 (446)
Q Consensus 204 ~~l~S~s~Dg~I~iWd~~~~~ 224 (446)
++.|..||+|++|+.....
T Consensus 175 --~~vg~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 175 --LAVLLKDRSFQSFAWRNGE 193 (388)
T ss_dssp --EEEEETTSCEEEEEEETTE
T ss_pred --eEEEEcCCcEEEEcCCCcc
Confidence 3678899999999887654
No 210
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.08 E-value=2e-07 Score=86.13 Aligned_cols=245 Identities=15% Similarity=0.119 Sum_probs=144.9
Q ss_pred cceeEEEeecCCCCEEEE-------eeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC-
Q 013274 44 GSINSLQVDLTEERYLLS-------GASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD- 115 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s-------~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~- 115 (446)
....+++|++ ++.++++ +..++.|.+||..++... .+ . .....++...+.++.+.+ +
T Consensus 18 ~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~----------~~--~-~~~~~~~~~~~~~i~~~~-~~ 82 (314)
T 1pjx_A 18 PGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT----------VI--C-KPEVNGYGGIPAGCQCDR-DA 82 (314)
T ss_dssp TTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEE----------EE--E-CCEETTEECCEEEEEECS-SS
T ss_pred CCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE----------EE--E-ecccCCCCCCCceEEEec-CC
Confidence 4567899985 6778888 678899999997655321 00 0 000123445577777765 5
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEE-EecC-----CceEEeeeccCCCCceEEEEeeCC---------------CcEEE
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMN-FKMP-----GKVYRTAMSPLAASHMLIAAGTED---------------VQVRL 174 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~lasgs~d---------------~~v~v 174 (446)
+.++++. .+..|.+||.+ ++.... .... ..+..+++.+. ..+.++...+ +.|..
T Consensus 83 g~l~v~~-~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~---g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~ 157 (314)
T 1pjx_A 83 NQLFVAD-MRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYE---GNLWITAPAGEVAPADYTRSMQEKFGSIYC 157 (314)
T ss_dssp SEEEEEE-TTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTT---SCEEEEECBCBCTTSCCCBTTSSSCEEEEE
T ss_pred CcEEEEE-CCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCC---CCEEEEecCcccccccccccccCCCCeEEE
Confidence 5545544 44589999998 665432 2111 12455666553 2345554433 46777
Q ss_pred EeCCCCceeeeeeCCCCCeEEEEEe----cCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeec
Q 013274 175 CDIASGAISQTLSGHRDGIMTVEWS----TSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSIS 250 (446)
Q Consensus 175 wd~~~~~~~~~l~~h~~~v~sv~~s----~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (446)
+|.+ ++... +..+......++|+ |+++.++++...++.|.+||+...+.+.....
T Consensus 158 ~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~------------------- 216 (314)
T 1pjx_A 158 FTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV------------------- 216 (314)
T ss_dssp ECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE-------------------
T ss_pred ECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE-------------------
Confidence 7765 54332 33344556889999 98876666767789999999752111100000
Q ss_pred cccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccc-cCeEEEEEccCCCEEEEeec
Q 013274 251 KSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHY-GAVTGLKVTEDGMYLLSAGS 329 (446)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~fs~dg~~l~sgs~ 329 (446)
. . ...++. +.+..++++++|.++++...
T Consensus 217 --~--------------------------------------~-----------~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 217 --W--------------------------------------G-----------HIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp --E--------------------------------------E-----------ECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred --E--------------------------------------E-----------ECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 0 0 000111 33677899999999888888
Q ss_pred CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCC--ceEEEEee
Q 013274 330 DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMT--AVKAFDIW 384 (446)
Q Consensus 330 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~ 384 (446)
++.|.+||..+++.. .........+..+++.+++..++++... .+..|++.
T Consensus 246 ~~~i~~~d~~~g~~~----~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~ 298 (314)
T 1pjx_A 246 SSHIEVFGPDGGQPK----MRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEECTTCBSCS----EEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECS
T ss_pred CCEEEEEcCCCCcEe----EEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCC
Confidence 899999998855421 1112222345667778888866665443 66666664
No 211
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=3e-07 Score=85.04 Aligned_cols=224 Identities=15% Similarity=0.168 Sum_probs=132.8
Q ss_pred EEEEeecCCc-EEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee
Q 013274 108 SAIWYPVDTG-LFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL 186 (446)
Q Consensus 108 ~~~~~~~~~~-~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l 186 (446)
...|.+ +++ ++++...++.|..|+.. +.........+....+++.+. ..++++...++.|.+||.+ ++. ..+
T Consensus 49 gp~~~~-~g~~l~~~d~~~~~i~~~~~~-g~~~~~~~~~~~~~gl~~d~d---G~l~v~~~~~~~v~~~~~~-g~~-~~~ 121 (305)
T 3dr2_A 49 GPAWWE-AQRTLVWSDLVGRRVLGWRED-GTVDVLLDATAFTNGNAVDAQ---QRLVHCEHGRRAITRSDAD-GQA-HLL 121 (305)
T ss_dssp EEEEEG-GGTEEEEEETTTTEEEEEETT-SCEEEEEESCSCEEEEEECTT---SCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred CCeEeC-CCCEEEEEECCCCEEEEEeCC-CCEEEEeCCCCccceeeECCC---CCEEEEECCCCEEEEECCC-CCE-EEE
Confidence 456766 555 77888888999999984 443222223344566666653 3466665556789999986 543 222
Q ss_pred eCC-----CCCeEEEEEecCCCeEEEE----eeC-------------CCcEEEEEccCCceeEEeecccccccCCCcccc
Q 013274 187 SGH-----RDGIMTVEWSTSSEWILVT----GGC-------------DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLK 244 (446)
Q Consensus 187 ~~h-----~~~v~sv~~s~~~~~~l~S----~s~-------------Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (446)
..+ ...+..++++|++. +++| |.. .+.|..||..++...
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~------------------ 182 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ------------------ 182 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE------------------
T ss_pred EeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE------------------
Confidence 211 12355678888776 3454 221 112222222111100
Q ss_pred cceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE
Q 013274 245 RKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL 324 (446)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l 324 (446)
... .......++|+|||+.|
T Consensus 183 -----------------------------------------------------------~~~-~~~~p~gl~~spdg~~l 202 (305)
T 3dr2_A 183 -----------------------------------------------------------RMA-DLDHPNGLAFSPDEQTL 202 (305)
T ss_dssp -----------------------------------------------------------EEE-EESSEEEEEECTTSSEE
T ss_pred -----------------------------------------------------------EEe-cCCCCcceEEcCCCCEE
Confidence 000 12235778999999977
Q ss_pred EEeecC------CcEEEEecCcCceeeeeeeEE-EeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEeccccc
Q 013274 325 LSAGSD------SRIRLWDVESGRNTLVNFETV-RLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYE 397 (446)
Q Consensus 325 ~sgs~D------~~i~lWd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~ 397 (446)
..+... +.|..|++..+. +...... ......+..++..+++. +++++...+.+|+. +++.+..+..+.
T Consensus 203 yv~~~~~~~~~~~~i~~~~~~~~~--l~~~~~~~~~~~~~pdgi~~d~~G~-lwv~~~~gv~~~~~-~g~~~~~~~~~~- 277 (305)
T 3dr2_A 203 YVSQTPEQGHGSVEITAFAWRDGA--LHDRRHFASVPDGLPDGFCVDRGGW-LWSSSGTGVCVFDS-DGQLLGHIPTPG- 277 (305)
T ss_dssp EEEECCC---CCCEEEEEEEETTE--EEEEEEEECCSSSCCCSEEECTTSC-EEECCSSEEEEECT-TSCEEEEEECSS-
T ss_pred EEEecCCcCCCCCEEEEEEecCCC--ccCCeEEEECCCCCCCeEEECCCCC-EEEecCCcEEEECC-CCCEEEEEECCC-
Confidence 666554 789999987542 1111111 11123344567777877 44555667888887 677777777666
Q ss_pred ceEEEEEcCCCCEEEEeeCCCcEEE
Q 013274 398 YVNCCCFSSQDQELYTGGNDRQILV 422 (446)
Q Consensus 398 ~v~~~~fSpd~~~lvtgs~D~~v~v 422 (446)
.+.+++|+||++.|..++.++..++
T Consensus 278 ~~~~~~f~~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGPCLWML 302 (305)
T ss_dssp CCCEEEECTTSCEEEEEETTEEEEE
T ss_pred ceeEEEEeCCCCEEEEEcCCeEEEE
Confidence 5899999999988887777765555
No 212
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.01 E-value=5.1e-07 Score=83.16 Aligned_cols=236 Identities=12% Similarity=0.088 Sum_probs=139.7
Q ss_pred EeCCCccceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 38 IVSPHKGSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 38 ~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
+...+...--+..|++.++.++++...++.|..||.+++... .+ .+...+.++.+.+ ++.
T Consensus 7 ~~~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----------~~--------~~~~~~~~i~~~~-dG~ 66 (297)
T 3g4e_A 7 VLPENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-----------RV--------TMDAPVSSVALRQ-SGG 66 (297)
T ss_dssp EECCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-----------EE--------ECSSCEEEEEEBT-TSS
T ss_pred EeccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-----------EE--------eCCCceEEEEECC-CCC
Confidence 334444455688898877788888888999999998764310 00 1223466667665 676
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEecC-----CceEEeeeccCCCCceEEEEe-eC--------CCcEEEEeCCCCcee
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMP-----GKVYRTAMSPLAASHMLIAAG-TE--------DVQVRLCDIASGAIS 183 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~lasg-s~--------d~~v~vwd~~~~~~~ 183 (446)
++++ . +..|.+||.++++........ ...+.+.+.+.. .++++. .. ...-.+|.++.....
T Consensus 67 l~v~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG---~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~ 141 (297)
T 3g4e_A 67 YVAT-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG---RYFAGTMAEETAPAVLERHQGALYSLFPDHHV 141 (297)
T ss_dssp EEEE-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS---CEEEEEEECCSBTTBCCTTCEEEEEECTTSCE
T ss_pred EEEE-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC---CEEEecCCcccccccccCCCcEEEEEECCCCE
Confidence 5554 3 568999999887754333221 124556665532 344433 21 123345544432222
Q ss_pred eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc--CCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 184 QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR--RAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 184 ~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
..+..+......++|+|+++.++++.+.++.|..||+. ++... ...
T Consensus 142 ~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~-~~~------------------------------- 189 (297)
T 3g4e_A 142 KKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS-NRR------------------------------- 189 (297)
T ss_dssp EEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE-EEE-------------------------------
T ss_pred EEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc-CcE-------------------------------
Confidence 23333445567899999998777787888999999873 22110 000
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~ 341 (446)
... ....+.+....|+++++|.+.++...++.|..||..++
T Consensus 190 ----------------------~~~-----------------~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG 230 (297)
T 3g4e_A 190 ----------------------SVY-----------------KLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTG 230 (297)
T ss_dssp ----------------------EEE-----------------ECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTC
T ss_pred ----------------------EEE-----------------ECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCc
Confidence 000 00011234678899999998888888889999999876
Q ss_pred ceeeeeeeEEEeecCCCeEEEEc-CCCcEEEEe
Q 013274 342 RNTLVNFETVRLQTSKPIQLATT-QDPAVVFVP 373 (446)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 373 (446)
+.. .........+..+++. ++...+++.
T Consensus 231 ~~~----~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 231 KRL----QTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp CEE----EEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred eEE----EEEECCCCCceEEEEeCCCCCEEEEE
Confidence 532 1122222345566776 666666554
No 213
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.01 E-value=3.5e-08 Score=103.20 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=95.2
Q ss_pred CCccceeEEEeecCCCCEEEEeeCC-----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecC
Q 013274 41 PHKGSINSLQVDLTEERYLLSGASD-----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~D-----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~ 115 (446)
+|+..+..++||| +|++|+.++.+ .+|++||+++++... . ..+...+..+.|+| |
T Consensus 160 ~~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~----------~--------~~~~~~~~~~~wsp-D 219 (741)
T 1yr2_A 160 DGATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLA----------D--------ELKWVKFSGLAWLG-N 219 (741)
T ss_dssp ---EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEE----------E--------EEEEEESCCCEEST-T
T ss_pred CCCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCC----------c--------cCCCceeccEEEEC-C
Confidence 3545788999997 67888877654 359999998765311 0 00111123456777 6
Q ss_pred CcEEEEEeCCCe--------------EEEEECCCCee--eEEEecCC---ceEEeeeccCCCCceEEEEeeC-----CCc
Q 013274 116 TGLFVTGSYDHY--------------VKVWDTNCTRV--VMNFKMPG---KVYRTAMSPLAASHMLIAAGTE-----DVQ 171 (446)
Q Consensus 116 ~~~l~s~s~D~~--------------i~iWd~~~~~~--~~~~~~~~---~~~~~~~~~~~~~~~~lasgs~-----d~~ 171 (446)
+.|+.++.|.. |.+|++.++.. ...+.... ......+++++ ..|+..+. +..
T Consensus 220 -~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG---~~l~~~~~~~~~~~~~ 295 (741)
T 1yr2_A 220 -DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG---RWVVITSSEGTDPVNT 295 (741)
T ss_dssp -SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS---CEEEEEEECTTCSCCE
T ss_pred -CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC---CEEEEEEEccCCCcce
Confidence 77777777654 89999977652 22233222 35567777653 34444433 348
Q ss_pred EEEEeCCCC--ceeeeeeCCCCCeEEEEEecCCCeEEEEeeC---CCcEEEEEccC
Q 013274 172 VRLCDIASG--AISQTLSGHRDGIMTVEWSTSSEWILVTGGC---DGAIRFWDIRR 222 (446)
Q Consensus 172 v~vwd~~~~--~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~---Dg~I~iWd~~~ 222 (446)
|++||++++ .....+..+...+.... +|+++.+++.+.. ++.|.+||+.+
T Consensus 296 l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~ 350 (741)
T 1yr2_A 296 VHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSG 350 (741)
T ss_dssp EEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSS
T ss_pred EEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCC
Confidence 999999887 32556666666665554 4788875544432 34588888765
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.01 E-value=6.3e-07 Score=82.00 Aligned_cols=234 Identities=12% Similarity=0.109 Sum_probs=150.6
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC---CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCc
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP---GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGA 181 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~ 181 (446)
.+.++.+.+ ++.++++...++.|.+||.. ++... +..+ ..+..+++.+ +..+.++...++.|..+|.+ ++
T Consensus 21 ~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~~~-~~~~~~~~~~~~i~~~~---~g~l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 21 GPYGITSSE-DGKVWFTQHKANKISSLDQS-GRIKE-FEVPTPDAKVMCLIVSS---LGDIWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CEEEEEECT-TSCEEEEETTTTEEEEECTT-SCEEE-EECSSTTCCEEEEEECT---TSCEEEEETTTTEEEEECTT-SC
T ss_pred CcceeeECC-CCCEEEEcCCCCeEEEECCC-CceEE-EECCCCCCcceeEEECC---CCCEEEEecCCCeEEEECCC-CC
Confidence 344555544 67777777778999999988 55432 3332 3355555554 23455665557889999988 55
Q ss_pred ee-eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCC
Q 013274 182 IS-QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSS 260 (446)
Q Consensus 182 ~~-~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (446)
.. ..+......+.++++.+++. ++++...++.|..||.. +... .+.
T Consensus 94 ~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~~-~~~------------------------------ 140 (300)
T 2qc5_A 94 FTEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTIY-EYD------------------------------ 140 (300)
T ss_dssp EEEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCEE-EEE------------------------------
T ss_pred eEEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCEE-Ecc------------------------------
Confidence 43 22333456789999998876 45666667888888865 3211 000
Q ss_pred cCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCc
Q 013274 261 VKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVES 340 (446)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~ 340 (446)
.......+.+++++++|+..++...++.|..||. +
T Consensus 141 --------------------------------------------~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 175 (300)
T 2qc5_A 141 --------------------------------------------LPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-T 175 (300)
T ss_dssp --------------------------------------------CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred --------------------------------------------CCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-C
Confidence 0001123678899999998777777888999998 4
Q ss_pred CceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEE-EecccccceEEEEEcCCCCEEEEeeCCC
Q 013274 341 GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCL-TFRGHYEYVNCCCFSSQDQELYTGGNDR 418 (446)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~-~l~gH~~~v~~~~fSpd~~~lvtgs~D~ 418 (446)
++... +. .......+..++..+++.+.+.... ..+..++. +++... .+..+...+.++++.++|++.++...++
T Consensus 176 g~~~~--~~-~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~ 251 (300)
T 2qc5_A 176 GKLEE--YP-LPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGAN 251 (300)
T ss_dssp CCEEE--EE-CSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTT
T ss_pred CcEEE--ee-CCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCC
Confidence 43211 11 1111223556777777766655543 46778877 555433 3445667789999999999888887789
Q ss_pred cEEEeCCCC
Q 013274 419 QILVWCPSR 427 (446)
Q Consensus 419 ~v~vW~~~~ 427 (446)
.|.+++++.
T Consensus 252 ~i~~~~~~g 260 (300)
T 2qc5_A 252 QIGRITNDN 260 (300)
T ss_dssp EEEEECTTS
T ss_pred eEEEECCCC
Confidence 999999853
No 215
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.96 E-value=5.7e-08 Score=92.06 Aligned_cols=282 Identities=8% Similarity=-0.045 Sum_probs=158.2
Q ss_pred EEEEEeCCC----eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEe---------eCCCcEEEEeCCCCceee
Q 013274 118 LFVTGSYDH----YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAG---------TEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 118 ~l~s~s~D~----~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg---------s~d~~v~vwd~~~~~~~~ 184 (446)
.+++-..++ +|-+.|.++++.+.++...... .+.++++.. .++++. ..++.|.+||+.+++.+.
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P-~i~~spDg~--~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~ 110 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS-LAVAGHSGS--DFALASTSFARSAKGKRTDYVEVFDPVTFLPIA 110 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC-EEEECTTSS--CEEEEEEEETTTTSSSEEEEEEEECTTTCCEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC-ceEECCCCC--EEEEEcccccccccCCCCCEEEEEECCCCCEEE
Confidence 444555555 8889999999999988865544 688888643 233332 136789999999999988
Q ss_pred eeeCC-------CCCeEEEEEecCCCeEEEEeeC-CCcEEE--EEccCCceeEEeecccccccCCCcccccceeeccccc
Q 013274 185 TLSGH-------RDGIMTVEWSTSSEWILVTGGC-DGAIRF--WDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLS 254 (446)
Q Consensus 185 ~l~~h-------~~~v~sv~~s~~~~~~l~S~s~-Dg~I~i--Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (446)
++.-+ ......++|+|++++++++... +..+.+ +|+.+ ++.+... .+... .. .
T Consensus 111 ~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-----~~~~~----~p-~---- 173 (368)
T 1mda_H 111 DIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-----SCFHI----HP-G---- 173 (368)
T ss_dssp EEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-----SCCCC----EE-E----
T ss_pred EEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-----CceEE----cc-C----
Confidence 88633 1234678999999986655433 467888 99876 3333210 00000 00 0
Q ss_pred cCCCCCcCCCCccccccCCCceeecccceeecCC--ccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCc
Q 013274 255 AGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKG--SVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSR 332 (446)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~ 332 (446)
..........++... .+.... ....+.... ... ....+ ..+. . ++++..++-.+. ++
T Consensus 174 -------g~~~~~~~~~dg~~~------~vd~~~~~~~~~~v~~~-~t~-~i~vg-~~P~---~-~~~~~~~~~vs~-~~ 232 (368)
T 1mda_H 174 -------AAATHYLGSCPASLA------ASDLAAAPAAAGIVGAQ-CTG-AQNCS-SQAA---Q-ANYPGMLVWAVA-SS 232 (368)
T ss_dssp -------ETTEEECCCCTTSCE------EEECCSSCCCCEECCCC-SCT-TSCBC-SCCE---E-ETTTTEEEECBS-SC
T ss_pred -------CCeEEEEEcCCCCEE------EEECccccccCCeEEEE-eee-eeeCC-CCcc---c-cccCCEEEEEcC-CE
Confidence 000000000000000 000000 000000000 000 00011 2233 3 555554444445 89
Q ss_pred EEEEecCcCceeeee-eeE-------EEeecCCCeEEEEcCCCcEEEEeC----------CCceEEEEeecCceEEEecc
Q 013274 333 IRLWDVESGRNTLVN-FET-------VRLQTSKPIQLATTQDPAVVFVPC----------MTAVKAFDIWSGKTCLTFRG 394 (446)
Q Consensus 333 i~lWd~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~d~~~~~~~~~l~g 394 (446)
|.+.|+.+....+.. +.. ..........+++++++..+++.. ...+.++|..+++.+.++..
T Consensus 233 V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~v 312 (368)
T 1mda_H 233 ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISN 312 (368)
T ss_dssp CEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEE
T ss_pred EEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEEC
Confidence 999998764322211 000 000111112267888988877642 23567999999998888876
Q ss_pred cccceEEEEEcCCCC-EEEEee-CCCcEEEeCCCCCC-CCCcCCCccCcc
Q 013274 395 HYEYVNCCCFSSQDQ-ELYTGG-NDRQILVWCPSRHI-SDGVDAGPMQDQ 441 (446)
Q Consensus 395 H~~~v~~~~fSpd~~-~lvtgs-~D~~v~vW~~~~~~-~~~~~~~~~~~~ 441 (446)
.. ..+.++|+||++ ++++.. .+++|.|+|+.+.+ ...+..|+..+.
T Consensus 313 g~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~ 361 (368)
T 1mda_H 313 GH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPES 361 (368)
T ss_dssp EE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCE
T ss_pred CC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCE
Confidence 65 589999999998 567777 69999999998765 445555665443
No 216
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.95 E-value=6.9e-07 Score=86.35 Aligned_cols=155 Identities=10% Similarity=-0.005 Sum_probs=98.2
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
.....|+|++ +++++++...++.|++||++++... .+ . .. +. ... +.+.+ +++.|+.+.
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~~----------~~--~-~~---~~--~~~-ia~~~-~g~~l~~~d 189 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKVT----------TV--H-PG---FK--GGK-PAVTK-DKQRVYSIG 189 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEEE----------EE--E-ET---CC--BCB-CEECT-TSSEEEEEB
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEEE----------Ee--e-cc---CC--CCc-eeEec-CCCcEEEEe
Confidence 3567899986 5778888888899999998764321 00 0 00 11 111 44554 677888888
Q ss_pred CCC--eEEEEECCCCeeeEEE----e-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee----eeCCCCC
Q 013274 124 YDH--YVKVWDTNCTRVVMNF----K-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT----LSGHRDG 192 (446)
Q Consensus 124 ~D~--~i~iWd~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~----l~~h~~~ 192 (446)
.++ .|.+|+...+.....+ . .......+++.+. +..+++ +..++.|+.||.+++..... ..++...
T Consensus 190 ~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~--~g~lyv-~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 190 WEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDET--EEWLYF-VDSNKNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp SSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTT--SSEEEE-ECTTCEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred cCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCC--CCeEEE-EECCCcEEEEECCCCCEEEEecccccCCCCC
Confidence 766 7888888765543333 1 1223455666653 233444 55678999999988764322 2233222
Q ss_pred e--EEEEEecCCCeEEEEeeCCCcEEEEEccC
Q 013274 193 I--MTVEWSTSSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 193 v--~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
- ..++|+|++..++++-..++.|+.||...
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred CccccEEEeCCCCEEEEEeCCCCEEEEEecCC
Confidence 2 28999996666778888889999998753
No 217
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.91 E-value=3.9e-07 Score=93.89 Aligned_cols=53 Identities=13% Similarity=0.213 Sum_probs=41.9
Q ss_pred CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 376 TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 376 ~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+..||+.+++.+-.+. +..+++...+++++.+++.++.|+.+++||..+++
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~ 509 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGE 509 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCc
Confidence 457889999998876665 33445666788888999999999999999998664
No 218
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.89 E-value=1.4e-06 Score=90.05 Aligned_cols=53 Identities=11% Similarity=0.140 Sum_probs=41.8
Q ss_pred CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 376 TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 376 ~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
..+..||+.+++.+-++..+.. +..-.++..+.+|+.|+.|+.++.||..+++
T Consensus 455 g~l~A~D~~tG~~~W~~~~~~~-~~~g~~~tagglvf~gt~dg~l~a~D~~tG~ 507 (689)
T 1yiq_A 455 GKLIAWDPVKQQAAWEVPYVTI-FNGGTLSTAGNLVFEGSADGRVIAYAADTGE 507 (689)
T ss_dssp EEEEEEETTTTEEEEEEEESSS-CCCCEEEETTTEEEEECTTSEEEEEETTTCC
T ss_pred eeEEEEECCCCCeEeEccCCCC-ccCccceECCCEEEEECCCCcEEEEECCCCc
Confidence 3478899999998777665543 3444677788899999999999999998764
No 219
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=5.2e-10 Score=106.89 Aligned_cols=144 Identities=15% Similarity=0.137 Sum_probs=72.9
Q ss_pred CCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCC
Q 013274 56 ERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNC 135 (446)
Q Consensus 56 ~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~ 135 (446)
+..+++++.|+.|..||.++++.. .... . ..+.+..+.. ++.++++++.|+.|..||.++
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~------------W~~~-----~--~~~~s~p~~~-~g~~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIK------------WTLK-----E--DPVLQVPTHV-EEPAFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEE------------EEEE-----C--CCSCCCC------CCEEECTTTCCEEEC----
T ss_pred CCEEEEEcCCCEEEEEECCCCCEE------------EEec-----C--CCceecceEc-CCCEEEEeCCCCEEEEEECCC
Confidence 467899999999999999887531 0000 0 1122222222 456788888999999999998
Q ss_pred CeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcE
Q 013274 136 TRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAI 215 (446)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I 215 (446)
++.+..+...... .+..++.......+++|+.|+.|+.||.++|+.++.+..+.. +.++|++.. +++++.|+.|
T Consensus 69 G~~~w~~~~~~~~-~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~-v~~~~~dg~v 142 (369)
T 2hz6_A 69 NEGLTKLPFTIPE-LVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSL-LYLGRTEYTI 142 (369)
T ss_dssp -CCSEECSCCHHH-HHTTCSCC-----CCCCEEEEEEEEECCC---------------------------EEEEEEEEEE
T ss_pred CceeeeeeccCcc-ccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCE-EEEEecCCEE
Confidence 8876655432110 011122211223567778899999999999998888776542 345666654 6788889999
Q ss_pred EEEEccCCce
Q 013274 216 RFWDIRRAGC 225 (446)
Q Consensus 216 ~iWd~~~~~~ 225 (446)
+.||.++++.
T Consensus 143 ~a~d~~tG~~ 152 (369)
T 2hz6_A 143 TMYDTKTREL 152 (369)
T ss_dssp ECCCSSSSSC
T ss_pred EEEECCCCCE
Confidence 9999987653
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.81 E-value=7.1e-09 Score=98.98 Aligned_cols=204 Identities=11% Similarity=0.038 Sum_probs=109.9
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCC-e
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG-I 193 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~-v 193 (446)
+++++++++.|+.|..||..+++.+..+.. +.+.+ .+...+..++++++.|+.|+.||.++|+.+..+..+... +
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s---~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~ 83 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQ---VPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELV 83 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-CCSCC---CC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-CCcee---cceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccc
Confidence 467899999999999999999999888776 43332 222233446777789999999999999877665443211 1
Q ss_pred E-EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccC
Q 013274 194 M-TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSAN 272 (446)
Q Consensus 194 ~-sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (446)
. +..+. .+. .+++++.|+.|+.||.++++.+-.+.
T Consensus 84 ~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~~w~~~------------------------------------------ 119 (369)
T 2hz6_A 84 QASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEKQQTLS------------------------------------------ 119 (369)
T ss_dssp TTCSCC-------CCCCEEEEEEEEECCC---------------------------------------------------
T ss_pred ccCceEe-cCC-EEEEEeCCCEEEEEECCCCcEEEEec------------------------------------------
Confidence 1 11111 223 35678889999999998765321110
Q ss_pred CCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE
Q 013274 273 GNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR 352 (446)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~ 352 (446)
.+. ...++|++..|++++.|+.|+.||..+++.... +....
T Consensus 120 ----------------------------------~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~-~~~~~ 160 (369)
T 2hz6_A 120 ----------------------------------SAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWN-ATYFD 160 (369)
T ss_dssp ---------------------------------------------------EEEEEEEEEEECCCSSSSSCCCE-EEEEE
T ss_pred ----------------------------------CCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEe-Eeccc
Confidence 000 112345778888899999999999998864221 11111
Q ss_pred eecCCCeEEEEcCC----CcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCE
Q 013274 353 LQTSKPIQLATTQD----PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQE 410 (446)
Q Consensus 353 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~ 410 (446)
. .. .+...+ +.+++......+..||..+++.+-++....-.+...++++|+..
T Consensus 161 ~--~~---~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 161 Y--AA---SLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp E--CC---BCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred c--cC---ccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 0 11 111221 33444344567889999888877665533333345566677653
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.77 E-value=6.3e-07 Score=92.86 Aligned_cols=118 Identities=8% Similarity=0.051 Sum_probs=76.4
Q ss_pred cCccccEeEEEEeecCCcEEE-----EEeCCCeEEEEECCCCeeeEEEecCCc-eEEeeeccCCCCceEEEEeeCC----
Q 013274 100 HGHKYAISSAIWYPVDTGLFV-----TGSYDHYVKVWDTNCTRVVMNFKMPGK-VYRTAMSPLAASHMLIAAGTED---- 169 (446)
Q Consensus 100 ~gh~~~V~~~~~~~~~~~~l~-----s~s~D~~i~iWd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~lasgs~d---- 169 (446)
.+|...+....++| |+++|| +|+++.+|++||+++++.+.. ...+. ...++|+ ++ ..|+.++.+
T Consensus 125 ~~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-~~~~~k~~~~~Ws-Dg---~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 125 PDGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET-PLKDVKFSGISWL-GN---EGFFYSSYDKPDG 198 (693)
T ss_dssp TTSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE-EEEEEESCCCEEE-TT---TEEEEEESSCCC-
T ss_pred CCCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc-ccCCceeccEEEe-CC---CEEEEEEecCccc
Confidence 34666777777776 888877 344457899999999886543 11111 1234555 33 345555555
Q ss_pred ---------CcEEEEeCCCCce----eeeeeC-CCCCeEEEEEecCCCeEEEEeeCC---CcEEEEEccCC
Q 013274 170 ---------VQVRLCDIASGAI----SQTLSG-HRDGIMTVEWSTSSEWILVTGGCD---GAIRFWDIRRA 223 (446)
Q Consensus 170 ---------~~v~vwd~~~~~~----~~~l~~-h~~~v~sv~~s~~~~~~l~S~s~D---g~I~iWd~~~~ 223 (446)
..|++|++.++.. +..... |.....++.|+|++++++++.+.+ +.|.++|+.++
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~ 269 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQE 269 (693)
T ss_dssp ------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTST
T ss_pred ccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCC
Confidence 3499999987642 333333 455678899999999877766533 57888988653
No 222
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.77 E-value=2.2e-07 Score=87.57 Aligned_cols=224 Identities=11% Similarity=0.070 Sum_probs=138.4
Q ss_pred cEeEEEEeecCCcEEEEEe--CCCeEEEEECCCCeeeEEEec--------CCceEEeeeccCCCCceEEEEeeC-----C
Q 013274 105 AISSAIWYPVDTGLFVTGS--YDHYVKVWDTNCTRVVMNFKM--------PGKVYRTAMSPLAASHMLIAAGTE-----D 169 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s--~D~~i~iWd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~lasgs~-----d 169 (446)
.+..+.+.+ ++.++++.. .++.++||.+.+++. ..+.. -..++.+++.+. ..++++-.. +
T Consensus 18 ~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~---g~L~v~D~g~~~~~~ 92 (343)
T 2qe8_A 18 APGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGN---GIVWMLDNGNQSKSV 92 (343)
T ss_dssp CEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSS---SEEEEEECHHHHTSC
T ss_pred CcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCC---CcEEEEcCCCCcCCC
Confidence 455666665 778888864 234366676655543 22221 123566676653 334444332 5
Q ss_pred CcEEEEeCCCCceeeeeeC------CCCCeEEEEEecCCCeEEEEee---CCCcEEEEEccCCceeEEeecccccccCCC
Q 013274 170 VQVRLCDIASGAISQTLSG------HRDGIMTVEWSTSSEWILVTGG---CDGAIRFWDIRRAGCFRVLDQSQSQLGRRP 240 (446)
Q Consensus 170 ~~v~vwd~~~~~~~~~l~~------h~~~v~sv~~s~~~~~~l~S~s---~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~ 240 (446)
..|.+||+++++.+..+.- +...+..+++++++..++++-. .++.|.+||+.+++..+.+..+...
T Consensus 93 ~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~----- 167 (343)
T 2qe8_A 93 PKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGI----- 167 (343)
T ss_dssp CEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTT-----
T ss_pred CeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcc-----
Confidence 7899999999987665542 2235688999986666667766 7889999998766543322100000
Q ss_pred cccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC
Q 013274 241 PLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED 320 (446)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d 320 (446)
.. .+ ..|.++
T Consensus 168 -----------------------------------------------------------------~~--~~---~~~~~~ 177 (343)
T 2qe8_A 168 -----------------------------------------------------------------AP--ED---IDLVID 177 (343)
T ss_dssp -----------------------------------------------------------------SC--CS---CCCEET
T ss_pred -----------------------------------------------------------------cc--cc---cceeEC
Confidence 00 00 123456
Q ss_pred CCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecC-----c-----eE-
Q 013274 321 GMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSG-----K-----TC- 389 (446)
Q Consensus 321 g~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~-----~-----~~- 389 (446)
|..+.+.+.|++++.|... +.-+++++++..+++.....-++|.+... . ..
T Consensus 178 g~~~~~~~~~g~~~~~~~~------------------~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 239 (343)
T 2qe8_A 178 GVPVQIGQPDGTVIRPHLG------------------VNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGS 239 (343)
T ss_dssp TEECBEECTTSCEECCCCC------------------EEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHT
T ss_pred CEEEEeccCCCceeceecc------------------cceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhc
Confidence 7777777788888777421 12357788887777665444466665421 1 00
Q ss_pred -EEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 390 -LTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 390 -~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
....++.+....++++++|+++++...++.|.+|++.
T Consensus 240 ~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 240 KIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp TCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred ceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 1233566677889999999999999999999999993
No 223
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.76 E-value=6.3e-05 Score=71.51 Aligned_cols=254 Identities=12% Similarity=0.029 Sum_probs=146.6
Q ss_pred eEEEeecCCCCEEEEee----------CCCcEEEEEcccCcCCCCCCccccccceEEe-ccccccCccccEeEEEEeecC
Q 013274 47 NSLQVDLTEERYLLSGA----------SDSSVAVYDVQRATDYEGGGHIAKHRSVFVV-DKQHEHGHKYAISSAIWYPVD 115 (446)
Q Consensus 47 ~~l~~s~~~~~~l~s~s----------~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~gh~~~V~~~~~~~~~ 115 (446)
..+.|+| ++++|..+. .+++|.+||..+.+... .+ .+. ......+ .....+.++| +
T Consensus 69 p~i~~sp-Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~---~i------~~~~~~~~~~g--~~p~~~~~sp-D 135 (373)
T 2mad_H 69 PNPVAAH-SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIA---DI------ELPDAPRFDVG--PYSWMNANTP-N 135 (373)
T ss_pred CCeEECC-CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEE---EE------ECCCccccccC--CCccceEECC-C
Confidence 4899997 566666664 36789999987643210 00 000 0000001 1122445665 8
Q ss_pred CcEEEEEeC--CCeEEEEECCCCeeeEE-EecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee-----
Q 013274 116 TGLFVTGSY--DHYVKVWDTNCTRVVMN-FKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS----- 187 (446)
Q Consensus 116 ~~~l~s~s~--D~~i~iWd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~----- 187 (446)
+++|+.+.. +.+|.++| ++++.+.. +..++. +.+.+.. ...+++.+.|+.+.++|. +++......
T Consensus 136 G~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~--~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~ 208 (373)
T 2mad_H 136 NADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGA--PSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML 208 (373)
T ss_pred CCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCC--CceEEEEcCCCCEEEEEC-CCcEEEEEeccccc
Confidence 888887764 58899999 99998887 766554 2333432 235566778999999999 876553221
Q ss_pred CCCCCe-EEEEEecCCCeEEEEeeCCCcEEEEEccCCcee--EEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 188 GHRDGI-MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCF--RVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 188 ~h~~~v-~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
....++ ....|.+++..+++.. .++.+.+.|+...... ..++...
T Consensus 209 ~~~~p~~~~~~~~~~~~~~~~~~-~~~~v~vid~~~~~~~v~~~~~~~~------------------------------- 256 (373)
T 2mad_H 209 TAAQNLLTQPAQANKSGRIVWPV-YSGKILQADISAAGATNKAPIDALS------------------------------- 256 (373)
T ss_pred cCCcceeecceeEecCCEEEEEc-CCceEEEEeccCCcceEeeeeeecC-------------------------------
Confidence 111221 2344566655433333 5678888887543210 0000000
Q ss_pred CccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeec----------CCcEE
Q 013274 265 APQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS----------DSRIR 334 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~----------D~~i~ 334 (446)
...... .-.......++|+||++.|..... ++.|.
T Consensus 257 ----------------------~~~~~~-------------~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~ 301 (373)
T 2mad_H 257 ----------------------GGRKAD-------------TWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVT 301 (373)
T ss_pred ----------------------Cccccc-------------ceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEE
Confidence 000000 000112345778999987665432 35799
Q ss_pred EEecCcCceeeeeeeEEEeecCCCeEEEEcCCCc-EEEEeC--CCceEEEEeecCceEEEe
Q 013274 335 LWDVESGRNTLVNFETVRLQTSKPIQLATTQDPA-VVFVPC--MTAVKAFDIWSGKTCLTF 392 (446)
Q Consensus 335 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~d~~~~~~~~~l 392 (446)
++|+.+.+.. ..+.. ...+..+++++|+. .+++.. .+.+.++|..+++...++
T Consensus 302 VID~~t~~vv----~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 302 SVTGLVGQTS----SQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred EEECCCCEEE----EEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 9999886531 12211 23577889999988 666654 468999999999987763
No 224
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.71 E-value=2.2e-05 Score=74.67 Aligned_cols=278 Identities=15% Similarity=0.118 Sum_probs=152.9
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCc--cccEeEEEEeecCCcEEEEEeCCCeEEEEECC
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGH--KYAISSAIWYPVDTGLFVTGSYDHYVKVWDTN 134 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh--~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~ 134 (446)
..|..++.++.|..+|.++++..= ...........+ ...+.+.... ++..++.++.|+.|..+|.+
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W----------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~~g~l~a~d~~ 121 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIW----------SVSLAEKDGWFSKEPALLSGGVTV--SGGHVYIGSEKAQVYALNTS 121 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEE----------EEECCC---CCSCCCCCEEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred CEEEEEcCCCeEEEEEccCCceee----------eecCccccccccccCcccccCceE--eCCEEEEEcCCCEEEEEECC
Confidence 457778889999999998765310 000000000000 1122222222 34577888899999999999
Q ss_pred CCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCe-----EEEEEecCCCeEEEEe
Q 013274 135 CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGI-----MTVEWSTSSEWILVTG 209 (446)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v-----~sv~~s~~~~~~l~S~ 209 (446)
+++.+..+...+.+.. .+...+ ..+..++.++.|..+|.++|+.+.......... .+.... + .. ++.+
T Consensus 122 tG~~~W~~~~~~~~~~---~p~~~~-~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~-~~-v~~g 194 (376)
T 3q7m_A 122 DGTVAWQTKVAGEALS---RPVVSD-GLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-F-GA-AVVG 194 (376)
T ss_dssp TCCEEEEEECSSCCCS---CCEEET-TEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-T-TE-EEEC
T ss_pred CCCEEEEEeCCCceEc---CCEEEC-CEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-C-CE-EEEE
Confidence 9998877766543321 111112 256677889999999999999887765432211 222222 3 33 5677
Q ss_pred eCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCc
Q 013274 210 GCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGS 289 (446)
Q Consensus 210 s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (446)
+.++.+..+|.++++..-........ +. ....
T Consensus 195 ~~~g~l~~~d~~tG~~~w~~~~~~~~-~~----------------------------------------~~~~------- 226 (376)
T 3q7m_A 195 GDNGRVSAVLMEQGQMIWQQRISQAT-GS----------------------------------------TEID------- 226 (376)
T ss_dssp CTTTEEEEEETTTCCEEEEEECCC--------------------------------------------------------
T ss_pred cCCCEEEEEECCCCcEEEEEecccCC-CC----------------------------------------cccc-------
Confidence 88999999999877653322110000 00 0000
Q ss_pred cccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcE
Q 013274 290 VRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAV 369 (446)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (446)
.+. .....++ + .+..+..++.++.+..+|..+++.... . .......+.. .+..+
T Consensus 227 ---~~~----------~~~~~p~----~--~~~~v~~~~~~g~l~~~d~~tG~~~w~-~-----~~~~~~~~~~-~~~~l 280 (376)
T 3q7m_A 227 ---RLS----------DVDTTPV----V--VNGVVFALAYNGNLTALDLRSGQIMWK-R-----ELGSVNDFIV-DGNRI 280 (376)
T ss_dssp ----------------CCCCCCE----E--ETTEEEEECTTSCEEEEETTTCCEEEE-E-----CCCCEEEEEE-ETTEE
T ss_pred ---ccc----------ccCCCcE----E--ECCEEEEEecCcEEEEEECCCCcEEee-c-----cCCCCCCceE-ECCEE
Confidence 000 0000111 1 134555667888999999988763211 0 0111111222 23333
Q ss_pred EEEeCCCceEEEEeecCceEEEecc-cccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 370 VFVPCMTAVKAFDIWSGKTCLTFRG-HYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 370 ~~~~~~~~~~~~d~~~~~~~~~l~g-H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
.+......+..+|..+++.+-.... ....+..... .+..|+.++.++.|.++++.++.
T Consensus 281 ~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 281 YLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCC
T ss_pred EEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCc
Confidence 3334446788899888887655542 2222233333 35678888899999999987664
No 225
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.70 E-value=8e-06 Score=76.21 Aligned_cols=94 Identities=11% Similarity=0.001 Sum_probs=61.3
Q ss_pred EEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 109 AIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 109 ~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
..|.+.++.++++...++.|..||.++++.. .+.....+..+.+.+. +.++++ +. ..|.+||.++++.......
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~~v~~i~~~~d---g~l~v~-~~-~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKT-VHALPFMGSALAKISD---SKQLIA-SD-DGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEECSSCEEEEEEEET---TEEEEE-ET-TEEEEEETTTCCEEEEECS
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEECCCcceEEEEeCC---CeEEEE-EC-CCEEEEECCCCcEEEEeeC
Confidence 4566645667777778899999999877643 3455566777777654 334444 33 3599999988875332211
Q ss_pred ---C-CCCeEEEEEecCCCeEEEEe
Q 013274 189 ---H-RDGIMTVEWSTSSEWILVTG 209 (446)
Q Consensus 189 ---h-~~~v~sv~~s~~~~~~l~S~ 209 (446)
. ...+..+.++|+++. +++.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l-~v~~ 151 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGAL-WIGT 151 (326)
T ss_dssp STTCTTEEEEEEEECTTSCE-EEEE
T ss_pred CCCCCCCCCCCEEECCCCCE-EEEe
Confidence 1 235788999999874 4544
No 226
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.69 E-value=1.3e-05 Score=76.78 Aligned_cols=221 Identities=15% Similarity=0.185 Sum_probs=134.0
Q ss_pred CcEEEEEeCCCeEEEEECCCC----eeeEEEe---c---CC--ceEEeeeccCCCCceEEEEeeCC------CcEEEEeC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCT----RVVMNFK---M---PG--KVYRTAMSPLAASHMLIAAGTED------VQVRLCDI 177 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~----~~~~~~~---~---~~--~~~~~~~~~~~~~~~~lasgs~d------~~v~vwd~ 177 (446)
..+++++-.+.+|.+.|+.+. +....+. + .+ ..+.+.+.+. . ++++...+ +.|.+.|.
T Consensus 96 ~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pd---G-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 96 RFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPD---A-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSS---C-EEEEEEEETTSCSCCEEEEECT
T ss_pred CEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCC---e-EEEEcCCCcCCCCCCeEEEEEC
Confidence 345667888899999999754 5555552 1 01 2233455554 2 34444333 68999999
Q ss_pred CCCceeeeeeCCCCC---eEEEEEecCCCeEEEEee-------------------CCCcEEEEEccCCceeEEeeccccc
Q 013274 178 ASGAISQTLSGHRDG---IMTVEWSTSSEWILVTGG-------------------CDGAIRFWDIRRAGCFRVLDQSQSQ 235 (446)
Q Consensus 178 ~~~~~~~~l~~h~~~---v~sv~~s~~~~~~l~S~s-------------------~Dg~I~iWd~~~~~~~~~~~~~~~~ 235 (446)
++++.+.+++...++ -..+.|+|+++. |+|.. .+.+|.+||+.+.+..+.++...
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~-mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~-- 248 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEV-LVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE-- 248 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTE-EEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT--
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCE-EEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC--
Confidence 999998888632222 224778999885 66764 36899999998765443332100
Q ss_pred ccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEE
Q 013274 236 LGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGL 315 (446)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 315 (446)
. ......|
T Consensus 249 -----------------------------------------------------------------------~-g~~P~~i 256 (462)
T 2ece_A 249 -----------------------------------------------------------------------E-NRMALEL 256 (462)
T ss_dssp -----------------------------------------------------------------------T-EEEEEEE
T ss_pred -----------------------------------------------------------------------C-CCcccee
Confidence 0 0112344
Q ss_pred EE--ccCCCEEEEee------cCCcEEEEecCcCceeeee---eeEEEee-------------cCCCeEEEEcCCCcEEE
Q 013274 316 KV--TEDGMYLLSAG------SDSRIRLWDVESGRNTLVN---FETVRLQ-------------TSKPIQLATTQDPAVVF 371 (446)
Q Consensus 316 ~f--s~dg~~l~sgs------~D~~i~lWd~~~~~~~~~~---~~~~~~~-------------~~~~~~~~~~~~~~~~~ 371 (446)
.| +|+|+++..+. .+++|.+|....++-.... +...... ...+..+.+++|+..++
T Consensus 257 ~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLY 336 (462)
T 2ece_A 257 RPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLY 336 (462)
T ss_dssp EECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEE
T ss_pred EeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEE
Confidence 45 99999876655 5668877665543211111 1111100 13456788999999998
Q ss_pred EeCC--CceEEEEeecC---ceEEEeccc-----------c---cceEEEEEcCCCCEEEEee
Q 013274 372 VPCM--TAVKAFDIWSG---KTCLTFRGH-----------Y---EYVNCCCFSSQDQELYTGG 415 (446)
Q Consensus 372 ~~~~--~~~~~~d~~~~---~~~~~l~gH-----------~---~~v~~~~fSpd~~~lvtgs 415 (446)
+++. +.+.++|+.+. ++...+... . +....+++||||++|+.+.
T Consensus 337 VSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 337 LSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8754 68999998633 333333321 0 1358899999999988776
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.69 E-value=1.1e-05 Score=83.03 Aligned_cols=92 Identities=12% Similarity=0.063 Sum_probs=57.0
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEecccc-cceEEEEEcCCC
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFRGHY-EYVNCCCFSSQD 408 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~gH~-~~v~~~~fSpd~ 408 (446)
+.|..||+.+++..-. ... ........+...+.+++.++ ...+++||..+++.+.++.... ....-+.|++||
T Consensus 457 g~l~A~D~~tG~~~W~----~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G 531 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWS----VEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEETTTTEEEEE----EEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETT
T ss_pred cEEEEEeCCCCcEEee----cCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCC
Confidence 7899999998864221 111 11111222334455666654 4689999999999998886443 334567788899
Q ss_pred CEEEEe-eC----------------CCcEEEeCCCC
Q 013274 409 QELYTG-GN----------------DRQILVWCPSR 427 (446)
Q Consensus 409 ~~lvtg-s~----------------D~~v~vW~~~~ 427 (446)
+.++.. +. .+.+.++.+..
T Consensus 532 ~~~v~~~~G~~~~~~~~~~~~~~~~~~~l~~f~l~~ 567 (677)
T 1kb0_A 532 RQYVSVAVGWGGVYGLAARATERQGPGTVYTFVVGG 567 (677)
T ss_dssp EEEEEEEECCCHHHHHHCCSCSCCCCCEEEEEEETC
T ss_pred EEEEEEeccCCccccccccccccCCCCeEEEEeccc
Confidence 765532 22 36788887763
No 228
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.63 E-value=9e-06 Score=76.99 Aligned_cols=114 Identities=11% Similarity=-0.041 Sum_probs=82.2
Q ss_pred ecCCcEEEEEeC-----CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEe---------eCCCcEEEEeCC
Q 013274 113 PVDTGLFVTGSY-----DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAG---------TEDVQVRLCDIA 178 (446)
Q Consensus 113 ~~~~~~l~s~s~-----D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasg---------s~d~~v~vwd~~ 178 (446)
++++..++.... +++|.+.|..+++.+..+....... +.++++.. .++++. ..++.|.+||..
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~-va~spDG~--~lyVan~~~~r~~~G~~~~~VsviD~~ 117 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPN-PVVADDGS--FIAHASTVFSRIARGERTDYVEVFDPV 117 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCE-EEECTTSS--CEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCc-EEECCCCC--EEEEEcccccccccCCCCCEEEEEECC
Confidence 346777766654 6899999999999998887644444 88888653 233332 135789999999
Q ss_pred CCceeeeeeCCC-------CCeEEEEEecCCCeEEEEee-CCCcEEEEEccCCceeEEe
Q 013274 179 SGAISQTLSGHR-------DGIMTVEWSTSSEWILVTGG-CDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 179 ~~~~~~~l~~h~-------~~v~sv~~s~~~~~~l~S~s-~Dg~I~iWd~~~~~~~~~~ 229 (446)
+++.+..+.-.. ..-..+.|+|++++++++.. .++.|.++|+.+.+.+..+
T Consensus 118 t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI 176 (386)
T 3sjl_D 118 TLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRML 176 (386)
T ss_dssp TCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEE
T ss_pred CCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEE
Confidence 999888775221 23467899999998766643 3789999999987765544
No 229
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.57 E-value=3.3e-05 Score=73.33 Aligned_cols=257 Identities=11% Similarity=0.069 Sum_probs=145.4
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCC
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT 136 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~ 136 (446)
..+..++.|+.|..+|.++++..- ...... ...... .. .+..++.++.|+.|..+|..++
T Consensus 104 ~~v~v~~~~g~l~a~d~~tG~~~W----------~~~~~~---~~~~~p----~~---~~~~v~v~~~~g~l~~~d~~tG 163 (376)
T 3q7m_A 104 GHVYIGSEKAQVYALNTSDGTVAW----------QTKVAG---EALSRP----VV---SDGLVLIHTSNGQLQALNEADG 163 (376)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEE----------EEECSS---CCCSCC----EE---ETTEEEEECTTSEEEEEETTTC
T ss_pred CEEEEEcCCCEEEEEECCCCCEEE----------EEeCCC---ceEcCC----EE---ECCEEEEEcCCCeEEEEECCCC
Confidence 457778899999999998765310 000000 000111 11 1347778889999999999999
Q ss_pred eeeEEEecCCceEEee--eccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCC--C--------e-EEEEEecCCC
Q 013274 137 RVVMNFKMPGKVYRTA--MSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRD--G--------I-MTVEWSTSSE 203 (446)
Q Consensus 137 ~~~~~~~~~~~~~~~~--~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~--~--------v-~sv~~s~~~~ 203 (446)
+.+..+.......... ..+... ...+..++.++.+..+|.++|+.......... . + ....+. + .
T Consensus 164 ~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~-~-~ 240 (376)
T 3q7m_A 164 AVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVV-N-G 240 (376)
T ss_dssp CEEEEEECCC-----CCCCCCEEE-TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEE-T-T
T ss_pred cEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEE-C-C
Confidence 9887776544332110 111111 23566778899999999999988776653211 0 1 111121 2 3
Q ss_pred eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccce
Q 013274 204 WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 283 (446)
Q Consensus 204 ~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (446)
. ++.++.++.+..+|.++++..-...
T Consensus 241 ~-v~~~~~~g~l~~~d~~tG~~~w~~~----------------------------------------------------- 266 (376)
T 3q7m_A 241 V-VFALAYNGNLTALDLRSGQIMWKRE----------------------------------------------------- 266 (376)
T ss_dssp E-EEEECTTSCEEEEETTTCCEEEEEC-----------------------------------------------------
T ss_pred E-EEEEecCcEEEEEECCCCcEEeecc-----------------------------------------------------
Confidence 3 4566778999999987764321110
Q ss_pred eecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEE
Q 013274 284 IPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLAT 363 (446)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (446)
.+....+.. ++..|..++.++.|..+|..+++.... ... ...........
T Consensus 267 -------------------------~~~~~~~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~-~~~--~~~~~~~~~~~ 316 (376)
T 3q7m_A 267 -------------------------LGSVNDFIV--DGNRIYLVDQNDRVMALTIDGGVTLWT-QSD--LLHRLLTSPVL 316 (376)
T ss_dssp -------------------------CCCEEEEEE--ETTEEEEEETTCCEEEEETTTCCEEEE-ECT--TTTSCCCCCEE
T ss_pred -------------------------CCCCCCceE--ECCEEEEEcCCCeEEEEECCCCcEEEe-ecc--cCCCcccCCEE
Confidence 000122222 345666677899999999998864211 100 00001111111
Q ss_pred cCCCcEEEEeCC-CceEEEEeecCceEEEecccccceE-EEEEcCCCCEEEEeeCCCcEEEeC
Q 013274 364 TQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYVN-CCCFSSQDQELYTGGNDRQILVWC 424 (446)
Q Consensus 364 ~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v~-~~~fSpd~~~lvtgs~D~~v~vW~ 424 (446)
.+..++++.. ..+.++|..+++.+..+......+. .... .+..|+.++.|+.|..|+
T Consensus 317 --~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 317 --YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp --ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred --ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 1344555544 5689999999998776665333332 2222 245677788899998885
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.54 E-value=4.4e-05 Score=78.75 Aligned_cols=79 Identities=14% Similarity=0.091 Sum_probs=50.2
Q ss_pred CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccc-eEEEEEcCC
Q 013274 330 DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEY-VNCCCFSSQ 407 (446)
Q Consensus 330 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~-v~~~~fSpd 407 (446)
+++|+.||+.+++..-. ..... ......+...+.++|.++. ..+++||..+|+.+-++....+. ..-+.|+.|
T Consensus 454 ~g~l~A~D~~tG~~~W~----~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWE----VPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp EEEEEEEETTTTEEEEE----EEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred ceeEEEEECCCCCeEeE----ccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 47899999999864221 11111 1111133334566777654 57999999999999887755433 356788899
Q ss_pred CCEEEE
Q 013274 408 DQELYT 413 (446)
Q Consensus 408 ~~~lvt 413 (446)
|+..+.
T Consensus 529 G~qyv~ 534 (689)
T 1yiq_A 529 GEQYVT 534 (689)
T ss_dssp TEEEEE
T ss_pred CEEEEE
Confidence 976553
No 231
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.52 E-value=5.2e-05 Score=77.94 Aligned_cols=71 Identities=13% Similarity=0.164 Sum_probs=47.3
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCCc--eEEeeeccCCCCceEEEEeeC------CCcEEEEeCCCCceeeeee
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGTE------DVQVRLCDIASGAISQTLS 187 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lasgs~------d~~v~vwd~~~~~~~~~l~ 187 (446)
+..++.++.|+.|..+|.++++.+..+..... ...+...|.-.+.. ++.+.. ++.|+.+|.++|+.+.++.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~~~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRVVKGK-VIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEEECCE-EEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 35778888999999999999999877765321 11122222212233 334432 5899999999999888764
No 232
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.51 E-value=1e-05 Score=74.67 Aligned_cols=164 Identities=15% Similarity=0.115 Sum_probs=104.7
Q ss_pred eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCc
Q 013274 182 ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSV 261 (446)
Q Consensus 182 ~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (446)
.+..+..+........|+|+++.++++...++.|..|+.. ++ +..+
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~-~~~~-------------------------------- 81 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GT-VDVL-------------------------------- 81 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SC-EEEE--------------------------------
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CC-EEEE--------------------------------
Confidence 3445555556677899999998777888888999999863 32 1111
Q ss_pred CCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcC
Q 013274 262 KPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~ 341 (446)
..+.+.+..++++++|+++++...++.|.+|+.. +
T Consensus 82 --------------------------------------------~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g 116 (305)
T 3dr2_A 82 --------------------------------------------LDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-G 116 (305)
T ss_dssp --------------------------------------------EESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred --------------------------------------------eCCCCccceeeECCCCCEEEEECCCCEEEEECCC-C
Confidence 0112347789999999977766667889999986 4
Q ss_pred ceeeeeeeEE-EeecCCCeEEEEcCCCcEEEEe----C--------------CCceEEEEeecCceEEEecccccceEEE
Q 013274 342 RNTLVNFETV-RLQTSKPIQLATTQDPAVVFVP----C--------------MTAVKAFDIWSGKTCLTFRGHYEYVNCC 402 (446)
Q Consensus 342 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~--------------~~~~~~~d~~~~~~~~~l~gH~~~v~~~ 402 (446)
+.... .... ......+..+++.+++.+.++. . ...+..++..+++..... +....+.+
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl 193 (305)
T 3dr2_A 117 QAHLL-VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGL 193 (305)
T ss_dssp CEEEE-ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEE
T ss_pred CEEEE-EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcce
Confidence 32211 1110 0112234567888888877752 1 123344444455544333 55667899
Q ss_pred EEcCCCCEEEEeeCC------CcEEEeCCCC
Q 013274 403 CFSSQDQELYTGGND------RQILVWCPSR 427 (446)
Q Consensus 403 ~fSpd~~~lvtgs~D------~~v~vW~~~~ 427 (446)
+|+||++.|+.+..+ +.|.+|+++.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~ 224 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRD 224 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEET
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecC
Confidence 999999987766555 6899988753
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.48 E-value=1.1e-05 Score=80.01 Aligned_cols=247 Identities=12% Similarity=0.075 Sum_probs=133.6
Q ss_pred CCcEE-EEEeCCCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEe-----------------eCCCcEEE
Q 013274 115 DTGLF-VTGSYDHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAG-----------------TEDVQVRL 174 (446)
Q Consensus 115 ~~~~l-~s~s~D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasg-----------------s~d~~v~v 174 (446)
|++++ ++...+..|.+-|+++.++...+..+ .....+++.....+..+++++ -.++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 34454 45556678999999999987755443 335555553211222333332 23457999
Q ss_pred EeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCC--------------CcEEEEEccCCceeEEeecccccccCCC
Q 013274 175 CDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCD--------------GAIRFWDIRRAGCFRVLDQSQSQLGRRP 240 (446)
Q Consensus 175 wd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D--------------g~I~iWd~~~~~~~~~~~~~~~~~~~~~ 240 (446)
.|.++.+...++.--. .-..++++|+++++++|+-.. ..|.+.|...... . ...|+..
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~--~-----v~~Gk~~ 251 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK--A-----IAAGDYQ 251 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH--H-----HHHTCSE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE--e-----ccCCCee
Confidence 9999998888776322 346677899999876555433 2244444332110 0 0000000
Q ss_pred cccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccC
Q 013274 241 PLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED 320 (446)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d 320 (446)
.+ +.+........ .+... . ....-.....++.|+||
T Consensus 252 ~i-------------------------------~~V~VID~~~~--~~~~~--------~---~~Ipvg~~PhGv~~sPD 287 (595)
T 1fwx_A 252 EL-------------------------------NGVKVVDGRKE--ASSLF--------T---RYIPIANNPHGCNMAPD 287 (595)
T ss_dssp EE-------------------------------TTEEEEECSGG--GCCSS--------E---EEEEEESSCCCEEECTT
T ss_pred EE-------------------------------CcEEEEeCccc--CCcee--------E---EEEecCCCceEEEEcCC
Confidence 00 00000000000 00000 0 00000112456899999
Q ss_pred CCEE-EEeecCCcEEEEecCcCcee----ee---eeeEEEeecCCCeEEEEcCCCcEEEEe--CCCceEEEEeec-----
Q 013274 321 GMYL-LSAGSDSRIRLWDVESGRNT----LV---NFETVRLQTSKPIQLATTQDPAVVFVP--CMTAVKAFDIWS----- 385 (446)
Q Consensus 321 g~~l-~sgs~D~~i~lWd~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~~----- 385 (446)
|+++ +++..+.+|.++|+.+.+.. +. ...........+..++|++++ .+++. ..+.+..|++.+
T Consensus 288 Gk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~ 366 (595)
T 1fwx_A 288 KKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAY 366 (595)
T ss_dssp SSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHH
T ss_pred CCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhh
Confidence 9975 56667899999999864210 00 000001112356778999999 65554 346788899977
Q ss_pred -----CceEEEecccccc-----eEEEEEcCCCCEEEEe
Q 013274 386 -----GKTCLTFRGHYEY-----VNCCCFSSQDQELYTG 414 (446)
Q Consensus 386 -----~~~~~~l~gH~~~-----v~~~~fSpd~~~lvtg 414 (446)
.+.+.++..|-.+ -..+.++|||++|++.
T Consensus 367 ~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~ 405 (595)
T 1fwx_A 367 AGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCL 405 (595)
T ss_dssp HTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEE
T ss_pred cccccceeEEEeecccccccceeccceEeCCCCCEEEEc
Confidence 4556666555433 2344679999999974
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.47 E-value=3.7e-05 Score=68.17 Aligned_cols=113 Identities=7% Similarity=0.156 Sum_probs=79.6
Q ss_pred EEeecCCcEEEEEeCCC--eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee
Q 013274 110 IWYPVDTGLFVTGSYDH--YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS 187 (446)
Q Consensus 110 ~~~~~~~~~l~s~s~D~--~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~ 187 (446)
..+. ++.++.+.+.++ .|++.|+++++.+....+....+...+... +..+......++.+.++|.++.+.+.+++
T Consensus 48 L~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~--g~~ly~ltw~~~~v~v~D~~t~~~~~ti~ 124 (262)
T 3nol_A 48 FFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDW--KDKIVGLTWKNGLGFVWNIRNLRQVRSFN 124 (262)
T ss_dssp EEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred EEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEe--CCEEEEEEeeCCEEEEEECccCcEEEEEE
Confidence 3444 567778888876 999999999999998887766544434433 23455556678999999999999998887
Q ss_pred CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 188 GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 188 ~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
-.. .-+.++ ++++.+++| ..++.|.++|..+.+..+.+
T Consensus 125 ~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I 162 (262)
T 3nol_A 125 YDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTI 162 (262)
T ss_dssp CSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEE
T ss_pred CCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEE
Confidence 432 224444 466665544 45788999998876655444
No 235
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.42 E-value=0.00018 Score=69.30 Aligned_cols=269 Identities=12% Similarity=0.086 Sum_probs=152.0
Q ss_pred EEEeecCCCCEEEEee----------CCCcEEEEEcccCcCCCCCCccccccceEEeccccc-cCccccEeEEEEeecCC
Q 013274 48 SLQVDLTEERYLLSGA----------SDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHE-HGHKYAISSAIWYPVDT 116 (446)
Q Consensus 48 ~l~~s~~~~~~l~s~s----------~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~gh~~~V~~~~~~~~~~ 116 (446)
.|.++|+ +++|..+. .+++|.++|..+.+... .+.+...... .+ .....+.++| |+
T Consensus 122 gia~SpD-gk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~---------~I~v~g~~r~~~g--~~P~~~~~sp-DG 188 (426)
T 3c75_H 122 HPVAAED-GSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIA---------DIELPDAPRFLVG--TYQWMNALTP-DN 188 (426)
T ss_dssp EEEECTT-SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEE---------EEEETTCCCCCBS--CCGGGSEECT-TS
T ss_pred ceEECCC-CCEEEEEeccccccccCCCCCEEEEEECCCCcEEE---------EEECCCccccccC--CCcceEEEcC-CC
Confidence 7999975 55454443 47789999998764211 1111000000 00 0011234444 88
Q ss_pred cEEEEEeC--CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeee----eeCCC
Q 013274 117 GLFVTGSY--DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQT----LSGHR 190 (446)
Q Consensus 117 ~~l~s~s~--D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~----l~~h~ 190 (446)
++++.+.. +++|.+.|+.+++.+.++...+. ....+.. ...+++.+.|+.+.+.++.+++.... +.-..
T Consensus 189 k~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g--~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 189 KNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPAS--PTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp SEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEE--TTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred CEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCC--CcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 88888764 58999999999999988887653 1222322 13456667789998889866655422 21111
Q ss_pred CCe-EEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccc
Q 013274 191 DGI-MTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKR 269 (446)
Q Consensus 191 ~~v-~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (446)
.++ ..+.|.++++.++++ +..+.+.+.|+...... .++... +
T Consensus 264 ~p~~~~~~~~~dg~~~~~~-s~~g~V~ViD~~~~~~~-v~~~~~--~--------------------------------- 306 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWP-TYTGKIFQADLTAEGAT-FRAPIE--A--------------------------------- 306 (426)
T ss_dssp SCBCSCCEECTTTCEEEEE-BTTSEEEEEEECSSCEE-ECCCEE--S---------------------------------
T ss_pred CceeeEeeecCCCCEEEEE-eCCCcEEEEeccCCceE-Eeeeee--e---------------------------------
Confidence 221 235678887765444 45788888887643210 100000 0
Q ss_pred ccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeec----------CCcEEEEecC
Q 013274 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGS----------DSRIRLWDVE 339 (446)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~----------D~~i~lWd~~ 339 (446)
.....+... -.......++|+|||++|..... +++|-++|+.
T Consensus 307 ---------------~~~~~i~~g-------------~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~ 358 (426)
T 3c75_H 307 ---------------LTEAERADD-------------WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAE 358 (426)
T ss_dssp ---------------SCTTTGGGT-------------EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETT
T ss_pred ---------------ccccccccc-------------cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECC
Confidence 000000000 00011123578999886554421 3579999999
Q ss_pred cCceeeeeeeEEEeecCCCeEEEEcCCCc-EEEEeC--CCceEEEEeecCceEEEe--cccccceEEEEEcCC
Q 013274 340 SGRNTLVNFETVRLQTSKPIQLATTQDPA-VVFVPC--MTAVKAFDIWSGKTCLTF--RGHYEYVNCCCFSSQ 407 (446)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~d~~~~~~~~~l--~gH~~~v~~~~fSpd 407 (446)
+.+... .+ .. ...+..+++++++. .+++.. .+.+.++|..+++.+.++ .|+.- .+.++||
T Consensus 359 T~kvv~-~I---~v-g~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P---~~i~~~~ 423 (426)
T 3c75_H 359 TGERIN-KI---EL-GHEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGP---QIITTHD 423 (426)
T ss_dssp TCCEEE-EE---EE-EEEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSC---CEEECCC
T ss_pred CCeEEE-EE---EC-CCCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCC---cEEEcCC
Confidence 875321 11 11 12466788999988 777765 478999999999998886 23322 2555665
No 236
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.37 E-value=0.00021 Score=66.12 Aligned_cols=218 Identities=13% Similarity=0.115 Sum_probs=127.0
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCCce-EEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
...+..++.++.|..+|.. ++....+...... ....... +. .+..++.++.|..+|.+ ++....+......+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~---~g-~l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~ 180 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSE---DG-TIYVGSNDNYLYAINPD-GTEKWRFKTNDAITS 180 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECT---TS-CEEEECTTSEEEEECTT-SCEEEEEECSSCCCS
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcC---CC-EEEEEcCCCEEEEECCC-CCEeEEEecCCCcee
Confidence 3467778888999999988 7666555543321 1111111 22 35556778899999998 777766665566677
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCC
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGN 274 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (446)
++.+.+++. +++ ++ +.+..+| .++..+..+.
T Consensus 181 ~~~~d~~g~-l~v-~t--~~l~~~d-~~g~~~~~~~-------------------------------------------- 211 (330)
T 3hxj_A 181 AASIGKDGT-IYF-GS--DKVYAIN-PDGTEKWNFY-------------------------------------------- 211 (330)
T ss_dssp CCEECTTCC-EEE-ES--SSEEEEC-TTSCEEEEEC--------------------------------------------
T ss_pred eeEEcCCCE-EEE-Ee--CEEEEEC-CCCcEEEEEc--------------------------------------------
Confidence 777766665 333 33 7788888 4443221110
Q ss_pred ceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee
Q 013274 275 GVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ 354 (446)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~ 354 (446)
.....+.++.+.++|...+ ++.++.|..+|.. ++. ...+ ...
T Consensus 212 --------------------------------~~~~~~~~~~~~~~g~l~v-~t~~~gl~~~~~~-g~~-~~~~---~~~ 253 (330)
T 3hxj_A 212 --------------------------------AGYWTVTRPAISEDGTIYV-TSLDGHLYAINPD-GTE-KWRF---KTG 253 (330)
T ss_dssp --------------------------------CSSCCCSCCEECTTSCEEE-EETTTEEEEECTT-SCE-EEEE---ECS
T ss_pred --------------------------------cCCcceeceEECCCCeEEE-EcCCCeEEEECCC-CCE-eEEe---eCC
Confidence 0001244556677776544 5667778888743 322 1111 111
Q ss_pred cCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 355 TSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
......+...+++.+.+......+..+|. +++....+......+.++.+.+++++.+ |+.+|.+.+...+..
T Consensus 254 ~~~~~~~~~~~~g~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l~~-gt~~G~~~~~~~~~~ 325 (330)
T 3hxj_A 254 KRIESSPVIGNTDTIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTIYF-GTRNGKFYALFNLEH 325 (330)
T ss_dssp SCCCSCCEECTTSCEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCEEE-ECTTSCEEEEEC---
T ss_pred CCccccceEcCCCeEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEEEE-EcCCCeEEEEecccc
Confidence 11112233344454444333347888885 6777666665666778888888887554 788999998866543
No 237
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.35 E-value=6.2e-05 Score=72.04 Aligned_cols=189 Identities=15% Similarity=0.164 Sum_probs=114.0
Q ss_pred CceEEEEeeCCCcEEEEeCCCC----ceeeeee------CC-CCCeEEEEEecCCCeEEEEeeCC------CcEEEEEcc
Q 013274 159 SHMLIAAGTEDVQVRLCDIASG----AISQTLS------GH-RDGIMTVEWSTSSEWILVTGGCD------GAIRFWDIR 221 (446)
Q Consensus 159 ~~~~lasgs~d~~v~vwd~~~~----~~~~~l~------~h-~~~v~sv~~s~~~~~~l~S~s~D------g~I~iWd~~ 221 (446)
...+++.+-.++.|+++|+.+. +..++++ .. ...-..+...|++ +++|+..+ |.|.+.|..
T Consensus 95 r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 95 RRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp SCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCSCCEEEEECTT
T ss_pred CCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCCCCeEEEEECC
Confidence 3467778888899999999755 4555552 11 1123456778887 56777666 788888887
Q ss_pred CCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccc
Q 013274 222 RAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSS 301 (446)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (446)
+.+.+..+.....
T Consensus 173 T~~v~~~~~~~~~------------------------------------------------------------------- 185 (462)
T 2ece_A 173 SFEPLGKWEIDRG------------------------------------------------------------------- 185 (462)
T ss_dssp TCCEEEECCSBCT-------------------------------------------------------------------
T ss_pred CCeEEEEEccCCC-------------------------------------------------------------------
Confidence 7655443321000
Q ss_pred cccccccccCeEEEEEccCCCEEEEee-------------------cCCcEEEEecCcCceeeeeeeEEEeec--CCCeE
Q 013274 302 QDRATAHYGAVTGLKVTEDGMYLLSAG-------------------SDSRIRLWDVESGRNTLVNFETVRLQT--SKPIQ 360 (446)
Q Consensus 302 ~~~~~~h~~~v~~l~fs~dg~~l~sgs-------------------~D~~i~lWd~~~~~~~~~~~~~~~~~~--~~~~~ 360 (446)
. .+.-..+-|+|+++.++|.. .+.+|.+||+.+++. . ..+.... ..+..
T Consensus 186 ----~--~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~-~---~tI~vg~~g~~P~~ 255 (462)
T 2ece_A 186 ----D--QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKR-I---HSLTLGEENRMALE 255 (462)
T ss_dssp ----T--CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEE-E---EEEESCTTEEEEEE
T ss_pred ----C--ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcE-e---eEEecCCCCCccce
Confidence 0 00012355789999888874 368999999997632 1 1222210 12333
Q ss_pred E--EEcCCCcEEEEeCC-------CceEEEEeecCce----EEEeccc----------------ccceEEEEEcCCCCEE
Q 013274 361 L--ATTQDPAVVFVPCM-------TAVKAFDIWSGKT----CLTFRGH----------------YEYVNCCCFSSQDQEL 411 (446)
Q Consensus 361 ~--~~~~~~~~~~~~~~-------~~~~~~d~~~~~~----~~~l~gH----------------~~~v~~~~fSpd~~~l 411 (446)
+ +++|++...++.+. +.+.+|....++. ...+... ...+..+.+||||++|
T Consensus 256 i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfL 335 (462)
T 2ece_A 256 LRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFL 335 (462)
T ss_dssp EEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEE
T ss_pred eEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEE
Confidence 3 44888888877653 3555544433321 1111111 2457899999999998
Q ss_pred EEeeC-CCcEEEeCCC
Q 013274 412 YTGGN-DRQILVWCPS 426 (446)
Q Consensus 412 vtgs~-D~~v~vW~~~ 426 (446)
+.+-+ .+.|.++++.
T Consensus 336 YVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 336 YLSLWGIGEVRQYDIS 351 (462)
T ss_dssp EEEETTTTEEEEEECS
T ss_pred EEEeCCCCEEEEEEec
Confidence 75444 7889999875
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.35 E-value=0.00026 Score=63.43 Aligned_cols=197 Identities=10% Similarity=0.008 Sum_probs=125.1
Q ss_pred eEEEEeecCCcEEEEEeC--CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 107 SSAIWYPVDTGLFVTGSY--DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 107 ~~~~~~~~~~~~l~s~s~--D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
..+.+.+ ++.++++.+. +++|++.|+.+++.+..+......+...+... +..+.++...++.+.++|.++.+.+.
T Consensus 24 ~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~ 100 (266)
T 2iwa_A 24 QGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIK 100 (266)
T ss_dssp EEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEE
T ss_pred ccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEE
Confidence 3455654 5655566553 68999999999999988876554333333332 23566666788999999999999888
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
++.-....-+. ++++++.+++|- .++.|.+.|..+.+..+.+.....
T Consensus 101 ~i~~g~~~g~g--lt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg~~------------------------------ 147 (266)
T 2iwa_A 101 NFTHQMKDGWG--LATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVKYN------------------------------ 147 (266)
T ss_dssp EEECCSSSCCE--EEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECEET------------------------------
T ss_pred EEECCCCCeEE--EEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEECCC------------------------------
Confidence 88632122233 455777766554 688999999887655444321000
Q ss_pred CccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCcee
Q 013274 265 APQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT 344 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~ 344 (446)
......++.+.|. +|...+....++.|.+.|+.+++..
T Consensus 148 -----------------------------------------~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~ 185 (266)
T 2iwa_A 148 -----------------------------------------GHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLL 185 (266)
T ss_dssp -----------------------------------------TEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEE
T ss_pred -----------------------------------------CcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEE
Confidence 0001125677777 7766666667889999999998642
Q ss_pred eeeeeEEEee-------------cCCCeEEEEcCCCcEEEEeCC--CceEEEEeec
Q 013274 345 LVNFETVRLQ-------------TSKPIQLATTQDPAVVFVPCM--TAVKAFDIWS 385 (446)
Q Consensus 345 ~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~ 385 (446)
. .+... ...+.-+++.+++..+++.+. ..+...++.+
T Consensus 186 ~----~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 186 G----WILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp E----EEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred E----EEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 1 11111 013456888998888887754 3555555543
No 239
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.34 E-value=0.00041 Score=62.10 Aligned_cols=205 Identities=10% Similarity=0.010 Sum_probs=124.5
Q ss_pred eeeEEEecCCc--eEEeeeccCCCCceEEEEee--CCCcEEEEeCCCCceeeeeeC-CCCCeEEEEEecCCCeEEEEeeC
Q 013274 137 RVVMNFKMPGK--VYRTAMSPLAASHMLIAAGT--EDVQVRLCDIASGAISQTLSG-HRDGIMTVEWSTSSEWILVTGGC 211 (446)
Q Consensus 137 ~~~~~~~~~~~--~~~~~~~~~~~~~~~lasgs--~d~~v~vwd~~~~~~~~~l~~-h~~~v~sv~~s~~~~~~l~S~s~ 211 (446)
+.+.++++... ...+.+.++ +.++++.+ .++.|.++|+++++....+.- .......+++. ++.+.++.-.
T Consensus 10 ~vv~~~p~~~~~f~~Gl~~~~d---g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 10 EVLNEFPHDPYAFTQGLVYAEN---DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEEECCTTCCEEEEEECST---TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETT
T ss_pred eEEEEEECCCCCCcccEEEeCC---CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEec
Confidence 34555655543 346666653 23444433 367999999999998877652 21222345554 4456666667
Q ss_pred CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccc
Q 013274 212 DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVR 291 (446)
Q Consensus 212 Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (446)
++.+.++|..+.+.+..+... .
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g-~--------------------------------------------------------- 106 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQ-M--------------------------------------------------------- 106 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECC-S---------------------------------------------------------
T ss_pred CCEEEEEECCCCcEEEEEECC-C---------------------------------------------------------
Confidence 899999999876655444210 0
Q ss_pred cccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE--eecCCCeEEEEcCCCcE
Q 013274 292 QRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR--LQTSKPIQLATTQDPAV 369 (446)
Q Consensus 292 ~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 369 (446)
+ .+ ..+++||+.|..+..+++|.++|..+.+... .+.... .....+..+.+. ++ .
T Consensus 107 ---------------~-~g----~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~-~I~Vg~~~~p~~~~nele~~-dg-~ 163 (266)
T 2iwa_A 107 ---------------K-DG----WGLATDGKILYGSDGTSILYEIDPHTFKLIK-KHNVKYNGHRVIRLNELEYI-NG-E 163 (266)
T ss_dssp ---------------S-SC----CEEEECSSSEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TT-E
T ss_pred ---------------C-Ce----EEEEECCCEEEEECCCCeEEEEECCCCcEEE-EEEECCCCcccccceeEEEE-CC-E
Confidence 0 01 1245677766555568899999998865321 111100 001112334444 44 4
Q ss_pred EEEeC--CCceEEEEeecCceEEEeccc-------------ccceEEEEEcCCCC-EEEEeeCCCcEEEeCCCC
Q 013274 370 VFVPC--MTAVKAFDIWSGKTCLTFRGH-------------YEYVNCCCFSSQDQ-ELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 370 ~~~~~--~~~~~~~d~~~~~~~~~l~gH-------------~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~~~~ 427 (446)
+++.. .+.+.++|..+++....+.-. ....+.++|+|+++ +++|+.....|.+-++..
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 45543 468899999999988776432 13568999999975 577888888888776643
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.29 E-value=0.00017 Score=64.05 Aligned_cols=170 Identities=10% Similarity=0.024 Sum_probs=104.5
Q ss_pred ceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEE--EEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeeccccccc
Q 013274 160 HMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMT--VEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLG 237 (446)
Q Consensus 160 ~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~s--v~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~ 237 (446)
..++.+.+.++.|+++|+++++.+..+. ...... +++ .++.+.+..-.++.+.+||..+.+.++.+...
T Consensus 65 ~~Ly~stG~~g~v~~iD~~Tgkv~~~~l--~~~~FgeGit~--~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~----- 135 (268)
T 3nok_A 65 GHFFESTGHQGTLRQLSLESAQPVWMER--LGNIFAEGLAS--DGERLYQLTWTEGLLFTWSGMPPQRERTTRYS----- 135 (268)
T ss_dssp TEEEEEETTTTEEEECCSSCSSCSEEEE--CTTCCEEEEEE--CSSCEEEEESSSCEEEEEETTTTEEEEEEECS-----
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEeEEC--CCCcceeEEEE--eCCEEEEEEccCCEEEEEECCcCcEEEEEeCC-----
Confidence 4677777888899999999998877762 233333 454 44455666667899999999887765554210
Q ss_pred CCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEE
Q 013274 238 RRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKV 317 (446)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~f 317 (446)
+ .+ . .+
T Consensus 136 ---------------------------------------------------------------------~-eG--w--GL 141 (268)
T 3nok_A 136 ---------------------------------------------------------------------G-EG--W--GL 141 (268)
T ss_dssp ---------------------------------------------------------------------S-CC--C--CE
T ss_pred ---------------------------------------------------------------------C-ce--e--EE
Confidence 0 01 1 12
Q ss_pred ccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE--eecCCCeEEEEcCCCcEEEEeC--CCceEEEEeecCceEEEec
Q 013274 318 TEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR--LQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWSGKTCLTFR 393 (446)
Q Consensus 318 s~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~l~ 393 (446)
.+||+.|+.+..+++|.++|..+.+... .+.... ........+.+. ++. +++.. .+.+.++|..+++.+..+.
T Consensus 142 t~Dg~~L~vSdGs~~l~~iDp~T~~v~~-~I~V~~~g~~v~~lNeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 142 CYWNGKLVRSDGGTMLTFHEPDGFALVG-AVQVKLRGQPVELINELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EEETTEEEEECSSSEEEEECTTTCCEEE-EEECEETTEECCCEEEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred ecCCCEEEEECCCCEEEEEcCCCCeEEE-EEEeCCCCcccccccccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 3567766666568899999998865321 111100 001111223333 443 44443 4678889999998876554
Q ss_pred cc-------------ccceEEEEEcCCC-CEEEEee
Q 013274 394 GH-------------YEYVNCCCFSSQD-QELYTGG 415 (446)
Q Consensus 394 gH-------------~~~v~~~~fSpd~-~~lvtgs 415 (446)
-. .+-.+.+|+.|++ ++++||.
T Consensus 219 l~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 219 ASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp CHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 22 1356899999975 5566773
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.27 E-value=2.6e-05 Score=72.37 Aligned_cols=261 Identities=10% Similarity=0.054 Sum_probs=142.2
Q ss_pred EEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCCe
Q 013274 48 SLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDHY 127 (446)
Q Consensus 48 ~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~~ 127 (446)
++.++. ++ .|..++.++.|..|| .++...- ....+...+.++... .++ .+..++.+
T Consensus 24 ~~~~d~-~g-~l~v~t~~~~l~~~d-~~g~~~~-----------------~~~~~~~~~~~~~~~-~~g-~l~v~t~~-- 79 (330)
T 3hxj_A 24 SPILAK-NG-TIYLGSSNKNLYAIN-TDGSVKW-----------------FFKSGEIIECRPSIG-KDG-TIYFGSDK-- 79 (330)
T ss_dssp CCEECT-TS-CEECSSTTTTTEEEC-TTSCEEE-----------------SSCGGGEEEECCEET-TTT-EECCSSCE--
T ss_pred CceEcc-CC-eEEEEcCCCEEEEEC-CCCcEEE-----------------EEecCCCcccceEEe-cCC-cEEEecCc--
Confidence 344432 34 477778899999999 6554210 000111122233332 244 45555555
Q ss_pred EEEEECCCCeeeEEEecCCceE-EeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEE
Q 013274 128 VKVWDTNCTRVVMNFKMPGKVY-RTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWIL 206 (446)
Q Consensus 128 i~iWd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l 206 (446)
|..+|. +++.+..+....... ...+. + ..+..++.++.+..+|.+ ++.......+...+.++...+++. +
T Consensus 80 l~~~d~-~g~~~~~~~~~~~~~~~~~~~----~-~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~--l 150 (330)
T 3hxj_A 80 VYAINP-DGTEKWRFDTKKAIVSDFTIF----E-DILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT--I 150 (330)
T ss_dssp EEEECC-CGGGGGGSCC-----CCEEEE----T-TEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC--E
T ss_pred EEEECC-CCcEEEEEECCCCcccCceEE----C-CEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE--E
Confidence 888886 555443333222211 11111 2 245667778899999998 777777666666667777776665 3
Q ss_pred EEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccceeec
Q 013274 207 VTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRIPA 286 (446)
Q Consensus 207 ~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (446)
+.++.++.|..+|.. +..+..+..
T Consensus 151 ~vgt~~~~l~~~d~~-g~~~~~~~~------------------------------------------------------- 174 (330)
T 3hxj_A 151 YVGSNDNYLYAINPD-GTEKWRFKT------------------------------------------------------- 174 (330)
T ss_dssp EEECTTSEEEEECTT-SCEEEEEEC-------------------------------------------------------
T ss_pred EEEcCCCEEEEECCC-CCEeEEEec-------------------------------------------------------
Confidence 457778899999876 433221110
Q ss_pred CCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCC
Q 013274 287 KGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD 366 (446)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 366 (446)
....+.++.+.++|...++. +.|..+| .+++.... ..........+...++
T Consensus 175 ---------------------~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~----~~~~~~~~~~~~~~~~ 225 (330)
T 3hxj_A 175 ---------------------NDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWN----FYAGYWTVTRPAISED 225 (330)
T ss_dssp ---------------------SSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEE----ECCSSCCCSCCEECTT
T ss_pred ---------------------CCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEE----EccCCcceeceEECCC
Confidence 00113334456677765543 7788998 55432111 1111122333445555
Q ss_pred CcEEEEeCCCceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 367 PAVVFVPCMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 367 ~~~~~~~~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
+.+.+......+..++ .+++....+......+..+.+.++++ |..++.++.|..++++..
T Consensus 226 g~l~v~t~~~gl~~~~-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~~g~ 285 (330)
T 3hxj_A 226 GTIYVTSLDGHLYAIN-PDGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINPDGT 285 (330)
T ss_dssp SCEEEEETTTEEEEEC-TTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECTTSC
T ss_pred CeEEEEcCCCeEEEEC-CCCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECCCCc
Confidence 5555544446666665 35666555555555555666766664 556777888888887533
No 242
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.26 E-value=0.00039 Score=61.09 Aligned_cols=109 Identities=11% Similarity=0.083 Sum_probs=78.6
Q ss_pred CCcEEEEEeCCC--eEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCC
Q 013274 115 DTGLFVTGSYDH--YVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDG 192 (446)
Q Consensus 115 ~~~~l~s~s~D~--~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~ 192 (446)
++.++.|.+.++ .|+..|+++++.+....++...+...+... +..+......++.+.++|.++.+.+.+++-.. .
T Consensus 30 ~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-~ 106 (243)
T 3mbr_X 30 RGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-E 106 (243)
T ss_dssp TTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-C
T ss_pred CCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-C
Confidence 366777878764 999999999999998888776544444443 23455666788999999999999998887433 2
Q ss_pred eEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
-+.++ ++++.+++| ..++.|.++|..+.+..+.+
T Consensus 107 Gwglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I 140 (243)
T 3mbr_X 107 GWALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSI 140 (243)
T ss_dssp CCEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEE
T ss_pred ceEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEE
Confidence 24555 456665555 45789999998876655544
No 243
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.26 E-value=0.0019 Score=57.90 Aligned_cols=219 Identities=11% Similarity=0.037 Sum_probs=128.1
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
+..+.+.+.++.++++-..++.|..++++........... .....+++.+. +..++++-...+.|.++|++......
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~--~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHL--GRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEec--CCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 4456666545556666667889999999765543322211 24556666553 23456666667889999987543322
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeC--CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcC
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGC--DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVK 262 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~--Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (446)
.+.........++++|++.+++++... .+.|..+++.... ...+.
T Consensus 116 ~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~-------------------------------- 162 (267)
T 1npe_A 116 LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILA-------------------------------- 162 (267)
T ss_dssp EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEE--------------------------------
T ss_pred EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEE--------------------------------
Confidence 222222456889999976666565433 3567666653210 00000
Q ss_pred CCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE-EEEeecCCcEEEEecCcC
Q 013274 263 PRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY-LLSAGSDSRIRLWDVESG 341 (446)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~-l~sgs~D~~i~lWd~~~~ 341 (446)
.........|++++++.+ +++....++|..+|+...
T Consensus 163 -------------------------------------------~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 163 -------------------------------------------QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp -------------------------------------------CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred -------------------------------------------ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 000123577899998654 466667789999998753
Q ss_pred ceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEeecCceEEEecccc-cceEEEEEcCCCC
Q 013274 342 RNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWSGKTCLTFRGHY-EYVNCCCFSSQDQ 409 (446)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~~~~l~gH~-~~v~~~~fSpd~~ 409 (446)
... ..+. ....+..++.. ...++++. ...+..+|..+++.+.++.... .....++++||+.
T Consensus 200 ~~~-~~~~----~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 200 GRR-KVLE----GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEE-EEEE----CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred ceE-EEec----CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 211 1111 12233444433 34455543 3578888888888888776443 3578899999875
No 244
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.23 E-value=4e-05 Score=72.45 Aligned_cols=287 Identities=9% Similarity=-0.038 Sum_probs=147.7
Q ss_pred CCEEEEeeCCC----cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe--------
Q 013274 56 ERYLLSGASDS----SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS-------- 123 (446)
Q Consensus 56 ~~~l~s~s~Dg----~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s-------- 123 (446)
.+..++...+. +|.+.|..+.+... .+. .|.. . .+.++| ++++++.+.
T Consensus 32 ~~~yV~~~~~~~~~d~vsvID~~t~~v~~----------~i~------vG~~-P--~i~~sp-Dg~~lyVan~~~~r~~~ 91 (368)
T 1mda_H 32 RRSHITLPAYFAGTTENWVSCAGCGVTLG----------HSL------GAFL-S--LAVAGH-SGSDFALASTSFARSAK 91 (368)
T ss_dssp TEEEEEECTTTCSSEEEEEEETTTTEEEE----------EEE------ECTT-C--EEEECT-TSSCEEEEEEEETTTTS
T ss_pred CeEEEECCccCCccceEEEEECCCCeEEE----------EEe------CCCC-C--ceEECC-CCCEEEEEccccccccc
Confidence 34555555555 78899988764311 011 1221 1 345555 777777665
Q ss_pred --CCCeEEEEECCCCeeeEEEecC--------CceEEeeeccCCCCceEEEEeeC--CCcEEE--EeCCCCceeeeeeCC
Q 013274 124 --YDHYVKVWDTNCTRVVMNFKMP--------GKVYRTAMSPLAASHMLIAAGTE--DVQVRL--CDIASGAISQTLSGH 189 (446)
Q Consensus 124 --~D~~i~iWd~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~lasgs~--d~~v~v--wd~~~~~~~~~l~~h 189 (446)
.+++|.+||+.+++.+.++..+ ...+.+.++++.. +++.+.. +..|.+ +|+.+ +.++.-.
T Consensus 92 G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk---~lyVan~~~~~~v~V~~iD~~t---v~~i~v~ 165 (368)
T 1mda_H 92 GKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSA---CLLFFLFGSSAAAGLSVPGASD---DQLTKSA 165 (368)
T ss_dssp SSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSS---CEEEEECSSSCEEEEEETTTEE---EEEEECS
T ss_pred CCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCC---EEEEEccCCCCeEEEEEEchhh---ceEEECC
Confidence 4789999999999999988765 1234567777542 3444432 457888 89877 4444321
Q ss_pred CCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC-----CceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 190 RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR-----AGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 190 ~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
+. +.+.|+++..+++.+.||.+.+.|+.+ ++.... ......++..+.
T Consensus 166 -~~---~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~-~t~~i~vg~~P~----------------------- 217 (368)
T 1mda_H 166 -SC---FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQ-CTGAQNCSSQAA----------------------- 217 (368)
T ss_dssp -SC---CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCC-SCTTSCBCSCCE-----------------------
T ss_pred -Cc---eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEE-eeeeeeCCCCcc-----------------------
Confidence 11 123455555567888899988888865 221100 000000111100
Q ss_pred CccccccCCCceeec---ccceeecCCccccccCCCcccccc-ccc-ccccCeEEEEEccCCCEEEEeec---------C
Q 013274 265 APQKRSANGNGVRQS---SVGRIPAKGSVRQRLHPGMLSSQD-RAT-AHYGAVTGLKVTEDGMYLLSAGS---------D 330 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~h~~~v~~l~fs~dg~~l~sgs~---------D 330 (446)
....+...... ....+...+..........+.... ... .+......++|+|||+++..+.. +
T Consensus 218 ----~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~ 293 (368)
T 1mda_H 218 ----QANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAA 293 (368)
T ss_dssp ----EETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCE
T ss_pred ----ccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccC
Confidence 00000000000 000000000000000000000000 000 00111222679999987765432 2
Q ss_pred CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEE-eC--CCceEEEEeecCceEEEecccccceEEEEEcC
Q 013274 331 SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFV-PC--MTAVKAFDIWSGKTCLTFRGHYEYVNCCCFSS 406 (446)
Q Consensus 331 ~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSp 406 (446)
+.+.++|+.+.+.. ..+.. ...+..+++++++..+++ .. .+.+.++|+.+++.+.++..... .+.++|.+
T Consensus 294 ~~~~ViD~~t~~vv-~~i~v----g~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTS-GPISN----GHDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEE-ECCEE----EEEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred CCEEEEECCCCeEE-EEEEC----CCCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 35669999987532 11111 114667889999874443 33 57899999999999999987764 36666654
No 245
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.17 E-value=0.00041 Score=61.52 Aligned_cols=108 Identities=6% Similarity=-0.054 Sum_probs=78.4
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeE
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIM 194 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~ 194 (446)
++.++.+.+.++.|++.|+++++.+... ++...+...+.... ..+......++.+.++|.++.+.+.+++-. ..-+
T Consensus 64 ~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g--~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~-~eGw 139 (268)
T 3nok_A 64 QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDG--ERLYQLTWTEGLLFTWSGMPPQRERTTRYS-GEGW 139 (268)
T ss_dssp TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECS--SCEEEEESSSCEEEEEETTTTEEEEEEECS-SCCC
T ss_pred CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeC--CEEEEEEccCCEEEEEECCcCcEEEEEeCC-Ccee
Confidence 5678889999999999999999998888 76655443333332 345556667899999999999999888743 2334
Q ss_pred EEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 195 TVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 195 sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
.++ ++++.+++| ..++.|.++|..+.+..+.+
T Consensus 140 GLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I 171 (268)
T 3nok_A 140 GLC--YWNGKLVRS-DGGTMLTFHEPDGFALVGAV 171 (268)
T ss_dssp CEE--EETTEEEEE-CSSSEEEEECTTTCCEEEEE
T ss_pred EEe--cCCCEEEEE-CCCCEEEEEcCCCCeEEEEE
Confidence 555 456665555 45889999998877655544
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.07 E-value=0.0056 Score=54.71 Aligned_cols=159 Identities=9% Similarity=0.031 Sum_probs=96.7
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
.....+++++.++.+.++-...+.|..++++.... .. ... ..-.....+++.+.++.++++-.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~-----------~~-~~~-----~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP-----------TT-IIR-----QDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC-----------EE-EEC-----TTCCCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc-----------EE-EEE-----CCCCCccEEEEEecCCeEEEEEC
Confidence 45678999976667777777788999999864321 00 010 01123445666654455666666
Q ss_pred CCCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeC--CCcEEEEeCCCCceeeee-eCCCCCeEEEEEe
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTE--DVQVRLCDIASGAISQTL-SGHRDGIMTVEWS 199 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~--d~~v~vwd~~~~~~~~~l-~~h~~~v~sv~~s 199 (446)
..+.|.+++++........... .....+++.+.. ..++++... .+.|..++++.... ..+ ...-.....++++
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~--g~lyv~~~~~~~~~I~~~~~dg~~~-~~~~~~~~~~P~gia~d 175 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVR--GNLYWTDWNRDNPKIETSHMDGTNR-RILAQDNLGLPNGLTFD 175 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTT--TEEEEEECCSSSCEEEEEETTSCCC-EEEECTTCSCEEEEEEE
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCC--CEEEEEECCCCCcEEEEEecCCCCc-EEEEECCCCCCcEEEEc
Confidence 6789999998754322222211 234566666532 334444433 46888888865432 222 2233456889999
Q ss_pred cCCCeEEEEeeCCCcEEEEEccC
Q 013274 200 TSSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 200 ~~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
++++.++++-...+.|..+|+..
T Consensus 176 ~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 176 AFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEETTE
T ss_pred CCCCEEEEEECCCCEEEEEecCC
Confidence 98777777777788999998753
No 247
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.06 E-value=0.0027 Score=63.77 Aligned_cols=73 Identities=11% Similarity=0.150 Sum_probs=48.5
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeC-----CCcEEEEeCCCCceeeeeeC
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTE-----DVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~-----d~~v~vwd~~~~~~~~~l~~ 188 (446)
+..++.++.|+.+..+|..+++.+..+...+.. ..+...|.-.+..+++.... ++.|+.+|.++|+.+.++..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 194 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFA 194 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEcc
Confidence 457788888999999999999998877654311 11222222123334333332 78999999999998877653
No 248
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.04 E-value=0.0024 Score=56.59 Aligned_cols=163 Identities=15% Similarity=0.144 Sum_probs=104.4
Q ss_pred CCcc--ceeEEEeecCCCCEEEEeeCCC--cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 41 PHKG--SINSLQVDLTEERYLLSGASDS--SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 41 ~H~~--~v~~l~~s~~~~~~l~s~s~Dg--~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
+|.. ....|.|+ ++.+.+|.+.+| +|+++|+++++... .+.+ ..+.. ..-....+.
T Consensus 38 phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~----------~~~l-----~~~~F---geGit~~g~ 97 (262)
T 3nol_A 38 PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQ----------QIEL-----GKRYF---GEGISDWKD 97 (262)
T ss_dssp ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEE----------EEEC-----CTTCC---EEEEEEETT
T ss_pred cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEE----------EEec-----CCccc---eeEEEEeCC
Confidence 6654 44788887 468888888887 89999998875321 0001 11111 111111234
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCC--C---C
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGH--R---D 191 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h--~---~ 191 (446)
.+++..-.++.+.++|.++.+.+.+++..+.- ..++++ +..++++ ..++.|.++|.++.+...++.-. . .
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG--~glt~d--g~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEG--WGLTHN--DQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSCC--CCEEEC--SSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCCc--eEEecC--CCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 44455556899999999999999998876532 233333 2334444 34678999999999887776532 1 2
Q ss_pred CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEee
Q 013274 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230 (446)
Q Consensus 192 ~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~ 230 (446)
.+..+.|. +++ +++..-.++.|.+-|.+++++...++
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEE
Confidence 34456776 554 55655567899999999988877764
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.03 E-value=0.0024 Score=63.32 Aligned_cols=102 Identities=12% Similarity=0.030 Sum_probs=68.2
Q ss_pred EccCCCEEEEeecCCcEEEEecCc--CceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC--CceEEEEeecCc-----
Q 013274 317 VTEDGMYLLSAGSDSRIRLWDVES--GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM--TAVKAFDIWSGK----- 387 (446)
Q Consensus 317 fs~dg~~l~sgs~D~~i~lWd~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~----- 387 (446)
+.++|+++.- +.|.+.|..+ ++.... .+. ....+..+.++||+..+++... +.+.++|+.+.+
T Consensus 244 ~v~~Gk~~~i----~~V~VID~~~~~~~~~~~---~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~ 315 (595)
T 1fwx_A 244 AIAAGDYQEL----NGVKVVDGRKEASSLFTR---YIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYE 315 (595)
T ss_dssp HHHHTCSEEE----TTEEEEECSGGGCCSSEE---EEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHS
T ss_pred eccCCCeeEE----CcEEEEeCcccCCceeEE---EEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccc
Confidence 3456765443 4599999987 322011 111 1235667889999999888754 578999987542
Q ss_pred -------eEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 388 -------TCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 388 -------~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
...++.-- .....++|+|||...++.-.|++|.+|+.+.
T Consensus 316 ~l~~~~~v~~~v~vG-~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 316 NADPRSAVVAEPELG-LGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp CCCGGGGEEECCBCC-SCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred ccCcccceEEEcCCC-CCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 22333322 3468899999995556788899999999865
No 250
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.95 E-value=0.0067 Score=55.55 Aligned_cols=152 Identities=8% Similarity=-0.009 Sum_probs=86.1
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
.....+++++ +++++++-..++.|..||.+.... ..+. . ...+..+.+.+ ++.++++..
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~-----------~~~~-----~---~~~p~gia~~~-dG~l~vad~ 90 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ-----------IHAT-----V---EGKVSGLAFTS-NGDLVATGW 90 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE-----------EEEE-----C---SSEEEEEEECT-TSCEEEEEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE-----------EEEe-----C---CCCceeEEEcC-CCcEEEEec
Confidence 4567899987 577888877889999998653210 0000 0 12344555554 666655544
Q ss_pred CCC--eEEEEECCCCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCce-eeee---------eCC
Q 013274 124 YDH--YVKVWDTNCTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAI-SQTL---------SGH 189 (446)
Q Consensus 124 ~D~--~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~-~~~l---------~~h 189 (446)
... .|..+|..+++......... ....++.. .+..++++-..++.|+++|..++.. +... .+.
T Consensus 91 ~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~---~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 91 NADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPL---SDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESV 167 (306)
T ss_dssp CTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEES---SSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCC
T ss_pred cCCcceEEEEcCCCCeEEEEEeCCCccccCccccc---CCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCC
Confidence 322 46667777776544333221 11222221 2334555555678899999876531 1100 011
Q ss_pred CCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 190 RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 190 ~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
-.....+ +|++++++++-...+.|..+|+.
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~ 197 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVD 197 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBC
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeC
Confidence 1223445 77777777777778889999875
No 251
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.95 E-value=0.0088 Score=60.07 Aligned_cols=58 Identities=9% Similarity=0.072 Sum_probs=39.5
Q ss_pred cEEEEeCCCCceeeeeeC--CC--------CCeEEEEEecCCC--eEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 171 QVRLCDIASGAISQTLSG--HR--------DGIMTVEWSTSSE--WILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 171 ~v~vwd~~~~~~~~~l~~--h~--------~~v~sv~~s~~~~--~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
.|..+|.++|+.+..++. |. .++. +...++++ .+++.++.+|.+...|..+++.+-.+
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~ 342 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE 342 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee
Confidence 599999999998877753 21 2222 22223554 35677888999999999988765443
No 252
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.88 E-value=0.00092 Score=68.55 Aligned_cols=81 Identities=12% Similarity=0.217 Sum_probs=48.7
Q ss_pred CCccceeEEEeecCCCCEEEEeeC-CCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEE
Q 013274 41 PHKGSINSLQVDLTEERYLLSGAS-DSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLF 119 (446)
Q Consensus 41 ~H~~~v~~l~~s~~~~~~l~s~s~-Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l 119 (446)
++.....++++.. ++++++.|+. +.++.+||..+.+..... .+ ......|. +...+ +++++
T Consensus 240 ~~~~~~~~~~~~~-~g~lyv~GG~~~~~v~~yd~~t~~W~~~~-~~----------~~~R~~~s-----~~~~~-dg~iy 301 (656)
T 1k3i_A 240 KHDMFCPGISMDG-NGQIVVTGGNDAKKTSLYDSSSDSWIPGP-DM----------QVARGYQS-----SATMS-DGRVF 301 (656)
T ss_dssp SCCCSSCEEEECT-TSCEEEECSSSTTCEEEEEGGGTEEEECC-CC----------SSCCSSCE-----EEECT-TSCEE
T ss_pred CCCCccccccCCC-CCCEEEeCCCCCCceEEecCcCCceeECC-CC----------Cccccccc-----eEEec-CCeEE
Confidence 3444444566654 6789999984 568999998765432110 00 00111232 23332 77888
Q ss_pred EEEe-CC-----CeEEEEECCCCeee
Q 013274 120 VTGS-YD-----HYVKVWDTNCTRVV 139 (446)
Q Consensus 120 ~s~s-~D-----~~i~iWd~~~~~~~ 139 (446)
+.|| .+ ..+.+||..+.+..
T Consensus 302 v~GG~~~~~~~~~~~e~yd~~t~~W~ 327 (656)
T 1k3i_A 302 TIGGSWSGGVFEKNGEVYSPSSKTWT 327 (656)
T ss_dssp EECCCCCSSSCCCCEEEEETTTTEEE
T ss_pred EEeCcccCCcccccceEeCCCCCcce
Confidence 8888 45 57999999877644
No 253
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.88 E-value=0.0054 Score=61.83 Aligned_cols=69 Identities=10% Similarity=0.115 Sum_probs=46.4
Q ss_pred EEEEeCCCeEEEEECCCCeeeEEEecCCc--eEEeeeccCCCCceEEEEee------CCCcEEEEeCCCCceeeeeeC
Q 013274 119 FVTGSYDHYVKVWDTNCTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGT------EDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 119 l~s~s~D~~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lasgs------~d~~v~vwd~~~~~~~~~l~~ 188 (446)
++.++.|+.+..+|..+++.+-....... .+.+...|.-.+.. ++.++ .++.|+.+|.++|+.+.++..
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~-V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVVKDK-VIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEETTE-EEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEECCE-EEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 77788999999999999999877665431 01112222212233 34443 378999999999998877653
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.83 E-value=0.012 Score=54.12 Aligned_cols=110 Identities=11% Similarity=-0.002 Sum_probs=67.4
Q ss_pred eEEEEEccCCCEE-EEeecCCcEEEEecCcCce-eeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-----------Cce
Q 013274 312 VTGLKVTEDGMYL-LSAGSDSRIRLWDVESGRN-TLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-----------TAV 378 (446)
Q Consensus 312 v~~l~fs~dg~~l-~sgs~D~~i~lWd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~ 378 (446)
...|+++|+|++| ++-+.+++|..|++..... ....+. . ... +.-++..+++.+.+.... ..+
T Consensus 187 p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~--~-~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v 262 (322)
T 2fp8_A 187 PGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLV--K-IPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKG 262 (322)
T ss_dssp CCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEE--E-CSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEE
T ss_pred CcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEE--e-CCC-CCCeEECCCCCEEEEecCcccccccCCCccEE
Confidence 4568999999854 5556778999999875321 111111 1 122 556777787775444322 234
Q ss_pred EEEEeecCceEEEeccc----ccceEEEEEcCCCCEEEEeeCCCcEEEeCCCC
Q 013274 379 KAFDIWSGKTCLTFRGH----YEYVNCCCFSSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 379 ~~~d~~~~~~~~~l~gH----~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~ 427 (446)
..++- +++.+..+... ...++++++ .++++.++....+.|.+++++.
T Consensus 263 ~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 263 IKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp EEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred EEECC-CCCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 44443 46666666544 245777877 5777788877888899998763
No 255
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.82 E-value=0.0077 Score=60.60 Aligned_cols=72 Identities=18% Similarity=0.160 Sum_probs=47.4
Q ss_pred CcEEEEEeCCCeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCc-----eEEEEee------CCCcEEEEeCCCCce
Q 013274 116 TGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASH-----MLIAAGT------EDVQVRLCDIASGAI 182 (446)
Q Consensus 116 ~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-----~~lasgs------~d~~v~vwd~~~~~~ 182 (446)
+..++.++.|+.|...|.++++.+-.+...... +.+..+|.-.+. ..++.++ .++.|+.+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 457778889999999999999998777654310 111112211111 1455554 378999999999998
Q ss_pred eeeee
Q 013274 183 SQTLS 187 (446)
Q Consensus 183 ~~~l~ 187 (446)
+....
T Consensus 197 ~W~~~ 201 (582)
T 1flg_A 197 IWMRP 201 (582)
T ss_dssp EEEEE
T ss_pred EeecC
Confidence 87654
No 256
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.77 E-value=0.025 Score=53.71 Aligned_cols=220 Identities=6% Similarity=-0.036 Sum_probs=124.7
Q ss_pred CCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSE 203 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~ 203 (446)
....|+..++.................+++.+. +..++.+-...+.|+.++++.+.....+.........+++.+.+.
T Consensus 94 ~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~--~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g 171 (386)
T 3v65_B 94 NRIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHD 171 (386)
T ss_dssp CBSCEEEECTTSCCCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTT
T ss_pred cCccceeeccCCCcEEEEecCCCccEEEEEecC--CCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCC
Confidence 346788888876654443333344555666543 345666666678899999887654433333333446677777666
Q ss_pred eEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecccce
Q 013274 204 WILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGR 283 (446)
Q Consensus 204 ~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (446)
.++++-...+.|.+.++..... ..+
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~-~~l------------------------------------------------------ 196 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHR-KVL------------------------------------------------------ 196 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSC-EEE------------------------------------------------------
T ss_pred eEEEEcCCCCeEEEEeCCCCce-EEe------------------------------------------------------
Confidence 6666666666676666542110 000
Q ss_pred eecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecC-CcEEEEecCcCceeeeeeeEEEeecCCCeEE
Q 013274 284 IPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSD-SRIRLWDVESGRNTLVNFETVRLQTSKPIQL 361 (446)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D-~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~ 361 (446)
. .........|+++|.+. ++++-... +.|...++........ . ......+.-+
T Consensus 197 --~-------------------~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-~---~~~~~~PnGl 251 (386)
T 3v65_B 197 --L-------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRII-A---DTHLFWPNGL 251 (386)
T ss_dssp --E-------------------CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEE-E---CSSCSCEEEE
T ss_pred --e-------------------cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEE-E---ECCCCCeeeE
Confidence 0 00012357788888655 44554444 6788888765322111 0 0112245567
Q ss_pred EEcCCCcEEEEeCC--CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 362 ATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 362 ~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
++.++...++++.. ..+..+++........+.........+++ .++..+++-...+.|...+..
T Consensus 252 avd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~ 317 (386)
T 3v65_B 252 TIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKF 317 (386)
T ss_dssp EEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEECC
Confidence 88876666665533 45666665432222333444556788888 456677777778888888743
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.70 E-value=0.041 Score=53.06 Aligned_cols=112 Identities=11% Similarity=0.037 Sum_probs=61.6
Q ss_pred eEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCC----cEEEEeCCCCce
Q 013274 107 SSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDV----QVRLCDIASGAI 182 (446)
Q Consensus 107 ~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~----~v~vwd~~~~~~ 182 (446)
..+++.|.+...|+.+...+.|+.+|++.+..............+++.+.. ..++++...++ .+.+++.+ +..
T Consensus 140 ~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G--~~lyvad~~~~~~~~~v~~~~~~-g~~ 216 (430)
T 3tc9_A 140 VWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEA--DSMIITNDQNNNDRPNNYILTRE-SGF 216 (430)
T ss_dssp CEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTS--SEEEEEECCSCTTSEEEEEEEGG-GTS
T ss_pred CEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCC--CEEEEEeCCCCcccceEEEEeCC-Cce
Confidence 455665412334555544488999999877655444433445667776542 23455543222 23344433 322
Q ss_pred e--eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC
Q 013274 183 S--QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 183 ~--~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
. ..+.. ......++++|++.+++++-..++.|..+|...
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~ 257 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTT 257 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTT
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCC
Confidence 1 23322 233467788884445666666678888888764
No 258
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.69 E-value=0.023 Score=49.76 Aligned_cols=163 Identities=15% Similarity=0.107 Sum_probs=105.6
Q ss_pred CCcc--ceeEEEeecCCCCEEEEeeCCC--cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCC
Q 013274 41 PHKG--SINSLQVDLTEERYLLSGASDS--SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDT 116 (446)
Q Consensus 41 ~H~~--~v~~l~~s~~~~~~l~s~s~Dg--~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~ 116 (446)
||.. ....|.|+ ++.+..|.+.+| +|+.+|+++++... .+. ...+..+. .+.. .++
T Consensus 16 phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~tgkv~~----------~~~-----l~~~~fge-Gi~~--~~~ 75 (243)
T 3mbr_X 16 PHDTTAFTEGLFYL--RGHLYESTGETGRSSVRKVDLETGRILQ----------RAE-----VPPPYFGA-GIVA--WRD 75 (243)
T ss_dssp ECCTTCCEEEEEEE--TTEEEEEECCTTSCEEEEEETTTCCEEE----------EEE-----CCTTCCEE-EEEE--ETT
T ss_pred CCCCccccccEEEE--CCEEEEECCCCCCceEEEEECCCCCEEE----------EEe-----CCCCccee-EEEE--eCC
Confidence 6764 45689997 367888888865 89999998875321 000 01111111 1122 244
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC--CC---C
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG--HR---D 191 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~--h~---~ 191 (446)
.++...-.++.+.++|.++.+.+.+++..+.-..+ +++ +..+++| ..++.|.++|.++.+...++.- +. .
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~Gwgl--t~d--g~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPGEGWAL--TSD--DSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSSCCCEE--EEC--SSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCCCceEE--eeC--CCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 55556667899999999999999999876543333 332 2345555 4478899999999988777653 21 2
Q ss_pred CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEee
Q 013274 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230 (446)
Q Consensus 192 ~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~ 230 (446)
.+..+.+. +++ +++..-.+..|.+-|.++++++..++
T Consensus 151 ~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 151 NLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp CEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred cceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEE
Confidence 34556665 444 55555457889999999988877764
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.64 E-value=0.0025 Score=65.42 Aligned_cols=74 Identities=5% Similarity=0.108 Sum_probs=49.3
Q ss_pred cCCcEEEEEeCCC-------------------eEEEEECCCCeeeEEEecCCc----------eEEeeeccCCCCceEEE
Q 013274 114 VDTGLFVTGSYDH-------------------YVKVWDTNCTRVVMNFKMPGK----------VYRTAMSPLAASHMLIA 164 (446)
Q Consensus 114 ~~~~~l~s~s~D~-------------------~i~iWd~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~la 164 (446)
++.++++.++.++ .|..+|.++++.+-.++...+ .....+........+++
T Consensus 239 ~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~ 318 (668)
T 1kv9_A 239 PELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLM 318 (668)
T ss_dssp TTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEE
T ss_pred CCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEE
Confidence 3556777777665 499999999999888775311 11111111111123688
Q ss_pred EeeCCCcEEEEeCCCCceeeeee
Q 013274 165 AGTEDVQVRLCDIASGAISQTLS 187 (446)
Q Consensus 165 sgs~d~~v~vwd~~~~~~~~~l~ 187 (446)
.++.++.++++|.++|+.+...+
T Consensus 319 ~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 319 QAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp ECCTTSEEEEEETTTCCEEEEEE
T ss_pred EECCCCEEEEEECCCCCEecccc
Confidence 88999999999999999875443
No 260
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.53 E-value=0.12 Score=53.95 Aligned_cols=283 Identities=11% Similarity=0.109 Sum_probs=156.1
Q ss_pred eeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC
Q 013274 46 INSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD 125 (446)
Q Consensus 46 v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D 125 (446)
|.++..+. ++.+. .|..++.+..||.+++.... . . ...+...|.++...+ ++.+ ..|..+
T Consensus 175 i~~i~~d~-~g~lw-igt~~~Gl~~~~~~~~~~~~----------~--~----~~~~~~~i~~i~~d~-~g~l-wigt~~ 234 (795)
T 4a2l_A 175 IASTLYRQ-GDQIY-IGTSTDGLYTYSITQKTFEK----------V--I----PILGTKQIQAILQQS-PTRI-WVATEG 234 (795)
T ss_dssp CEEEEEEE-TTEEE-EEESSSCEEEEETTTCCEEE----------C--C--------CCCEEEEEEEE-TTEE-EEEEBS
T ss_pred eEEEEECC-CCCEE-EEECCCCEEEEeCCCCeEEE----------e--c----CCCCCCeeEEEEEcC-CCCE-EEEECC
Confidence 88888875 45544 46665568899876543110 0 0 001233466655544 4544 445545
Q ss_pred CeEEEEECCCCeeeEEEec---------CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC-------C
Q 013274 126 HYVKVWDTNCTRVVMNFKM---------PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG-------H 189 (446)
Q Consensus 126 ~~i~iWd~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~-------h 189 (446)
+-+.+||..+++... +.. ...+.++.... .+. +-.|+.+ -|.+||..++........ .
T Consensus 235 ~Gl~~~~~~~~~~~~-~~~~~~~~~~l~~~~i~~i~~d~--~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~ 308 (795)
T 4a2l_A 235 AGLFLINPKTKEIKN-YLHSPSNPKSISSNYIRSLAMDS--QNR--LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLS 308 (795)
T ss_dssp SCEEEEETTTTEEEE-ECCCTTCTTSCSCSBEEEEEECT--TSC--EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCS
T ss_pred CCeEEEeCCCCeEEE-eecCCCCccccCCCeEEEEEEcC--CCC--EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCC
Confidence 458999987765433 221 12344444332 222 3334444 588999887754332211 2
Q ss_pred CCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcccc
Q 013274 190 RDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKR 269 (446)
Q Consensus 190 ~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (446)
...|.++...+++. |..|+.++-|..|+..+.. +..+.....
T Consensus 309 ~~~i~~i~~D~~g~--lWigt~~~Gl~~~~~~~~~-~~~~~~~~~----------------------------------- 350 (795)
T 4a2l_A 309 QRSVRSIFMDSQGG--MWLGTYFGGLNYYHPIRNR-FKNIRNIPY----------------------------------- 350 (795)
T ss_dssp SSCEEEEEECTTSC--EEEEESSSCEEEECGGGGS-SEEECCCTT-----------------------------------
T ss_pred CCcEEEEEEeCCcC--EEEEECCCCeEEeCCCccc-ceEEcCCCC-----------------------------------
Confidence 35799999888775 4567777778888865432 111100000
Q ss_pred ccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeee
Q 013274 270 SANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFE 349 (446)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~ 349 (446)
. ..-....|.++...++|...+ |+.++-|..||..+++.......
T Consensus 351 --------------------------~--------~~l~~~~V~~i~~d~~g~lWi-Gt~~~Gl~~~~~~~~~~~~~~~~ 395 (795)
T 4a2l_A 351 --------------------------K--------NSLSDNVVSCIVEDKDKNLWI-GTNDGGLNLYNPITQRFTSYTLQ 395 (795)
T ss_dssp --------------------------S--------SSCSCSSEEEEEECTTSCEEE-EESSSCEEEECTTTCCEEEECCC
T ss_pred --------------------------C--------CCCCCCeeEEEEECCCCCEEE-EECCCCeEEEcCCCCcEEEEecC
Confidence 0 000123488999998887655 67776799999876542211100
Q ss_pred EE----EeecCCCeEEEEcCCCcEEEEeC-CCceEEEEeecCceEEEec----ccccceEEEEEcCCCCEEEEeeCCCcE
Q 013274 350 TV----RLQTSKPIQLATTQDPAVVFVPC-MTAVKAFDIWSGKTCLTFR----GHYEYVNCCCFSSQDQELYTGGNDRQI 420 (446)
Q Consensus 350 ~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~l~----gH~~~v~~~~fSpd~~~lvtgs~D~~v 420 (446)
.. .+.......++..+++..+++++ ...+..++..+++...... .+...|.++...++|++.+... +-|
T Consensus 396 ~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl 473 (795)
T 4a2l_A 396 EDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SAL 473 (795)
T ss_dssp ------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCE
T ss_pred CCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec--Cce
Confidence 00 01112233445556666344444 4678888876665433221 2346799999999988766544 458
Q ss_pred EEeCCCCCC
Q 013274 421 LVWCPSRHI 429 (446)
Q Consensus 421 ~vW~~~~~~ 429 (446)
.+|++.+..
T Consensus 474 ~~~~~~~~~ 482 (795)
T 4a2l_A 474 VRFNPEQRS 482 (795)
T ss_dssp EEEETTTTE
T ss_pred eEEeCCCCe
Confidence 888887653
No 261
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.46 E-value=0.072 Score=49.68 Aligned_cols=219 Identities=6% Similarity=-0.038 Sum_probs=125.9
Q ss_pred CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCe
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEW 204 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~ 204 (446)
...|+..++.................+++.+. +..++.+-...+.|+.++++.+.....+.........+++.+.+..
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~--~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ 129 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHR--RELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDK 129 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTE
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEecc--ccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCe
Confidence 34577777765544333333334455565543 3456666666788999998876544333333344567888876666
Q ss_pred EEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccccee
Q 013274 205 ILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSVGRI 284 (446)
Q Consensus 205 ~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (446)
++++-...+.|.+.++..... ..+.
T Consensus 130 ly~~d~~~~~I~~~~~dG~~~-~~l~------------------------------------------------------ 154 (349)
T 3v64_C 130 LYWTDSGTSRIEVANLDGAHR-KVLL------------------------------------------------------ 154 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSC-EEEE------------------------------------------------------
T ss_pred EEEEcCCCCeEEEEcCCCCce-EEEE------------------------------------------------------
Confidence 667766677888887653210 0000
Q ss_pred ecCCccccccCCCcccccccccccccCeEEEEEccCC-CEEEEeecC-CcEEEEecCcCceeeeeeeEEEeecCCCeEEE
Q 013274 285 PAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDG-MYLLSAGSD-SRIRLWDVESGRNTLVNFETVRLQTSKPIQLA 362 (446)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg-~~l~sgs~D-~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (446)
.........|+++|.+ ..+.+-... ++|...++....... ... .....+.-++
T Consensus 155 ---------------------~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~-~~~---~~~~~PnGla 209 (349)
T 3v64_C 155 ---------------------WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRI-IAD---THLFWPNGLT 209 (349)
T ss_dssp ---------------------CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-SCC---SSCSCEEEEE
T ss_pred ---------------------eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEE-EEE---CCCCCcceEE
Confidence 0001225778899854 445555555 778888876532111 010 1123456688
Q ss_pred EcCCCcEEEEeCC--CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 363 TTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 363 ~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
+.++...++++.. ..+..+++.-......+.........+++ .++...++-...+.|...+..
T Consensus 210 ~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~ 274 (349)
T 3v64_C 210 IDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKF 274 (349)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETT
T ss_pred EeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEcc
Confidence 8876666666533 45667776432223334444566788888 456666777677788888743
No 262
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.42 E-value=0.09 Score=49.79 Aligned_cols=114 Identities=8% Similarity=-0.080 Sum_probs=69.2
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC-CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
+..+.+.+.++.++.+-...+.|..++++.......+... .....+++.+. +..++.+-...+.|.+.+++......
T Consensus 118 ~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~--~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV--HDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETT--TTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred cEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeC--CCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 4466777656666667667789999998865533322211 11223444332 34455666667788888887654433
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCC-CcEEEEEcc
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCD-GAIRFWDIR 221 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~ 221 (446)
.+...-.....+++.|.+.+++++-... +.|...++.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 3443445668899998777766665444 566666654
No 263
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.41 E-value=0.17 Score=52.84 Aligned_cols=283 Identities=12% Similarity=0.075 Sum_probs=157.3
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
..|++|..+. ++. |..|..+ .|.+||.+++.... +. ........-....|.++..-+ ++ .+-.|.
T Consensus 263 ~~i~~i~~d~-~g~-lWigt~~-Gl~~~~~~~~~~~~----~~------~~~~~~~~l~~~~i~~i~~D~-~g-~lWigt 327 (795)
T 4a2l_A 263 NYIRSLAMDS-QNR-LWIGTFN-DLNIYHEGTDSFAS----YS------SNPVENGSLSQRSVRSIFMDS-QG-GMWLGT 327 (795)
T ss_dssp SBEEEEEECT-TSC-EEEEESS-CEEEEETTTTEEEE----EC------CCTTSTTSCSSSCEEEEEECT-TS-CEEEEE
T ss_pred CeEEEEEEcC-CCC-EEEEeCC-hhheEcCCCCeEEE----Ee------cCCCCCCCCCCCcEEEEEEeC-Cc-CEEEEE
Confidence 5689998875 455 4445444 58899876542100 00 000000011234576665543 44 566677
Q ss_pred CCCeEEEEECCCCeeeEEEec--------CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeC-------
Q 013274 124 YDHYVKVWDTNCTRVVMNFKM--------PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSG------- 188 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~------- 188 (446)
.++-|.+++..+.... .+.. ...+.++.... .+. |-.|+.++-|..||..++........
T Consensus 328 ~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~--~g~--lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~ 402 (795)
T 4a2l_A 328 YFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDK--DKN--LWIGTNDGGLNLYNPITQRFTSYTLQEDESARG 402 (795)
T ss_dssp SSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECT--TSC--EEEEESSSCEEEECTTTCCEEEECCC------C
T ss_pred CCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECC--CCC--EEEEECCCCeEEEcCCCCcEEEEecCCCCcccC
Confidence 7788999987554322 2221 12244443322 222 34466677799999887754332211
Q ss_pred -CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCcc
Q 013274 189 -HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQ 267 (446)
Q Consensus 189 -h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (446)
....|.++...+++.. |..|+.++-+..||.+++... .+....
T Consensus 403 l~~~~v~~i~~d~~g~~-lWigt~~~Gl~~~d~~~~~~~-~~~~~~---------------------------------- 446 (795)
T 4a2l_A 403 IGSNNIKAVYVDEKKSL-VYIGTHAGGLSILHRNSGQVE-NFNQRN---------------------------------- 446 (795)
T ss_dssp CSCSCEEEEEEETTTTE-EEEEETTTEEEEEETTTCCEE-EECTTT----------------------------------
T ss_pred CCCccEEEEEEcCCCCE-EEEEeCcCceeEEeCCCCcEE-EeecCC----------------------------------
Confidence 2357899988877751 345677677999997764321 110000
Q ss_pred ccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeee
Q 013274 268 KRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVN 347 (446)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~ 347 (446)
+ ......|.++...++|...+.. .+ -|.+||..+++...
T Consensus 447 ----------------------------~---------~l~~~~v~~i~~d~~g~lwigt-~~-Gl~~~~~~~~~~~~-- 485 (795)
T 4a2l_A 447 ----------------------------S---------QLVNENVYAILPDGEGNLWLGT-LS-ALVRFNPEQRSFTT-- 485 (795)
T ss_dssp ----------------------------S---------CCSCSCEEEEEECSSSCEEEEE-SS-CEEEEETTTTEEEE--
T ss_pred ----------------------------C---------CcCCCeeEEEEECCCCCEEEEe-cC-ceeEEeCCCCeEEE--
Confidence 0 0012348888888888866544 44 48899987754221
Q ss_pred eeEE----EeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEec-------ccccceEEEEEcCCCCEEEEeeC
Q 013274 348 FETV----RLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFR-------GHYEYVNCCCFSSQDQELYTGGN 416 (446)
Q Consensus 348 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~-------gH~~~v~~~~fSpd~~~lvtgs~ 416 (446)
+... .+.......+...+++.+.+... ..+..++..+++. .+. .+...|.++...++|++.++..
T Consensus 486 ~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~- 561 (795)
T 4a2l_A 486 IEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR- 561 (795)
T ss_dssp CCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-
T ss_pred ccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-
Confidence 1110 01111223344555565555444 7788888876654 222 2456799999999998766544
Q ss_pred CCcEEEeCCCCC
Q 013274 417 DRQILVWCPSRH 428 (446)
Q Consensus 417 D~~v~vW~~~~~ 428 (446)
. -|..|++.+.
T Consensus 562 ~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 562 E-GFYCFNEKDK 572 (795)
T ss_dssp S-CEEEEETTTT
T ss_pred C-CceeECCCCC
Confidence 2 5778887654
No 264
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.38 E-value=0.11 Score=49.97 Aligned_cols=241 Identities=12% Similarity=0.041 Sum_probs=125.2
Q ss_pred EeEEEEeec-CCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCC---C-cEEEEeCCCC
Q 013274 106 ISSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTED---V-QVRLCDIASG 180 (446)
Q Consensus 106 V~~~~~~~~-~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d---~-~v~vwd~~~~ 180 (446)
...+++.+. +...|+.+...+.|+.+|+.+++.............+++.+.. .++++-..+ . .+...+...+
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG---~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNG---DMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTC---CEEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCC---CEEEEcCCCCcccceEEEEECCCC
Confidence 345666652 2334444444489999999887766544333345667776643 244443311 1 1333333222
Q ss_pred ce-eeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 181 AI-SQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 181 ~~-~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
.. ...+. .-.....++++|.+..++++-..++.|+.+|..++.....+-
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~----------------------------- 267 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV----------------------------- 267 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-----------------------------
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-----------------------------
Confidence 11 01121 223345677888334455666667778888775443211100
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecCCcEEEEec
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSDSRIRLWDV 338 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D~~i~lWd~ 338 (446)
.. +....-..|+|+|+|. ++++-...++|+.++.
T Consensus 268 --------------------------~~-------------------~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~ 302 (433)
T 4hw6_A 268 --------------------------MM-------------------DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDY 302 (433)
T ss_dssp --------------------------EC-------------------SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEB
T ss_pred --------------------------cc-------------------CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeC
Confidence 00 0001123589999998 5566677788999876
Q ss_pred Cc--Ccee-eeeeeEE------------EeecCCCeEEEE---------cCCCcEEEEeCC-CceEEEEeecCceEEEec
Q 013274 339 ES--GRNT-LVNFETV------------RLQTSKPIQLAT---------TQDPAVVFVPCM-TAVKAFDIWSGKTCLTFR 393 (446)
Q Consensus 339 ~~--~~~~-~~~~~~~------------~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~ 393 (446)
.. +.-. ...+... ......+..+++ .+++.+.++... ..++.++. ++. +.++.
T Consensus 303 d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G~-v~t~~ 380 (433)
T 4hw6_A 303 NRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EGR-VTTYA 380 (433)
T ss_dssp CTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TSE-EEEEE
T ss_pred CCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CCC-EEEEE
Confidence 52 2110 0000000 001123445666 444444444332 35666653 443 33332
Q ss_pred cc------------------ccceEEEEEc-CCCCEEEEeeCCCcEEEeCCC
Q 013274 394 GH------------------YEYVNCCCFS-SQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 394 gH------------------~~~v~~~~fS-pd~~~lvtgs~D~~v~vW~~~ 426 (446)
|. -.....|++. +++.++++-...+.|+..+++
T Consensus 381 G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 381 GRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred eCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 21 2347899999 788888888788889988765
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.36 E-value=0.085 Score=49.17 Aligned_cols=114 Identities=8% Similarity=-0.082 Sum_probs=70.5
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQ 184 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~ 184 (446)
+..+.+.+.++.++.+-...+.|..++++.......... ......+++.+. +..++.+-...+.|.+.+++......
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~--~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWV--HDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecC--CCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 456677765666666766778999999886543332211 112234444432 34566666667889999987654333
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCC-CcEEEEEcc
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCD-GAIRFWDIR 221 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~ 221 (446)
.+...-.....++++|.+..++++-... +.|...++.
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 3333445568899998777766665554 667666654
No 266
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.29 E-value=0.099 Score=47.57 Aligned_cols=110 Identities=14% Similarity=0.068 Sum_probs=61.8
Q ss_pred EEccCCCEEEEeecCCcEEEEecCcCceeeeeeeE-E---E--eecCCCeEEEEcCCCcEEEEeC--CCceEEEEeec-C
Q 013274 316 KVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFET-V---R--LQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWS-G 386 (446)
Q Consensus 316 ~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~-~---~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~-~ 386 (446)
++.+++..+++...++.|.++|..+++........ + . .....+.-+ ++++..++++. ...+..+++.. +
T Consensus 123 ~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g 200 (306)
T 2p4o_A 123 TPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTD 200 (306)
T ss_dssp EESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTS
T ss_pred cccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCC
Confidence 34455555565556778888887653211110000 0 0 000112222 56666555543 34677888764 3
Q ss_pred ce--EEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 387 KT--CLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 387 ~~--~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
+. ...+. .......+++.+||++.++....+.|.++++++.
T Consensus 201 ~~~~~~~~~-~~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~G~ 243 (306)
T 2p4o_A 201 KPGEPEIFV-EQTNIDDFAFDVEGNLYGATHIYNSVVRIAPDRS 243 (306)
T ss_dssp CBCCCEEEE-ESCCCSSEEEBTTCCEEEECBTTCCEEEECTTCC
T ss_pred CCCccEEEe-ccCCCCCeEECCCCCEEEEeCCCCeEEEECCCCC
Confidence 32 12221 1245678999999999888888889999998754
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.23 E-value=0.21 Score=50.17 Aligned_cols=59 Identities=10% Similarity=0.050 Sum_probs=40.5
Q ss_pred CcEEEEeCCCCceeeeeeCCCC----------CeEEEEEe-cCCC--eEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 170 VQVRLCDIASGAISQTLSGHRD----------GIMTVEWS-TSSE--WILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 170 ~~v~vwd~~~~~~~~~l~~h~~----------~v~sv~~s-~~~~--~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
..|..+|.++|+.+..++.... ++. +... .+++ .+++.++.+|.+...|.++++.+-..
T Consensus 278 ~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~ 349 (599)
T 1w6s_A 278 MTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSAN 349 (599)
T ss_dssp SEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecc
Confidence 4799999999998877764221 122 2222 3453 35677889999999999998765543
No 268
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.12 E-value=0.16 Score=46.65 Aligned_cols=114 Identities=11% Similarity=-0.032 Sum_probs=66.7
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeee-EEE-ecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV-MNF-KMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
+.++.|.+.++.++.+-...+.|..++++..... ..+ ..-.....+++.+. +..++.+-...+.|.+++++.....
T Consensus 37 ~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~--~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 37 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL--GEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSCSCE
T ss_pred cEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC--CCeEEEEECCCCEEEEEECCCCcEE
Confidence 4466777656667777777789999998765321 111 11112233444432 3445666666788999998765433
Q ss_pred eeeeCCCCCeEEEEEecCCCeEEEEee-CCCcEEEEEcc
Q 013274 184 QTLSGHRDGIMTVEWSTSSEWILVTGG-CDGAIRFWDIR 221 (446)
Q Consensus 184 ~~l~~h~~~v~sv~~s~~~~~~l~S~s-~Dg~I~iWd~~ 221 (446)
..+...-.....+++.|.+.+++++-. ..+.|...++.
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 153 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 153 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC
Confidence 333344455688999987666555542 24556666553
No 269
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.11 E-value=0.23 Score=48.34 Aligned_cols=112 Identities=12% Similarity=0.108 Sum_probs=64.1
Q ss_pred eEEEEeec-CCcEEEEEeCCCeEEEEECCCCeeeEEEecCC----ceEEeee-------ccCCCCceEEEEeeCCC----
Q 013274 107 SSAIWYPV-DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG----KVYRTAM-------SPLAASHMLIAAGTEDV---- 170 (446)
Q Consensus 107 ~~~~~~~~-~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~----~~~~~~~-------~~~~~~~~~lasgs~d~---- 170 (446)
..+.+.|. .+.++++-...+.|++.|++++.+........ ....+++ .+.. ..++++-..++
T Consensus 142 ~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G--~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA--EYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT--CEEEEEECCCTTGGG
T ss_pred CEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC--CEEEEEeCCCCCccc
Confidence 35566552 34455554545789999998877665444321 2556666 5432 23555544432
Q ss_pred --cEEEEeCCC-Ccee-----eeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 171 --QVRLCDIAS-GAIS-----QTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 171 --~v~vwd~~~-~~~~-----~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
.|.+++... +... ..+..- .....++++|+++.++++-..++.|..+|+.
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 366776444 2221 223221 2335677888666677777778889888875
No 270
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.97 E-value=0.32 Score=50.54 Aligned_cols=114 Identities=4% Similarity=-0.111 Sum_probs=67.7
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCC----eeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCT----RVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~----~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~ 180 (446)
+..+.+.+.++.++++-...+.|+.+++... .....+. .......+++... +..++.+-...+.|.+.+++..
T Consensus 426 ~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~--~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 426 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSS
T ss_pred eEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec--CCcEEEEecCCCeEEEEeCCCC
Confidence 4466666555666667667788999988752 1111111 1122334555433 3456667677889999999865
Q ss_pred ceeeeeeCCCCCeEEEEEecCCCeEEEEeeCC-CcEEEEEcc
Q 013274 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCD-GAIRFWDIR 221 (446)
Q Consensus 181 ~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~ 221 (446)
.....+...-.....|++.|.+.++++|-... +.|...++.
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d 545 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 545 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC
Confidence 54444444445678999999877766664333 567766664
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.93 E-value=0.09 Score=53.67 Aligned_cols=64 Identities=17% Similarity=0.151 Sum_probs=40.0
Q ss_pred CceEEEEeeCCC-----------cEEEEeCCCCcee--eeeeC-CCCCeEEEEEecCCCeEEEEee-CCCcEEEEEccCC
Q 013274 159 SHMLIAAGTEDV-----------QVRLCDIASGAIS--QTLSG-HRDGIMTVEWSTSSEWILVTGG-CDGAIRFWDIRRA 223 (446)
Q Consensus 159 ~~~~lasgs~d~-----------~v~vwd~~~~~~~--~~l~~-h~~~v~sv~~s~~~~~~l~S~s-~Dg~I~iWd~~~~ 223 (446)
+..+++.|+.+. .+.+||+.+++.. ..+.. +.....++++.++++ +++.|+ .++.+.+||..+.
T Consensus 197 ~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~-lyv~GG~~~~~v~~yd~~t~ 275 (656)
T 1k3i_A 197 SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQ-IVVTGGNDAKKTSLYDSSSD 275 (656)
T ss_dssp TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSC-EEEECSSSTTCEEEEEGGGT
T ss_pred CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCC-EEEeCCCCCCceEEecCcCC
Confidence 345666665432 5889999988632 22322 333344567777776 567777 4567999998754
No 272
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.92 E-value=0.24 Score=45.29 Aligned_cols=112 Identities=13% Similarity=0.107 Sum_probs=69.7
Q ss_pred eEEEEEcc-CCCEEEEeec-----------------CCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe
Q 013274 312 VTGLKVTE-DGMYLLSAGS-----------------DSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP 373 (446)
Q Consensus 312 v~~l~fs~-dg~~l~sgs~-----------------D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (446)
...+++.+ +|...++-.. ++.|..||..+++.... ......+.-+++++++..++++
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~-----~~~~~~p~gia~~~dg~~lyv~ 202 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLL-----LKELHVPGGAEVSADSSFVLVA 202 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEE-----EEEESCCCEEEECTTSSEEEEE
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEe-----ccCCccCcceEECCCCCEEEEE
Confidence 56788899 8887776432 36788888776542211 1112345567888988766655
Q ss_pred C--CCceEEEEeecCc--eEEEecccccceEEEEEcCCCCEEEEeeC----------CCcEEEeCCCCCC
Q 013274 374 C--MTAVKAFDIWSGK--TCLTFRGHYEYVNCCCFSSQDQELYTGGN----------DRQILVWCPSRHI 429 (446)
Q Consensus 374 ~--~~~~~~~d~~~~~--~~~~l~gH~~~v~~~~fSpd~~~lvtgs~----------D~~v~vW~~~~~~ 429 (446)
. ...+..+++.... ....+....+ ...+++.++|++.++... .+.|.+++++...
T Consensus 203 d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~G~~ 271 (322)
T 2fp8_A 203 EFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEFGNI 271 (322)
T ss_dssp EGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTTSCE
T ss_pred eCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCCCCE
Confidence 3 2467777775421 1122221223 788999999998887654 4668888886543
No 273
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.92 E-value=0.24 Score=45.30 Aligned_cols=114 Identities=4% Similarity=-0.104 Sum_probs=65.7
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCC----CeeeEEEec-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNC----TRVVMNFKM-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG 180 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~ 180 (446)
+..+.+.+.++.++.+-...+.|..++++. ......+.. -.....+++.+. +..++.+-..++.|.+.|++..
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~--~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT--TTEEEEEETTTTEEEEEETTSS
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec--CCeEEEEECCCCEEEEEeCCCC
Confidence 445667655566666767779999999875 221211211 112344554432 3345566566788999998765
Q ss_pred ceeeeeeCCCCCeEEEEEecCCCeEEEEeeCC-CcEEEEEcc
Q 013274 181 AISQTLSGHRDGIMTVEWSTSSEWILVTGGCD-GAIRFWDIR 221 (446)
Q Consensus 181 ~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~ 221 (446)
.....+...-.....+++.|.+.+++++.... +.|...++.
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 44333333445668999998777666665433 566666653
No 274
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.91 E-value=0.24 Score=45.28 Aligned_cols=219 Identities=8% Similarity=-0.026 Sum_probs=124.1
Q ss_pred CeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC----CceeeeeeCCCCCeEEEEEecC
Q 013274 126 HYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS----GAISQTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 126 ~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~----~~~~~~l~~h~~~v~sv~~s~~ 201 (446)
..|+..|++................+.+.+. +..++.+-..++.|+.+|+++ ......+...-.....+++.+.
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~--~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeC--CCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 4688888887665544443344556666543 335666666778999999876 2222223323344578888876
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
+..++++-...+.|.+.|+........+.
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g~~~~~~~~--------------------------------------------------- 116 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKGVKRKTLFR--------------------------------------------------- 116 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEE---------------------------------------------------
T ss_pred CCeEEEEECCCCEEEEEeCCCCceEEEEE---------------------------------------------------
Confidence 66666776677888888865321100000
Q ss_pred ceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE-EEEeecC-CcEEEEecCcCceeeeeeeEEEeecCCCe
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY-LLSAGSD-SRIRLWDVESGRNTLVNFETVRLQTSKPI 359 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~-l~sgs~D-~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 359 (446)
........++++|.+.+ +++.... +.|...++....... +. ......+.
T Consensus 117 -------------------------~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~--~~--~~~~~~P~ 167 (316)
T 1ijq_A 117 -------------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS--LV--TENIQWPN 167 (316)
T ss_dssp -------------------------CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEE--EE--CSSCSCEE
T ss_pred -------------------------CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEE--EE--ECCCCCce
Confidence 00112567888986554 4444333 678888776432111 10 01123456
Q ss_pred EEEEcCCCcEEEEeCC--CceEEEEeecCceEEEec---ccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 360 QLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFR---GHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~---gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
-+++.++...++.+.. ..+..+++. +...+.+. ........+++. ++..+++-...+.|...++..+
T Consensus 168 gla~d~~~~~lY~~D~~~~~I~~~d~d-g~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 168 GITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EEEEeccCCEEEEEECCCCeEEEEecC-CCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 6788877666665533 467777764 33333332 223456788885 4666777777788888887533
No 275
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.82 E-value=0.31 Score=45.05 Aligned_cols=112 Identities=8% Similarity=0.215 Sum_probs=64.5
Q ss_pred EEEEE--ccC-CC-EEEEeecCCcEEEEecCc---CceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEee-
Q 013274 313 TGLKV--TED-GM-YLLSAGSDSRIRLWDVES---GRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIW- 384 (446)
Q Consensus 313 ~~l~f--s~d-g~-~l~sgs~D~~i~lWd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~- 384 (446)
..+++ +|. ++ |+.....++.+..|++.. ++........+.+ .+.+--+++.+....++++-.+ +.+|.+.
T Consensus 131 yGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~eEd-~GIw~~da 208 (355)
T 3amr_A 131 YGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIAEED-EAIWKFSA 208 (355)
T ss_dssp CCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEEETT-TEEEEEEC
T ss_pred eEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEeccc-ceEEEEeC
Confidence 33555 664 44 677788889999998843 2211111222222 1223334555566777776554 4467664
Q ss_pred ------cCceEEEe-cccc-cceEEEEE--cCCCC--EEEEeeCCCcEEEeCCC
Q 013274 385 ------SGKTCLTF-RGHY-EYVNCCCF--SSQDQ--ELYTGGNDRQILVWCPS 426 (446)
Q Consensus 385 ------~~~~~~~l-~gH~-~~v~~~~f--Spd~~--~lvtgs~D~~v~vW~~~ 426 (446)
+++.+..+ .+|- ..+..|++ .++++ +|+|+-.+.+.-||+..
T Consensus 209 ~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 209 EPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp STTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 23344443 2333 37888988 56666 45566578899999885
No 276
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=96.81 E-value=0.5 Score=47.35 Aligned_cols=79 Identities=20% Similarity=0.161 Sum_probs=47.0
Q ss_pred cCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC-CceEEEEeecCceEEEecccccce-EEEEEcC
Q 013274 329 SDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM-TAVKAFDIWSGKTCLTFRGHYEYV-NCCCFSS 406 (446)
Q Consensus 329 ~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~~~~~~l~gH~~~v-~~~~fSp 406 (446)
.++.|.-||+.+++..-.. . ............ .+.++|.++. ..++.+|..+|+.+-.++...+.. .-+.+..
T Consensus 464 ~~G~l~A~D~~tG~~~W~~-~---~~~~~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~ 538 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEH-K---EHLPLWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQ 538 (582)
T ss_dssp CSEEEEEECTTTCCEEEEE-E---ESSCCCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEE
T ss_pred CcceEEEEECCCCCEEEEe-c---CCCCCcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEE
Confidence 3688999999998643211 1 111110001112 2455666544 578999999999988776554332 3467778
Q ss_pred CCCEEE
Q 013274 407 QDQELY 412 (446)
Q Consensus 407 d~~~lv 412 (446)
||+..+
T Consensus 539 ~G~qYv 544 (582)
T 1flg_A 539 DGEQYL 544 (582)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 887544
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.72 E-value=0.067 Score=55.60 Aligned_cols=119 Identities=9% Similarity=0.046 Sum_probs=66.5
Q ss_pred cCccc-cEeEEEEeecCCcEEE-EEeCC----CeEEEEECCCC-eeeEEEecCCceEEeeeccCCCCceEEEEeeCC---
Q 013274 100 HGHKY-AISSAIWYPVDTGLFV-TGSYD----HYVKVWDTNCT-RVVMNFKMPGKVYRTAMSPLAASHMLIAAGTED--- 169 (446)
Q Consensus 100 ~gh~~-~V~~~~~~~~~~~~l~-s~s~D----~~i~iWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d--- 169 (446)
.+|.. .+....++|+|+++|| +.+.+ .+|+++|++++ +.+.. ..........+++++ ..|+....|
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~~~~~~~~~WspDg---~~l~y~~~d~~~ 244 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KVSGTNGEIVWGPDH---TSLFYVTKDETL 244 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CEEEECSCCEECSST---TEEEEEEECTTC
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cccCceeeEEEecCC---CEEEEEEECCCC
Confidence 34553 5666777723787776 33333 35999999988 63211 011111234566643 234433433
Q ss_pred --CcEEEEeCCCCce--eeeee-CCCCCeEEEEEecCCCeEEEEeeCC--CcEEEEEccC
Q 013274 170 --VQVRLCDIASGAI--SQTLS-GHRDGIMTVEWSTSSEWILVTGGCD--GAIRFWDIRR 222 (446)
Q Consensus 170 --~~v~vwd~~~~~~--~~~l~-~h~~~v~sv~~s~~~~~~l~S~s~D--g~I~iWd~~~ 222 (446)
..|+++++.++.. ...+. .+.....++.|+|++++++++.... ..|.++|+.+
T Consensus 245 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~ 304 (751)
T 2xe4_A 245 RENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRK 304 (751)
T ss_dssp CEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSS
T ss_pred CCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCC
Confidence 3688899987642 22222 2334567889999999876665432 3455566543
No 278
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.78 Score=47.67 Aligned_cols=286 Identities=10% Similarity=0.048 Sum_probs=147.4
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEe
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGS 123 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s 123 (446)
..|.+|..+. ++.+.+ |..+ .+.+||..++.... + .........-....|.++...+ ++ .+..|.
T Consensus 211 ~~i~~i~~d~-~g~lwi-gt~~-Gl~~~d~~~~~~~~----~------~~~~~~~~~l~~~~i~~i~~d~-~g-~lWigt 275 (781)
T 3v9f_A 211 NDVRCIYKDT-NGNIWI-GTSK-GLALFNANTETFTN----F------HNNPGNIHGALSSYIFSIKQLK-DN-KLWIAT 275 (781)
T ss_dssp SSEEEEEECT-TCCEEE-EETT-EEEEEETTTTEEEC---------------------CCCCEEEEEECT-TS-EEEEEE
T ss_pred CceeEEEEcC-CCCEEE-EeCC-cHheECCCCCcEEE----E------EcCCCccccccCceEEEEEECC-CC-CEEEEe
Confidence 4588888864 455444 4444 68889976543110 0 0000000001123466655432 44 555666
Q ss_pred CCCeEEEEECCCCeeeEEEe--------------c-CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee-
Q 013274 124 YDHYVKVWDTNCTRVVMNFK--------------M-PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS- 187 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~--------------~-~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~- 187 (446)
..+-|.++|..+........ + ...+.++.... .+. |-.|+.++-|..++..++.......
T Consensus 276 ~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~--~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~ 351 (781)
T 3v9f_A 276 ELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDS--FNN--IWIGTWGGGINFISNAPPTFHTWSYS 351 (781)
T ss_dssp SSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECS--SCC--EEEEEBSSCEEEECSSCCSCEEEC--
T ss_pred CCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeC--CCC--EEEEecCCeEEEeCCCCCcceeeccC
Confidence 65668889987655322111 1 11233333222 222 3445556678888887664322110
Q ss_pred --------CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCC
Q 013274 188 --------GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNS 259 (446)
Q Consensus 188 --------~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (446)
-....|.++...+++. |..|+.++-+..||..++.. ..+ ..
T Consensus 352 ~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~~~~~~~-~~~---~~------------------------- 400 (781)
T 3v9f_A 352 PTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFENGKRVA-IYN---KE------------------------- 400 (781)
T ss_dssp --CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEETTEEEE-ECC------------------------------
T ss_pred ccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEECCCCeE-EEc---cC-------------------------
Confidence 0235689998877765 34566566688888653211 000 00
Q ss_pred CcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecC
Q 013274 260 SVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVE 339 (446)
Q Consensus 260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~ 339 (446)
. .......|.++...++|.+.+ |+.++-|..+|..
T Consensus 401 ------------------------------------~--------~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~ 435 (781)
T 3v9f_A 401 ------------------------------------N--------RELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTR 435 (781)
T ss_dssp -----------------------------------------------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSS
T ss_pred ------------------------------------C--------CCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCC
Confidence 0 000123488888888887665 6666668899887
Q ss_pred cCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEeccc-----ccceEEEEEcCCCCEEEEe
Q 013274 340 SGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRGH-----YEYVNCCCFSSQDQELYTG 414 (446)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~gH-----~~~v~~~~fSpd~~~lvtg 414 (446)
+++... +............+...+++. +.+++...+..++..+++........ ...|.++...++|++.+..
T Consensus 436 ~~~~~~--~~~~~~~~~~v~~i~~d~~g~-lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt 512 (781)
T 3v9f_A 436 LKKFQI--IELEKNELLDVRVFYEDKNKK-IWIGTHAGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGT 512 (781)
T ss_dssp SCEEEE--CCSTTTCCCCEEEEEECTTSE-EEEEETTEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEE
T ss_pred CCcEEE--eccCCCCCCeEEEEEECCCCC-EEEEECCceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEE
Confidence 654211 110000011222333444444 44444467778887665543322222 4679999999999877654
Q ss_pred eCCCcEEEeCCCCC
Q 013274 415 GNDRQILVWCPSRH 428 (446)
Q Consensus 415 s~D~~v~vW~~~~~ 428 (446)
. ++-|..+++.+.
T Consensus 513 ~-~~Gl~~~~~~~~ 525 (781)
T 3v9f_A 513 F-GGGVGIYTPDMQ 525 (781)
T ss_dssp S-SSCEEEECTTCC
T ss_pred c-CCCEEEEeCCCC
Confidence 3 334667887654
No 279
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.65 E-value=0.0052 Score=63.30 Aligned_cols=92 Identities=16% Similarity=0.130 Sum_probs=51.0
Q ss_pred eEEEEEccCC-CEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC--CCceEEEEeecCce
Q 013274 312 VTGLKVTEDG-MYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC--MTAVKAFDIWSGKT 388 (446)
Q Consensus 312 v~~l~fs~dg-~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~~~~~ 388 (446)
.+.|+|+|++ .++++-+..++|..+|+........ +. .......+..+++..+ .+++.. ...|..++..+++.
T Consensus 542 PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~-~~-~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~ 617 (699)
T 1n7d_A 542 PNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTI-LE-DEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSD 617 (699)
T ss_dssp CCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEE-CC-CSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEE
T ss_pred ccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEE-Ee-cCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCc
Confidence 4568899874 5556667778899999865322111 11 0011123333444333 444443 34677777777877
Q ss_pred EEEecccccceEEEEEcCC
Q 013274 389 CLTFRGHYEYVNCCCFSSQ 407 (446)
Q Consensus 389 ~~~l~gH~~~v~~~~fSpd 407 (446)
+..+......++.|++.++
T Consensus 618 ~~~i~~~~~~P~~i~v~~~ 636 (699)
T 1n7d_A 618 VNLLAENLLSPEDMVLFHQ 636 (699)
T ss_dssp EECCCTTCSSCCCCCBCSS
T ss_pred eEEeecCCCCCcEEEEeCc
Confidence 7766554445566655544
No 280
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=96.58 E-value=0.29 Score=50.78 Aligned_cols=144 Identities=10% Similarity=0.074 Sum_probs=78.4
Q ss_pred ceeEEEee-cCCCCEEEEe-eCCC----cEEEEEcccC-cCCCCCCccccccceEEeccccccCccccEeEEEEeecCCc
Q 013274 45 SINSLQVD-LTEERYLLSG-ASDS----SVAVYDVQRA-TDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTG 117 (446)
Q Consensus 45 ~v~~l~~s-~~~~~~l~s~-s~Dg----~i~lWd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~ 117 (446)
.+...+|| | +|++||-+ +.+| +|+++|++++ .... ..+ ......+.|+| |++
T Consensus 175 ~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~--~~~-----------------~~~~~~~~Wsp-Dg~ 233 (751)
T 2xe4_A 175 DVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA--DKV-----------------SGTNGEIVWGP-DHT 233 (751)
T ss_dssp EEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCCC--CCE-----------------EEECSCCEECS-STT
T ss_pred EEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeCC--ccc-----------------cCceeeEEEec-CCC
Confidence 67788999 7 56766644 3233 5999999876 4211 000 00112456776 666
Q ss_pred EEEEEeCC-----CeEEEEECCCCee--eEEEecC--CceEEeeeccCCCCceEEEEee--CCCcEEEEeCCCCc-ee--
Q 013274 118 LFVTGSYD-----HYVKVWDTNCTRV--VMNFKMP--GKVYRTAMSPLAASHMLIAAGT--EDVQVRLCDIASGA-IS-- 183 (446)
Q Consensus 118 ~l~s~s~D-----~~i~iWd~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~lasgs--~d~~v~vwd~~~~~-~~-- 183 (446)
.|+-...| ..|.++++.+++. ...+... .......++++.. .++++.. ....|+++|+.++. ..
T Consensus 234 ~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~--~l~~~~~~~~~~~l~~~d~~~~~~~~~~ 311 (751)
T 2xe4_A 234 SLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTN--TLCIGSQSPETAEVHLLDLRKGNAHNTL 311 (751)
T ss_dssp EEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSS--EEEEEEECSSCEEEEEEESSSCTTCCCE
T ss_pred EEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCC--EEEEEecCCCCceEEEEECCCCCCCcee
Confidence 66655554 3688888877642 2222222 2234556776532 2333332 34578889998762 22
Q ss_pred eee-eCCCCCeEEEEEecCCCeEEEEeeCC
Q 013274 184 QTL-SGHRDGIMTVEWSTSSEWILVTGGCD 212 (446)
Q Consensus 184 ~~l-~~h~~~v~sv~~s~~~~~~l~S~s~D 212 (446)
..+ .+..+...++.|.. ++.+++.+..+
T Consensus 312 ~~l~~~~~~~~~s~~~~~-g~~l~~~t~~~ 340 (751)
T 2xe4_A 312 EIVRPREKGVRYDVQMHG-TSHLVILTNEG 340 (751)
T ss_dssp EESSCCCTTCCEEEEEET-TTEEEEEECTT
T ss_pred EEeecCCCCceEEEeeee-CCEEEEEeCCC
Confidence 333 34455566666554 45555555544
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.49 E-value=0.61 Score=44.23 Aligned_cols=220 Identities=8% Similarity=-0.008 Sum_probs=119.6
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCe----eeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR----VVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS 179 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~ 179 (446)
.+..+.+.+.++.++.+-...+.|+.++++... ...... .......+++... +..++.+-...+.|.+.|++.
T Consensus 113 ~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~--~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 113 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI--HSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEECTTT
T ss_pred cceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec--CCceEEEECCCCeEEEEeCCC
Confidence 455677776566666666677889999987521 122111 1123344555432 345666666778899999887
Q ss_pred CceeeeeeCCCCCeEEEEEecCCCeEEEEeeC-CCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCC
Q 013274 180 GAISQTLSGHRDGIMTVEWSTSSEWILVTGGC-DGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQN 258 (446)
Q Consensus 180 ~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~-Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (446)
......+...-.....|++.|.+.++++|-.. .+.|...++........+
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~----------------------------- 241 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLV----------------------------- 241 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEE-----------------------------
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEE-----------------------------
Confidence 65544444444557899999877766665432 356666665421100000
Q ss_pred CCcCCCCccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEE-EEeecCCcEEEEe
Q 013274 259 SSVKPRAPQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYL-LSAGSDSRIRLWD 337 (446)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l-~sgs~D~~i~lWd 337 (446)
.......+.|++++++..| ++-+...+|...|
T Consensus 242 -----------------------------------------------~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d 274 (400)
T 3p5b_L 242 -----------------------------------------------TENIQWPNGITLDLLSGRLYWVDSKLHSISSID 274 (400)
T ss_dssp -----------------------------------------------CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred -----------------------------------------------ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEe
Confidence 0001235779999766544 5556678899999
Q ss_pred cCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEEEeecCceEEEecccccceEEEEEc
Q 013274 338 VESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAFDIWSGKTCLTFRGHYEYVNCCCFS 405 (446)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~l~gH~~~v~~~~fS 405 (446)
+........ . ........+..++.. ...++++. ....+..++..+++....+........++++.
T Consensus 275 ~dG~~~~~~-~-~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~ 340 (400)
T 3p5b_L 275 VNGGNRKTI-L-EDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 340 (400)
T ss_dssp TTSCCCEEE-E-ECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEE
T ss_pred CCCCccEEE-E-eCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 875432111 1 100112234444442 23333333 23467777777787766666555555555443
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.39 E-value=0.57 Score=42.86 Aligned_cols=221 Identities=7% Similarity=0.024 Sum_probs=120.8
Q ss_pred CCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee-eeeeCCCCCeEEEEEecC
Q 013274 125 DHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS-QTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~-~~l~~h~~~v~sv~~s~~ 201 (446)
...|+..|++........... .....+.+.+ .+..++.+-...+.|+.++++.+... ..+...-.....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~ 89 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL 89 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcC
Confidence 357888888765311111111 1233344443 23456666666788888988776422 222222234567888876
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
+..++++-...+.|.+.++..... +.+-
T Consensus 90 ~g~ly~~d~~~~~I~~~~~dG~~~-~~l~--------------------------------------------------- 117 (318)
T 3sov_A 90 GEKLYWTDSETNRIEVSNLDGSLR-KVLF--------------------------------------------------- 117 (318)
T ss_dssp TTEEEEEETTTTEEEEEETTSCSC-EEEE---------------------------------------------------
T ss_pred CCeEEEEECCCCEEEEEECCCCcE-EEEE---------------------------------------------------
Confidence 666667766677888888653210 0000
Q ss_pred ceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE-EEEe-ecCCcEEEEecCcCceeeeeeeEEEeecCCCe
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY-LLSA-GSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~-l~sg-s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 359 (446)
.........+++.|.+.+ +.+- +..+.|...++........ . ......+.
T Consensus 118 ------------------------~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~-~---~~~l~~Pn 169 (318)
T 3sov_A 118 ------------------------WQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFII-I---NSEIYWPN 169 (318)
T ss_dssp ------------------------CSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEE-E---CSSCSCEE
T ss_pred ------------------------eCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEE-E---ECCCCCcc
Confidence 000122467888876444 4443 2356777777764221111 1 01123456
Q ss_pred EEEEcCCCcEEEEeCC--CceEEEEeecCceEEE-ecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCCC
Q 013274 360 QLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLT-FRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~-l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~~ 429 (446)
-+++.++...++.+.. ..+..+++. +...+. +.+.......+++. .+..+++-...+.|...++.++.
T Consensus 170 glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~~P~glav~-~~~lywtd~~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 170 GLTLDYEEQKLYWADAKLNFIHKSNLD-GTNRQAVVKGSLPHPFALTLF-EDILYWTDWSTHSILACNKYTGE 240 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEECSCCSCEEEEEEE-TTEEEEEETTTTEEEEEETTTCC
T ss_pred EEEEeccCCEEEEEECCCCEEEEEcCC-CCceEEEecCCCCCceEEEEe-CCEEEEEecCCCeEEEEECCCCC
Confidence 6888876666665533 456677764 333232 33345667788885 34566676677888888885443
No 283
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.23 E-value=0.035 Score=57.13 Aligned_cols=96 Identities=9% Similarity=-0.014 Sum_probs=50.2
Q ss_pred CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCC----CceeeeeeCCCCCeEEEEEec
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIAS----GAISQTLSGHRDGIMTVEWST 200 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~----~~~~~~l~~h~~~v~sv~~s~ 200 (446)
.+.|+..++.................+++.+. ...++.+-...+.|+.+++++ ......+.........|++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~--~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETT--TTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccc--cCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 35777778776554333222223334444432 234555545567899998875 222222222222345667765
Q ss_pred CCCeEEEEeeCCCcEEEEEccC
Q 013274 201 SSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 201 ~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
.+..++++-...+.|.+.++..
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg 484 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKG 484 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSS
T ss_pred eCCcEEEEeccCCeEEEEecCC
Confidence 5555556655667788777653
No 284
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.21 E-value=0.86 Score=43.16 Aligned_cols=220 Identities=8% Similarity=-0.020 Sum_probs=124.4
Q ss_pred CCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC----ceeeeeeCCCCCeEEEEEec
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG----AISQTLSGHRDGIMTVEWST 200 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~----~~~~~l~~h~~~v~sv~~s~ 200 (446)
...|+.-++.................+++.+. +..++.+-...+.|+.++++.. .....+.........+++.+
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~--~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~ 168 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 168 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETT--TTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEET
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeec--cCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEe
Confidence 46889889887654444443445556666543 3345666566778888888752 22233333445567888887
Q ss_pred CCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeecc
Q 013274 201 SSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSS 280 (446)
Q Consensus 201 ~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (446)
.+..++++-...+.|.+.|+........+.
T Consensus 169 ~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~-------------------------------------------------- 198 (400)
T 3p5b_L 169 IHSNIYWTDSVLGTVSVADTKGVKRKTLFR-------------------------------------------------- 198 (400)
T ss_dssp TTTEEEEEETTTTEEEEECTTTCSEEEEEE--------------------------------------------------
T ss_pred cCCceEEEECCCCeEEEEeCCCCceEEEEe--------------------------------------------------
Confidence 556666776667778877765321100000
Q ss_pred cceeecCCccccccCCCcccccccccccccCeEEEEEccCCCE-EEEeec-CCcEEEEecCcCceeeeeeeEEEeecCCC
Q 013274 281 VGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMY-LLSAGS-DSRIRLWDVESGRNTLVNFETVRLQTSKP 358 (446)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~-l~sgs~-D~~i~lWd~~~~~~~~~~~~~~~~~~~~~ 358 (446)
........|+++|.+.+ +.|-.. .+.|...++........ . ......+
T Consensus 199 --------------------------~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~-~---~~~l~~P 248 (400)
T 3p5b_L 199 --------------------------ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL-V---TENIQWP 248 (400)
T ss_dssp --------------------------CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE-E---CSSCSCE
T ss_pred --------------------------CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE-E---ECCCCce
Confidence 00112577889885544 444422 36788888765322111 1 1112345
Q ss_pred eEEEEcCCCcEEEEeCC--CceEEEEeecCceEEEe-c--ccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 359 IQLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTF-R--GHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 359 ~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l-~--gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
.-+++.++...++++.. ..+..+++. +....++ . +.......|++ ..+..+++-...+.|..++..++
T Consensus 249 ~glavd~~~~~lY~aD~~~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V~~~~~~~G 321 (400)
T 3p5b_L 249 NGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAIFSANRLTG 321 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETT-SCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSEEEEESSSC
T ss_pred EEEEEEeCCCEEEEEECCCCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeEEEEEcCCC
Confidence 66888877766666533 456777764 3333333 2 23455677777 34556667777788888885444
No 285
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.08 E-value=0.82 Score=41.69 Aligned_cols=106 Identities=14% Similarity=0.252 Sum_probs=67.3
Q ss_pred EEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeC
Q 013274 110 IWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSG 188 (446)
Q Consensus 110 ~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~ 188 (446)
.-+| ..+.+|-=+ ..+++++|+++.+.+..+.++..+..=.|.. .+..-|++ +..|+-|+++.. .+.+.+..
T Consensus 73 IMnP-~~~ViALra-g~~LQiFnletK~klks~~~~e~VvfWkWis--~~~L~lVT---~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 73 IMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWIS--LNTVALVT---DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EECS-SSSEEEEEE-TTEEEEEETTTTEEEEEEECSSCEEEEEECS--SSEEEEEE---SSEEEEEESSTTCCCEEEEEC
T ss_pred eeCC-CccEEEEec-CCeEEEechHHhhhhcceecCCccEEEEecC--CCeEEEEc---CCcEEEEcccCCCCCceeeec
Confidence 3454 445555443 5799999999999999988876653323322 12122333 457999999754 45556655
Q ss_pred C----CCCeEEEEEecCCCeEEEEee------CCCcEEEEEccC
Q 013274 189 H----RDGIMTVEWSTSSEWILVTGG------CDGAIRFWDIRR 222 (446)
Q Consensus 189 h----~~~v~sv~~s~~~~~~l~S~s------~Dg~I~iWd~~~ 222 (446)
| ...|..-..+++.+|+++.|= -.|.|.||....
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 189 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 189 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc
Confidence 5 345666677889999877764 235666776543
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.06 E-value=1.7 Score=45.16 Aligned_cols=219 Identities=9% Similarity=-0.030 Sum_probs=119.7
Q ss_pred CCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCC----ceeeeeeCCCCCeEEEEEe
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASG----AISQTLSGHRDGIMTVEWS 199 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~----~~~~~l~~h~~~v~sv~~s 199 (446)
....|+..++.................+++... ...++.+-...+.|+.++++.. .....+...-.....|++.
T Consensus 402 n~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~--~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD 479 (791)
T 3m0c_C 402 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVA--SNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVD 479 (791)
T ss_dssp CBSSEEEECTTSCCCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEE
T ss_pred cccceeEeeccCCcceeeecCCCceEEEeeccc--CCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeee
Confidence 345688888876554433333344555555542 3356666666778888888753 2233333344556788888
Q ss_pred cCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeec
Q 013274 200 TSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQS 279 (446)
Q Consensus 200 ~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (446)
+.++.++++-...+.|.+.++..... +.+-
T Consensus 480 ~~~~~LY~tD~~~~~I~v~~ldG~~~-~~l~------------------------------------------------- 509 (791)
T 3m0c_C 480 WIHSNIYWTDSVLGTVSVADTKGVKR-KTLF------------------------------------------------- 509 (791)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSSSE-EEEE-------------------------------------------------
T ss_pred ecCCcEEEEecCCCeEEEEeCCCCeE-EEEE-------------------------------------------------
Confidence 77777777877778888888753211 1100
Q ss_pred ccceeecCCccccccCCCcccccccccccccCeEEEEEccCCC-EEEEeecC-CcEEEEecCcCceeeeeeeEEEeecCC
Q 013274 280 SVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGM-YLLSAGSD-SRIRLWDVESGRNTLVNFETVRLQTSK 357 (446)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~-~l~sgs~D-~~i~lWd~~~~~~~~~~~~~~~~~~~~ 357 (446)
.........|+++|.+. +++|-... .+|...++...... ..+ ......
T Consensus 510 --------------------------~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-~lv---~~~l~~ 559 (791)
T 3m0c_C 510 --------------------------RENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SLV---TENIQW 559 (791)
T ss_dssp --------------------------ECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EEE---CSSCSC
T ss_pred --------------------------eCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-EEE---eCCCCC
Confidence 00012267788988744 44444333 67888887653221 111 111234
Q ss_pred CeEEEEcCCCcEEEEeCC--CceEEEEeecCceEEEe-cc--cccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 358 PIQLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTF-RG--HYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l-~g--H~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
+.-+++.+....++++.. ..|..+++. |.....+ .+ .......|++.. +++++|-...+.|...+..
T Consensus 560 P~GLavD~~~~~LYwaD~~~~~I~~~d~d-G~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 560 PNGITLDLLSGRLYWVDSKLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred ceEEEEecCCCeEEEEeCCCCcEEEEecC-CCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 666788866666666533 356666663 3333333 22 233456666643 3455566666777766643
No 287
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.05 E-value=1.5 Score=44.35 Aligned_cols=220 Identities=7% Similarity=-0.011 Sum_probs=128.2
Q ss_pred CCCeEEEEECCCCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~ 201 (446)
....|+.-|+++..........+ ....+++.+. +..++.+-..++.|+.++++.......+.........+++.+.
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~--~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~ 90 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVT--DNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWL 90 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECC--CCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeC
Confidence 34678888887655433333332 3455666543 3456666667788998988765443333332345667888876
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccccccCCCceeeccc
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQKRSANGNGVRQSSV 281 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (446)
++.++++-...+.|.+.++..... +.+-
T Consensus 91 ~~~LY~tD~~~~~I~v~~~dG~~~-~~l~--------------------------------------------------- 118 (628)
T 4a0p_A 91 GKNLYWADTGTNRIEVSKLDGQHR-QVLV--------------------------------------------------- 118 (628)
T ss_dssp TTEEEEEETTTTEEEEEETTSTTC-EEEE---------------------------------------------------
T ss_pred CCEEEEEECCCCEEEEEecCCCcE-EEEE---------------------------------------------------
Confidence 666667766677788777653210 0000
Q ss_pred ceeecCCccccccCCCcccccccccccccCeEEEEEccC-CCEEEEe-ecCCcEEEEecCcCceeeeeeeEEEeecCCCe
Q 013274 282 GRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTED-GMYLLSA-GSDSRIRLWDVESGRNTLVNFETVRLQTSKPI 359 (446)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~d-g~~l~sg-s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~ 359 (446)
. ........|++.|. |.++.|- +...+|...++....... .+ .....+.
T Consensus 119 -----~-------------------~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~-l~----~~~~~P~ 169 (628)
T 4a0p_A 119 -----W-------------------KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT-LV----PNVGRAN 169 (628)
T ss_dssp -----C-------------------SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-EE----CSCSSEE
T ss_pred -----e-------------------CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE-EE----CCCCCcc
Confidence 0 00112577889884 5545554 235677777776533211 11 1234566
Q ss_pred EEEEcCCCcEEEEeCC--CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 360 QLATTQDPAVVFVPCM--TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 360 ~~~~~~~~~~~~~~~~--~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
-+++.++...++++.. ..+..+++..... ..+.........+++.. +...+|-...+.|...+..++
T Consensus 170 GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg 238 (628)
T 4a0p_A 170 GLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSG 238 (628)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTC
T ss_pred eEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCC
Confidence 7888887666666533 4566677643322 44555556677888865 566667766788888876544
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.04 E-value=0.37 Score=46.29 Aligned_cols=112 Identities=11% Similarity=0.041 Sum_probs=63.2
Q ss_pred eEEEEEccCCCE-EEEeecCC----cEEEEecCcCceeeeeeeEEEeecCCCeEEEEcC-CCcEEEEeC-CCceEEEEee
Q 013274 312 VTGLKVTEDGMY-LLSAGSDS----RIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQ-DPAVVFVPC-MTAVKAFDIW 384 (446)
Q Consensus 312 v~~l~fs~dg~~-l~sgs~D~----~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~d~~ 384 (446)
...|+|+++|++ +++...++ .+.+.+. .+..... ..+. ....+..+++.+ ++.+++... ...+..++..
T Consensus 181 P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~--~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVI--TELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp EEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSE--EEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred cceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeee--eeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 678999999994 45444332 2333332 2221100 0111 234556677888 555554443 3466677765
Q ss_pred cCceEEEec-ccccceEEEEEcCCCC-EEEEeeCCCcEEEeCCCC
Q 013274 385 SGKTCLTFR-GHYEYVNCCCFSSQDQ-ELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 385 ~~~~~~~l~-gH~~~v~~~~fSpd~~-~lvtgs~D~~v~vW~~~~ 427 (446)
.+.....+. +-......++|+|+++ ++++-...+.|.+++++.
T Consensus 257 ~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 257 TQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 544322111 1124578999999999 556666788899987663
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.00 E-value=1.8 Score=44.90 Aligned_cols=291 Identities=9% Similarity=0.023 Sum_probs=151.8
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEE-eccccccCccccEeEEEEeecCCcEEEEE
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFV-VDKQHEHGHKYAISSAIWYPVDTGLFVTG 122 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~-~~~~~~~gh~~~V~~~~~~~~~~~~l~s~ 122 (446)
..|++|..+. ++. |..|...+-|.++|.++..... +....-... .......-....|.++..-+ ++ .|-.|
T Consensus 258 ~~i~~i~~d~-~g~-lWigt~~~Gl~~~~~~~~~~~~----~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~-~g-~lWig 329 (781)
T 3v9f_A 258 SYIFSIKQLK-DNK-LWIATELNGIMILDLQQNQFLL----PEQIRFEFIREGDNNYSLSNASARYIFQDS-FN-NIWIG 329 (781)
T ss_dssp CCEEEEEECT-TSE-EEEEESSSCEEEEETTCC-------------CEEECBCSSTTSBSSSCEEEEEECS-SC-CEEEE
T ss_pred ceEEEEEECC-CCC-EEEEeCCCCeEEECCCCCeeee----eeccccccccCCCCCCCCCCCeEEEEEEeC-CC-CEEEE
Confidence 4688888864 454 5566665678889876543210 000000000 00000011234576655433 34 46667
Q ss_pred eCCCeEEEEECCCCeeeEEEec-----------CCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeee---eC
Q 013274 123 SYDHYVKVWDTNCTRVVMNFKM-----------PGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTL---SG 188 (446)
Q Consensus 123 s~D~~i~iWd~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l---~~ 188 (446)
..++-|..++........ +.. ...+.++.... .+. |-.|+.++-|..+|..++...... ..
T Consensus 330 t~~~Gl~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~v~~i~~d~--~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~~~ 404 (781)
T 3v9f_A 330 TWGGGINFISNAPPTFHT-WSYSPTQMNESSLSNKVVSSVCDDG--QGK--LWIGTDGGGINVFENGKRVAIYNKENREL 404 (781)
T ss_dssp EBSSCEEEECSSCCSCEE-EC----CCCSSCCSSSCEEEEEECT--TSC--EEEEEBSSCEEEEETTEEEEECC-----C
T ss_pred ecCCeEEEeCCCCCccee-eccCccccccCCCCCcceEEEEEcC--CCC--EEEEeCCCcEEEEECCCCeEEEccCCCCC
Confidence 777789999877554322 211 12244443332 222 344555566888998765432211 12
Q ss_pred CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCCCccc
Q 013274 189 HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPRAPQK 268 (446)
Q Consensus 189 h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (446)
....|.++...+++. + ..|+.++-+..+|.+++.. ..+..
T Consensus 405 ~~~~v~~i~~d~~g~-l-Wigt~~~Gl~~~~~~~~~~-~~~~~------------------------------------- 444 (781)
T 3v9f_A 405 LSNSVLCSLKDSEGN-L-WFGTYLGNISYYNTRLKKF-QIIEL------------------------------------- 444 (781)
T ss_dssp CCSBEEEEEECTTSC-E-EEEETTEEEEEECSSSCEE-EECCS-------------------------------------
T ss_pred CCcceEEEEECCCCC-E-EEEeccCCEEEEcCCCCcE-EEecc-------------------------------------
Confidence 346788888876665 3 4466666788888655421 11000
Q ss_pred cccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeee
Q 013274 269 RSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNF 348 (446)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~ 348 (446)
. ......|.++...++|...+ |+. +-|..+|..+++... +
T Consensus 445 ---------------------------~---------~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~--~ 484 (781)
T 3v9f_A 445 ---------------------------E---------KNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIH--H 484 (781)
T ss_dssp ---------------------------T---------TTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCE--E
T ss_pred ---------------------------C---------CCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEe--c
Confidence 0 00123488888888887655 444 458889987754221 1
Q ss_pred eEEE---eecCCCeEEEEcCCCcEEEEeCCCceEEEEeecCceEEEecc----cccceEEEEEcCCCCEEEEeeCCCcEE
Q 013274 349 ETVR---LQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTCLTFRG----HYEYVNCCCFSSQDQELYTGGNDRQIL 421 (446)
Q Consensus 349 ~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~l~g----H~~~v~~~~fSpd~~~lvtgs~D~~v~ 421 (446)
.... ........+...+++.+.+......+..++..+++. ..+.. ....|.++...++|++.++.. +|.|.
T Consensus 485 ~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~ 562 (781)
T 3v9f_A 485 YDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVC 562 (781)
T ss_dssp ECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEE
T ss_pred ccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceE
Confidence 1000 001122334455556555544435666666544432 33321 245789999999998776554 66658
Q ss_pred EeCCCCCC
Q 013274 422 VWCPSRHI 429 (446)
Q Consensus 422 vW~~~~~~ 429 (446)
.|++.+..
T Consensus 563 ~~d~~~~~ 570 (781)
T 3v9f_A 563 FPSARNFD 570 (781)
T ss_dssp ESCTTTCC
T ss_pred EECCCCCc
Confidence 88887654
No 290
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=95.96 E-value=0.78 Score=40.41 Aligned_cols=118 Identities=12% Similarity=0.135 Sum_probs=75.9
Q ss_pred ccCccccEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCC--ceEEeeeccCCCCceEEEEeeCCCcEEEEe
Q 013274 99 EHGHKYAISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG--KVYRTAMSPLAASHMLIAAGTEDVQVRLCD 176 (446)
Q Consensus 99 ~~gh~~~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~lasgs~d~~v~vwd 176 (446)
..|-...+..+.+.|.++.+++....++.|...|+. ++.++.+...+ ....+++.. +..++++.-.++.+.+++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~---~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIG---DNQFVISDERDYAIYVIS 97 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECS---TTEEEEEETTTTEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeC---CCEEEEEECCCCcEEEEE
Confidence 345445788888887555566677888999999998 88888887654 345555543 233445544567888888
Q ss_pred CCCCce---eeeee------CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 177 IASGAI---SQTLS------GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 177 ~~~~~~---~~~l~------~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
+..... +.... ..+.....++|+|.++.+++ +.+.....+|.++
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~v-a~E~~p~~i~~~~ 150 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWF-FKEKNPIEVYKVN 150 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEE-EEESSSEEEEEEE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEE-EECcCCceEEEEc
Confidence 765432 12221 23455789999999876544 5554455666543
No 291
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.75 E-value=1.1 Score=40.98 Aligned_cols=112 Identities=10% Similarity=0.086 Sum_probs=66.0
Q ss_pred EEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCC---------ceEEeeeccCCCCceEEEEee-----------
Q 013274 108 SAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPG---------KVYRTAMSPLAASHMLIAAGT----------- 167 (446)
Q Consensus 108 ~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~lasgs----------- 167 (446)
+..|.+.++.++++.-+.++|..||...+..... ..++ +...+.+....+...++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3466654555555555899999999976544332 3322 123344410022344555432
Q ss_pred --CCCcEEEEeCC---CCceeeeee--CCC-----------CCeEEEEEecCCCeEEEEeeCC-CcEEEEEcc
Q 013274 168 --EDVQVRLCDIA---SGAISQTLS--GHR-----------DGIMTVEWSTSSEWILVTGGCD-GAIRFWDIR 221 (446)
Q Consensus 168 --~d~~v~vwd~~---~~~~~~~l~--~h~-----------~~v~sv~~s~~~~~~l~S~s~D-g~I~iWd~~ 221 (446)
.+..|..+|+. +++...... +.. .....++..++|+ ..++++.- +.|...+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSAD 167 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTT
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCC
Confidence 25779999999 777654332 211 2477889999887 46788876 776666543
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.65 E-value=1.6 Score=41.74 Aligned_cols=114 Identities=12% Similarity=0.100 Sum_probs=71.5
Q ss_pred eEEEEEcc-CCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC--CceEEEEee--cC
Q 013274 312 VTGLKVTE-DGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM--TAVKAFDIW--SG 386 (446)
Q Consensus 312 v~~l~fs~-dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~d~~--~~ 386 (446)
...++++| +|.++++-..+++|+.+|..++......+ .. ........+++++++..++++.. ..+..++.. ++
T Consensus 230 P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~-~~-~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~ 307 (433)
T 4hw6_A 230 AKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEV-MM-DTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETG 307 (433)
T ss_dssp BCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEE-EC-SCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTC
T ss_pred CCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEe-cc-CCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCc
Confidence 34567888 78777777778899999987654311111 00 01122335889999886655533 456666654 23
Q ss_pred ce--EEEeccc---------------ccceEEEEE---------cCCCCEEEEeeCCCcEEEeCCCC
Q 013274 387 KT--CLTFRGH---------------YEYVNCCCF---------SSQDQELYTGGNDRQILVWCPSR 427 (446)
Q Consensus 387 ~~--~~~l~gH---------------~~~v~~~~f---------Spd~~~lvtgs~D~~v~vW~~~~ 427 (446)
.. ...+.+. -.....++| .+++.+.++-...+.|+.++++.
T Consensus 308 ~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~G 374 (433)
T 4hw6_A 308 KLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPEG 374 (433)
T ss_dssp CBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTTS
T ss_pred ccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCCC
Confidence 21 1233322 234678999 78888888888889999999865
No 293
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.29 E-value=1.8 Score=39.95 Aligned_cols=112 Identities=10% Similarity=0.136 Sum_probs=73.5
Q ss_pred CCc-EEEEEeCCCeEEEEECC-------CCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC-----CCc
Q 013274 115 DTG-LFVTGSYDHYVKVWDTN-------CTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA-----SGA 181 (446)
Q Consensus 115 ~~~-~l~s~s~D~~i~iWd~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~-----~~~ 181 (446)
.+. +++....++.+..|++. +.+.++++.+.+....+...+. ...|..+-.+.-|..+|.+ ++.
T Consensus 141 ~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~---~g~Lyv~eEd~GIw~~da~p~~~~~~~ 217 (355)
T 3amr_A 141 TGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDE---YGRLYIAEEDEAIWKFSAEPDGGSNGT 217 (355)
T ss_dssp TCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETT---TTEEEEEETTTEEEEEECSTTSCSCCE
T ss_pred CCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCC---CCeEEEecccceEEEEeCCcCCCCCce
Confidence 343 67788888999999982 3466788888877766555432 2356777777667777755 233
Q ss_pred eeeeee-CC-CCCeEEEEE--ecCCC-eEEEEeeCCCcEEEEEcc-CCceeEEe
Q 013274 182 ISQTLS-GH-RDGIMTVEW--STSSE-WILVTGGCDGAIRFWDIR-RAGCFRVL 229 (446)
Q Consensus 182 ~~~~l~-~h-~~~v~sv~~--s~~~~-~~l~S~s~Dg~I~iWd~~-~~~~~~~~ 229 (446)
.+..+. +| ...+..+++ .++++ ++|+|+-.+++..+||.. +...+..|
T Consensus 218 ~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 218 VIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEE
Confidence 444332 22 246777777 44455 777777788999999986 44444444
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.24 E-value=2.9 Score=42.08 Aligned_cols=102 Identities=13% Similarity=0.046 Sum_probs=59.3
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCcee
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAIS 183 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~ 183 (446)
+..+.+.+.++.++.+=...+.|..++++........... .....+++... +..++.+-...+.|.+.+++.....
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~--~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWL--GEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSCE
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEec--CCEEEEEeCCCCEEEEEECCCCCEE
Confidence 3456666655655556555688988988754321111111 23455666543 3456666677889999999765433
Q ss_pred eeeeCCCCCeEEEEEecCCCeEEEEe
Q 013274 184 QTLSGHRDGIMTVEWSTSSEWILVTG 209 (446)
Q Consensus 184 ~~l~~h~~~v~sv~~s~~~~~~l~S~ 209 (446)
..+...-.....|++.|.+.++++|-
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD 145 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTD 145 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEE
T ss_pred EEEeCCCCCCceEEEecCCCeEEEec
Confidence 33334445567889988766666653
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=94.99 E-value=2.1 Score=39.12 Aligned_cols=163 Identities=15% Similarity=0.177 Sum_probs=93.9
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccC-ccccEeEEEEe--ecCCcEEE
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHG-HKYAISSAIWY--PVDTGLFV 120 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-h~~~V~~~~~~--~~~~~~l~ 120 (446)
..=.+++|++.++.++++.-..++|..||...+...+ + .+......| ....+..+.+. .+++.+++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~----------~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~v 81 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN----------V-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFA 81 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEE----------E-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE----------E-ecCCccccCCCcceeeEEEEeccCCCCcEEE
Confidence 3345788987677777777789999999986432110 0 000000001 01123455552 23566666
Q ss_pred EEe-------------CCCeEEEEECC---CCeeeEEEecC----C----------ceEEeeeccCCCCceEEEEeeCC-
Q 013274 121 TGS-------------YDHYVKVWDTN---CTRVVMNFKMP----G----------KVYRTAMSPLAASHMLIAAGTED- 169 (446)
Q Consensus 121 s~s-------------~D~~i~iWd~~---~~~~~~~~~~~----~----------~~~~~~~~~~~~~~~~lasgs~d- 169 (446)
... .+..|..+|+. +++.+....++ + ....++..+. +...++++..
T Consensus 82 v~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~---GnaYVt~s~~~ 158 (334)
T 2p9w_A 82 VMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRD---GNSYVAFALGM 158 (334)
T ss_dssp EEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTT---SCEEEEEEESS
T ss_pred EEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCC---CCEEEeCCCCC
Confidence 433 26789999999 78777655542 1 2344444443 3355556666
Q ss_pred CcEEEEeCCCCcee-eeeeC----CCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 170 VQVRLCDIASGAIS-QTLSG----HRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 170 ~~v~vwd~~~~~~~-~~l~~----h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
+.|..++.+..... ..+.. .......|++.|++..+++.-+ .|.+..+|++
T Consensus 159 ~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~ 214 (334)
T 2p9w_A 159 PAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVS 214 (334)
T ss_dssp CEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECS
T ss_pred CeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCC
Confidence 66776666544221 11111 1223568999999987665555 8999999986
No 296
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=94.63 E-value=1.7 Score=42.34 Aligned_cols=159 Identities=10% Similarity=0.018 Sum_probs=87.7
Q ss_pred eeEEEeecC-CCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEE-------eecCCc
Q 013274 46 INSLQVDLT-EERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIW-------YPVDTG 117 (446)
Q Consensus 46 v~~l~~s~~-~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~-------~~~~~~ 117 (446)
-..|+|+|. ++++.++-...+.|++.|++++... .+.. ...+.......+.+ .+ +++
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-------------~l~~-~~~~~~~~p~~ia~~~~~~~~d~-~G~ 205 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-------------SPLN-INTIPTNRIRSIAFNKKIEGYAD-EAE 205 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-------------EEEC-CTTSSCSBEEEEEECCCBTTTBC-TTC
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-------------EEEc-cCccccCCCcEEEEeecccccCC-CCC
Confidence 457899873 4555555555567888888764321 0000 00111223455666 44 676
Q ss_pred EEEEEeCCC-------eEEEEECCC-Ceee-----EEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCC------
Q 013274 118 LFVTGSYDH-------YVKVWDTNC-TRVV-----MNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIA------ 178 (446)
Q Consensus 118 ~l~s~s~D~-------~i~iWd~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~------ 178 (446)
.|+.+.+.+ .|.+.+... +... ..+..-.+...+++.+. +..++++-..++.|..+|++
T Consensus 206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~--~g~LYvtd~~~g~V~r~d~~~~~~~~ 283 (496)
T 3kya_A 206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPI--NGELYFNSYEKGQVFRLDLVDYFKTI 283 (496)
T ss_dssp EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTT--TCCEEEEETTTTEEEEECHHHHHHHH
T ss_pred EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCC--CCeEEEEECCCCEEEEEecccccccc
Confidence 566665543 255665333 1211 11111112234455543 34567777778889999997
Q ss_pred -CCce-----------eeee-e-CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 179 -SGAI-----------SQTL-S-GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 179 -~~~~-----------~~~l-~-~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
++.. ...+ . +....-..|+|+|+++.++++=+....|+.+|..
T Consensus 284 ~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 284 KNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp HTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 5543 1122 1 1223347899999998656676777889887653
No 297
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.13 E-value=4.1 Score=38.74 Aligned_cols=106 Identities=18% Similarity=0.293 Sum_probs=67.0
Q ss_pred EEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEecCCce-EEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeee
Q 013274 109 AIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTL 186 (446)
Q Consensus 109 ~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l 186 (446)
+.-+| ..+.+|-=+ ..+++|+|+++.+.+..+.++..+ +..-+++ ..|+--+ +..|+-|+++.. .+.+.+
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnle~K~klks~~~~e~VvfWkWis~-----~~l~lVT-~taVyHWsi~~~s~P~kvF 142 (494)
T 1bpo_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL-----NTVALVT-DNAVYHWSMEGESQPVKMF 142 (494)
T ss_dssp EEECS-SSSCEEEEE-TTEEEEEETTTTEEEEEEECSSCCCEEEEEET-----TEEEEEC-SSEEEEEESSSSCCCEEEE
T ss_pred eeeCC-CCcEEEEec-CCeEEEEchHHhhhhcceecCCCceEEEecCC-----CeEEEEc-CCeeEEecccCCCCchhhe
Confidence 34444 334444333 579999999999999888877654 3333332 1233322 568999999754 455666
Q ss_pred eCC----CCCeEEEEEecCCCeEEEEee------CCCcEEEEEccC
Q 013274 187 SGH----RDGIMTVEWSTSSEWILVTGG------CDGAIRFWDIRR 222 (446)
Q Consensus 187 ~~h----~~~v~sv~~s~~~~~~l~S~s------~Dg~I~iWd~~~ 222 (446)
..| ...|..-..+++.+|+++.|= -.|.|.+|....
T Consensus 143 dR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er 188 (494)
T 1bpo_A 143 DRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR 188 (494)
T ss_dssp ECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT
T ss_pred ecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc
Confidence 555 345666677889999877663 235666776543
No 298
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.06 E-value=3.1 Score=37.11 Aligned_cols=103 Identities=18% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCCEEEEeecC-----CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeC------CCceEEEEeecCc-
Q 013274 320 DGMYLLSAGSD-----SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPC------MTAVKAFDIWSGK- 387 (446)
Q Consensus 320 dg~~l~sgs~D-----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~~~~~- 387 (446)
+++.++.|+.+ ..+.+||+.+.+-... ... ........+...++.+++.++ ...+.++|+.+.+
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~--~~~--p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 234 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV--TPM--ATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSW 234 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE--CCC--SSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeC--CCC--CcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcE
Confidence 56666667654 4588889887643221 111 011111112222444444443 2356777775543
Q ss_pred -eEEEecccccceEEEEEcCCCCEEEEeeCC-----CcEEEeCCCCC
Q 013274 388 -TCLTFRGHYEYVNCCCFSSQDQELYTGGND-----RQILVWCPSRH 428 (446)
Q Consensus 388 -~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D-----~~v~vW~~~~~ 428 (446)
.+..+........++. -+++.++.|+.+ ..|.++++++.
T Consensus 235 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCC
Confidence 2222221111122233 378888888776 34677787654
No 299
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.69 E-value=3.9 Score=44.91 Aligned_cols=91 Identities=14% Similarity=0.291 Sum_probs=58.3
Q ss_pred CCeEEEEECCCCeeeEEEecCCce-EEeeeccCCCCceEEEEeeCCCcEEEEeCCCC-ceeeeeeCC----CCCeEEEEE
Q 013274 125 DHYVKVWDTNCTRVVMNFKMPGKV-YRTAMSPLAASHMLIAAGTEDVQVRLCDIASG-AISQTLSGH----RDGIMTVEW 198 (446)
Q Consensus 125 D~~i~iWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~-~~~~~l~~h----~~~v~sv~~ 198 (446)
.++++|+|+++.+.+..+.++..+ +..-+++ ...-+++ +..|+-|++... .+.+.+..| ...|..-..
T Consensus 85 g~~lQiFnl~~k~klks~~~~e~VvfWkWis~---~~l~lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~ 158 (1630)
T 1xi4_A 85 GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL---NTVALVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRT 158 (1630)
T ss_pred CCeEEEeehHHhhhhcccccCCCceEEEecCC---CeeEEEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeee
Confidence 579999999988888877776654 3222222 1112333 457999999754 344455444 455666677
Q ss_pred ecCCCeEEEEee------CCCcEEEEEcc
Q 013274 199 STSSEWILVTGG------CDGAIRFWDIR 221 (446)
Q Consensus 199 s~~~~~~l~S~s------~Dg~I~iWd~~ 221 (446)
+++.+|+++.|= -.|.|.+|...
T Consensus 159 d~~~kW~~l~gi~~~~~~v~G~mQLyS~e 187 (1630)
T 1xi4_A 159 DAKQKWLLLTGISAQQNRVVGAMQLYSVD 187 (1630)
T ss_pred CCCCCeEEEEeeccCCCcccceeeeeecc
Confidence 889999877653 34666666554
No 300
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=92.50 E-value=1.3 Score=41.17 Aligned_cols=111 Identities=19% Similarity=0.177 Sum_probs=63.8
Q ss_pred eEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEE---eecCCCeEEEEcCC---CcEEEEeCC-------Cce
Q 013274 312 VTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVR---LQTSKPIQLATTQD---PAVVFVPCM-------TAV 378 (446)
Q Consensus 312 v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~-------~~~ 378 (446)
...|+|.|||.++++ ..+++|++++ .++... +.... .....+.-+++.|+ ...+++... ..+
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~--~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v 107 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLST--YAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQV 107 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEE--EEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccE--eecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEE
Confidence 578999999997765 4569999998 332211 11111 01234566888887 444444322 455
Q ss_pred EEEEeecCc------eEEEec---ccccceEEEEEcCCCCEEEEeeCC-------------CcEEEeCCCC
Q 013274 379 KAFDIWSGK------TCLTFR---GHYEYVNCCCFSSQDQELYTGGND-------------RQILVWCPSR 427 (446)
Q Consensus 379 ~~~d~~~~~------~~~~l~---gH~~~v~~~~fSpd~~~lvtgs~D-------------~~v~vW~~~~ 427 (446)
..++...+. .+..+. +.......++|.|||.+.++.+.. +.|...++++
T Consensus 108 ~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG 178 (352)
T 2ism_A 108 VRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEG 178 (352)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTS
T ss_pred EEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCC
Confidence 666665331 122243 111123689999999887775431 4566667765
No 301
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=92.05 E-value=6.3 Score=35.14 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=57.2
Q ss_pred CCCEEEEeeCC----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC-----
Q 013274 55 EERYLLSGASD----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD----- 125 (446)
Q Consensus 55 ~~~~l~s~s~D----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D----- 125 (446)
++.+++.|+.+ ..+.+||+.+.+... +.. . .....+|.. +.. ++.+++.|+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~----~~~------~-p~~r~~~~~-----~~~--~~~iyv~GG~~~~~~~ 116 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYS----KLG------P-PTPRDSLAA-----CAA--EGKIYTSGGSEVGNSA 116 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEE----EEC------C-SSCCBSCEE-----EEE--TTEEEEECCBBTTBSC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEE----CCC------C-CccccceeE-----EEE--CCEEEEECCCCCCCcE
Confidence 46778888765 568888887654311 000 0 011123331 121 57788888876
Q ss_pred -CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeC---------CCcEEEEeCCCCce
Q 013274 126 -HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTE---------DVQVRLCDIASGAI 182 (446)
Q Consensus 126 -~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~---------d~~v~vwd~~~~~~ 182 (446)
..+.+||+.+.+....-.++... ...+.. +..+++.|+. -..+.+||+.+...
T Consensus 117 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W 181 (306)
T 3ii7_A 117 LYLFECYDTRTESWHTKPSMLTQRCSHGMVEA----NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETW 181 (306)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEECCEESCTTTCEECCCEEEEETTTTEE
T ss_pred eeeEEEEeCCCCceEeCCCCcCCcceeEEEEE----CCEEEEECCCCCCCCcccccceEEEeCCCCCeE
Confidence 56889999877654332222211 111111 2345555542 34588999988753
No 302
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.73 E-value=7.5 Score=35.30 Aligned_cols=156 Identities=13% Similarity=0.116 Sum_probs=81.9
Q ss_pred eeEeCCCccceeEEEeecCCCCEEEEeeCCCcEE-EEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeec
Q 013274 36 KEIVSPHKGSINSLQVDLTEERYLLSGASDSSVA-VYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPV 114 (446)
Q Consensus 36 ~~~~~~H~~~v~~l~~s~~~~~~l~s~s~Dg~i~-lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~ 114 (446)
..+..++.+.++++.+.+ ++.+++.+ .+|.+. -+|-. +... ..+ ..+....+..+.+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~G~~~~S~d~g-G~tW---------~~~-------~~~~~~~~~~~~~~~- 214 (327)
T 2xbg_A 155 QALVQEAIGVMRNLNRSP-SGEYVAVS-SRGSFYSTWEPG-QTAW---------EPH-------NRTTSRRLHNMGFTP- 214 (327)
T ss_dssp EEEECSCCCCEEEEEECT-TSCEEEEE-TTSSEEEEECTT-CSSC---------EEE-------ECCSSSCEEEEEECT-
T ss_pred EEeecCCCcceEEEEEcC-CCcEEEEE-CCCcEEEEeCCC-CCce---------eEC-------CCCCCCccceeEECC-
Confidence 344556677889999986 46766655 444433 33320 1110 000 012233455666554
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecC-----CceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeee--
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP-----GKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLS-- 187 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~-- 187 (446)
++. ++.++.++.+.+++.+.++.-..+..+ ..++.+.+.+ +..+++++. ++.| ++..+.|+--..+.
T Consensus 215 ~g~-~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~---~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~ 288 (327)
T 2xbg_A 215 DGR-LWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRT---PNEVWLAGG-AGAL-LCSQDGGQTWQQDVDV 288 (327)
T ss_dssp TSC-EEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESS---SSCEEEEES-TTCE-EEESSTTSSCEECGGG
T ss_pred CCC-EEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecC---CCEEEEEeC-CCeE-EEeCCCCcccEEcCcc
Confidence 454 445566788877753323322222211 1245555554 234555554 6666 45556665444443
Q ss_pred -CCCCCeEEEEEecCCCeEEEEeeCCCcEEEEE
Q 013274 188 -GHRDGIMTVEWSTSSEWILVTGGCDGAIRFWD 219 (446)
Q Consensus 188 -~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd 219 (446)
.+...+.+|.|.+++. ++.++.+|.|.-++
T Consensus 289 ~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 289 KKVPSNFYKILFFSPDQ--GFILGQKGILLRYV 319 (327)
T ss_dssp TTSSSCCCEEEEEETTE--EEEECSTTEEEEEC
T ss_pred CCCCCCeEEEEEECCCc--eEEEcCCceEEEEc
Confidence 2346788899975543 45667789877665
No 303
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=91.51 E-value=7.3 Score=34.73 Aligned_cols=99 Identities=9% Similarity=0.024 Sum_probs=49.4
Q ss_pred cEEEEEeC--CCeEEEEECCCCeeeEEEecCCc--eEEeeeccCCCCceEEEEeeCC----CcEEEEeCCCCceee--ee
Q 013274 117 GLFVTGSY--DHYVKVWDTNCTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGTED----VQVRLCDIASGAISQ--TL 186 (446)
Q Consensus 117 ~~l~s~s~--D~~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lasgs~d----~~v~vwd~~~~~~~~--~l 186 (446)
.+++.||. ...+.++|..+.+-...-.++.. ...++. .+..+++.|+.+ ..+.+||+.++.... .+
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~----~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVF----WDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEE----ETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECC
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEE----ECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCC
Confidence 34555554 36788999887764432222211 111111 133466666544 578899998875322 22
Q ss_pred eCCCCCeEEEEEecCCCeEEEEeeCC------CcEEEEEccC
Q 013274 187 SGHRDGIMTVEWSTSSEWILVTGGCD------GAIRFWDIRR 222 (446)
Q Consensus 187 ~~h~~~v~sv~~s~~~~~~l~S~s~D------g~I~iWd~~~ 222 (446)
......-.++.+ +++ +++.|+.+ ..+.+||+.+
T Consensus 89 p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~~~d~~~ 127 (306)
T 3ii7_A 89 PTPRDSLAACAA--EGK-IYTSGGSEVGNSALYLFECYDTRT 127 (306)
T ss_dssp SSCCBSCEEEEE--TTE-EEEECCBBTTBSCCCCEEEEETTT
T ss_pred CccccceeEEEE--CCE-EEEECCCCCCCcEeeeEEEEeCCC
Confidence 211112222222 443 55666654 3456666544
No 304
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=91.34 E-value=7 Score=34.22 Aligned_cols=168 Identities=13% Similarity=0.153 Sum_probs=97.3
Q ss_pred eeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeecccccccCCCcccccceeeccccccCCCCCcCCC
Q 013274 185 TLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQSQSQLGRRPPLLKRKVSISKSLSAGQNSSVKPR 264 (446)
Q Consensus 185 ~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (446)
.+.+-.+.+..++++|+++.+++....++.|...|+. ++.++.+.-
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l--------------------------------- 66 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPL--------------------------------- 66 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEEC---------------------------------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEec---------------------------------
Confidence 4556667899999999877666667778888888876 443332210
Q ss_pred CccccccCCCceeecccceeecCCccccccCCCcccccccccccccCeEEEEEccCCCEEEEeecCCcEEEEecCcCcee
Q 013274 265 APQKRSANGNGVRQSSVGRIPAKGSVRQRLHPGMLSSQDRATAHYGAVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNT 344 (446)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~ 344 (446)
. + ....-.|++.++|.++++.-.++.+.++++.....
T Consensus 67 ----------------------~-------------------g-~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~- 103 (255)
T 3qqz_A 67 ----------------------D-------------------F-VKDLETIEYIGDNQFVISDERDYAIYVISLTPNSE- 103 (255)
T ss_dssp ----------------------S-------------------S-CSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCC-
T ss_pred ----------------------C-------------------C-CCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCe-
Confidence 0 0 11245567778888877766677888888765432
Q ss_pred eeeeeEEEeec-----C-CCeEEEEcCCCcEEEEeCC-CceEEEEee---cCceEEEe-------cccccceEEEEEcCC
Q 013274 345 LVNFETVRLQT-----S-KPIQLATTQDPAVVFVPCM-TAVKAFDIW---SGKTCLTF-------RGHYEYVNCCCFSSQ 407 (446)
Q Consensus 345 ~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~~~~~-~~~~~~d~~---~~~~~~~l-------~gH~~~v~~~~fSpd 407 (446)
........+.. . .---+++.+....++++.. ....+|.+. ....+..+ ..+...+..++|.|.
T Consensus 104 i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~ 183 (255)
T 3qqz_A 104 VKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQ 183 (255)
T ss_dssp EEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETT
T ss_pred eeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCC
Confidence 11111111110 1 1134777777766666543 233455443 11111211 123446789999998
Q ss_pred CCE-EEEeeCCCcEEEeCCCCCC
Q 013274 408 DQE-LYTGGNDRQILVWCPSRHI 429 (446)
Q Consensus 408 ~~~-lvtgs~D~~v~vW~~~~~~ 429 (446)
... ++.....+.|.+.|+....
T Consensus 184 tg~lliLS~~s~~L~~~d~~g~~ 206 (255)
T 3qqz_A 184 KNTLLVLSHESRALQEVTLVGEV 206 (255)
T ss_dssp TTEEEEEETTTTEEEEECTTCCE
T ss_pred CCeEEEEECCCCeEEEEcCCCCE
Confidence 555 4455556778888887553
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.89 E-value=5.8 Score=35.26 Aligned_cols=144 Identities=17% Similarity=0.201 Sum_probs=74.4
Q ss_pred CCCEEEEeeCCC-----cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC----
Q 013274 55 EERYLLSGASDS-----SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD---- 125 (446)
Q Consensus 55 ~~~~l~s~s~Dg-----~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D---- 125 (446)
++.+++.|+.++ .+.+||+.+.+... +. .. .....+|.. ... ++.+++.|+.+
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~----~~------~~-p~~r~~~~~-----~~~--~~~iyv~GG~~~~~~ 173 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSM----LG------DM-QTAREGAGL-----VVA--SGVIYCLGGYDGLNI 173 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEE----EE------EC-SSCCBSCEE-----EEE--TTEEEEECCBCSSCB
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEE----CC------CC-CCCcccceE-----EEE--CCEEEEECCCCCCcc
Confidence 467777777553 57788876554311 00 00 011123331 122 56777887765
Q ss_pred -CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeCC-----CcEEEEeCCCCceee--eeeCCCCCeEE
Q 013274 126 -HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTED-----VQVRLCDIASGAISQ--TLSGHRDGIMT 195 (446)
Q Consensus 126 -~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~d-----~~v~vwd~~~~~~~~--~l~~h~~~v~s 195 (446)
..+.++|+.+.+-...-.++... ..+... +..+++.|+.+ ..+.+||++++.... .+........+
T Consensus 174 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~----~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 249 (301)
T 2vpj_A 174 LNSVEKYDPHTGHWTNVTPMATKRSGAGVALL----NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGA 249 (301)
T ss_dssp CCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred cceEEEEeCCCCcEEeCCCCCcccccceEEEE----CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeE
Confidence 46889998877654332222211 111111 23566666543 468999998875332 22211122223
Q ss_pred EEEecCCCeEEEEeeCC-----CcEEEEEccCC
Q 013274 196 VEWSTSSEWILVTGGCD-----GAIRFWDIRRA 223 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~D-----g~I~iWd~~~~ 223 (446)
+.+ +++ +++.|+.+ ..|.+||+.+.
T Consensus 250 ~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 250 TVL--RGR-LYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEE--TTE-EEEECCBCSSSBEEEEEEEETTTT
T ss_pred EEE--CCE-EEEEcCcCCCcccccEEEEcCCCC
Confidence 332 444 56777655 35777887654
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=90.60 E-value=10 Score=34.95 Aligned_cols=114 Identities=11% Similarity=0.103 Sum_probs=64.3
Q ss_pred eEEEEEcc--CCC--EEEEeec--CCcEEEEecCcCceeeeeeeEEEe-ecCCCeEEEEcCCCcEEEEeCC---------
Q 013274 312 VTGLKVTE--DGM--YLLSAGS--DSRIRLWDVESGRNTLVNFETVRL-QTSKPIQLATTQDPAVVFVPCM--------- 375 (446)
Q Consensus 312 v~~l~fs~--dg~--~l~sgs~--D~~i~lWd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--------- 375 (446)
...+.+.+ +|. +++.... +.+|.+|++.........+..... ....+..+...+++...+....
T Consensus 114 PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~ 193 (355)
T 3sre_A 114 PHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKS 193 (355)
T ss_dssp EEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHH
T ss_pred eeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCccccc
Confidence 34455544 453 3344333 678889887654322222222111 1234556777777776555431
Q ss_pred -------CceEEEEeecCceEEEecccccceEEEEEcCCCCEEEE-eeCCCcEEEeCCC
Q 013274 376 -------TAVKAFDIWSGKTCLTFRGHYEYVNCCCFSSQDQELYT-GGNDRQILVWCPS 426 (446)
Q Consensus 376 -------~~~~~~d~~~~~~~~~l~gH~~~v~~~~fSpd~~~lvt-gs~D~~v~vW~~~ 426 (446)
..-++|.+..++ +..+...-...+.++||||++.|+- -+..+.|.+|+.+
T Consensus 194 ~e~~~~~~~g~vyr~d~~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 194 WEMHLGLAWSFVTYYSPND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp HHHHTTCCCEEEEEECTTC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred chhhccCCccEEEEEECCe-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 124566665553 3334444456799999999987664 4557888888775
No 307
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=90.26 E-value=16 Score=36.59 Aligned_cols=165 Identities=9% Similarity=-0.011 Sum_probs=88.7
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEE-
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG- 122 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~- 122 (446)
.....|+++..++++.++-+..+.|.+.+++.... .++.. ... .....+++.|.++.++.|-
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~-----------~~l~~--~~l----~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR-----------KVLFW--QEL----DQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-----------EEEEC--SSC----SCCCCEEEETTTTEEEEEEC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE-----------EEEEe--CCC----CCCceEEEecCCCeEEEecc
Confidence 56788999876677777777889999999864211 11111 111 1123456666455455543
Q ss_pred eCCCeEEEEECCCCeeeEEEe-cCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecC
Q 013274 123 SYDHYVKVWDTNCTRVVMNFK-MPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTS 201 (446)
Q Consensus 123 s~D~~i~iWd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~ 201 (446)
+....|...+++......... .-.....+++.+. +..++.+=...+.|...|++.......+.+.-....++++..+
T Consensus 147 g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~--~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~ 224 (619)
T 3s94_A 147 GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYE--EQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED 224 (619)
T ss_dssp SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETT--TTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS
T ss_pred CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEcc--CCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC
Confidence 223566666665332222111 1122345555543 2345555556778999998765443333322222346666544
Q ss_pred CCeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 202 SEWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 202 ~~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
.+++|-...+.|...|..+++....+
T Consensus 225 --~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 225 --ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp --EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred --EEEEecCCCCEEEEEECCCCcccEEE
Confidence 56677666788999998776654443
No 308
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.58 E-value=11 Score=33.51 Aligned_cols=104 Identities=13% Similarity=0.203 Sum_probs=49.7
Q ss_pred CCCEEEEeecC-------CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC------CceEEEEeecC
Q 013274 320 DGMYLLSAGSD-------SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM------TAVKAFDIWSG 386 (446)
Q Consensus 320 dg~~l~sgs~D-------~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~~~ 386 (446)
+++.++.|+.+ ..+.+||+.+.+-... .... .......+...+..+++.++. ..+.++|..+.
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~--~~~p--~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYI--AEMS--TRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEE--CCCS--SCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEEC--CCCc--cccccccEEEECCEEEEECCCCCCcccceEEEEeCCCC
Confidence 45555556543 3488889887643221 1111 111111122224444444432 35677776543
Q ss_pred c--eEEEecccccceEEEEEcCCCCEEEEeeCCC-----cEEEeCCCCCC
Q 013274 387 K--TCLTFRGHYEYVNCCCFSSQDQELYTGGNDR-----QILVWCPSRHI 429 (446)
Q Consensus 387 ~--~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D~-----~v~vW~~~~~~ 429 (446)
+ .+..+......-..+. .+++.++.|+.++ .+.++|+.+..
T Consensus 231 ~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 231 AWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 2 2222221111112222 3788888888764 47888887654
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.33 E-value=4.2 Score=36.24 Aligned_cols=144 Identities=18% Similarity=0.261 Sum_probs=72.6
Q ss_pred CCCEEEEeeCCC-----cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC----
Q 013274 55 EERYLLSGASDS-----SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD---- 125 (446)
Q Consensus 55 ~~~~l~s~s~Dg-----~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D---- 125 (446)
++.+++.|+.++ .+.+||+.+.+.... .. . .....+|. ++.. ++.+++.|+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~----~~------~-p~~r~~~~-----~~~~--~~~iyv~GG~~~~~~ 169 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV----AP------M-NTRRSSVG-----VGVV--GGLLYAVGGYDVASR 169 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE----CC------C-SSCCBSCE-----EEEE--TTEEEEECCEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeec----CC------C-CCcccCce-----EEEE--CCEEEEEeCCCCCCC
Confidence 467777777664 477788765543110 00 0 01112332 1222 56677777653
Q ss_pred ---CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeCC-----CcEEEEeCCCCceee--eeeCCCCCe
Q 013274 126 ---HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTED-----VQVRLCDIASGAISQ--TLSGHRDGI 193 (446)
Q Consensus 126 ---~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~d-----~~v~vwd~~~~~~~~--~l~~h~~~v 193 (446)
..+.++|+.+.+-...-.++... ..+... +..+++.|+.+ ..+.+||++++.... .+......-
T Consensus 170 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~ 245 (302)
T 2xn4_A 170 QCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL----NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNA 245 (302)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSC
T ss_pred ccccEEEEEeCCCCcEEECCCCccccccccEEEE----CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccC
Confidence 35889998877654332222211 111111 33566666543 468999998875322 121111111
Q ss_pred EEEEEecCCCeEEEEeeCCC-----cEEEEEccCC
Q 013274 194 MTVEWSTSSEWILVTGGCDG-----AIRFWDIRRA 223 (446)
Q Consensus 194 ~sv~~s~~~~~~l~S~s~Dg-----~I~iWd~~~~ 223 (446)
..+.+ +++ +++.|+.++ .+.+||+.+.
T Consensus 246 ~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 246 GVCAV--NGL-LYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTT
T ss_pred eEEEE--CCE-EEEECCcCCCcccccEEEEcCCCC
Confidence 22222 444 567777553 4788887654
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=89.14 E-value=15 Score=34.80 Aligned_cols=107 Identities=9% Similarity=0.158 Sum_probs=75.3
Q ss_pred EccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEee----cCCCeEEEEcCCCcEEEEeCCCceEEEEeecCc-----
Q 013274 317 VTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQ----TSKPIQLATTQDPAVVFVPCMTAVKAFDIWSGK----- 387 (446)
Q Consensus 317 fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~----- 387 (446)
...+|..++.+ .++.||.-++.... .+..+... .....++..+|++.++++.+...+.+..+-.+.
T Consensus 28 ~~~n~t~i~~a-~~n~iR~~~i~~~~----~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~ 102 (452)
T 3pbp_A 28 SSQNGTRIVFI-QDNIIRWYNVLTDS----LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVED 102 (452)
T ss_dssp EETTTTEEEEE-ETTEEEEEETTTCS----SCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCC
T ss_pred EEcCCCEEEEE-ECCEEEEEECCCCC----cceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcc
Confidence 44677776655 56889988887432 23333332 224567899999999999988888888874221
Q ss_pred -------eEEEecc------cccceEEEEEcCC---CCEEEEeeCCCcEEEeCCCCC
Q 013274 388 -------TCLTFRG------HYEYVNCCCFSSQ---DQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 388 -------~~~~l~g------H~~~v~~~~fSpd---~~~lvtgs~D~~v~vW~~~~~ 428 (446)
..+++.- ...+|-.+.|+|- +..||+--.|++||+|++..+
T Consensus 103 ~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s 159 (452)
T 3pbp_A 103 VSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS 159 (452)
T ss_dssp HHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT
T ss_pred cccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC
Confidence 1223332 2567999999996 467999999999999999864
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=88.95 E-value=3.5 Score=38.15 Aligned_cols=103 Identities=17% Similarity=0.184 Sum_probs=56.0
Q ss_pred CeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCC---CcEEEEe-CC--------Cce
Q 013274 311 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQD---PAVVFVP-CM--------TAV 378 (446)
Q Consensus 311 ~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~--------~~~ 378 (446)
....|+|.|||.++++ ..+++|+++|. .++..+..+.........+.-+++.|+ ...+++. .. ..+
T Consensus 30 ~P~~ia~~pdG~l~V~-e~~g~I~~~d~-~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVT-ERPGRLVLISP-SGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp CEEEEEEEETTEEEEE-ETTTEEEEECS-SCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred CCeEEEEcCCCeEEEE-eCCCEEEEEeC-CCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3678999999986665 45699999973 343111111100001234556788886 3444443 21 345
Q ss_pred EEEEeecC--c-----e-EEEeccc-ccceEEEEEcCCCCEEEEee
Q 013274 379 KAFDIWSG--K-----T-CLTFRGH-YEYVNCCCFSSQDQELYTGG 415 (446)
Q Consensus 379 ~~~d~~~~--~-----~-~~~l~gH-~~~v~~~~fSpd~~~lvtgs 415 (446)
..++.... . . +..+... .-....|+|.|||.+.+|.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 55555433 1 1 1123311 11246899999999888754
No 312
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=87.75 E-value=24 Score=35.36 Aligned_cols=164 Identities=8% Similarity=0.022 Sum_probs=96.2
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEE-
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG- 122 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~- 122 (446)
.....|+++..++++.++-+..+.|.+.+++... +.++.. ..-.....+++.|..+.++.|-
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~-----------~~~l~~------~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQH-----------RQVLVW------KDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTT-----------CEEEEC------SSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCc-----------EEEEEe------CCCCCcccEEEccCCCeEEEeCC
Confidence 4567788876566777777777888888875321 111111 0112244667766566555543
Q ss_pred eCCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCC
Q 013274 123 SYDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSS 202 (446)
Q Consensus 123 s~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~ 202 (446)
+....|...+++..........-.....+++.+. +..+..+=...+.|..+|++.... ..+...-.....+++..
T Consensus 143 g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~--~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-- 217 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYA--KRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-- 217 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEECSCSSEEEEEEETT--TTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--
T ss_pred CCCCEEEEEeCCCCceEEEECCCCCcceEEEccc--cCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--
Confidence 2356777777765433222222223455666543 234555556678899999976544 34444444456788764
Q ss_pred CeEEEEeeCCCcEEEEEccCCceeEEe
Q 013274 203 EWILVTGGCDGAIRFWDIRRAGCFRVL 229 (446)
Q Consensus 203 ~~~l~S~s~Dg~I~iWd~~~~~~~~~~ 229 (446)
..+++|-...+.|...|..+++....+
T Consensus 218 ~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 218 DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 356677666788998987766554444
No 313
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=86.34 E-value=3.4 Score=37.99 Aligned_cols=112 Identities=7% Similarity=0.048 Sum_probs=70.2
Q ss_pred cEEEEEeCCCeEEEEECCCCeeeEEEecC--CceEEeeeccCCCCceEEEEe-eCCCcEEEEeCCCCceeeeeeC----C
Q 013274 117 GLFVTGSYDHYVKVWDTNCTRVVMNFKMP--GKVYRTAMSPLAASHMLIAAG-TEDVQVRLCDIASGAISQTLSG----H 189 (446)
Q Consensus 117 ~~l~s~s~D~~i~iWd~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~lasg-s~d~~v~vwd~~~~~~~~~l~~----h 189 (446)
++++.++.||.|.-.|.++|+.+-++... .......-.....++..++.. +.||.+..+|.++|.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 47889999999999999999998887654 222211111111122344443 6899999999998855443321 1
Q ss_pred CCCeEE---EEE------ecCCCeEEEEeeCCCcEEEEEccCCceeEEee
Q 013274 190 RDGIMT---VEW------STSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230 (446)
Q Consensus 190 ~~~v~s---v~~------s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~ 230 (446)
..++.. ..+ + .+. .+++|+.+|.+.--|+++++.+-.+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~-~~g-~Vy~Gs~~g~l~ald~~tG~~~W~~~ 138 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIV-EDE-KVYTGSMRTIMYTINMLNGEIISAFG 138 (339)
T ss_dssp TCSEEEECC-----------CCE-EEEECEEEEEEEEEETTTCCEEEEES
T ss_pred ccccccCCCceeecccccc-cCC-EEEEEecCCEEEEEECCCCcEEEEEe
Confidence 122221 000 1 222 46789999999999999998766654
No 314
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=86.20 E-value=18 Score=32.27 Aligned_cols=58 Identities=9% Similarity=0.088 Sum_probs=30.9
Q ss_pred EEEEEeCCCeEEEEECCCCeeeEEEecCC--c--eEEeeeccCCCCceEEEEeeC-----C------CcEEEEeCCCCce
Q 013274 118 LFVTGSYDHYVKVWDTNCTRVVMNFKMPG--K--VYRTAMSPLAASHMLIAAGTE-----D------VQVRLCDIASGAI 182 (446)
Q Consensus 118 ~l~s~s~D~~i~iWd~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~lasgs~-----d------~~v~vwd~~~~~~ 182 (446)
+++.|+ ..+.+||..+.+-.. ..++. . ...++.. +..+++.|+. . ..+.+||..+++.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTK----ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECT----TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEE----CCEEEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 344555 578999998877543 33322 1 1222221 2345555552 1 1378889888753
No 315
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.17 E-value=18 Score=32.20 Aligned_cols=103 Identities=11% Similarity=0.154 Sum_probs=49.0
Q ss_pred CCCEEEEeecC-----CcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCC------CceEEEEeecCc-
Q 013274 320 DGMYLLSAGSD-----SRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCM------TAVKAFDIWSGK- 387 (446)
Q Consensus 320 dg~~l~sgs~D-----~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~d~~~~~- 387 (446)
+++.++.|+.+ ..+.+||+.+.+-... ........ ...++. .+..+++.++. ..+..+|+.+.+
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~--~~~p~~r~-~~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI--TAMNTIRS-GAGVCV-LHNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC--CCCSSCCB-SCEEEE-ETTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC--CCCCCccc-cceEEE-ECCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 56666666654 4588889887643221 11100000 111222 24444444432 356777765442
Q ss_pred -eEEEecccccceEEEEEcCCCCEEEEeeCC-----CcEEEeCCCCC
Q 013274 388 -TCLTFRGHYEYVNCCCFSSQDQELYTGGND-----RQILVWCPSRH 428 (446)
Q Consensus 388 -~~~~l~gH~~~v~~~~fSpd~~~lvtgs~D-----~~v~vW~~~~~ 428 (446)
.+..+.........+. -+++.++-|+.+ ..+.++++.+.
T Consensus 244 ~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 244 TFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred EECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1222221111112222 377888888765 34667777654
No 316
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.32 E-value=7.7 Score=35.73 Aligned_cols=103 Identities=17% Similarity=0.127 Sum_probs=58.7
Q ss_pred CeEEEEEccCCCEEEEeecCCcEEEEecCcCceeee-eeeEE-EeecCCCeEEEEcCC---CcEEEEe----CCCceEEE
Q 013274 311 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV-NFETV-RLQTSKPIQLATTQD---PAVVFVP----CMTAVKAF 381 (446)
Q Consensus 311 ~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~---~~~~~~~----~~~~~~~~ 381 (446)
....|+|.|||.++++--..|+|++++...++.... .+... ........-+++.|+ ...+++. ....+.-+
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~ 112 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRM 112 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEE
Confidence 468899999999888765589999998765543211 01000 011234456788775 2333332 22344445
Q ss_pred EeecC----------c-eEEEec---ccccceEEEEEcCCCCEEEEee
Q 013274 382 DIWSG----------K-TCLTFR---GHYEYVNCCCFSSQDQELYTGG 415 (446)
Q Consensus 382 d~~~~----------~-~~~~l~---gH~~~v~~~~fSpd~~~lvtgs 415 (446)
.+..+ + ++..+. .|. ...|+|.|||.+.++.+
T Consensus 113 ~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 113 LYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECB
T ss_pred EeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEEC
Confidence 44331 1 112232 343 35799999999888865
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=84.59 E-value=10 Score=33.83 Aligned_cols=144 Identities=17% Similarity=0.198 Sum_probs=73.2
Q ss_pred CCCEEEEeeCC-----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCC----
Q 013274 55 EERYLLSGASD-----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYD---- 125 (446)
Q Consensus 55 ~~~~l~s~s~D-----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D---- 125 (446)
++++++.|+.+ ..+.+||+.+.+..... .+ .....+|.. +.. ++.+++.|+.+
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~----------p~~r~~~~~-----~~~--~~~iyv~GG~~~~~~ 182 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PM----------LTRRIGVGV-----AVL--NRLLYAVGGFDGTNR 182 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECC-CC----------SSCCBSCEE-----EEE--TTEEEEECCBCSSCB
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECC-CC----------CccccceEE-----EEE--CCEEEEEeCCCCCCc
Confidence 46777777654 35778888765432110 00 011123331 222 56777777765
Q ss_pred -CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeCC-----CcEEEEeCCCCceee--eeeCCCCCeEE
Q 013274 126 -HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTED-----VQVRLCDIASGAISQ--TLSGHRDGIMT 195 (446)
Q Consensus 126 -~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~d-----~~v~vwd~~~~~~~~--~l~~h~~~v~s 195 (446)
..+.++|+.+.+-...-.++... ..+... +..+++.|+.+ ..+.+||+++..... .+........+
T Consensus 183 ~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~ 258 (308)
T 1zgk_A 183 LNSAECYYPERNEWRMITAMNTIRSGAGVCVL----HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGI 258 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEE
T ss_pred CceEEEEeCCCCeEeeCCCCCCccccceEEEE----CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEE
Confidence 45888998876543322222111 111111 33466666543 569999998875322 22211122222
Q ss_pred EEEecCCCeEEEEeeCC-----CcEEEEEccCC
Q 013274 196 VEWSTSSEWILVTGGCD-----GAIRFWDIRRA 223 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~D-----g~I~iWd~~~~ 223 (446)
+.+ +++ +++.|+.+ ..+.+||+.+.
T Consensus 259 ~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 259 TVH--QGR-IYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp EEE--TTE-EEEECCBCSSCBCCEEEEEETTTT
T ss_pred EEE--CCE-EEEEcCcCCCcccceEEEEcCCCC
Confidence 222 444 56777654 45677777654
No 318
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.47 E-value=10 Score=36.35 Aligned_cols=106 Identities=13% Similarity=0.129 Sum_probs=57.3
Q ss_pred CeEEEEEccCCCEEEEeecCCcEEEEecCcCceeee-eeeEEEe---ecCCCeEEEEcCC---CcEEEEeCC--------
Q 013274 311 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLV-NFETVRL---QTSKPIQLATTQD---PAVVFVPCM-------- 375 (446)
Q Consensus 311 ~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~-~~~~~~~---~~~~~~~~~~~~~---~~~~~~~~~-------- 375 (446)
....|+|.|+|.++++-...++|++++...++.... .+..... ......-+++.|+ ...+++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 367899999999888765445798887655443211 1111000 0122335788874 444443321
Q ss_pred ------CceEEEEeecC-------ce-EEEecc-cccceEEEEEcCCCCEEEEeeC
Q 013274 376 ------TAVKAFDIWSG-------KT-CLTFRG-HYEYVNCCCFSSQDQELYTGGN 416 (446)
Q Consensus 376 ------~~~~~~d~~~~-------~~-~~~l~g-H~~~v~~~~fSpd~~~lvtgs~ 416 (446)
..+.-+++... +. +..+.. ..-....|+|.|||.+.++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 23444444322 11 112322 1113689999999998887553
No 319
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=82.75 E-value=33 Score=32.48 Aligned_cols=94 Identities=15% Similarity=0.190 Sum_probs=61.4
Q ss_pred EeEEEEeecCCcEEEEEeCCCeEEEEECCCCe------------eeEEEec-------CCceEEeeeccCCCCceEEEEe
Q 013274 106 ISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTR------------VVMNFKM-------PGKVYRTAMSPLAASHMLIAAG 166 (446)
Q Consensus 106 V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~------------~~~~~~~-------~~~~~~~~~~~~~~~~~~lasg 166 (446)
|..+..+| +|.+||..+ +++|.|-.+..+. ..+.+.. ...+..+.|+|.+..+..|++=
T Consensus 68 i~qlvlSp-sG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVL 145 (452)
T 3pbp_A 68 TFHVISST-SGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVL 145 (452)
T ss_dssp TCEEEECT-TSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEE
T ss_pred eeEEEECC-CCCEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEE
Confidence 44455565 788888775 4689999987332 1233443 2458889999998776677777
Q ss_pred eCCCcEEEEeCCCC-ceeeeee---------CCCCCeEEEEEecC
Q 013274 167 TEDVQVRLCDIASG-AISQTLS---------GHRDGIMTVEWSTS 201 (446)
Q Consensus 167 s~d~~v~vwd~~~~-~~~~~l~---------~h~~~v~sv~~s~~ 201 (446)
..|+.|++||+... .....|. .+...|.+++|.++
T Consensus 146 tsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~ 190 (452)
T 3pbp_A 146 KEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKD 190 (452)
T ss_dssp ETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTT
T ss_pred ecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCC
Confidence 88999999999863 1111332 22345667777654
No 320
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.25 E-value=33 Score=36.34 Aligned_cols=39 Identities=26% Similarity=0.309 Sum_probs=30.7
Q ss_pred cEeEEEEeecCCcEEEEEeCCCeEEEEECCCCeeeEEEec
Q 013274 105 AISSAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVVMNFKM 144 (446)
Q Consensus 105 ~V~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 144 (446)
.+.++...+ +..+++|-+.|+++|+|++.+++++.+..+
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~dL 275 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIEL 275 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeecc
Confidence 344444443 566899999999999999999999887764
No 321
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=81.72 E-value=13 Score=33.30 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=36.1
Q ss_pred CCcEEEEEeC-C-----CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeCCC-----cEEEEeCCCCc
Q 013274 115 DTGLFVTGSY-D-----HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTEDV-----QVRLCDIASGA 181 (446)
Q Consensus 115 ~~~~l~s~s~-D-----~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~d~-----~v~vwd~~~~~ 181 (446)
++.+++.||. + ..+.++|+.+.+-...-.++... ..++.. +..+++.|+.++ .+.+||+++.+
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH----DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE----TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE----CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 5677788876 2 46889998876544322222211 111111 234555555433 58899998875
Q ss_pred e
Q 013274 182 I 182 (446)
Q Consensus 182 ~ 182 (446)
.
T Consensus 224 W 224 (315)
T 4asc_A 224 W 224 (315)
T ss_dssp E
T ss_pred E
Confidence 3
No 322
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.32 E-value=21 Score=31.89 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=52.1
Q ss_pred CCcEEEEEeCC------CeEEEEECCCCeeeEEEecCCce--EEeeeccCCCCceEEEEeeCC-----CcEEEEeCCCCc
Q 013274 115 DTGLFVTGSYD------HYVKVWDTNCTRVVMNFKMPGKV--YRTAMSPLAASHMLIAAGTED-----VQVRLCDIASGA 181 (446)
Q Consensus 115 ~~~~l~s~s~D------~~i~iWd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~lasgs~d-----~~v~vwd~~~~~ 181 (446)
++.+++.||.+ ..+.++|+.+.+-...-.++... ..++.. +..+++.|+.+ ..+.+||+++++
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH----KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE----TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE----CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 56777777642 45899999877644332222111 112211 23455555432 357899998875
Q ss_pred eee--eeeCCCCCeEEEEEecCCCeEEEEeeCC--------------CcEEEEEccCC
Q 013274 182 ISQ--TLSGHRDGIMTVEWSTSSEWILVTGGCD--------------GAIRFWDIRRA 223 (446)
Q Consensus 182 ~~~--~l~~h~~~v~sv~~s~~~~~~l~S~s~D--------------g~I~iWd~~~~ 223 (446)
... .+.........+.+ +++ +++.|+.+ ..+..||+.+.
T Consensus 234 W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~ 288 (318)
T 2woz_A 234 WEVMTEFPQERSSISLVSL--AGS-LYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKK 288 (318)
T ss_dssp EEECCCCSSCCBSCEEEEE--TTE-EEEECCBCCBC----CCBCCBCCCEEEEETTTT
T ss_pred EEECCCCCCcccceEEEEE--CCE-EEEECCeeccCCCCceeccceeeeEEEEeCCCC
Confidence 322 22222222222322 344 56666653 34667777654
No 323
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=79.23 E-value=28 Score=30.98 Aligned_cols=103 Identities=17% Similarity=0.296 Sum_probs=51.6
Q ss_pred CCcEEEEEeCC-------CeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeC------CCcEEEEeCCCCc
Q 013274 115 DTGLFVTGSYD-------HYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTE------DVQVRLCDIASGA 181 (446)
Q Consensus 115 ~~~~l~s~s~D-------~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~------d~~v~vwd~~~~~ 181 (446)
++.+++.||.+ ..+.++|+.+.+-...-.++......+... .+..+++.|+. -..+.+||+.+.+
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 186 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGD 186 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCE
Confidence 56778888764 357888888776544323332211111111 13345555543 2468999998875
Q ss_pred eee--eeeCCCCCeEEEEEecCCCeEEEEeeCCC-----cEEEEEccC
Q 013274 182 ISQ--TLSGHRDGIMTVEWSTSSEWILVTGGCDG-----AIRFWDIRR 222 (446)
Q Consensus 182 ~~~--~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg-----~I~iWd~~~ 222 (446)
... .+......-.++.+ +++ +++.|+.++ .+.+||+.+
T Consensus 187 W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 187 WKDLAPMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp EEEECCCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTT
T ss_pred EEECCCCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCC
Confidence 322 12211111122222 444 566666432 355666654
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=76.49 E-value=14 Score=33.90 Aligned_cols=118 Identities=6% Similarity=0.033 Sum_probs=64.7
Q ss_pred CEEEEeeCCCcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEE-eCCCeEEEEECCC
Q 013274 57 RYLLSGASDSSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTG-SYDHYVKVWDTNC 135 (446)
Q Consensus 57 ~~l~s~s~Dg~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~-s~D~~i~iWd~~~ 135 (446)
.+++.++.||.|.-.|.++++..=.. ......+.+... +.. .+.++..++.. ..||.|..++..+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~-~~~~~~p~~~~~-----~~~--------~~~~~~~~vv~p~~dG~l~a~~~~~ 76 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSI-EPENFQPLIEIQ-----EPS--------RLETYETLIIEPFGDGNIYYFNAHQ 76 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEE-CGGGSCCSEECC-----CSC--------TTTSSEEEEECCSTTTEEEEEETTT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEe-cCCccCCcEEec-----CCc--------cccCCcEEEEEECCCCEEEEEECCC
Confidence 46778888888888887766420000 000000000000 000 01133344443 5899999999888
Q ss_pred CeeeEEEecCCce----EEeeeccCC------CCceEEEEeeCCCcEEEEeCCCCceeeeeeC
Q 013274 136 TRVVMNFKMPGKV----YRTAMSPLA------ASHMLIAAGTEDVQVRLCDIASGAISQTLSG 188 (446)
Q Consensus 136 ~~~~~~~~~~~~~----~~~~~~~~~------~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~ 188 (446)
|.....+..+.-+ ....-.|.- .....+.+|+.++.+...|+++|+.++.+..
T Consensus 77 G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 77 GLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp EEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred CcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 8665555433211 111111111 0234678899999999999999999988763
No 325
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=75.78 E-value=17 Score=33.33 Aligned_cols=115 Identities=14% Similarity=0.178 Sum_probs=60.3
Q ss_pred CeEEEEEccCCC-EEEEeecCCcEEEEecCcCcee-eeeeeEEEe-ecCCCeEEEEcCC---CcEEEEeC---------C
Q 013274 311 AVTGLKVTEDGM-YLLSAGSDSRIRLWDVESGRNT-LVNFETVRL-QTSKPIQLATTQD---PAVVFVPC---------M 375 (446)
Q Consensus 311 ~v~~l~fs~dg~-~l~sgs~D~~i~lWd~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~---------~ 375 (446)
....|+|.|+|. ++++ ...++|++++....... +..+..... ......-+++.|+ ...+++.. .
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 367899999999 6654 56789999985422110 110100000 0123356778875 33444331 1
Q ss_pred CceEEEEeecC--c--eEE----Eec-----ccccceEEEEEcCCCCEEEEeeCC-------------CcEEEeCCCCC
Q 013274 376 TAVKAFDIWSG--K--TCL----TFR-----GHYEYVNCCCFSSQDQELYTGGND-------------RQILVWCPSRH 428 (446)
Q Consensus 376 ~~~~~~d~~~~--~--~~~----~l~-----gH~~~v~~~~fSpd~~~lvtgs~D-------------~~v~vW~~~~~ 428 (446)
..+..+++... + ... .+. .|. ...|+|.|||.+.++.+.. +.|.-.++++.
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 23444554322 1 111 122 232 3579999999777765442 35666676654
No 326
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=73.15 E-value=38 Score=30.68 Aligned_cols=51 Identities=16% Similarity=0.263 Sum_probs=23.4
Q ss_pred cEEEEeCCCCcee--eeeeCCCCCeEEEEEecCCCeEEEEeeCCC------cEEEEEccCCc
Q 013274 171 QVRLCDIASGAIS--QTLSGHRDGIMTVEWSTSSEWILVTGGCDG------AIRFWDIRRAG 224 (446)
Q Consensus 171 ~v~vwd~~~~~~~--~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg------~I~iWd~~~~~ 224 (446)
.+.+||+++.+.. ..+......-.++.+ +++ +++-|+.++ .|.++++++++
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~ 344 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLPW--NNS-LLIIGGETAGGKAVTDSVLITVKDNK 344 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEEE--TTE-EEEEEEECGGGCEEEEEEEEEC-CCS
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEEe--CCE-EEEEeeeCCCCCEeeeEEEEEEcCcE
Confidence 5789999877532 223322222223332 444 567777543 34444665544
No 327
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=72.40 E-value=54 Score=29.39 Aligned_cols=112 Identities=15% Similarity=0.077 Sum_probs=58.6
Q ss_pred CeEEEEEccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeec-CCCeEEEEcCCCcEEEEeCCCceEEEEeecCceE
Q 013274 311 AVTGLKVTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQT-SKPIQLATTQDPAVVFVPCMTAVKAFDIWSGKTC 389 (446)
Q Consensus 311 ~v~~l~fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 389 (446)
.+..+.+.+++..++ .+.+|.+.+.+...++ +...+....... .....+++.+++.+++++....+ .+....++.-
T Consensus 206 ~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~-tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~DgG~tW 282 (327)
T 2xbg_A 206 RLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSE-NWGELLSPLRRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDGGQTW 282 (327)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEETTEEE-EECCCBCTTSSCCSCEEEEEESSSSCEEEEESTTCE-EEESSTTSSC
T ss_pred ccceeEECCCCCEEE-EeCCceEEEecCCCCC-eeEeccCCcccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCCCccc
Confidence 467788889887665 4567877776422121 110000000000 11233455556666555443333 2333334433
Q ss_pred EEec---ccccceEEEEEcCCCCEEEEeeCCCcEEEeCCC
Q 013274 390 LTFR---GHYEYVNCCCFSSQDQELYTGGNDRQILVWCPS 426 (446)
Q Consensus 390 ~~l~---gH~~~v~~~~fSpd~~~lvtgs~D~~v~vW~~~ 426 (446)
..+. .+...+.+++|.++++ ++.++.++.|.-++.+
T Consensus 283 ~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~~~ 321 (327)
T 2xbg_A 283 QQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYVTD 321 (327)
T ss_dssp EECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEECCC
T ss_pred EEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEcCc
Confidence 3333 2345688999986655 5566778888877664
No 328
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=71.67 E-value=60 Score=29.56 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=51.9
Q ss_pred EEEEeecCCcEEEEEeCCCeEEEEECCCCeee--EEEe----cCCceEEeeeccCC-CCceEEEEeeCC-----CcEEEE
Q 013274 108 SAIWYPVDTGLFVTGSYDHYVKVWDTNCTRVV--MNFK----MPGKVYRTAMSPLA-ASHMLIAAGTED-----VQVRLC 175 (446)
Q Consensus 108 ~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~--~~~~----~~~~~~~~~~~~~~-~~~~~lasgs~d-----~~v~vw 175 (446)
.+.+.| ++.+++ +..++.|.+++ +++.. ..+. ..+....+++++.- .+..+.++-+.+ ..|..+
T Consensus 35 ~ia~~p-dG~l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~ 110 (352)
T 2ism_A 35 ALAFLP-DGGMLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVRL 110 (352)
T ss_dssp EEEECT-TSCEEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEEE
T ss_pred EEEEcC-CCeEEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEEE
Confidence 556665 676544 56679999998 34422 1111 12345677787752 123344443322 568888
Q ss_pred eCCCCc------eeeeee---CCCCCeEEEEEecCCCeEEEEee
Q 013274 176 DIASGA------ISQTLS---GHRDGIMTVEWSTSSEWILVTGG 210 (446)
Q Consensus 176 d~~~~~------~~~~l~---~h~~~v~sv~~s~~~~~~l~S~s 210 (446)
+...+. .+..+. +.......++|.|++. ++++.+
T Consensus 111 ~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~-Lyv~~G 153 (352)
T 2ism_A 111 RHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM-LYVTTG 153 (352)
T ss_dssp EECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC-EEEECC
T ss_pred EeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC-EEEEEC
Confidence 876542 112233 1112235789999885 455543
No 329
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=70.89 E-value=81 Score=31.93 Aligned_cols=156 Identities=10% Similarity=0.088 Sum_probs=76.5
Q ss_pred CCCEEEEeeCC----CcEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCC----
Q 013274 55 EERYLLSGASD----SSVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDH---- 126 (446)
Q Consensus 55 ~~~~l~s~s~D----g~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~---- 126 (446)
++.+++.||.+ ..+.+||+.+.+.......+... . ......+|.. +..+.++.+++.||.++
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~-~----~p~~R~~hs~-----~~~~~~~~lyv~GG~~~~~~~ 466 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSS-E----VPVARMCHTF-----TTISRNNQLLLIGGRKAPHQG 466 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCS-C----CCCCCBSCEE-----EEETTTTEEEEECCBSSTTCB
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCC-C----CCccccceEE-----EEEccCCEEEEEcCCCCCCCc
Confidence 56788888764 35788888765432100000000 0 0011123432 22211566777877543
Q ss_pred --eEEEEECCCCeeeEEEecCCc--eEEeeeccCCCCceEEEEeeCCC--cEEEEeCCCCceeee-----eeCCCCCeEE
Q 013274 127 --YVKVWDTNCTRVVMNFKMPGK--VYRTAMSPLAASHMLIAAGTEDV--QVRLCDIASGAISQT-----LSGHRDGIMT 195 (446)
Q Consensus 127 --~i~iWd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~lasgs~d~--~v~vwd~~~~~~~~~-----l~~h~~~v~s 195 (446)
.+.+||+.+.+....-.++.. .+..+... ++.+++.|+.++ .+.+||+.++..... +......-.+
T Consensus 467 ~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~---~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a 543 (695)
T 2zwa_A 467 LSDNWIFDMKTREWSMIKSLSHTRFRHSACSLP---DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAG 543 (695)
T ss_dssp CCCCEEEETTTTEEEECCCCSBCCBSCEEEECT---TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCE
T ss_pred cccEEEEeCCCCcEEECCCCCCCcccceEEEEc---CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeE
Confidence 578888887654332222221 11222211 334566665433 799999988753221 1112222233
Q ss_pred EEEecCCCeEEEEeeC--C-----CcEEEEEccCC
Q 013274 196 VEWSTSSEWILVTGGC--D-----GAIRFWDIRRA 223 (446)
Q Consensus 196 v~~s~~~~~~l~S~s~--D-----g~I~iWd~~~~ 223 (446)
+.+..+...+++.|+. + +.+..||+.+.
T Consensus 544 ~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 544 LEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp EEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred EEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 5555442346677765 2 35777777654
No 330
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=68.47 E-value=68 Score=28.91 Aligned_cols=64 Identities=13% Similarity=0.071 Sum_probs=33.6
Q ss_pred CCcEEEEEeCC-CeEEEEECCC--CeeeEEEecC-Cc--eEEeeeccCCCCceEEEEeeC-C---------CcEEEEeCC
Q 013274 115 DTGLFVTGSYD-HYVKVWDTNC--TRVVMNFKMP-GK--VYRTAMSPLAASHMLIAAGTE-D---------VQVRLCDIA 178 (446)
Q Consensus 115 ~~~~l~s~s~D-~~i~iWd~~~--~~~~~~~~~~-~~--~~~~~~~~~~~~~~~lasgs~-d---------~~v~vwd~~ 178 (446)
++.+++.||.+ ..+.++|+.+ .+....-.++ .. ...++.. +..+++.|+. + ..+.+||+.
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~----~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~ 94 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFI----DGNLYVFGGIGKNSEGLTQVFNDVHKYNPK 94 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEE----TTEEEEECCEEECTTSCEEECCCEEEEETT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEE----CCEEEEEcCCCCCCCccceeeccEEEEeCC
Confidence 56677777654 5688888863 3322211222 11 1112211 2345555554 2 468999998
Q ss_pred CCce
Q 013274 179 SGAI 182 (446)
Q Consensus 179 ~~~~ 182 (446)
+.+.
T Consensus 95 ~~~W 98 (357)
T 2uvk_A 95 TNSW 98 (357)
T ss_dssp TTEE
T ss_pred CCcE
Confidence 8753
No 331
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=60.65 E-value=53 Score=33.32 Aligned_cols=148 Identities=14% Similarity=0.113 Sum_probs=73.8
Q ss_pred CCCEEEEeeCCC------cEEEEEcccCcCCCCCCccccccceEEeccccccCccccEeEEEEeecCCcEEEEEeCCC--
Q 013274 55 EERYLLSGASDS------SVAVYDVQRATDYEGGGHIAKHRSVFVVDKQHEHGHKYAISSAIWYPVDTGLFVTGSYDH-- 126 (446)
Q Consensus 55 ~~~~l~s~s~Dg------~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~~~~~~~~~~~l~s~s~D~-- 126 (446)
++.+++.||.++ .+.+||+.+.+..... .+ .....+|.. +... ++.+++.||.++
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~-~~----------p~~R~~h~~-----~~~~-~~~iyv~GG~~~~~ 513 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIK-SL----------SHTRFRHSA-----CSLP-DGNVLILGGVTEGP 513 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECC-CC----------SBCCBSCEE-----EECT-TSCEEEECCBCSSC
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECC-CC----------CCCcccceE-----EEEc-CCEEEEECCCCCCC
Confidence 567777777543 4677887664432110 00 011234432 2211 677888888765
Q ss_pred eEEEEECCCCeeeEEEe---cCCce--EE-eeeccCCCCceEEEEeeC--C-----CcEEEEeCCCCce-----eeeeeC
Q 013274 127 YVKVWDTNCTRVVMNFK---MPGKV--YR-TAMSPLAASHMLIAAGTE--D-----VQVRLCDIASGAI-----SQTLSG 188 (446)
Q Consensus 127 ~i~iWd~~~~~~~~~~~---~~~~~--~~-~~~~~~~~~~~~lasgs~--d-----~~v~vwd~~~~~~-----~~~l~~ 188 (446)
.+.+||+.+.+....-. .+... .. +.+. .....+++.|+. + ..+.+||+.+... ...+..
T Consensus 514 ~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~--~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~ 591 (695)
T 2zwa_A 514 AMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFD--PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQ 591 (695)
T ss_dssp SEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEE--TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEE
T ss_pred CEEEEECCCCceEEccCCCCCCCcccceeEEEEe--CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCC
Confidence 68999998776433211 11111 11 1111 111345666654 2 4688999988772 122211
Q ss_pred ----CCCCeEEEEEecCCCeEEEEeeCC--------CcEEEEEccCC
Q 013274 189 ----HRDGIMTVEWSTSSEWILVTGGCD--------GAIRFWDIRRA 223 (446)
Q Consensus 189 ----h~~~v~sv~~s~~~~~~l~S~s~D--------g~I~iWd~~~~ 223 (446)
....-.++.+ .+++ +++.|+.+ ..|.+||+.+.
T Consensus 592 ~p~~~R~~~~~~~~-~~~~-iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 592 HPLFQRYGSQIKYI-TPRK-LLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp CGGGCCBSCEEEEE-ETTE-EEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred CCCCCcccceEEEe-CCCE-EEEECCccCCCCCCCCCeEEEEECCCC
Confidence 1111223333 2244 56667643 45788887654
No 332
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=60.47 E-value=46 Score=32.77 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=59.0
Q ss_pred eEEEEEccCCCEEE-EeecCCcEEEEecCcCce----ee-e---eeeEEEeecCCCeEEEEcCCCcEEEEe-CCCceEEE
Q 013274 312 VTGLKVTEDGMYLL-SAGSDSRIRLWDVESGRN----TL-V---NFETVRLQTSKPIQLATTQDPAVVFVP-CMTAVKAF 381 (446)
Q Consensus 312 v~~l~fs~dg~~l~-sgs~D~~i~lWd~~~~~~----~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 381 (446)
...+.++|||+|++ +|--+.++-++|+++-.. .+ . .........-.+...+|.+++....+- -.+.+..|
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqvvkW 404 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQVVKW 404 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEEEEE
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceEEEE
Confidence 34578999999864 556788999999885211 00 0 000000112356678888877333332 34678899
Q ss_pred EeecC----------ceEEEecccccceEEE-----EEcCCCCEEEEe
Q 013274 382 DIWSG----------KTCLTFRGHYEYVNCC-----CFSSQDQELYTG 414 (446)
Q Consensus 382 d~~~~----------~~~~~l~gH~~~v~~~-----~fSpd~~~lvtg 414 (446)
++.+. ..+..+.-|-.+-... .-.|||+||++.
T Consensus 405 ni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 405 NMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp EHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred eccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 98653 3444554443332211 235899999985
No 333
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=59.80 E-value=51 Score=31.56 Aligned_cols=27 Identities=15% Similarity=0.298 Sum_probs=21.3
Q ss_pred eEEEEEccCCC--EEEEeecCCcEEEEecC
Q 013274 312 VTGLKVTEDGM--YLLSAGSDSRIRLWDVE 339 (446)
Q Consensus 312 v~~l~fs~dg~--~l~sgs~D~~i~lWd~~ 339 (446)
-..|+|.|||. +|+ ....|.|++++..
T Consensus 16 P~~~a~~pdG~~rl~V-~er~G~i~~~~~~ 44 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFI-LEKEGYVKILTPE 44 (463)
T ss_dssp EEEEECCSSSSCCEEE-EETTTEEEEECTT
T ss_pred ceEEEECCCCCeEEEE-EeCCceEEEEeCC
Confidence 57899999996 555 5678999999754
No 334
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.79 E-value=18 Score=36.74 Aligned_cols=30 Identities=13% Similarity=0.428 Sum_probs=26.9
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEec
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKM 144 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~ 144 (446)
+..++++-+.|+++|+||+++++++....+
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456999999999999999999999887776
No 335
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=54.89 E-value=1.3e+02 Score=27.57 Aligned_cols=50 Identities=8% Similarity=0.060 Sum_probs=33.4
Q ss_pred CcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC
Q 013274 170 VQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 170 ~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
+.|..+|. ++ ...+...-..-..++|+|+++.++++-+..+.|..||+..
T Consensus 203 g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 203 SFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 34555554 32 2233333345688999999988777777788999999864
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=54.28 E-value=1.5e+02 Score=28.13 Aligned_cols=30 Identities=17% Similarity=0.258 Sum_probs=20.0
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEcc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDIR 221 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~ 221 (446)
...++++|.|+++ ++++-...+.|++++..
T Consensus 27 ~~P~~~a~~pdG~-l~V~e~~gg~I~~~~~~ 56 (454)
T 1cru_A 27 NKPHALLWGPDNQ-IWLTERATGKILRVNPE 56 (454)
T ss_dssp SSEEEEEECTTSC-EEEEETTTCEEEEECTT
T ss_pred CCceEEEEcCCCc-EEEEEcCCCEEEEEECC
Confidence 3567999999987 55654333467777654
No 337
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=50.95 E-value=24 Score=37.38 Aligned_cols=38 Identities=16% Similarity=0.371 Sum_probs=30.5
Q ss_pred CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEee
Q 013274 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230 (446)
Q Consensus 192 ~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~ 230 (446)
.+.++...++.. +++|-+.|+++|+|++.++.|+...+
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 456666666655 46799999999999999999988765
No 338
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=48.71 E-value=1.5e+02 Score=26.73 Aligned_cols=29 Identities=21% Similarity=0.408 Sum_probs=20.8
Q ss_pred CCeEEEEEecCCCeEEEEeeCCCcEEEEEc
Q 013274 191 DGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220 (446)
Q Consensus 191 ~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~ 220 (446)
..-+.++|.|++++++++ ...|.|++++.
T Consensus 18 ~~P~~i~~~pdG~~l~V~-e~~G~i~~~~~ 46 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLIT-LRGGELRHWQA 46 (353)
T ss_dssp SSEEEEEECSTTCCEEEE-ETTTEEEEEET
T ss_pred CCcEEEEEcCCCCEEEEE-eCCceEEEEeC
Confidence 345899999998744544 45688888874
No 339
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=46.26 E-value=17 Score=39.41 Aligned_cols=31 Identities=23% Similarity=0.261 Sum_probs=27.2
Q ss_pred CCcEEEEEeCCCeEEEEECCCCeeeEEEecC
Q 013274 115 DTGLFVTGSYDHYVKVWDTNCTRVVMNFKMP 145 (446)
Q Consensus 115 ~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~~ 145 (446)
+..+++|-+.|+++|+|++.+++++.+..+.
T Consensus 248 ~~~~lftL~~D~~LRiWsl~t~~~v~t~DL~ 278 (1139)
T 4fhn_B 248 TYNVLVMLSLDYKLKVLDLSTNQCVETIELS 278 (1139)
T ss_dssp TTTEEEEEBTTCEEEEEETTTTEEEEEEECC
T ss_pred CccEEEEEeCCCEEEEEECCCCCeEEeechh
Confidence 5678999999999999999999998887653
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=43.34 E-value=65 Score=31.76 Aligned_cols=50 Identities=8% Similarity=0.119 Sum_probs=34.0
Q ss_pred EEEEeCCC----Cc-eeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEccC
Q 013274 172 VRLCDIAS----GA-ISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 172 v~vwd~~~----~~-~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~ 222 (446)
|.+.|.+. +. ....++ -....-.+.++|+|++++++|-.+.++.++|+++
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k 354 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDK 354 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGG
T ss_pred eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeeh
Confidence 56666654 22 222222 2233356778999999999999999999999874
No 341
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=42.89 E-value=2.3e+02 Score=27.03 Aligned_cols=58 Identities=10% Similarity=0.029 Sum_probs=34.6
Q ss_pred EEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCCeEEEEeeCCCcEEEEEc
Q 013274 162 LIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSEWILVTGGCDGAIRFWDI 220 (446)
Q Consensus 162 ~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~ 220 (446)
++..-+.-|.|+++|++++.++..-+=..++|..-+....... ++.....|.|.--.+
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v 329 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCV 329 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEE
T ss_pred EEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEE
Confidence 4555567899999999999987665544455554444433333 234445554444433
No 342
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=41.16 E-value=44 Score=28.54 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=19.7
Q ss_pred eEEEEEcCCCCEEEEeeCCCcEEEeCCCCC
Q 013274 399 VNCCCFSSQDQELYTGGNDRQILVWCPSRH 428 (446)
Q Consensus 399 v~~~~fSpd~~~lvtgs~D~~v~vW~~~~~ 428 (446)
--++.|-|+|.+.++ .|+.|.-|++++.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~ 117 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQS 117 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCS
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcC
Confidence 356778888877666 5688877777553
No 343
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=40.75 E-value=3.8e+02 Score=28.99 Aligned_cols=60 Identities=8% Similarity=0.073 Sum_probs=39.0
Q ss_pred EEEeeCCCcEEEEeCCCCceeeee-eCCCCCeEEEEEecCC-----CeEEEEeeC-CCcEEEEEccCC
Q 013274 163 IAAGTEDVQVRLCDIASGAISQTL-SGHRDGIMTVEWSTSS-----EWILVTGGC-DGAIRFWDIRRA 223 (446)
Q Consensus 163 lasgs~d~~v~vwd~~~~~~~~~l-~~h~~~v~sv~~s~~~-----~~~l~S~s~-Dg~I~iWd~~~~ 223 (446)
++.++ ++.+.++.++.+.+...- ..-.+.|.|+++.|.. ..+++.|.+ |++|+|+++.+.
T Consensus 526 vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l 592 (1158)
T 3ei3_A 526 VVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSF 592 (1158)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTC
T ss_pred EEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCC
Confidence 44444 577888888765432111 1235689999987642 135678887 999999999753
No 344
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=39.16 E-value=26 Score=37.97 Aligned_cols=38 Identities=16% Similarity=0.367 Sum_probs=29.4
Q ss_pred eEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEeec
Q 013274 193 IMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLDQ 231 (446)
Q Consensus 193 v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~~ 231 (446)
+.+++..++.. ++++-+.|+++|+|++.++.|+...+-
T Consensus 240 ~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 240 IISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp BSCCEEETTTT-EEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eEEeeccCCcc-EEEEEeCCCEEEEEECCCCCeEEeech
Confidence 34445555655 467999999999999999999887654
No 345
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=36.36 E-value=2.5e+02 Score=25.52 Aligned_cols=31 Identities=16% Similarity=0.119 Sum_probs=23.2
Q ss_pred cceeEEEeecCCCCEEEEeeCCCcEEEEEccc
Q 013274 44 GSINSLQVDLTEERYLLSGASDSSVAVYDVQR 75 (446)
Q Consensus 44 ~~v~~l~~s~~~~~~l~s~s~Dg~i~lWd~~~ 75 (446)
..-+.|+|.| +++++++--..|.|++++.++
T Consensus 32 ~~P~~ia~~p-dG~llVter~~G~I~~v~~~~ 62 (347)
T 3das_A 32 NSPWGLAPLP-GGDLLVSSRDEATITRVDAKT 62 (347)
T ss_dssp SSEEEEEECT-TSCEEEEETTTCEEEEECTTT
T ss_pred CCceEEEEcC-CCcEEEEEecCCEEEEEECCC
Confidence 3457899986 678777776589999987543
No 346
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=36.08 E-value=47 Score=33.69 Aligned_cols=36 Identities=14% Similarity=0.219 Sum_probs=27.6
Q ss_pred CeEEEEEecCCCeEEEEeeCCCcEEEEEccCCceeEEee
Q 013274 192 GIMTVEWSTSSEWILVTGGCDGAIRFWDIRRAGCFRVLD 230 (446)
Q Consensus 192 ~v~sv~~s~~~~~~l~S~s~Dg~I~iWd~~~~~~~~~~~ 230 (446)
.|.++.+ +.. .+++-+.|.++|+||++++.++...+
T Consensus 223 ~Is~~~~--~~~-fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLF--HER-YLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEE--TTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEecc--CCc-EEEEEEcCCeEEEEEcCCCceEEeec
Confidence 3555554 344 47899999999999999998887764
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=34.24 E-value=1.1e+02 Score=30.08 Aligned_cols=57 Identities=14% Similarity=0.076 Sum_probs=37.2
Q ss_pred CCeEEEEcCCCcEEEEeCCC-----------ceEEEEe--ecCceEEEeccc-ccceEEEEEcCCCCEEEE
Q 013274 357 KPIQLATTQDPAVVFVPCMT-----------AVKAFDI--WSGKTCLTFRGH-YEYVNCCCFSSQDQELYT 413 (446)
Q Consensus 357 ~~~~~~~~~~~~~~~~~~~~-----------~~~~~d~--~~~~~~~~l~gH-~~~v~~~~fSpd~~~lvt 413 (446)
.+-.+.+.+++.+.+.-... .-.+|-+ .++++...+.+. ...++.++||||++.|..
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV 547 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEE
Confidence 45567888888777742211 1144444 456666666554 356899999999998874
No 348
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=27.29 E-value=3.6e+02 Score=24.59 Aligned_cols=89 Identities=18% Similarity=0.249 Sum_probs=58.5
Q ss_pred CCCeEEEEECCCCeeeEEEecCCceEEeeeccCCCCceEEEEeeCCCcEEEEeCCCCceeeeeeCCCCCeEEEEEecCCC
Q 013274 124 YDHYVKVWDTNCTRVVMNFKMPGKVYRTAMSPLAASHMLIAAGTEDVQVRLCDIASGAISQTLSGHRDGIMTVEWSTSSE 203 (446)
Q Consensus 124 ~D~~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lasgs~d~~v~vwd~~~~~~~~~l~~h~~~v~sv~~s~~~~ 203 (446)
++..|.|-|+..+....+.++.. .+.-+.|. ..++|.-. ...+.+||+++...++.+.= ...|.--.|-.+..
T Consensus 47 ~~~~VvIiDl~n~~~~~Rrpi~A--dsAIMnP~---~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~~ 119 (365)
T 2xzh_A 47 EQAQVVIIDMNDPSNPIRRPISA--DSAIMNPA---SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLNT 119 (365)
T ss_dssp TEEEEEEEETTSTTSCEEEECCC--SEEEECSS---SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSSE
T ss_pred CCCEEEEEECCCCCCcccccccc--ceeeeCCC---ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCCe
Confidence 44578899998866555555432 23445553 34555544 57899999999987776553 45777778865544
Q ss_pred eEEEEeeCCCcEEEEEccC
Q 013274 204 WILVTGGCDGAIRFWDIRR 222 (446)
Q Consensus 204 ~~l~S~s~Dg~I~iWd~~~ 222 (446)
.-|+| +..|.-|++..
T Consensus 120 L~lVT---~taVyHWs~~~ 135 (365)
T 2xzh_A 120 VALVT---DNAVYHWSMEG 135 (365)
T ss_dssp EEEEE---SSEEEEEESST
T ss_pred EEEEc---CCcEEEEcccC
Confidence 44555 45799999864
No 349
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=26.81 E-value=1.5e+02 Score=33.10 Aligned_cols=107 Identities=8% Similarity=0.073 Sum_probs=63.3
Q ss_pred EccCCCEEEEeecCCcEEEEecCcCceeeeeeeEEEeecCCCeEEEEcCCCcEEEEeCCCceEEEEeec-CceEEEeccc
Q 013274 317 VTEDGMYLLSAGSDSRIRLWDVESGRNTLVNFETVRLQTSKPIQLATTQDPAVVFVPCMTAVKAFDIWS-GKTCLTFRGH 395 (446)
Q Consensus 317 fs~dg~~l~sgs~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~-~~~~~~l~gH 395 (446)
.+|..+.|+-- ...++.++|+++... +. ... ...++.+=-.-++..+...+.++|.-|++.. ..+.+.|..|
T Consensus 73 MnP~~~iiALr-ag~~lQiFnl~~k~k-lk---s~~--~~e~VvfWkWis~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 73 MNPASKVIALK-AGKTLQIFNIEMKSK-MK---AHT--MTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred cCCCcceEEEe-cCCeEEEeehHHhhh-hc---ccc--cCCCceEEEecCCCeeEEEcCCeEEEeccCCCCccHHHHhcc
Confidence 34555544433 367899999987532 11 111 1112111112245667777788999999963 2344444444
Q ss_pred ----ccceEEEEEcCCCCEEEEe-------eCCCcEEEeCCCCCCC
Q 013274 396 ----YEYVNCCCFSSQDQELYTG-------GNDRQILVWCPSRHIS 430 (446)
Q Consensus 396 ----~~~v~~~~fSpd~~~lvtg-------s~D~~v~vW~~~~~~~ 430 (446)
...|-.-.-+++.+|++-. ...|.+.+++.++..+
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~s 191 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS 191 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccc
Confidence 3457777788999998732 2457788888776544
No 350
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=22.93 E-value=5.5e+02 Score=25.26 Aligned_cols=56 Identities=16% Similarity=0.116 Sum_probs=37.6
Q ss_pred CeEEEEcCCCcEEEEeCCC-------------ceEEEEeecCceEEEecccc-cceEEEEEcCCCCEEEE
Q 013274 358 PIQLATTQDPAVVFVPCMT-------------AVKAFDIWSGKTCLTFRGHY-EYVNCCCFSSQDQELYT 413 (446)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~-------------~~~~~d~~~~~~~~~l~gH~-~~v~~~~fSpd~~~lvt 413 (446)
+-.+++++.+.+++.-..+ .+.+.+..++++.+-+.++. .+++.++|+||++.|..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFV 547 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEE
Confidence 4567888888765553221 12233345677777777764 67999999999988764
Done!