Query 013282
Match_columns 446
No_of_seqs 645 out of 3808
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 07:39:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013282.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013282hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 6E-41 2.1E-45 315.9 40.7 287 117-430 28-317 (321)
2 1vyh_C Platelet-activating fac 100.0 8.2E-41 2.8E-45 325.8 39.3 285 113-430 100-407 (410)
3 1got_B GT-beta; complex (GTP-b 100.0 2.1E-39 7.3E-44 307.9 43.3 287 113-430 47-339 (340)
4 2pbi_B Guanine nucleotide-bind 100.0 1.3E-38 4.3E-43 304.2 40.4 288 113-430 56-353 (354)
5 2ynn_A Coatomer subunit beta'; 100.0 3.6E-38 1.2E-42 294.6 41.0 279 114-425 6-294 (304)
6 4gqb_B Methylosome protein 50; 100.0 2.1E-38 7.2E-43 301.1 37.9 236 191-431 84-328 (344)
7 3iz6_a 40S ribosomal protein R 100.0 2.5E-39 8.7E-44 312.1 30.5 290 113-431 58-372 (380)
8 1erj_A Transcriptional repress 100.0 4.5E-37 1.5E-41 297.7 42.9 295 119-431 62-386 (393)
9 2ynn_A Coatomer subunit beta'; 100.0 1.5E-37 5.2E-42 290.4 36.3 234 191-430 15-255 (304)
10 3ow8_A WD repeat-containing pr 100.0 1.8E-37 6.2E-42 292.1 34.8 235 191-430 34-275 (321)
11 1vyh_C Platelet-activating fac 100.0 2.2E-37 7.4E-42 301.6 35.8 233 191-430 110-365 (410)
12 4g56_B MGC81050 protein; prote 100.0 6.4E-38 2.2E-42 299.7 30.8 290 120-432 41-341 (357)
13 3frx_A Guanine nucleotide-bind 100.0 2.9E-36 1E-40 283.6 40.2 284 116-431 12-314 (319)
14 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.3E-36 1.1E-40 286.5 39.4 293 116-436 10-337 (345)
15 2hes_X YDR267CP; beta-propelle 100.0 6.4E-36 2.2E-40 282.7 38.8 287 114-430 7-324 (330)
16 4ery_A WD repeat-containing pr 100.0 1.3E-35 4.3E-40 278.1 39.9 285 113-430 15-308 (312)
17 2xzm_R RACK1; ribosome, transl 100.0 3.2E-35 1.1E-39 279.4 40.3 291 114-431 14-337 (343)
18 1nr0_A Actin interacting prote 100.0 1.9E-35 6.3E-40 302.7 38.8 261 145-430 33-351 (611)
19 1got_B GT-beta; complex (GTP-b 100.0 3.5E-35 1.2E-39 278.8 37.7 232 191-430 57-297 (340)
20 2ymu_A WD-40 repeat protein; u 100.0 1E-34 3.5E-39 294.9 40.5 255 145-430 319-576 (577)
21 3fm0_A Protein CIAO1; WDR39,SG 100.0 2.6E-35 8.9E-40 280.3 33.7 238 191-431 18-280 (345)
22 2pm7_B Protein transport prote 100.0 4.5E-35 1.5E-39 272.6 33.6 237 191-431 11-282 (297)
23 1nr0_A Actin interacting prote 100.0 7.4E-35 2.5E-39 298.3 38.4 286 112-430 50-393 (611)
24 2hes_X YDR267CP; beta-propelle 100.0 1.3E-34 4.3E-39 273.8 36.5 237 191-431 16-277 (330)
25 3frx_A Guanine nucleotide-bind 100.0 2.2E-34 7.6E-39 270.8 37.7 229 191-425 19-259 (319)
26 4gqb_B Methylosome protein 50; 100.0 1.3E-34 4.5E-39 274.9 35.3 238 134-394 86-333 (344)
27 1sq9_A Antiviral protein SKI8; 100.0 1.1E-34 3.9E-39 280.4 33.7 285 116-430 11-391 (397)
28 1gxr_A ESG1, transducin-like e 100.0 5.9E-33 2E-37 261.7 43.9 280 118-430 48-333 (337)
29 2pbi_B Guanine nucleotide-bind 100.0 6.4E-34 2.2E-38 271.6 37.4 233 191-430 66-311 (354)
30 2xzm_R RACK1; ribosome, transl 100.0 1.2E-33 4.1E-38 268.6 38.2 233 191-430 23-281 (343)
31 3zwl_B Eukaryotic translation 100.0 4.9E-33 1.7E-37 265.5 41.9 284 113-431 24-343 (369)
32 3dm0_A Maltose-binding peripla 100.0 1.5E-33 5.1E-38 293.0 40.3 283 116-430 377-689 (694)
33 3k26_A Polycomb protein EED; W 100.0 1.4E-34 4.7E-39 276.1 29.6 284 119-430 16-362 (366)
34 4ery_A WD repeat-containing pr 100.0 3.1E-33 1.1E-37 261.8 38.2 233 191-430 25-264 (312)
35 3iz6_a 40S ribosomal protein R 100.0 1.6E-34 5.4E-39 278.6 29.9 234 191-430 68-325 (380)
36 2ymu_A WD-40 repeat protein; u 100.0 4.1E-33 1.4E-37 283.1 41.8 255 145-430 278-535 (577)
37 3i2n_A WD repeat-containing pr 100.0 8.6E-34 2.9E-38 269.8 34.4 290 116-431 13-350 (357)
38 2pm9_A Protein WEB1, protein t 100.0 6.9E-35 2.4E-39 283.6 27.3 291 123-431 14-334 (416)
39 3bg1_A Protein SEC13 homolog; 100.0 6.9E-35 2.4E-39 273.9 26.4 238 191-432 15-291 (316)
40 4aow_A Guanine nucleotide-bind 100.0 1.7E-32 5.9E-37 259.1 42.4 285 115-431 32-334 (340)
41 4h5i_A Guanine nucleotide-exch 100.0 1.6E-33 5.3E-38 270.0 35.3 289 123-431 16-340 (365)
42 1k8k_C P40, ARP2/3 complex 41 100.0 2.8E-33 9.5E-38 268.0 35.9 281 120-430 7-357 (372)
43 3ei3_B DNA damage-binding prot 100.0 2.1E-33 7.1E-38 270.7 34.7 283 114-430 66-378 (383)
44 4gga_A P55CDC, cell division c 100.0 1.5E-32 5.1E-37 268.3 40.1 272 134-432 109-393 (420)
45 1r5m_A SIR4-interacting protei 100.0 1.3E-32 4.6E-37 267.6 38.9 292 116-430 40-421 (425)
46 4g56_B MGC81050 protein; prote 100.0 1E-33 3.6E-38 270.4 30.4 240 135-397 99-348 (357)
47 2pm9_A Protein WEB1, protein t 100.0 1.8E-34 6.3E-39 280.6 24.8 267 145-430 83-410 (416)
48 1erj_A Transcriptional repress 100.0 6.8E-33 2.3E-37 268.4 35.0 231 191-430 66-337 (393)
49 3vl1_A 26S proteasome regulato 100.0 1.4E-33 4.7E-38 275.1 29.7 265 144-432 71-363 (420)
50 3odt_A Protein DOA1; ubiquitin 100.0 2.9E-32 9.9E-37 254.4 37.3 279 113-431 10-293 (313)
51 1gxr_A ESG1, transducin-like e 100.0 2.6E-32 8.8E-37 257.3 37.2 233 191-430 53-292 (337)
52 4e54_B DNA damage-binding prot 100.0 1.5E-33 5E-38 276.8 28.9 283 116-430 114-426 (435)
53 4aez_A CDC20, WD repeat-contai 100.0 6.9E-32 2.4E-36 261.9 39.7 264 141-431 103-377 (401)
54 2j04_B YDR362CP, TAU91; beta p 100.0 8.3E-34 2.8E-38 283.2 26.1 290 121-431 133-514 (524)
55 3dwl_C Actin-related protein 2 100.0 1.2E-34 3.9E-39 278.7 17.7 232 191-427 13-275 (377)
56 3gre_A Serine/threonine-protei 100.0 9.2E-33 3.2E-37 271.0 30.4 292 111-430 52-436 (437)
57 3dwl_C Actin-related protein 2 100.0 9.6E-34 3.3E-38 272.3 22.6 282 119-430 9-375 (377)
58 3jrp_A Fusion protein of prote 100.0 3.3E-32 1.1E-36 260.9 33.2 237 191-431 13-284 (379)
59 1k8k_C P40, ARP2/3 complex 41 100.0 3E-32 1E-36 260.8 32.9 237 190-431 9-271 (372)
60 3vl1_A 26S proteasome regulato 100.0 7.7E-32 2.6E-36 262.7 36.3 262 143-429 111-414 (420)
61 1yfq_A Cell cycle arrest prote 100.0 4.6E-32 1.6E-36 256.6 33.6 271 120-426 10-315 (342)
62 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-32 1.1E-36 257.3 32.3 237 191-431 13-334 (351)
63 4ggc_A P55CDC, cell division c 100.0 4.5E-31 1.5E-35 247.0 38.9 268 136-430 31-311 (318)
64 3v7d_B Cell division control p 100.0 7.1E-31 2.4E-35 259.6 39.8 260 142-430 133-417 (464)
65 3zwl_B Eukaryotic translation 100.0 3.8E-31 1.3E-35 252.4 36.5 229 191-426 34-282 (369)
66 4a11_B DNA excision repair pro 100.0 2.4E-31 8.1E-36 257.5 35.2 239 191-431 45-362 (408)
67 3mmy_A MRNA export factor; mRN 100.0 1E-31 3.6E-36 256.2 32.0 237 191-431 41-343 (368)
68 2pm7_B Protein transport prote 100.0 2.3E-31 7.8E-36 247.6 33.0 249 116-392 4-285 (297)
69 3dm0_A Maltose-binding peripla 100.0 1.6E-31 5.4E-36 277.8 35.4 231 191-427 384-625 (694)
70 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-31 1.1E-35 280.2 38.0 280 115-427 7-295 (814)
71 1p22_A F-BOX/WD-repeat protein 100.0 2.2E-31 7.5E-36 261.3 34.2 256 141-431 143-411 (435)
72 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-30 5.6E-35 255.7 39.6 253 142-427 170-431 (445)
73 2j04_B YDR362CP, TAU91; beta p 100.0 1.1E-32 3.8E-37 275.1 24.2 229 198-430 172-424 (524)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 7.2E-32 2.5E-36 261.8 28.8 228 191-420 83-330 (402)
75 3dw8_B Serine/threonine-protei 100.0 2.1E-31 7E-36 261.7 32.0 286 122-425 29-438 (447)
76 1sq9_A Antiviral protein SKI8; 100.0 7.6E-32 2.6E-36 260.6 27.5 235 191-430 18-318 (397)
77 3bg1_A Protein SEC13 homolog; 100.0 1.2E-31 4.2E-36 251.7 27.2 245 119-391 11-292 (316)
78 2xyi_A Probable histone-bindin 100.0 1.9E-31 6.4E-36 261.4 29.5 239 191-431 130-407 (430)
79 4e54_B DNA damage-binding prot 100.0 1E-31 3.6E-36 263.6 27.5 228 191-422 121-363 (435)
80 4aow_A Guanine nucleotide-bind 100.0 4.1E-30 1.4E-34 242.8 37.5 255 154-430 19-282 (340)
81 3lrv_A PRE-mRNA-splicing facto 100.0 3.3E-31 1.1E-35 251.7 29.2 262 142-433 49-332 (343)
82 3dw8_B Serine/threonine-protei 100.0 2E-31 6.9E-36 261.8 28.4 235 191-430 30-369 (447)
83 3v7d_B Cell division control p 100.0 1.4E-30 4.7E-35 257.5 34.5 228 191-430 124-377 (464)
84 1r5m_A SIR4-interacting protei 100.0 2.2E-30 7.6E-35 251.9 34.2 234 191-430 47-357 (425)
85 3ei3_B DNA damage-binding prot 100.0 9.5E-31 3.3E-35 252.0 31.0 233 191-430 75-335 (383)
86 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-29 5.4E-34 248.7 39.8 255 141-430 129-387 (445)
87 3mkq_A Coatomer beta'-subunit; 100.0 1.8E-30 6.2E-35 274.3 33.6 233 191-430 15-255 (814)
88 3k26_A Polycomb protein EED; W 100.0 4.9E-31 1.7E-35 251.5 25.5 235 191-430 20-314 (366)
89 4aez_A CDC20, WD repeat-contai 100.0 1.1E-29 3.9E-34 246.3 34.9 231 191-430 95-332 (401)
90 3sfz_A APAF-1, apoptotic pepti 100.0 1.2E-29 4.2E-34 280.0 39.3 283 116-431 610-910 (1249)
91 3gre_A Serine/threonine-protei 100.0 1.1E-30 3.6E-35 256.3 27.4 234 191-430 65-355 (437)
92 3jro_A Fusion protein of prote 100.0 8.6E-31 3E-35 274.2 28.1 236 191-430 11-281 (753)
93 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-29 4.7E-34 269.2 37.6 273 134-430 62-601 (902)
94 1yfq_A Cell cycle arrest prote 100.0 2E-30 6.8E-35 245.3 27.7 234 191-430 13-278 (342)
95 3lrv_A PRE-mRNA-splicing facto 100.0 9.9E-31 3.4E-35 248.4 24.8 220 198-430 47-288 (343)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 3E-30 1E-34 250.4 28.3 226 201-430 49-295 (402)
97 3odt_A Protein DOA1; ubiquitin 100.0 3E-29 1E-33 233.9 34.1 225 191-430 20-251 (313)
98 3jrp_A Fusion protein of prote 100.0 8.8E-30 3E-34 244.0 30.8 251 115-393 5-288 (379)
99 3i2n_A WD repeat-containing pr 100.0 3.1E-30 1.1E-34 245.2 27.2 235 191-431 20-288 (357)
100 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.7E-29 2E-33 245.1 36.8 218 191-415 104-366 (450)
101 3f3f_A Nucleoporin SEH1; struc 100.0 3E-29 1E-33 236.7 33.3 255 118-399 8-344 (351)
102 4gq1_A NUP37; propeller, trans 100.0 1.3E-30 4.6E-35 252.2 24.4 225 198-426 100-382 (393)
103 3sfz_A APAF-1, apoptotic pepti 100.0 2.1E-29 7.3E-34 278.1 36.9 261 146-430 674-1030(1249)
104 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.2E-29 4E-34 250.1 30.7 193 234-430 104-335 (450)
105 1p22_A F-BOX/WD-repeat protein 100.0 4.4E-29 1.5E-33 244.8 34.1 223 191-430 135-361 (435)
106 1pgu_A Actin interacting prote 100.0 1.6E-28 5.6E-33 250.7 38.9 277 121-430 18-324 (615)
107 1pgu_A Actin interacting prote 100.0 6.4E-29 2.2E-33 253.7 33.9 278 113-428 55-360 (615)
108 4h5i_A Guanine nucleotide-exch 100.0 3.7E-29 1.3E-33 239.6 28.8 193 192-393 136-344 (365)
109 3vu4_A KMHSV2; beta-propeller 100.0 3.1E-28 1.1E-32 232.3 34.3 277 116-434 14-336 (355)
110 4a11_B DNA excision repair pro 100.0 2.6E-28 8.8E-33 236.2 33.8 293 116-430 38-401 (408)
111 4gga_A P55CDC, cell division c 100.0 4.3E-28 1.5E-32 236.7 35.4 247 136-407 153-410 (420)
112 2xyi_A Probable histone-bindin 100.0 1.9E-28 6.3E-33 240.1 31.0 252 117-393 124-411 (430)
113 2oaj_A Protein SNI1; WD40 repe 100.0 8.8E-29 3E-33 263.0 30.7 225 191-425 19-298 (902)
114 1l0q_A Surface layer protein; 100.0 5.9E-27 2E-31 226.0 38.6 251 149-428 10-269 (391)
115 3bws_A Protein LP49; two-domai 100.0 6E-27 2.1E-31 229.1 38.8 256 150-430 143-428 (433)
116 2w18_A PALB2, fancn, partner a 100.0 4.6E-28 1.6E-32 223.2 28.7 254 144-430 56-353 (356)
117 3vu4_A KMHSV2; beta-propeller 100.0 3.2E-28 1.1E-32 232.2 28.0 225 191-431 21-268 (355)
118 2j04_A TAU60, YPL007P, hypothe 100.0 5.8E-29 2E-33 243.4 23.2 227 191-430 17-293 (588)
119 2j04_A TAU60, YPL007P, hypothe 100.0 6.1E-28 2.1E-32 236.2 25.5 218 189-423 85-350 (588)
120 3jro_A Fusion protein of prote 100.0 5E-28 1.7E-32 253.3 26.2 248 117-392 5-285 (753)
121 4ggc_A P55CDC, cell division c 100.0 2.4E-26 8.3E-31 214.8 32.2 225 144-393 82-316 (318)
122 3mmy_A MRNA export factor; mRN 100.0 3E-27 1E-31 225.2 26.2 248 113-390 31-344 (368)
123 2w18_A PALB2, fancn, partner a 100.0 2.1E-26 7E-31 212.2 29.8 188 198-390 144-355 (356)
124 4gq1_A NUP37; propeller, trans 100.0 1.4E-26 4.7E-31 224.0 24.3 224 145-391 105-388 (393)
125 1l0q_A Surface layer protein; 99.9 6.7E-25 2.3E-29 211.5 33.5 214 200-423 3-219 (391)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.6E-24 5.6E-29 210.9 30.6 221 199-431 143-381 (415)
127 3bws_A Protein LP49; two-domai 99.9 4.4E-24 1.5E-28 208.7 32.7 226 192-424 125-365 (433)
128 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.3E-23 1.1E-27 201.7 34.5 236 151-416 159-410 (415)
129 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.8E-28 193.2 29.0 250 150-426 21-294 (297)
130 3vgz_A Uncharacterized protein 99.9 1.2E-21 4.1E-26 185.7 38.3 268 134-427 44-337 (353)
131 1nir_A Nitrite reductase; hemo 99.9 5E-22 1.7E-26 199.5 34.4 269 133-423 181-498 (543)
132 1ri6_A Putative isomerase YBHE 99.9 1.2E-21 4E-26 184.8 32.8 233 192-429 40-303 (343)
133 3u4y_A Uncharacterized protein 99.9 3.4E-21 1.2E-25 181.1 35.8 262 139-426 6-295 (331)
134 1nir_A Nitrite reductase; hemo 99.9 1.1E-20 3.6E-25 189.9 33.5 246 149-422 157-439 (543)
135 1pby_B Quinohemoprotein amine 99.9 9.2E-21 3.1E-25 178.1 29.8 218 200-428 2-304 (337)
136 2oit_A Nucleoporin 214KDA; NH2 99.9 1.7E-21 5.6E-26 190.5 24.3 229 192-426 41-324 (434)
137 2z3z_A Dipeptidyl aminopeptida 99.9 2.1E-20 7.2E-25 194.3 31.7 261 136-425 87-422 (706)
138 2ecf_A Dipeptidyl peptidase IV 99.9 3.9E-21 1.3E-25 201.0 25.8 231 191-430 38-363 (741)
139 2ojh_A Uncharacterized protein 99.9 5.7E-21 2E-25 175.7 23.9 212 204-425 17-238 (297)
140 3vgz_A Uncharacterized protein 99.9 7.2E-20 2.5E-24 173.4 31.8 223 192-423 43-291 (353)
141 2ecf_A Dipeptidyl peptidase IV 99.9 9.6E-21 3.3E-25 198.0 28.0 262 152-425 65-401 (741)
142 3hfq_A Uncharacterized protein 99.9 1.3E-19 4.3E-24 171.8 32.9 228 194-425 46-307 (347)
143 2oit_A Nucleoporin 214KDA; NH2 99.9 1.1E-21 3.9E-26 191.7 17.6 188 234-427 38-265 (434)
144 1xfd_A DIP, dipeptidyl aminope 99.9 6.2E-21 2.1E-25 198.8 24.0 267 138-425 24-381 (723)
145 2z3z_A Dipeptidyl aminopeptida 99.9 4.4E-20 1.5E-24 191.9 29.4 274 136-425 31-377 (706)
146 1jmx_B Amine dehydrogenase; ox 99.9 6.5E-20 2.2E-24 173.3 26.4 217 198-427 10-318 (349)
147 3u4y_A Uncharacterized protein 99.9 2.4E-19 8.2E-24 168.5 30.1 217 198-422 9-239 (331)
148 1k32_A Tricorn protease; prote 99.9 1.2E-19 4.1E-24 196.6 31.9 223 192-427 249-495 (1045)
149 1ri6_A Putative isomerase YBHE 99.9 1.1E-18 3.6E-23 164.4 34.2 260 135-416 42-335 (343)
150 3o4h_A Acylamino-acid-releasin 99.9 1.1E-19 3.6E-24 184.8 26.4 227 191-434 66-312 (582)
151 1xfd_A DIP, dipeptidyl aminope 99.9 2.5E-20 8.5E-25 194.3 22.2 221 192-421 19-323 (723)
152 3scy_A Hypothetical bacterial 99.9 2.9E-18 9.8E-23 163.4 34.1 259 135-412 54-360 (361)
153 1pby_B Quinohemoprotein amine 99.8 2.1E-18 7.2E-23 161.9 31.9 231 148-403 8-321 (337)
154 3scy_A Hypothetical bacterial 99.8 4E-18 1.4E-22 162.4 34.2 225 194-424 56-326 (361)
155 3o4h_A Acylamino-acid-releasin 99.8 5.4E-20 1.9E-24 186.9 21.5 228 190-431 22-273 (582)
156 1k32_A Tricorn protease; prote 99.8 8.9E-19 3E-23 189.8 31.9 265 133-428 298-631 (1045)
157 3hfq_A Uncharacterized protein 99.8 9.6E-18 3.3E-22 158.8 32.1 241 136-396 45-323 (347)
158 1jmx_B Amine dehydrogenase; ox 99.8 1.4E-17 4.8E-22 157.2 29.4 228 148-402 18-335 (349)
159 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.7E-17 5.7E-22 158.5 29.5 232 192-428 42-335 (365)
160 1z68_A Fibroblast activation p 99.8 1.2E-19 4.2E-24 189.0 15.7 215 198-421 26-329 (719)
161 3pe7_A Oligogalacturonate lyas 99.8 1.6E-17 5.5E-22 159.5 27.2 225 194-425 87-372 (388)
162 1z68_A Fibroblast activation p 99.8 1.7E-18 5.8E-23 180.4 20.3 264 135-424 20-376 (719)
163 4a5s_A Dipeptidyl peptidase 4 99.8 5.5E-18 1.9E-22 177.1 22.3 226 192-424 19-340 (740)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 5.8E-16 2E-20 147.8 28.7 221 201-425 4-276 (365)
165 3fvz_A Peptidyl-glycine alpha- 99.7 1.1E-15 3.6E-20 143.8 28.1 234 191-432 25-320 (329)
166 2oiz_A Aromatic amine dehydrog 99.7 2.6E-15 9E-20 142.9 31.0 242 150-416 30-360 (361)
167 3c5m_A Oligogalacturonate lyas 99.7 2.8E-16 9.5E-21 151.1 24.3 231 194-433 87-380 (396)
168 1q7f_A NHL, brain tumor CG1071 99.7 3.1E-15 1.1E-19 137.4 30.4 231 191-430 31-276 (286)
169 3azo_A Aminopeptidase; POP fam 99.7 2.5E-16 8.6E-21 162.3 24.9 235 191-430 25-319 (662)
170 4a5s_A Dipeptidyl peptidase 4 99.7 3.5E-15 1.2E-19 155.8 31.3 266 133-423 19-382 (740)
171 3e5z_A Putative gluconolactona 99.7 4.3E-15 1.5E-19 137.3 28.0 220 192-425 30-278 (296)
172 2dg1_A DRP35, lactonase; beta 99.7 8.8E-14 3E-18 130.6 35.0 234 192-434 47-313 (333)
173 2gop_A Trilobed protease; beta 99.7 9.3E-15 3.2E-19 138.0 25.7 217 191-430 16-288 (347)
174 2gop_A Trilobed protease; beta 99.7 2.5E-14 8.7E-19 135.0 28.5 237 150-433 42-329 (347)
175 3pe7_A Oligogalacturonate lyas 99.7 6.6E-15 2.2E-19 141.2 24.8 220 195-423 43-309 (388)
176 3azo_A Aminopeptidase; POP fam 99.7 9.2E-15 3.2E-19 150.6 26.2 214 197-419 88-350 (662)
177 3no2_A Uncharacterized protein 99.7 5.3E-14 1.8E-18 128.5 27.5 211 198-421 4-230 (276)
178 3dsm_A Uncharacterized protein 99.7 1.4E-13 4.6E-18 129.3 30.3 218 192-422 46-285 (328)
179 1rwi_B Serine/threonine-protei 99.7 4E-14 1.4E-18 128.6 24.9 231 192-430 26-260 (270)
180 1q7f_A NHL, brain tumor CG1071 99.7 7.5E-13 2.6E-17 121.4 33.1 192 191-393 78-281 (286)
181 2oiz_A Aromatic amine dehydrog 99.6 3.7E-14 1.3E-18 134.9 24.9 209 207-428 29-328 (361)
182 2xdw_A Prolyl endopeptidase; a 99.6 6.6E-13 2.3E-17 137.9 34.3 224 191-422 126-398 (710)
183 3fvz_A Peptidyl-glycine alpha- 99.6 1.8E-13 6.2E-18 128.5 27.0 218 151-392 69-322 (329)
184 2xdw_A Prolyl endopeptidase; a 99.6 2.2E-13 7.6E-18 141.5 27.1 192 234-428 126-360 (710)
185 3e5z_A Putative gluconolactona 99.6 2.7E-12 9.3E-17 118.3 31.0 216 149-394 48-288 (296)
186 1qks_A Cytochrome CD1 nitrite 99.6 3.9E-12 1.3E-16 127.5 34.0 250 149-424 175-523 (567)
187 3c5m_A Oligogalacturonate lyas 99.6 2.3E-14 8E-19 137.5 16.8 217 195-423 43-302 (396)
188 3dsm_A Uncharacterized protein 99.6 2.8E-12 9.7E-17 120.2 30.7 240 143-412 54-320 (328)
189 2dg1_A DRP35, lactonase; beta 99.6 7.4E-13 2.5E-17 124.2 24.9 225 192-427 8-256 (333)
190 2z2n_A Virginiamycin B lyase; 99.6 6E-11 2.1E-15 108.9 37.4 219 191-421 58-283 (299)
191 1xip_A Nucleoporin NUP159; bet 99.6 1.9E-13 6.5E-18 129.6 19.1 171 234-421 39-231 (388)
192 3g4e_A Regucalcin; six bladed 99.6 6.9E-12 2.3E-16 115.8 29.2 217 198-425 24-263 (297)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 4.7E-12 1.6E-16 117.4 27.0 226 192-424 20-288 (314)
194 2z2n_A Virginiamycin B lyase; 99.5 2.9E-11 9.9E-16 111.0 31.7 218 191-420 16-241 (299)
195 3no2_A Uncharacterized protein 99.5 8.6E-13 2.9E-17 120.5 20.8 171 249-426 7-187 (276)
196 3hrp_A Uncharacterized protein 99.5 2.8E-11 9.7E-16 116.9 32.1 227 191-429 132-405 (409)
197 1rwi_B Serine/threonine-protei 99.5 5E-12 1.7E-16 114.6 24.4 195 192-394 69-266 (270)
198 1qks_A Cytochrome CD1 nitrite 99.5 4.3E-11 1.5E-15 120.0 32.9 215 198-421 166-406 (567)
199 2bkl_A Prolyl endopeptidase; m 99.5 5.6E-12 1.9E-16 130.6 27.3 221 191-423 122-382 (695)
200 2bkl_A Prolyl endopeptidase; m 99.5 3.2E-12 1.1E-16 132.4 24.9 228 196-430 76-345 (695)
201 1yr2_A Prolyl oligopeptidase; 99.5 6.9E-12 2.4E-16 130.9 26.1 234 192-430 111-389 (741)
202 2qc5_A Streptogramin B lactona 99.5 4.2E-10 1.4E-14 103.2 35.0 221 191-423 63-290 (300)
203 2ghs_A AGR_C_1268P; regucalcin 99.5 1.1E-10 3.7E-15 109.3 29.9 213 199-425 61-293 (326)
204 2qc5_A Streptogramin B lactona 99.5 2.3E-10 7.9E-15 105.0 31.6 219 191-421 21-247 (300)
205 3dr2_A Exported gluconolactona 99.4 9.2E-11 3.2E-15 108.6 25.7 216 193-424 48-297 (305)
206 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 2.4E-10 8.2E-15 105.8 28.3 220 149-392 44-299 (314)
207 1yr2_A Prolyl oligopeptidase; 99.4 1E-10 3.4E-15 122.1 28.5 223 191-423 164-426 (741)
208 1xip_A Nucleoporin NUP159; bet 99.4 7.6E-12 2.6E-16 118.6 18.0 171 191-378 39-230 (388)
209 2mad_H Methylamine dehydrogena 99.4 1.9E-09 6.4E-14 102.6 34.4 226 194-427 72-343 (373)
210 2qe8_A Uncharacterized protein 99.4 1.9E-10 6.6E-15 108.4 25.8 231 191-425 18-312 (343)
211 3g4e_A Regucalcin; six bladed 99.4 2.1E-09 7.3E-14 99.0 30.4 219 136-381 18-261 (297)
212 3sjl_D Methylamine dehydrogena 99.3 1.2E-09 4.1E-14 103.1 27.9 249 151-423 59-351 (386)
213 2mad_H Methylamine dehydrogena 99.3 6.9E-09 2.4E-13 98.7 33.4 245 135-400 70-358 (373)
214 3c75_H MADH, methylamine dehyd 99.3 9E-10 3.1E-14 105.8 26.0 253 151-427 99-395 (426)
215 2hz6_A Endoplasmic reticulum t 99.3 1.2E-12 4.2E-17 124.8 5.5 203 197-416 7-216 (369)
216 2ece_A 462AA long hypothetical 99.3 1.8E-09 6.2E-14 102.7 26.9 220 198-422 94-399 (462)
217 2ghs_A AGR_C_1268P; regucalcin 99.3 1.1E-08 3.9E-13 95.5 31.7 217 136-382 54-292 (326)
218 3sjl_D Methylamine dehydrogena 99.3 2.4E-09 8.1E-14 101.1 26.5 257 135-414 82-384 (386)
219 3iuj_A Prolyl endopeptidase; h 99.2 1.2E-09 4.1E-14 112.9 24.3 188 234-427 130-349 (693)
220 3hrp_A Uncharacterized protein 99.2 1.3E-08 4.4E-13 98.2 29.3 225 141-390 140-408 (409)
221 3dr2_A Exported gluconolactona 99.2 8.9E-09 3.1E-13 95.1 26.3 188 191-389 87-303 (305)
222 3iuj_A Prolyl endopeptidase; h 99.2 3.5E-09 1.2E-13 109.5 25.6 222 191-424 130-391 (693)
223 3c75_H MADH, methylamine dehyd 99.2 6.5E-09 2.2E-13 99.9 24.3 245 135-399 122-409 (426)
224 3hxj_A Pyrrolo-quinoline quino 99.2 7.7E-09 2.6E-13 96.3 24.1 212 199-429 107-319 (330)
225 2iwa_A Glutamine cyclotransfer 99.2 1.2E-08 4.1E-13 91.3 23.8 186 234-426 22-228 (266)
226 3nol_A Glutamine cyclotransfer 99.1 1E-08 3.5E-13 90.7 22.0 185 232-425 42-246 (262)
227 1fwx_A Nitrous oxide reductase 99.1 5.4E-09 1.8E-13 102.9 22.3 220 198-422 100-406 (595)
228 1yiq_A Quinohemoprotein alcoho 99.1 6.5E-08 2.2E-12 99.6 31.5 260 143-419 122-533 (689)
229 1kb0_A Quinohemoprotein alcoho 99.1 1.8E-08 6.3E-13 103.4 26.4 262 142-420 128-536 (677)
230 1npe_A Nidogen, entactin; glyc 99.1 4.9E-07 1.7E-11 81.5 33.0 216 191-416 37-263 (267)
231 2hz6_A Endoplasmic reticulum t 99.1 1.8E-11 6.2E-16 116.6 1.4 169 249-426 11-184 (369)
232 2ece_A 462AA long hypothetical 99.1 2.3E-08 7.8E-13 95.2 22.3 180 244-425 93-342 (462)
233 1mda_H Methylamine dehydrogena 99.1 1.1E-08 3.9E-13 96.5 20.0 215 201-427 34-339 (368)
234 1kb0_A Quinohemoprotein alcoho 99.1 5.5E-08 1.9E-12 99.9 26.7 226 195-427 124-500 (677)
235 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.2E-07 4.1E-12 90.2 27.5 254 142-427 103-371 (376)
236 3nok_A Glutaminyl cyclase; bet 99.1 3.7E-08 1.3E-12 87.0 21.3 182 232-423 54-254 (268)
237 3mbr_X Glutamine cyclotransfer 99.0 1.5E-07 5E-12 82.6 24.5 186 230-424 18-224 (243)
238 3q7m_A Lipoprotein YFGL, BAMB; 99.0 6.5E-07 2.2E-11 85.1 30.8 258 143-425 54-328 (376)
239 1fwx_A Nitrous oxide reductase 99.0 3.7E-08 1.3E-12 97.0 22.0 217 202-421 18-347 (595)
240 1mda_H Methylamine dehydrogena 99.0 1.1E-07 3.7E-12 89.8 24.2 235 152-413 47-366 (368)
241 1yiq_A Quinohemoprotein alcoho 99.0 1E-07 3.6E-12 98.1 25.5 225 196-427 118-498 (689)
242 2iwa_A Glutamine cyclotransfer 99.0 3.3E-07 1.1E-11 81.9 24.0 193 192-393 23-238 (266)
243 3hxj_A Pyrrolo-quinoline quino 98.9 7E-08 2.4E-12 89.7 19.4 213 191-425 61-275 (330)
244 3nol_A Glutamine cyclotransfer 98.9 1.8E-07 6.1E-12 82.7 20.5 180 192-381 45-244 (262)
245 2p4o_A Hypothetical protein; p 98.9 3.2E-06 1.1E-10 77.9 28.6 222 192-425 34-279 (306)
246 2qe8_A Uncharacterized protein 98.9 1.4E-07 4.8E-12 88.6 19.3 195 191-388 68-317 (343)
247 3nok_A Glutaminyl cyclase; bet 98.9 4.2E-07 1.4E-11 80.3 20.4 178 192-380 57-253 (268)
248 1npe_A Nidogen, entactin; glyc 98.9 3.7E-06 1.3E-10 75.7 27.5 217 200-424 2-227 (267)
249 1kv9_A Type II quinohemoprotei 98.8 1.5E-06 5.1E-11 89.1 25.9 261 143-421 118-519 (668)
250 3mbr_X Glutamine cyclotransfer 98.8 2.6E-06 8.9E-11 74.6 23.5 180 192-381 23-223 (243)
251 3v65_B Low-density lipoprotein 98.8 3E-05 1E-09 73.9 32.7 244 142-411 87-337 (386)
252 3v64_C Agrin; beta propeller, 98.8 4.9E-05 1.7E-09 71.3 33.4 213 192-411 75-294 (349)
253 2fp8_A Strictosidine synthase; 98.7 1.2E-05 4E-10 74.6 26.5 220 194-423 23-301 (322)
254 2ad6_A Methanol dehydrogenase 98.7 1E-05 3.5E-10 81.3 27.1 167 257-426 272-528 (571)
255 2ad6_A Methanol dehydrogenase 98.7 1.8E-05 6.1E-10 79.5 28.5 223 196-426 112-486 (571)
256 3qqz_A Putative uncharacterize 98.7 1.6E-05 5.3E-10 70.6 24.6 193 227-424 21-243 (255)
257 1kv9_A Type II quinohemoprotei 98.7 5.8E-06 2E-10 84.7 25.0 224 196-426 114-480 (668)
258 4a2l_A BT_4663, two-component 98.6 8.8E-05 3E-09 77.8 34.1 219 189-419 309-558 (795)
259 4a2l_A BT_4663, two-component 98.6 0.00024 8.3E-09 74.4 36.9 218 190-420 263-514 (795)
260 1ijq_A LDL receptor, low-densi 98.6 0.00035 1.2E-08 64.4 34.6 202 192-401 32-247 (316)
261 2xe4_A Oligopeptidase B; hydro 98.6 4E-06 1.4E-10 87.3 21.4 181 241-426 180-390 (751)
262 3p5b_L Low density lipoprotein 98.6 0.00063 2.1E-08 65.0 35.8 245 144-411 85-339 (400)
263 3sov_A LRP-6, low-density lipo 98.5 0.00031 1E-08 64.9 31.0 214 191-410 36-256 (318)
264 1k3i_A Galactose oxidase precu 98.5 1E-05 3.5E-10 82.9 22.6 226 194-423 192-530 (656)
265 1flg_A Protein (quinoprotein e 98.5 0.00013 4.5E-09 73.3 30.0 160 197-358 115-363 (582)
266 3v64_C Agrin; beta propeller, 98.5 0.00024 8.1E-09 66.6 29.1 213 200-423 45-263 (349)
267 1w6s_A Methanol dehydrogenase 98.5 0.00012 4.3E-09 73.5 28.6 150 202-358 124-350 (599)
268 1flg_A Protein (quinoprotein e 98.5 4.5E-05 1.5E-09 76.7 25.3 159 257-417 291-542 (582)
269 2fp8_A Strictosidine synthase; 98.5 0.00017 5.7E-09 66.7 27.2 194 192-392 82-313 (322)
270 3v65_B Low-density lipoprotein 98.5 0.00012 4E-09 69.8 26.2 213 200-423 88-306 (386)
271 3m0c_C LDL receptor, low-densi 98.4 0.00071 2.4E-08 70.2 33.0 206 191-401 425-641 (791)
272 3tc9_A Hypothetical hydrolase; 98.4 0.00017 5.9E-09 69.6 26.9 216 199-423 149-418 (430)
273 3v9f_A Two-component system se 98.4 0.00074 2.5E-08 70.6 33.5 223 188-420 311-555 (781)
274 3v9f_A Two-component system se 98.4 0.00047 1.6E-08 72.0 31.0 222 191-423 259-513 (781)
275 1ijq_A LDL receptor, low-densi 98.4 0.00021 7.2E-09 65.9 24.9 166 255-422 8-182 (316)
276 1w6s_A Methanol dehydrogenase 98.4 6.2E-05 2.1E-09 75.7 22.4 196 199-400 62-350 (599)
277 3qqz_A Putative uncharacterize 98.3 0.00052 1.8E-08 60.8 25.2 191 191-390 28-251 (255)
278 4hw6_A Hypothetical protein, I 98.3 0.00038 1.3E-08 67.2 26.1 227 193-428 142-427 (433)
279 2p4o_A Hypothetical protein; p 98.3 0.00022 7.5E-09 65.4 22.4 179 235-422 34-229 (306)
280 3p5b_L Low density lipoprotein 98.3 0.0027 9.4E-08 60.5 30.7 211 201-423 85-308 (400)
281 3amr_A 3-phytase; beta-propell 98.2 0.00038 1.3E-08 64.1 22.8 188 249-442 42-268 (355)
282 2xe4_A Oligopeptidase B; hydro 98.2 0.00016 5.3E-09 75.3 23.0 189 193-390 179-398 (751)
283 3sov_A LRP-6, low-density lipo 98.2 0.0015 5.2E-08 60.1 26.1 205 208-421 12-224 (318)
284 3amr_A 3-phytase; beta-propell 98.1 0.0037 1.3E-07 57.6 26.6 150 208-358 98-272 (355)
285 3kya_A Putative phosphatase; s 98.1 0.0014 4.9E-08 63.7 25.2 227 199-430 152-471 (496)
286 3m0c_C LDL receptor, low-densi 98.1 0.0038 1.3E-07 64.7 29.5 212 201-423 397-620 (791)
287 3tc9_A Hypothetical hydrolase; 98.1 0.00032 1.1E-08 67.8 20.1 144 278-423 138-289 (430)
288 1n7d_A LDL receptor, low-densi 98.1 2.5E-05 8.5E-10 80.4 12.6 215 193-412 409-634 (699)
289 4a0p_A LRP6, LRP-6, low-densit 98.0 0.015 5.1E-07 58.8 34.1 199 192-399 39-244 (628)
290 2p9w_A MAL S 1 allergenic prot 98.0 0.0015 5.3E-08 59.6 22.0 155 235-393 15-216 (334)
291 4a0p_A LRP6, LRP-6, low-densit 98.0 0.014 4.8E-07 59.0 30.8 213 201-423 8-225 (628)
292 4hw6_A Hypothetical protein, I 98.0 0.00074 2.5E-08 65.2 20.4 150 236-391 142-303 (433)
293 2xbg_A YCF48-like protein; pho 97.9 0.013 4.5E-07 54.0 29.5 222 191-427 81-315 (327)
294 3s94_A LRP-6, low-density lipo 97.9 0.012 4E-07 59.5 28.5 200 192-398 42-249 (619)
295 2p9w_A MAL S 1 allergenic prot 97.8 0.012 4.1E-07 53.7 24.4 195 194-392 17-265 (334)
296 2ism_A Putative oxidoreductase 97.8 0.0058 2E-07 57.1 23.1 221 192-421 33-332 (352)
297 1k3i_A Galactose oxidase precu 97.8 0.0014 4.9E-08 66.9 20.0 93 287-381 410-530 (656)
298 2xzh_A Clathrin heavy chain 1; 97.8 0.021 7.2E-07 51.8 27.3 129 208-348 48-188 (365)
299 3s25_A Hypothetical 7-bladed b 97.7 0.024 8.2E-07 51.6 26.0 204 192-424 57-282 (302)
300 3sre_A PON1, serum paraoxonase 97.7 0.013 4.4E-07 54.5 23.7 207 207-418 81-328 (355)
301 3pbp_A Nucleoporin NUP82; beta 97.7 0.0022 7.5E-08 60.3 17.6 142 243-388 29-208 (452)
302 3a9g_A Putative uncharacterize 97.7 0.038 1.3E-06 51.5 27.5 223 192-423 31-330 (354)
303 3sre_A PON1, serum paraoxonase 97.6 0.017 5.7E-07 53.8 22.9 167 255-424 81-287 (355)
304 3kya_A Putative phosphatase; s 97.6 0.0077 2.6E-07 58.6 21.2 151 236-390 142-339 (496)
305 2xbg_A YCF48-like protein; pho 97.6 0.04 1.4E-06 50.7 26.3 220 191-425 37-270 (327)
306 2vpj_A Kelch-like protein 12; 97.6 0.019 6.5E-07 52.0 22.2 188 194-394 58-280 (301)
307 1n7d_A LDL receptor, low-densi 97.5 0.00024 8.2E-09 73.1 9.8 166 255-423 384-559 (699)
308 2vpj_A Kelch-like protein 12; 97.5 0.0075 2.6E-07 54.7 18.7 215 197-426 13-265 (301)
309 3ii7_A Kelch-like protein 7; p 97.5 0.047 1.6E-06 49.5 23.5 188 194-394 51-274 (306)
310 2xn4_A Kelch-like protein 2; s 97.4 0.051 1.8E-06 49.1 23.4 187 195-394 58-278 (302)
311 4asc_A Kelch repeat and BTB do 97.4 0.04 1.4E-06 50.3 22.7 186 195-394 42-279 (315)
312 2xn4_A Kelch-like protein 2; s 97.4 0.014 4.8E-07 52.9 19.4 216 197-426 14-263 (302)
313 1tl2_A L10, protein (tachylect 97.3 0.0047 1.6E-07 52.7 13.3 165 249-421 6-199 (236)
314 3ii7_A Kelch-like protein 7; p 97.3 0.025 8.6E-07 51.3 19.1 212 199-425 12-258 (306)
315 1bpo_A Protein (clathrin); cla 97.3 0.14 4.6E-06 48.4 27.7 192 198-400 76-297 (494)
316 4asc_A Kelch repeat and BTB do 97.3 0.033 1.1E-06 50.9 19.7 209 201-425 7-254 (315)
317 1zgk_A Kelch-like ECH-associat 97.2 0.013 4.3E-07 53.5 16.4 217 192-425 18-273 (308)
318 2woz_A Kelch repeat and BTB do 97.2 0.06 2.1E-06 49.1 20.5 187 196-395 54-290 (318)
319 2be1_A Serine/threonine-protei 97.2 0.0017 6E-08 59.9 9.7 193 199-397 10-236 (339)
320 3pbp_A Nucleoporin NUP82; beta 97.1 0.045 1.6E-06 51.5 19.1 140 286-427 30-205 (452)
321 2xzh_A Clathrin heavy chain 1; 97.1 0.16 5.3E-06 46.2 24.9 192 140-349 115-332 (365)
322 3sbq_A Nitrous-oxide reductase 97.1 0.25 8.6E-06 48.1 24.0 218 198-421 141-452 (638)
323 2ism_A Putative oxidoreductase 97.1 0.11 3.6E-06 48.4 21.4 138 235-379 33-220 (352)
324 2uvk_A YJHT; unknown function, 97.1 0.042 1.4E-06 51.1 18.6 223 196-426 17-328 (357)
325 1zgk_A Kelch-like ECH-associat 97.0 0.1 3.5E-06 47.3 20.2 186 196-394 68-289 (308)
326 2g8s_A Glucose/sorbosone dehyd 96.9 0.25 8.4E-06 45.9 26.3 223 192-419 20-338 (353)
327 3ei3_A DNA damage-binding prot 96.9 0.32 1.1E-05 52.7 25.9 221 209-435 807-1063(1158)
328 2zwa_A Leucine carboxyl methyl 96.9 0.13 4.4E-06 52.7 21.9 224 197-424 396-675 (695)
329 1cru_A Protein (soluble quinop 96.9 0.21 7.2E-06 48.2 22.3 103 278-380 28-162 (454)
330 3s94_A LRP-6, low-density lipo 96.9 0.47 1.6E-05 47.8 33.7 209 191-409 350-567 (619)
331 1bpo_A Protein (clathrin); cla 96.8 0.33 1.1E-05 45.9 27.1 191 141-349 115-331 (494)
332 3s25_A Hypothetical 7-bladed b 96.8 0.12 4E-06 47.0 18.9 165 244-425 23-205 (302)
333 3das_A Putative oxidoreductase 96.8 0.11 3.7E-06 48.1 18.7 163 277-441 32-239 (347)
334 2woz_A Kelch repeat and BTB do 96.8 0.11 3.9E-06 47.3 18.7 182 199-394 16-233 (318)
335 2g8s_A Glucose/sorbosone dehyd 96.5 0.097 3.3E-06 48.7 16.3 145 278-423 19-216 (353)
336 3ott_A Two-component system se 96.5 1 3.4E-05 46.5 30.2 250 140-422 71-341 (758)
337 1tl2_A L10, protein (tachylect 96.5 0.1 3.5E-06 44.5 14.4 140 234-385 42-203 (236)
338 3ott_A Two-component system se 96.4 1 3.5E-05 46.4 27.5 214 190-422 22-249 (758)
339 3das_A Putative oxidoreductase 96.3 0.68 2.3E-05 42.7 27.9 224 192-421 34-325 (347)
340 2uvk_A YJHT; unknown function, 96.2 0.18 6.1E-06 46.7 16.3 139 257-398 168-348 (357)
341 1xi4_A Clathrin heavy chain; a 96.2 0.62 2.1E-05 50.8 21.5 189 199-398 77-295 (1630)
342 3ei3_A DNA damage-binding prot 96.0 2.3 7.9E-05 46.1 35.5 226 191-424 515-757 (1158)
343 1cru_A Protein (soluble quinop 95.7 0.65 2.2E-05 44.7 18.4 100 235-337 29-162 (454)
344 1xi4_A Clathrin heavy chain; a 94.9 0.43 1.5E-05 51.9 14.9 190 141-348 115-330 (1630)
345 2zwa_A Leucine carboxyl methyl 94.5 4.9 0.00017 41.0 22.3 152 193-349 444-635 (695)
346 2be1_A Serine/threonine-protei 94.1 0.24 8.2E-06 45.6 9.6 110 249-359 12-139 (339)
347 3sbq_A Nitrous-oxide reductase 93.2 0.75 2.6E-05 44.9 11.5 121 258-380 299-453 (638)
348 3a9g_A Putative uncharacterize 91.8 7.7 0.00026 35.7 29.4 62 319-380 259-330 (354)
349 2wg3_C Hedgehog-interacting pr 90.5 6.6 0.00023 37.7 15.0 107 319-426 14-160 (463)
350 3q6k_A 43.2 kDa salivary prote 89.8 13 0.00043 34.6 23.4 162 258-421 124-341 (381)
351 3b7f_A Glycosyl hydrolase, BNR 88.2 16 0.00055 33.8 25.5 216 199-422 22-297 (394)
352 2wg3_C Hedgehog-interacting pr 84.7 29 0.00098 33.2 26.4 142 278-422 140-354 (463)
353 3qhy_B Beta-lactamase inhibito 83.9 22 0.00076 31.3 15.8 180 191-392 25-207 (282)
354 3qhy_B Beta-lactamase inhibito 82.8 24 0.00084 31.0 18.1 198 191-414 64-264 (282)
355 4gq2_M Nucleoporin NUP120; bet 82.2 34 0.0012 36.2 16.1 36 238-274 239-274 (950)
356 4a9v_A PHOX; hydrolase, beta-p 81.9 6.9 0.00023 38.4 9.7 63 363-425 477-552 (592)
357 3zwu_A Alkaline phosphatase PH 81.3 5 0.00017 39.7 8.7 61 364-424 478-551 (592)
358 3b7f_A Glycosyl hydrolase, BNR 78.5 41 0.0014 31.0 21.7 132 278-412 233-391 (394)
359 4fhn_B Nucleoporin NUP120; pro 73.8 90 0.0031 33.7 16.6 37 363-399 239-275 (1139)
360 3q6k_A 43.2 kDa salivary prote 72.9 59 0.002 30.1 22.3 171 210-380 124-342 (381)
361 4gq2_M Nucleoporin NUP120; bet 71.7 1.1E+02 0.0036 32.4 22.3 37 320-357 237-273 (950)
362 1suu_A DNA gyrase subunit A; t 68.4 66 0.0023 28.7 24.2 188 198-391 7-230 (312)
363 1suu_A DNA gyrase subunit A; t 64.1 80 0.0027 28.2 19.5 176 249-427 10-224 (312)
364 3uc1_A DNA gyrase subunit A; D 62.3 89 0.0031 28.1 21.8 190 198-391 52-278 (327)
365 2cn3_A Xyloglucanase, beta-1,4 58.7 1.6E+02 0.0055 29.9 18.0 102 278-380 24-151 (737)
366 1sqj_A OXG-RCBH, oligoxylogluc 57.7 1.7E+02 0.0059 29.9 22.6 142 191-339 16-190 (789)
367 4fhn_B Nucleoporin NUP120; pro 57.7 32 0.0011 37.2 9.2 31 243-274 246-276 (1139)
368 4a9v_A PHOX; hydrolase, beta-p 57.1 53 0.0018 32.2 9.6 61 278-338 477-550 (592)
369 1sqj_A OXG-RCBH, oligoxylogluc 56.5 1.8E+02 0.0062 29.8 22.3 147 232-382 14-190 (789)
370 3zwu_A Alkaline phosphatase PH 55.7 41 0.0014 33.3 8.7 59 279-337 478-549 (592)
371 4hvt_A Ritya.17583.B, post-pro 53.1 2E+02 0.0067 29.2 23.8 222 191-421 133-413 (711)
372 4hvt_A Ritya.17583.B, post-pro 52.7 2E+02 0.0068 29.1 20.1 179 243-426 138-371 (711)
373 3f7f_A Nucleoporin NUP120; nuc 51.5 79 0.0027 32.0 10.0 85 136-222 166-254 (729)
374 3no0_A DNA gyrase subunit A; D 49.9 1.3E+02 0.0045 26.2 17.7 141 249-391 82-245 (276)
375 4d9s_A UVB-resistance protein 46.1 1.8E+02 0.0062 26.8 27.3 237 137-391 21-304 (406)
376 1wp5_A Topoisomerase IV; broke 44.5 1.7E+02 0.006 26.1 20.9 188 198-392 4-225 (323)
377 3f7f_A Nucleoporin NUP120; nuc 44.4 39 0.0013 34.1 6.6 37 362-400 222-258 (729)
378 3no0_A DNA gyrase subunit A; D 41.3 1.8E+02 0.0061 25.3 17.5 145 198-348 79-245 (276)
379 3uc1_A DNA gyrase subunit A; D 39.3 2.1E+02 0.0072 25.6 22.0 153 191-347 96-277 (327)
380 1zi0_A DNA gyrase subunit A; b 39.1 2E+02 0.007 25.4 25.3 187 199-391 3-225 (307)
381 2cn3_A Xyloglucanase, beta-1,4 37.9 3.3E+02 0.011 27.5 23.2 227 191-424 24-322 (737)
382 1zi0_A DNA gyrase subunit A; b 36.8 2.2E+02 0.0076 25.1 19.8 177 249-428 5-220 (307)
383 3l6v_A GYRA, DNA gyrase subuni 35.2 2.6E+02 0.009 25.5 19.6 185 244-430 5-261 (370)
384 4d9s_A UVB-resistance protein 30.8 3.2E+02 0.011 25.1 28.0 191 190-391 121-356 (406)
385 3kci_A Probable E3 ubiquitin-p 22.3 4.4E+02 0.015 23.9 28.1 193 191-390 54-291 (389)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=6e-41 Score=315.87 Aligned_cols=287 Identities=14% Similarity=0.129 Sum_probs=244.5
Q ss_pred eeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEE
Q 013282 117 FRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLA 196 (446)
Q Consensus 117 f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~ 196 (446)
.+.|...|.++.+.+... ..+...+....|+.|++|+..+++......+.||.. .|.+++
T Consensus 28 ~~~H~~~V~~v~~~~~~~----~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~----------------~v~~~~ 87 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKK----ENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQL----------------GVVSVD 87 (321)
T ss_dssp TTSSSSCEEEEEEC-----------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSS----------------CEEEEE
T ss_pred cccCCCcEEEEEEecCCC----CCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCC----------------CEEEEE
Confidence 344555666665554311 012234445668899999987765555556776643 488888
Q ss_pred e--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee
Q 013282 197 V--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (446)
Q Consensus 197 ~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (446)
+ ++.++++|+.||+|++|++.+... ...+..+...+.++.+ +|++. +|++++.||.|++|++.+++....+.
T Consensus 88 ~~~~~~~l~s~s~D~~i~lWd~~~~~~---~~~~~~~~~~~~~~~~--spdg~-~l~~g~~dg~v~i~~~~~~~~~~~~~ 161 (321)
T 3ow8_A 88 ISHTLPIAASSSLDAHIRLWDLENGKQ---IKSIDAGPVDAWTLAF--SPDSQ-YLATGTHVGKVNIFGVESGKKEYSLD 161 (321)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEE---EEEEECCTTCCCCEEE--CTTSS-EEEEECTTSEEEEEETTTCSEEEEEE
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCCE---EEEEeCCCccEEEEEE--CCCCC-EEEEEcCCCcEEEEEcCCCceeEEec
Confidence 8 789999999999999999987743 3455566777777777 99998 69999999999999999998887777
Q ss_pred -CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcc
Q 013282 275 -FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 353 (446)
Q Consensus 275 -~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~ 353 (446)
+...|.+++|+|++++|++|+.|+.|++||+++++.+..+.+|..+|.+++|+|++++|++|+.|++|++||++. ...
T Consensus 162 ~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-~~~ 240 (321)
T 3ow8_A 162 TRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-ANL 240 (321)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-CCE
T ss_pred CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-cce
Confidence 778899999999999999999999999999999999999999999999999999999999999999999999976 778
Q ss_pred eEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 354 VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 354 ~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+..+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++..+.+|.+.|.+++|+|+|++|++++.|+++..|
T Consensus 241 ~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vw 317 (321)
T 3ow8_A 241 AGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIY 317 (321)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred eEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999998765
No 2
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-41 Score=325.84 Aligned_cols=285 Identities=19% Similarity=0.281 Sum_probs=252.6
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
..+.+..|...|.+..+|+....++.+ ..|+.|++|+..+++.... +.+|.. .|
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~--------s~Dg~i~vwd~~~~~~~~~--l~~h~~----------------~V 153 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSA--------SEDATIKVWDYETGDFERT--LKGHTD----------------SV 153 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEE--------ESSSCEEEEETTTCCCCEE--ECCCSS----------------CE
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEE--------eCCCeEEEEECCCCcEEEE--EeccCC----------------cE
Confidence 356677888899999888876554433 4567889999988855433 344322 58
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.+++| ++++|++|+.||+|++|++.+.. +...+.+|...|.++.+ +|++. +|++|+.|++|++||+.++.++
T Consensus 154 ~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~---~~~~~~~h~~~V~~v~~--~p~~~-~l~s~s~D~~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 154 QDISFDHSGKLLASCSADMTIKLWDFQGFE---CIRTMHGHDHNVSSVSI--MPNGD-HIVSASRDKTIKMWEVQTGYCV 227 (410)
T ss_dssp EEEEECTTSSEEEEEETTSCCCEEETTSSC---EEECCCCCSSCEEEEEE--CSSSS-EEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEeCCCCc---eeEEEcCCCCCEEEEEE--eCCCC-EEEEEeCCCeEEEEECCCCcEE
Confidence 89988 78999999999999999997764 34667788999999988 99987 6999999999999999999998
Q ss_pred Eeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCC--------------------
Q 013282 271 KHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN-------------------- 329 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~-------------------- 329 (446)
..+. |...|.++.++|++++|++|+.|+.|++||+++++....+.+|...|.+++|+|+
T Consensus 228 ~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (410)
T 1vyh_C 228 KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKP 307 (410)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------
T ss_pred EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCC
Confidence 8887 8889999999999999999999999999999999999999999999999999996
Q ss_pred CCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEE
Q 013282 330 GVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGI 409 (446)
Q Consensus 330 ~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 409 (446)
|.+|++|+.|++|++||++. +.++..+.+|...|++++|+|+|++|++|+.|+.|++||+.+++.+..+.+|...|.++
T Consensus 308 g~~l~sgs~D~~i~iwd~~~-~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l 386 (410)
T 1vyh_C 308 GPFLLSGSRDKTIKMWDVST-GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSL 386 (410)
T ss_dssp CCEEEEEETTSEEEEEETTT-TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEE
T ss_pred CCEEEEEeCCCeEEEEECCC-CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEE
Confidence 67999999999999999976 78899999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCCCcEEEEEecCCcceE
Q 013282 410 SFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 410 ~~spdg~~l~~~~~D~~~~~~ 430 (446)
+|+|++.+|++|+.|++++.|
T Consensus 387 ~~~~~~~~l~sgs~D~~i~vW 407 (410)
T 1vyh_C 387 DFHKTAPYVVTGSVDQTVKVW 407 (410)
T ss_dssp EECSSSSCEEEEETTSEEEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEE
Confidence 999999999999999998766
No 3
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.1e-39 Score=307.85 Aligned_cols=287 Identities=20% Similarity=0.248 Sum_probs=243.5
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
...+++.|...+.+..++++.+.++ ....|+.|++|+..+++....+.. |. ..|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~--------s~s~Dg~v~iWd~~~~~~~~~~~~--~~----------------~~v 100 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLL--------SASQDGKLIIWDSYTTNKVHAIPL--RS----------------SWV 100 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEE--------EEETTTEEEEEETTTCCEEEEEEC--SS----------------SCE
T ss_pred hheeecCCCCceEEEEECCCCCEEE--------EEeCCCcEEEEECCCCCcceEeec--CC----------------ccE
Confidence 3456777777887777776654443 334577889999988755443332 21 158
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCe-eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGV-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~-~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
.++++ ++++|++|+.||.|++|++.+... ......+.+|.+.+.++.+ ++++ .+++++.|++|++||+.++++
T Consensus 101 ~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~--~l~s~s~d~~i~~wd~~~~~~ 176 (340)
T 1got_B 101 MTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF--LDDN--QIVTSSGDTTCALWDIETGQQ 176 (340)
T ss_dssp EEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE--EETT--EEEEEETTSCEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE--CCCC--cEEEEECCCcEEEEECCCCcE
Confidence 88888 899999999999999999977542 2234566788999998887 6666 488999999999999999999
Q ss_pred eEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 270 SKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
+..+. |...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++|+.|++|++||++
T Consensus 177 ~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~ 256 (340)
T 1got_B 177 TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLR 256 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECC
Confidence 98887 88999999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred CCCcceEEEec--CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 349 NLSESVAVLKG--NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 349 ~~~~~~~~~~~--~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
. ...+..+.. +...|++++|+|+|++|++|+.|+.|++||+.++..+..+.+|.+.|.+++|+|+|.+|++|+.|++
T Consensus 257 ~-~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 257 A-DQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp T-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSC
T ss_pred C-CcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 6 555555542 3347999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceE
Q 013282 427 YGSL 430 (446)
Q Consensus 427 ~~~~ 430 (446)
+..|
T Consensus 336 i~iW 339 (340)
T 1got_B 336 LKIW 339 (340)
T ss_dssp EEEE
T ss_pred EEec
Confidence 8765
No 4
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.3e-38 Score=304.22 Aligned_cols=288 Identities=19% Similarity=0.277 Sum_probs=242.4
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
...++..|...|.++.++++.+.++.+ ..|+.|++|+..+++....+..... .|
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~--------s~Dg~v~vWd~~~~~~~~~~~~~~~------------------~v 109 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSS--------SQDGKVIVWDSFTTNKEHAVTMPCT------------------WV 109 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEE--------ETTSEEEEEETTTCCEEEEEECSSS------------------CC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEE--------eCCCeEEEEECCCCCcceEEecCCC------------------CE
Confidence 345677888888888888765544433 4577889999988765544433211 36
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCe---eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGV---SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~---~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.++++ ++.+|++|+.|+.+++|++..... .........|...+.++.| +|++. .|++++.|++|++||+.++
T Consensus 110 ~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~-~l~t~s~D~~v~lwd~~~~ 186 (354)
T 2pbi_B 110 MACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSF--TNSDM-QILTASGDGTCALWDVESG 186 (354)
T ss_dssp CEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEE--CSSSS-EEEEEETTSEEEEEETTTC
T ss_pred EEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEE--eCCCC-EEEEEeCCCcEEEEeCCCC
Confidence 66666 999999999999999999864321 1112344578888998888 89887 6999999999999999999
Q ss_pred eeeEeee-CCCCeeEEEECC--CCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 268 QLSKHFR-FPWPVNHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 268 ~~~~~~~-~~~~v~~~~~sp--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
+++..+. |...|.+++|+| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 187 ~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~l 266 (354)
T 2pbi_B 187 QLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRL 266 (354)
T ss_dssp CEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred eEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEE
Confidence 9998888 889999999988 5789999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCcceEEEecC--CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 345 WDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~--~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
||++. ...+..+..+ ...+.+++|+|+|++|++|+.|+.|++||+.++..+..+.+|.+.|.+++|+|+|++|++|+
T Consensus 267 wd~~~-~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs 345 (354)
T 2pbi_B 267 YDLRA-DREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGS 345 (354)
T ss_dssp EETTT-TEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEE
T ss_pred EECCC-CcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEc
Confidence 99976 5556555543 34789999999999999999999999999999998988999999999999999999999999
Q ss_pred ecCCcceE
Q 013282 423 WDRTYGSL 430 (446)
Q Consensus 423 ~D~~~~~~ 430 (446)
.|+++..|
T Consensus 346 ~D~~v~vW 353 (354)
T 2pbi_B 346 WDHTLRVW 353 (354)
T ss_dssp TTSEEEEE
T ss_pred CCCCEEec
Confidence 99988765
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-38 Score=294.64 Aligned_cols=279 Identities=12% Similarity=0.089 Sum_probs=235.8
Q ss_pred eeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEE
Q 013282 114 YYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVS 193 (446)
Q Consensus 114 ~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~ 193 (446)
..+|+.+...|.+..+|++.+.++.+ ..++.|++|+..++... ..+.+|.. +|.
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~--------~~dg~v~lWd~~~~~~~--~~~~~~~~----------------~v~ 59 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTT--------LYSGRVELWNYETQVEV--RSIQVTET----------------PVR 59 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEE--------ETTSEEEEEETTTTEEE--EEEECCSS----------------CEE
T ss_pred EEeecCCCCceEEEEECCCCCEEEEE--------cCCCcEEEEECCCCcee--EEeeccCC----------------cEE
Confidence 34678888899999999876655544 34678899999877433 33333322 477
Q ss_pred EEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-eee
Q 013282 194 TLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLS 270 (446)
Q Consensus 194 ~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-~~~ 270 (446)
++++ ++++|++|+.||+|++|++.+... ...+.+|...|.++.+ +|++. +|++|+.|++|++||+.++ .+.
T Consensus 60 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~~-~l~sgs~D~~v~lWd~~~~~~~~ 133 (304)
T 2ynn_A 60 AGKFIARKNWIIVGSDDFRIRVFNYNTGEK---VVDFEAHPDYIRSIAV--HPTKP-YVLSGSDDLTVKLWNWENNWALE 133 (304)
T ss_dssp EEEEEGGGTEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEEGGGTTEEE
T ss_pred EEEEeCCCCEEEEECCCCEEEEEECCCCcE---EEEEeCCCCcEEEEEE--cCCCC-EEEEECCCCeEEEEECCCCcchh
Confidence 8877 899999999999999999988754 3556789999999988 99987 6999999999999999877 455
Q ss_pred Eeee-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEec-CCCCceeEEEECC--CCCEEEEEeCCCcEEEE
Q 013282 271 KHFR-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHP--NGVTFATGNQDKTCRIW 345 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~p--~~~~l~sgs~d~~v~iw 345 (446)
..+. |...|.+++|+| ++..|++|+.|+.|++||++++.....+. +|...+..++|+| ++.+|++|+.|++|++|
T Consensus 134 ~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iW 213 (304)
T 2ynn_A 134 QTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIW 213 (304)
T ss_dssp EEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEE
T ss_pred hhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEE
Confidence 5565 889999999999 67899999999999999998877666654 5668899999987 77899999999999999
Q ss_pred EccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCC--cEEEEEe
Q 013282 346 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE--SLFIGVW 423 (446)
Q Consensus 346 d~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~--~l~~~~~ 423 (446)
|++. ++++..+.+|...|.+++|+|++++|++|+.||.|++||+.+++....+..|...+.+++|+|++. +|++|+.
T Consensus 214 d~~~-~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~ 292 (304)
T 2ynn_A 214 DYQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFD 292 (304)
T ss_dssp ETTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEET
T ss_pred eCCC-CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecC
Confidence 9976 788999999999999999999999999999999999999999999999988999999999999886 4677766
Q ss_pred cC
Q 013282 424 DR 425 (446)
Q Consensus 424 D~ 425 (446)
|+
T Consensus 293 ~g 294 (304)
T 2ynn_A 293 NG 294 (304)
T ss_dssp TE
T ss_pred Cc
Confidence 54
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-38 Score=301.12 Aligned_cols=236 Identities=16% Similarity=0.238 Sum_probs=206.4
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeE-EEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFC-SRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~-~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ..+.|++|+.||+|+|||+.+++.... .....+|...|.+++| +|+|+ +|++|+.|++|++||+.+++
T Consensus 84 ~v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~--spdg~-~l~sgs~d~~i~iwd~~~~~ 160 (344)
T 4gqb_B 84 GVADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSV--LSSGT-QAVSGSKDICIKVWDLAQQV 160 (344)
T ss_dssp CEEEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEETTTTE
T ss_pred CEEEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEE--CCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 6999999 567899999999999999988764432 2345689999999988 99998 69999999999999999999
Q ss_pred eeEeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCceEEEec--CCCCceeEEEECC-CCCEEEEEeCCCcEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHP-NGVTFATGNQDKTCR 343 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p-~~~~l~sgs~d~~v~ 343 (446)
++..+. |...|.+++|+|++. +|++++.|+.|++||+++++++..+. .|...+.+++|+| ++++|++|+.||+|+
T Consensus 161 ~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~ 240 (344)
T 4gqb_B 161 VLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVS 240 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred EEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEE
Confidence 999988 899999999999875 78999999999999999999888875 3556789999999 567899999999999
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCC-CEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCc-EEEE
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES-LFIG 421 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~ 421 (446)
|||+++ ++++..+.+|...|++++|+|+| ++||+|+.|+.|+|||+.+++. ..+.+|.+.|.+++|+|+++. |++|
T Consensus 241 ~wd~~~-~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~ 318 (344)
T 4gqb_B 241 LVDTKS-TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTV 318 (344)
T ss_dssp EEESCC---CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEE
T ss_pred EEECCC-CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEE
Confidence 999976 78899999999999999999998 5899999999999999998865 457889999999999999876 5688
Q ss_pred EecCCcceEE
Q 013282 422 VWDRTYGSLL 431 (446)
Q Consensus 422 ~~D~~~~~~l 431 (446)
+.|+++..|.
T Consensus 319 s~D~~v~~w~ 328 (344)
T 4gqb_B 319 GWDHQVVHHV 328 (344)
T ss_dssp ETTSCEEEEE
T ss_pred cCCCeEEEEE
Confidence 9999998764
No 7
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.5e-39 Score=312.12 Aligned_cols=290 Identities=19% Similarity=0.237 Sum_probs=239.3
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
....++.|...|.+..+++..+.++. ...|+.|++|+..+++.... +.+|.. .|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s--------~s~D~~v~iWd~~~~~~~~~--~~~h~~----------------~v 111 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVS--------ASQDGRLIVWNALTSQKTHA--IKLHCP----------------WV 111 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEE--------EETTSEEEEEETTTTEEEEE--EECCCT----------------TC
T ss_pred EeecccccccEEEEEEEcCCCCEEEE--------EeCCCeEEEEECCCCccceE--EecCCC----------------CE
Confidence 34567788888888888876554443 34577889999988754433 333322 35
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCC----eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.+++| ++++|++|+.|+.|++|++.... .......+.+|.+.+.++.+ +|++...|++|+.|++|++||+.+
T Consensus 112 ~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~--~~~~~~~l~s~s~D~~i~~wd~~~ 189 (380)
T 3iz6_a 112 MECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQY--VPDQETRLITGSGDQTCVLWDVTT 189 (380)
T ss_dssp CCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBC--CSSSSSCEEEECTTSCEEEECTTT
T ss_pred EEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEE--ecCCCCEEEEECCCCcEEEEEcCC
Confidence 56666 89999999999999999986532 11123456688888888877 787666799999999999999999
Q ss_pred ceeeEee-----e-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECC-CCceEEEecCCCCceeEEEECCCCCEEEEEeC
Q 013282 267 YQLSKHF-----R-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGNQ 338 (446)
Q Consensus 267 ~~~~~~~-----~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~ 338 (446)
++.+..+ . |...|.+++|+| ++++|++|+.|+.|++||++ .++.+..+.+|.+.|.+++|+|++++|++|+.
T Consensus 190 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 269 (380)
T 3iz6_a 190 GQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSD 269 (380)
T ss_dssp CCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECS
T ss_pred CcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcC
Confidence 9988776 2 678899999987 88999999999999999998 56788899999999999999999999999999
Q ss_pred CCcEEEEEccCCCcceEEEecCC-------CceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEe----eccccCeE
Q 013282 339 DKTCRIWDLRNLSESVAVLKGNL-------GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE----IDFFGEIS 407 (446)
Q Consensus 339 d~~v~iwd~~~~~~~~~~~~~~~-------~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~----~~~~~~v~ 407 (446)
|++|++||++. +.++..+..+. ..|++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|+
T Consensus 270 D~~i~lwd~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 348 (380)
T 3iz6_a 270 DGTCRLFDMRT-GHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRIS 348 (380)
T ss_dssp SSCEEEEETTT-TEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCC
T ss_pred CCeEEEEECCC-CcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceE
Confidence 99999999976 67777765543 24899999999999999999999999999998877666 56899999
Q ss_pred EEEEcCCCCcEEEEEecCCcceEE
Q 013282 408 GISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 408 ~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
+++|+|+|++|++|+.|+++..|-
T Consensus 349 ~l~~s~dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 349 CLGLSSDGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp EEEECSSSSEEEEECTTSCEEEEE
T ss_pred EEEECCCCCEEEEeeCCCCEEEEe
Confidence 999999999999999999998774
No 8
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=4.5e-37 Score=297.74 Aligned_cols=295 Identities=18% Similarity=0.193 Sum_probs=236.8
Q ss_pred eccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCcc---ccCccceEEEE
Q 013282 119 RNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLL---EGFTQTQVSTL 195 (446)
Q Consensus 119 ~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~---~~~~~~~v~~l 195 (446)
.+...|.++.++++.+.++ ...++.+.+|+..+++....+ .++.... ..+..+. .......|.++
T Consensus 62 ~h~~~V~~v~fspdg~~la---------~g~~~~v~i~~~~~g~~~~~l--~~~~~~~-~~~~~~~~~~~~~~~~~v~~v 129 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLA---------TGCNKTTQVYRVSDGSLVARL--SDDSAAN-KDPENLNTSSSPSSDLYIRSV 129 (393)
T ss_dssp ECSSCCCEEEECTTSSEEE---------EECBSCEEEEETTTCCEEEEE--CC------------------CCCCBEEEE
T ss_pred CCCCEEEEEEECCCCCEEE---------EEcCCcEEEEEecCCCEEEEe--cCccccc-cccccccccccCCCceeEEEE
Confidence 3555666666666554443 334567899998887543333 3221110 0000000 01112258888
Q ss_pred Ee--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEee
Q 013282 196 AV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHF 273 (446)
Q Consensus 196 ~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 273 (446)
+| ++++|++|+.||.|++|++.+.. ....+.+|...|.++.| +|++. .|++++.|++|++||+.++++...+
T Consensus 130 ~~s~dg~~l~s~~~d~~i~iwd~~~~~---~~~~~~~h~~~v~~~~~--~p~~~-~l~s~s~d~~v~iwd~~~~~~~~~~ 203 (393)
T 1erj_A 130 CFSPDGKFLATGAEDRLIRIWDIENRK---IVMILQGHEQDIYSLDY--FPSGD-KLVSGSGDRTVRIWDLRTGQCSLTL 203 (393)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTE---EEEEECCCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCc---EEEEEccCCCCEEEEEE--cCCCC-EEEEecCCCcEEEEECCCCeeEEEE
Confidence 88 89999999999999999998763 34566789999999888 99988 6999999999999999999999888
Q ss_pred eCCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEe-------cCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 274 RFPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASL-------CGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 274 ~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
.+...+.+++|+| ++++|++|+.|+.|++||+++++.+..+ .+|...|.+++|+|+|++|++|+.|++|++|
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~w 283 (393)
T 1erj_A 204 SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLW 283 (393)
T ss_dssp ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEE
Confidence 8888999999999 8999999999999999999999888777 5799999999999999999999999999999
Q ss_pred EccCC-----------CcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcC-
Q 013282 346 DLRNL-----------SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSP- 413 (446)
Q Consensus 346 d~~~~-----------~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp- 413 (446)
|++.. ..+...+.+|...|.+++|+|++++|++|+.|+.|++||+.++..+..+.+|.+.|.+++|+|
T Consensus 284 d~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~ 363 (393)
T 1erj_A 284 NLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANG 363 (393)
T ss_dssp EC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS
T ss_pred ECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCC
Confidence 99652 234567789999999999999999999999999999999999999999999999999999986
Q ss_pred -----CCCcEEEEEecCCcceEE
Q 013282 414 -----DTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 414 -----dg~~l~~~~~D~~~~~~l 431 (446)
++++|++|+.|++++.|-
T Consensus 364 ~~~~p~~~~l~sgs~Dg~i~iW~ 386 (393)
T 1erj_A 364 SSLGPEYNVFATGSGDCKARIWK 386 (393)
T ss_dssp CTTCTTCEEEEEEETTSEEEEEE
T ss_pred cCcCCCCCEEEEECCCCcEEECc
Confidence 688999999999998774
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-37 Score=290.37 Aligned_cols=234 Identities=17% Similarity=0.231 Sum_probs=209.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ++++|++|+.||+|++|++.+.. +...+..|...|.++.| +|+++ +|++|+.|++|++||+.+++
T Consensus 15 ~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~---~~~~~~~~~~~v~~~~~--~~~~~-~l~s~s~d~~i~vwd~~~~~ 88 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTLYSGRVELWNYETQV---EVRSIQVTETPVRAGKF--IARKN-WIIVGSDDFRIRVFNYNTGE 88 (304)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEE--EGGGT-EEEEEETTSEEEEEETTTCC
T ss_pred ceEEEEECCCCCEEEEEcCCCcEEEEECCCCc---eeEEeeccCCcEEEEEE--eCCCC-EEEEECCCCEEEEEECCCCc
Confidence 5889988 89999999999999999998763 34566778888999888 88887 69999999999999999999
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC-ceEEEecCCCCceeEEEECC-CCCEEEEEeCCCcEEEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v~iw 345 (446)
.+..+. |...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++|+| ++.+|++|+.|++|++|
T Consensus 89 ~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iw 168 (304)
T 2ynn_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (304)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEE
T ss_pred EEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEE
Confidence 988888 8999999999999999999999999999999977 45667889999999999999 68999999999999999
Q ss_pred EccCCCcceEEEecCCCceEEEEEcc--CCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 346 DLRNLSESVAVLKGNLGAIRSIRYTS--DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 346 d~~~~~~~~~~~~~~~~~v~~l~~s~--dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
|++..........+|...+..+.|+| ++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++++|++|+.
T Consensus 169 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~ 248 (304)
T 2ynn_A 169 SLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSE 248 (304)
T ss_dssp ETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEET
T ss_pred ECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcC
Confidence 99764333444446668899999987 7789999999999999999999999999999999999999999999999999
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|++++.|
T Consensus 249 Dg~i~iW 255 (304)
T 2ynn_A 249 DGTLKIW 255 (304)
T ss_dssp TSCEEEE
T ss_pred CCeEEEE
Confidence 9998765
No 10
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.8e-37 Score=292.08 Aligned_cols=235 Identities=19% Similarity=0.226 Sum_probs=215.3
Q ss_pred eEEEEEe------CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec
Q 013282 191 QVSTLAV------KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (446)
Q Consensus 191 ~v~~l~~------~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~ 264 (446)
.|.+++| ++.+|++|+.||+|+||++..... .....+.+|...|.++.+ ++++. ++++++.|++|++||+
T Consensus 34 ~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-~~~~~l~gh~~~v~~~~~--~~~~~-~l~s~s~D~~i~lWd~ 109 (321)
T 3ow8_A 34 AIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-DLQWSLEGHQLGVVSVDI--SHTLP-IAASSSLDAHIRLWDL 109 (321)
T ss_dssp CEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CSSSS-EEEEEETTSEEEEEET
T ss_pred cEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-eeeeeeccCCCCEEEEEE--CCCCC-EEEEEeCCCcEEEEEC
Confidence 6999998 356999999999999999976543 223456789999999988 89887 7999999999999999
Q ss_pred CcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEE
Q 013282 265 GKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 265 ~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
.+++.+..+. +...+.+++|+|++++|++++.++.|++|++++++....+..|...|.+++|+|+|++|++|+.|++|+
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~ 189 (321)
T 3ow8_A 110 ENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIIN 189 (321)
T ss_dssp TTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEE
Confidence 9999988887 778899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
+||+++ ++.+..+.+|..+|++++|+|++++|++|+.|+.|++||++++.....+.+|...|.+++|+|++++|++++.
T Consensus 190 iwd~~~-~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~ 268 (321)
T 3ow8_A 190 IFDIAT-GKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSS 268 (321)
T ss_dssp EEETTT-TEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCC-CcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeC
Confidence 999976 7888999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|+++..|
T Consensus 269 D~~v~iw 275 (321)
T 3ow8_A 269 DKSVKVW 275 (321)
T ss_dssp TSCEEEE
T ss_pred CCcEEEE
Confidence 9988655
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.2e-37 Score=301.65 Aligned_cols=233 Identities=15% Similarity=0.259 Sum_probs=217.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
+|.+++| ++.+|++|+.||+|++|++.++... ..+.+|...|.++.| +|++. +|++|+.|++|++||+.+++
T Consensus 110 ~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~---~~l~~h~~~V~~v~~--~~~~~-~l~sgs~D~~i~iwd~~~~~ 183 (410)
T 1vyh_C 110 PVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE---RTLKGHTDSVQDISF--DHSGK-LLASCSADMTIKLWDFQGFE 183 (410)
T ss_dssp CEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC---EEECCCSSCEEEEEE--CTTSS-EEEEEETTSCCCEEETTSSC
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE---EEEeccCCcEEEEEE--cCCCC-EEEEEeCCCeEEEEeCCCCc
Confidence 6999998 7899999999999999999887544 556789999999988 89987 79999999999999999999
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
++..+. |...|.+++|+|++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++.+|++|+.|++|++||+
T Consensus 184 ~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~ 263 (410)
T 1vyh_C 184 CIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVV 263 (410)
T ss_dssp EEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred eeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEEC
Confidence 988887 8899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceEEEecCCCceEEEEEccC--------------------CCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeE
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSD--------------------GRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS 407 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~d--------------------g~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 407 (446)
+. ..+...+.+|...|.+++|+|+ |.+|++|+.|+.|++||++++.++..+.+|...|.
T Consensus 264 ~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~ 342 (410)
T 1vyh_C 264 AT-KECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVR 342 (410)
T ss_dssp TT-CCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred CC-CceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEE
Confidence 76 7788899999999999999996 67999999999999999999999999999999999
Q ss_pred EEEEcCCCCcEEEEEecCCcceE
Q 013282 408 GISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 408 ~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+++|+|+|++|++|+.|+++..|
T Consensus 343 ~v~~~~~g~~l~s~s~D~~i~vw 365 (410)
T 1vyh_C 343 GVLFHSGGKFILSCADDKTLRVW 365 (410)
T ss_dssp EEEECSSSSCEEEEETTTEEEEE
T ss_pred EEEEcCCCCEEEEEeCCCeEEEE
Confidence 99999999999999999988765
No 12
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=6.4e-38 Score=299.65 Aligned_cols=290 Identities=16% Similarity=0.215 Sum_probs=228.8
Q ss_pred ccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEE--ecCCCCCCCCCCCCCccccCccceEEEEEe
Q 013282 120 NSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVL--NVSGHVAPSEKHPGSLLEGFTQTQVSTLAV 197 (446)
Q Consensus 120 ~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~--~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~ 197 (446)
+.+.|.+..++++.+.|+.+..... ..-++.+.+|+..++.....+ ...+ +...|.+++|
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~--~~wd~~v~~~~~~~~~~~~~~~~~~~~----------------~~~~V~~~~~ 102 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSS--RTWGGSIWVFKDPEGAPNESLCTAGVQ----------------TEAGVTDVAW 102 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSS--SSCCEEEEEESSCC---CGGGCSEEEE----------------CSSCEEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCC--ccccCeEEEEECCCCCcceeEecccCC----------------CCCCEEEEEE
Confidence 4557888888888887776653321 123678889987666422111 0111 1125999999
Q ss_pred -CCcEEEEeccCCcEEEEEcCCCCeeeE-EEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-
Q 013282 198 -KDKLLVAGGFQGELICKHLDRPGVSFC-SRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR- 274 (446)
Q Consensus 198 -~~~~l~tg~~dg~i~vw~~~~~~~~~~-~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~- 274 (446)
....+++++.||+|+||++.+...... .....+|...|.++.| +|++. +|++|+.|+.|++||+.+++++..+.
T Consensus 103 s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~--spdg~-~l~sgs~dg~v~iwd~~~~~~~~~~~~ 179 (357)
T 4g56_B 103 VSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSV--FSDGT-QAVSGGKDFSVKVWDLSQKAVLKSYNA 179 (357)
T ss_dssp ETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred cCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEE--CCCCC-EEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 445677888999999999987653221 1234478889999988 99998 69999999999999999999999888
Q ss_pred CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCceEEEec--CCCCceeEEEECCC-CCEEEEEeCCCcEEEEEccCC
Q 013282 275 FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPN-GVTFATGNQDKTCRIWDLRNL 350 (446)
Q Consensus 275 ~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p~-~~~l~sgs~d~~v~iwd~~~~ 350 (446)
|...|++++|+|++. ++++++.|+.|++||+++++++..+. .|...+.+++|+|+ +.+|++|+.|+.|++||+++
T Consensus 180 h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~- 258 (357)
T 4g56_B 180 HSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN- 258 (357)
T ss_dssp CSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-
T ss_pred CCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-
Confidence 899999999999875 78999999999999999988776654 46778999999996 57899999999999999976
Q ss_pred CcceEEEecCCCceEEEEEccCC-CEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcC-CCCcEEEEEecCCcc
Q 013282 351 SESVAVLKGNLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSP-DTESLFIGVWDRTYG 428 (446)
Q Consensus 351 ~~~~~~~~~~~~~v~~l~~s~dg-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~D~~~~ 428 (446)
.+++..+.+|...|++++|+|++ ++||+|+.|+.|+|||+++++.+. ..+|.+.|++++|+| ++.+|++|+.|+++.
T Consensus 259 ~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~ 337 (357)
T 4g56_B 259 PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVL 337 (357)
T ss_dssp GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEE
T ss_pred CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEE
Confidence 78899999999999999999987 689999999999999999987664 457999999999999 799999999999998
Q ss_pred eEEE
Q 013282 429 SLLE 432 (446)
Q Consensus 429 ~~l~ 432 (446)
.|-.
T Consensus 338 iW~~ 341 (357)
T 4g56_B 338 HHHL 341 (357)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7753
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.9e-36 Score=283.61 Aligned_cols=284 Identities=14% Similarity=0.177 Sum_probs=230.3
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc---eEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR---SQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~---~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
++..|...|.+..+++....+ .+....|+.|++|+...... ..+..+.||.. .|
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~-------l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~----------------~v 68 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNL-------LLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSH----------------IV 68 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTE-------EEEEETTSEEEEEEEEEETTEEEEEEEEEECCSS----------------CE
T ss_pred EEccccceEEEEEccCCCccE-------EEEecCCccEEEecCCCCCccccccceEEeCCcc----------------cE
Confidence 456677777766666543222 23344578889999754332 23344555533 58
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.++++ ++++|++|+.||+|++|++.++. +...+.+|...|.++.+ +|++. +|++|+.|++|++||+......
T Consensus 69 ~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~---~~~~~~~h~~~v~~~~~--~~~~~-~l~s~s~D~~i~vwd~~~~~~~ 142 (319)
T 3frx_A 69 QDCTLTADGAYALSASWDKTLRLWDVATGE---TYQRFVGHKSDVMSVDI--DKKAS-MIISGSRDKTIKVWTIKGQCLA 142 (319)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEE--CTTSC-EEEEEETTSCEEEEETTSCEEE
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCC---eeEEEccCCCcEEEEEE--cCCCC-EEEEEeCCCeEEEEECCCCeEE
Confidence 88888 89999999999999999998774 34566789999999988 89987 6999999999999999765444
Q ss_pred EeeeCCCCeeEEEECCC------CCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 271 KHFRFPWPVNHSSQSPD------GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 271 ~~~~~~~~v~~~~~sp~------~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
....|...|.++.|+|. +..+++++.|+.|++||+++++....+.+|...|.+++|+|+|++|++|+.|++|++
T Consensus 143 ~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~i 222 (319)
T 3frx_A 143 TLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIML 222 (319)
T ss_dssp EECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred EEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEE
Confidence 44448899999999984 448999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec--------cccCeEEEEEcCCCC
Q 013282 345 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID--------FFGEISGISFSPDTE 416 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~--------~~~~v~~~~~spdg~ 416 (446)
||++. .+++..+..+ ..|.+++|+|++.+|++++.++ +++|++..+..+..+.. |...+.+++|+|+|+
T Consensus 223 wd~~~-~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 223 WNLAA-KKAMYTLSAQ-DEVFSLAFSPNRYWLAAATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ 299 (319)
T ss_dssp EETTT-TEEEEEEECC-SCEEEEEECSSSSEEEEEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS
T ss_pred EECCC-CcEEEEecCC-CcEEEEEEcCCCCEEEEEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC
Confidence 99976 7778888764 6799999999999999887655 99999988766655432 356789999999999
Q ss_pred cEEEEEecCCcceEE
Q 013282 417 SLFIGVWDRTYGSLL 431 (446)
Q Consensus 417 ~l~~~~~D~~~~~~l 431 (446)
+|++|+.|+++..|-
T Consensus 300 ~l~sg~~Dg~i~vWd 314 (319)
T 3frx_A 300 TLFAGYTDNVIRVWQ 314 (319)
T ss_dssp EEEEEETTSCEEEEE
T ss_pred EEEEeecCceEEEEE
Confidence 999999999988764
No 14
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-36 Score=286.50 Aligned_cols=293 Identities=16% Similarity=0.153 Sum_probs=227.3
Q ss_pred eeeeccc-cccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEE-ecCCCCCCCCCCCCCccccCccceEE
Q 013282 116 EFRRNSR-SVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVL-NVSGHVAPSEKHPGSLLEGFTQTQVS 193 (446)
Q Consensus 116 ~f~~~~~-~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~-~~~g~~~~~~~~~g~~~~~~~~~~v~ 193 (446)
++..+.. .+.+..++++.+.+ +....|+.|++|+..++...... ...||.. .|.
T Consensus 10 ~~~~h~~~~v~~l~~sp~g~~l--------as~~~D~~i~iw~~~~~~~~~~~~~~~~h~~----------------~v~ 65 (345)
T 3fm0_A 10 RVPAHPDSRCWFLAWNPAGTLL--------ASCGGDRRIRIWGTEGDSWICKSVLSEGHQR----------------TVR 65 (345)
T ss_dssp EECCSTTSCEEEEEECTTSSCE--------EEEETTSCEEEEEEETTEEEEEEEECSSCSS----------------CEE
T ss_pred eecCCCCCcEEEEEECCCCCEE--------EEEcCCCeEEEEEcCCCcceeeeeeccccCC----------------cEE
Confidence 3444443 45555555543333 33455788899998766432222 2233322 589
Q ss_pred EEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce---
Q 013282 194 TLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ--- 268 (446)
Q Consensus 194 ~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~--- 268 (446)
+++| ++++|++|+.||+|++|++..... .+...+.+|...|.++.| +|++. +|++|+.|++|++||+.++.
T Consensus 66 ~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~-~~~~~~~~h~~~v~~v~~--sp~~~-~l~s~s~D~~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 66 KVAWSPCGNYLASASFDATTCIWKKNQDDF-ECVTTLEGHENEVKSVAW--APSGN-LLATCSRDKSVWVWEVDEEDEYE 141 (345)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEEECCC-E-EEEEEECCCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEEECTTSCEE
T ss_pred EEEECCCCCEEEEEECCCcEEEEEccCCCe-EEEEEccCCCCCceEEEE--eCCCC-EEEEEECCCeEEEEECCCCCCeE
Confidence 9998 899999999999999999876543 235667789999999988 99987 79999999999999997653
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCc--eEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
++..+. |...|.+++|+|++++|++++.|+.|++||+++++ +...+.+|...|.+++|+|+|++|++|+.|++|+||
T Consensus 142 ~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW 221 (345)
T 3fm0_A 142 CVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIW 221 (345)
T ss_dssp EEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEe
Confidence 344554 88899999999999999999999999999998875 456788999999999999999999999999999999
Q ss_pred EccCCC--------------cceEEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCee---------EeEeec
Q 013282 346 DLRNLS--------------ESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE---------KEQEID 401 (446)
Q Consensus 346 d~~~~~--------------~~~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~---------~~~~~~ 401 (446)
|..... .++..+.+ |...|.+++|+|++..|++++.|+.|++|+...+.. .....+
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~ 301 (345)
T 3fm0_A 222 RQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQA 301 (345)
T ss_dssp EEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTS
T ss_pred ccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeeccc
Confidence 974322 12344444 888999999999999999999999999999876421 112246
Q ss_pred cccCeEEEEEcCCCC-cEEEEEecCCcceEEEEecc
Q 013282 402 FFGEISGISFSPDTE-SLFIGVWDRTYGSLLEYGRC 436 (446)
Q Consensus 402 ~~~~v~~~~~spdg~-~l~~~~~D~~~~~~l~~~~~ 436 (446)
|...|++++|+|++. +|++|+.|+++..|-...+.
T Consensus 302 h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 302 HSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp SSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred ccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 889999999999985 89999999999887554433
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.4e-36 Score=282.69 Aligned_cols=287 Identities=15% Similarity=0.126 Sum_probs=219.0
Q ss_pred eeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEec-CC-CCCCCCCCCCCccccCccce
Q 013282 114 YYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNV-SG-HVAPSEKHPGSLLEGFTQTQ 191 (446)
Q Consensus 114 ~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~-~g-~~~~~~~~~g~~~~~~~~~~ 191 (446)
...+..+...|.+..+++. . .+....|+.|++|+..++.......+ .+ |. ..
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~--------las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~----------------~~ 60 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--I--------LATGSTDRKIKLVSVKYDDFTLIDVLDETAHK----------------KA 60 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--E--------EEEEESSSCEEEEECSSSCCEEEEEECTTCCC----------------SC
T ss_pred ceeeccCCCceeeeccCCC--E--------EEEEcCCCEEEEEEecCCCeEEEEEEecCCcc----------------CC
Confidence 4456677777777666554 1 22334578899999876543322222 11 22 25
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCC----eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
|.+++| ++++|++|+.||+|++|++.... ...+...+.+|...|.++.| +|++. +|++|+.|++|++||+.
T Consensus 61 v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~--sp~g~-~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAW--SNDGY-YLATCSRDKSVWIWETD 137 (330)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEE--CTTSC-EEEEEETTSCEEEEECC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEE--CCCCC-EEEEEeCCCEEEEEecc
Confidence 999998 88999999999999999985432 12334566789999999988 99987 79999999999999994
Q ss_pred c----ceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC--ceEEEecCCCCceeEEEECCC--CCEEEEE
Q 013282 266 K----YQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG--KTIASLCGHLDFSFASAWHPN--GVTFATG 336 (446)
Q Consensus 266 ~----~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~p~--~~~l~sg 336 (446)
. .+++..+. |...|.+++|+|++++|++++.|++|++||..++ +++..+.+|.+.|.+++|+|+ +.+|++|
T Consensus 138 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~ 217 (330)
T 2hes_X 138 ESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSG 217 (330)
T ss_dssp TTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEE
T ss_pred CCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEE
Confidence 3 24556665 8899999999999999999999999999998876 678889999999999999998 7799999
Q ss_pred eCCCcEEEEEccCCC-------cceEEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCe--eEeE-eecccc-
Q 013282 337 NQDKTCRIWDLRNLS-------ESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY--EKEQ-EIDFFG- 404 (446)
Q Consensus 337 s~d~~v~iwd~~~~~-------~~~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~--~~~~-~~~~~~- 404 (446)
+.|++|++||++... .+...+.. |...|.+++|++++ +|++++.||.|+||+..++. .... ...|..
T Consensus 218 s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~ 296 (330)
T 2hes_X 218 SDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVY 296 (330)
T ss_dssp ETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTS
T ss_pred eCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccc
Confidence 999999999996421 23444554 88999999999766 78999999999999998874 2322 245776
Q ss_pred CeEEEEEcC--CCCcEEEEEecCCcceE
Q 013282 405 EISGISFSP--DTESLFIGVWDRTYGSL 430 (446)
Q Consensus 405 ~v~~~~~sp--dg~~l~~~~~D~~~~~~ 430 (446)
.|.+++|+| ++++|++|+.|+++..|
T Consensus 297 ~v~~v~~~~~~~~~~las~s~Dg~v~~W 324 (330)
T 2hes_X 297 EINVVKWLELNGKTILATGGDDGIVNFW 324 (330)
T ss_dssp CEEEEEEC-----CCEEEEETTSEEEEE
T ss_pred eEEEEEEecCCCceEEEEecCCCcEEEE
Confidence 899999999 78999999999998766
No 16
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.3e-35 Score=278.09 Aligned_cols=285 Identities=14% Similarity=0.188 Sum_probs=238.8
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
..+.+..|...+.+..++++.+.++.+ ..++.|++|+..+++.... +.+|.. .|
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~--------~~dg~i~iw~~~~~~~~~~--~~~h~~----------------~v 68 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASS--------SADKLIKIWGAYDGKFEKT--ISGHKL----------------GI 68 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEE--------ETTSCEEEEETTTCCEEEE--ECCCSS----------------CE
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEe--------eCCCeEEEEeCCCcccchh--hccCCC----------------ce
Confidence 345677777788888887765544433 4467789999887754333 333322 58
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.+++| ++++|++|+.||.|++|++.+... ...+..|...|.++.+ +|++. +|++++.|+.|++||+.+++.+
T Consensus 69 ~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~---~~~~~~~~~~v~~~~~--~~~~~-~l~s~~~d~~i~iwd~~~~~~~ 142 (312)
T 4ery_A 69 SDVAWSSDSNLLVSASDDKTLKIWDVSSGKC---LKTLKGHSNYVFCCNF--NPQSN-LIVSGSFDESVRIWDVKTGKCL 142 (312)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEE--CSSSS-EEEEEETTSCEEEEETTTCCEE
T ss_pred EEEEEcCCCCEEEEECCCCEEEEEECCCCcE---EEEEcCCCCCEEEEEE--cCCCC-EEEEEeCCCcEEEEECCCCEEE
Confidence 88888 889999999999999999987753 3556688888988887 89987 6999999999999999999988
Q ss_pred Eeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec-CCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 271 KHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
..+. |..+|.+++|+|++++|++++.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.|+.|++||++
T Consensus 143 ~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~ 222 (312)
T 4ery_A 143 KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS 222 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC
Confidence 8887 88899999999999999999999999999999999887765 466789999999999999999999999999997
Q ss_pred CCCcceEEEecCCCceEE---EEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEE--e
Q 013282 349 NLSESVAVLKGNLGAIRS---IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV--W 423 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~---l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~ 423 (446)
. ++++..+.+|...+.+ ....+++++|++|+.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++ .
T Consensus 223 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~ 301 (312)
T 4ery_A 223 K-GKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTENIIASAALEN 301 (312)
T ss_dssp T-TEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSSEEEEEECTT
T ss_pred C-CcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCCceEEEEccC
Confidence 6 7788888888764332 23346789999999999999999999999999999999999999999999999998 4
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|++++.|
T Consensus 302 d~~i~~W 308 (312)
T 4ery_A 302 DKTIKLW 308 (312)
T ss_dssp TCCEEEE
T ss_pred CccEEEe
Confidence 7877765
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.2e-35 Score=279.36 Aligned_cols=291 Identities=15% Similarity=0.138 Sum_probs=225.8
Q ss_pred eeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc-----eEEEecCCCCCCCCCCCCCccccCc
Q 013282 114 YYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR-----SQVLNVSGHVAPSEKHPGSLLEGFT 188 (446)
Q Consensus 114 ~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~-----~~~~~~~g~~~~~~~~~g~~~~~~~ 188 (446)
...++.|...|.+..+++....- ..+...+....|+.|++|+..+... .....+.||..
T Consensus 14 ~~~l~gH~~~V~~~~~~~s~~~~--~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~-------------- 77 (343)
T 2xzm_R 14 RGILEGHSDWVTSIVAGFSQKEN--EDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNH-------------- 77 (343)
T ss_dssp EEEEECCSSCEEEEEECCCSSTT--CCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSS--------------
T ss_pred eeeeccchhhhhheeeEEEeecC--CCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCC--------------
Confidence 44567777777777663221100 0122234445678899999865431 22334455432
Q ss_pred cceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 189 ~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|.++++ ++.+|++|+.||+|++|++.+... ...+.+|...|.++.| +|++. +|++++.|++|++||+..
T Consensus 78 --~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~---~~~~~~h~~~v~~v~~--sp~~~-~l~s~~~d~~i~~wd~~~ 149 (343)
T 2xzm_R 78 --FVSDLALSQENCFAISSSWDKTLRLWDLRTGTT---YKRFVGHQSEVYSVAF--SPDNR-QILSAGAEREIKLWNILG 149 (343)
T ss_dssp --CEEEEEECSSTTEEEEEETTSEEEEEETTSSCE---EEEEECCCSCEEEEEE--CSSTT-EEEEEETTSCEEEEESSS
T ss_pred --ceEEEEECCCCCEEEEEcCCCcEEEEECCCCcE---EEEEcCCCCcEEEEEE--CCCCC-EEEEEcCCCEEEEEeccC
Confidence 5888888 889999999999999999987753 3556789999999988 99998 699999999999999975
Q ss_pred ceeeEee---eCCCCeeEEEECCCC----------CEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEE
Q 013282 267 YQLSKHF---RFPWPVNHSSQSPDG----------KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 267 ~~~~~~~---~~~~~v~~~~~sp~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 333 (446)
....... .|...|.+++|+|++ .+|++++.|+.|++|| ..++....+.+|...|.+++|+|+|++|
T Consensus 150 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 150 ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYI 228 (343)
T ss_dssp CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEE
Confidence 4443333 377889999999987 7899999999999999 5567778889999999999999999999
Q ss_pred EEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEe--Eee-----------
Q 013282 334 ATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE--QEI----------- 400 (446)
Q Consensus 334 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~--~~~----------- 400 (446)
++|+.|++|++||++....+...+. +...|.+++|+|++++|+++ .|+.|++||+.++.... .+.
T Consensus 229 ~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (343)
T 2xzm_R 229 ATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQK 306 (343)
T ss_dssp EEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBC
T ss_pred EEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhc
Confidence 9999999999999965455555553 45679999999999988765 47779999998765433 222
Q ss_pred ccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 401 DFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 401 ~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
+|...|.+++|+|+|++|++|+.|+++..|-
T Consensus 307 ~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~ 337 (343)
T 2xzm_R 307 GKNPQCTSLAWNALGKKLFAGFTDGVIRTFS 337 (343)
T ss_dssp CSCCCEEEEEECSSSCCEEEEETTSEEEEEE
T ss_pred CCCCceEEEEECCCCCeEEEecCCceEEEEE
Confidence 5777899999999999999999999987763
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.9e-35 Score=302.74 Aligned_cols=261 Identities=15% Similarity=0.167 Sum_probs=215.9
Q ss_pred EEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCee
Q 013282 145 VYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS 222 (446)
Q Consensus 145 v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~ 222 (446)
+.+..+..+.+|+..++..... +.||.. .|++++| +|++||+|+.||+|+|||+.+....
T Consensus 33 l~~~~~~~v~l~~~~~~~~~~~--~~~h~~----------------~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~ 94 (611)
T 1nr0_A 33 IQYCNGTSVYTVPVGSLTDTEI--YTEHSH----------------QTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI 94 (611)
T ss_dssp EEEEETTEEEEEETTCSSCCEE--ECCCSS----------------CEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC
T ss_pred EEeCCCCEEEEecCCCcccCeE--ecCCCC----------------ceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce
Confidence 3333456789999876643333 344432 5888888 8999999999999999999654432
Q ss_pred eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC----CcEEEEecCcceeeEeee-CCCCeeEEEECCCCC-EEEEEec
Q 013282 223 FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGK-LLIIVGD 296 (446)
Q Consensus 223 ~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d----g~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~ 296 (446)
....+..|.+.|.+++| +|+++. |++++.+ +.|++||. ++....+. |...|++++|+|++. .|++|+.
T Consensus 95 -~~~~~~~~~~~v~~v~f--s~dg~~-l~~~~~~~~~~~~v~~wd~--~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~ 168 (611)
T 1nr0_A 95 -LKTTIPVFSGPVKDISW--DSESKR-IAAVGEGRERFGHVFLFDT--GTSNGNLTGQARAMNSVDFKPSRPFRIISGSD 168 (611)
T ss_dssp -EEEEEECSSSCEEEEEE--CTTSCE-EEEEECCSSCSEEEEETTT--CCBCBCCCCCSSCEEEEEECSSSSCEEEEEET
T ss_pred -eeEeecccCCceEEEEE--CCCCCE-EEEEECCCCceeEEEEeeC--CCCcceecCCCCCceEEEECCCCCeEEEEEeC
Confidence 23456678889999988 999984 6666554 47888884 55555565 889999999999987 6999999
Q ss_pred CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEe-------cCCCceEEEEE
Q 013282 297 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK-------GNLGAIRSIRY 369 (446)
Q Consensus 297 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~-------~~~~~v~~l~~ 369 (446)
|++|++||..+++.+..+.+|...|.+++|+|+|++||+|+.|++|++||+.. ++.+..+. +|.+.|.+++|
T Consensus 169 D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~-g~~~~~~~~~~~~~~~h~~~V~~v~~ 247 (611)
T 1nr0_A 169 DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD-GTKTGVFEDDSLKNVAHSGSVFGLTW 247 (611)
T ss_dssp TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-CCEEEECBCTTSSSCSSSSCEEEEEE
T ss_pred CCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCC-CcEeeeeccccccccccCCCEEEEEE
Confidence 99999999999999999999999999999999999999999999999999966 66777774 79999999999
Q ss_pred ccCCCEEEEEeCCCeEEEEEcCCCeeEeE-------------------------------------------eeccccCe
Q 013282 370 TSDGRYMATAEPADFVHVYDVKSGYEKEQ-------------------------------------------EIDFFGEI 406 (446)
Q Consensus 370 s~dg~~l~~~~~dg~i~iwd~~~~~~~~~-------------------------------------------~~~~~~~v 406 (446)
+|+|++|++++.|++|++||+.+++.+.. +.+|...|
T Consensus 248 spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v 327 (611)
T 1nr0_A 248 SPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAI 327 (611)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCE
T ss_pred CCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCE
Confidence 99999999999999999999998765432 34688899
Q ss_pred EEEEEcCCCCcEEEEEecCCcceE
Q 013282 407 SGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 407 ~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.+++|+|+|++|++++.|+++..|
T Consensus 328 ~~l~~spdg~~l~s~s~D~~v~~W 351 (611)
T 1nr0_A 328 TALSSSADGKTLFSADAEGHINSW 351 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEEeCCCCEEEEEeCCCcEEEE
Confidence 999999999999999999988765
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.5e-35 Score=278.81 Aligned_cols=232 Identities=17% Similarity=0.251 Sum_probs=205.3
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY- 267 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~- 267 (446)
.|.+++| ++++|++|+.||+|++|++.+.... .....|...|.++.+ +|++. +|++|+.|+.|++|++.+.
T Consensus 57 ~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~---~~~~~~~~~v~~~~~--s~~~~-~l~s~~~d~~v~iw~~~~~~ 130 (340)
T 1got_B 57 KIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKV---HAIPLRSSWVMTCAY--APSGN-YVACGGLDNICSIYNLKTRE 130 (340)
T ss_dssp CEEEEEECTTSSEEEEEETTTEEEEEETTTCCEE---EEEECSSSCEEEEEE--CTTSS-EEEEEETTCEEEEEETTTCS
T ss_pred ceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcc---eEeecCCccEEEEEE--CCCCC-EEEEEeCCCeEEEEECccCC
Confidence 5999998 8899999999999999999877543 455678888888887 99988 6999999999999999765
Q ss_pred ---eeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEE
Q 013282 268 ---QLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 268 ---~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
+....+. |...|.++.|+|++. +++++.|+.|++||+++++.+..+.+|.+.|.+++|+|++++|++|+.|++|+
T Consensus 131 ~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~ 209 (340)
T 1got_B 131 GNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAK 209 (340)
T ss_dssp BSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred CcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEE
Confidence 3444454 888999999998765 88999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec--cccCeEEEEEcCCCCcEEEE
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID--FFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~ 421 (446)
+||++. +.++..+.+|...|++++|+|++++|++|+.||.|++||++++..+..+.. +...|.+++|+|+|++|++|
T Consensus 210 ~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g 288 (340)
T 1got_B 210 LWDVRE-GMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAG 288 (340)
T ss_dssp EEETTT-CSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEE
T ss_pred EEECCC-CeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEE
Confidence 999976 788899999999999999999999999999999999999999877665542 23479999999999999999
Q ss_pred EecCCcceE
Q 013282 422 VWDRTYGSL 430 (446)
Q Consensus 422 ~~D~~~~~~ 430 (446)
+.|+.+..|
T Consensus 289 ~~d~~i~vw 297 (340)
T 1got_B 289 YDDFNCNVW 297 (340)
T ss_dssp ETTSEEEEE
T ss_pred CCCCeEEEE
Confidence 999887654
No 20
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1e-34 Score=294.95 Aligned_cols=255 Identities=20% Similarity=0.318 Sum_probs=220.0
Q ss_pred EEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCee
Q 013282 145 VYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS 222 (446)
Q Consensus 145 v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~ 222 (446)
+....++.|++|+..... +..+.+|.. .|.++++ ++++|++|+.+|.|++|+... .
T Consensus 319 ~t~~~d~~i~~w~~~~~~---~~~~~~~~~----------------~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~-- 376 (577)
T 2ymu_A 319 ASASDDKTVKLWNRNGQH---LQTLTGHSS----------------SVWGVAFSPDGQTIASASDDKTVKLWNRNG-Q-- 376 (577)
T ss_dssp EEEETTSCEEEEETTSCE---EEEECCCSS----------------CEEEEEECTTSSEEEEEETTSEEEEEETTC-C--
T ss_pred EEEeCCCeEEEEeCCCCe---eEEEeCCCC----------------CEEEEEECCCCCEEEEEeCCCEEEEEcCCC-C--
Confidence 344567889999965432 223333321 5888888 899999999999999999643 2
Q ss_pred eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEE
Q 013282 223 FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGL 301 (446)
Q Consensus 223 ~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~ 301 (446)
....+..|...|.++.+ +|+++ +|++++.|+.|++||. +++.+..+. |...|.+++|+|++++|++++.|+.|+
T Consensus 377 -~~~~~~~~~~~v~~~~~--s~dg~-~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~ 451 (577)
T 2ymu_A 377 -LLQTLTGHSSSVRGVAF--SPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVK 451 (577)
T ss_dssp -EEEEEECCSSCEEEEEE--CTTSS-CEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred -EEEEecCCCCCeEEEEE--CCCCC-EEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEE
Confidence 23556678888999888 99998 6999999999999996 456666666 899999999999999999999999999
Q ss_pred EEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeC
Q 013282 302 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 302 i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~ 381 (446)
+||. +++.+..+.+|...|.+++|+|++++|++++.|++|++||. + ++++..+.+|...|++++|+|+|++||+++.
T Consensus 452 ~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~-~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~ 528 (577)
T 2ymu_A 452 LWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD 528 (577)
T ss_dssp EEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSSCEEEEET
T ss_pred EEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-C-CCEEEEEeCCCCCEEEEEEcCCCCEEEEEEC
Confidence 9995 67788899999999999999999999999999999999996 4 6888999999999999999999999999999
Q ss_pred CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 382 ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 382 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
|+.|++||. +++.+..+.+|.+.|.+++|+|||++|++++.|+++..|
T Consensus 529 dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~W 576 (577)
T 2ymu_A 529 DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLW 576 (577)
T ss_dssp TSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEE
T ss_pred cCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEe
Confidence 999999995 677888999999999999999999999999999998765
No 21
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.6e-35 Score=280.25 Aligned_cols=238 Identities=15% Similarity=0.141 Sum_probs=203.2
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY- 267 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~- 267 (446)
.|.+++| ++++||+|+.||+|+||++.............+|...|.+++| +|++. +|++|+.|++|++|++.++
T Consensus 18 ~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~--sp~g~-~l~s~s~D~~v~iw~~~~~~ 94 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAW--SPCGN-YLASASFDATTCIWKKNQDD 94 (345)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEEECCC-
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEE--CCCCC-EEEEEECCCcEEEEEccCCC
Confidence 5888888 8999999999999999999776433223344678999999988 99988 6999999999999998765
Q ss_pred -eeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCc---eEEEecCCCCceeEEEECCCCCEEEEEeCCCcE
Q 013282 268 -QLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGK---TIASLCGHLDFSFASAWHPNGVTFATGNQDKTC 342 (446)
Q Consensus 268 -~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v 342 (446)
+++..+. |..+|.+++|+|++++|++|+.|+.|++||++++. .+..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 95 ~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i 174 (345)
T 3fm0_A 95 FECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTV 174 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCE
T ss_pred eEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcE
Confidence 4556666 88999999999999999999999999999998763 466788999999999999999999999999999
Q ss_pred EEEEccCCC-cceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC---------------eeEeEeec-cccC
Q 013282 343 RIWDLRNLS-ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG---------------YEKEQEID-FFGE 405 (446)
Q Consensus 343 ~iwd~~~~~-~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~---------------~~~~~~~~-~~~~ 405 (446)
++||++... .+...+.+|...|++++|+|+|++|++|+.|+.|+||+.... .++..+.+ |...
T Consensus 175 ~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 254 (345)
T 3fm0_A 175 KLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRT 254 (345)
T ss_dssp EEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSC
T ss_pred EEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCc
Confidence 999997522 245788899999999999999999999999999999996322 22333444 7789
Q ss_pred eEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 406 ISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
|.+++|+|++..|++++.|+.+..+-
T Consensus 255 v~~v~~~~~~~~l~s~~~d~~i~vw~ 280 (345)
T 3fm0_A 255 IYDIAWCQLTGALATACGDDAIRVFQ 280 (345)
T ss_dssp EEEEEECTTTCCEEEEETTSCEEEEE
T ss_pred EEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 99999999999999999999987764
No 22
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.5e-35 Score=272.63 Aligned_cols=237 Identities=14% Similarity=0.145 Sum_probs=198.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|.+++| ++++||+|+.||+|+||++..... .+...+.+|.+.|.++.| +|. +. +|++|+.|++|++||+.+
T Consensus 11 ~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~-~~~~~l~gH~~~V~~v~~--s~~~~g~-~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 11 MIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDW--AHPKFGT-ILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB-CCCEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTTEEEEEEBSS
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc-EEEEEEccccCCeEEEEe--cCCCcCC-EEEEEcCCCEEEEEEcCC
Confidence 6888888 899999999999999999975422 123566789999999988 653 55 799999999999999987
Q ss_pred ce--eeEeee-CCCCeeEEEECCC--CCEEEEEecCCcEEEEECCCCc--eEEEecCCCCceeEEEECCC----------
Q 013282 267 YQ--LSKHFR-FPWPVNHSSQSPD--GKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHPN---------- 329 (446)
Q Consensus 267 ~~--~~~~~~-~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~p~---------- 329 (446)
++ .+..+. |...|.+++|+|+ +.+|++++.|+.|++||++++. ....+.+|...|.+++|+|+
T Consensus 87 ~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~ 166 (297)
T 2pm7_B 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (297)
T ss_dssp SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC---------
T ss_pred CceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCcccccccCCC
Confidence 74 444454 8889999999997 8999999999999999998763 24567789999999999997
Q ss_pred ---CCEEEEEeCCCcEEEEEccCCCc---ceEEEecCCCceEEEEEccCC---CEEEEEeCCCeEEEEEcCCCe---eEe
Q 013282 330 ---GVTFATGNQDKTCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTSDG---RYMATAEPADFVHVYDVKSGY---EKE 397 (446)
Q Consensus 330 ---~~~l~sgs~d~~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~s~dg---~~l~~~~~dg~i~iwd~~~~~---~~~ 397 (446)
+++|++|+.|++|++||++.... ....+.+|...|++++|+|++ ++||+++.|+.|+|||+.++. ...
T Consensus 167 ~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~ 246 (297)
T 2pm7_B 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKT 246 (297)
T ss_dssp ---CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred CCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcccee
Confidence 57999999999999999976332 556788999999999999995 899999999999999998743 112
Q ss_pred Ee--eccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 398 QE--IDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 398 ~~--~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
.+ ..|...|.+++|+|+|++|++++.|+++..|-
T Consensus 247 ~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~ 282 (297)
T 2pm7_B 247 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282 (297)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEE
T ss_pred eeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 22 35778899999999999999999999987664
No 23
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=7.4e-35 Score=298.27 Aligned_cols=286 Identities=18% Similarity=0.270 Sum_probs=232.6
Q ss_pred cceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccce
Q 013282 112 ASYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQ 191 (446)
Q Consensus 112 ~~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 191 (446)
.....|..|...+.+..++++.+.++. ...++.|++|+..++.......+.+|.. .
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~las--------g~~d~~v~lWd~~~~~~~~~~~~~~~~~----------------~ 105 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCAS--------GDVHGNVRIWDTTQTTHILKTTIPVFSG----------------P 105 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEE--------EETTSEEEEEESSSTTCCEEEEEECSSS----------------C
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEE--------EeCCCCEEEeECCCCcceeeEeecccCC----------------c
Confidence 344456666666777766665544433 3346788999987655444444444322 5
Q ss_pred EEEEEe--CCcEEEEeccC----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 192 VSTLAV--KDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
|.+++| ++++|++++.+ +.|++|+... . ...+.+|...|.+++| +|++...|++|+.|++|++||..
T Consensus 106 v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~--~---~~~l~gh~~~v~~v~f--~p~~~~~l~s~s~D~~v~lwd~~ 178 (611)
T 1nr0_A 106 VKDISWDSESKRIAAVGEGRERFGHVFLFDTGT--S---NGNLTGQARAMNSVDF--KPSRPFRIISGSDDNTVAIFEGP 178 (611)
T ss_dssp EEEEEECTTSCEEEEEECCSSCSEEEEETTTCC--B---CBCCCCCSSCEEEEEE--CSSSSCEEEEEETTSCEEEEETT
T ss_pred eEEEEECCCCCEEEEEECCCCceeEEEEeeCCC--C---cceecCCCCCceEEEE--CCCCCeEEEEEeCCCeEEEEECC
Confidence 899999 88999988865 4777887432 2 2345689999999988 99987679999999999999999
Q ss_pred cceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec-------CCCCceeEEEECCCCCEEEEEe
Q 013282 266 KYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-------GHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 266 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~v~~~~~~p~~~~l~sgs 337 (446)
++++...+. |...|.+++|+|++++|++++.|++|++||+.+++.+..+. +|.+.|.+++|+|+|++|++|+
T Consensus 179 ~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s 258 (611)
T 1nr0_A 179 PFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS 258 (611)
T ss_dssp TBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE
T ss_pred CCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe
Confidence 999888887 89999999999999999999999999999999999988884 7999999999999999999999
Q ss_pred CCCcEEEEEccCCCcce-------------------------------------------EEEecCCCceEEEEEccCCC
Q 013282 338 QDKTCRIWDLRNLSESV-------------------------------------------AVLKGNLGAIRSIRYTSDGR 374 (446)
Q Consensus 338 ~d~~v~iwd~~~~~~~~-------------------------------------------~~~~~~~~~v~~l~~s~dg~ 374 (446)
.|++|++||+++ ++.+ ..+.+|...|++++|+|+|+
T Consensus 259 ~D~~v~lWd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~ 337 (611)
T 1nr0_A 259 ADKTIKIWNVAT-LKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK 337 (611)
T ss_dssp TTSEEEEEETTT-TEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred CCCeEEEEeCCC-CceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC
Confidence 999999999965 3322 34457899999999999999
Q ss_pred EEEEEeCCCeEEEEEcCCCeeEeEe-eccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 375 YMATAEPADFVHVYDVKSGYEKEQE-IDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 375 ~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+|++++.|+.|++||+.++.....+ ..|...|.+++|++++ .|+++++|++++.|
T Consensus 338 ~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~-~l~s~s~d~~v~~w 393 (611)
T 1nr0_A 338 TLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKG-DLFTVSWDDHLKVV 393 (611)
T ss_dssp EEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTS-CEEEEETTTEEEEE
T ss_pred EEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCC-cEEEEEcCCceEEe
Confidence 9999999999999999998776554 4688999999999875 68889999877654
No 24
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-34 Score=273.80 Aligned_cols=237 Identities=16% Similarity=0.165 Sum_probs=196.1
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-CCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc---
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK--- 266 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~--- 266 (446)
.|.++++.+.+||+|+.||+|++|++.............. |...|.++.| +|++. +|++|+.|++|++|++..
T Consensus 16 ~v~~~~~s~~~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~--sp~~~-~las~s~D~~v~iw~~~~~~~ 92 (330)
T 2hes_X 16 KIWSFDFSQGILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAW--RPHTS-LLAAGSFDSTVSIWAKEESAD 92 (330)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEE--CTTSS-EEEEEETTSCEEEEEC-----
T ss_pred ceeeeccCCCEEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEE--CCCCC-EEEEEeCCCcEEEEEcccCcC
Confidence 6999999767999999999999999976543222222133 8889999988 99987 799999999999999853
Q ss_pred ----ceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC----CceEEEecCCCCceeEEEECCCCCEEEEEe
Q 013282 267 ----YQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT----GKTIASLCGHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 267 ----~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs 337 (446)
.+++..+. |...|.+++|+|++++|++|+.|++|++||++. .+++..+.+|...|.+++|+|++.+|++|+
T Consensus 93 ~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 172 (330)
T 2hes_X 93 RTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSS 172 (330)
T ss_dssp --CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEE
T ss_pred ccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEc
Confidence 34555565 889999999999999999999999999999953 256778899999999999999999999999
Q ss_pred CCCcEEEEEccCCC-cceEEEecCCCceEEEEEccC--CCEEEEEeCCCeEEEEEcCCC--------eeEeEeec-cccC
Q 013282 338 QDKTCRIWDLRNLS-ESVAVLKGNLGAIRSIRYTSD--GRYMATAEPADFVHVYDVKSG--------YEKEQEID-FFGE 405 (446)
Q Consensus 338 ~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~l~~s~d--g~~l~~~~~dg~i~iwd~~~~--------~~~~~~~~-~~~~ 405 (446)
.|++|++||++... .++..+.+|.+.|.+++|+|+ +.+|++|+.|+.|++||+.++ .....+.. |...
T Consensus 173 ~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~ 252 (330)
T 2hes_X 173 YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQ 252 (330)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSC
T ss_pred CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccc
Confidence 99999999986521 577889999999999999999 779999999999999998754 23344444 8889
Q ss_pred eEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 406 ISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
|.+++|++++ +|++++.|+++..|-
T Consensus 253 v~~v~~s~~~-~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 253 VYNVAWGFNG-LIASVGADGVLAVYE 277 (330)
T ss_dssp EEEEEECTTS-CEEEEETTSCEEEEE
T ss_pred eEEEEEcCCC-EEEEEeCCCEEEEEE
Confidence 9999999765 899999999987663
No 25
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.2e-34 Score=270.77 Aligned_cols=229 Identities=19% Similarity=0.230 Sum_probs=203.5
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCe--eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGV--SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~--~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
.|.++++ .+++|++|+.||+|++|++..... ......+.+|...|.++.+ +|++. +|++|+.|++|++||+.
T Consensus 19 ~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~--s~dg~-~l~s~s~D~~v~~wd~~ 95 (319)
T 3frx_A 19 WVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTL--TADGA-YALSASWDKTLRLWDVA 95 (319)
T ss_dssp CEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETT
T ss_pred eEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEE--CCCCC-EEEEEeCCCEEEEEECC
Confidence 5999998 348999999999999999865432 2334667889999999988 99988 69999999999999999
Q ss_pred cceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCC------CCEEEEEeC
Q 013282 266 KYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN------GVTFATGNQ 338 (446)
Q Consensus 266 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~------~~~l~sgs~ 338 (446)
+++++..+. |...|.+++|+|++++|++|+.|+.|++||++ ++.+..+.+|...|.+++|+|. +..|++|+.
T Consensus 96 ~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 174 (319)
T 3frx_A 96 TGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN 174 (319)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEET
T ss_pred CCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC
Confidence 999988887 89999999999999999999999999999986 5678888999999999999995 458999999
Q ss_pred CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcE
Q 013282 339 DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL 418 (446)
Q Consensus 339 d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l 418 (446)
|++|++||++. .+....+.+|...|++++|+|+|++|++|+.||.|++||+.+++.+..+.. ...|.+++|+|++.+|
T Consensus 175 d~~i~~wd~~~-~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l 252 (319)
T 3frx_A 175 DKMVKAWNLNQ-FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA-QDEVFSLAFSPNRYWL 252 (319)
T ss_dssp TSCEEEEETTT-TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-CSCEEEEEECSSSSEE
T ss_pred CCEEEEEECCc-chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC-CCcEEEEEEcCCCCEE
Confidence 99999999976 777888999999999999999999999999999999999999988877764 5689999999999999
Q ss_pred EEEEecC
Q 013282 419 FIGVWDR 425 (446)
Q Consensus 419 ~~~~~D~ 425 (446)
+++..++
T Consensus 253 a~~~~~~ 259 (319)
T 3frx_A 253 AAATATG 259 (319)
T ss_dssp EEEETTE
T ss_pred EEEcCCC
Confidence 8876543
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.3e-34 Score=274.92 Aligned_cols=238 Identities=16% Similarity=0.107 Sum_probs=198.7
Q ss_pred eeeEEecccCeEEEecCCeEEEEecCCCCceEEEe--cCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCC
Q 013282 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLN--VSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG 209 (446)
Q Consensus 134 ~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~--~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg 209 (446)
..+.|......+....++.|++|+..+++...... ..||-. .|.+++| ++++|++|+.||
T Consensus 86 ~~~~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~----------------~V~~v~~spdg~~l~sgs~d~ 149 (344)
T 4gqb_B 86 ADLTWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDD----------------IVSTVSVLSSGTQAVSGSKDI 149 (344)
T ss_dssp EEEEEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSS----------------CEEEEEECTTSSEEEEEETTS
T ss_pred EEEEEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCC----------------CEEEEEECCCCCEEEEEeCCC
Confidence 34556666666667779999999998887544433 334422 5999998 899999999999
Q ss_pred cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee---CCCCeeEEEECC
Q 013282 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR---FPWPVNHSSQSP 286 (446)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~sp 286 (446)
+|++|++.+.. +...+.+|...|.++.| ++++..+|++++.|++|++||+.++++...+. +...+.+++|+|
T Consensus 150 ~i~iwd~~~~~---~~~~~~~h~~~V~~~~~--~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 150 CIKVWDLAQQV---VLSSYRAHAAQVTCVAA--SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp CEEEEETTTTE---EEEEECCCSSCEEEEEE--CSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECS
T ss_pred eEEEEECCCCc---EEEEEcCcCCceEEEEe--cCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecC
Confidence 99999998763 34667789999999988 89987789999999999999999998887765 456799999999
Q ss_pred -CCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCC-CEEEEEeCCCcEEEEEccCCCcceEEEecCCCce
Q 013282 287 -DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 364 (446)
Q Consensus 287 -~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v 364 (446)
++++|++|+.|+.|++||+++++++..+.+|...|.+++|+|++ ++||+|+.|++|+|||++. ++ +..+.+|.+.|
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-~~-~~~~~~H~~~V 302 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-SE-LFRSQAHRDFV 302 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-CE-EEEECCCSSCE
T ss_pred CCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-Cc-EEEEcCCCCCE
Confidence 56788999999999999999999999999999999999999987 6899999999999999965 44 45678999999
Q ss_pred EEEEEccCCC-EEEEEeCCCeEEEEEcCCCe
Q 013282 365 RSIRYTSDGR-YMATAEPADFVHVYDVKSGY 394 (446)
Q Consensus 365 ~~l~~s~dg~-~l~~~~~dg~i~iwd~~~~~ 394 (446)
++++|+|+++ +|++|+.|++|++|++.+..
T Consensus 303 ~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 303 RDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999986 67799999999999998753
No 27
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-34 Score=280.44 Aligned_cols=285 Identities=12% Similarity=0.064 Sum_probs=232.3
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCC----ceEEEecCCCCCCCCCCCCCccccCccce
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSS----RSQVLNVSGHVAPSEKHPGSLLEGFTQTQ 191 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~----~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 191 (446)
.++.+...+.++.+++ +.+ +....++.|++|+..++. ......+.+|.. .
T Consensus 11 ~~~~h~~~i~~~~~~~--~~l--------~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~----------------~ 64 (397)
T 1sq9_A 11 AGKAHDADIFSVSACN--SFT--------VSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKS----------------G 64 (397)
T ss_dssp ESSCSSSCEEEEEECS--SEE--------EEEETTSEEEEEESBCCTTCCGGGGEEEEECCTT----------------C
T ss_pred hhhhhhcCeEEEEecC--CeE--------EEEcCCCEEEEEECCCcccccCCCcceEEecCCC----------------c
Confidence 3445666777777665 222 333456788999998776 112333333322 5
Q ss_pred EEEEEe--C----C---cEEEEeccCCcEEEEEcCCCCe--eeEEEEeecC-----CCceeeEEEEeC----CCCCeEEE
Q 013282 192 VSTLAV--K----D---KLLVAGGFQGELICKHLDRPGV--SFCSRTTYDD-----NAITNAVEIYGS----PSGAVHFT 251 (446)
Q Consensus 192 v~~l~~--~----~---~~l~tg~~dg~i~vw~~~~~~~--~~~~~~~~~~-----~~~v~~i~~~~s----~~~~~~l~ 251 (446)
|.+++| + + ++|++|+.||.|++|++..... .........| ...|.++.+ + |++...|+
T Consensus 65 v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~~l~ 142 (397)
T 1sq9_A 65 LHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKW--GASNDRLLSHRLV 142 (397)
T ss_dssp EEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEE--ECCC----CEEEE
T ss_pred EEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEE--eeccCCCCceEEE
Confidence 888888 6 7 8999999999999999987653 1112344455 478888888 7 88873299
Q ss_pred EEeCCCcEEEEecCc------ceeeE-----eee--------CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEE
Q 013282 252 ASNNDCGVRDFDMGK------YQLSK-----HFR--------FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIA 312 (446)
Q Consensus 252 s~s~dg~v~iwd~~~------~~~~~-----~~~--------~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~ 312 (446)
+++.||.|++||+.+ ++.+. .+. +...|.+++|+|++ +|++++.++.|++||+++++.+.
T Consensus 143 ~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 143 ATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLY 221 (397)
T ss_dssp EEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEE
T ss_pred EEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeE
Confidence 999999999999988 66554 552 68889999999999 99999999999999999999999
Q ss_pred EecC---C---CCceeEEEECCCCCEEEEEeCC---CcEEEEEccCCCcceEEEec-------------CCCceEEEEEc
Q 013282 313 SLCG---H---LDFSFASAWHPNGVTFATGNQD---KTCRIWDLRNLSESVAVLKG-------------NLGAIRSIRYT 370 (446)
Q Consensus 313 ~~~~---~---~~~v~~~~~~p~~~~l~sgs~d---~~v~iwd~~~~~~~~~~~~~-------------~~~~v~~l~~s 370 (446)
.+.. | ...|.+++|+|++++|++++.| +.|++||++. .+++..+.+ |...|.+++|+
T Consensus 222 ~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 300 (397)
T 1sq9_A 222 NFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEF-GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFN 300 (397)
T ss_dssp EEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTT-CCEEEEECBC--------CCBSBSSCEEEEEEC
T ss_pred EEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCC-CcccceeccCcccccccccccccCCcEEEEEEC
Confidence 9998 9 9999999999999999999999 9999999976 788888888 99999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCeeEeEee------cc---------------ccCeEEEEEcCCC----------CcEE
Q 013282 371 SDGRYMATAEPADFVHVYDVKSGYEKEQEI------DF---------------FGEISGISFSPDT----------ESLF 419 (446)
Q Consensus 371 ~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~------~~---------------~~~v~~~~~spdg----------~~l~ 419 (446)
|++++|++++.||.|++||+.+++.+..+. .| ...|.+++|+|+| ++|+
T Consensus 301 ~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~ 380 (397)
T 1sq9_A 301 DSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLC 380 (397)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEE
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEE
Confidence 999999999999999999999999999888 77 8999999999998 7999
Q ss_pred EEEecCCcceE
Q 013282 420 IGVWDRTYGSL 430 (446)
Q Consensus 420 ~~~~D~~~~~~ 430 (446)
+++.|+.+..|
T Consensus 381 s~~~dg~i~iw 391 (397)
T 1sq9_A 381 CVCLDRSIRWF 391 (397)
T ss_dssp EEETTTEEEEE
T ss_pred EecCCCcEEEE
Confidence 99999988765
No 28
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=5.9e-33 Score=261.72 Aligned_cols=280 Identities=15% Similarity=0.176 Sum_probs=230.5
Q ss_pred eeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCce---EEEecCCCCCCCCCCCCCccccCccceEEE
Q 013282 118 RRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRS---QVLNVSGHVAPSEKHPGSLLEGFTQTQVST 194 (446)
Q Consensus 118 ~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~ 194 (446)
..+...+.+..++++.+ .++...++.|.+|+..++... ..+...++ ...|.+
T Consensus 48 ~~h~~~v~~~~~~~~~~---------~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~----------------~~~v~~ 102 (337)
T 1gxr_A 48 LNHGEVVCAVTISNPTR---------HVYTGGKGCVKVWDISHPGNKSPVSQLDCLNR----------------DNYIRS 102 (337)
T ss_dssp ECCSSCCCEEEECSSSS---------EEEEECBSEEEEEETTSTTCCSCSEEEECSCT----------------TSBEEE
T ss_pred ccCCCceEEEEEecCCc---------EEEEcCCCeEEEEECCCCCceeeeecccccCC----------------CCcEEE
Confidence 34555566655555443 333444678999998776421 11211121 126889
Q ss_pred EEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEe
Q 013282 195 LAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH 272 (446)
Q Consensus 195 l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~ 272 (446)
+++ ++++|++|+.+|.|++|++...... .......|...+.++.+ +|++. ++++++.||.|++||+.+++.+..
T Consensus 103 ~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~-~~~~~~~~~~~i~~~~~--~~~~~-~l~~~~~dg~v~~~d~~~~~~~~~ 178 (337)
T 1gxr_A 103 CKLLPDGCTLIVGGEASTLSIWDLAAPTPR-IKAELTSSAPACYALAI--SPDSK-VCFSCCSDGNIAVWDLHNQTLVRQ 178 (337)
T ss_dssp EEECTTSSEEEEEESSSEEEEEECCCC--E-EEEEEECSSSCEEEEEE--CTTSS-EEEEEETTSCEEEEETTTTEEEEE
T ss_pred EEEcCCCCEEEEEcCCCcEEEEECCCCCcc-eeeecccCCCceEEEEE--CCCCC-EEEEEeCCCcEEEEeCCCCceeee
Confidence 988 7899999999999999999876532 23455677888888887 89887 689999999999999999999888
Q ss_pred ee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q 013282 273 FR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS 351 (446)
Q Consensus 273 ~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~ 351 (446)
+. |...|.+++|+|++++|++++.++.|++||+++++.+..+. +...+.+++|+|++++|++++.++.|++||++. .
T Consensus 179 ~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~-~ 256 (337)
T 1gxr_A 179 FQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNK-P 256 (337)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTS-S
T ss_pred eecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCC-C
Confidence 87 88899999999999999999999999999999999888775 778899999999999999999999999999975 3
Q ss_pred cceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 352 ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 352 ~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
. ...+..|...|.+++|+|++++|++++.||.|++||+.+++.+.. ..|...|.+++|+|++++|++++.|+.+..|
T Consensus 257 ~-~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~-~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw 333 (337)
T 1gxr_A 257 D-KYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQ-SKESSSVLSCDISVDDKYIVTGSGDKKATVY 333 (337)
T ss_dssp C-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE-EECSSCEEEEEECTTSCEEEEEETTSCEEEE
T ss_pred C-eEEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEE-ecCCCcEEEEEECCCCCEEEEecCCCeEEEE
Confidence 3 456778999999999999999999999999999999999877644 4588899999999999999999999988765
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.4e-34 Score=271.62 Aligned_cols=233 Identities=19% Similarity=0.238 Sum_probs=204.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY- 267 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~- 267 (446)
.|.+++| ++++|++|+.||+|++|+..+.... .....|...|.++.+ +|++. .|++++.|+.+++|++...
T Consensus 66 ~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~---~~~~~~~~~v~~~~~--sp~g~-~lasg~~d~~i~v~~~~~~~ 139 (354)
T 2pbi_B 66 KVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE---HAVTMPCTWVMACAY--APSGC-AIACGGLDNKCSVYPLTFDK 139 (354)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---EEEECSSSCCCEEEE--CTTSS-EEEEESTTSEEEEEECCCCT
T ss_pred eEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcc---eEEecCCCCEEEEEE--CCCCC-EEEEeeCCCCEEEEEEeccc
Confidence 5999999 8899999999999999998776543 344567777888877 99998 6999999999999998643
Q ss_pred -----eeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECC--CCCEEEEEeCC
Q 013282 268 -----QLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP--NGVTFATGNQD 339 (446)
Q Consensus 268 -----~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p--~~~~l~sgs~d 339 (446)
.....+. |...|.+++|+|++..|++++.|++|++||+++++++..+.+|...|.+++|+| +|++|++|+.|
T Consensus 140 ~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~D 219 (354)
T 2pbi_B 140 NENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCD 219 (354)
T ss_dssp TCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETT
T ss_pred cccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCC
Confidence 2233343 889999999999999999999999999999999999999999999999999988 57899999999
Q ss_pred CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc--ccCeEEEEEcCCCCc
Q 013282 340 KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF--FGEISGISFSPDTES 417 (446)
Q Consensus 340 ~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~--~~~v~~~~~spdg~~ 417 (446)
|+|++||++. ++++..+.+|...|++++|+|++++|++|+.|+.|++||++++..+..+..+ ...+.+++|+|+|++
T Consensus 220 g~v~~wd~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 220 KKAMVWDMRS-GQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp SCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred CeEEEEECCC-CcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCE
Confidence 9999999976 7888999999999999999999999999999999999999998766655433 347899999999999
Q ss_pred EEEEEecCCcceE
Q 013282 418 LFIGVWDRTYGSL 430 (446)
Q Consensus 418 l~~~~~D~~~~~~ 430 (446)
|++|+.|+++..|
T Consensus 299 l~~g~~d~~i~vw 311 (354)
T 2pbi_B 299 LFAGYNDYTINVW 311 (354)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEEECCCcEEEE
Confidence 9999999987655
No 30
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=1.2e-33 Score=268.55 Aligned_cols=233 Identities=17% Similarity=0.220 Sum_probs=197.2
Q ss_pred eEEEEEe--------CCcEEEEeccCCcEEEEEcCCCC----eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCc
Q 013282 191 QVSTLAV--------KDKLLVAGGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG 258 (446)
Q Consensus 191 ~v~~l~~--------~~~~l~tg~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~ 258 (446)
.|.++++ ++++|++|+.||+|++|++.... .......+.+|...|.++.+ +|++. ++++++.|++
T Consensus 23 ~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~--~~~~~-~l~s~s~D~~ 99 (343)
T 2xzm_R 23 WVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLAL--SQENC-FAISSSWDKT 99 (343)
T ss_dssp CEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEE--CSSTT-EEEEEETTSE
T ss_pred hhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEE--CCCCC-EEEEEcCCCc
Confidence 5888877 78899999999999999997543 12334567789999999988 89987 6999999999
Q ss_pred EEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec---CCCCceeEEEECCCC----
Q 013282 259 VRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC---GHLDFSFASAWHPNG---- 330 (446)
Q Consensus 259 v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---~~~~~v~~~~~~p~~---- 330 (446)
|++||+.+++.+..+. |...|.+++|+|++++|++++.|+.|++||+... ....+. +|...|.+++|+|++
T Consensus 100 v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 178 (343)
T 2xzm_R 100 LRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSAN 178 (343)
T ss_dssp EEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCS
T ss_pred EEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeecccccccc
Confidence 9999999999988887 8999999999999999999999999999999844 333333 688999999999987
Q ss_pred ------CEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc
Q 013282 331 ------VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 404 (446)
Q Consensus 331 ------~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 404 (446)
.+|++++.|++|++||. . ......+.+|...|++++|+|+|++|++|+.||.|++||+.+.........+..
T Consensus 179 ~~~~~~~~l~s~~~d~~i~iwd~-~-~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~ 256 (343)
T 2xzm_R 179 KVQPFAPYFASVGWDGRLKVWNT-N-FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGS 256 (343)
T ss_dssp CCCSSCCEEEEEETTSEEEEEET-T-TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSS
T ss_pred ccCCCCCEEEEEcCCCEEEEEcC-C-CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCC
Confidence 79999999999999995 3 567788899999999999999999999999999999999955433333444567
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 405 EISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 405 ~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.|.+++|+|++++|+ ++.|+.+..|
T Consensus 257 ~v~~v~~sp~~~~la-~~~d~~v~iw 281 (343)
T 2xzm_R 257 TINQIAFNPKLQWVA-VGTDQGVKIF 281 (343)
T ss_dssp CEEEEEECSSSCEEE-EEESSCEEEE
T ss_pred cEEEEEECCCCCEEE-EECCCCEEEE
Confidence 799999999998776 4567766544
No 31
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-33 Score=265.49 Aligned_cols=284 Identities=15% Similarity=0.116 Sum_probs=236.7
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
....+..|...+.++.++++.+.++.+ ..++.|.+|+..+++... .+.+|.. .|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~--------~~dg~i~vwd~~~~~~~~--~~~~h~~----------------~v 77 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSC--------SKDSSASVWYSLNGERLG--TLDGHTG----------------TI 77 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEE--------ESSSCEEEEETTTCCEEE--EECCCSS----------------CE
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEE--------eCCCEEEEEeCCCchhhh--hhhhcCC----------------cE
Confidence 346678888888888888765555443 346778999988775433 3333322 58
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-----CcEEEEecC
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMG 265 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-----g~v~iwd~~ 265 (446)
.+++| ++++|++|+.||.|++|++.+..... ... +...+.++.+ +|++. .+++++.+ +.|++||+.
T Consensus 78 ~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---~~~-~~~~v~~~~~--~~~~~-~l~~~~~~~~~~~g~i~~~d~~ 150 (369)
T 3zwl_B 78 WSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVA---TWK-SPVPVKRVEF--SPCGN-YFLAILDNVMKNPGSINIYEIE 150 (369)
T ss_dssp EEEEECTTSSEEEEEETTTEEEEEETTTCCEEE---EEE-CSSCEEEEEE--CTTSS-EEEEEECCBTTBCCEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEE---Eee-cCCCeEEEEE--ccCCC-EEEEecCCccCCCCEEEEEEec
Confidence 89998 78999999999999999998876442 222 6677888877 99988 68888888 999999997
Q ss_pred ccee-----------eEeee-CCC--CeeEEEECCCCCEEEEEecCCcEEEEECCC-CceEEEecCCCCceeEEEECCCC
Q 013282 266 KYQL-----------SKHFR-FPW--PVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNG 330 (446)
Q Consensus 266 ~~~~-----------~~~~~-~~~--~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~p~~ 330 (446)
.... ...+. +.. .+.+++|+|++++|++++.++.|++||+++ ++.+..+..|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~ 230 (369)
T 3zwl_B 151 RDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDL 230 (369)
T ss_dssp ECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred CCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCC
Confidence 6532 22222 333 899999999999999999999999999998 78889999999999999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCC--------------eEEEEEcCCCeeE
Q 013282 331 VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD--------------FVHVYDVKSGYEK 396 (446)
Q Consensus 331 ~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg--------------~i~iwd~~~~~~~ 396 (446)
++|++++.|+.|++||++. .+.+..+. +...+.+++|+|+++++++++.++ .|++||+.+++.+
T Consensus 231 ~~l~~~~~d~~i~v~d~~~-~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~ 308 (369)
T 3zwl_B 231 TYFITSSRDTNSFLVDVST-LQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEI 308 (369)
T ss_dssp SEEEEEETTSEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEE
T ss_pred CEEEEecCCceEEEEECCC-Cceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcch
Confidence 9999999999999999976 67777776 678899999999999999999988 8999999999999
Q ss_pred eEeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 397 EQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 397 ~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
..+.+|.+.|.+++|+|++++|++++.|+.+..|-
T Consensus 309 ~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~ 343 (369)
T 3zwl_B 309 GRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHH 343 (369)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred hheecccCcEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 99999999999999999999999999999887664
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-33 Score=293.00 Aligned_cols=283 Identities=16% Similarity=0.199 Sum_probs=226.1
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc---eEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR---SQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~---~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
.++.|...|.++.+++....+ .+....|+.|++|+..+... .....+.||.. .|
T Consensus 377 ~l~~H~~~V~~v~~~~~~~~~-------l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~----------------~v 433 (694)
T 3dm0_A 377 TMRAHTDMVTAIATPIDNADI-------IVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSH----------------FV 433 (694)
T ss_dssp EEECCSSCEEEEECCTTCCSE-------EEEEETTSEEEEEECCCSTTCSCEEEEEEECCSS----------------CE
T ss_pred hcccCCceeEEEEecCCCCCE-------EEEEeCCCcEEEEEccCCCcccccccceecCCCC----------------cE
Confidence 355666666666655543222 23345578899999866432 22233444432 58
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.++++ ++++|++|+.||+|+||++.+.. +...+.+|...|.++.+ +|++. +|++++.|++|++||+......
T Consensus 434 ~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~---~~~~~~~h~~~v~~~~~--s~~~~-~l~s~s~D~~i~iwd~~~~~~~ 507 (694)
T 3dm0_A 434 EDVVLSSDGQFALSGSWDGELRLWDLAAGV---STRRFVGHTKDVLSVAF--SLDNR-QIVSASRDRTIKLWNTLGECKY 507 (694)
T ss_dssp EEEEECTTSSEEEEEETTSEEEEEETTTTE---EEEEEECCSSCEEEEEE--CTTSS-CEEEEETTSCEEEECTTSCEEE
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCc---ceeEEeCCCCCEEEEEE--eCCCC-EEEEEeCCCEEEEEECCCCcce
Confidence 88888 89999999999999999998763 34566789999999988 99988 6999999999999998665443
Q ss_pred Eee----eCCCCeeEEEECCCC--CEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 271 KHF----RFPWPVNHSSQSPDG--KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 271 ~~~----~~~~~v~~~~~sp~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
... .|...|.+++|+|++ ..|++++.|+.|++||+++++....+.+|.+.|.+++|+|++++|++|+.|++|++
T Consensus 508 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~i 587 (694)
T 3dm0_A 508 TISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLL 587 (694)
T ss_dssp EECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEE
T ss_pred eeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEE
Confidence 332 267789999999986 58999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc-------------------cC
Q 013282 345 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF-------------------GE 405 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------------------~~ 405 (446)
||+++ ++.+..+.. ...|.+++|+|++.+|++++ ++.|+|||+.++..+..+..+. ..
T Consensus 588 wd~~~-~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 664 (694)
T 3dm0_A 588 WDLAE-GKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIY 664 (694)
T ss_dssp EETTT-TEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTEEEEEECCCCC----------------CCCC
T ss_pred EECCC-CceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCCChhhhccccccccccccccccccCCceeEE
Confidence 99976 666666654 46799999999999888766 5569999999988776554221 13
Q ss_pred eEEEEEcCCCCcEEEEEecCCcceE
Q 013282 406 ISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+++++|+|+|++|++|+.|+++..|
T Consensus 665 ~~~l~~spdg~~l~sgs~Dg~i~iW 689 (694)
T 3dm0_A 665 CTSLNWSADGSTLFSGYTDGVIRVW 689 (694)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEE
T ss_pred eeeEEEcCCCCEEEEEcCCCeEEEE
Confidence 7889999999999999999998766
No 33
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-34 Score=276.11 Aligned_cols=284 Identities=13% Similarity=0.117 Sum_probs=227.5
Q ss_pred eccccccceeeccc---eeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 119 RNSRSVKSTILHFQ---LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 119 ~~~~~v~~~~~h~~---~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
.+...+.++.+++. ...+ .+....++.|.+|+..++.....+... ..+ .+...|.++
T Consensus 16 ~h~~~v~~i~~~p~~~~~~~~-------~~~~~~~~~v~vw~~~~~~~~~~~~~~--~~~-----------~~~~~v~~~ 75 (366)
T 3k26_A 16 DHNQPLFGVQFNWHSKEGDPL-------VFATVGSNRVTLYECHSQGEIRLLQSY--VDA-----------DADENFYTC 75 (366)
T ss_dssp TTCSCEEEEEECTTCCTTSCE-------EEEEEETTEEEEEEECGGGCEEEEEEE--ECS-----------CTTCCEEEE
T ss_pred CCCCceEEEEEecccCCCCce-------EEEECCCCEEEEEEcCCCcEEEeeeec--ccc-----------CCCCcEEEE
Confidence 35667777777764 1111 222333557899998877544333211 100 011258888
Q ss_pred Ee--C----CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCC-CCCeEEEEEeCCCcEEEEecCcce
Q 013282 196 AV--K----DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 196 ~~--~----~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~-~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
+| + +.+|++|+.||.|++|++.+.... ..+..|...|.++.+ +| ++. +|++++.||.|++||+.+++
T Consensus 76 ~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~---~~~~~~~~~i~~~~~--~~~~~~-~l~s~~~dg~i~iwd~~~~~ 149 (366)
T 3k26_A 76 AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI---KHYVGHGNAINELKF--HPRDPN-LLLSVSKDHALRLWNIQTDT 149 (366)
T ss_dssp EEEECTTTCCEEEEEEETTCEEEEECTTTCCEE---EEEESCCSCEEEEEE--CSSCTT-EEEEEETTSCEEEEETTTTE
T ss_pred EeccCCCCCCCEEEEecCCCEEEEEEchhceEe---eeecCCCCcEEEEEE--CCCCCC-EEEEEeCCCeEEEEEeecCe
Confidence 88 4 679999999999999999877543 455678899999988 89 665 79999999999999999999
Q ss_pred eeEee----eCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec----------------------------C
Q 013282 269 LSKHF----RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC----------------------------G 316 (446)
Q Consensus 269 ~~~~~----~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~ 316 (446)
.+..+ .|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +
T Consensus 150 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 150 LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 98887 388999999999999999999999999999999876554433 3
Q ss_pred CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCC-------------cceEEEecCCCceEEEEEccC--CCEEEEEeC
Q 013282 317 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS-------------ESVAVLKGNLGAIRSIRYTSD--GRYMATAEP 381 (446)
Q Consensus 317 ~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~-------------~~~~~~~~~~~~v~~l~~s~d--g~~l~~~~~ 381 (446)
|...|.+++|+ +++|++++.|+.|++||++... ..+..+..|...|++++|+|+ +++|++|+.
T Consensus 230 ~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~ 307 (366)
T 3k26_A 230 HRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQ 307 (366)
T ss_dssp CSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECT
T ss_pred CcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEec
Confidence 99999999998 7799999999999999997632 236778889999999999999 999999999
Q ss_pred CCeEEEEEcCCCee----EeEeecc--ccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 382 ADFVHVYDVKSGYE----KEQEIDF--FGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 382 dg~i~iwd~~~~~~----~~~~~~~--~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
||.|++||+.+++. ...+..| ...|.+++|+|++++|++++.|+.+..|
T Consensus 308 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw 362 (366)
T 3k26_A 308 VGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASIWRW 362 (366)
T ss_dssp TSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred CCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEEEEE
Confidence 99999999998753 3356666 6899999999999999999999987665
No 34
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-33 Score=261.81 Aligned_cols=233 Identities=15% Similarity=0.183 Sum_probs=205.3
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ++++|++|+.||.|++|++..... ...+..|...|.++.+ +|++. +|++++.|+.|++||+.+++
T Consensus 25 ~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~---~~~~~~h~~~v~~~~~--~~~~~-~l~s~~~d~~i~vwd~~~~~ 98 (312)
T 4ery_A 25 AVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF---EKTISGHKLGISDVAW--SSDSN-LLVSASDDKTLKIWDVSSGK 98 (312)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTTCCE---EEEECCCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETTTCC
T ss_pred cEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc---chhhccCCCceEEEEE--cCCCC-EEEEECCCCEEEEEECCCCc
Confidence 5899998 889999999999999999977653 3556688888998887 99987 69999999999999999999
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
++..+. |...|.+++|+|++++|++++.|+.|++||+++++.+..+..|..+|.+++|+|++++|++|+.|+.|++||+
T Consensus 99 ~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~ 178 (312)
T 4ery_A 99 CLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDT 178 (312)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Confidence 988887 8889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcceEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeE---EEEEcCCCCcEEEEEe
Q 013282 348 RNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS---GISFSPDTESLFIGVW 423 (446)
Q Consensus 348 ~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~---~~~~spdg~~l~~~~~ 423 (446)
+. ++.+..+ ..+..++..++|+|++++|++++.|+.|++||+++++.+..+.+|...+. .....+++.+|++|+.
T Consensus 179 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~ 257 (312)
T 4ery_A 179 AS-GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSE 257 (312)
T ss_dssp TT-CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCT
T ss_pred CC-CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECC
Confidence 76 5555555 45667899999999999999999999999999999998888888775433 2333467889999999
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|+.+..|
T Consensus 258 dg~i~vw 264 (312)
T 4ery_A 258 DNLVYIW 264 (312)
T ss_dssp TSCEEEE
T ss_pred CCEEEEE
Confidence 9887654
No 35
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.6e-34 Score=278.56 Aligned_cols=234 Identities=21% Similarity=0.291 Sum_probs=204.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ++++|++|+.||+|+||++.+... ...+..|...|.++.| +|++. +|++|+.|+.|++|++.+..
T Consensus 68 ~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~---~~~~~~h~~~v~~~~~--s~~g~-~las~~~d~~v~iw~~~~~~ 141 (380)
T 3iz6_a 68 KVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK---THAIKLHCPWVMECAF--APNGQ-SVACGGLDSACSIFNLSSQA 141 (380)
T ss_dssp CEEEEEECTTSSCEEEEETTSEEEEEETTTTEE---EEEEECCCTTCCCCEE--CTTSS-EEEECCSSSCCEEEECCCCS
T ss_pred EEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc---ceEEecCCCCEEEEEE--CCCCC-EEEEeeCCCcEEEEECCCCc
Confidence 5999998 889999999999999999987643 4556678888999888 99998 69999999999999986532
Q ss_pred -------eeEeee-CCCCeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEe-----cCCCCceeEEEECC-CCCEE
Q 013282 269 -------LSKHFR-FPWPVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASL-----CGHLDFSFASAWHP-NGVTF 333 (446)
Q Consensus 269 -------~~~~~~-~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~p-~~~~l 333 (446)
....+. |...|.++.|+|+ +..|++|+.|++|++||+++++.+..+ .+|...|.+++|+| ++++|
T Consensus 142 ~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l 221 (380)
T 3iz6_a 142 DRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMF 221 (380)
T ss_dssp SCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEE
T ss_pred cccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEE
Confidence 223343 8888999999996 557999999999999999999998887 57999999999988 88999
Q ss_pred EEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc-------cCe
Q 013282 334 ATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF-------GEI 406 (446)
Q Consensus 334 ~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~-------~~v 406 (446)
++|+.|++|++||++....++..+.+|.+.|++++|+|+|++|++|+.|+.|++||++++..+..+..+. ..|
T Consensus 222 ~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v 301 (380)
T 3iz6_a 222 ISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIV 301 (380)
T ss_dssp EEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSC
T ss_pred EEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCce
Confidence 9999999999999986678889999999999999999999999999999999999999998877665433 248
Q ss_pred EEEEEcCCCCcEEEEEecCCcceE
Q 013282 407 SGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 407 ~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.+++|+|+|++|++|+.|+.+..|
T Consensus 302 ~~~~~s~~g~~l~~g~~dg~i~vw 325 (380)
T 3iz6_a 302 TSVAFSISGRLLFAGYSNGDCYVW 325 (380)
T ss_dssp SEEEECSSSSEEEEECTTSCEEEE
T ss_pred EEEEECCCCCEEEEEECCCCEEEE
Confidence 999999999999999999887655
No 36
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.1e-33 Score=283.11 Aligned_cols=255 Identities=20% Similarity=0.330 Sum_probs=218.7
Q ss_pred EEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCee
Q 013282 145 VYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS 222 (446)
Q Consensus 145 v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~ 222 (446)
+....++.+++|+.. ++ ....+.+|.. .|.++++ ++++|++++.||.|++|++....
T Consensus 278 ~~~~~d~~i~~w~~~-~~--~~~~~~~h~~----------------~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~-- 336 (577)
T 2ymu_A 278 ASASDDKTVKLWNRN-GQ--LLQTLTGHSS----------------SVWGVAFSPDGQTIASASDDKTVKLWNRNGQH-- 336 (577)
T ss_dssp EEEETTSCEEEEETT-SC--EEEEECCCSS----------------CEEEEEECTTSSEEEEEETTSCEEEEETTSCE--
T ss_pred EEEeCCCEEEEEeCC-Cc--EEEEEecCCC----------------CeEEEEECCCCCEEEEEeCCCeEEEEeCCCCe--
Confidence 344557788999853 32 2223344322 5888888 88999999999999999986542
Q ss_pred eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEE
Q 013282 223 FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGL 301 (446)
Q Consensus 223 ~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~ 301 (446)
......|...+.++.+ +|++. +|++++.|+.|++|+. +++.+..+. |..+|.+++|+|++++|++++.|+.|+
T Consensus 337 --~~~~~~~~~~v~~~~~--s~~g~-~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~ 410 (577)
T 2ymu_A 337 --LQTLTGHSSSVWGVAF--SPDGQ-TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVK 410 (577)
T ss_dssp --EEEECCCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEE
T ss_pred --eEEEeCCCCCEEEEEE--CCCCC-EEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEE
Confidence 3445678888888887 99998 6999999999999996 456666666 889999999999999999999999999
Q ss_pred EEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeC
Q 013282 302 LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 302 i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~ 381 (446)
+||. +++.+..+.+|...|.+++|+|++++|++++.|++|++||+ + ++.+..+.+|...|++++|+|+|++|++++.
T Consensus 411 ~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~-~~~~~~~~~~~~~v~~~~~spd~~~las~~~ 487 (577)
T 2ymu_A 411 LWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-N-GQLLQTLTGHSSSVRGVAFSPDGQTIASASD 487 (577)
T ss_dssp EECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-T-SCEEEEEECCSSCEEEEEECTTSCEEEEEET
T ss_pred EEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-C-CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeC
Confidence 9995 67888999999999999999999999999999999999997 3 6788899999999999999999999999999
Q ss_pred CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 382 ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 382 dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
|+.|++||. +++.+..+.+|...|++++|+|+|++|++++.|+.+..|
T Consensus 488 d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 488 DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred CCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 999999995 677888999999999999999999999999999987654
No 37
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=8.6e-34 Score=269.84 Aligned_cols=290 Identities=13% Similarity=0.096 Sum_probs=229.9
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
.++.+...+.++.+++....++.+.+.. ..++.|.+|+..+++....... +| ...|.++
T Consensus 13 ~~~~h~~~v~~~~~~p~~~~l~~~~s~~----~~d~~v~iw~~~~~~~~~~~~~-~~----------------~~~v~~~ 71 (357)
T 3i2n_A 13 IQKGFNYTVFDCKWVPCSAKFVTMGNFA----RGTGVIQLYEIQHGDLKLLREI-EK----------------AKPIKCG 71 (357)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEEEC------CCCEEEEEEEECSSSEEEEEEE-EE----------------SSCEEEE
T ss_pred hccCCCCceEEEEEcCCCceEEEecCcc----CCCcEEEEEeCCCCcccceeee-cc----------------cCcEEEE
Confidence 3455677888888887665554333210 0267889999988765443332 11 1169999
Q ss_pred Ee--C---CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEE----eCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 196 AV--K---DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIY----GSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 196 ~~--~---~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~----~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
+| + +++|++|+.||.|++|++...... ...+..|...|.++.+. |+|++. +|++++.||.|++||+.+
T Consensus 72 ~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~s~~~~-~l~~~~~d~~i~vwd~~~ 148 (357)
T 3i2n_A 72 TFGATSLQQRYLATGDFGGNLHIWNLEAPEMP--VYSVKGHKEIINAIDGIGGLGIGEGAP-EIVTGSRDGTVKVWDPRQ 148 (357)
T ss_dssp ECTTCCTTTCCEEEEETTSCEEEECTTSCSSC--SEEECCCSSCEEEEEEESGGGCC-CCC-EEEEEETTSCEEEECTTS
T ss_pred EEcCCCCCCceEEEecCCCeEEEEeCCCCCcc--EEEEEecccceEEEeeccccccCCCcc-EEEEEeCCCeEEEEeCCC
Confidence 99 4 699999999999999999877522 24556888999999763 478887 699999999999999998
Q ss_pred ce-eeEeee-C----CCCeeEEE----ECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECC---CCCEE
Q 013282 267 YQ-LSKHFR-F----PWPVNHSS----QSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP---NGVTF 333 (446)
Q Consensus 267 ~~-~~~~~~-~----~~~v~~~~----~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p---~~~~l 333 (446)
++ ++..+. + ...+.+++ |+|++++|++++.++.|++||+++++.... ..|...|.+++|+| ++.+|
T Consensus 149 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l 227 (357)
T 3i2n_A 149 KDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKL 227 (357)
T ss_dssp CSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEE
T ss_pred CCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEE
Confidence 76 666665 2 33788888 789999999999999999999999987544 56889999999999 99999
Q ss_pred EEEeCCCcEEEEEccCCCcceEEEe-----cCCCceEEEEEccCCC-EEEEEeCCCeEEEEEcCCC--------------
Q 013282 334 ATGNQDKTCRIWDLRNLSESVAVLK-----GNLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKSG-------------- 393 (446)
Q Consensus 334 ~sgs~d~~v~iwd~~~~~~~~~~~~-----~~~~~v~~l~~s~dg~-~l~~~~~dg~i~iwd~~~~-------------- 393 (446)
++|+.||.|++||++. ..++..+. +|...|++++|+|+++ +|++++.||.|++||++++
T Consensus 228 ~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~ 306 (357)
T 3i2n_A 228 VATSLEGKFHVFDMRT-QHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMG 306 (357)
T ss_dssp EEEESTTEEEEEEEEE-EETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCC
T ss_pred EEECCCCeEEEEeCcC-CCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccc
Confidence 9999999999999976 44444443 8999999999999998 8999999999999999854
Q ss_pred -----eeEeEeeccccCeEEEEEcCCCCcEE-EEEecCCcceEE
Q 013282 394 -----YEKEQEIDFFGEISGISFSPDTESLF-IGVWDRTYGSLL 431 (446)
Q Consensus 394 -----~~~~~~~~~~~~v~~~~~spdg~~l~-~~~~D~~~~~~l 431 (446)
..+..+..|.+.|.+++|+|+|++|+ +++.|+.+..|-
T Consensus 307 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~ 350 (357)
T 3i2n_A 307 VAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLI 350 (357)
T ss_dssp CCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred cccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEE
Confidence 35667778999999999999999998 789998887663
No 38
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.9e-35 Score=283.65 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=236.4
Q ss_pred cccceeeccceeeeE-EecccC--eEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--
Q 013282 123 SVKSTILHFQLRNLV-WATSKH--DVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-- 197 (446)
Q Consensus 123 ~v~~~~~h~~~~~l~-~~~~~~--~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~-- 197 (446)
.+.++.++++.+.++ .+...+ .+.+..++.|.+|+..++.....+...+ +...|.+++|
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~----------------~~~~v~~~~~s~ 77 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQ----------------VDSKFNDLDWSH 77 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCC----------------CSSCEEEEEECS
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEe----------------cCCceEEEEECC
Confidence 567777787766343 332221 2222457889999987764321111111 1226899998
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCe-eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce------ee
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGV-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ------LS 270 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~-~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~------~~ 270 (446)
++++|++|+.||.|++|++..... ......+..|...|.++.+ +|++..+|++++.|+.|++||+.+++ ..
T Consensus 78 ~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 155 (416)
T 2pm9_A 78 NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKF--NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP 155 (416)
T ss_dssp SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEE--CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC
T ss_pred CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEE--cCCCCCEEEEEcCCCeEEEEECCCCccccccccc
Confidence 889999999999999999987221 1234666788899999988 89844479999999999999998876 33
Q ss_pred Eee----eCCCCeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEecCC------CCceeEEEECCCC-CEEEEEeC
Q 013282 271 KHF----RFPWPVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGH------LDFSFASAWHPNG-VTFATGNQ 338 (446)
Q Consensus 271 ~~~----~~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~------~~~v~~~~~~p~~-~~l~sgs~ 338 (446)
..+ .|...|.+++|+|+ +.+|++++.++.|++||+++++.+..+..+ ...|.+++|+|++ .+|++++.
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 332 37889999999998 789999999999999999999999988876 7899999999987 69999999
Q ss_pred CC---cEEEEEccCCCcceEEEe-cCCCceEEEEEcc-CCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcC
Q 013282 339 DK---TCRIWDLRNLSESVAVLK-GNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSP 413 (446)
Q Consensus 339 d~---~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~s~-dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 413 (446)
|+ .|++||++....++..+. +|...|++++|+| ++++|++++.|+.|++||+.+++.+..+..|.+.|.+++|+|
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~ 315 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAP 315 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECT
T ss_pred CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECC
Confidence 98 999999987557788888 8999999999999 999999999999999999999999999999999999999999
Q ss_pred CC-CcEEEEEecCCcceEE
Q 013282 414 DT-ESLFIGVWDRTYGSLL 431 (446)
Q Consensus 414 dg-~~l~~~~~D~~~~~~l 431 (446)
++ .+|++++.|+.+..|-
T Consensus 316 ~~~~~l~s~~~d~~i~iw~ 334 (416)
T 2pm9_A 316 EAPDLFACASFDNKIEVQT 334 (416)
T ss_dssp TCTTEEEECCSSSEEEEEE
T ss_pred CCCCEEEEEecCCcEEEEE
Confidence 99 8999999999877653
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=6.9e-35 Score=273.88 Aligned_cols=238 Identities=13% Similarity=0.092 Sum_probs=200.5
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|.+++| ++++||+|+.||+|+||++.+... .+...+.+|...|.++.| +|. +. +|++|+.|++|++||+.+
T Consensus 15 ~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-~~~~~l~gH~~~V~~v~~--~~~~~~~-~l~s~s~D~~v~iWd~~~ 90 (316)
T 3bg1_A 15 MIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-ILIADLRGHEGPVWQVAW--AHPMYGN-ILASCSYDRKVIIWREEN 90 (316)
T ss_dssp CEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-EEEEEEECCSSCEEEEEE--CCGGGSS-CEEEEETTSCEEEECCSS
T ss_pred eEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-EEEEEEcCCCccEEEEEe--CCCCCCC-EEEEEECCCEEEEEECCC
Confidence 6999998 899999999999999999976542 234566789999999988 653 55 799999999999999988
Q ss_pred ce--eeEeee-CCCCeeEEEECCC--CCEEEEEecCCcEEEEECCCCce---EEEecCCCCceeEEEECCC---------
Q 013282 267 YQ--LSKHFR-FPWPVNHSSQSPD--GKLLIIVGDNPDGLLVDSMTGKT---IASLCGHLDFSFASAWHPN--------- 329 (446)
Q Consensus 267 ~~--~~~~~~-~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~p~--------- 329 (446)
++ ....+. |...|++++|+|+ +.+|++|+.|+.|++||++++.. ...+.+|...|.+++|+|+
T Consensus 91 ~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~ 170 (316)
T 3bg1_A 91 GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDH 170 (316)
T ss_dssp SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------
T ss_pred CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCcccccc
Confidence 64 444554 8889999999997 78999999999999999987632 3456689999999999997
Q ss_pred --------CCEEEEEeCCCcEEEEEccCCC--cceEEEecCCCceEEEEEccCC----CEEEEEeCCCeEEEEEcCCC--
Q 013282 330 --------GVTFATGNQDKTCRIWDLRNLS--ESVAVLKGNLGAIRSIRYTSDG----RYMATAEPADFVHVYDVKSG-- 393 (446)
Q Consensus 330 --------~~~l~sgs~d~~v~iwd~~~~~--~~~~~~~~~~~~v~~l~~s~dg----~~l~~~~~dg~i~iwd~~~~-- 393 (446)
+++|++|+.|++|++||++... .++..+.+|...|++++|+|++ ++|++|+.|+.|+||++.+.
T Consensus 171 ~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~ 250 (316)
T 3bg1_A 171 PSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASS 250 (316)
T ss_dssp CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTC
T ss_pred ccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccc
Confidence 4789999999999999996432 3667788999999999999987 89999999999999998763
Q ss_pred -e-eEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEEE
Q 013282 394 -Y-EKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLE 432 (446)
Q Consensus 394 -~-~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l~ 432 (446)
. ....+..|...|.+++|+|+|++|++++.|+++..|-.
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~ 291 (316)
T 3bg1_A 251 NTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKE 291 (316)
T ss_dssp CCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEE
T ss_pred cchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEE
Confidence 1 22345568899999999999999999999999877643
No 40
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.7e-32 Score=259.14 Aligned_cols=285 Identities=15% Similarity=0.213 Sum_probs=228.5
Q ss_pred eeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc---eEEEecCCCCCCCCCCCCCccccCccce
Q 013282 115 YEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR---SQVLNVSGHVAPSEKHPGSLLEGFTQTQ 191 (446)
Q Consensus 115 ~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~---~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 191 (446)
.++++|...|.+..++++...++ +....|++|++|+..+... .....+.||.. .
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l-------~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~----------------~ 88 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMI-------LSASRDKTIIMWKLTRDETNYGIPQRALRGHSH----------------F 88 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEE-------EEEETTSCEEEEEECCSSSCSEEEEEEECCCSS----------------C
T ss_pred EEECCccCCEEEEEEeCCCCCEE-------EEEcCCCeEEEEECCCCCcccceeeEEEeCCCC----------------C
Confidence 35778888898888887643332 2234578899999876643 23334455432 5
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
|.+++| ++++|++|+.||.|++|+....... .....+...+..+.+ ++.+. .|++++.|+.+++||+.....
T Consensus 89 V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~--~~~~~-~l~s~s~d~~~~~~d~~~~~~ 162 (340)
T 4aow_A 89 VSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT---RRFVGHTKDVLSVAF--SSDNR-QIVSGSRDKTIKLWNTLGVCK 162 (340)
T ss_dssp EEEEEECTTSSEEEEEETTSEEEEEETTTTEEE---EEEECCSSCEEEEEE--CTTSS-CEEEEETTSCEEEECTTSCEE
T ss_pred EEEEEECCCCCEEEEEcccccceEEeeccccee---eeecCCCCceeEEEE--eecCc-cceeecCCCeEEEEEeCCCce
Confidence 889888 8999999999999999999776433 334455555666655 88877 699999999999999976654
Q ss_pred eEeee--CCCCeeEEEECCCC--CEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 270 SKHFR--FPWPVNHSSQSPDG--KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 270 ~~~~~--~~~~v~~~~~sp~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
..... +...+.+++|++++ .++++++.|+.|++||+++++.+..+.+|.+.|.+++|+|++++|++|+.|++|++|
T Consensus 163 ~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iw 242 (340)
T 4aow_A 163 YTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLW 242 (340)
T ss_dssp EEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred EEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 43332 78889999998854 577899999999999999999999999999999999999999999999999999999
Q ss_pred EccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEee---------ccccCeEEEEEcCCCC
Q 013282 346 DLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI---------DFFGEISGISFSPDTE 416 (446)
Q Consensus 346 d~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~---------~~~~~v~~~~~spdg~ 416 (446)
|++. .+++..+..+ ..|.+++|+|++.+++ ++.|+.|++||++++..+..+. .|...|++++|+|+|+
T Consensus 243 d~~~-~~~~~~~~~~-~~v~~~~~~~~~~~~~-~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~ 319 (340)
T 4aow_A 243 DLNE-GKHLYTLDGG-DIINALCFSPNRYWLC-AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ 319 (340)
T ss_dssp ETTT-TEEEEEEECS-SCEEEEEECSSSSEEE-EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS
T ss_pred Eecc-CceeeeecCC-ceEEeeecCCCCceee-ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC
Confidence 9976 6777777754 5799999999987654 5669999999999887655443 5778999999999999
Q ss_pred cEEEEEecCCcceEE
Q 013282 417 SLFIGVWDRTYGSLL 431 (446)
Q Consensus 417 ~l~~~~~D~~~~~~l 431 (446)
+|++|+.|+.+..|-
T Consensus 320 ~l~sgs~Dg~v~iW~ 334 (340)
T 4aow_A 320 TLFAGYTDNLVRVWQ 334 (340)
T ss_dssp EEEEEETTSCEEEEE
T ss_pred EEEEEeCCCEEEEEe
Confidence 999999999988763
No 41
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.6e-33 Score=270.02 Aligned_cols=289 Identities=12% Similarity=0.028 Sum_probs=219.6
Q ss_pred cccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCce--------EEEecCCCCCCCCCCCCCccccCccceEEE
Q 013282 123 SVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRS--------QVLNVSGHVAPSEKHPGSLLEGFTQTQVST 194 (446)
Q Consensus 123 ~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~--------~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~ 194 (446)
+|.++.++++.+.|+.+.+...- ..-++.|.+|+....... ..+.+.++- ..|.+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~-sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~----------------~~v~s 78 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGN-NGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDND----------------DSPTA 78 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSS-SSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTS----------------CCCCE
T ss_pred CEEEEEEeCCCcEEEEECCCccc-cCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCC----------------CceEE
Confidence 67788888877766655322100 011446899987655421 112233221 14778
Q ss_pred EEeCCcEEEEec-----------cCCcEEEEEcCCCCeeeEEE-Ee-----ecCCCceeeEEEEeCCCCCeEE-EEEeCC
Q 013282 195 LAVKDKLLVAGG-----------FQGELICKHLDRPGVSFCSR-TT-----YDDNAITNAVEIYGSPSGAVHF-TASNND 256 (446)
Q Consensus 195 l~~~~~~l~tg~-----------~dg~i~vw~~~~~~~~~~~~-~~-----~~~~~~v~~i~~~~s~~~~~~l-~s~s~d 256 (446)
++++++.+++|. .|+.+++|++.......... .. ..+...+.+++| +|+|+.++ ++++.|
T Consensus 79 ~~~~~~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~f--SpDg~~la~as~~~d 156 (365)
T 4h5i_A 79 IDASKGIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYI--SREGTVAAIASSKVP 156 (365)
T ss_dssp EEEETTEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEE--CTTSSCEEEEESCSS
T ss_pred EEeCCCEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEE--cCCCCEEEEEECCCC
Confidence 888888888764 47789999987654322111 11 122344667776 99998543 345579
Q ss_pred CcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE--ecCCCCceeEEEECCCCCEEE
Q 013282 257 CGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 257 g~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~ 334 (446)
++|+|||+.+++++..+.+...|.+++|+|+|+++++++.+ .+.+|+..+++.+.. ..+|...|.+++|+|++++++
T Consensus 157 ~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~ 235 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLI 235 (365)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEE
T ss_pred CEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEE
Confidence 99999999999999999998999999999999999998855 577788777776543 346888999999999999999
Q ss_pred EEeCCC----cEEEEEccCCCc---ceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEe-eccccCe
Q 013282 335 TGNQDK----TCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE-IDFFGEI 406 (446)
Q Consensus 335 sgs~d~----~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~-~~~~~~v 406 (446)
+++.|+ ++++|++..... ....+.+|..+|++++|+|+|++||+|+.|+.|+|||+.+++++..+ .+|.+.|
T Consensus 236 ~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 236 AASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred EEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 999887 688999865322 23567789999999999999999999999999999999999988875 5799999
Q ss_pred EEEEEcCCCCcEEEEEecCCcceEE
Q 013282 407 SGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 407 ~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
++++|+|||++|++|+.|++++.|-
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~ 340 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIK 340 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEE
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEE
Confidence 9999999999999999999998763
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.8e-33 Score=268.02 Aligned_cols=281 Identities=13% Similarity=0.093 Sum_probs=228.8
Q ss_pred ccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--
Q 013282 120 NSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-- 197 (446)
Q Consensus 120 ~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~-- 197 (446)
+...+.++.++++.+.++.+. .++.|.+|+..+++...+..+.+|.. .|.++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~--------~d~~v~i~~~~~~~~~~~~~~~~h~~----------------~v~~~~~~~ 62 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICP--------NNHEVHIYEKSGNKWVQVHELKEHNG----------------QVTGVDWAP 62 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEEC--------SSSEEEEEEEETTEEEEEEEEECCSS----------------CEEEEEEET
T ss_pred cCCCeEEEEECCCCCEEEEEe--------CCCEEEEEeCCCCcEEeeeeecCCCC----------------cccEEEEeC
Confidence 455777777777655544433 46778999987775334445554422 5888888
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee---eEeee
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL---SKHFR 274 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~---~~~~~ 274 (446)
++++|++|+.||.|++|++....... ......|...+.++.+ +|++. +|++++.|+.|++||+..++. ...+.
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~-~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~ 138 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKP-TLVILRINRAARCVRW--APNEK-KFAVGSGSRVISICYFEQENDWWVCKHIK 138 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEE-EEECCCCSSCEEEEEE--CTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeee-eEEeecCCCceeEEEE--CCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeee
Confidence 89999999999999999997664332 2334567888888887 89987 699999999999999987652 33332
Q ss_pred --CCCCeeEEEECCCCCEEEEEecCCcEEEEEC------------------CCCceEEEecCCCCceeEEEECCCCCEEE
Q 013282 275 --FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDS------------------MTGKTIASLCGHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 275 --~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~------------------~~~~~~~~~~~~~~~v~~~~~~p~~~~l~ 334 (446)
|...|.+++|+|++++|++++.++.|++||+ .+++.+..+.+|...|.+++|+|++++|+
T Consensus 139 ~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 218 (372)
T 1k8k_C 139 KPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVA 218 (372)
T ss_dssp TTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEE
T ss_pred cccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEE
Confidence 6889999999999999999999999999995 46788899999999999999999999999
Q ss_pred EEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCC--Cee-----------------
Q 013282 335 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS--GYE----------------- 395 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~--~~~----------------- 395 (446)
+++.|+.|++||++. ++++..+..|..+|.+++|+|++++|++| .|+.|++|++.+ +..
T Consensus 219 ~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (372)
T 1k8k_C 219 WVSHDSTVCLADADK-KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGL 296 (372)
T ss_dssp EEETTTEEEEEEGGG-TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------
T ss_pred EEeCCCEEEEEECCC-CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhc
Confidence 999999999999976 78889999999999999999999988887 899999999987 421
Q ss_pred ---------------E------eEe-eccccCeEEEEEc-CCC---CcEEEEEecCCcceE
Q 013282 396 ---------------K------EQE-IDFFGEISGISFS-PDT---ESLFIGVWDRTYGSL 430 (446)
Q Consensus 396 ---------------~------~~~-~~~~~~v~~~~~s-pdg---~~l~~~~~D~~~~~~ 430 (446)
. ..+ .+|.+.|++++|. ++| .+|++|+.|+.+..|
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W 357 (372)
T 1k8k_C 297 TARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIW 357 (372)
T ss_dssp CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEE
T ss_pred chhhhhhhcccccccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEE
Confidence 0 223 3789999999966 676 999999999988766
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=2.1e-33 Score=270.70 Aligned_cols=283 Identities=15% Similarity=0.096 Sum_probs=220.5
Q ss_pred eeeeeeccccccceeeccce-eeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 114 YYEFRRNSRSVKSTILHFQL-RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 114 ~~~f~~~~~~v~~~~~h~~~-~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
+..+..+...+.+..+++.. +.++ ....++.|.+|+..+++....+...+|.. .|
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~--------s~~~dg~i~iwd~~~~~~~~~~~~~~h~~----------------~v 121 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVA--------VGSKGGDIILWDYDVQNKTSFIQGMGPGD----------------AI 121 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEE--------EEEBTSCEEEEETTSTTCEEEECCCSTTC----------------BE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEE--------EEcCCCeEEEEeCCCcccceeeecCCcCC----------------ce
Confidence 44556666677777777654 3332 23446788999998887666665544422 58
Q ss_pred EEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 193 STLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 193 ~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
.+++| ++++|++|+.||.|++|++... ..........+...+.++.+ +|++. +|++++.|+.|++||+ +++.
T Consensus 122 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~d~~i~i~d~-~~~~ 196 (383)
T 3ei3_B 122 TGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVDV--SVSRQ-MLATGDSTGRLLLLGL-DGHE 196 (383)
T ss_dssp EEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEEE--ETTTT-EEEEEETTSEEEEEET-TSCE
T ss_pred eEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEEE--CCCCC-EEEEECCCCCEEEEEC-CCCE
Confidence 89988 4589999999999999999853 22222222334467888877 89988 6999999999999999 4666
Q ss_pred eEeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCC----CceEEEecCCCCceeEEEECC-CCCEEEEEeCCCcE
Q 013282 270 SKHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMT----GKTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTC 342 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v 342 (446)
+..+. |...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+ +|...|.+++|+| ++++|++++.|++|
T Consensus 197 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i 275 (383)
T 3ei3_B 197 IFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEI 275 (383)
T ss_dssp EEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEE
T ss_pred EEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcE
Confidence 66666 899999999999999 999999999999999987 6666666 6999999999999 99999999999999
Q ss_pred EEEEccCCCcceEEEecCC-----------------CceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec--cc
Q 013282 343 RIWDLRNLSESVAVLKGNL-----------------GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID--FF 403 (446)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~~-----------------~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~--~~ 403 (446)
++||+++ ......+.+|. +.+..++|+|+|++ +|+.|+.|++||+.+++.+..+.. |.
T Consensus 276 ~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~ 352 (383)
T 3ei3_B 276 RVYSSYD-WSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAA 352 (383)
T ss_dssp EEEETTB-TTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBC
T ss_pred EEEECCC-CccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCC
Confidence 9999976 55555555442 23344666666665 667899999999999998888876 45
Q ss_pred cCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 404 GEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 404 ~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+.+..++|+|+|++|++|+ |+.+..|
T Consensus 353 ~~~~~~~~s~~g~~l~s~s-d~~i~iw 378 (383)
T 3ei3_B 353 GIISLNKFSPTGDVLASGM-GFNILIW 378 (383)
T ss_dssp SCCCEEEECTTSSEEEEEE-TTEEEEE
T ss_pred ceEEEEEEecCccEEEEec-CCcEEEE
Confidence 7788889999999999996 8776654
No 44
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.5e-32 Score=268.32 Aligned_cols=272 Identities=15% Similarity=0.209 Sum_probs=228.6
Q ss_pred eeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcE
Q 013282 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGEL 211 (446)
Q Consensus 134 ~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i 211 (446)
..+-|+. .+.|....+++|++|+..+++...++.+.+|-. .|++++| +|++||+|+.||+|
T Consensus 109 ~~l~wS~-~n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~----------------~V~sv~fspdg~~lasgs~Dg~v 171 (420)
T 4gga_A 109 NLVDWSS-GNVLAVALDNSVYLWSASSGDILQLLQMEQPGE----------------YISSVAWIKEGNYLAVGTSSAEV 171 (420)
T ss_dssp BCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCSTTC----------------CEEEEEECTTSSEEEEEETTSCE
T ss_pred eeEEECC-CCEEEEEeCCEEEEEECCCCCEEEEEEecCCCC----------------cEEEEEECCCCCEEEEEECCCeE
Confidence 3455775 457777779999999999998877777765432 5999999 89999999999999
Q ss_pred EEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-eeeEeee-CCCCeeEEEECCCCC
Q 013282 212 ICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSKHFR-FPWPVNHSSQSPDGK 289 (446)
Q Consensus 212 ~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-~~~~~~~-~~~~v~~~~~sp~~~ 289 (446)
+||++.+... .....+|...+.++.+ ++. +|++|+.|+.+++||.... ..+..+. |...+..+.++|+++
T Consensus 172 ~iWd~~~~~~---~~~~~~h~~~v~~~s~----~~~-~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~ 243 (420)
T 4gga_A 172 QLWDVQQQKR---LRNMTSHSARVGSLSW----NSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGR 243 (420)
T ss_dssp EEEETTTTEE---EEEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS
T ss_pred EEEEcCCCcE---EEEEeCCCCceEEEee----CCC-EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCC
Confidence 9999987743 4566788888887755 344 7999999999999998764 3445555 889999999999999
Q ss_pred EEEEEecCCcEEEEECCCCc----eEEEecCCCCceeEEEECCCC-CEEEE--EeCCCcEEEEEccCCCcceEEEecCCC
Q 013282 290 LLIIVGDNPDGLLVDSMTGK----TIASLCGHLDFSFASAWHPNG-VTFAT--GNQDKTCRIWDLRNLSESVAVLKGNLG 362 (446)
Q Consensus 290 ~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~p~~-~~l~s--gs~d~~v~iwd~~~~~~~~~~~~~~~~ 362 (446)
++++++.|+.+++|+..+++ .+.....|...|.+++|+|.+ .++++ |+.|++|++||+++ +.++..+..| .
T Consensus 244 ~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t-~~~~~~~~~~-~ 321 (420)
T 4gga_A 244 HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSAVDAH-S 321 (420)
T ss_dssp EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTT-TEEEEEEECS-S
T ss_pred eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCc-cccceeeccc-c
Confidence 99999999999999998765 355677899999999999954 56655 45799999999976 7777777765 5
Q ss_pred ceEEEEEccCCCEEEEEe--CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEEE
Q 013282 363 AIRSIRYTSDGRYMATAE--PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLLE 432 (446)
Q Consensus 363 ~v~~l~~s~dg~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l~ 432 (446)
.+.++.|+|+++.|++++ .|+.|+|||+.+++++..+.+|.+.|.+++|+|+|++|++|+.|++++.|-.
T Consensus 322 ~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 322 QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRC 393 (420)
T ss_dssp CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECC
T ss_pred ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEEC
Confidence 688999999999988776 6899999999999999999999999999999999999999999999988743
No 45
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=267.63 Aligned_cols=292 Identities=16% Similarity=0.117 Sum_probs=230.8
Q ss_pred eeeeccccccceeecccee-eeEEecccCeEEEecCCeEEEEec----CCCCce----EEEecCCCCCCCCCCCCCcccc
Q 013282 116 EFRRNSRSVKSTILHFQLR-NLVWATSKHDVYLMSHFSVIHWSS----LTSSRS----QVLNVSGHVAPSEKHPGSLLEG 186 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~-~l~~~~~~~~v~~~~~~~i~~w~~----~~~~~~----~~~~~~g~~~~~~~~~g~~~~~ 186 (446)
....+...+.++.+++..+ .++.+ ..++.|.+|+. .+++.. ....+...... .....
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 105 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYG--------EKNSVARLARIVETDQEGKKYWKLTIIAELRHPFAL------SASSG 105 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEE--------ETBTEEEEEEEEEC------CEEEEEEEEEECCCCC------C----
T ss_pred eeeeccCceEEEEECCCCCcEEEEe--------cCCceEEEEEEecccCCccccccccccccccccccc------ccccc
Confidence 3344456777887777765 34333 34677899998 777520 12222211110 00001
Q ss_pred CccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec
Q 013282 187 FTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (446)
Q Consensus 187 ~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~ 264 (446)
.+...|.+++| ++++|++|+.+|.|++|+. .... ...+..|...|.++.+ +|++. +|++++.|+.|++||+
T Consensus 106 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~---~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 106 KTTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGAL---LNVLNFHRAPIVSVKW--NKDGT-HIISMDVENVTILWNV 178 (425)
T ss_dssp --CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE---EEEECCCCSCEEEEEE--CTTSS-EEEEEETTCCEEEEET
T ss_pred CCCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCe---eeeccCCCccEEEEEE--CCCCC-EEEEEecCCeEEEEEC
Confidence 12236999999 8899999999999999993 3322 3455678888999888 99988 6889999999999999
Q ss_pred CcceeeEeee---------------------------------------------------------CCCCeeEEEECCC
Q 013282 265 GKYQLSKHFR---------------------------------------------------------FPWPVNHSSQSPD 287 (446)
Q Consensus 265 ~~~~~~~~~~---------------------------------------------------------~~~~v~~~~~sp~ 287 (446)
.+++.+..+. |..+|.+++|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 8766544321 4567899999999
Q ss_pred CCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEE
Q 013282 288 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSI 367 (446)
Q Consensus 288 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l 367 (446)
+++|++++.++.|++||+++++.+..+.+|...|.+++|+|++ ++++++.|+.|++||++. .+.+..+..|...|.++
T Consensus 259 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~i~~~ 336 (425)
T 1r5m_A 259 NKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-NTLLALSIVDGVPIFAG 336 (425)
T ss_dssp TTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-TEEEEEEECTTCCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-CcEeEecccCCccEEEE
Confidence 9999999999999999999999999999999999999999999 999999999999999976 78888999999999999
Q ss_pred EEccCCCEEEEEeCCCeEEEEEcCCCe--------------------eEeEeecccc--CeEEEEEcCCCCcEEEEEecC
Q 013282 368 RYTSDGRYMATAEPADFVHVYDVKSGY--------------------EKEQEIDFFG--EISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 368 ~~s~dg~~l~~~~~dg~i~iwd~~~~~--------------------~~~~~~~~~~--~v~~~~~spdg~~l~~~~~D~ 425 (446)
+|+|++++|++++.||.|++||+.++. .+..+..|.. .|.+++|+|++++|++++.|+
T Consensus 337 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 416 (425)
T 1r5m_A 337 RISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQ 416 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSS
T ss_pred EEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCc
Confidence 999999999999999999999999887 7788888866 999999999999999999999
Q ss_pred CcceE
Q 013282 426 TYGSL 430 (446)
Q Consensus 426 ~~~~~ 430 (446)
.+..|
T Consensus 417 ~i~iw 421 (425)
T 1r5m_A 417 EGSVV 421 (425)
T ss_dssp CCEEE
T ss_pred eEEEE
Confidence 88655
No 46
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1e-33 Score=270.44 Aligned_cols=240 Identities=16% Similarity=0.111 Sum_probs=190.7
Q ss_pred eeEEecccCeEEEecCCeEEEEecCCCCceEEE--ecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCc
Q 013282 135 NLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVL--NVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGE 210 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~--~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~ 210 (446)
.+.|.+....+....++.|++|+..+++..... ...+|. ..|.+++| ++++|++|+.||.
T Consensus 99 ~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~----------------~~V~~v~~spdg~~l~sgs~dg~ 162 (357)
T 4g56_B 99 DVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHD----------------DIVKTLSVFSDGTQAVSGGKDFS 162 (357)
T ss_dssp EEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCS----------------SCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCC----------------CCEEEEEECCCCCEEEEEeCCCe
Confidence 344555555666677889999998776533221 122221 26899988 8999999999999
Q ss_pred EEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee---CCCCeeEEEECCC
Q 013282 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR---FPWPVNHSSQSPD 287 (446)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~sp~ 287 (446)
|++|++.+.. +...+..|...|.++.+ ++++..++++++.|++|++||+.++++...+. +...+.+++|+|+
T Consensus 163 v~iwd~~~~~---~~~~~~~h~~~v~~v~~--s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~ 237 (357)
T 4g56_B 163 VKVWDLSQKA---VLKSYNAHSSEVNCVAA--CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPE 237 (357)
T ss_dssp EEEEETTTTE---EEEEECCCSSCEEEEEE--CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTT
T ss_pred EEEEECCCCc---EEEEEcCCCCCEEEEEE--ccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhc
Confidence 9999998764 34566788999999988 88887689999999999999999988776654 5677999999996
Q ss_pred -CCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCC-CEEEEEeCCCcEEEEEccCCCcceEEEecCCCceE
Q 013282 288 -GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIR 365 (446)
Q Consensus 288 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~ 365 (446)
+.+|++|+.++.|++||+++++++..+.+|...|.+++|+|++ ++||+|+.|++|+|||++. ++.+.. .+|.+.|+
T Consensus 238 ~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~-~~~~~~-~~H~~~V~ 315 (357)
T 4g56_B 238 KDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADF-SEVFRD-LSHRDFVT 315 (357)
T ss_dssp STTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTS-CEEEEE-CCCSSCEE
T ss_pred ccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCC-CcEeEE-CCCCCCEE
Confidence 5688999999999999999999999999999999999999987 6899999999999999965 565554 48999999
Q ss_pred EEEEcc-CCCEEEEEeCCCeEEEEEcCCCeeEe
Q 013282 366 SIRYTS-DGRYMATAEPADFVHVYDVKSGYEKE 397 (446)
Q Consensus 366 ~l~~s~-dg~~l~~~~~dg~i~iwd~~~~~~~~ 397 (446)
+|+|+| ++++|++|+.||.|++|++.+.....
T Consensus 316 ~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~ 348 (357)
T 4g56_B 316 GVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTE 348 (357)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECC------
T ss_pred EEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc
Confidence 999998 79999999999999999997654333
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-34 Score=280.63 Aligned_cols=267 Identities=13% Similarity=0.146 Sum_probs=220.8
Q ss_pred EEEecCCeEEEEecCCCC--ceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--C-CcEEEEeccCCcEEEEEcCCC
Q 013282 145 VYLMSHFSVIHWSSLTSS--RSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K-DKLLVAGGFQGELICKHLDRP 219 (446)
Q Consensus 145 v~~~~~~~i~~w~~~~~~--~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~-~~~l~tg~~dg~i~vw~~~~~ 219 (446)
+....++.|.+|+..+.. ......+.+|.. .|.+++| + +++|++|+.||.|++|++...
T Consensus 83 ~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~----------------~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~ 146 (416)
T 2pm9_A 83 AGALDNGSLELYSTNEANNAINSMARFSNHSS----------------SVKTVKFNAKQDNVLASGGNNGEIFIWDMNKC 146 (416)
T ss_dssp EEEESSSCEEEECCSSTTSCCCEEEECCCSSS----------------CCCEEEECSSSTTBEEEECSSSCEEBCBTTTT
T ss_pred EEEccCCeEEEeecccccccccchhhccCCcc----------------ceEEEEEcCCCCCEEEEEcCCCeEEEEECCCC
Confidence 333457889999987621 124444444422 5888888 4 889999999999999999877
Q ss_pred C------eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-C------CCCeeEEEECC
Q 013282 220 G------VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-F------PWPVNHSSQSP 286 (446)
Q Consensus 220 ~------~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~------~~~v~~~~~sp 286 (446)
. ..........|...+.++.+ +|++..+|++++.||.|++||+.+++.+..+. + ...|.+++|+|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 224 (416)
T 2pm9_A 147 TESPSNYTPLTPGQSMSSVDEVISLAW--NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHP 224 (416)
T ss_dssp SSCTTTCCCBCCCCSCCSSCCCCEEEE--CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECS
T ss_pred ccccccccccccccccCCCCCeeEEEe--CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECC
Confidence 5 32222234567788888887 99855589999999999999999999888887 3 68899999999
Q ss_pred CC-CEEEEEecCC---cEEEEECCCC-ceEEEec-CCCCceeEEEECC-CCCEEEEEeCCCcEEEEEccCCCcceEEEec
Q 013282 287 DG-KLLIIVGDNP---DGLLVDSMTG-KTIASLC-GHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKG 359 (446)
Q Consensus 287 ~~-~~l~~~~~d~---~i~i~d~~~~-~~~~~~~-~~~~~v~~~~~~p-~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~ 359 (446)
++ .++++++.++ .|++||++++ +++..+. +|...|.+++|+| ++++|++++.|++|++||++. ++++..+.+
T Consensus 225 ~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~-~~~~~~~~~ 303 (416)
T 2pm9_A 225 KNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPES-AEQLSQFPA 303 (416)
T ss_dssp SCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSS-CCEEEEEEC
T ss_pred CCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCC-CccceeecC
Confidence 87 6899999998 9999999986 6777888 8999999999999 999999999999999999976 788999999
Q ss_pred CCCceEEEEEccCC-CEEEEEeCCCeEEEEEcCCCeeEeEeec-----------------------------------cc
Q 013282 360 NLGAIRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEID-----------------------------------FF 403 (446)
Q Consensus 360 ~~~~v~~l~~s~dg-~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----------------------------------~~ 403 (446)
|...|.+++|+|++ ++|++++.|+.|++|++.++........ |.
T Consensus 304 ~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (416)
T 2pm9_A 304 RGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYG 383 (416)
T ss_dssp SSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTC
T ss_pred CCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCcccc
Confidence 99999999999999 8999999999999999987653322111 55
Q ss_pred cCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 404 GEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 404 ~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.++.+++|+|+|++|++++.|+++..|
T Consensus 384 ~~~~~~~~s~dg~~la~~~~d~~v~~w 410 (416)
T 2pm9_A 384 EPSPAAHWAFGGKLVQITPDGKGVSIT 410 (416)
T ss_dssp CCSCCCEEETTTEEECBCTTSSCBCCB
T ss_pred CCccceEEeeCCeEEEEeCCCCeEEEE
Confidence 677899999999999999999998765
No 48
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.8e-33 Score=268.37 Aligned_cols=231 Identities=18% Similarity=0.234 Sum_probs=196.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC------------------CCceeeEEEEeCCCCCeEE
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD------------------NAITNAVEIYGSPSGAVHF 250 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~------------------~~~v~~i~~~~s~~~~~~l 250 (446)
.|.+++| +|++||+|+ ++.+++|++.++.... .+..+ ...|.+++| +|+|+ +|
T Consensus 66 ~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~---~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~--s~dg~-~l 138 (393)
T 1erj_A 66 VVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVA---RLSDDSAANKDPENLNTSSSPSSDLYIRSVCF--SPDGK-FL 138 (393)
T ss_dssp CCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEE---EECC-----------------CCCCBEEEEEE--CTTSS-EE
T ss_pred EEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEE---EecCccccccccccccccccCCCceeEEEEEE--CCCCC-EE
Confidence 5778888 899999987 6899999998775432 22121 123667766 99998 69
Q ss_pred EEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECC-
Q 013282 251 TASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP- 328 (446)
Q Consensus 251 ~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p- 328 (446)
++|+.|++|++||+.+++.+..+. |...|.+++|+|++++|++++.|++|++||+++++....+. +...+.+++|+|
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~ 217 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPG 217 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECST
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECC
Confidence 999999999999999999988887 89999999999999999999999999999999999888776 567899999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCcceEEE-------ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC--------
Q 013282 329 NGVTFATGNQDKTCRIWDLRNLSESVAVL-------KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-------- 393 (446)
Q Consensus 329 ~~~~l~sgs~d~~v~iwd~~~~~~~~~~~-------~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~-------- 393 (446)
++++|++|+.|++|++||++. +..+..+ .+|...|.+++|+|+|++|++|+.|+.|++||+++.
T Consensus 218 ~~~~l~~~s~d~~v~iwd~~~-~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~ 296 (393)
T 1erj_A 218 DGKYIAAGSLDRAVRVWDSET-GFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKT 296 (393)
T ss_dssp TCCEEEEEETTSCEEEEETTT-CCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-----------
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccC
Confidence 899999999999999999976 5666555 578899999999999999999999999999999763
Q ss_pred ----eeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 394 ----YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 394 ----~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.+...+.+|...|.+++|+|++++|++|+.|+++..|
T Consensus 297 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 297 PNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFW 337 (393)
T ss_dssp ----CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEE
T ss_pred CCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3455677899999999999999999999999877544
No 49
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.4e-33 Score=275.11 Aligned_cols=265 Identities=11% Similarity=0.065 Sum_probs=210.3
Q ss_pred eEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCCeee
Q 013282 144 DVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSF 223 (446)
Q Consensus 144 ~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~ 223 (446)
.+....++.+.+|+..+++....+ .++ ....+..+..++++|++|+.+|.|++|++....
T Consensus 71 l~~~~~d~~v~i~d~~~~~~~~~~--~~~---------------~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~--- 130 (420)
T 3vl1_A 71 LYKARLDGHDFLFNTIIRDGSKML--KRA---------------DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNL--- 130 (420)
T ss_dssp EEEEEETTEEEEEECCSEETTTTS--CSC---------------CEEEEEEECSSSCEEEEEETTSCEEEECTTSCE---
T ss_pred EEEEEcCCcEEEEEecccceeeEE--ecC---------------CceEEEEEecCCCEEEEEECCCCEEEEeCCCcc---
Confidence 344445778899998665322111 110 001122223389999999999999999997653
Q ss_pred EEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEE
Q 013282 224 CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLL 302 (446)
Q Consensus 224 ~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i 302 (446)
+...+..|...|.++.+ +|++. +|++++.|+.|++||+.+++.+..+. |...|.+++|+|++++|++++.|+.|++
T Consensus 131 ~~~~~~~h~~~v~~~~~--~~~~~-~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~i 207 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKF--FPSGE-ALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRL 207 (420)
T ss_dssp EEEETTSSSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred eeeecccccCccEEEEE--CCCCC-EEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 34555688999999988 99988 79999999999999999999888888 8999999999999999999999999999
Q ss_pred EECCCCceEEEecC---CC---------------------CceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEe
Q 013282 303 VDSMTGKTIASLCG---HL---------------------DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK 358 (446)
Q Consensus 303 ~d~~~~~~~~~~~~---~~---------------------~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~ 358 (446)
||+++++.+..+.. |. ..+.+++|+|++++|++|+.||.|++||++..........
T Consensus 208 wd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 287 (420)
T 3vl1_A 208 WECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPS 287 (420)
T ss_dssp EETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred eECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEccc
Confidence 99999999988875 33 3444455689999999999999999999987443444445
Q ss_pred cCCCceEEEEEccCCC-EEEEEeCCCeEEEEEcCCCee-EeEeec-cccCeEEEEEcCCCCcEEEEEecCCcceEEE
Q 013282 359 GNLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKSGYE-KEQEID-FFGEISGISFSPDTESLFIGVWDRTYGSLLE 432 (446)
Q Consensus 359 ~~~~~v~~l~~s~dg~-~l~~~~~dg~i~iwd~~~~~~-~~~~~~-~~~~v~~~~~spdg~~l~~~~~D~~~~~~l~ 432 (446)
.|...|++++|+|+++ +|++|+.||.|++||++++.. +..+.. |...|.++.| |++++|++++.|+++..|-.
T Consensus 288 ~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~ 363 (420)
T 3vl1_A 288 KFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDII 363 (420)
T ss_dssp TTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEE
T ss_pred ccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEec
Confidence 6888999999999998 999999999999999998754 556665 5667777754 57889999999998877653
No 50
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.9e-32 Score=254.40 Aligned_cols=279 Identities=12% Similarity=0.106 Sum_probs=227.9
Q ss_pred ceeeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 113 SYYEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
....++.|...+.+..+ +..+ ..+....++.|++|+..++.....+.. |. ..|
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~--------~l~s~~~dg~v~vw~~~~~~~~~~~~~--~~----------------~~v 62 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDS--------KVASVSRDGTVRLWSKDDQWLGTVVYT--GQ----------------GFL 62 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETT--------EEEEEETTSEEEEEEESSSEEEEEEEE--CS----------------SCE
T ss_pred HHHHhhCCCCCcEEEEe-cCCC--------EEEEEEcCCcEEEEECCCCEEEEEeec--CC----------------ccE
Confidence 34556666667766655 3322 233445577889999876643333322 21 158
Q ss_pred EEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 193 STLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.++++ ++++|++|+.+|.|++|++..............|...+.++.+ ++. ++++++.||.|++|| .++..
T Consensus 63 ~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~----~~~-~l~~~~~d~~i~~~d--~~~~~ 135 (313)
T 3odt_A 63 NSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF----QDG-VVISGSWDKTAKVWK--EGSLV 135 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE----ETT-EEEEEETTSEEEEEE--TTEEE
T ss_pred EEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe----cCC-EEEEEeCCCCEEEEc--CCcEE
Confidence 88888 8999999999999999999876533334556788888988877 344 799999999999999 56666
Q ss_pred Eeee-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEecC-CCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 271 KHFR-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
..+. +..++.++.|+| +++.+++++.++.|++|| .++.+..+.. |...+.+++|+|++. +++++.|+.|++||+
T Consensus 136 ~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~ 212 (313)
T 3odt_A 136 YNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDM 212 (313)
T ss_dssp EEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEET
T ss_pred EecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEEC
Confidence 6666 889999999988 999999999999999999 5667777777 899999999999998 999999999999999
Q ss_pred cCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
+. ++++..+.+|.+.|++++|+|++ .|++++.||.|++||+.+++....+..|...|.+++|+|+++ +++++.|+.+
T Consensus 213 ~~-~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 213 HT-GDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp TT-CCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCE
T ss_pred Cc-hhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcE
Confidence 76 78889999999999999999999 588999999999999999999999999999999999999998 6679999988
Q ss_pred ceEE
Q 013282 428 GSLL 431 (446)
Q Consensus 428 ~~~l 431 (446)
..|-
T Consensus 290 ~iw~ 293 (313)
T 3odt_A 290 RIFS 293 (313)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6653
No 51
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.6e-32 Score=257.33 Aligned_cols=233 Identities=16% Similarity=0.198 Sum_probs=201.8
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEee--cCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTY--DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~--~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|.++++ ++++|++|+ +|.|++|++............. .|...+.++.+ +|++. +|++++.|+.|++||+.+
T Consensus 53 ~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~d~~i~~~d~~~ 128 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKL--LPDGC-TLIVGGEASTLSIWDLAA 128 (337)
T ss_dssp CCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEE--CTTSS-EEEEEESSSEEEEEECCC
T ss_pred ceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEE--cCCCC-EEEEEcCCCcEEEEECCC
Confidence 5778888 889999999 9999999998765332222222 67888888888 99987 689999999999999988
Q ss_pred ce--eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEE
Q 013282 267 YQ--LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 267 ~~--~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
++ ....+. +...|.+++|+|++++|++++.++.|++||+++++.+..+.+|...+.+++|+|++++|++++.|+.|+
T Consensus 129 ~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~ 208 (337)
T 1gxr_A 129 PTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVR 208 (337)
T ss_dssp C--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred CCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEE
Confidence 77 444444 788899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
+||++. .+.+..+. +...+.+++|+|++++|++++.++.|++||+.++.. ..+..|...|.+++|+|++++|++++.
T Consensus 209 ~~d~~~-~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~ 285 (337)
T 1gxr_A 209 SWDLRE-GRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGK 285 (337)
T ss_dssp EEETTT-TEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEECCC-CceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecC
Confidence 999976 66666654 678899999999999999999999999999998764 466789999999999999999999999
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|+.+..|
T Consensus 286 dg~i~~~ 292 (337)
T 1gxr_A 286 DNLLNAW 292 (337)
T ss_dssp TSEEEEE
T ss_pred CCcEEEE
Confidence 9876544
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-33 Score=276.77 Aligned_cols=283 Identities=14% Similarity=0.094 Sum_probs=215.8
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
....+...|++..+||...++++ ....++.|++|+..++.....+.+.||.. .|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~la-------sGs~dg~i~lWd~~~~~~~~~~~~~gH~~----------------~V~~l 170 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVA-------VGSKGGDIMLWNFGIKDKPTFIKGIGAGG----------------SITGL 170 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEE-------EEETTSCEEEECSSCCSCCEEECCCSSSC----------------CCCEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEE-------EEeCCCEEEEEECCCCCceeEEEccCCCC----------------CEEEE
Confidence 34455667888888886544432 23457889999998887777777666543 58888
Q ss_pred Ee---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCC--CceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 196 AV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN--AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 196 ~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~--~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
+| ++++|++|+.||+|++||+..... ......+. ..+.++.+ +|++. +|++|+.||.|++||+.... +
T Consensus 171 ~f~p~~~~~l~s~s~D~~v~iwd~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~-~l~~g~~dg~i~~wd~~~~~-~ 243 (435)
T 4e54_B 171 KFNPLNTNQFYASSMEGTTRLQDFKGNIL---RVFASSDTINIWFCSLDV--SASSR-MVVTGDNVGNVILLNMDGKE-L 243 (435)
T ss_dssp EECSSCTTEEEEECSSSCEEEEETTSCEE---EEEECCSSCSCCCCCEEE--ETTTT-EEEEECSSSBEEEEESSSCB-C
T ss_pred EEeCCCCCEEEEEeCCCEEEEeeccCCce---eEEeccCCCCccEEEEEE--CCCCC-EEEEEeCCCcEeeeccCcce-e
Confidence 88 578999999999999999975422 22222333 33455655 89988 79999999999999997544 4
Q ss_pred Eeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCceEEE---ecCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 271 KHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIAS---LCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
..+. |...|.+++|+|++. +|++|+.|+.|++||+++++.... ..+|...|.+++|+|+|++|++|+.|++|+||
T Consensus 244 ~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iw 323 (435)
T 4e54_B 244 WNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVY 323 (435)
T ss_dssp CCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEE
T ss_pred EEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEE
Confidence 4444 899999999999876 778899999999999987765433 35799999999999999999999999999999
Q ss_pred EccCCCcceEEEecCCC------ceEEEEEccCCCEEEEEeC------------CCeEEEEEcCCCeeEeEee-ccccCe
Q 013282 346 DLRNLSESVAVLKGNLG------AIRSIRYTSDGRYMATAEP------------ADFVHVYDVKSGYEKEQEI-DFFGEI 406 (446)
Q Consensus 346 d~~~~~~~~~~~~~~~~------~v~~l~~s~dg~~l~~~~~------------dg~i~iwd~~~~~~~~~~~-~~~~~v 406 (446)
|++. ......+..|.. .+..+.|+|++.+++++.. ++.|++||+.+++.+..+. .|...|
T Consensus 324 d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v 402 (435)
T 4e54_B 324 SASQ-WDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGI 402 (435)
T ss_dssp ESSS-SSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCC
T ss_pred ECCC-CccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcE
Confidence 9976 566666655542 2335678888877776642 3579999999998887765 577788
Q ss_pred EEE-EEcCCCCcEEEEEecCCcceE
Q 013282 407 SGI-SFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 407 ~~~-~~spdg~~l~~~~~D~~~~~~ 430 (446)
.++ +|+|+|++|++|+ |+++..|
T Consensus 403 ~s~~~fspdg~~lasg~-d~~i~iW 426 (435)
T 4e54_B 403 SSLNEFNPMGDTLASAM-GYHILIW 426 (435)
T ss_dssp CCEEEECTTSSCEEEEC-SSEEEEC
T ss_pred EEEEEECCCCCEEEEEc-CCcEEEE
Confidence 887 6999999998775 7766544
No 53
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.9e-32 Score=261.95 Aligned_cols=264 Identities=15% Similarity=0.146 Sum_probs=221.9
Q ss_pred ccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCC
Q 013282 141 SKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDR 218 (446)
Q Consensus 141 ~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~ 218 (446)
+...+....++.|.+|+..+++....+... | ...|.+++| ++++|++|+.+|.|++|++.+
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~~~~~~-~----------------~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~ 165 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSALAETD-E----------------STYVASVKWSHDGSFLSVGLGNGLVDIYDVES 165 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEEEEECC-T----------------TCCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeEeeecC-C----------------CCCEEEEEECCCCCEEEEECCCCeEEEEECcC
Confidence 345666677899999999888765554432 1 115899999 889999999999999999987
Q ss_pred CCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC-cceeeEeee-CCCCeeEEEECCCCCEEEEEec
Q 013282 219 PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGD 296 (446)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~ 296 (446)
.... ..+..|...|.++.+ + +. +|++++.||.|++||+. ....+..+. |...|.+++|+|++++|++++.
T Consensus 166 ~~~~---~~~~~~~~~v~~~~~--~--~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 166 QTKL---RTMAGHQARVGCLSW--N--RH-VLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp CCEE---EEECCCSSCEEEEEE--E--TT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEET
T ss_pred CeEE---EEecCCCCceEEEEE--C--CC-EEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeC
Confidence 7543 455688888998877 3 34 79999999999999998 455566665 8999999999999999999999
Q ss_pred CCcEEEEECCCCceEEEecCCCCceeEEEECCCC-CEEEEEe--CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCC
Q 013282 297 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG-VTFATGN--QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 373 (446)
Q Consensus 297 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~-~~l~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg 373 (446)
|+.|++||+++++.+..+.+|...|.+++|+|++ .++++|+ .|+.|++||++. ++++..+. +...|++++|+|++
T Consensus 238 d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~-~~~~~~~~-~~~~v~~~~~s~~~ 315 (401)
T 4aez_A 238 DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT-GARVNTVD-AGSQVTSLIWSPHS 315 (401)
T ss_dssp TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT-CCEEEEEE-CSSCEEEEEECSSS
T ss_pred CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC-CCEEEEEe-CCCcEEEEEECCCC
Confidence 9999999999999999999999999999999965 5667765 799999999976 67777775 56789999999999
Q ss_pred CEEEEEe--CCCeEEEEEcCCCeeEe--EeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 374 RYMATAE--PADFVHVYDVKSGYEKE--QEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 374 ~~l~~~~--~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
++|++++ .+|.|++||+.++.... .+.+|.+.|.+++|+|+|++|++++.|+.+..|-
T Consensus 316 ~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 316 KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 9999954 89999999999865443 4668999999999999999999999999887663
No 54
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.3e-34 Score=283.20 Aligned_cols=290 Identities=10% Similarity=-0.053 Sum_probs=215.9
Q ss_pred cccccceeeccce---------eeeEEecccC-----------eEEEecCCeEEEEecCCCCceEE--EecCCCCCCCCC
Q 013282 121 SRSVKSTILHFQL---------RNLVWATSKH-----------DVYLMSHFSVIHWSSLTSSRSQV--LNVSGHVAPSEK 178 (446)
Q Consensus 121 ~~~v~~~~~h~~~---------~~l~~~~~~~-----------~v~~~~~~~i~~w~~~~~~~~~~--~~~~g~~~~~~~ 178 (446)
...|.++.+.+.. ..++.++... .+....++.|.+|+..+++.... ..+.+|.
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~----- 207 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSF----- 207 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECC-----
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecC-----
Confidence 4577777777764 3444443221 12235578899999866653211 1122211
Q ss_pred CCCCccccCccceEEEEEe--C------CcEEEEeccCCcEEEEEcCCCCee--------eEEEEeecCCCceeeEEEEe
Q 013282 179 HPGSLLEGFTQTQVSTLAV--K------DKLLVAGGFQGELICKHLDRPGVS--------FCSRTTYDDNAITNAVEIYG 242 (446)
Q Consensus 179 ~~g~~~~~~~~~~v~~l~~--~------~~~l~tg~~dg~i~vw~~~~~~~~--------~~~~~~~~~~~~v~~i~~~~ 242 (446)
..|.+++| + +++||+|+.||+|++|++...... .....+.+|...|.+++|
T Consensus 208 -----------~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~-- 274 (524)
T 2j04_B 208 -----------GEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDF-- 274 (524)
T ss_dssp -----------CSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEE--
T ss_pred -----------CcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEe--
Confidence 15888888 3 469999999999999999765321 001245678888998888
Q ss_pred CCCCCeEEEEEeCCCcEEEEecCcce-eeEeee-CCCCeeEE--EECCCC-CEEEEEecCCcEEEEECCCCceEEEecCC
Q 013282 243 SPSGAVHFTASNNDCGVRDFDMGKYQ-LSKHFR-FPWPVNHS--SQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASLCGH 317 (446)
Q Consensus 243 s~~~~~~l~s~s~dg~v~iwd~~~~~-~~~~~~-~~~~v~~~--~~sp~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 317 (446)
++++ .|++|+.||+|++||+.++. +...+. |..+|.++ +|+|++ .+|++|+.|++|+|||+++++++..+.+|
T Consensus 275 s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~ 352 (524)
T 2j04_B 275 LSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSR 352 (524)
T ss_dssp SSSS--EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEE
T ss_pred cCCC--eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccc
Confidence 7754 69999999999999998764 444455 89999999 578888 89999999999999999998887777777
Q ss_pred CC--ceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC--
Q 013282 318 LD--FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-- 393 (446)
Q Consensus 318 ~~--~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~-- 393 (446)
.. .|.+++|+|+++.+++++.|++|++||++. ..++..+.+|.+.|++|+|+|+|++|++|+.|++|++||+...
T Consensus 353 ~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~-~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~ 431 (524)
T 2j04_B 353 FRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA-AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLL 431 (524)
T ss_dssp CSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC-TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTT
T ss_pred cccCcccceEeCCCcCeEEEeCCCCcEEEEECcc-cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhc
Confidence 53 588999999999999999999999999977 6777888899999999999999999999999999999985321
Q ss_pred ------------------------------------------eeEeEeeccccCeEEEEEcCCCC---cEEEEEecCCcc
Q 013282 394 ------------------------------------------YEKEQEIDFFGEISGISFSPDTE---SLFIGVWDRTYG 428 (446)
Q Consensus 394 ------------------------------------------~~~~~~~~~~~~v~~~~~spdg~---~l~~~~~D~~~~ 428 (446)
..+..+.+|.+.|.+++|+|++. .|++|+.||.++
T Consensus 432 ~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vr 511 (524)
T 2j04_B 432 HGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLT 511 (524)
T ss_dssp TCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEE
T ss_pred cccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEE
Confidence 11122335677899999999964 899999999888
Q ss_pred eEE
Q 013282 429 SLL 431 (446)
Q Consensus 429 ~~l 431 (446)
.|-
T Consensus 512 lw~ 514 (524)
T 2j04_B 512 LEY 514 (524)
T ss_dssp EEE
T ss_pred EEE
Confidence 765
No 55
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.2e-34 Score=278.69 Aligned_cols=232 Identities=13% Similarity=0.092 Sum_probs=191.5
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
+|.+++| ++++|++|+.||.|++|++.+... .+...+..|...|.++.| +|++. +|++++.|++|++||+.+++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~--s~~~~-~l~s~s~d~~v~vwd~~~~~ 88 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW-KHARTFSDHDKIVTCVDW--APKSN-RIVTCSQDRNAYVYEKRPDG 88 (377)
T ss_dssp CCSCCEECSSSSEEECCCSSSCBCEEEEETTEE-EECCCBCCCSSCEEEEEE--CTTTC-CEEEEETTSSEEEC------
T ss_pred cEEEEEECCCCCEEEEecCCCEEEEEEccCCce-EEEEEEecCCceEEEEEE--eCCCC-EEEEEeCCCeEEEEEcCCCC
Confidence 5777887 899999999999999999986531 223556688899999988 99987 69999999999999999877
Q ss_pred ---eeEee-eCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCc---eEEEecC-CCCceeEEEECCCCCEEEEEeCCC
Q 013282 269 ---LSKHF-RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGK---TIASLCG-HLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 269 ---~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~---~~~~~~~-~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
....+ .|...|.+++|+|++++|++++.|+.|++||+++++ ....+.+ |...|.+++|+|++++|++|+.|+
T Consensus 89 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~ 168 (377)
T 3dwl_C 89 TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADR 168 (377)
T ss_dssp CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSS
T ss_pred ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCC
Confidence 34444 388999999999999999999999999999999887 4777887 999999999999999999999999
Q ss_pred cEEEEEccC-----------------CCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCee----EeEe
Q 013282 341 TCRIWDLRN-----------------LSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE----KEQE 399 (446)
Q Consensus 341 ~v~iwd~~~-----------------~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~----~~~~ 399 (446)
+|++||++. .+.++..+ +|.+.|++++|+|+|++|++++.||.|++||+.++.. +..+
T Consensus 169 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 247 (377)
T 3dwl_C 169 KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITV 247 (377)
T ss_dssp CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCE
T ss_pred EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEee
Confidence 999999852 13345555 8999999999999999999999999999999999877 7778
Q ss_pred eccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 400 IDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 400 ~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
..|...|.+++|+|+|++|++++.++.+
T Consensus 248 ~~~~~~v~~~~~s~~~~~l~~~~~~~~~ 275 (377)
T 3dwl_C 248 KLSQLPLRSLLWANESAIVAAGYNYSPI 275 (377)
T ss_dssp ECSSSCEEEEEEEETTEEEEEESSSSEE
T ss_pred cCCCCceEEEEEcCCCCEEEEEcCCcEE
Confidence 8899999999999999999888655443
No 56
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-33 Score=270.95 Aligned_cols=292 Identities=14% Similarity=0.109 Sum_probs=225.2
Q ss_pred ccceeee-eeccccccceeecc-ceeeeEEecccCeEEEecCCeEEEEecCC---CCce-EEEecCCCCCCCCCCCCCcc
Q 013282 111 GASYYEF-RRNSRSVKSTILHF-QLRNLVWATSKHDVYLMSHFSVIHWSSLT---SSRS-QVLNVSGHVAPSEKHPGSLL 184 (446)
Q Consensus 111 ~~~~~~f-~~~~~~v~~~~~h~-~~~~l~~~~~~~~v~~~~~~~i~~w~~~~---~~~~-~~~~~~g~~~~~~~~~g~~~ 184 (446)
+.....+ ..|...+.+..+++ ..+.+ +....++.|++|+..+ +... ....+.
T Consensus 52 g~~~~~~~~~h~~~V~~~~~s~~~~~~l--------~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~-------------- 109 (437)
T 3gre_A 52 GKLIATLMENEPNSITSSAVSPGETPYL--------ITGSDQGVIKIWNLKEIIVGEVYSSSLTYD-------------- 109 (437)
T ss_dssp CCEEEEECTTTTSCEEEEEEECSSSCEE--------EEEETTSEEEEEEHHHHHTTCCCSCSEEEE--------------
T ss_pred ceEEeeeccCCCCceEEEEECCCCCCEE--------EEecCCceEEEeECcccccCcccceeeecc--------------
Confidence 3444555 44556666666666 43333 3334577889999755 2100 011110
Q ss_pred ccCccceEEEEEe--CCcEEEEeccCCcEEEEEcC---CCCeeeE-----EEEe--ec--CCCceeeEEEEeCCCCCeEE
Q 013282 185 EGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLD---RPGVSFC-----SRTT--YD--DNAITNAVEIYGSPSGAVHF 250 (446)
Q Consensus 185 ~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~---~~~~~~~-----~~~~--~~--~~~~v~~i~~~~s~~~~~~l 250 (446)
+...|.+++| ++++|++|+.||.|++|++. .+..... .... .. +...+.++.+.+++++. +|
T Consensus 110 ---h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 185 (437)
T 3gre_A 110 ---CSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKS-LL 185 (437)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCE-EE
T ss_pred ---CCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCC-EE
Confidence 1226999999 78999999999999999995 3322110 1111 11 55667777776788877 79
Q ss_pred EEEeCCCcEEEEecCcceeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec-CCCCceeEEEE
Q 013282 251 TASNNDCGVRDFDMGKYQLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAW 326 (446)
Q Consensus 251 ~s~s~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~ 326 (446)
++++.|+.|++||+.+++++..+. |...|.+++|+|++++|++|+.||.|++||+++++++..+. .|...|.+++|
T Consensus 186 ~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 186 VALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 999999999999999999988887 57899999999999999999999999999999999999886 78889999977
Q ss_pred CC----CCCEEEEEeCCCcEEEEEccCCCcceEEEec--------------------------CCCceEEEEEccCCCEE
Q 013282 327 HP----NGVTFATGNQDKTCRIWDLRNLSESVAVLKG--------------------------NLGAIRSIRYTSDGRYM 376 (446)
Q Consensus 327 ~p----~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~--------------------------~~~~v~~l~~s~dg~~l 376 (446)
+| ++.+|++|+.|++|++||++. ++++..+.+ |...|++++|+ ++++|
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l 343 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVK-GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKIL 343 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTT-TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCC-CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEE
Confidence 65 678999999999999999976 666666654 45568888998 77899
Q ss_pred EEEeCCCeEEEEEcCCCeeEeEeec-------------------------------------cccCeEEEEEcCC--CCc
Q 013282 377 ATAEPADFVHVYDVKSGYEKEQEID-------------------------------------FFGEISGISFSPD--TES 417 (446)
Q Consensus 377 ~~~~~dg~i~iwd~~~~~~~~~~~~-------------------------------------~~~~v~~~~~spd--g~~ 417 (446)
++|+.|+.|++||+.+++....+.+ |...|++++|+++ +.+
T Consensus 344 ~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~ 423 (437)
T 3gre_A 344 LTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPL 423 (437)
T ss_dssp EEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEE
T ss_pred EecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceE
Confidence 9999999999999999876666654 7889999999998 789
Q ss_pred EEEEEecCCcceE
Q 013282 418 LFIGVWDRTYGSL 430 (446)
Q Consensus 418 l~~~~~D~~~~~~ 430 (446)
|++|+.||.+..|
T Consensus 424 l~s~~~dG~I~iw 436 (437)
T 3gre_A 424 LVACDNSGLIGIF 436 (437)
T ss_dssp EEEEETTSCEEEE
T ss_pred EEEEcCCceEEEe
Confidence 9999999998765
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=9.6e-34 Score=272.25 Aligned_cols=282 Identities=13% Similarity=0.062 Sum_probs=210.8
Q ss_pred eccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe-
Q 013282 119 RNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV- 197 (446)
Q Consensus 119 ~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~- 197 (446)
.+...+.++.++++.+.++.+. .++.|.+|+..++.......+.+|.. .|.+++|
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~--------~d~~i~iw~~~~~~~~~~~~~~~h~~----------------~v~~~~~s 64 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTT--------ATNQVELYEQDGNGWKHARTFSDHDK----------------IVTCVDWA 64 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCC--------SSSCBCEEEEETTEEEECCCBCCCSS----------------CEEEEEEC
T ss_pred cCCCcEEEEEECCCCCEEEEec--------CCCEEEEEEccCCceEEEEEEecCCc----------------eEEEEEEe
Confidence 3445788888777655444332 36678999987663233333444322 5899998
Q ss_pred -CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce---eeEee
Q 013282 198 -KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ---LSKHF 273 (446)
Q Consensus 198 -~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~---~~~~~ 273 (446)
++++|++|+.||.|++|++.+............|...|.++.+ +|++. +|++++.|+.|++||+.+++ +...+
T Consensus 65 ~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~ 141 (377)
T 3dwl_C 65 PKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRW--SPNED-KFAVGSGARVISVCYFEQENDWWVSKHL 141 (377)
T ss_dssp TTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEEC--CTTSS-CCEEEESSSCEEECCC-----CCCCEEE
T ss_pred CCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEE--CCCCC-EEEEEecCCeEEEEEECCcccceeeeEe
Confidence 7899999999999999999876522224556678888988887 99987 69999999999999998876 35555
Q ss_pred e--CCCCeeEEEECCCCCEEEEEecCCcEEEEECC------------------CCceEEEecCCCCceeEEEECCCCCEE
Q 013282 274 R--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM------------------TGKTIASLCGHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 274 ~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~------------------~~~~~~~~~~~~~~v~~~~~~p~~~~l 333 (446)
. |...|.+++|+|++++|++++.|+.|++||+. .++++..+ +|...|.+++|+|++++|
T Consensus 142 ~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l 220 (377)
T 3dwl_C 142 KRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNAL 220 (377)
T ss_dssp CSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCE
T ss_pred ecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEE
Confidence 5 78999999999999999999999999999985 35566667 899999999999999999
Q ss_pred EEEeCCCcEEEEEccCCCcc----eEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCe-e-------------
Q 013282 334 ATGNQDKTCRIWDLRNLSES----VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY-E------------- 395 (446)
Q Consensus 334 ~sgs~d~~v~iwd~~~~~~~----~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~-~------------- 395 (446)
++|+.|++|++||++. ... +..+.+|...|.+++|+|+|++|++|+.++.+ +|+..... .
T Consensus 221 ~~~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 298 (377)
T 3dwl_C 221 AYAGHDSSVTIAYPSA-PEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTS 298 (377)
T ss_dssp EEEETTTEEC-CEECS-TTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCC
T ss_pred EEEeCCCcEEEEECCC-CCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccc
Confidence 9999999999999976 554 77888999999999999999999998866655 77654211 0
Q ss_pred -------------E---------eEe----------------eccccCeEEEEEcCCCC----cEEEEEecCCcceE
Q 013282 396 -------------K---------EQE----------------IDFFGEISGISFSPDTE----SLFIGVWDRTYGSL 430 (446)
Q Consensus 396 -------------~---------~~~----------------~~~~~~v~~~~~spdg~----~l~~~~~D~~~~~~ 430 (446)
. ..+ ..|.+.|+++.+.+... .|++|+.||+++.|
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iW 375 (377)
T 3dwl_C 299 FTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLW 375 (377)
T ss_dssp BSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred cccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEe
Confidence 0 000 12888999999776543 59999999998876
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-32 Score=260.91 Aligned_cols=237 Identities=14% Similarity=0.150 Sum_probs=202.3
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|.+++| ++++|++|+.||.|++|++..... .....+..|...|.++.| +++ +. +|++++.||.|++||+.+
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~-~~~~~~~~h~~~v~~~~~--~~~~~~~-~l~s~~~dg~v~iwd~~~ 88 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDW--AHPKFGT-ILASCSYDGKVLIWKEEN 88 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTSCEEEEEEET
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc-eeeeEecCCCCcEEEEEe--CCCCCCC-EEEEeccCCEEEEEEcCC
Confidence 6999998 899999999999999999975432 334566788999999988 766 65 799999999999999998
Q ss_pred ce--eeEeee-CCCCeeEEEECCC--CCEEEEEecCCcEEEEECCCCc--eEEEecCCCCceeEEEECC-----------
Q 013282 267 YQ--LSKHFR-FPWPVNHSSQSPD--GKLLIIVGDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWHP----------- 328 (446)
Q Consensus 267 ~~--~~~~~~-~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~p----------- 328 (446)
++ .+..+. |...|.+++|+|+ +.+|++++.++.|++||++++. ....+.+|...|.+++|+|
T Consensus 89 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 168 (379)
T 3jrp_A 89 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 168 (379)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---------
T ss_pred CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccccC
Confidence 86 555555 8889999999999 9999999999999999998773 4556778999999999999
Q ss_pred --CCCEEEEEeCCCcEEEEEccCCCc---ceEEEecCCCceEEEEEccC---CCEEEEEeCCCeEEEEEcCCCe-----e
Q 013282 329 --NGVTFATGNQDKTCRIWDLRNLSE---SVAVLKGNLGAIRSIRYTSD---GRYMATAEPADFVHVYDVKSGY-----E 395 (446)
Q Consensus 329 --~~~~l~sgs~d~~v~iwd~~~~~~---~~~~~~~~~~~v~~l~~s~d---g~~l~~~~~dg~i~iwd~~~~~-----~ 395 (446)
++.+|++|+.|+.|++||++.... ....+.+|...|.+++|+|+ +++|++++.||.|++||+.++. .
T Consensus 169 ~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 248 (379)
T 3jrp_A 169 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT 248 (379)
T ss_dssp -CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEE
T ss_pred CCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceee
Confidence 699999999999999999976332 44677889999999999999 8999999999999999999863 2
Q ss_pred EeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 396 KEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 396 ~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
......|...|.+++|+|+|++|++++.|+.+..|-
T Consensus 249 ~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~ 284 (379)
T 3jrp_A 249 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 284 (379)
T ss_dssp ESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEE
T ss_pred eeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEe
Confidence 222234778999999999999999999999887664
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=3e-32 Score=260.82 Aligned_cols=237 Identities=13% Similarity=0.109 Sum_probs=206.5
Q ss_pred ceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 190 ~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.+|.++++ ++++|++|+.+|.|++|++.+... .....+..|...|.++.+ +|++. +|++++.||.|++||+.++
T Consensus 9 ~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-~~~~~~~~h~~~v~~~~~--~~~~~-~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 9 EPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-VQVHELKEHNGQVTGVDW--APDSN-RIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp SCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-EEEEEEECCSSCEEEEEE--ETTTT-EEEEEETTSCEEEEEEETT
T ss_pred CCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-EeeeeecCCCCcccEEEE--eCCCC-EEEEEcCCCeEEEEECCCC
Confidence 36888888 889999999999999999977642 134566688899999988 89887 6999999999999999888
Q ss_pred eeeEee---eCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCce---EEE-ecCCCCceeEEEECCCCCEEEEEeCCC
Q 013282 268 QLSKHF---RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT---IAS-LCGHLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 268 ~~~~~~---~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~---~~~-~~~~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
+....+ .+...|.+++|+|++++|++++.++.|++||+..++. ... ..+|...|.+++|+|++++|++|+.|+
T Consensus 85 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg 164 (372)
T 1k8k_C 85 TWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDF 164 (372)
T ss_dssp EEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCC
Confidence 755543 3788999999999999999999999999999988763 333 357899999999999999999999999
Q ss_pred cEEEEEcc-----------------CCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc
Q 013282 341 TCRIWDLR-----------------NLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 403 (446)
Q Consensus 341 ~v~iwd~~-----------------~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 403 (446)
.|++||++ ..+..+..+.+|...|.+++|+|++++|++++.|+.|++||+++++.+..+..|.
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~ 244 (372)
T 1k8k_C 165 KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASET 244 (372)
T ss_dssp CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSS
T ss_pred CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCC
Confidence 99999964 2357788888999999999999999999999999999999999999999999999
Q ss_pred cCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 404 GEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 404 ~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
.+|.+++|+|++++|++| .|+.+..|-
T Consensus 245 ~~v~~~~~~~~~~~l~~~-~d~~i~i~~ 271 (372)
T 1k8k_C 245 LPLLAVTFITESSLVAAG-HDCFPVLFT 271 (372)
T ss_dssp CCEEEEEEEETTEEEEEE-TTSSCEEEE
T ss_pred CCeEEEEEecCCCEEEEE-eCCeEEEEE
Confidence 999999999999988877 888876553
No 60
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.7e-32 Score=262.70 Aligned_cols=262 Identities=12% Similarity=0.059 Sum_probs=212.8
Q ss_pred CeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCC
Q 013282 143 HDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 143 ~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
..+....++.|.+|+..+++. ...+.+|.. .|.+++| ++++|++|+.||.|++|++.+..
T Consensus 111 ~l~~~~~dg~i~iwd~~~~~~--~~~~~~h~~----------------~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~ 172 (420)
T 3vl1_A 111 RFILGTTEGDIKVLDSNFNLQ--REIDQAHVS----------------EITKLKFFPSGEALISSSQDMQLKIWSVKDGS 172 (420)
T ss_dssp EEEEEETTSCEEEECTTSCEE--EEETTSSSS----------------CEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEEEECCCCEEEEeCCCcce--eeecccccC----------------ccEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 344445688999999876633 333333322 6999999 88999999999999999998775
Q ss_pred eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee----C---------------------
Q 013282 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR----F--------------------- 275 (446)
Q Consensus 221 ~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~----~--------------------- 275 (446)
.. ..+..|...|.++.+ +|++. +|++++.|+.|++||+.+++.+..+. +
T Consensus 173 ~~---~~~~~h~~~v~~~~~--~~~~~-~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 246 (420)
T 3vl1_A 173 NP---RTLIGHRATVTDIAI--IDRGR-NVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEIS 246 (420)
T ss_dssp CC---EEEECCSSCEEEEEE--ETTTT-EEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGC
T ss_pred Cc---eEEcCCCCcEEEEEE--cCCCC-EEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecc
Confidence 44 445688899999988 89988 68999999999999999999888876 2
Q ss_pred CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec-CCCCceeEEEECCCCC-EEEEEeCCCcEEEEEccCCCcc
Q 013282 276 PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHPNGV-TFATGNQDKTCRIWDLRNLSES 353 (446)
Q Consensus 276 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~p~~~-~l~sgs~d~~v~iwd~~~~~~~ 353 (446)
..++.+++|+|++++|++++.+|.|++||+++++.+..+. +|...|.+++|+|++. +|++|+.||.|++||+++...+
T Consensus 247 ~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~ 326 (420)
T 3vl1_A 247 TSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECP 326 (420)
T ss_dssp CCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSC
T ss_pred cCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCc
Confidence 2455566678999999999999999999999998877775 5889999999999998 9999999999999999875566
Q ss_pred eEEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCe---------eEeEeeccccCeEEEEEcCCCC---cEEE
Q 013282 354 VAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY---------EKEQEIDFFGEISGISFSPDTE---SLFI 420 (446)
Q Consensus 354 ~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~spdg~---~l~~ 420 (446)
+..+.+ |...|+++.| |++++|++++.|+.|++|++.... ....+..|.+.|.+++|+|+++ .|++
T Consensus 327 ~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a 405 (420)
T 3vl1_A 327 VGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLE 405 (420)
T ss_dssp SEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEE
T ss_pred hhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEE
Confidence 788877 6677888755 678899999999999999988732 2234556888999999999999 6777
Q ss_pred EEecCCcce
Q 013282 421 GVWDRTYGS 429 (446)
Q Consensus 421 ~~~D~~~~~ 429 (446)
++.++.+..
T Consensus 406 ~g~~g~~~~ 414 (420)
T 3vl1_A 406 VGKNNFCAL 414 (420)
T ss_dssp EETTTEEEE
T ss_pred EcCCceEEE
Confidence 777765543
No 61
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.6e-32 Score=256.59 Aligned_cols=271 Identities=12% Similarity=0.062 Sum_probs=223.8
Q ss_pred ccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCce-EEEecCCCCCCCCCCCCCccccCccceEEEEEe-
Q 013282 120 NSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRS-QVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV- 197 (446)
Q Consensus 120 ~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~-~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~- 197 (446)
+...+.++.+++..+.++. ...++.|.+|+..++... ......+|. ..|.+++|
T Consensus 10 h~~~v~~~~~s~~~~~l~~--------~~~d~~v~iw~~~~~~~~~~~~~~~~~~----------------~~v~~~~~~ 65 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLI--------TSWDGSLTVYKFDIQAKNVDLLQSLRYK----------------HPLLCCNFI 65 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEE--------EETTSEEEEEEEETTTTEEEEEEEEECS----------------SCEEEEEEE
T ss_pred CCCcEEEEEEcCCCCEEEE--------EcCCCeEEEEEeCCCCccccceeeeecC----------------CceEEEEEC
Confidence 4456666666665444433 345678899998777521 112222221 15888888
Q ss_pred -CCc-EEEEeccCCcEEEEEc-CCCCeeeEEEEeec--CCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc------
Q 013282 198 -KDK-LLVAGGFQGELICKHL-DRPGVSFCSRTTYD--DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK------ 266 (446)
Q Consensus 198 -~~~-~l~tg~~dg~i~vw~~-~~~~~~~~~~~~~~--~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~------ 266 (446)
+++ +|++|+.+|.|++|++ ..... ..+.. |...|.++.+ +| +. +|++++.|+.|++||+.+
T Consensus 66 ~~~~~~l~~~~~dg~i~~wd~~~~~~~----~~~~~~~~~~~v~~l~~--~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~ 137 (342)
T 1yfq_A 66 DNTDLQIYVGTVQGEILKVDLIGSPSF----QALTNNEANLGICRICK--YG-DD-KLIAASWDGLIEVIDPRNYGDGVI 137 (342)
T ss_dssp ESSSEEEEEEETTSCEEEECSSSSSSE----EECBSCCCCSCEEEEEE--ET-TT-EEEEEETTSEEEEECHHHHTTBCE
T ss_pred CCCCcEEEEEcCCCeEEEEEeccCCce----EeccccCCCCceEEEEe--CC-CC-EEEEEcCCCeEEEEcccccccccc
Confidence 889 9999999999999999 76643 44556 8889999888 78 65 799999999999999988
Q ss_pred ---ceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-Cc--eEEEecCCCCceeEEEECC-CCCEEEEEeCC
Q 013282 267 ---YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GK--TIASLCGHLDFSFASAWHP-NGVTFATGNQD 339 (446)
Q Consensus 267 ---~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~--~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d 339 (446)
++++..+.+...|.+++|+|++ +++++.++.|++||+++ +. .......|...+.+++|+| +++++++|+.|
T Consensus 138 ~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~d 215 (342)
T 1yfq_A 138 AVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSID 215 (342)
T ss_dssp EEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETT
T ss_pred cccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecC
Confidence 7777778889999999999987 99999999999999998 54 3334556888999999999 99999999999
Q ss_pred CcEEEEEccCC-----CcceEEEecCCC---------ceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc-cc
Q 013282 340 KTCRIWDLRNL-----SESVAVLKGNLG---------AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-FG 404 (446)
Q Consensus 340 ~~v~iwd~~~~-----~~~~~~~~~~~~---------~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~ 404 (446)
|.|++|+++.. ......+..|.. .|++++|+|++++|++++.||.|++||+.+++.+..+..| .+
T Consensus 216 g~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~ 295 (342)
T 1yfq_A 216 GRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNED 295 (342)
T ss_dssp SEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSS
T ss_pred CcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCC
Confidence 99999999764 377888888865 9999999999999999999999999999999999999888 99
Q ss_pred CeEEEEEcCCCCcEEEEEecCC
Q 013282 405 EISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 405 ~v~~~~~spdg~~l~~~~~D~~ 426 (446)
.|.+++ |++++|++++.|+.
T Consensus 296 ~v~~~~--~~~~~l~s~s~Dg~ 315 (342)
T 1yfq_A 296 SVVKIA--CSDNILCLATSDDT 315 (342)
T ss_dssp EEEEEE--ECSSEEEEEEECTH
T ss_pred CceEec--CCCCeEEEEecCCc
Confidence 999999 99999999999998
No 62
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.1e-32 Score=257.28 Aligned_cols=237 Identities=15% Similarity=0.143 Sum_probs=203.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCee-eEEEEeecCCCceeeEEEEeCC--CCCeEEEEEeCCCcEEEEecC
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVS-FCSRTTYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~-~~~~~~~~~~~~v~~i~~~~s~--~~~~~l~s~s~dg~v~iwd~~ 265 (446)
.|.+++| ++++|++|+.||.|++|++...... .....+..|...|.++.| +| ++. +|++++.||.|++||+.
T Consensus 13 ~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~d~~-~l~s~~~dg~v~vwd~~ 89 (351)
T 3f3f_A 13 LVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDW--ASPEYGR-IIASASYDKTVKLWEED 89 (351)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEE--CCGGGCS-EEEEEETTSCEEEEEEC
T ss_pred ceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEE--cCCCCCC-EEEEEcCCCeEEEEecC
Confidence 6999998 8899999999999999999865432 334566789999999988 78 465 79999999999999998
Q ss_pred cc---------eeeEeee-CCCCeeEEEECCC--CCEEEEEecCCcEEEEECCCCceEEEec-------------CCCCc
Q 013282 266 KY---------QLSKHFR-FPWPVNHSSQSPD--GKLLIIVGDNPDGLLVDSMTGKTIASLC-------------GHLDF 320 (446)
Q Consensus 266 ~~---------~~~~~~~-~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------------~~~~~ 320 (446)
++ +.+..+. |...|.+++|+|+ +++|++++.|+.|++||+++++.+..+. +|...
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQS 169 (351)
T ss_dssp TTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCC
T ss_pred CCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccc
Confidence 76 4555665 8899999999999 9999999999999999999887554332 57889
Q ss_pred eeEEEECCC---CCEEEEEeCCCcEEEEEccCCCc--ceEEEecCCCceEEEEEccCC----CEEEEEeCCCeEEEEEcC
Q 013282 321 SFASAWHPN---GVTFATGNQDKTCRIWDLRNLSE--SVAVLKGNLGAIRSIRYTSDG----RYMATAEPADFVHVYDVK 391 (446)
Q Consensus 321 v~~~~~~p~---~~~l~sgs~d~~v~iwd~~~~~~--~~~~~~~~~~~v~~l~~s~dg----~~l~~~~~dg~i~iwd~~ 391 (446)
+.+++|+|+ +.++++++.++.+.+|+... .. .+..+.+|...|++++|+|++ ++|++|+.||.|++||++
T Consensus 170 ~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~ 248 (351)
T 3f3f_A 170 DFCLSWCPSRFSPEKLAVSALEQAIIYQRGKD-GKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKIT 248 (351)
T ss_dssp CEEEEECCCSSSCCEEEEEETTEEEEEEECTT-SCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEE
T ss_pred eeEEEeccCCCCCcEEEEecCCCcEEEEccCC-CceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCC
Confidence 999999997 99999999999998888754 44 367778899999999999998 899999999999999998
Q ss_pred CC----------------------------------------------eeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 392 SG----------------------------------------------YEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 392 ~~----------------------------------------------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
++ ..+..+.+|.+.|++++|+|++++|++++.|+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg 328 (351)
T 3f3f_A 249 EKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDG 328 (351)
T ss_dssp ECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTS
T ss_pred CCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCC
Confidence 75 45666778999999999999999999999999
Q ss_pred CcceEE
Q 013282 426 TYGSLL 431 (446)
Q Consensus 426 ~~~~~l 431 (446)
.+..|-
T Consensus 329 ~v~iw~ 334 (351)
T 3f3f_A 329 KVRLWK 334 (351)
T ss_dssp CEEEEE
T ss_pred cEEEEe
Confidence 887663
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=4.5e-31 Score=247.00 Aligned_cols=268 Identities=15% Similarity=0.203 Sum_probs=219.7
Q ss_pred eEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEE
Q 013282 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELIC 213 (446)
Q Consensus 136 l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~v 213 (446)
+-|+.. +.|....|++|++||..+++....+...+|.. .|.++++ ++++|++|+.||+|++
T Consensus 31 l~WS~~-~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~----------------~V~~v~~~~~~~~l~sgs~Dg~v~i 93 (318)
T 4ggc_A 31 VDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGE----------------YISSVAWIKEGNYLAVGTSSAEVQL 93 (318)
T ss_dssp EEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTC----------------CEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCC----------------eEEEEEECCCCCEEEEEECCCcEEE
Confidence 446543 46666679999999999998777777665432 5899998 8999999999999999
Q ss_pred EEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce-eeEeee-CCCCeeEEEECCCCCEE
Q 013282 214 KHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ-LSKHFR-FPWPVNHSSQSPDGKLL 291 (446)
Q Consensus 214 w~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l 291 (446)
|++.+... .....+|...+.++.. .+. ++++++.++.+++|+..... .+..+. |...+.++.+++++++|
T Consensus 94 w~~~~~~~---~~~~~~h~~~~~~~~~----~~~-~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 165 (318)
T 4ggc_A 94 WDVQQQKR---LRNMTSHSARVGSLSW----NSY-ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHL 165 (318)
T ss_dssp EETTTTEE---EEEEECCSSCEEEEEE----ETT-EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eecCCcee---EEEecCccceEEEeec----CCC-EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEE
Confidence 99987743 4556678777766543 444 79999999999999987654 344444 88999999999999999
Q ss_pred EEEecCCcEEEEECCCCce----EEEecCCCCceeEEEECCCCC-E--EEEEeCCCcEEEEEccCCCcceEEEecCCCce
Q 013282 292 IIVGDNPDGLLVDSMTGKT----IASLCGHLDFSFASAWHPNGV-T--FATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 364 (446)
Q Consensus 292 ~~~~~d~~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~p~~~-~--l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v 364 (446)
++++.|+.|++||+++++. ......+.+.|.+++++|.+. . +++++.+++|++||.+. ...... ..+...+
T Consensus 166 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~-~~~~~~-~~~~~~v 243 (318)
T 4ggc_A 166 ASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS-GACLSA-VDAHSQV 243 (318)
T ss_dssp EEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT-CCEEEE-EECSSCE
T ss_pred EEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc-cccccc-ccceeee
Confidence 9999999999999987753 344566888999999999654 3 34677899999999965 444333 4567789
Q ss_pred EEEEEccCCCEEEEEe--CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 365 RSIRYTSDGRYMATAE--PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 365 ~~l~~s~dg~~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
..+.|+|+++.+++++ .|+.|+|||+++++++..+.+|.+.|++++|+|+|++|++|+.|++++.|
T Consensus 244 ~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iW 311 (318)
T 4ggc_A 244 CSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLW 311 (318)
T ss_dssp EEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEE
T ss_pred eeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEE
Confidence 9999999999887765 78999999999999999999999999999999999999999999999876
No 64
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.1e-31 Score=259.56 Aligned_cols=260 Identities=17% Similarity=0.220 Sum_probs=216.8
Q ss_pred cCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe-CCcEEEEeccCCcEEEEEcCCCC
Q 013282 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 142 ~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
...+....++.|++|+..+++ .+..+.+|.. .|.++++ .+.+|++|+.||+|++|++.++.
T Consensus 133 ~~l~sgs~dg~i~vwd~~~~~--~~~~~~~h~~----------------~V~~l~~~~~~~l~s~s~dg~i~vwd~~~~~ 194 (464)
T 3v7d_B 133 NYVITGADDKMIRVYDSINKK--FLLQLSGHDG----------------GVWALKYAHGGILVSGSTDRTVRVWDIKKGC 194 (464)
T ss_dssp TEEEEEETTSCEEEEETTTTE--EEEEECCCSS----------------CEEEEEECSTTEEEEEETTSCEEEEETTTTE
T ss_pred CEEEEEcCCCcEEEEECCCCc--EEEEEeCCCc----------------CEEEEEEcCCCEEEEEeCCCCEEEEECCCCc
Confidence 334445668899999998874 4444455432 5999999 45599999999999999998764
Q ss_pred eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee-----------------------Eeee-CC
Q 013282 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS-----------------------KHFR-FP 276 (446)
Q Consensus 221 ~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~-----------------------~~~~-~~ 276 (446)
+...+.+|...|.++.+...+++. ++++++.||.|++||+.++... ..+. |.
T Consensus 195 ---~~~~~~~h~~~v~~l~~~~~~~~~-~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (464)
T 3v7d_B 195 ---CTHVFEGHNSTVRCLDIVEYKNIK-YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHM 270 (464)
T ss_dssp ---EEEEECCCSSCEEEEEEEESSSCE-EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCS
T ss_pred ---EEEEECCCCCccEEEEEecCCCCC-EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCcc
Confidence 346667899999999996666765 7999999999999999876532 2233 66
Q ss_pred CCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEE
Q 013282 277 WPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAV 356 (446)
Q Consensus 277 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~ 356 (446)
..+.++ +|+++++++++.|+.|++||+++++++..+.+|...|.+++|+|+++++++|+.||+|++||+++ ++++..
T Consensus 271 ~~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~-~~~~~~ 347 (464)
T 3v7d_B 271 ASVRTV--SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLEN-GELMYT 347 (464)
T ss_dssp SCEEEE--EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTT-TEEEEE
T ss_pred ceEEEE--cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CcEEEE
Confidence 666666 57899999999999999999999999999999999999999999999999999999999999976 889999
Q ss_pred EecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 357 LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 357 ~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+.+|...|.+++|+ +++|++|+.||.|++||+.++...... .+...+..++|+|++++|++|+ |+.+..|
T Consensus 348 ~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~-dg~i~iw 417 (464)
T 3v7d_B 348 LQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSY-HHTNLSAITTFYVSDNILVSGS-ENQFNIY 417 (464)
T ss_dssp ECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEE-ECTTCCCEEEEEECSSEEEEEE-TTEEEEE
T ss_pred EeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeee-cCCCCccEEEEEeCCCEEEEec-CCeEEEE
Confidence 99999999999997 579999999999999999998765544 3667788899999999999887 7765443
No 65
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=252.36 Aligned_cols=229 Identities=14% Similarity=0.154 Sum_probs=205.3
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.++++ ++++|++|+.||.|++|++.+... ...+..|...|.++.+ +|++. +|++++.||.|++||+.+++
T Consensus 34 ~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~---~~~~~~h~~~v~~~~~--~~~~~-~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 34 PLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER---LGTLDGHTGTIWSIDV--DCFTK-YCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp CEEEEEECTTSCEEEEEESSSCEEEEETTTCCE---EEEECCCSSCEEEEEE--CTTSS-EEEEEETTTEEEEEETTTCC
T ss_pred eEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh---hhhhhhcCCcEEEEEE--cCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 5999998 889999999999999999987754 3556678889999888 99887 69999999999999999999
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecC-----CcEEEEECCCCc-----------eEEEecCCCC--ceeEEEECCCC
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGK-----------TIASLCGHLD--FSFASAWHPNG 330 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~-----------~~~~~~~~~~--~v~~~~~~p~~ 330 (446)
.+..+.+..++.+++|+|+++++++++.+ +.|++||+..+. .+..+..|.. .+.+++|+|++
T Consensus 108 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (369)
T 3zwl_B 108 CVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG 187 (369)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG
T ss_pred EEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC
Confidence 99999999999999999999999999998 999999987653 3444556666 99999999999
Q ss_pred CEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEE
Q 013282 331 VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 410 (446)
Q Consensus 331 ~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 410 (446)
++|++++.||.|++||++.....+..+..|...|.+++|+|++++|++++.|+.|++||++++..+..+. +...+..++
T Consensus 188 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~ 266 (369)
T 3zwl_B 188 KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAV 266 (369)
T ss_dssp CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEE
Confidence 9999999999999999977578888999999999999999999999999999999999999998777766 778899999
Q ss_pred EcCCCCcEEEEEecCC
Q 013282 411 FSPDTESLFIGVWDRT 426 (446)
Q Consensus 411 ~spdg~~l~~~~~D~~ 426 (446)
|+|++++|++++.++.
T Consensus 267 ~~~~~~~l~~~~~~~~ 282 (369)
T 3zwl_B 267 ITPLKEFIILGGGQEA 282 (369)
T ss_dssp ECSSSSEEEEEECCC-
T ss_pred ecCCCceEEEeecCCC
Confidence 9999999999988773
No 66
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=2.4e-31 Score=257.51 Aligned_cols=239 Identities=21% Similarity=0.314 Sum_probs=206.5
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe----------ecCCCceeeEEEEeCCCCCeEEEEEeCCC
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTT----------YDDNAITNAVEIYGSPSGAVHFTASNNDC 257 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~----------~~~~~~v~~i~~~~s~~~~~~l~s~s~dg 257 (446)
.|.++++ ++++|++|+.||.|++|++.+.......... ..|...|.++.+ +|++..+|++++.||
T Consensus 45 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~s~~~d~ 122 (408)
T 4a11_B 45 GINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQW--YPHDTGMFTSSSFDK 122 (408)
T ss_dssp CEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEE--CTTCTTCEEEEETTS
T ss_pred cEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEE--ccCCCcEEEEEeCCC
Confidence 6888888 6799999999999999999876543221111 248888999888 885555799999999
Q ss_pred cEEEEecCcceeeEeeeCCCCeeEEEECCC---CCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCC-EE
Q 013282 258 GVRDFDMGKYQLSKHFRFPWPVNHSSQSPD---GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGV-TF 333 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l 333 (446)
.|++||+.+++....+.+...+.++.++|. +.++++++.++.|++||+++++.+..+.+|...|.+++|+|++. +|
T Consensus 123 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll 202 (408)
T 4a11_B 123 TLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYIL 202 (408)
T ss_dssp EEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEE
T ss_pred eEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEE
Confidence 999999999999999999999999999984 45999999999999999999999999999999999999999988 69
Q ss_pred EEEeCCCcEEEEEccCCCcceEEE---------------ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCe----
Q 013282 334 ATGNQDKTCRIWDLRNLSESVAVL---------------KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY---- 394 (446)
Q Consensus 334 ~sgs~d~~v~iwd~~~~~~~~~~~---------------~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~---- 394 (446)
++|+.||.|++||++....++..+ .+|...|.+++|+|+|++|++++.||.|++||+.++.
T Consensus 203 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 282 (408)
T 4a11_B 203 ATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLV 282 (408)
T ss_dssp EEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCC
T ss_pred EEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCcccee
Confidence 999999999999998755566655 5788899999999999999999999999999987643
Q ss_pred -------------------------------------------eEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 395 -------------------------------------------EKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 395 -------------------------------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
.+..+.+|.+.|.+++|+|++++|++++.|+.+..|-
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~ 362 (408)
T 4a11_B 283 NYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWV 362 (408)
T ss_dssp CCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEE
T ss_pred ccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEe
Confidence 3445566889999999999999999999999987663
No 67
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1e-31 Score=256.17 Aligned_cols=237 Identities=13% Similarity=0.112 Sum_probs=201.7
Q ss_pred eEEEEEe--C---CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 191 QVSTLAV--K---DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 191 ~v~~l~~--~---~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
.|.+++| + +++|++|+.||.|++|++.+.+... ......|...|.++.| +|++. +|++++.||.|++||+.
T Consensus 41 ~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~--~~~~~-~l~s~~~dg~v~iwd~~ 116 (368)
T 3mmy_A 41 SIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTI-PKAQQMHTGPVLDVCW--SDDGS-KVFTASCDKTAKMWDLS 116 (368)
T ss_dssp CEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEE-EEEEEECSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETT
T ss_pred ceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCcee-EEEeccccCCEEEEEE--CcCCC-EEEEEcCCCcEEEEEcC
Confidence 6999999 4 5899999999999999998744322 3556678899999988 99987 69999999999999999
Q ss_pred cceeeEeeeCCCCeeEEEE--CCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-------------------------
Q 013282 266 KYQLSKHFRFPWPVNHSSQ--SPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL------------------------- 318 (446)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------- 318 (446)
+++.+....|..+|.+++| +|++++|++++.|+.|++||+++++.+..+..+.
T Consensus 117 ~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 117 SNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ 196 (368)
T ss_dssp TTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred CCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence 9999888889999999999 8999999999999999999999988776665432
Q ss_pred ----------------CceeEEEECCCCCE----EEEEeCCCcEEEEEccCCC--cceEEEecCCC------------ce
Q 013282 319 ----------------DFSFASAWHPNGVT----FATGNQDKTCRIWDLRNLS--ESVAVLKGNLG------------AI 364 (446)
Q Consensus 319 ----------------~~v~~~~~~p~~~~----l~sgs~d~~v~iwd~~~~~--~~~~~~~~~~~------------~v 364 (446)
..+.++++.+++.. +++|+.|+.|++||++... ..+..+.+|.. +|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccce
Confidence 22334444443333 9999999999999997632 56777888776 79
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 365 RSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 365 ~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
++++|+|++++|++|+.||.|++||+.+++.+..+..|...|.+++|+|+|++|++++.|+....+.
T Consensus 277 ~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred EEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999988665543
No 68
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.3e-31 Score=247.57 Aligned_cols=249 Identities=15% Similarity=0.202 Sum_probs=194.7
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
.+..|...|.+..+++..+.++. ...|+.|++|+........+..+.||.. .|.++
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las--------~s~D~~v~iw~~~~~~~~~~~~l~gH~~----------------~V~~v 59 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMAT--------CSSDKTIKIFEVEGETHKLIDTLTGHEG----------------PVWRV 59 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEE--------EETTSCEEEEEBCSSCBCCCEEECCCSS----------------CEEEE
T ss_pred eccCCcCceEEEEECCCCCEEEE--------EeCCCEEEEEecCCCCcEEEEEEccccC----------------CeEEE
Confidence 34556667777777766554443 3457788999986543333444555432 59999
Q ss_pred Ee----CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCccee
Q 013282 196 AV----KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 196 ~~----~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
+| ++++|++|+.||+|++|++.++.... ......|...|.++.| +|+ +. +|++++.|++|++||+.++..
T Consensus 60 ~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~-~~~~~~h~~~v~~v~~--~p~~~g~-~l~s~s~d~~v~~wd~~~~~~ 135 (297)
T 2pm7_B 60 DWAHPKFGTILASCSYDGKVMIWKEENGRWSQ-IAVHAVHSASVNSVQW--APHEYGP-MLLVASSDGKVSVVEFKENGT 135 (297)
T ss_dssp EECCGGGCSEEEEEETTTEEEEEEBSSSCBCC-CEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTSEEEEEEBCSSSC
T ss_pred EecCCCcCCEEEEEcCCCEEEEEEcCCCceEE-EEEeecCCCceeEEEe--CcCCCCc-EEEEEECCCcEEEEEecCCCc
Confidence 98 27899999999999999998654211 2345578888999988 887 55 799999999999999986532
Q ss_pred --eEeee-CCCCeeEEEECCC-------------CCEEEEEecCCcEEEEECCCCc----eEEEecCCCCceeEEEECCC
Q 013282 270 --SKHFR-FPWPVNHSSQSPD-------------GKLLIIVGDNPDGLLVDSMTGK----TIASLCGHLDFSFASAWHPN 329 (446)
Q Consensus 270 --~~~~~-~~~~v~~~~~sp~-------------~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~p~ 329 (446)
...+. |...|.+++|+|+ +++|++|+.|+.|++||+++++ ....+.+|...|.+++|+|+
T Consensus 136 ~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~ 215 (297)
T 2pm7_B 136 TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPT 215 (297)
T ss_dssp BCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCC
T ss_pred eeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCC
Confidence 23333 8889999999997 5799999999999999998776 56788999999999999998
Q ss_pred C---CEEEEEeCCCcEEEEEccCCCc--ceEEE--ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 013282 330 G---VTFATGNQDKTCRIWDLRNLSE--SVAVL--KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 330 ~---~~l~sgs~d~~v~iwd~~~~~~--~~~~~--~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
+ .+||+|+.|++|+|||++.... ....+ ..|...|.+++|+|+|++||+++.|+.|+||+...
T Consensus 216 ~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 216 VLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp CSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred CCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 4 8999999999999999965322 12233 46788999999999999999999999999999763
No 69
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.6e-31 Score=277.78 Aligned_cols=231 Identities=19% Similarity=0.264 Sum_probs=200.3
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCe--eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGV--SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~--~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
.|+++++ ++++|++|+.||+|++|++..... ..+...+.+|...|.++.+ +|++. +|++|+.||+|++||+.
T Consensus 384 ~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~--s~~g~-~l~sgs~Dg~v~vwd~~ 460 (694)
T 3dm0_A 384 MVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVL--SSDGQ-FALSGSWDGELRLWDLA 460 (694)
T ss_dssp CEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETT
T ss_pred eeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEE--CCCCC-EEEEEeCCCcEEEEECC
Confidence 6999998 357999999999999999976542 2334567789999999988 99988 79999999999999999
Q ss_pred cceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe---cCCCCceeEEEECCCC--CEEEEEeCC
Q 013282 266 KYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL---CGHLDFSFASAWHPNG--VTFATGNQD 339 (446)
Q Consensus 266 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~p~~--~~l~sgs~d 339 (446)
+++.+..+. |...|.+++|+|++++|++++.|++|++||+......... .+|...|.+++|+|++ ..|++|+.|
T Consensus 461 ~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d 540 (694)
T 3dm0_A 461 AGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWD 540 (694)
T ss_dssp TTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred CCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCC
Confidence 999888887 9999999999999999999999999999998765443332 4688999999999986 689999999
Q ss_pred CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEE
Q 013282 340 KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLF 419 (446)
Q Consensus 340 ~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 419 (446)
++|++||++. .+....+.+|.+.|++++|+|+|++|++|+.||.|++||+.+++.+..+. +...|.+++|+|++.+|+
T Consensus 541 ~~v~vwd~~~-~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 541 KTVKVWNLSN-CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp SCEEEEETTT-CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEE
T ss_pred CeEEEEECCC-CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEE
Confidence 9999999976 77888999999999999999999999999999999999999998876654 456899999999988777
Q ss_pred EEEecCCc
Q 013282 420 IGVWDRTY 427 (446)
Q Consensus 420 ~~~~D~~~ 427 (446)
++. ++.+
T Consensus 619 ~~~-~~~i 625 (694)
T 3dm0_A 619 AAT-EHGI 625 (694)
T ss_dssp EEE-TTEE
T ss_pred EEc-CCCE
Confidence 654 4434
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-31 Score=280.15 Aligned_cols=280 Identities=12% Similarity=0.089 Sum_probs=236.5
Q ss_pred eeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEE
Q 013282 115 YEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVST 194 (446)
Q Consensus 115 ~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~ 194 (446)
..|..+...+++..+|++.+.++.+. .++.|.+|+..++.... .+.+|-. +|.+
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~--------~~g~v~iwd~~~~~~~~--~~~~~~~----------------~v~~ 60 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTL--------YSGRVEIWNYETQVEVR--SIQVTET----------------PVRA 60 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEE--------TTSEEEEEETTTTEEEE--EEECCSS----------------CEEE
T ss_pred eeeecCCCceEEEEECCCCCEEEEEe--------CCCEEEEEECCCCceEE--EEecCCC----------------cEEE
Confidence 45677788899999998766665543 45678999988874433 3333322 5888
Q ss_pred EEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-eeeE
Q 013282 195 LAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSK 271 (446)
Q Consensus 195 l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-~~~~ 271 (446)
++| ++++|++|+.+|.|++|++.++... ..+..|...|.++.| +|++. .|++++.||.|++|++.++ ....
T Consensus 61 ~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~---~~~~~~~~~v~~~~~--s~~~~-~l~~~~~dg~i~vw~~~~~~~~~~ 134 (814)
T 3mkq_A 61 GKFIARKNWIIVGSDDFRIRVFNYNTGEKV---VDFEAHPDYIRSIAV--HPTKP-YVLSGSDDLTVKLWNWENNWALEQ 134 (814)
T ss_dssp EEEEGGGTEEEEEETTSEEEEEETTTCCEE---EEEECCSSCEEEEEE--CSSSS-EEEEEETTSEEEEEEGGGTSEEEE
T ss_pred EEEeCCCCEEEEEeCCCeEEEEECCCCcEE---EEEecCCCCEEEEEE--eCCCC-EEEEEcCCCEEEEEECCCCceEEE
Confidence 888 8999999999999999999877543 455678888999888 99998 6889999999999999886 6666
Q ss_pred eee-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEecCCC-CceeEEEECC--CCCEEEEEeCCCcEEEEE
Q 013282 272 HFR-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-DFSFASAWHP--NGVTFATGNQDKTCRIWD 346 (446)
Q Consensus 272 ~~~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~p--~~~~l~sgs~d~~v~iwd 346 (446)
.+. |..+|.+++|+| +++.|++++.++.|++||+.+++....+..+. ..+.+++|+| ++.+|++|+.||+|++||
T Consensus 135 ~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d 214 (814)
T 3mkq_A 135 TFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWD 214 (814)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEE
T ss_pred EEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 666 889999999999 88999999999999999999888877777554 8899999999 999999999999999999
Q ss_pred ccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcE-EEEEecC
Q 013282 347 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL-FIGVWDR 425 (446)
Q Consensus 347 ~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l-~~~~~D~ 425 (446)
++. +.++..+.+|...|++++|+|+|++|++++.||.|++||+.++.....+..|...+.+++|+|+|..+ ++++.++
T Consensus 215 ~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 293 (814)
T 3mkq_A 215 YQT-KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDN 293 (814)
T ss_dssp TTT-TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETT
T ss_pred CCC-CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCC
Confidence 976 78889999999999999999999999999999999999999999998888899999999999998742 4444454
Q ss_pred Cc
Q 013282 426 TY 427 (446)
Q Consensus 426 ~~ 427 (446)
.+
T Consensus 294 ~~ 295 (814)
T 3mkq_A 294 GF 295 (814)
T ss_dssp EE
T ss_pred CE
Confidence 43
No 71
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.2e-31 Score=261.26 Aligned_cols=256 Identities=16% Similarity=0.221 Sum_probs=218.9
Q ss_pred ccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCC
Q 013282 141 SKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 141 ~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
+...+....++.|.+|+..+++.. ..+.+|.. .|.++++++++|++|+.||+|++|++.++.
T Consensus 143 ~~~l~~g~~dg~i~iwd~~~~~~~--~~~~~h~~----------------~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~ 204 (435)
T 1p22_A 143 DQKIVSGLRDNTIKIWDKNTLECK--RILTGHTG----------------SVLCLQYDERVIITGSSDSTVRVWDVNTGE 204 (435)
T ss_dssp SSEEEEEESSSCEEEEESSSCCEE--EEECCCSS----------------CEEEEECCSSEEEEEETTSCEEEEESSSCC
T ss_pred CCEEEEEeCCCeEEEEeCCCCeEE--EEEcCCCC----------------cEEEEEECCCEEEEEcCCCeEEEEECCCCc
Confidence 444555567889999999877543 33444422 599999999999999999999999998875
Q ss_pred eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee---Eeee-CCCCeeEEEECCCCCEEEEEec
Q 013282 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS---KHFR-FPWPVNHSSQSPDGKLLIIVGD 296 (446)
Q Consensus 221 ~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~---~~~~-~~~~v~~~~~sp~~~~l~~~~~ 296 (446)
. ...+..|...|.++.+ ++ . .+++|+.||.|++||+.+++.. ..+. |...|.+++| +++++++|+.
T Consensus 205 ~---~~~~~~h~~~v~~l~~--~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~ 274 (435)
T 1p22_A 205 M---LNTLIHHCEAVLHLRF--NN--G-MMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASG 274 (435)
T ss_dssp E---EEEECCCCSCEEEEEC--CT--T-EEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEET
T ss_pred E---EEEEcCCCCcEEEEEE--cC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeC
Confidence 4 3556678888888876 43 3 7999999999999999887654 3333 8889999999 7899999999
Q ss_pred CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEE
Q 013282 297 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM 376 (446)
Q Consensus 297 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l 376 (446)
|+.|++||+++++.+..+.+|...|.+++| ++.++++|+.||+|++||+++ +.++..+.+|...|.+++| ++.+|
T Consensus 275 dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~-~~~~~~~~~h~~~v~~~~~--~~~~l 349 (435)
T 1p22_A 275 DRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIEC-GACLRVLEGHEELVRCIRF--DNKRI 349 (435)
T ss_dssp TSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTT-CCEEEEECCCSSCEEEEEC--CSSEE
T ss_pred CCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCC-CCEEEEEeCCcCcEEEEEe--cCCEE
Confidence 999999999999999999999999999999 467999999999999999976 7889999999999999999 78899
Q ss_pred EEEeCCCeEEEEEcCCCe---------eEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceEE
Q 013282 377 ATAEPADFVHVYDVKSGY---------EKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 377 ~~~~~dg~i~iwd~~~~~---------~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
++|+.||.|++||+.++. .+..+.+|.+.|.+++| ++.+|++|+.|+++..|-
T Consensus 350 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 350 VSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp EEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred EEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 999999999999997765 67788889999999999 688999999999987763
No 72
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-30 Score=255.74 Aligned_cols=253 Identities=18% Similarity=0.236 Sum_probs=218.0
Q ss_pred cCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCCe
Q 013282 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGV 221 (446)
Q Consensus 142 ~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~ 221 (446)
...+....++.|.+|+..+++. +..+.+|.. .|.+++++++.|++|+.||.|++|++.+...
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~~~--~~~~~~h~~----------------~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETGEC--IHTLYGHTS----------------TVRCMHLHEKRVVSGSRDATLRVWDIETGQC 231 (445)
T ss_dssp TEEEEEETTSCEEEEETTTTEE--EEEECCCSS----------------CEEEEEEETTEEEEEETTSEEEEEESSSCCE
T ss_pred CEEEEEeCCCeEEEEECCcCcE--EEEECCCCC----------------cEEEEEecCCEEEEEeCCCEEEEEECCCCcE
Confidence 3445556688999999988743 334444322 5999999999999999999999999987754
Q ss_pred eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcE
Q 013282 222 SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDG 300 (446)
Q Consensus 222 ~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i 300 (446)
. .....|...+.++.+ ++. .+++++.||.|++||+.+++++..+. |...|.++.| ++..+++++.|+.|
T Consensus 232 ~---~~~~~~~~~v~~~~~----~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i 301 (445)
T 2ovr_B 232 L---HVLMGHVAAVRCVQY----DGR-RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSI 301 (445)
T ss_dssp E---EEEECCSSCEEEEEE----CSS-CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCE
T ss_pred E---EEEcCCcccEEEEEE----CCC-EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeE
Confidence 3 455678888988876 444 69999999999999999999998888 8889999999 78999999999999
Q ss_pred EEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEE
Q 013282 301 LLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMA 377 (446)
Q Consensus 301 ~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~ 377 (446)
++||+++++.+..+.+|...+.++++ +++++++|+.||.|++||+++ ++++..+.+ |..+|++++|+ +++|+
T Consensus 302 ~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~vwd~~~-~~~~~~~~~~~~~~~~v~~~~~~--~~~l~ 376 (445)
T 2ovr_B 302 RVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADSTVKIWDIKT-GQCLQTLQGPNKHQSAVTCLQFN--KNFVI 376 (445)
T ss_dssp EEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSCEEEEETTT-CCEEEEECSTTSCSSCEEEEEEC--SSEEE
T ss_pred EEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCeEEEEECCC-CcEEEEEccCCCCCCCEEEEEEC--CCEEE
Confidence 99999999999999999999998887 467999999999999999976 778888876 88899999996 57999
Q ss_pred EEeCCCeEEEEEcCCCeeEeEe-----eccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 378 TAEPADFVHVYDVKSGYEKEQE-----IDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 378 ~~~~dg~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
+|+.||.|++||+.+++.+..+ ..|.+.|.+++|+|++.+|++|+.||+.
T Consensus 377 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~ 431 (445)
T 2ovr_B 377 TSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTE 431 (445)
T ss_dssp EEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSS
T ss_pred EEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCC
Confidence 9999999999999999888777 3577899999999999999999999973
No 73
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=275.08 Aligned_cols=229 Identities=7% Similarity=-0.045 Sum_probs=184.1
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeee-EEEEeecCCCceeeEEEEeCCCC-----CeEEEEEeCCCcEEEEecCccee--
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSF-CSRTTYDDNAITNAVEIYGSPSG-----AVHFTASNNDCGVRDFDMGKYQL-- 269 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~-~~~~~~~~~~~v~~i~~~~s~~~-----~~~l~s~s~dg~v~iwd~~~~~~-- 269 (446)
+++.|++|+.||+|+||++....... ....+.+|.+.|..+.| +|++ ..+|++++.||+|++||+.++..
T Consensus 172 ~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~w--sp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~ 249 (524)
T 2j04_B 172 HLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKW--HEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDV 249 (524)
T ss_dssp ----------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEE--CSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSS
T ss_pred hhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEE--CCCCCCCCCCceEEEEecCCeEEEEEcCCCcccc
Confidence 45678899999999999997765322 12334567788888887 8761 23799999999999999976532
Q ss_pred ---------eEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC-ceEEEecCCCCceeEE--EECCCC-CEEEE
Q 013282 270 ---------SKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCGHLDFSFAS--AWHPNG-VTFAT 335 (446)
Q Consensus 270 ---------~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~--~~~p~~-~~l~s 335 (446)
...+. |...|.+++|+|+ ..|++|+.||+|++||++++ .+...+.+|...|.++ +|+|+| .+|||
T Consensus 250 ~~~~~~~~p~~~l~~h~~~v~sv~~s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS 328 (524)
T 2j04_B 250 HVFKMCEKPSLTLSLADSLITTFDFLSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVST 328 (524)
T ss_dssp SEEECCCSCSEEECCTTTCEEEEEESSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEE
T ss_pred ccceeecCceEEEEcCCCCEEEEEecCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEE
Confidence 12344 7889999999986 48999999999999999976 4456688999999999 578888 89999
Q ss_pred EeCCCcEEEEEccCCCcceEEEecCCC--ceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcC
Q 013282 336 GNQDKTCRIWDLRNLSESVAVLKGNLG--AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSP 413 (446)
Q Consensus 336 gs~d~~v~iwd~~~~~~~~~~~~~~~~--~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp 413 (446)
|+.|++|+|||+++ .+++..+.+|.. .|.+++|+|+++.|++++.|++|++||++++.++..+.+|.+.|.+++|+|
T Consensus 329 ~S~D~tvklWD~~~-~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp 407 (524)
T 2j04_B 329 VAVDGYFYIFNPKD-IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSR 407 (524)
T ss_dssp EETTSEEEEECGGG-HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCS
T ss_pred eccCCeEEEEECCC-CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCC
Confidence 99999999999986 666667777653 588999999999999999999999999999988888889999999999999
Q ss_pred CCCcEEEEEecCCcceE
Q 013282 414 DTESLFIGVWDRTYGSL 430 (446)
Q Consensus 414 dg~~l~~~~~D~~~~~~ 430 (446)
+|++|++|+.|+++..|
T Consensus 408 ~g~~l~Sgs~Dgtv~lw 424 (524)
T 2j04_B 408 LHPMVLAGSADGSLIIT 424 (524)
T ss_dssp SCCBCEEEETTTEEECC
T ss_pred CCCeEEEEECCCEEEEE
Confidence 99999999999998754
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=7.2e-32 Score=261.84 Aligned_cols=228 Identities=13% Similarity=0.168 Sum_probs=195.0
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCee----eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEe
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVS----FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFD 263 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~----~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd 263 (446)
.|.+++| ++++|++|+.||.|++|++...... .....+.+|...|.++.+ +|++..+|++++.||.|++||
T Consensus 83 ~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 83 PVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAW--HPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp CEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEE--CSSBTTEEEEEETTSCEEEEE
T ss_pred CEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEE--CcCCCCEEEEEcCCCEEEEEE
Confidence 6999998 6789999999999999999876421 123455688899999988 999865899999999999999
Q ss_pred cCcceeeEee--e-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe-cCCCCc-eeEEEECCCCCEEEEE--
Q 013282 264 MGKYQLSKHF--R-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CGHLDF-SFASAWHPNGVTFATG-- 336 (446)
Q Consensus 264 ~~~~~~~~~~--~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~-v~~~~~~p~~~~l~sg-- 336 (446)
+.+++.+..+ . |...|.+++|+|++++|++++.|+.|++||+++++.+..+ .+|.+. +.+++|+|++++|++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~ 240 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFS 240 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEEC
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEecc
Confidence 9999999888 4 8899999999999999999999999999999999999998 788776 8999999999999999
Q ss_pred -eCCCcEEEEEccCCCcceEEEe-cCCCceEEEEEccCCCEEEE-EeCCCeEEEEEcCCCee-EeEeec--cccCeEEEE
Q 013282 337 -NQDKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYTSDGRYMAT-AEPADFVHVYDVKSGYE-KEQEID--FFGEISGIS 410 (446)
Q Consensus 337 -s~d~~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~s~dg~~l~~-~~~dg~i~iwd~~~~~~-~~~~~~--~~~~v~~~~ 410 (446)
+.|+.|++||++....++.... .|...+.+++|+|++++|++ |+.||.|++||+.++.. +..+.. |...|.+++
T Consensus 241 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~ 320 (402)
T 2aq5_A 241 RMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMG 320 (402)
T ss_dssp TTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEE
T ss_pred CCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceE
Confidence 7899999999987555454444 56778999999999999975 55799999999998863 444443 458999999
Q ss_pred EcCCCCcEEE
Q 013282 411 FSPDTESLFI 420 (446)
Q Consensus 411 ~spdg~~l~~ 420 (446)
|+|++.++++
T Consensus 321 ~sp~~~~~~s 330 (402)
T 2aq5_A 321 YMPKRGLEVN 330 (402)
T ss_dssp ECCGGGSCGG
T ss_pred Eeccccccee
Confidence 9999998764
No 75
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=261.73 Aligned_cols=286 Identities=8% Similarity=0.057 Sum_probs=211.6
Q ss_pred ccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc---------eEEEecCCCCCCCCCCCCCccccCccceE
Q 013282 122 RSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR---------SQVLNVSGHVAPSEKHPGSLLEGFTQTQV 192 (446)
Q Consensus 122 ~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~---------~~~~~~~g~~~~~~~~~g~~~~~~~~~~v 192 (446)
..|.++.+++..+.++. ...++.|.+|+..++.. .....+.+|..... .+..-.....|
T Consensus 29 ~~V~~v~~s~~g~~la~--------g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~----~~~~~~~~~~V 96 (447)
T 3dw8_B 29 DIISTVEFNHSGELLAT--------GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFD----YLKSLEIEEKI 96 (447)
T ss_dssp GSEEEEEECSSSSEEEE--------EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEE----GGGTEEECCCC
T ss_pred CcEEEEEECCCCCEEEE--------EcCCCeEEEEEecCCCCCCcccccceeEeccccccccccc----ccccccccCce
Confidence 35666666665444433 34567889999876642 12333444420000 00000000258
Q ss_pred EEEEe--CC--cEEEEeccCCcEEEEEcCCCCee------------------------------------e-EEEEeecC
Q 013282 193 STLAV--KD--KLLVAGGFQGELICKHLDRPGVS------------------------------------F-CSRTTYDD 231 (446)
Q Consensus 193 ~~l~~--~~--~~l~tg~~dg~i~vw~~~~~~~~------------------------------------~-~~~~~~~~ 231 (446)
.+++| ++ .+|++|+.||.|++|++...... . ......+|
T Consensus 97 ~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h 176 (447)
T 3dw8_B 97 NKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAH 176 (447)
T ss_dssp CEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCC
T ss_pred EEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCC
Confidence 88888 55 79999999999999998653221 0 01223578
Q ss_pred CCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC-cceeeEee--------eCCCCeeEEEECCCC-CEEEEEecCCcEE
Q 013282 232 NAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKHF--------RFPWPVNHSSQSPDG-KLLIIVGDNPDGL 301 (446)
Q Consensus 232 ~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~--------~~~~~v~~~~~sp~~-~~l~~~~~d~~i~ 301 (446)
...|.++.+ +|++. +|++| .|+.|++||+. .++.+..+ .|...|.+++|+|++ ++|++|+.|+.|+
T Consensus 177 ~~~v~~~~~--~~~~~-~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~ 252 (447)
T 3dw8_B 177 TYHINSISI--NSDYE-TYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIR 252 (447)
T ss_dssp SSCCCEEEE--CTTSS-EEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEE
T ss_pred CcceEEEEE--cCCCC-EEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEE
Confidence 888999988 99987 68887 79999999998 45555432 378899999999998 9999999999999
Q ss_pred EEECCCCce----EEEecCCCC------------ceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCc--
Q 013282 302 LVDSMTGKT----IASLCGHLD------------FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGA-- 363 (446)
Q Consensus 302 i~d~~~~~~----~~~~~~~~~------------~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~-- 363 (446)
+||+++++. +..+.+|.. .|.+++|+|+|++|++++. ++|++||++..++++..+.+|...
T Consensus 253 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~ 331 (447)
T 3dw8_B 253 LCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRS 331 (447)
T ss_dssp EEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTT
T ss_pred EEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccc
Confidence 999999887 788888876 8999999999999999999 999999997657888888888642
Q ss_pred -------------eEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEee------------------------------
Q 013282 364 -------------IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI------------------------------ 400 (446)
Q Consensus 364 -------------v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~------------------------------ 400 (446)
+..++|+|+|++|++|+.||.|++||+.+++.+. +.
T Consensus 332 ~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 410 (447)
T 3dw8_B 332 KLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRTVLKPRKVCASGKRKKDEISV 410 (447)
T ss_dssp THHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTCBCCCCCEECSSCCCTTCEEG
T ss_pred cccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeecccccccccccCCccccccCCcccccccc
Confidence 2249999999999999999999999999886542 22
Q ss_pred ---ccccCeEEEEEcCCCCcEEEEEecC
Q 013282 401 ---DFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 401 ---~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.+...|..++|+|++.+|++++.++
T Consensus 411 ~~~~~~~~i~~~~~~p~~~~la~~~~~~ 438 (447)
T 3dw8_B 411 DSLDFNKKILHTAWHPKENIIAVATTNN 438 (447)
T ss_dssp GGCCTTSCCCEEEECSSSSEEEEECSSC
T ss_pred cccccCCceeEEEECCCCCEEEEEecce
Confidence 2345688999999999999998774
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.6e-32 Score=260.61 Aligned_cols=235 Identities=13% Similarity=0.115 Sum_probs=203.8
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCe---eeEEEEeecCCCceeeEEEEeCCC----C---CeEEEEEeCCCcEE
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGV---SFCSRTTYDDNAITNAVEIYGSPS----G---AVHFTASNNDCGVR 260 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~---~~~~~~~~~~~~~v~~i~~~~s~~----~---~~~l~s~s~dg~v~ 260 (446)
.|.+++|..++|++|+.||.|++|++..... ......+..|...|.++.| +|+ + . +|++++.||.|+
T Consensus 18 ~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~--~~~~~~~g~~~~-~l~s~~~dg~i~ 94 (397)
T 1sq9_A 18 DIFSVSACNSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDV--LQAIERDAFELC-LVATTSFSGDLL 94 (397)
T ss_dssp CEEEEEECSSEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEE--EEEEETTTEEEE-EEEEEETTSCEE
T ss_pred CeEEEEecCCeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEE--ecccccCCcccc-EEEEEcCCCCEE
Confidence 6999999779999999999999999988760 0113445578888999988 777 6 5 799999999999
Q ss_pred EEecCccee-----eEeee-C-----CCCeeEEEEC----CCCCE-EEEEecCCcEEEEECCC------CceEE-----E
Q 013282 261 DFDMGKYQL-----SKHFR-F-----PWPVNHSSQS----PDGKL-LIIVGDNPDGLLVDSMT------GKTIA-----S 313 (446)
Q Consensus 261 iwd~~~~~~-----~~~~~-~-----~~~v~~~~~s----p~~~~-l~~~~~d~~i~i~d~~~------~~~~~-----~ 313 (446)
+|++.+++. ...+. + ...|.+++|+ |++++ |++++.++.|++||+++ ++.+. .
T Consensus 95 iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 174 (397)
T 1sq9_A 95 FYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLE 174 (397)
T ss_dssp EEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEE
T ss_pred EEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcce
Confidence 999988875 66666 5 4899999999 99999 99999999999999998 66666 6
Q ss_pred e-------cCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec---C---CCceEEEEEccCCCEEEEEe
Q 013282 314 L-------CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG---N---LGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 314 ~-------~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~---~---~~~v~~l~~s~dg~~l~~~~ 380 (446)
+ ..|...|.+++|+|++ +|++|+.|+.|++||++. .+++..+.. | ...|.+++|+|++++|++++
T Consensus 175 ~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~ 252 (397)
T 1sq9_A 175 LQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELST-LRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH 252 (397)
T ss_dssp EEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTT-TEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE
T ss_pred eeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCC-CceeEEEeccccccccCCccceEEECCCCCEEEEEe
Confidence 6 4488999999999999 999999999999999976 788888988 8 99999999999999999999
Q ss_pred CC---CeEEEEEcCCCeeEeEeec-------------cccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 381 PA---DFVHVYDVKSGYEKEQEID-------------FFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 381 ~d---g~i~iwd~~~~~~~~~~~~-------------~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.| +.|++||+++++.+..+.. |...|.+++|+|++++|++++.|+.+..|
T Consensus 253 ~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iw 318 (397)
T 1sq9_A 253 DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFW 318 (397)
T ss_dssp EETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEE
T ss_pred cCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 99 9999999999998888888 99999999999999999999999876544
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.2e-31 Score=251.66 Aligned_cols=245 Identities=17% Similarity=0.148 Sum_probs=193.1
Q ss_pred eccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe-
Q 013282 119 RNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV- 197 (446)
Q Consensus 119 ~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~- 197 (446)
.|...|.++.+++..+.++. ...|+.|++|+..++....+..+.||.. .|.+++|
T Consensus 11 ~H~~~V~~v~~s~~g~~las--------gs~D~~v~lwd~~~~~~~~~~~l~gH~~----------------~V~~v~~~ 66 (316)
T 3bg1_A 11 SHEDMIHDAQMDYYGTRLAT--------CSSDRSVKIFDVRNGGQILIADLRGHEG----------------PVWQVAWA 66 (316)
T ss_dssp ---CCEEEEEECGGGCEEEE--------EETTTEEEEEEEETTEEEEEEEEECCSS----------------CEEEEEEC
T ss_pred cccCeEEEeeEcCCCCEEEE--------EeCCCeEEEEEecCCCcEEEEEEcCCCc----------------cEEEEEeC
Confidence 44556777777665544433 3457788999987765444555666543 5999998
Q ss_pred ---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCccee---
Q 013282 198 ---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQL--- 269 (446)
Q Consensus 198 ---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~~~~--- 269 (446)
++++|++|+.||+|++|++.+.... +...+.+|...|.++.| +|+ +. +|++|+.|++|++|++.++..
T Consensus 67 ~~~~~~~l~s~s~D~~v~iWd~~~~~~~-~~~~~~~h~~~V~~v~~--~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 67 HPMYGNILASCSYDRKVIIWREENGTWE-KSHEHAGHDSSVNSVCW--APHDYGL-ILACGSSDGAISLLTYTGEGQWEV 142 (316)
T ss_dssp CGGGSSCEEEEETTSCEEEECCSSSCCC-EEEEECCCSSCCCEEEE--CCTTTCS-CEEEECSSSCEEEEEECSSSCEEE
T ss_pred CCCCCCEEEEEECCCEEEEEECCCCcce-EEEEccCCCCceEEEEE--CCCCCCc-EEEEEcCCCCEEEEecCCCCCcce
Confidence 2789999999999999999865422 23455678889999988 887 54 799999999999999987532
Q ss_pred eEeee-CCCCeeEEEECCC-----------------CCEEEEEecCCcEEEEECCCC---ceEEEecCCCCceeEEEECC
Q 013282 270 SKHFR-FPWPVNHSSQSPD-----------------GKLLIIVGDNPDGLLVDSMTG---KTIASLCGHLDFSFASAWHP 328 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~-----------------~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~p 328 (446)
...+. |...|.+++|+|+ +++|++|+.|+.|++||++.+ +++..+.+|...|.+++|+|
T Consensus 143 ~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp 222 (316)
T 3bg1_A 143 KKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAP 222 (316)
T ss_dssp CCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCC
T ss_pred eeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecC
Confidence 23333 7788999999997 478999999999999999755 46778889999999999999
Q ss_pred CC----CEEEEEeCCCcEEEEEccCCC---cceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 329 NG----VTFATGNQDKTCRIWDLRNLS---ESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 329 ~~----~~l~sgs~d~~v~iwd~~~~~---~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
++ .+|++|+.|++|+||+++... .....+..|...|.+++|+|+|++||+|+.|+.|+||+..
T Consensus 223 ~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 223 SIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred CCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 86 899999999999999996521 1234567788999999999999999999999999999975
No 78
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-31 Score=261.38 Aligned_cols=239 Identities=15% Similarity=0.172 Sum_probs=202.5
Q ss_pred eEEEEEe--C-CcEEEEeccCCcEEEEEcCCC-------CeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEE
Q 013282 191 QVSTLAV--K-DKLLVAGGFQGELICKHLDRP-------GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (446)
Q Consensus 191 ~v~~l~~--~-~~~l~tg~~dg~i~vw~~~~~-------~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~ 260 (446)
.|.++++ + +.+|++|+.+|.|++|++... +.......+..|...+.++.+ +|++..+|++|+.||.|+
T Consensus 130 ~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~dg~i~ 207 (430)
T 2xyi_A 130 EVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSW--NPNLNGYLLSASDDHTIC 207 (430)
T ss_dssp CCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEE--CTTSTTEEEEECTTSCEE
T ss_pred cEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEe--CCCCCCeEEEEeCCCeEE
Confidence 5778888 3 679999999999999999762 111223455678888999988 898876799999999999
Q ss_pred EEecCccee-------eEeee-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCC---ceEEEecCCCCceeEEEECC
Q 013282 261 DFDMGKYQL-------SKHFR-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTG---KTIASLCGHLDFSFASAWHP 328 (446)
Q Consensus 261 iwd~~~~~~-------~~~~~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~v~~~~~~p 328 (446)
+|++.++.. ...+. |...|.+++|+| ++.+|++++.++.|++||++++ +.+..+..|...|.+++|+|
T Consensus 208 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p 287 (430)
T 2xyi_A 208 LWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNP 287 (430)
T ss_dssp EEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECS
T ss_pred EEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCC
Confidence 999987321 23343 888999999999 7889999999999999999977 57778889999999999999
Q ss_pred CCC-EEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCC-EEEEEeCCCeEEEEEcCC--------------
Q 013282 329 NGV-TFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKS-------------- 392 (446)
Q Consensus 329 ~~~-~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~~dg~i~iwd~~~-------------- 392 (446)
++. +|++|+.||+|++||++....++..+.+|...|++++|+|+++ +|++++.|+.|+|||+..
T Consensus 288 ~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 367 (430)
T 2xyi_A 288 YSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGP 367 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCC
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCC
Confidence 886 7999999999999999886788999999999999999999995 799999999999999987
Q ss_pred CeeEeEeeccccCeEEEEEcCCCC-cEEEEEecCCcceEE
Q 013282 393 GYEKEQEIDFFGEISGISFSPDTE-SLFIGVWDRTYGSLL 431 (446)
Q Consensus 393 ~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~D~~~~~~l 431 (446)
...+....+|...|.+++|+|+++ +|++++.|+.+..|-
T Consensus 368 ~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 368 PELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp TTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred cceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 345666777889999999999999 788888888776653
No 79
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1e-31 Score=263.59 Aligned_cols=228 Identities=16% Similarity=0.162 Sum_probs=187.5
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.|+||+| ++++||+|+.||.|+||++....... .....+|.+.|+++.| +|.+..+|++|+.||+|++||+.++
T Consensus 121 ~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~-~~~~~gH~~~V~~l~f--~p~~~~~l~s~s~D~~v~iwd~~~~ 197 (435)
T 4e54_B 121 RATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT-FIKGIGAGGSITGLKF--NPLNTNQFYASSMEGTTRLQDFKGN 197 (435)
T ss_dssp CEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE-EECCCSSSCCCCEEEE--CSSCTTEEEEECSSSCEEEEETTSC
T ss_pred CEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee-EEEccCCCCCEEEEEE--eCCCCCEEEEEeCCCEEEEeeccCC
Confidence 6999999 56799999999999999998765432 3445678999999988 8854447999999999999999876
Q ss_pred eeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCC-EEEEEeCCCcEE
Q 013282 268 QLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGV-TFATGNQDKTCR 343 (446)
Q Consensus 268 ~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~sgs~d~~v~ 343 (446)
....... +...+.+++|+|++++|++|+.+|.|++||++ ++.+..+.+|...|.+++|+|++. +|++|+.|++|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~ 276 (435)
T 4e54_B 198 ILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVK 276 (435)
T ss_dssp EEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCC
T ss_pred ceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceee
Confidence 5544433 34467899999999999999999999999986 456778889999999999999875 788999999999
Q ss_pred EEEccCCCc--ceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc------CeEEEEEcCCC
Q 013282 344 IWDLRNLSE--SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG------EISGISFSPDT 415 (446)
Q Consensus 344 iwd~~~~~~--~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~------~v~~~~~spdg 415 (446)
|||++.... .+....+|..+|++++|+|+|++|++++.||.|+|||+.++.....+..|.. .+..+.|+|++
T Consensus 277 iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (435)
T 4e54_B 277 IWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRY 356 (435)
T ss_dssp EEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSS
T ss_pred EEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCC
Confidence 999976332 2233457899999999999999999999999999999999887777766542 23456788888
Q ss_pred CcEEEEE
Q 013282 416 ESLFIGV 422 (446)
Q Consensus 416 ~~l~~~~ 422 (446)
..+++++
T Consensus 357 ~~~~~~~ 363 (435)
T 4e54_B 357 NLIVVGR 363 (435)
T ss_dssp SCEEEEC
T ss_pred CEEEEEE
Confidence 8877764
No 80
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=4.1e-30 Score=242.81 Aligned_cols=255 Identities=16% Similarity=0.187 Sum_probs=208.7
Q ss_pred EEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--C-CcEEEEeccCCcEEEEEcCCCCe--eeEEEEe
Q 013282 154 IHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K-DKLLVAGGFQGELICKHLDRPGV--SFCSRTT 228 (446)
Q Consensus 154 ~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~-~~~l~tg~~dg~i~vw~~~~~~~--~~~~~~~ 228 (446)
..+...+.+......+.||.. .|++++| + +++||||+.||+|+||++..... ..+...+
T Consensus 19 ~~~~~~~~~~~l~~tL~GH~~----------------~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l 82 (340)
T 4aow_A 19 YFQSMMTEQMTLRGTLKGHNG----------------WVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRAL 82 (340)
T ss_dssp -------CEEEEEEEECCCSS----------------CEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEE
T ss_pred EEEEccCCceEEEEEECCccC----------------CEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEE
Confidence 334444444344445677644 5999999 3 68999999999999999976542 2345667
Q ss_pred ecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC
Q 013282 229 YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT 307 (446)
Q Consensus 229 ~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~ 307 (446)
.+|...|.++.| +|++. +|++++.|+.|++|+........... +...+..+.++|+++.|++++.|+.+++||+..
T Consensus 83 ~~h~~~V~~~~~--s~dg~-~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~ 159 (340)
T 4aow_A 83 RGHSHFVSDVVI--SSDGQ-FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG 159 (340)
T ss_dssp CCCSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS
T ss_pred eCCCCCEEEEEE--CCCCC-EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCC
Confidence 789999999988 99988 69999999999999999888777766 777889999999999999999999999999986
Q ss_pred Cce-EEEecCCCCceeEEEECCCC--CEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCe
Q 013282 308 GKT-IASLCGHLDFSFASAWHPNG--VTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 384 (446)
Q Consensus 308 ~~~-~~~~~~~~~~v~~~~~~p~~--~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~ 384 (446)
... ...+.+|...+..++|++++ .++++++.|++|++||++. .+.+..+.+|.++|++++|+|++++|++|+.|+.
T Consensus 160 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~-~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~ 238 (340)
T 4aow_A 160 VCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLAN-CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ 238 (340)
T ss_dssp CEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCC-CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe
Confidence 654 34456799999999999854 6789999999999999976 7888999999999999999999999999999999
Q ss_pred EEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 385 VHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 385 i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
|++||+++++.+..+. +...|..+.|+|++. +++++.|+.+..|
T Consensus 239 i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~-~~~~~~d~~i~iw 282 (340)
T 4aow_A 239 AMLWDLNEGKHLYTLD-GGDIINALCFSPNRY-WLCAATGPSIKIW 282 (340)
T ss_dssp EEEEETTTTEEEEEEE-CSSCEEEEEECSSSS-EEEEEETTEEEEE
T ss_pred EEEEEeccCceeeeec-CCceEEeeecCCCCc-eeeccCCCEEEEE
Confidence 9999999998887766 456899999999875 5566678776543
No 81
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-31 Score=251.69 Aligned_cols=262 Identities=10% Similarity=-0.028 Sum_probs=199.4
Q ss_pred cCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCC-
Q 013282 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG- 220 (446)
Q Consensus 142 ~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~- 220 (446)
...+....|+.|++|+..+++....+... .|.++.+... +++|+.|++|++|+.....
T Consensus 49 ~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~--------------------~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~ 107 (343)
T 3lrv_A 49 WVCMCRCEDGALHFTQLKDSKTITTITTP--------------------NPRTGGEHPA-IISRGPCNRLLLLYPGNQIT 107 (343)
T ss_dssp EEEEEEEETTEEEEEEESSSSCEEEEEEE--------------------CCCTTCCCCS-EEEECSTTEEEEEETTTEEE
T ss_pred CEEEEECCCCcEEEEECCCCcEEEEEecC--------------------CceeeeeCCc-eEEecCCCeEEEEEccCceE
Confidence 33455566889999999888765544411 3444455333 9999999999999765321
Q ss_pred ------eeeEEEEeecCCCceeeEEEEeCC--CCCeEEEEEeCCCcEEEEecCcceeeEeee--CCCCeeEEEECCCCCE
Q 013282 221 ------VSFCSRTTYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNHSSQSPDGKL 290 (446)
Q Consensus 221 ------~~~~~~~~~~~~~~v~~i~~~~s~--~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~ 290 (446)
..........|...|.++.+ +| ++. +|++++.||+|++||+.+++++..+. +...+.+++|+|++.+
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 108 ILDSKTNKVLREIEVDSANEIIYMYG--HNEVNTE-YFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EEETTTCCEEEEEECCCSSCEEEEEC--CC---CC-EEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCE
T ss_pred EeecCCcceeEEeecCCCCCEEEEEc--CCCCCCC-EEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCE
Confidence 11112333356677888877 89 887 69999999999999999998876664 5667999999999999
Q ss_pred EEEEecCCcEEEEECCCCceE-EEecC-CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec---CCCceE
Q 013282 291 LIIVGDNPDGLLVDSMTGKTI-ASLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG---NLGAIR 365 (446)
Q Consensus 291 l~~~~~d~~i~i~d~~~~~~~-~~~~~-~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~---~~~~v~ 365 (446)
|++|+.|+.|++||+++++.+ ..+.+ |.++|.+++|+|+|.+|++++ +++|++||++. ...+..+.. |...+.
T Consensus 185 lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~-~~~~~~~~~~~~~~~~~~ 262 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRK-DVGTLAYPTYTIPEFKTG 262 (343)
T ss_dssp EEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTS-STTCBSSCCCBC-----C
T ss_pred EEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCC-CCcceeeccccccccccc
Confidence 999999999999999999887 78888 999999999999999999999 55999999987 444443332 334444
Q ss_pred --EEEEccCCCEEEEEeC-CCeEEEEEcCCCeeEeEeeccccCeEEEEEcC---CCCcEEEEEecCCcceEEEE
Q 013282 366 --SIRYTSDGRYMATAEP-ADFVHVYDVKSGYEKEQEIDFFGEISGISFSP---DTESLFIGVWDRTYGSLLEY 433 (446)
Q Consensus 366 --~l~~s~dg~~l~~~~~-dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~sp---dg~~l~~~~~D~~~~~~l~~ 433 (446)
+++|+|+|++|++++. ++.|+||++.+....... .++..+.|+| ++..|++++.|+.+..++..
T Consensus 263 ~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~~~~ 332 (343)
T 3lrv_A 263 TVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----DEESALCLQSDTADFTDMDVVCGDGGIAAILKT 332 (343)
T ss_dssp CEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----EEEEECCC----CCCCEEEEEEETTEEEEEEEC
T ss_pred ceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----cCceeEecCccccccceeEEEecCCceEEEEec
Confidence 6999999999999998 999999999765433332 5677888998 88999999999988766544
No 82
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=2e-31 Score=261.78 Aligned_cols=235 Identities=17% Similarity=0.230 Sum_probs=193.4
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCe--------eeEEEEeecCC------------CceeeEEEEeCCCCC-
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGV--------SFCSRTTYDDN------------AITNAVEIYGSPSGA- 247 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~--------~~~~~~~~~~~------------~~v~~i~~~~s~~~~- 247 (446)
.|++++| ++++||+|+.||.|+||++..... ..+...+.+|. ..|.++.| +|++.
T Consensus 30 ~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~--~~~~~~ 107 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW--LPQKNA 107 (447)
T ss_dssp SEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE--CCCCSS
T ss_pred cEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE--cCCCCc
Confidence 7999999 899999999999999999986541 11345566787 77888888 88873
Q ss_pred eEEEEEeCCCcEEEEecCcceee---------------------------------------Eee--eCCCCeeEEEECC
Q 013282 248 VHFTASNNDCGVRDFDMGKYQLS---------------------------------------KHF--RFPWPVNHSSQSP 286 (446)
Q Consensus 248 ~~l~s~s~dg~v~iwd~~~~~~~---------------------------------------~~~--~~~~~v~~~~~sp 286 (446)
..|++++.|++|++|++.+++.. ..+ .|...|.+++|+|
T Consensus 108 ~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 187 (447)
T 3dw8_B 108 AQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINS 187 (447)
T ss_dssp SEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECT
T ss_pred ceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcC
Confidence 37899999999999999765432 122 3888999999999
Q ss_pred CCCEEEEEecCCcEEEEECCC-CceEE-------EecCCCCceeEEEECCCC-CEEEEEeCCCcEEEEEccCCCcc----
Q 013282 287 DGKLLIIVGDNPDGLLVDSMT-GKTIA-------SLCGHLDFSFASAWHPNG-VTFATGNQDKTCRIWDLRNLSES---- 353 (446)
Q Consensus 287 ~~~~l~~~~~d~~i~i~d~~~-~~~~~-------~~~~~~~~v~~~~~~p~~-~~l~sgs~d~~v~iwd~~~~~~~---- 353 (446)
++++|++| .|+.|++||+++ ++.+. .+.+|...|.+++|+|++ ++|++|+.||+|++||++. ...
T Consensus 188 ~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~ 265 (447)
T 3dw8_B 188 DYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA-SALCDRH 265 (447)
T ss_dssp TSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT-CSSSCTT
T ss_pred CCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC-Cccccce
Confidence 99999998 799999999994 44444 256899999999999998 9999999999999999976 444
Q ss_pred eEEEecCCC------------ceEEEEEccCCCEEEEEeCCCeEEEEEcCC-CeeEeEeeccccC---------------
Q 013282 354 VAVLKGNLG------------AIRSIRYTSDGRYMATAEPADFVHVYDVKS-GYEKEQEIDFFGE--------------- 405 (446)
Q Consensus 354 ~~~~~~~~~------------~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~-~~~~~~~~~~~~~--------------- 405 (446)
+..+.+|.. .|.+++|+|+|++|++++. +.|++||+++ +..+..+..|...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~ 344 (447)
T 3dw8_B 266 SKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFD 344 (447)
T ss_dssp CEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGC
T ss_pred eeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccccccccccccc
Confidence 688888876 8999999999999999999 9999999997 7777777777542
Q ss_pred eEEEEEcCCCCcEEEEEecCCcceE
Q 013282 406 ISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+..++|+|++++|++|+.|+.+..|
T Consensus 345 ~~~~~~s~~~~~l~s~s~dg~v~iw 369 (447)
T 3dw8_B 345 KFECCWNGSDSVVMTGSYNNFFRMF 369 (447)
T ss_dssp CCCEEECTTSSEEEEECSTTEEEEE
T ss_pred ceEEEECCCCCEEEEeccCCEEEEE
Confidence 2349999999999999999887655
No 83
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-30 Score=257.50 Aligned_cols=228 Identities=14% Similarity=0.156 Sum_probs=205.1
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.+.++++++++|++|+.||+|++|++.+... ...+.+|.+.|.++.+ +|++ .+++|+.||+|++||+.+++++
T Consensus 124 v~~~~~~~~~~l~sgs~dg~i~vwd~~~~~~---~~~~~~h~~~V~~l~~--~~~~--~l~s~s~dg~i~vwd~~~~~~~ 196 (464)
T 3v7d_B 124 VITCLQFEDNYVITGADDKMIRVYDSINKKF---LLQLSGHDGGVWALKY--AHGG--ILVSGSTDRTVRVWDIKKGCCT 196 (464)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEETTTTEE---EEEECCCSSCEEEEEE--CSTT--EEEEEETTSCEEEEETTTTEEE
T ss_pred cEEEEEECCCEEEEEcCCCcEEEEECCCCcE---EEEEeCCCcCEEEEEE--cCCC--EEEEEeCCCCEEEEECCCCcEE
Confidence 3678889999999999999999999987743 4566789999999988 8877 7999999999999999999999
Q ss_pred Eeee-CCCCeeEEEEC--CCCCEEEEEecCCcEEEEECCCCce-----------------------EEEecCCCCceeEE
Q 013282 271 KHFR-FPWPVNHSSQS--PDGKLLIIVGDNPDGLLVDSMTGKT-----------------------IASLCGHLDFSFAS 324 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~s--p~~~~l~~~~~d~~i~i~d~~~~~~-----------------------~~~~~~~~~~v~~~ 324 (446)
..+. |..+|.+++|+ |+++++++++.|+.|++||+++++. +..+.+|...+.++
T Consensus 197 ~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 276 (464)
T 3v7d_B 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 276 (464)
T ss_dssp EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE
T ss_pred EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE
Confidence 8888 89999999998 5788999999999999999987652 55677888888877
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc
Q 013282 325 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 404 (446)
Q Consensus 325 ~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 404 (446)
+|+++++++|+.|++|++||+++ .+++..+.+|...|.+++|+|++++|++|+.||.|++||+.+++.+..+.+|..
T Consensus 277 --~~~~~~l~~~~~d~~i~vwd~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~ 353 (464)
T 3v7d_B 277 --SGHGNIVVSGSYDNTLIVWDVAQ-MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTA 353 (464)
T ss_dssp --EEETTEEEEEETTSCEEEEETTT-TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred --cCCCCEEEEEeCCCeEEEEECCC-CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCC
Confidence 56789999999999999999976 788999999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 405 EISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 405 ~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.|.+++|+ +.+|++++.|+++..|
T Consensus 354 ~v~~~~~~--~~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 354 LVGLLRLS--DKFLVSAAADGSIRGW 377 (464)
T ss_dssp CEEEEEEC--SSEEEEEETTSEEEEE
T ss_pred cEEEEEEc--CCEEEEEeCCCcEEEE
Confidence 99999998 5799999999987655
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-30 Score=251.91 Aligned_cols=234 Identities=15% Similarity=0.140 Sum_probs=198.9
Q ss_pred eEEEEEe--CCc-EEEEeccCCcEEEEEc----CCCCeee---EEEEeec----------CCCceeeEEEEeCCCCCeEE
Q 013282 191 QVSTLAV--KDK-LLVAGGFQGELICKHL----DRPGVSF---CSRTTYD----------DNAITNAVEIYGSPSGAVHF 250 (446)
Q Consensus 191 ~v~~l~~--~~~-~l~tg~~dg~i~vw~~----~~~~~~~---~~~~~~~----------~~~~v~~i~~~~s~~~~~~l 250 (446)
.|.+++| +++ +|++|+.||.|++|++ .++.... ....+.. |...|.++.| +|++. +|
T Consensus 47 ~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~-~l 123 (425)
T 1r5m_A 47 NIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW--SHDGN-SI 123 (425)
T ss_dssp CCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE--CTTSS-EE
T ss_pred ceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE--cCCCC-EE
Confidence 5788888 788 9999999999999999 7665200 1122222 5668888887 99987 69
Q ss_pred EEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE----------------
Q 013282 251 TASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS---------------- 313 (446)
Q Consensus 251 ~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~---------------- 313 (446)
++++.||.|++|+ .+++.+..+. |..+|.+++|+|++++|++++.++.|++||+.+++.+..
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 9999999999999 5666667666 889999999999999999999999999999987765443
Q ss_pred ----------------------------------------ecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcc
Q 013282 314 ----------------------------------------LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 353 (446)
Q Consensus 314 ----------------------------------------~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~ 353 (446)
+.+|...|.+++|+|++++|++++.|+.|++||++. .+.
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~-~~~ 281 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGN-GNS 281 (425)
T ss_dssp ---CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSS-BSC
T ss_pred cCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-Ccc
Confidence 345778899999999999999999999999999976 778
Q ss_pred eEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 354 VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 354 ~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+..+.+|...|.+++|+|++ +|++++.++.|++||+.+++.+..+..|...|.+++|+|++++|++++.|+.+..|
T Consensus 282 ~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 282 QNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp SEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 88888999999999999999 99999999999999999999999999999999999999999999999999887544
No 85
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=9.5e-31 Score=252.04 Aligned_cols=233 Identities=15% Similarity=0.137 Sum_probs=189.6
Q ss_pred eEEEEEe--CC-cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV--KD-KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~--~~-~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.|.+++| ++ ++|++|+.||.|++|++.+..... .....+|...|.++.| +|++..+|++++.|+.|++||+.+.
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~h~~~v~~~~~--~~~~~~~l~s~~~d~~i~iwd~~~~ 151 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS-FIQGMGPGDAITGMKF--NQFNTNQLFVSSIRGATTLRDFSGS 151 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE-EECCCSTTCBEEEEEE--ETTEEEEEEEEETTTEEEEEETTSC
T ss_pred CEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce-eeecCCcCCceeEEEe--CCCCCCEEEEEeCCCEEEEEECCCC
Confidence 5999998 66 899999999999999998766442 2222468889999988 8854458999999999999999864
Q ss_pred eeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCC-EEEEEeCCCcEE
Q 013282 268 QLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGV-TFATGNQDKTCR 343 (446)
Q Consensus 268 ~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~sgs~d~~v~ 343 (446)
....... +...|.+++|+|++++|++++.++.|++||+ +++.+..+.+|...|.+++|+|+++ +|++|+.|++|+
T Consensus 152 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~ 230 (383)
T 3ei3_B 152 VIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVK 230 (383)
T ss_dssp EEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEE
T ss_pred ceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEE
Confidence 4333332 3477999999999999999999999999999 5788999999999999999999998 999999999999
Q ss_pred EEEccCC---CcceEEEecCCCceEEEEEcc-CCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc----------------
Q 013282 344 IWDLRNL---SESVAVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEIDFF---------------- 403 (446)
Q Consensus 344 iwd~~~~---~~~~~~~~~~~~~v~~l~~s~-dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------------- 403 (446)
+||++.. ..++..+ +|...|++++|+| +|++|++++.|+.|++||++++..+..+..|.
T Consensus 231 iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 309 (383)
T 3ei3_B 231 LWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHP 309 (383)
T ss_dssp EEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECS
T ss_pred EEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccC
Confidence 9999762 3344555 7899999999999 99999999999999999999887766666443
Q ss_pred -cCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 404 -GEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 404 -~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+.+..++|+|+|++ +++.|+.+..|
T Consensus 310 ~~~~~~~~~s~dg~~--s~s~d~~i~iw 335 (383)
T 3ei3_B 310 MYDLIVAGRYPDDQL--LLNDKRTIDIY 335 (383)
T ss_dssp SSSEEEEECBCCTTT--CTTCCCCEEEE
T ss_pred CCCceEEEecCCccc--ccCCCCeEEEE
Confidence 23444666666665 55567766443
No 86
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-29 Score=248.72 Aligned_cols=255 Identities=16% Similarity=0.272 Sum_probs=219.7
Q ss_pred ccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCC
Q 013282 141 SKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 141 ~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
+...+....++.|++|+..+++. +..+.+|.. .|.++++++++|++|+.||+|++|++.+..
T Consensus 129 g~~l~sg~~dg~i~vwd~~~~~~--~~~~~~h~~----------------~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 190 (445)
T 2ovr_B 129 GNRIVSGSDDNTLKVWSAVTGKC--LRTLVGHTG----------------GVWSSQMRDNIIISGSTDRTLKVWNAETGE 190 (445)
T ss_dssp TTEEEEEETTSCEEEEETTTCCE--EEECCCCSS----------------CEEEEEEETTEEEEEETTSCEEEEETTTTE
T ss_pred CCEEEEEECCCcEEEEECCCCcE--EEEEcCCCC----------------CEEEEEecCCEEEEEeCCCeEEEEECCcCc
Confidence 34445556688999999988743 344444432 599999999999999999999999998774
Q ss_pred eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCc
Q 013282 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPD 299 (446)
Q Consensus 221 ~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~ 299 (446)
+...+..|...|.++.+ + +. .+++|+.||.|++||+.+++.+..+. |..+|.++++ +++.+++|+.++.
T Consensus 191 ---~~~~~~~h~~~v~~~~~--~--~~-~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~ 260 (445)
T 2ovr_B 191 ---CIHTLYGHTSTVRCMHL--H--EK-RVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFM 260 (445)
T ss_dssp ---EEEEECCCSSCEEEEEE--E--TT-EEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSC
T ss_pred ---EEEEECCCCCcEEEEEe--c--CC-EEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCE
Confidence 34566688889998877 3 34 69999999999999999999988887 8899999999 6889999999999
Q ss_pred EEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEE
Q 013282 300 GLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA 379 (446)
Q Consensus 300 i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~ 379 (446)
|++||+++++++..+.+|...|.+++| ++.++++|+.|++|++||+++ ++++..+.+|...+.++.+ ++++|++|
T Consensus 261 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~~ 335 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVET-GNCIHTLTGHQSLTSGMEL--KDNILVSG 335 (445)
T ss_dssp EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTT-CCEEEEECCCCSCEEEEEE--ETTEEEEE
T ss_pred EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCC-CCEEEEEcCCcccEEEEEE--eCCEEEEE
Confidence 999999999999999999999999999 788999999999999999976 7888999999999988877 46799999
Q ss_pred eCCCeEEEEEcCCCeeEeEeec---cccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 380 EPADFVHVYDVKSGYEKEQEID---FFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 380 ~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+.||.|++||+++++.+..+.. |...|.+++|+ +++|++|+.|+.+..|
T Consensus 336 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 336 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLW 387 (445)
T ss_dssp ETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEE
Confidence 9999999999999988888876 78899999996 5799999999887654
No 87
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=1.8e-30 Score=274.32 Aligned_cols=233 Identities=17% Similarity=0.226 Sum_probs=210.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ++.+|++|+.+|.|++|++.++.. ...+..|...|.++.| +|++. +|++++.||.|++||+.+++
T Consensus 15 ~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~---~~~~~~~~~~v~~~~~--s~~~~-~l~~~~~dg~i~vw~~~~~~ 88 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE---VRSIQVTETPVRAGKF--IARKN-WIIVGSDDFRIRVFNYNTGE 88 (814)
T ss_dssp CEEEEEECSSSSEEEEEETTSEEEEEETTTTEE---EEEEECCSSCEEEEEE--EGGGT-EEEEEETTSEEEEEETTTCC
T ss_pred ceEEEEECCCCCEEEEEeCCCEEEEEECCCCce---EEEEecCCCcEEEEEE--eCCCC-EEEEEeCCCeEEEEECCCCc
Confidence 6888888 899999999999999999987643 3555678899999988 89988 69999999999999999999
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC-ceEEEecCCCCceeEEEECC-CCCEEEEEeCCCcEEEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v~iw 345 (446)
.+..+. |...|.+++|+|++++|++++.++.|++||+.++ .....+.+|...|.+++|+| ++..|++++.||+|++|
T Consensus 89 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vw 168 (814)
T 3mkq_A 89 KVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVW 168 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEE
T ss_pred EEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 988888 8999999999999999999999999999999987 67788889999999999999 89999999999999999
Q ss_pred EccCCCcceEEEecCC-CceEEEEEcc--CCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 346 DLRNLSESVAVLKGNL-GAIRSIRYTS--DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 346 d~~~~~~~~~~~~~~~-~~v~~l~~s~--dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
|++. ......+..+. ..+.+++|+| ++++|++++.+|.|++||+.++..+..+..|.+.|.+++|+|++++|++++
T Consensus 169 d~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~ 247 (814)
T 3mkq_A 169 SLGQ-STPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGS 247 (814)
T ss_dssp ETTC-SSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEE
T ss_pred ECCC-CcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe
Confidence 9976 55555665544 8899999999 999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcceE
Q 013282 423 WDRTYGSL 430 (446)
Q Consensus 423 ~D~~~~~~ 430 (446)
.|+.+..|
T Consensus 248 ~dg~v~vw 255 (814)
T 3mkq_A 248 EDGTLKIW 255 (814)
T ss_dssp TTSCEEEE
T ss_pred CCCeEEEE
Confidence 99887654
No 88
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.98 E-value=4.9e-31 Score=251.50 Aligned_cols=235 Identities=14% Similarity=0.099 Sum_probs=200.4
Q ss_pred eEEEEEeC------CcEEEEeccCCcEEEEEcCCCCeeeEEEEee--cCCCceeeEEEEeCCCC---CeEEEEEeCCCcE
Q 013282 191 QVSTLAVK------DKLLVAGGFQGELICKHLDRPGVSFCSRTTY--DDNAITNAVEIYGSPSG---AVHFTASNNDCGV 259 (446)
Q Consensus 191 ~v~~l~~~------~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~--~~~~~v~~i~~~~s~~~---~~~l~s~s~dg~v 259 (446)
.|.++++. ...+++++.++.|++|++.+........... .|...+.++.| +|++ ..+|++|+.||.|
T Consensus 20 ~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~~~~l~~~~~dg~i 97 (366)
T 3k26_A 20 PLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAW--TYDSNTSHPLLAVAGSRGII 97 (366)
T ss_dssp CEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEE--EECTTTCCEEEEEEETTCEE
T ss_pred ceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEe--ccCCCCCCCEEEEecCCCEE
Confidence 69999994 4667778888899999998766443333222 36677888888 6663 2479999999999
Q ss_pred EEEecCcceeeEeee-CCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEe---cCCCCceeEEEECCCCCEEE
Q 013282 260 RDFDMGKYQLSKHFR-FPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASL---CGHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 260 ~iwd~~~~~~~~~~~-~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~~~p~~~~l~ 334 (446)
++||+.+++.+..+. |..+|.+++|+| ++++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|+
T Consensus 98 ~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 177 (366)
T 3k26_A 98 RIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIM 177 (366)
T ss_dssp EEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEE
T ss_pred EEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEE
Confidence 999999999998888 899999999999 9999999999999999999999999888 68999999999999999999
Q ss_pred EEeCCCcEEEEEccCCCcceEE----------------------------EecCCCceEEEEEccCCCEEEEEeCCCeEE
Q 013282 335 TGNQDKTCRIWDLRNLSESVAV----------------------------LKGNLGAIRSIRYTSDGRYMATAEPADFVH 386 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~----------------------------~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~ 386 (446)
+++.|+.|++||++. .+.... ..+|...|.+++|+ +++|++++.|+.|+
T Consensus 178 ~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~ 254 (366)
T 3k26_A 178 SCGMDHSLKLWRINS-KRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIV 254 (366)
T ss_dssp EEETTSCEEEEESCS-HHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEE
T ss_pred EecCCCCEEEEECCC-CccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCCEEE
Confidence 999999999999975 433322 23389999999998 77999999999999
Q ss_pred EEEcCCCee--------------EeEeeccccCeEEEEEcCC--CCcEEEEEecCCcceE
Q 013282 387 VYDVKSGYE--------------KEQEIDFFGEISGISFSPD--TESLFIGVWDRTYGSL 430 (446)
Q Consensus 387 iwd~~~~~~--------------~~~~~~~~~~v~~~~~spd--g~~l~~~~~D~~~~~~ 430 (446)
+||+.++.. +..+..|...|.+++|+|+ +++|++|+.|+.+..|
T Consensus 255 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vw 314 (366)
T 3k26_A 255 CWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVW 314 (366)
T ss_dssp EEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEE
T ss_pred EEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEE
Confidence 999987643 6777788999999999999 9999999999987655
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=1.1e-29 Score=246.33 Aligned_cols=231 Identities=17% Similarity=0.209 Sum_probs=200.9
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.+.+++++++.+++++.+|.|++|++.++.... .....|...|.++.+ +|++. +|++|+.||.|++||+.+++.+
T Consensus 95 ~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~~--~~~~~~~~~v~~v~~--s~~~~-~l~~~~~dg~i~iwd~~~~~~~ 169 (401)
T 4aez_A 95 YLNLLDWSNLNVVAVALERNVYVWNADSGSVSA--LAETDESTYVASVKW--SHDGS-FLSVGLGNGLVDIYDVESQTKL 169 (401)
T ss_dssp TCBCEEECTTSEEEEEETTEEEEEETTTCCEEE--EEECCTTCCEEEEEE--CTTSS-EEEEEETTSCEEEEETTTCCEE
T ss_pred eEEEEeecCCCEEEEECCCeEEEeeCCCCcEeE--eeecCCCCCEEEEEE--CCCCC-EEEEECCCCeEEEEECcCCeEE
Confidence 467788877889999999999999998876442 333347888999888 99987 6999999999999999999988
Q ss_pred Eeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECC-CCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 271 KHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
..+. |...|.+++| +++.|++++.++.|++||++ .+..+..+.+|...|.+++|+|++++|++|+.|++|++||++
T Consensus 170 ~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~ 247 (401)
T 4aez_A 170 RTMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDAR 247 (401)
T ss_dssp EEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred EEecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCC
Confidence 8887 8899999999 46899999999999999999 567788899999999999999999999999999999999997
Q ss_pred CCCcceEEEecCCCceEEEEEccCCC-EEEEEe--CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEE--e
Q 013282 349 NLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE--PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV--W 423 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~--~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--~ 423 (446)
. ..++..+..|...|.+++|+|++. ++++++ .|+.|++||+.++..+..+. +...|.+++|+|++++|++++ .
T Consensus 248 ~-~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~ 325 (401)
T 4aez_A 248 S-SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFP 325 (401)
T ss_dssp C-SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTT
T ss_pred C-CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecC
Confidence 6 778888889999999999999775 566655 69999999999998777664 677899999999999999965 6
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|+.+..|
T Consensus 326 dg~i~v~ 332 (401)
T 4aez_A 326 DNNLSIW 332 (401)
T ss_dssp TCEEEEE
T ss_pred CCcEEEE
Confidence 7776554
No 90
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.98 E-value=1.2e-29 Score=280.01 Aligned_cols=283 Identities=15% Similarity=0.183 Sum_probs=234.5
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
.+..|...+.+..++++.+.++ ....++.|.+|+..+++. +..+.+|.. .|.++
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~--------s~~~d~~i~vw~~~~~~~--~~~~~~h~~----------------~v~~~ 663 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIA--------SCGADKTLQVFKAETGEK--LLDIKAHED----------------EVLCC 663 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEE--------EEETTSCEEEEETTTCCE--EEEECCCSS----------------CEEEE
T ss_pred EEecccccEEEEEECCCCCEEE--------EEeCCCeEEEEECCCCCE--EEEeccCCC----------------CEEEE
Confidence 3445555555555555444333 334577899999988854 344444422 58899
Q ss_pred Ee--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCC-CeEEEEEeCCCcEEEEecCcceeeEe
Q 013282 196 AV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSG-AVHFTASNNDCGVRDFDMGKYQLSKH 272 (446)
Q Consensus 196 ~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~-~~~l~s~s~dg~v~iwd~~~~~~~~~ 272 (446)
+| ++++|++|+.||+|++|++.++.. ...+..|...|.++.| +|++ ..++++|+.|+.|++||+.+++++..
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~~~---~~~~~~~~~~v~~~~~--~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~ 738 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATGKL---VHTYDEHSEQVNCCHF--TNKSNHLLLATGSNDFFLKLWDLNQKECRNT 738 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCE---EEEEECCSSCEEEEEE--CSSSSCCEEEEEETTSCEEEEETTSSSEEEE
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCCce---EEEEcCCCCcEEEEEE--ecCCCceEEEEEeCCCeEEEEECCCcchhhe
Confidence 88 889999999999999999988754 3556688999999988 7743 34788999999999999999998888
Q ss_pred ee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecC-------------CCCceeEEEECCCCCEEEEEeC
Q 013282 273 FR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG-------------HLDFSFASAWHPNGVTFATGNQ 338 (446)
Q Consensus 273 ~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------~~~~v~~~~~~p~~~~l~sgs~ 338 (446)
+. |..+|.+++|+|++++|++++.||.|++||+.+++....+.. +...+.+++|+|+|+.+++++
T Consensus 739 ~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~- 817 (1249)
T 3sfz_A 739 MFGHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAA- 817 (1249)
T ss_dssp ECCCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEE-
T ss_pred ecCCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEc-
Confidence 77 899999999999999999999999999999999887766542 233788999999999999988
Q ss_pred CCcEEEEEccCCCcceEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCc
Q 013282 339 DKTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTES 417 (446)
Q Consensus 339 d~~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 417 (446)
++.+.+||+.. +..+..+ .+|...|.+++|+|+++++++++.+|.|++||+.++..+..+.+|.+.|.+++|+|+|++
T Consensus 818 ~~~v~~~d~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 896 (1249)
T 3sfz_A 818 KNKVLLFDIHT-SGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSS 896 (1249)
T ss_dssp TTEEEEEETTT-CCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCcEEEEEecC-CCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCE
Confidence 68999999977 4545544 489999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEecCCcceEE
Q 013282 418 LFIGVWDRTYGSLL 431 (446)
Q Consensus 418 l~~~~~D~~~~~~l 431 (446)
|++++.|+++..|-
T Consensus 897 l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 897 FLTASDDQTIRVWE 910 (1249)
T ss_dssp EEEEETTSCEEEEE
T ss_pred EEEEeCCCeEEEEE
Confidence 99999999887663
No 91
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.1e-30 Score=256.29 Aligned_cols=234 Identities=15% Similarity=0.178 Sum_probs=193.9
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCC---CCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDR---PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~---~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~ 264 (446)
.|.++++ ++++||+|+.||+|+||++.. .....+ .....|...|.++.+ +|++. +|++++.||.|++||+
T Consensus 65 ~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~-~~~~~h~~~v~~~~~--~~~~~-~l~s~s~dg~i~vwd~ 140 (437)
T 3gre_A 65 SITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSS-SLTYDCSSTVTQITM--IPNFD-AFAVSSKDGQIIVLKV 140 (437)
T ss_dssp CEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSC-SEEEECSSCEEEEEE--CTTSS-EEEEEETTSEEEEEEE
T ss_pred ceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccce-eeeccCCCCEEEEEE--eCCCC-EEEEEeCCCEEEEEEe
Confidence 5888888 578999999999999999876 321111 122258888999988 89887 6999999999999999
Q ss_pred C---cceeeEeee-------------CCCCeeEEE--ECCCCCEEEEEecCCcEEEEECCCCceEEEecC--CCCceeEE
Q 013282 265 G---KYQLSKHFR-------------FPWPVNHSS--QSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG--HLDFSFAS 324 (446)
Q Consensus 265 ~---~~~~~~~~~-------------~~~~v~~~~--~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~~~v~~~ 324 (446)
. +++....+. +...+.++. ++|++++|++++.++.|++||+++++++..+.+ |...|.++
T Consensus 141 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~ 220 (437)
T 3gre_A 141 NHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSI 220 (437)
T ss_dssp EEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEE
T ss_pred ccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEE
Confidence 5 444333222 345566666 668899999999999999999999999999998 89999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEEccCCCcceEEEe-cCCCceEEEEEc----cCCCEEEEEeCCCeEEEEEcCCCeeEeEe
Q 013282 325 AWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK-GNLGAIRSIRYT----SDGRYMATAEPADFVHVYDVKSGYEKEQE 399 (446)
Q Consensus 325 ~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~-~~~~~v~~l~~s----~dg~~l~~~~~dg~i~iwd~~~~~~~~~~ 399 (446)
+|+|++++|++|+.||+|++||++. +.++..+. .|..+|++++|+ |++++|++|+.||.|++||+.+++.+..+
T Consensus 221 ~~s~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 299 (437)
T 3gre_A 221 CIDEECCVLILGTTRGIIDIWDIRF-NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAF 299 (437)
T ss_dssp EECTTSCEEEEEETTSCEEEEETTT-TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCC-ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEE
Confidence 9999999999999999999999976 77888876 788899999655 56889999999999999999999887777
Q ss_pred ec--------------------------cccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 400 ID--------------------------FFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 400 ~~--------------------------~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.+ |...|.+++|+ ++++|++|+.|+.+..|
T Consensus 300 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~w 355 (437)
T 3gre_A 300 INSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMF 355 (437)
T ss_dssp ESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEE
T ss_pred EcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEE
Confidence 64 44558889999 77899999999987655
No 92
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=8.6e-31 Score=274.23 Aligned_cols=236 Identities=14% Similarity=0.150 Sum_probs=203.1
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.|++++| ++++|++|+.||.|+||++..... .....+.+|.+.|.++.+ +|+ +. +|++|+.||.|++||+.+
T Consensus 11 ~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~-~~~~~l~~h~~~V~~l~~--s~~~~~~-~l~s~s~Dg~I~vwd~~~ 86 (753)
T 3jro_A 11 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH-KLIDTLTGHEGPVWRVDW--AHPKFGT-ILASCSYDGKVLIWKEEN 86 (753)
T ss_dssp CEEEECCCSSSCCEEEEETTTEEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CCTTSCS-EEEEEETTSCEEEEEEET
T ss_pred eeEEEEECCCCCeEEEEECCCcEEEEecCCCCC-ccceeccCCcCceEEEEe--cCCCCCC-EEEEEeCCCeEEEEECCC
Confidence 6999998 889999999999999999975432 334566789999999988 776 66 799999999999999998
Q ss_pred ce--eeEeee-CCCCeeEEEECCC--CCEEEEEecCCcEEEEECCCC--ceEEEecCCCCceeEEEECC-----------
Q 013282 267 YQ--LSKHFR-FPWPVNHSSQSPD--GKLLIIVGDNPDGLLVDSMTG--KTIASLCGHLDFSFASAWHP----------- 328 (446)
Q Consensus 267 ~~--~~~~~~-~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~--~~~~~~~~~~~~v~~~~~~p----------- 328 (446)
++ .+..+. |..+|.+++|+|+ ++.+++|+.||.|++||++++ .....+.+|...|.+++|+|
T Consensus 87 ~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~ 166 (753)
T 3jro_A 87 GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNG 166 (753)
T ss_dssp TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC---------
T ss_pred CcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccccc
Confidence 86 445554 8899999999999 999999999999999999877 34456678999999999999
Q ss_pred --CCCEEEEEeCCCcEEEEEccCCC---cceEEEecCCCceEEEEEccC---CCEEEEEeCCCeEEEEEcCCCe-----e
Q 013282 329 --NGVTFATGNQDKTCRIWDLRNLS---ESVAVLKGNLGAIRSIRYTSD---GRYMATAEPADFVHVYDVKSGY-----E 395 (446)
Q Consensus 329 --~~~~l~sgs~d~~v~iwd~~~~~---~~~~~~~~~~~~v~~l~~s~d---g~~l~~~~~dg~i~iwd~~~~~-----~ 395 (446)
++.+|++|+.||+|++||++... .+...+.+|.++|++++|+|+ +++|++|+.||.|++||+.++. .
T Consensus 167 ~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~ 246 (753)
T 3jro_A 167 TKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKT 246 (753)
T ss_dssp CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCC
T ss_pred CCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeE
Confidence 58999999999999999997643 455677899999999999999 8999999999999999999864 2
Q ss_pred EeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 396 KEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 396 ~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
......|.+.|.+++|+|+|++|++|+.|+.+..|
T Consensus 247 ~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 247 LLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281 (753)
T ss_dssp BSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECC
T ss_pred EeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEE
Confidence 33334578899999999999999999999987655
No 93
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=1.4e-29 Score=269.19 Aligned_cols=273 Identities=14% Similarity=0.111 Sum_probs=204.6
Q ss_pred eeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcE
Q 013282 134 RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGEL 211 (446)
Q Consensus 134 ~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i 211 (446)
..+.|..+...+....++.|++|+..+++....+... + .|+++++ ++++|++|+.||+|
T Consensus 62 ~~l~fspg~~L~S~s~D~~v~lWd~~~~~~~~~~~~~----------~---------~V~~v~~sp~g~~l~sgs~dg~V 122 (902)
T 2oaj_A 62 KEMRFVKGIYLVVINAKDTVYVLSLYSQKVLTTVFVP----------G---------KITSIDTDASLDWMLIGLQNGSM 122 (902)
T ss_dssp EEEEEETTTEEEEEETTCEEEEEETTTCSEEEEEECS----------S---------CEEEEECCTTCSEEEEEETTSCE
T ss_pred EEEEEcCCCEEEEEECcCeEEEEECCCCcEEEEEcCC----------C---------CEEEEEECCCCCEEEEEcCCCcE
Confidence 3344555333455566889999999887554333211 1 5889988 89999999999999
Q ss_pred EEEEcCCCCeeeEE--------EEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-C-------
Q 013282 212 ICKHLDRPGVSFCS--------RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-F------- 275 (446)
Q Consensus 212 ~vw~~~~~~~~~~~--------~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~------- 275 (446)
++|++......... ....+|.+.|.+++| +|++...+++|+.||.| +||+.+++++..+. +
T Consensus 123 ~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~--sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~ 199 (902)
T 2oaj_A 123 IVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQW--NPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPG 199 (902)
T ss_dssp EEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEE--ETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCC
T ss_pred EEEECCCCccccceeccccccccccccCCCCeEEEEE--ccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCC
Confidence 99999876432110 123567888999888 89765579999999999 99999999888776 2
Q ss_pred -----------CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE--ec---C-------------CCCceeEE--
Q 013282 276 -----------PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS--LC---G-------------HLDFSFAS-- 324 (446)
Q Consensus 276 -----------~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~--~~---~-------------~~~~v~~~-- 324 (446)
...|.+++|+|+|++|++++.|+.|++||+++++++.. +. . |...|.++
T Consensus 200 ~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w 279 (902)
T 2oaj_A 200 GDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYW 279 (902)
T ss_dssp STTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEE
T ss_pred cccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEE
Confidence 36799999999999999999999999999977654331 10 0 01112222
Q ss_pred --------------------------------------------------------------------------------
Q 013282 325 -------------------------------------------------------------------------------- 324 (446)
Q Consensus 325 -------------------------------------------------------------------------------- 324 (446)
T Consensus 280 ~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~ 359 (902)
T 2oaj_A 280 MCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFA 359 (902)
T ss_dssp EECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHH
T ss_pred EecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcC
Confidence
Q ss_pred --------------------------------------------------------------------------------
Q 013282 325 -------------------------------------------------------------------------------- 324 (446)
Q Consensus 325 -------------------------------------------------------------------------------- 324 (446)
T Consensus 360 g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~ 439 (902)
T 2oaj_A 360 GCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKR 439 (902)
T ss_dssp HTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCC
T ss_pred CCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCC
Confidence
Q ss_pred --EECCCCCEEEEEeCCCcEEEEEccCCCcce----EEE--e-----cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 325 --AWHPNGVTFATGNQDKTCRIWDLRNLSESV----AVL--K-----GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 325 --~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~----~~~--~-----~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
+|+|++++||+|+.|++|++||+.. +... ... . +|...|++++|+|+|++||+|+.||+|+||++.
T Consensus 440 sv~~spdg~~laSgs~DgtVrlWd~~~-g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 440 QKLPAEYGTAFITGHSNGSVRIYDASH-GDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp CCCCCSEEEEEEEEETTSEEEEEESSC-CTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred cccccccCcEEEEecCCCcEEEEECCC-ccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 2245566778888888888888754 2211 111 1 688899999999999999999999999999998
Q ss_pred CCe---------------------------------------------eEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 392 SGY---------------------------------------------EKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 392 ~~~---------------------------------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+++ ++..+.+|.+.|++++|||+| +||+|+.|++
T Consensus 519 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~t 597 (902)
T 2oaj_A 519 VNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGS 597 (902)
T ss_dssp ECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSE
T ss_pred CccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCc
Confidence 662 355667799999999999999 9999999998
Q ss_pred cceE
Q 013282 427 YGSL 430 (446)
Q Consensus 427 ~~~~ 430 (446)
+..|
T Consensus 598 v~lw 601 (902)
T 2oaj_A 598 LMLI 601 (902)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8665
No 94
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=2e-30 Score=245.30 Aligned_cols=234 Identities=11% Similarity=0.042 Sum_probs=200.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec-Ccc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM-GKY 267 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~-~~~ 267 (446)
.|.+++| ++++|++|+.||.|++|++..............|...|.++.+ +|++..+|++++.||.|++|++ .++
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~dg~i~~wd~~~~~ 90 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNF--IDNTDLQIYVGTVQGEILKVDLIGSP 90 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEE--EESSSEEEEEEETTSCEEEECSSSSS
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEE--CCCCCcEEEEEcCCCeEEEEEeccCC
Confidence 6899988 8899999999999999999887633333445578888999988 7887625889999999999999 888
Q ss_pred eeeEeee--CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC---------CceEEEecCCCCceeEEEECCCCCEEEEE
Q 013282 268 QLSKHFR--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT---------GKTIASLCGHLDFSFASAWHPNGVTFATG 336 (446)
Q Consensus 268 ~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~v~~~~~~p~~~~l~sg 336 (446)
+...... |...|.+++|+| +++|++++.++.|++||+++ ++++..+. |...|.+++|+|++ ++++
T Consensus 91 ~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~ 166 (342)
T 1yfq_A 91 SFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVG 166 (342)
T ss_dssp SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEE
T ss_pred ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEE
Confidence 8766666 889999999999 99999999999999999987 77777776 88999999999987 9999
Q ss_pred eCCCcEEEEEccC-CCc-ceEEEecCCCceEEEEEcc-CCCEEEEEeCCCeEEEEEcCCC------eeEeEeecccc---
Q 013282 337 NQDKTCRIWDLRN-LSE-SVAVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSG------YEKEQEIDFFG--- 404 (446)
Q Consensus 337 s~d~~v~iwd~~~-~~~-~~~~~~~~~~~v~~l~~s~-dg~~l~~~~~dg~i~iwd~~~~------~~~~~~~~~~~--- 404 (446)
+.++.|++||++. ... .......|...|++++|+| ++++|++++.+|.|++|++... .....+..|..
T Consensus 167 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (342)
T 1yfq_A 167 MNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLK 246 (342)
T ss_dssp ESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTT
T ss_pred eCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccc
Confidence 9999999999976 333 3334456788999999999 9999999999999999999886 66677777755
Q ss_pred ------CeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 405 ------EISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 405 ------~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.|.+++|+|++++|++++.|+.+..|
T Consensus 247 ~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 247 DTNLAYPVNSIEFSPRHKFLYTAGSDGIISCW 278 (342)
T ss_dssp CCSSCCCEEEEEECTTTCCEEEEETTSCEEEE
T ss_pred ccccceeEEEEEEcCCCCEEEEecCCceEEEE
Confidence 99999999999999999999887544
No 95
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=9.9e-31 Score=248.36 Aligned_cols=220 Identities=7% Similarity=0.007 Sum_probs=177.5
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC---------cce
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG---------KYQ 268 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~---------~~~ 268 (446)
++++|++|+.||.|++|++.++....... ...|..+.+ +|. +++++.|++|++|+.. +++
T Consensus 47 d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~-----~~~v~~~~~--~~~----~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 47 DKWVCMCRCEDGALHFTQLKDSKTITTIT-----TPNPRTGGE--HPA----IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp EEEEEEEEEETTEEEEEEESSSSCEEEEE-----EECCCTTCC--CCS----EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred CCCEEEEECCCCcEEEEECCCCcEEEEEe-----cCCceeeee--CCc----eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 78899999999999999998876543222 234555555 665 8899999999999665 455
Q ss_pred eeEeee--CCCCeeEEEECC--CCCEEEEEecCCcEEEEECCCCceEEEecC-CCCceeEEEECCCCCEEEEEeCCCcEE
Q 013282 269 LSKHFR--FPWPVNHSSQSP--DGKLLIIVGDNPDGLLVDSMTGKTIASLCG-HLDFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 269 ~~~~~~--~~~~v~~~~~sp--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
.+..+. |..+|.+++|+| +++++++++.|+.|++||+++++.+..+.. |...+.+++|+|+|.+|++|+.||+|+
T Consensus 116 ~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~ 195 (343)
T 3lrv_A 116 VLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILD 195 (343)
T ss_dssp EEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEE
T ss_pred eeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEE
Confidence 455544 567899999999 999999999999999999999998776643 556899999999999999999999999
Q ss_pred EEEccCCCcce-EEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec---cccCeE--EEEEcCCCC
Q 013282 344 IWDLRNLSESV-AVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID---FFGEIS--GISFSPDTE 416 (446)
Q Consensus 344 iwd~~~~~~~~-~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~--~~~~spdg~ 416 (446)
+||++. ++.+ ..+.. |.++|++++|+|+|++|++++ ++.|++||++++..+..+.. |...+. +++|+|+|+
T Consensus 196 iwd~~~-~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 273 (343)
T 3lrv_A 196 VYNLSS-PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGK 273 (343)
T ss_dssp EEESSC-TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSS
T ss_pred EEECCC-CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCC
Confidence 999987 4555 78888 999999999999999999999 55999999999866544433 333444 699999999
Q ss_pred cEEEEEe-cCCcceE
Q 013282 417 SLFIGVW-DRTYGSL 430 (446)
Q Consensus 417 ~l~~~~~-D~~~~~~ 430 (446)
+|++++. |+.+..+
T Consensus 274 ~l~~~s~~d~~i~v~ 288 (343)
T 3lrv_A 274 NMIAYSNESNSLTIY 288 (343)
T ss_dssp EEEEEETTTTEEEEE
T ss_pred EEEEecCCCCcEEEE
Confidence 9999988 7766544
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3e-30 Score=250.44 Aligned_cols=226 Identities=19% Similarity=0.248 Sum_probs=191.4
Q ss_pred EEEEeccCCcEEEEEcCCCCee-eEEEEeecCCCceeeEEEEeCC-CCCeEEEEEeCCCcEEEEecCcc-------eeeE
Q 013282 201 LLVAGGFQGELICKHLDRPGVS-FCSRTTYDDNAITNAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKY-------QLSK 271 (446)
Q Consensus 201 ~l~tg~~dg~i~vw~~~~~~~~-~~~~~~~~~~~~v~~i~~~~s~-~~~~~l~s~s~dg~v~iwd~~~~-------~~~~ 271 (446)
++++|+.+|.|+||++...+.. .....+.+|.+.|.++.| +| ++. +|++|+.||+|++|++.++ +++.
T Consensus 49 ~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~--~p~~~~-~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~ 125 (402)
T 2aq5_A 49 LICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAW--CPHNDN-VIASGSEDCTVMVWEIPDGGLVLPLREPVI 125 (402)
T ss_dssp EEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEE--CTTCTT-EEEEEETTSEEEEEECCTTCCSSCBCSCSE
T ss_pred EEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEe--CCCCCC-EEEEEeCCCeEEEEEccCCCCccccCCceE
Confidence 3445789999999999765322 122345678999999988 89 665 7999999999999999887 5566
Q ss_pred eee-CCCCeeEEEECCCC-CEEEEEecCCcEEEEECCCCceEEEe--cCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 272 HFR-FPWPVNHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASL--CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 272 ~~~-~~~~v~~~~~sp~~-~~l~~~~~d~~i~i~d~~~~~~~~~~--~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
.+. |...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ .+|...|.+++|+|++++|++++.|++|++||+
T Consensus 126 ~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 126 TLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEP 205 (402)
T ss_dssp EEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEET
T ss_pred EecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeC
Confidence 666 89999999999998 69999999999999999999999999 889999999999999999999999999999999
Q ss_pred cCCCcceEEE-ecCCCc-eEEEEEccCCCEEEEE---eCCCeEEEEEcCCCeeE-eE-eeccccCeEEEEEcCCCCcEEE
Q 013282 348 RNLSESVAVL-KGNLGA-IRSIRYTSDGRYMATA---EPADFVHVYDVKSGYEK-EQ-EIDFFGEISGISFSPDTESLFI 420 (446)
Q Consensus 348 ~~~~~~~~~~-~~~~~~-v~~l~~s~dg~~l~~~---~~dg~i~iwd~~~~~~~-~~-~~~~~~~v~~~~~spdg~~l~~ 420 (446)
+. ++.+..+ .+|.+. +.+++|+|++++|++| +.++.|++||++++... .. ...+...+.+++|+|++++|++
T Consensus 206 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~ 284 (402)
T 2aq5_A 206 RK-GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYL 284 (402)
T ss_dssp TT-TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEE
T ss_pred CC-CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEE
Confidence 76 7777777 688776 8999999999999999 78999999999987542 22 2347778999999999999976
Q ss_pred EE-ecCCcceE
Q 013282 421 GV-WDRTYGSL 430 (446)
Q Consensus 421 ~~-~D~~~~~~ 430 (446)
++ .|+.+..+
T Consensus 285 ~g~~dg~i~i~ 295 (402)
T 2aq5_A 285 CGKGDSSIRYF 295 (402)
T ss_dssp EETTCSCEEEE
T ss_pred EEcCCCeEEEE
Confidence 65 58877654
No 97
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-29 Score=233.86 Aligned_cols=225 Identities=14% Similarity=0.134 Sum_probs=197.8
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc--
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-- 267 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-- 267 (446)
.|.++++ ++++|++|+.||.|++|++.+.. .......|...+.++.+ +|++. +|++++.||.|++|++...
T Consensus 20 ~v~~~~~~~~~~l~s~~~dg~v~vw~~~~~~---~~~~~~~~~~~v~~~~~--~~~~~-~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 20 DVRDVVAVDDSKVASVSRDGTVRLWSKDDQW---LGTVVYTGQGFLNSVCY--DSEKE-LLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEEESSSE---EEEEEEECSSCEEEEEE--ETTTT-EEEEEETTSCEEEEETTCCTT
T ss_pred CcEEEEecCCCEEEEEEcCCcEEEEECCCCE---EEEEeecCCccEEEEEE--CCCCC-EEEEecCCCeEEEEEeeecCC
Confidence 5888888 89999999999999999997653 23555677888999988 89987 6999999999999998653
Q ss_pred -eeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECC-CCCEEEEEeCCCcEEE
Q 013282 268 -QLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRI 344 (446)
Q Consensus 268 -~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v~i 344 (446)
+.+..+. |...|.++.| +++++++++.++.|++|| .++.+..+..|...+.+++|+| +++++++++.|+.|++
T Consensus 94 ~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i 169 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKL 169 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEE
Confidence 4455555 8889999999 578999999999999999 7788888999999999999998 9999999999999999
Q ss_pred EEccCCCcceEEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 345 WDLRNLSESVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 345 wd~~~~~~~~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
||. ......+.. |...|.+++|+|+++ +++++.+|.|++||+++++.+..+..|.+.|.+++|+|++ .|++++.
T Consensus 170 ~d~---~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~ 244 (313)
T 3odt_A 170 WQN---DKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGE 244 (313)
T ss_dssp EET---TEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEET
T ss_pred Eec---CceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEec
Confidence 994 566777777 889999999999998 8999999999999999999999999999999999999999 6889988
Q ss_pred cCCcceE
Q 013282 424 DRTYGSL 430 (446)
Q Consensus 424 D~~~~~~ 430 (446)
|+.+..|
T Consensus 245 dg~v~iw 251 (313)
T 3odt_A 245 DRTVRIW 251 (313)
T ss_dssp TSEEEEE
T ss_pred CCEEEEE
Confidence 8876544
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.8e-30 Score=243.97 Aligned_cols=251 Identities=16% Similarity=0.216 Sum_probs=200.9
Q ss_pred eeeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEE
Q 013282 115 YEFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVST 194 (446)
Q Consensus 115 ~~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~ 194 (446)
..++.|...|.++.+++..+.++.+ ..++.|.+|+...........+.+|.. .|.+
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~h~~----------------~v~~ 60 (379)
T 3jrp_A 5 VIANAHNELIHDAVLDYYGKRLATC--------SSDKTIKIFEVEGETHKLIDTLTGHEG----------------PVWR 60 (379)
T ss_dssp CCEEECCCCEEEEEECSSSSEEEEE--------ETTSCEEEEEEETTEEEEEEEECCCSS----------------CEEE
T ss_pred EEecCCcccEEEEEEcCCCCEEEEE--------ECCCcEEEEecCCCcceeeeEecCCCC----------------cEEE
Confidence 4567777788888887765555443 346778999987554455555655432 5999
Q ss_pred EEe--C--CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCcce
Q 013282 195 LAV--K--DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 195 l~~--~--~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
++| + +++|++|+.||.|++|++...... .......|...+.++.+ +|+ +. +|++++.|+.|++||+.++.
T Consensus 61 ~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~-~~~~~~~~~~~v~~~~~--~~~~~~~-~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 61 VDWAHPKFGTILASCSYDGKVLIWKEENGRWS-QIAVHAVHSASVNSVQW--APHEYGP-LLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp EEECCGGGCSEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTSEEEEEECCTTS
T ss_pred EEeCCCCCCCEEEEeccCCEEEEEEcCCCcee-EeeeecCCCcceEEEEe--CCCCCCC-EEEEecCCCcEEEEecCCCC
Confidence 998 3 899999999999999999876422 34556678888999888 888 66 79999999999999998764
Q ss_pred ee--Eee-eCCCCeeEEEECC-------------CCCEEEEEecCCcEEEEECCCCc----eEEEecCCCCceeEEEECC
Q 013282 269 LS--KHF-RFPWPVNHSSQSP-------------DGKLLIIVGDNPDGLLVDSMTGK----TIASLCGHLDFSFASAWHP 328 (446)
Q Consensus 269 ~~--~~~-~~~~~v~~~~~sp-------------~~~~l~~~~~d~~i~i~d~~~~~----~~~~~~~~~~~v~~~~~~p 328 (446)
.. ..+ .|...|.+++|+| ++.+|++++.++.|++||+++++ .+..+.+|...|.+++|+|
T Consensus 137 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 137 TTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp CCCEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECC
T ss_pred ceeeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECC
Confidence 32 233 3888999999999 69999999999999999998764 4567788999999999999
Q ss_pred C---CCEEEEEeCCCcEEEEEccCCCcc--eEEE--ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 013282 329 N---GVTFATGNQDKTCRIWDLRNLSES--VAVL--KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 329 ~---~~~l~sgs~d~~v~iwd~~~~~~~--~~~~--~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~ 393 (446)
+ +++|++++.||+|++||++..... ...+ ..|...|++++|+|+|++|++++.||.|++|++..+
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9 899999999999999999763222 1222 237889999999999999999999999999998854
No 99
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=3.1e-30 Score=245.20 Aligned_cols=235 Identities=8% Similarity=0.074 Sum_probs=194.4
Q ss_pred eEEEEEe--CC-cEEEEecc---CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCC--CeEEEEEeCCCcEEEE
Q 013282 191 QVSTLAV--KD-KLLVAGGF---QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSG--AVHFTASNNDCGVRDF 262 (446)
Q Consensus 191 ~v~~l~~--~~-~~l~tg~~---dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~--~~~l~s~s~dg~v~iw 262 (446)
.|.+++| ++ .++++|+. ||.|++|++.+..... ....+|...|.++.| +|++ ..+|++++.||.|++|
T Consensus 20 ~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~--~~~~~~~~~v~~~~~--~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 20 TVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKL--LREIEKAKPIKCGTF--GATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp CEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEE--EEEEEESSCEEEEEC--TTCCTTTCCEEEEETTSCEEEE
T ss_pred ceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccc--eeeecccCcEEEEEE--cCCCCCCceEEEecCCCeEEEE
Confidence 6999999 55 45567776 9999999998776432 233367788888877 8983 2379999999999999
Q ss_pred ecCcce-eeEeee-CCCCeeEE------EECCCCCEEEEEecCCcEEEEECCCCc-eEEEecCCCC----ceeEEE----
Q 013282 263 DMGKYQ-LSKHFR-FPWPVNHS------SQSPDGKLLIIVGDNPDGLLVDSMTGK-TIASLCGHLD----FSFASA---- 325 (446)
Q Consensus 263 d~~~~~-~~~~~~-~~~~v~~~------~~sp~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~----~v~~~~---- 325 (446)
|+.+++ ++..+. |...|.++ +|+|++++|++++.++.|++||+++++ ++..+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 999887 777776 88999999 457899999999999999999999887 7777876554 788888
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEcc---CCCEEEEEeCCCeEEEEEcCCCeeEeEee--
Q 013282 326 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS---DGRYMATAEPADFVHVYDVKSGYEKEQEI-- 400 (446)
Q Consensus 326 ~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~---dg~~l~~~~~dg~i~iwd~~~~~~~~~~~-- 400 (446)
|+|++++|++|+.|+.|++||++. .+. .....|...|.+++|+| ++.+|++++.+|.|++||++++.....+.
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~-~~~-~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 253 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRN-MAL-RWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASV 253 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTT-TEE-EEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECcc-Cce-eeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeee
Confidence 788999999999999999999976 444 44467888999999999 99999999999999999998876554444
Q ss_pred ---ccccCeEEEEEcCCCC-cEEEEEecCCcceEE
Q 013282 401 ---DFFGEISGISFSPDTE-SLFIGVWDRTYGSLL 431 (446)
Q Consensus 401 ---~~~~~v~~~~~spdg~-~l~~~~~D~~~~~~l 431 (446)
.|...|.+++|+|+++ +|++++.|+.+..|-
T Consensus 254 ~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd 288 (357)
T 3i2n_A 254 SEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWK 288 (357)
T ss_dssp EEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEE
T ss_pred ccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEee
Confidence 8999999999999998 899999999887664
No 100
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-29 Score=245.14 Aligned_cols=218 Identities=13% Similarity=0.105 Sum_probs=183.5
Q ss_pred eEEEEEe--CCcEE-EEeccCCcEEEEEcC--CCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 191 QVSTLAV--KDKLL-VAGGFQGELICKHLD--RPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 191 ~v~~l~~--~~~~l-~tg~~dg~i~vw~~~--~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
.|.+++| ++++| ++|+.||.|++|++. ....... .....+...+.++.| +|++. +|++++.+|.|++|++.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~v~~~~~--sp~~~-~l~~~~~~g~v~~~~~~ 179 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL-RKRFCFSKRPNAISI--AEDDT-TVIIADKFGDVYSIDIN 179 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEE-EEEEECSSCEEEEEE--CTTSS-EEEEEETTSEEEEEETT
T ss_pred ceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeee-eecccCCCCceEEEE--cCCCC-EEEEEeCCCcEEEEecC
Confidence 6899998 88886 899999999999998 5543321 111355677888877 99997 68999999999999998
Q ss_pred cceeeE----eee-CCCCeeEEEECCC---CCEEEEEecCCcEEEEECCCCceEEE-ecCCCCceeEEEECCCCCEEEEE
Q 013282 266 KYQLSK----HFR-FPWPVNHSSQSPD---GKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATG 336 (446)
Q Consensus 266 ~~~~~~----~~~-~~~~v~~~~~sp~---~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~sg 336 (446)
+++... .+. |...|.+++|+|+ +++|++++.|+.|++||+++++.+.. +.+|...|.+++|+ ++++|++|
T Consensus 180 ~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~ 258 (450)
T 2vdu_B 180 SIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSA 258 (450)
T ss_dssp SCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEE
T ss_pred CcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEE
Confidence 877553 444 8889999999999 99999999999999999999998887 56899999999999 99999999
Q ss_pred eCCCcEEEEEccCCCcceEEEec-------------------------CCCceEEEEEccCCCEEEEEe-CCCeEEEEEc
Q 013282 337 NQDKTCRIWDLRNLSESVAVLKG-------------------------NLGAIRSIRYTSDGRYMATAE-PADFVHVYDV 390 (446)
Q Consensus 337 s~d~~v~iwd~~~~~~~~~~~~~-------------------------~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~ 390 (446)
+.|++|++||+++ ++++..+.. ....|.+++|+|++++|++++ .++.|+||++
T Consensus 259 ~~d~~v~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 259 GGDDKIFAWDWKT-GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp ESSSEEEEEETTT-CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eCCCeEEEEECCC-CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 9999999999976 677777653 235689999999999999999 8999999999
Q ss_pred --CCC---eeEeEeeccccCeEEEEEcCCC
Q 013282 391 --KSG---YEKEQEIDFFGEISGISFSPDT 415 (446)
Q Consensus 391 --~~~---~~~~~~~~~~~~v~~~~~spdg 415 (446)
.++ ..+..+..+ +.|.+++|+|++
T Consensus 338 ~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 338 SEKQKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp CSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred ccCCCCceeeccEeccC-CceEEEEecCCc
Confidence 555 566666666 889999999964
No 101
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3e-29 Score=236.73 Aligned_cols=255 Identities=15% Similarity=0.149 Sum_probs=203.7
Q ss_pred eeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc--eEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 118 RRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR--SQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 118 ~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
..|...|.++.++++.+.++.+ ..++.|++|+..++.. .....+.+|.. .|.++
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~----------------~v~~~ 63 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATC--------SSDQHIKVFKLDKDTSNWELSDSWRAHDS----------------SIVAI 63 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEE--------ETTSEEEEEEECSSSCCEEEEEEEECCSS----------------CEEEE
T ss_pred cccccceeEEEEcCCCCEEEEe--------eCCCeEEEEECCCCCCcceecceeccCCC----------------cEEEE
Confidence 4566678888877765544443 3467889999876543 23333444322 59999
Q ss_pred Ee----CCcEEEEeccCCcEEEEEcCCCCe------eeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEe
Q 013282 196 AV----KDKLLVAGGFQGELICKHLDRPGV------SFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFD 263 (446)
Q Consensus 196 ~~----~~~~l~tg~~dg~i~vw~~~~~~~------~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd 263 (446)
+| ++++|++|+.||.|++|++..... .........|...+.++.+ +|+ +. +|++++.||.|++||
T Consensus 64 ~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~~-~l~~~~~dg~v~iwd 140 (351)
T 3f3f_A 64 DWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKF--APAHLGL-KLACLGNDGILRLYD 140 (351)
T ss_dssp EECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTCEEEEEE
T ss_pred EEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEE--cCCCCCc-EEEEecCCCcEEEec
Confidence 98 389999999999999999987531 1234556678889999888 888 76 699999999999999
Q ss_pred cCcceeeEee--------------eCCCCeeEEEECCC---CCEEEEEecCCcEEEEECCCCce--EEEecCCCCceeEE
Q 013282 264 MGKYQLSKHF--------------RFPWPVNHSSQSPD---GKLLIIVGDNPDGLLVDSMTGKT--IASLCGHLDFSFAS 324 (446)
Q Consensus 264 ~~~~~~~~~~--------------~~~~~v~~~~~sp~---~~~l~~~~~d~~i~i~d~~~~~~--~~~~~~~~~~v~~~ 324 (446)
+.+++.+..+ .+...+.+++|+|+ +..+++++.++.+.+|+...++. +..+.+|...|.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~ 220 (351)
T 3f3f_A 141 ALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSI 220 (351)
T ss_dssp CSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEE
T ss_pred CCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEE
Confidence 9876644332 25667999999997 99999999999998888887765 67788999999999
Q ss_pred EECCCC----CEEEEEeCCCcEEEEEccCC---------------------------------------------CcceE
Q 013282 325 AWHPNG----VTFATGNQDKTCRIWDLRNL---------------------------------------------SESVA 355 (446)
Q Consensus 325 ~~~p~~----~~l~sgs~d~~v~iwd~~~~---------------------------------------------~~~~~ 355 (446)
+|+|++ ++|++|+.||+|++||++.. ...+.
T Consensus 221 ~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (351)
T 3f3f_A 221 SWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLS 300 (351)
T ss_dssp EECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEE
T ss_pred EECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEE
Confidence 999998 89999999999999999752 15667
Q ss_pred EEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEe
Q 013282 356 VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 399 (446)
Q Consensus 356 ~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~ 399 (446)
.+.+|...|++++|+|++++|++|+.||.|++|++.++.....+
T Consensus 301 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 301 EHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp EECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred EEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 77889999999999999999999999999999999987654443
No 102
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.3e-30 Score=252.20 Aligned_cols=225 Identities=9% Similarity=0.067 Sum_probs=170.2
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeee--EEEEeecCCCceeeEEEEeCC--------CCCeEEEEEeCCCcEEEEecCcc
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSF--CSRTTYDDNAITNAVEIYGSP--------SGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~--~~~~~~~~~~~v~~i~~~~s~--------~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
++.+|++|+.|++|++|++....... ....+.+|.+.|++++| +| ++. +|++++.|++|+|||+.++
T Consensus 100 ~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~--~p~~~~~~~~d~~-~las~s~D~tv~~Wd~~~~ 176 (393)
T 4gq1_A 100 YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDI--ADVYSADNRLAEQ-VIASVGDDCTLIIWRLTDE 176 (393)
T ss_dssp EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEE--EEEECTTCSEEEE-EEEEEETTSEEEEEEEETT
T ss_pred CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEE--ccccccccCCCCC-EEEEEECCCeEEEEECCCC
Confidence 77899999999999999998765332 22345789999999998 55 454 7999999999999999876
Q ss_pred eeeE-eeeCCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCceEEEe-------------------------cCCCCc
Q 013282 268 QLSK-HFRFPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASL-------------------------CGHLDF 320 (446)
Q Consensus 268 ~~~~-~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~-------------------------~~~~~~ 320 (446)
.++. .+.|..++.+++|+|++. +|++++.|++|++||+++++..... .+|...
T Consensus 177 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~ 256 (393)
T 4gq1_A 177 GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASS 256 (393)
T ss_dssp EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSS
T ss_pred ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeeccccccc
Confidence 6554 445889999999999874 7999999999999999987654322 357788
Q ss_pred eeEEEEC-CCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEE------------------Ecc--CCCEEEEE
Q 013282 321 SFASAWH-PNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIR------------------YTS--DGRYMATA 379 (446)
Q Consensus 321 v~~~~~~-p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~------------------~s~--dg~~l~~~ 379 (446)
+.+++|+ |+++.|++++.|+++++||++. +.....+..|...+..+. |+| ++.++++|
T Consensus 257 v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sg 335 (393)
T 4gq1_A 257 LANVRWIGSDGSGILAMCKSGAWLRWNLFA-NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAH 335 (393)
T ss_dssp CSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEE
T ss_pred ceeeeeecCCCCEEEEEeCCCCEEEEECcc-CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEE
Confidence 8999987 7999999999999999999965 444455544444333333 333 34467788
Q ss_pred eCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 380 EPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 380 ~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+.||.|++||+.++........|..+|.+++|+|||++||+++.+|.
T Consensus 336 s~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv 382 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSV 382 (393)
T ss_dssp TTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEE
T ss_pred CCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 89999999999999888888889999999999999999999987753
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=2.1e-29 Score=278.12 Aligned_cols=261 Identities=17% Similarity=0.210 Sum_probs=217.3
Q ss_pred EEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe----CCcEEEEeccCCcEEEEEcCCCCe
Q 013282 146 YLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----KDKLLVAGGFQGELICKHLDRPGV 221 (446)
Q Consensus 146 ~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~----~~~~l~tg~~dg~i~vw~~~~~~~ 221 (446)
....++.|.+|+..+++... .+.+|.. .|.+++| ++.++++|+.||.|++|++.+...
T Consensus 674 s~~~d~~v~vwd~~~~~~~~--~~~~~~~----------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~ 735 (1249)
T 3sfz_A 674 TCSADKKVKIWDSATGKLVH--TYDEHSE----------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKEC 735 (1249)
T ss_dssp EEETTSEEEEEETTTCCEEE--EEECCSS----------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSE
T ss_pred EEeCCCeEEEEECCCCceEE--EEcCCCC----------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcch
Confidence 34457889999998885433 3333322 5888888 456899999999999999988753
Q ss_pred eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEee----------------------------
Q 013282 222 SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHF---------------------------- 273 (446)
Q Consensus 222 ~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~---------------------------- 273 (446)
.....+|...|.++.+ +|++. ++++++.||+|++||+.+++....+
T Consensus 736 ---~~~~~~h~~~v~~~~~--sp~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d 809 (1249)
T 3sfz_A 736 ---RNTMFGHTNSVNHCRF--SPDDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSAD 809 (1249)
T ss_dssp ---EEEECCCSSCEEEEEE--CSSTT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTT
T ss_pred ---hheecCCCCCEEEEEE--ecCCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCC
Confidence 3556688999999988 99988 6999999999999999876543332
Q ss_pred ----------------------------eCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEE
Q 013282 274 ----------------------------RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASA 325 (446)
Q Consensus 274 ----------------------------~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~ 325 (446)
.+...|.+++|+|+++++++++.++.|++||+.+++.+..+.+|...|.+++
T Consensus 810 g~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~ 889 (1249)
T 3sfz_A 810 GDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVM 889 (1249)
T ss_dssp SSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEE
Confidence 2456788999999999999999999999999999999999999999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCC----------------------------cceEE--------EecCCCceEEEEE
Q 013282 326 WHPNGVTFATGNQDKTCRIWDLRNLS----------------------------ESVAV--------LKGNLGAIRSIRY 369 (446)
Q Consensus 326 ~~p~~~~l~sgs~d~~v~iwd~~~~~----------------------------~~~~~--------~~~~~~~v~~l~~ 369 (446)
|+|+|++|++++.|++|++|++.... ..+.. ...+...+.+++|
T Consensus 890 ~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 969 (1249)
T 3sfz_A 890 FSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCL 969 (1249)
T ss_dssp ECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEE
T ss_pred ECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEE
Confidence 99999999999999999999974210 00011 1123457999999
Q ss_pred ccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 370 TSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 370 s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
+|+|+++++|+.+|.|++||+.++.....+.+|.+.|.+++|+|+|++|++++.|+.+..|
T Consensus 970 sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw 1030 (1249)
T 3sfz_A 970 SPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW 1030 (1249)
T ss_dssp CTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE
T ss_pred cCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 9999999999999999999999999888888999999999999999999999999987655
No 104
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=250.07 Aligned_cols=193 Identities=17% Similarity=0.085 Sum_probs=168.5
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC--cceeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC
Q 013282 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG 308 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~--~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 308 (446)
.|.++.| +|++..++++++.||.|++||+. +++.+..+. ++..|.+++|+|++++|++++.++.|++|++.++
T Consensus 104 ~v~~~~~--s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~ 181 (450)
T 2vdu_B 104 YIRNLRL--TSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSI 181 (450)
T ss_dssp CEEEEEE--CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSC
T ss_pred ceEEEEE--cCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCc
Confidence 5777777 99998656899999999999998 888777764 6788999999999999999999999999999887
Q ss_pred ceEE----EecCCCCceeEEEECCC---CCEEEEEeCCCcEEEEEccCCCcceEE-EecCCCceEEEEEccCCCEEEEEe
Q 013282 309 KTIA----SLCGHLDFSFASAWHPN---GVTFATGNQDKTCRIWDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 309 ~~~~----~~~~~~~~v~~~~~~p~---~~~l~sgs~d~~v~iwd~~~~~~~~~~-~~~~~~~v~~l~~s~dg~~l~~~~ 380 (446)
+... .+.+|...|.+++|+|+ +++|++|+.|++|++||++. +..+.. +.+|...|++++|+ ++++|++++
T Consensus 182 ~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~ 259 (450)
T 2vdu_B 182 PEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-CFIVDKWLFGHKHFVSSICCG-KDYLLLSAG 259 (450)
T ss_dssp CCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-TTCEEEECCCCSSCEEEEEEC-STTEEEEEE
T ss_pred ccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-CceeeeeecCCCCceEEEEEC-CCCEEEEEe
Confidence 7554 77789999999999999 99999999999999999976 566666 66899999999999 999999999
Q ss_pred CCCeEEEEEcCCCeeEeEeecc-------------------------ccCeEEEEEcCCCCcEEEEE-ecCCcceE
Q 013282 381 PADFVHVYDVKSGYEKEQEIDF-------------------------FGEISGISFSPDTESLFIGV-WDRTYGSL 430 (446)
Q Consensus 381 ~dg~i~iwd~~~~~~~~~~~~~-------------------------~~~v~~~~~spdg~~l~~~~-~D~~~~~~ 430 (446)
.|+.|++||+.+++.+..+..+ ...|.+++|+|++++|++++ .|+.+..|
T Consensus 260 ~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw 335 (450)
T 2vdu_B 260 GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIIL 335 (450)
T ss_dssp SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEE
T ss_pred CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEE
Confidence 9999999999999887776532 34689999999999999998 67666544
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=4.4e-29 Score=244.84 Aligned_cols=223 Identities=15% Similarity=0.216 Sum_probs=200.5
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.|.|+++++++|++|+.||.|++|++.+... ...+.+|.+.|.++.+ ++. +|++|+.||+|++||+.+++.+
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~----~~~-~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNTLEC---KRILTGHTGSVLCLQY----DER-VIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSSCCE---EEEECCCSSCEEEEEC----CSS-EEEEEETTSCEEEEESSSCCEE
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCCCeE---EEEEcCCCCcEEEEEE----CCC-EEEEEcCCCeEEEEECCCCcEE
Confidence 6999999999999999999999999987653 3556688888888865 455 7999999999999999999998
Q ss_pred Eeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceE---EEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEE
Q 013282 271 KHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI---ASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWD 346 (446)
Q Consensus 271 ~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~---~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd 346 (446)
..+. |...|.+++|++ ..+++|+.|+.|++||+.+++.+ ..+.+|...|.+++| ++++|++|+.||+|++||
T Consensus 207 ~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd 282 (435)
T 1p22_A 207 NTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWN 282 (435)
T ss_dssp EEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE
T ss_pred EEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEE
Confidence 8887 888999999974 69999999999999999987765 677889999999999 788999999999999999
Q ss_pred ccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 347 LRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 347 ~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+++ ++.+..+.+|...|.+++| ++++|++|+.||.|++||++++..+..+.+|...|.+++| ++.+|++|+.|+.
T Consensus 283 ~~~-~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~ 357 (435)
T 1p22_A 283 TST-CEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK 357 (435)
T ss_dssp TTT-CCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred CCc-CcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc
Confidence 976 7889999999999999998 4689999999999999999999999999999999999999 6889999999998
Q ss_pred cceE
Q 013282 427 YGSL 430 (446)
Q Consensus 427 ~~~~ 430 (446)
+..|
T Consensus 358 i~vw 361 (435)
T 1p22_A 358 IKVW 361 (435)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8765
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.6e-28 Score=250.71 Aligned_cols=277 Identities=14% Similarity=0.083 Sum_probs=223.9
Q ss_pred cccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCc--eEEEecCCCCCCCCCCCCCccccCccce-EEEEEe
Q 013282 121 SRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSR--SQVLNVSGHVAPSEKHPGSLLEGFTQTQ-VSTLAV 197 (446)
Q Consensus 121 ~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~~~-v~~l~~ 197 (446)
...+.+..++++.+.++. ..++.|.+|+..++.. .....+.+|.. . |.++++
T Consensus 18 ~~~v~~~~~spdg~~l~~---------~~~~~v~v~~~~~~~~~~~~~~~~~~h~~----------------~~v~~~~~ 72 (615)
T 1pgu_A 18 RNFTTHLSYDPTTNAIAY---------PCGKSAFVRCLDDGDSKVPPVVQFTGHGS----------------SVVTTVKF 72 (615)
T ss_dssp TTCCCCCEEETTTTEEEE---------EETTEEEEEECCSSCCSSCSEEEECTTTT----------------SCEEEEEE
T ss_pred cCceeEEEECCCCCEEEE---------ecCCeEEEEECCCCCCccccceEEecCCC----------------ceEEEEEE
Confidence 345666666665544443 3367789999876610 22233343321 5 777777
Q ss_pred ----CCcEEEEeccCCcEEEEEcCCCC-----eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC----CcEEEEec
Q 013282 198 ----KDKLLVAGGFQGELICKHLDRPG-----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDM 264 (446)
Q Consensus 198 ----~~~~l~tg~~dg~i~vw~~~~~~-----~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d----g~v~iwd~ 264 (446)
++++|++|+.||.|++|++.+.. .......+..|...+.++.| +|++. +|++++.+ +.|++||
T Consensus 73 sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--s~~~~-~l~~~~~~~~~~~~v~~~d- 148 (615)
T 1pgu_A 73 SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISW--DFEGR-RLCVVGEGRDNFGVFISWD- 148 (615)
T ss_dssp CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEE--CTTSS-EEEEEECCSSCSEEEEETT-
T ss_pred CcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEE--eCCCC-EEEEeccCCCCccEEEEEE-
Confidence 57999999999999999996441 11234556678888999888 99998 57777777 7899998
Q ss_pred CcceeeEeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCceEEEecCCCC---ceeEEEECCC-CCEEEEEeC
Q 013282 265 GKYQLSKHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGKTIASLCGHLD---FSFASAWHPN-GVTFATGNQ 338 (446)
Q Consensus 265 ~~~~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~v~~~~~~p~-~~~l~sgs~ 338 (446)
.++.+..+. |...|.+++|+|+++ ++++++.++.|++||+.+++.+..+.+|.. .|.+++|+|+ +++|++++.
T Consensus 149 -~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 227 (615)
T 1pgu_A 149 -SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS 227 (615)
T ss_dssp -TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEET
T ss_pred -CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeC
Confidence 555666666 889999999999998 899999999999999999999999999999 9999999999 999999999
Q ss_pred CCcEEEEEccCCCcceEEE-e---cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc----ccCeEEEE
Q 013282 339 DKTCRIWDLRNLSESVAVL-K---GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF----FGEISGIS 410 (446)
Q Consensus 339 d~~v~iwd~~~~~~~~~~~-~---~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~ 410 (446)
|+.|++||++. ++.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+.+++.+..+..+ ...+.++.
T Consensus 228 dg~i~vwd~~~-~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (615)
T 1pgu_A 228 DRKISCFDGKS-GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVV 305 (615)
T ss_dssp TCCEEEEETTT-CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEE
T ss_pred CCeEEEEECCC-CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEE
Confidence 99999999976 7778888 6 899999999999 9999999999999999999999888887766 36788888
Q ss_pred EcCCCCcEEEEEecCCcceE
Q 013282 411 FSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 411 ~spdg~~l~~~~~D~~~~~~ 430 (446)
|+ ++.+|++++.|+.+..|
T Consensus 306 ~~-~~~~l~~~~~~g~i~~~ 324 (615)
T 1pgu_A 306 AT-GNGRIISLSLDGTLNFY 324 (615)
T ss_dssp EE-ETTEEEEEETTSCEEEE
T ss_pred eC-CCCeEEEEECCCCEEEE
Confidence 86 88999999999887544
No 107
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=6.4e-29 Score=253.74 Aligned_cols=278 Identities=17% Similarity=0.158 Sum_probs=225.1
Q ss_pred ceeeeeecccc-ccceeecc--ceeeeEEecccCeEEEecCCeEEEEecCCC------CceEEEecCCCCCCCCCCCCCc
Q 013282 113 SYYEFRRNSRS-VKSTILHF--QLRNLVWATSKHDVYLMSHFSVIHWSSLTS------SRSQVLNVSGHVAPSEKHPGSL 183 (446)
Q Consensus 113 ~~~~f~~~~~~-v~~~~~h~--~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~------~~~~~~~~~g~~~~~~~~~g~~ 183 (446)
....|..+... +.+..+++ ..+.++. ...++.|.+|+..++ .......+.+|.
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s--------~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~---------- 116 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCS--------GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLA---------- 116 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEE--------EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCS----------
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEE--------ecCCCEEEEEeCCCCcccccccccccchhhccc----------
Confidence 44455555555 66666665 4443333 334678899998655 333333443332
Q ss_pred cccCccceEEEEEe--CCcEEEEeccC----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC
Q 013282 184 LEGFTQTQVSTLAV--KDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC 257 (446)
Q Consensus 184 ~~~~~~~~v~~l~~--~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg 257 (446)
..|.+++| ++++|++++.+ +.|.+|+. .. ....+..|...|.++.| +|++..++++++.|+
T Consensus 117 ------~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~--~~---~~~~~~~~~~~v~~~~~--~~~~~~~l~~~~~d~ 183 (615)
T 1pgu_A 117 ------GPISDISWDFEGRRLCVVGEGRDNFGVFISWDS--GN---SLGEVSGHSQRINACHL--KQSRPMRSMTVGDDG 183 (615)
T ss_dssp ------SCEEEEEECTTSSEEEEEECCSSCSEEEEETTT--CC---EEEECCSCSSCEEEEEE--CSSSSCEEEEEETTT
T ss_pred ------ccEEEEEEeCCCCEEEEeccCCCCccEEEEEEC--CC---cceeeecCCccEEEEEE--CCCCCcEEEEEeCCC
Confidence 15888888 89999999988 78888883 32 24566788899999888 999986799999999
Q ss_pred cEEEEecCcceeeEeee-CCC---CeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEe-c---CCCCceeEEEECC
Q 013282 258 GVRDFDMGKYQLSKHFR-FPW---PVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASL-C---GHLDFSFASAWHP 328 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~-~~~---~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~-~---~~~~~v~~~~~~p 328 (446)
.|++||+.+++.+..+. |.. .|.+++|+|+ +++|++++.++.|++||+++++.+..+ . +|...|.+++|+
T Consensus 184 ~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~- 262 (615)
T 1pgu_A 184 SVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL- 262 (615)
T ss_dssp EEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-
T ss_pred cEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-
Confidence 99999999999998888 777 8999999999 999999999999999999999999999 6 899999999999
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCcceEEEecC----CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc
Q 013282 329 NGVTFATGNQDKTCRIWDLRNLSESVAVLKGN----LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 404 (446)
Q Consensus 329 ~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~----~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 404 (446)
++.+|++++.|++|++||++. ++.+..+..+ ...+.++.|+ ++++|++++.+|.|++||+.+++.+..+.+|.+
T Consensus 263 ~~~~l~~~~~d~~i~~wd~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 340 (615)
T 1pgu_A 263 DSQKFATVGADATIRVWDVTT-SKCVQKWTLDKQQLGNQQVGVVAT-GNGRIISLSLDGTLNFYELGHDEVLKTISGHNK 340 (615)
T ss_dssp SSSEEEEEETTSEEEEEETTT-TEEEEEEECCTTCGGGCEEEEEEE-ETTEEEEEETTSCEEEEETTEEEEEEEECCCSS
T ss_pred CCCEEEEEcCCCcEEEEECCC-CcEEEEEcCCCCcccCceeEEEeC-CCCeEEEEECCCCEEEEECCCCcEEEEEeCCCC
Confidence 999999999999999999976 7778888776 3678888885 889999999999999999999888888888888
Q ss_pred CeEEEEEcCCCCcEEEEEecCCcc
Q 013282 405 EISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 405 ~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
.|.+++| |+ |++++.|+.+.
T Consensus 341 ~v~~~~~-~~---l~~~~~dg~i~ 360 (615)
T 1pgu_A 341 GITALTV-NP---LISGSYDGRIM 360 (615)
T ss_dssp CEEEEET-TT---TEEEETTSCEE
T ss_pred CEEEEEe-cC---cEEECCCCeEE
Confidence 8888888 76 66666666554
No 108
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=3.7e-29 Score=239.57 Aligned_cols=193 Identities=9% Similarity=0.085 Sum_probs=157.0
Q ss_pred EEEEEe--CCcEEEE--eccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 192 VSTLAV--KDKLLVA--GGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 192 v~~l~~--~~~~l~t--g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
+.+++| +|++|++ |+.|++|+|||+.+.... ..+ .|.+.|.+++| +|+|+ ++++++ ++.+++|+..++
T Consensus 136 ~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~---~~~-~~~~~V~~v~f--spdg~-~l~s~s-~~~~~~~~~~~~ 207 (365)
T 4h5i_A 136 TKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK---FEI-ETRGEVKDLHF--STDGK-VVAYIT-GSSLEVISTVTG 207 (365)
T ss_dssp EEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE---EEE-ECSSCCCEEEE--CTTSS-EEEEEC-SSCEEEEETTTC
T ss_pred EEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE---EEe-CCCCceEEEEE--ccCCc-eEEecc-ceeEEEEEeccC
Confidence 445555 8998764 457899999999876543 222 36667888887 99998 577776 456777777666
Q ss_pred eeeEeee---CCCCeeEEEECCCCCEEEEEecCC----cEEEEECCCCce----EEEecCCCCceeEEEECCCCCEEEEE
Q 013282 268 QLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNP----DGLLVDSMTGKT----IASLCGHLDFSFASAWHPNGVTFATG 336 (446)
Q Consensus 268 ~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~----~i~i~d~~~~~~----~~~~~~~~~~v~~~~~~p~~~~l~sg 336 (446)
+.+.... |...|.+++|+|+++.+++++.++ .+++|++..+.. ...+.+|...|++++|+|+|++||+|
T Consensus 208 ~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasg 287 (365)
T 4h5i_A 208 SCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLA 287 (365)
T ss_dssp CEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEE
T ss_pred cceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEE
Confidence 6544322 677899999999999999998877 588899876643 34577899999999999999999999
Q ss_pred eCCCcEEEEEccCCCcceEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 013282 337 NQDKTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 337 s~d~~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~ 393 (446)
+.|++|+|||+++ ++++..+ .+|..+|++|+|+|||++||+|+.|++|+||++...
T Consensus 288 s~D~~V~iwd~~~-~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 288 SNDNSIALVKLKD-LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp ETTSCEEEEETTT-TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred cCCCEEEEEECCC-CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999999999976 7777765 789999999999999999999999999999999754
No 109
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.1e-28 Score=232.31 Aligned_cols=277 Identities=11% Similarity=0.024 Sum_probs=198.4
Q ss_pred eeeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE
Q 013282 116 EFRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL 195 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l 195 (446)
.+..+...+.+..++++.+.++.+. +..+++|+..+..........+ ..+.++
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~---------~~~~~iw~~~~~~~~~~~~~~~------------------~~~~~~ 66 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILST---------LKSFEIYNVHPVAHIMSQEMRH------------------LSKVRM 66 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEEC---------SSEEEEEEETTEEEEEEEECSC------------------CCEEEE
T ss_pred ccccCCCceEEEEECCCCCEEEEEc---------CCEEEEEecCCcceeeeeecCC------------------eEEEEE
Confidence 3445566777777777665544433 3346789876553322222211 135555
Q ss_pred EeCCcEE-EEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-eeeEee
Q 013282 196 AVKDKLL-VAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-QLSKHF 273 (446)
Q Consensus 196 ~~~~~~l-~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-~~~~~~ 273 (446)
.++++.+ ++|+.+++|++||+.++... ..+. +...|.++.+ +++. ++++ .++.|++||+.++ +.+..+
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~~~~---~~~~-~~~~v~~v~~--~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~ 136 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKKQDV---SRIK-VDAPVKDLFL--SREF---IVVS-YGDVISVFKFGNPWKRITDD 136 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTTEEE---EEEE-CSSCEEEEEE--CSSE---EEEE-ETTEEEEEESSTTCCBSSCC
T ss_pred cCCCCEEEEEECCccEEEEEECCCCcEE---EEEE-CCCceEEEEE--cCCE---EEEE-EcCEEEEEECCCCceeeEEe
Confidence 5566666 67888899999999877543 2222 4557888877 6653 4433 4789999999987 666665
Q ss_pred eCCCCeeEEEECCCCCEEEE--EecCCcEEEEECCCCc----------------eEEEecCCCCceeEEEECCCCCEEEE
Q 013282 274 RFPWPVNHSSQSPDGKLLII--VGDNPDGLLVDSMTGK----------------TIASLCGHLDFSFASAWHPNGVTFAT 335 (446)
Q Consensus 274 ~~~~~v~~~~~sp~~~~l~~--~~~d~~i~i~d~~~~~----------------~~~~~~~~~~~v~~~~~~p~~~~l~s 335 (446)
.. +...++++| ..+++ |+.+|.|++||+.+++ .+..+.+|.+.|.+++|+|+|++||+
T Consensus 137 ~~--~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s 212 (355)
T 3vu4_A 137 IR--FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVAT 212 (355)
T ss_dssp EE--EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEE
T ss_pred cc--CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEE
Confidence 54 455666777 66666 5789999999999865 26788999999999999999999999
Q ss_pred EeCCCc-EEEEEccCCCcceEEEe-c-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEe--Ee-----------
Q 013282 336 GNQDKT-CRIWDLRNLSESVAVLK-G-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE--QE----------- 399 (446)
Q Consensus 336 gs~d~~-v~iwd~~~~~~~~~~~~-~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~--~~----------- 399 (446)
|+.|++ |+|||+++ ++++..+. + |...|++++|+|+|++|++++.|+.|++||+..+.... .+
T Consensus 213 ~s~d~~~v~iwd~~~-~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 291 (355)
T 3vu4_A 213 CSQDGTIIRVFKTED-GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQS 291 (355)
T ss_dssp EETTCSEEEEEETTT-CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCC
T ss_pred EeCCCCEEEEEECCC-CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeecccccc
Confidence 999998 99999976 78888888 5 99999999999999999999999999999997653111 00
Q ss_pred ---------e-ccccCeEEEEEcCCCCcEEEEEecCCcceEEEEe
Q 013282 400 ---------I-DFFGEISGISFSPDTESLFIGVWDRTYGSLLEYG 434 (446)
Q Consensus 400 ---------~-~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l~~~ 434 (446)
. ........++|+|+|++|++++.||.+..+....
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 292 EWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred ccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 0 0112246799999999999999998876654433
No 110
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.6e-28 Score=236.16 Aligned_cols=293 Identities=12% Similarity=0.093 Sum_probs=196.4
Q ss_pred eeeeccccccceeecc-ceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEE
Q 013282 116 EFRRNSRSVKSTILHF-QLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVST 194 (446)
Q Consensus 116 ~f~~~~~~v~~~~~h~-~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~ 194 (446)
.++.+...+.++.+++ +.+.++.+ ..++.|.+|+..++.....+........... ....+...|.+
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~ 104 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSG--------GSDGVIVLYDLENSSRQSYYTCKAVCSIGRD-----HPDVHRYSVET 104 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEE--------ETTSCEEEEECCCCSSSSCEEECEEEEECTT-----CTTCCSSCEEE
T ss_pred eeeccCCcEEEEEEecCCCCEEEEE--------cCCCeEEEEECCCCcccceEecccccccccc-----ccccCCCcEEE
Confidence 3445666777777777 54444333 3467889999987764333321110000000 00012236999
Q ss_pred EEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCC--CeEEEEEeCCCcEEEEecCccee
Q 013282 195 LAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSG--AVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 195 l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~--~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
++| ++++|++|+.||.|++|++.+.... ... .+...+..+.+ ++.+ ..++++++.++.|++||+.+++.
T Consensus 105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~---~~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~d~~~~~~ 178 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA---DVF-NFEETVYSHHM--SPVSTKHCLVAVGTRGPKVQLCDLKSGSC 178 (408)
T ss_dssp EEECTTCTTCEEEEETTSEEEEEETTTTEEE---EEE-ECSSCEEEEEE--CSSCSSCCEEEEEESSSSEEEEESSSSCC
T ss_pred EEEccCCCcEEEEEeCCCeEEEeeCCCCccc---eec-cCCCceeeeEe--ecCCCCCcEEEEEcCCCeEEEEeCCCcce
Confidence 998 5679999999999999999876433 222 25566777777 5543 23799999999999999999998
Q ss_pred eEeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCCCc-eEEEe---------------cCCCCceeEEEECCCCC
Q 013282 270 SKHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMTGK-TIASL---------------CGHLDFSFASAWHPNGV 331 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~-~~~~~---------------~~~~~~v~~~~~~p~~~ 331 (446)
+..+. |..+|.+++|+|+++ +|++++.++.|++||++++. .+..+ .+|...|.+++|+|+++
T Consensus 179 ~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 258 (408)
T 4a11_B 179 SHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL 258 (408)
T ss_dssp CEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS
T ss_pred eeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC
Confidence 88887 889999999999998 58999999999999998765 44444 56889999999999999
Q ss_pred EEEEEeCCCcEEEEEccCCC----------------------------------------------cceEEEecCCCceE
Q 013282 332 TFATGNQDKTCRIWDLRNLS----------------------------------------------ESVAVLKGNLGAIR 365 (446)
Q Consensus 332 ~l~sgs~d~~v~iwd~~~~~----------------------------------------------~~~~~~~~~~~~v~ 365 (446)
+|++++.|+.|++||+++.. +++..+.+|.+.|+
T Consensus 259 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~ 338 (408)
T 4a11_B 259 HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVD 338 (408)
T ss_dssp EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEE
T ss_pred EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEE
Confidence 99999999999999986422 34566778999999
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCC-CCcEEEEEecCCcceE
Q 013282 366 SIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD-TESLFIGVWDRTYGSL 430 (446)
Q Consensus 366 ~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spd-g~~l~~~~~D~~~~~~ 430 (446)
+++|+|++++|++|+.||.|++||+.+++.+....... ....+.|. ...+.++..++.++.|
T Consensus 339 ~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~W 401 (408)
T 4a11_B 339 CCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDETT---TKSQLNPAFEDAWSSSDEEGGTSAW 401 (408)
T ss_dssp EEEEETTTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred EEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCceE---eccccccccceeecccCccCceeec
Confidence 99999999999999999999999999987665443322 12233332 2334455566666655
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.3e-28 Score=236.73 Aligned_cols=247 Identities=16% Similarity=0.222 Sum_probs=192.7
Q ss_pred eEEec-ccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEE
Q 013282 136 LVWAT-SKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICK 214 (446)
Q Consensus 136 l~~~~-~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw 214 (446)
+.|+. +...+....++.|.+|+..+++ .+..+.+|.. .+.++++++.+|++|+.++.+++|
T Consensus 153 v~fspdg~~lasgs~Dg~v~iWd~~~~~--~~~~~~~h~~----------------~v~~~s~~~~~l~sgs~d~~i~~~ 214 (420)
T 4gga_A 153 VAWIKEGNYLAVGTSSAEVQLWDVQQQK--RLRNMTSHSA----------------RVGSLSWNSYILSSGSRSGHIHHH 214 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTE--EEEEECCCSS----------------CEEEEEEETTEEEEEETTSEEEEE
T ss_pred EEECCCCCEEEEEECCCeEEEEEcCCCc--EEEEEeCCCC----------------ceEEEeeCCCEEEEEeCCCceeEe
Confidence 33444 3334445678899999998874 4445555432 588999999999999999999999
Q ss_pred EcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee----eEee-eCCCCeeEEEECCCC-
Q 013282 215 HLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL----SKHF-RFPWPVNHSSQSPDG- 288 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~----~~~~-~~~~~v~~~~~sp~~- 288 (446)
+....... ...+..|...+..+.+ +|++. .+++++.|+.|++|++.+++. +... .+...|.+++|+|.+
T Consensus 215 d~~~~~~~--~~~~~~h~~~~~~~~~--~~~g~-~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~ 289 (420)
T 4gga_A 215 DVRVAEHH--VATLSGHSQEVCGLRW--APDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQS 289 (420)
T ss_dssp ETTSSSCE--EEEEECCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCT
T ss_pred eeccccee--eEEecccccceeeeee--cCCCC-eeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcc
Confidence 98776543 4566788888888877 89988 699999999999999987653 2333 378899999999955
Q ss_pred CEEEEE--ecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe--CCCcEEEEEccCCCcceEEEecCCCce
Q 013282 289 KLLIIV--GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN--QDKTCRIWDLRNLSESVAVLKGNLGAI 364 (446)
Q Consensus 289 ~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~v 364 (446)
..++++ +.|+.|++||+.+++++..+..| ..+.++.|+|+++.+++++ .|++|+|||+++ .+++..+.+|.+.|
T Consensus 290 ~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-~~~v~~l~gH~~~V 367 (420)
T 4gga_A 290 NVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRV 367 (420)
T ss_dssp TEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCE
T ss_pred cEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCC-CcEEEEEcCCCCCE
Confidence 455554 47899999999999999988855 5688999999999888765 699999999976 78899999999999
Q ss_pred EEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeE
Q 013282 365 RSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS 407 (446)
Q Consensus 365 ~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~ 407 (446)
++++|+|+|++|++|+.|++|+|||+....+......+...+.
T Consensus 368 ~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~ 410 (420)
T 4gga_A 368 LSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKASAA 410 (420)
T ss_dssp EEEEECTTSSCEEEEETTTEEEEECCSCSSCC-----------
T ss_pred EEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccCCcc
Confidence 9999999999999999999999999987655444444443333
No 112
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=1.9e-28 Score=240.08 Aligned_cols=252 Identities=15% Similarity=0.172 Sum_probs=194.3
Q ss_pred eeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCC--------CceEEEecCCCCCCCCCCCCCccccCc
Q 013282 117 FRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTS--------SRSQVLNVSGHVAPSEKHPGSLLEGFT 188 (446)
Q Consensus 117 f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~--------~~~~~~~~~g~~~~~~~~~g~~~~~~~ 188 (446)
...+...+.++.++++...++++ ...++.|.+|+..+. .......+.+|
T Consensus 124 ~~~h~~~v~~l~~~p~~~~~lat-------~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h---------------- 180 (430)
T 2xyi_A 124 KINHEGEVNRARYMPQNACVIAT-------KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGH---------------- 180 (430)
T ss_dssp EEEESSCCSEEEEETTEEEEEEE-------ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECC----------------
T ss_pred EEcCCCcEEEEEECCCCCcEEEE-------ECCCCcEEEEECCCcccccCccccCCCcEEecCC----------------
Confidence 33444556666666543322222 233677899998652 11222222222
Q ss_pred cceEEEEEe--CCc-EEEEeccCCcEEEEEcCCCCe----eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 189 QTQVSTLAV--KDK-LLVAGGFQGELICKHLDRPGV----SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 189 ~~~v~~l~~--~~~-~l~tg~~dg~i~vw~~~~~~~----~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
...|++++| ++. +|++|+.||.|++|++..... .........|...|.++.+ +|.+..+|++++.||.|++
T Consensus 181 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~--~p~~~~~l~s~~~dg~i~i 258 (430)
T 2xyi_A 181 QKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAW--HLLHESLFGSVADDQKLMI 258 (430)
T ss_dssp SSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEE--CSSCTTEEEEEETTSEEEE
T ss_pred CCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEE--eCCCCCEEEEEeCCCeEEE
Confidence 125788888 555 999999999999999987432 1112445578888999888 8966668999999999999
Q ss_pred EecCcc---eeeEeee-CCCCeeEEEECCCCC-EEEEEecCCcEEEEECCC-CceEEEecCCCCceeEEEECCCC-CEEE
Q 013282 262 FDMGKY---QLSKHFR-FPWPVNHSSQSPDGK-LLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNG-VTFA 334 (446)
Q Consensus 262 wd~~~~---~~~~~~~-~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~p~~-~~l~ 334 (446)
||+.++ +.+..+. |...|++++|+|++. +|++|+.+|.|++||+++ ++++..+.+|...|.+++|+|++ .+|+
T Consensus 259 ~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~ 338 (430)
T 2xyi_A 259 WDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILA 338 (430)
T ss_dssp EETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEE
T ss_pred EECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEE
Confidence 999876 4566665 889999999999887 688999999999999997 56788899999999999999988 4799
Q ss_pred EEeCCCcEEEEEccCCC-------------cceEEEecCCCceEEEEEccCCC-EEEEEeCCCeEEEEEcCCC
Q 013282 335 TGNQDKTCRIWDLRNLS-------------ESVAVLKGNLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~-------------~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~~dg~i~iwd~~~~ 393 (446)
+++.|++|+|||++... ..+..+.+|...|++++|+|+++ +|++++.||.|+||++...
T Consensus 339 s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 339 SSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp EEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 99999999999997522 45667778999999999999999 8999999999999998754
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.8e-29 Score=263.00 Aligned_cols=225 Identities=13% Similarity=0.074 Sum_probs=188.9
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|++++| ++++||+|+.||+|+||+...... .....|...|.++.| +| |. +|++++.|++|++||+.+++
T Consensus 19 ~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~----~~~~~~~~~V~~l~f--sp-g~-~L~S~s~D~~v~lWd~~~~~ 90 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV----VIKLEDRSAIKEMRF--VK-GI-YLVVINAKDTVYVLSLYSQK 90 (902)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEECSTTCEE----EEECSSCCCEEEEEE--ET-TT-EEEEEETTCEEEEEETTTCS
T ss_pred CcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE----EEEcCCCCCEEEEEE--cC-CC-EEEEEECcCeEEEEECCCCc
Confidence 5889998 899999999999999999865422 222346778888888 78 66 79999999999999999999
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceE-----------EEecCCCCceeEEEECCC-CCEEEEE
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI-----------ASLCGHLDFSFASAWHPN-GVTFATG 336 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~-----------~~~~~~~~~v~~~~~~p~-~~~l~sg 336 (446)
++..+.+...|++++|+|++++|++|+.||.|++||+++++.. ..+.+|.+.|.+++|+|+ +..|++|
T Consensus 91 ~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g 170 (902)
T 2oaj_A 91 VLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLIS 170 (902)
T ss_dssp EEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCEEEEE
Confidence 9988888889999999999999999999999999999988764 234679999999999995 5789999
Q ss_pred eCCCcEEEEEccCCCcceEEEecC------------------CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE
Q 013282 337 NQDKTCRIWDLRNLSESVAVLKGN------------------LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 337 s~d~~v~iwd~~~~~~~~~~~~~~------------------~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~ 398 (446)
+.|++| +||++. .+++..+..| ...|++++|+|+|++|++|+.||.|++||+++++.+..
T Consensus 171 ~~dg~v-lWd~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~~~ 248 (902)
T 2oaj_A 171 YEYVTL-TYSLVE-NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMIMA 248 (902)
T ss_dssp CSSCEE-EEETTT-TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEEEE
T ss_pred eCCCcE-EEECCC-CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEEEE
Confidence 999999 999976 6777777765 46799999999999999999999999999999876643
Q ss_pred --ee---c-------------cccCeEEEEEc----CCC-CcEEEEEecC
Q 013282 399 --EI---D-------------FFGEISGISFS----PDT-ESLFIGVWDR 425 (446)
Q Consensus 399 --~~---~-------------~~~~v~~~~~s----pdg-~~l~~~~~D~ 425 (446)
+. . |...|.+++|+ |++ ..|++|+.|.
T Consensus 249 r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~ 298 (902)
T 2oaj_A 249 RTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSIS 298 (902)
T ss_dssp ECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECST
T ss_pred EeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCC
Confidence 21 1 24479999995 443 4566776764
No 114
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=5.9e-27 Score=225.98 Aligned_cols=251 Identities=13% Similarity=0.126 Sum_probs=200.5
Q ss_pred cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEE-EEeccCCcEEEEEcCCCCeeeEE
Q 013282 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLL-VAGGFQGELICKHLDRPGVSFCS 225 (446)
Q Consensus 149 ~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l-~tg~~dg~i~vw~~~~~~~~~~~ 225 (446)
.++.|.+|+..+++....+. ++. .+.++++ ++++| ++++.++.|++|++.+....
T Consensus 10 ~d~~v~v~d~~~~~~~~~~~--~~~-----------------~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~--- 67 (391)
T 1l0q_A 10 ESDNISVIDVTSNKVTATIP--VGS-----------------NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVI--- 67 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE--CSS-----------------SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEE---
T ss_pred CCCEEEEEECCCCeEEEEee--cCC-----------------CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEE---
Confidence 46789999998875444333 221 3677777 77766 77889999999999776433
Q ss_pred EEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEE-EEEecCCcEEEEE
Q 013282 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLL-IIVGDNPDGLLVD 304 (446)
Q Consensus 226 ~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i~d 304 (446)
.....+. .+.++.+ +|+++.++++++.++.|++||+.+++.+..+.+...+.+++|+|+++.+ ++++.++.|++||
T Consensus 68 ~~~~~~~-~v~~~~~--spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 68 ATVPAGS-SPQGVAV--SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp EEEECSS-SEEEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred EEEECCC-CccceEE--CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 3333333 6777776 9999976677778899999999999999888877789999999999987 6777899999999
Q ss_pred CCCCceEEEecCCCCceeEEEECCCCCEE-EEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEe---
Q 013282 305 SMTGKTIASLCGHLDFSFASAWHPNGVTF-ATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE--- 380 (446)
Q Consensus 305 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~--- 380 (446)
+.+++.+..+..+ ..+.+++|+|+++++ ++++.++.|++||++. .+.+..+. +...+.+++|+|+|++|++++
T Consensus 145 ~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~ 221 (391)
T 1l0q_A 145 TVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVT-NSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDK 221 (391)
T ss_dssp TTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSEEEEEEECTTSSEEEEEEECS
T ss_pred CCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CeEEEEEe-cCCCccceEECCCCCEEEEEecCc
Confidence 9999999888765 456899999999887 5777899999999976 66666665 456789999999999999888
Q ss_pred CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEE-EecCCcc
Q 013282 381 PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIG-VWDRTYG 428 (446)
Q Consensus 381 ~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~-~~D~~~~ 428 (446)
.++.|++||+.+++.+..+..+. .+.+++|+|+|++|+++ +.|+.+.
T Consensus 222 ~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~ 269 (391)
T 1l0q_A 222 YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVS 269 (391)
T ss_dssp SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEE
Confidence 68999999999998877776554 58899999999988544 5565543
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=6e-27 Score=229.05 Aligned_cols=256 Identities=13% Similarity=0.046 Sum_probs=208.0
Q ss_pred CCeEEEEecCCCCceEEEec---CCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeE
Q 013282 150 HFSVIHWSSLTSSRSQVLNV---SGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFC 224 (446)
Q Consensus 150 ~~~i~~w~~~~~~~~~~~~~---~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~ 224 (446)
++.|.+|+..+++....+.. .+| ...|.++++ +++++++++.+|.|++|++.+....
T Consensus 143 ~~~i~~~d~~~g~~~~~~~~~~~~~~----------------~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~-- 204 (433)
T 3bws_A 143 DEGMDVLDINSGQTVRLSPPEKYKKK----------------LGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK-- 204 (433)
T ss_dssp SSSEEEEETTTCCEEEECCCHHHHTT----------------CCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE--
T ss_pred CCeEEEEECCCCeEeeecCccccccc----------------CCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE--
Confidence 56799999988765433221 122 126888888 8899999999999999999876543
Q ss_pred EEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEe--------c
Q 013282 225 SRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG--------D 296 (446)
Q Consensus 225 ~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--------~ 296 (446)
.....|...+.++.+ +|++..++++++.++.|++||+.+++.+..+.....+.+++|+|+++.+++++ .
T Consensus 205 -~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 205 -ATVDLTGKWSKILLY--DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp -EEEECSSSSEEEEEE--ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred -EEEcCCCCCeeEEEE--cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccC
Confidence 344467777888877 89998666777789999999999999988888777799999999999998887 4
Q ss_pred CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCE-EEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCE
Q 013282 297 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVT-FATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRY 375 (446)
Q Consensus 297 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~-l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~ 375 (446)
++.|++||+.+++.+..+. |...+.+++|+|+++. +++++.++.|++||+.. ++.+..+. +...+.+++|+|+|++
T Consensus 282 dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~-~~~~~~~~-~~~~~~~~~~s~dg~~ 358 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE-KKVQKSIP-VFDKPNTIALSPDGKY 358 (433)
T ss_dssp CEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTT-TEEEEEEE-CSSSEEEEEECTTSSE
T ss_pred CCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCC-CcEEEEec-CCCCCCeEEEcCCCCE
Confidence 8899999999998877663 5668899999999975 46668899999999965 66666665 5678999999999999
Q ss_pred EEEEeC---------------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe-cCCcceE
Q 013282 376 MATAEP---------------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW-DRTYGSL 430 (446)
Q Consensus 376 l~~~~~---------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-D~~~~~~ 430 (446)
|++++. ||.|++||+.+++.+..+.. ...+.+++|+|+|++|++++. |+++..|
T Consensus 359 l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~ 428 (433)
T 3bws_A 359 LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVY 428 (433)
T ss_dssp EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEE
T ss_pred EEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEE
Confidence 988876 57999999999987777664 567999999999999998875 7766544
No 116
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=4.6e-28 Score=223.19 Aligned_cols=254 Identities=13% Similarity=0.065 Sum_probs=182.3
Q ss_pred eEEEecCCeEEEEecCCCC-ceEEEecCCCCCCC---CCCCC--Cc----cccCccceEEEEEe--C----CcEEEEecc
Q 013282 144 DVYLMSHFSVIHWSSLTSS-RSQVLNVSGHVAPS---EKHPG--SL----LEGFTQTQVSTLAV--K----DKLLVAGGF 207 (446)
Q Consensus 144 ~v~~~~~~~i~~w~~~~~~-~~~~~~~~g~~~~~---~~~~g--~~----~~~~~~~~v~~l~~--~----~~~l~tg~~ 207 (446)
.+..+....|.+|+...+. -..+....++-.|. ...++ ++ ++.+....|.++++ + ++++++++.
T Consensus 56 ~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~ 135 (356)
T 2w18_A 56 CIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGN 135 (356)
T ss_dssp EEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEE
T ss_pred EEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCC
Confidence 5677788899999998872 24455555443321 11110 00 22333335555555 4 555666553
Q ss_pred CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEe--CCCcEEEEec-CcceeeEeee-CCCCeeEEE
Q 013282 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN--NDCGVRDFDM-GKYQLSKHFR-FPWPVNHSS 283 (446)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s--~dg~v~iwd~-~~~~~~~~~~-~~~~v~~~~ 283 (446)
+ +.+|.+ ++++ ++.+++ .|+.|++|++ ++++.+..+. |+..+..++
T Consensus 136 ~--~~v~~l---------------------------~~g~-lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~ 185 (356)
T 2w18_A 136 I--KAVLGL---------------------------TKRR-LVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILT 185 (356)
T ss_dssp E--EEEEEE---------------------------TTTE-EEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEE
T ss_pred e--EEEEec---------------------------CCCc-EEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEE
Confidence 3 444432 3332 344432 5899999999 5577777666 888899999
Q ss_pred ECC---CCCEEEEEecCCcEEEEECCCCceEEEecCCC---CceeEEEECCCCCEE------------EEEeCCCcEEEE
Q 013282 284 QSP---DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL---DFSFASAWHPNGVTF------------ATGNQDKTCRIW 345 (446)
Q Consensus 284 ~sp---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---~~v~~~~~~p~~~~l------------~sgs~d~~v~iw 345 (446)
|+| ++.+|++++.|++|+|||+++|++++++.+|. ..+.+++|+|+|.++ ++|+.|++|++|
T Consensus 186 fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 186 FAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp EEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred eeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 999 77999999999999999999999999998754 467778999999886 668889999999
Q ss_pred EccCCCcceEEE-----ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeE-EEEEcCCCCcEE
Q 013282 346 DLRNLSESVAVL-----KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEIS-GISFSPDTESLF 419 (446)
Q Consensus 346 d~~~~~~~~~~~-----~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~-~~~~spdg~~l~ 419 (446)
|..+ ++.+..+ .+|.+.+.+..+ ++.++|+|+.|++|+|||+.+++.+..+.+|...+. .++|+|+|++|+
T Consensus 266 d~~t-gk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~La 342 (356)
T 2w18_A 266 NPKT-TLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLL 342 (356)
T ss_dssp ETTT-TEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEE
T ss_pred ECCC-CEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEE
Confidence 9965 6766655 356655544444 488999999999999999999999999988887655 689999999999
Q ss_pred EEEecCCcceE
Q 013282 420 IGVWDRTYGSL 430 (446)
Q Consensus 420 ~~~~D~~~~~~ 430 (446)
+|+.|++++.|
T Consensus 343 SGS~D~TIklW 353 (356)
T 2w18_A 343 AGQKDGNIFVY 353 (356)
T ss_dssp EECTTSCEEEE
T ss_pred EEECCCcEEEe
Confidence 99999999877
No 117
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=3.2e-28 Score=232.21 Aligned_cols=225 Identities=12% Similarity=0.038 Sum_probs=182.9
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.|.+++| ++++|++|+.+| +++|++...... ... .+. .+..+.+ .++++.++++++.|++|++||+.+++
T Consensus 21 ~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~---~~~-~~~-~~~~~~~--~~~~~~~~~~~~~d~~v~iWd~~~~~ 92 (355)
T 3vu4_A 21 PVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI---MSQ-EMR-HLSKVRM--LHRTNYVAFVTGVKEVVHIWDDVKKQ 92 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE---EEE-ECS-CCCEEEE--CTTSSEEEEECSSTTEEEEEETTTTE
T ss_pred ceEEEEECCCCCEEEEEcCCE-EEEEecCCccee---eee-ecC-CeEEEEE--cCCCCEEEEEECCccEEEEEECCCCc
Confidence 6888888 899999998876 789998754322 111 112 3566666 67777666788899999999999999
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCC-ceEEEecCCCCceeEEEECCCCCEEEE--EeCCCcEEEE
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTG-KTIASLCGHLDFSFASAWHPNGVTFAT--GNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~v~~~~~~p~~~~l~s--gs~d~~v~iw 345 (446)
++..+.+..+|.+++++++. ++++ .++.|++||+.++ +.+..+.. +...++++| .++++ |+.+|+|++|
T Consensus 93 ~~~~~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iw 164 (355)
T 3vu4_A 93 DVSRIKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHIT 164 (355)
T ss_dssp EEEEEECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEE
T ss_pred EEEEEECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEE
Confidence 99999988899999998764 4444 3779999999988 77666654 455567777 56665 6889999999
Q ss_pred EccCCC--------------cc-eEEEecCCCceEEEEEccCCCEEEEEeCCCe-EEEEEcCCCeeEeEee-c-cccCeE
Q 013282 346 DLRNLS--------------ES-VAVLKGNLGAIRSIRYTSDGRYMATAEPADF-VHVYDVKSGYEKEQEI-D-FFGEIS 407 (446)
Q Consensus 346 d~~~~~--------------~~-~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~-i~iwd~~~~~~~~~~~-~-~~~~v~ 407 (446)
|++... .+ +..+.+|.++|++++|+|+|++||+|+.|++ |++||+++++.+..+. + |.+.|.
T Consensus 165 d~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~ 244 (355)
T 3vu4_A 165 KLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVV 244 (355)
T ss_dssp ECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEE
T ss_pred ECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEE
Confidence 997532 12 7889999999999999999999999999998 9999999999998888 5 999999
Q ss_pred EEEEcCCCCcEEEEEecCCcceEE
Q 013282 408 GISFSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 408 ~~~~spdg~~l~~~~~D~~~~~~l 431 (446)
+++|+|+|++|++++.|+++..|-
T Consensus 245 ~~~~s~~~~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 245 DMKWSTDGSKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEECTTSCEEEEEETTCEEEEEE
T ss_pred EEEECCCCCEEEEEECCCEEEEEE
Confidence 999999999999999999887663
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.8e-29 Score=243.38 Aligned_cols=227 Identities=10% Similarity=0.065 Sum_probs=179.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCe-------eeEE--------------------EEeecCCCceeeEEEE
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGV-------SFCS--------------------RTTYDDNAITNAVEIY 241 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~-------~~~~--------------------~~~~~~~~~v~~i~~~ 241 (446)
.|.+++| ||+++|+++.|++|+ +...... .++. .....+...|.+++|
T Consensus 17 ~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~vaw- 93 (588)
T 2j04_A 17 WKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVCKP- 93 (588)
T ss_dssp SSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEEEE-
T ss_pred cEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEEEE-
Confidence 4777777 999999999999995 3222210 0001 011133566777777
Q ss_pred eCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCC-----CeeEEEECCCCCEEEEEecCCcEEEEECCCCc-------
Q 013282 242 GSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW-----PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGK------- 309 (446)
Q Consensus 242 ~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~------- 309 (446)
+|+|. .|++++.||.|++|+..+ ++..+.|.. .+.+++|||+|++|++|+.||+|+|||+.+++
T Consensus 94 -SPdG~-~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i 169 (588)
T 2j04_A 94 -SPIDD-WMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFY 169 (588)
T ss_dssp -CSSSS-CEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCE
T ss_pred -CCCCC-EEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccce
Confidence 99998 699999999999999654 555545433 49999999999999999999999999999886
Q ss_pred eEEEe----cCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCc--ceEEEe-cCCCceEEEEEccCCCEEEEEeCC
Q 013282 310 TIASL----CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE--SVAVLK-GNLGAIRSIRYTSDGRYMATAEPA 382 (446)
Q Consensus 310 ~~~~~----~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~--~~~~~~-~~~~~v~~l~~s~dg~~l~~~~~d 382 (446)
.+..+ .+|..+|.+++|+|+| +++++.|++|++||+..... ..+++. +|...|.+++|+ |+.||+++ +
T Consensus 170 ~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~-~ 244 (588)
T 2j04_A 170 FESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC-P 244 (588)
T ss_dssp EEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC-S
T ss_pred eeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe-C
Confidence 36676 6788899999999999 88889999999999965321 235674 788899999999 68999887 6
Q ss_pred CeEEEEEcCCCeeEeEeeccccCeEEEEE--cCCCCcEEEEEecCCcceE
Q 013282 383 DFVHVYDVKSGYEKEQEIDFFGEISGISF--SPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 383 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~--spdg~~l~~~~~D~~~~~~ 430 (446)
+.|++||+.++.......+|.+.|.+++| +|++..|+++..||+ +.|
T Consensus 245 ~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw 293 (588)
T 2j04_A 245 GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVL 293 (588)
T ss_dssp SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEE
T ss_pred CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEE
Confidence 99999999988764444489999999999 999999999999988 443
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.1e-28 Score=236.20 Aligned_cols=218 Identities=14% Similarity=0.047 Sum_probs=173.2
Q ss_pred cceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCC-----ceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 189 QTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-----ITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 189 ~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-----~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
...|.+++| +|.+||+++.+|+|++|+... +..... |.. .+.+++| ||+|+ +|++|+.||+|++
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~-----~l~~l~-~~~~~~~~sv~svaf--SPDG~-~LAsgs~DGtVkI 155 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK-----MLTNLD-SKGNLSSRTYHCFEW--NPIES-SIVVGNEDGELQF 155 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEETTSCEEEEETTE-----EEEECC-CSSCSTTTCEEEEEE--CSSSS-CEEEEETTSEEEE
T ss_pred CCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc-----eeeecc-CCCccccccEEEEEE--cCCCC-EEEEEcCCCEEEE
Confidence 347999999 999999999999999999533 233444 444 4777777 99998 6999999999999
Q ss_pred EecCccee-------eEeee-----CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCce---EEEe-cCCCCceeEEE
Q 013282 262 FDMGKYQL-------SKHFR-----FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT---IASL-CGHLDFSFASA 325 (446)
Q Consensus 262 wd~~~~~~-------~~~~~-----~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~---~~~~-~~~~~~v~~~~ 325 (446)
||+.++.. +.++. |...|.+++|+|+| +++++.|+.|++||+.+++. ..++ .+|...|.+++
T Consensus 156 Wd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~sva 233 (588)
T 2j04_A 156 FSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLK 233 (588)
T ss_dssp EECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEE
T ss_pred EECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEE
Confidence 99988752 45552 56789999999999 88889999999999988773 3567 47889999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEE--ccCCCEEEEEeCCCeEEEEEcCCC----------
Q 013282 326 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRY--TSDGRYMATAEPADFVHVYDVKSG---------- 393 (446)
Q Consensus 326 ~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~--s~dg~~l~~~~~dg~i~iwd~~~~---------- 393 (446)
|+ |+.||+++ +++|++||+.. +.......+|...|..++| +|++..|++++.+|. ++|....-
T Consensus 234 Fs--g~~LASa~-~~tIkLWd~~~-~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd~~l~a 308 (588)
T 2j04_A 234 IV--DYKVVLTC-PGYVHKIDLKN-YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTADNIIAP 308 (588)
T ss_dssp EE--TTEEEEEC-SSEEEEEETTT-TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECCCSSHH
T ss_pred EE--CCEEEEEe-CCeEEEEECCC-CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCCceEEE
Confidence 99 68999997 69999999964 4443333389999999999 999999999999999 99987421
Q ss_pred -------------eeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 394 -------------YEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 394 -------------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
.... ...+...|.+++|||+|+.+|+++.
T Consensus 309 ~~d~~v~lW~~~g~~l~-~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 309 YLEKKFKKWSTIWNEFN-NYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp HHHHHHHHTTTTTTSSS-SSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred EcCCEEEEEECCCCcee-eeccceEEEEEEECCCCCEEEEEEe
Confidence 0011 1112335899999999999998864
No 120
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5e-28 Score=253.27 Aligned_cols=248 Identities=15% Similarity=0.203 Sum_probs=199.4
Q ss_pred eeeccccccceeeccceeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEE
Q 013282 117 FRRNSRSVKSTILHFQLRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLA 196 (446)
Q Consensus 117 f~~~~~~v~~~~~h~~~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~ 196 (446)
+..|...|.+..++++.+.++. ...++.|.+|+..++.......+.+|.. .|.+++
T Consensus 5 l~gH~~~V~~l~~s~dg~~lat--------g~~dg~I~vwd~~~~~~~~~~~l~~h~~----------------~V~~l~ 60 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLAT--------CSSDKTIKIFEVEGETHKLIDTLTGHEG----------------PVWRVD 60 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEE--------EETTTEEEEEEEETTEEEEEEEECCCSS----------------CEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEE--------EECCCcEEEEecCCCCCccceeccCCcC----------------ceEEEE
Confidence 4566777888877776544433 3446788999987655555556666533 599999
Q ss_pred e--C--CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCC--CCeEEEEEeCCCcEEEEecCcceee
Q 013282 197 V--K--DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 197 ~--~--~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
| + +++|++|+.||.|++|++.++.. ........|...|.++.+ +|+ +. ++++|+.||.|++||+.++...
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~-~~~~~~~~h~~~V~~v~~--sp~~~~~-~l~sgs~dg~I~vwdl~~~~~~ 136 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGRW-SQIAVHAVHSASVNSVQW--APHEYGP-LLLVASSDGKVSVVEFKENGTT 136 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTEE-EEEEEECCCSSCEEEEEE--CCGGGCS-EEEEEETTSEEEEEECCSSSCC
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCcc-cccccccCCCCCeEEEEE--CCCCCCC-EEEEEeCCCcEEEEEeecCCCc
Confidence 8 4 89999999999999999987642 234566778899999988 888 66 7999999999999999876322
Q ss_pred --Eee-eCCCCeeEEEECC-------------CCCEEEEEecCCcEEEEECCCC----ceEEEecCCCCceeEEEECCC-
Q 013282 271 --KHF-RFPWPVNHSSQSP-------------DGKLLIIVGDNPDGLLVDSMTG----KTIASLCGHLDFSFASAWHPN- 329 (446)
Q Consensus 271 --~~~-~~~~~v~~~~~sp-------------~~~~l~~~~~d~~i~i~d~~~~----~~~~~~~~~~~~v~~~~~~p~- 329 (446)
..+ .|...|.+++|+| +++.+++|+.||.|++||++++ ..+..+.+|...|.+++|+|+
T Consensus 137 ~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~ 216 (753)
T 3jro_A 137 SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTV 216 (753)
T ss_dssp CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCC
T ss_pred ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCC
Confidence 223 3888999999999 5899999999999999999877 566778899999999999999
Q ss_pred --CCEEEEEeCCCcEEEEEccCCCc----ceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 013282 330 --GVTFATGNQDKTCRIWDLRNLSE----SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 330 --~~~l~sgs~d~~v~iwd~~~~~~----~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
+++|++|+.||+|++||++.... .......|.+.|++++|+|+|++|++|+.||.|++|++.+
T Consensus 217 ~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 217 LLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp SSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred CCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999999976321 2333445888999999999999999999999999999874
No 121
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.96 E-value=2.4e-26 Score=214.76 Aligned_cols=225 Identities=16% Similarity=0.192 Sum_probs=183.5
Q ss_pred eEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCCeee
Q 013282 144 DVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGVSF 223 (446)
Q Consensus 144 ~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~ 223 (446)
.+....|+.|++|+..+++ .+..+.+|.. .+.++++++..|++|+.++.+++|+.......
T Consensus 82 l~sgs~Dg~v~iw~~~~~~--~~~~~~~h~~----------------~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~- 142 (318)
T 4ggc_A 82 LAVGTSSAEVQLWDVQQQK--RLRNMTSHSA----------------RVGSLSWNSYILSSGSRSGHIHHHDVRVAEHH- 142 (318)
T ss_dssp EEEEETTSEEEEEETTTTE--EEEEEECCSS----------------CEEEEEEETTEEEEEETTSEEEEEETTSSSCE-
T ss_pred EEEEECCCcEEEeecCCce--eEEEecCccc----------------eEEEeecCCCEEEEEecCCceEeeecCCCcee-
Confidence 3444568889999998874 3444444432 47788889999999999999999998776543
Q ss_pred EEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee----E-eeeCCCCeeEEEECCCCCEE---EEEe
Q 013282 224 CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS----K-HFRFPWPVNHSSQSPDGKLL---IIVG 295 (446)
Q Consensus 224 ~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~----~-~~~~~~~v~~~~~sp~~~~l---~~~~ 295 (446)
......|...+..+.+ ++++. +|++++.|+.|++||+.+++.. . ...+...|.++.++|++..+ ++++
T Consensus 143 -~~~~~~~~~~~~~~~~--~~~~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 218 (318)
T 4ggc_A 143 -VATLSGHSQEVCGLRW--APDGR-HLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 218 (318)
T ss_dssp -EEEEECCSSCEEEEEE--CTTSS-EEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECT
T ss_pred -EEEEcCccCceEEEEE--cCCCC-EEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecC
Confidence 4566688888888877 88887 6999999999999999876532 2 22277889999999966533 3456
Q ss_pred cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe--CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCC
Q 013282 296 DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN--QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDG 373 (446)
Q Consensus 296 ~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg 373 (446)
.++.|++||........... +...+..++|+|.+..+++++ .|++|+|||+++ ++++..+.+|.+.|++++|+|+|
T Consensus 219 ~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-~~~~~~l~gH~~~V~~l~~spdg 296 (318)
T 4ggc_A 219 SDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-MAKVAELKGHTSRVLSLTMSPDG 296 (318)
T ss_dssp TTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-CCEEEEECCCSSCEEEEEECTTS
T ss_pred CCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-CcEEEEEcCCCCCEEEEEEcCCC
Confidence 78999999999888776654 677899999999998887765 799999999976 88999999999999999999999
Q ss_pred CEEEEEeCCCeEEEEEcCCC
Q 013282 374 RYMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 374 ~~l~~~~~dg~i~iwd~~~~ 393 (446)
++||+|+.||+|+|||+...
T Consensus 297 ~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 297 ATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SCEEEEETTTEEEEECCSCC
T ss_pred CEEEEEecCCeEEEEECCCC
Confidence 99999999999999998764
No 122
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=3e-27 Score=225.24 Aligned_cols=248 Identities=12% Similarity=0.041 Sum_probs=192.3
Q ss_pred ceeeeeeccccccceeeccce---eeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCcc
Q 013282 113 SYYEFRRNSRSVKSTILHFQL---RNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQ 189 (446)
Q Consensus 113 ~~~~f~~~~~~v~~~~~h~~~---~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 189 (446)
.+..+..+...+.++.+++.. +.++.+ ..++.|++|+..+........+.+|..
T Consensus 31 ~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~--------~~dg~i~iw~~~~~~~~~~~~~~~h~~--------------- 87 (368)
T 3mmy_A 31 DIEVTSSPDDSIGCLSFSPPTLPGNFLIAG--------SWANDVRCWEVQDSGQTIPKAQQMHTG--------------- 87 (368)
T ss_dssp CEECSSCCSSCEEEEEECCTTSSSEEEEEE--------ETTSEEEEEEECTTSCEEEEEEEECSS---------------
T ss_pred eeEeccCCCCceEEEEEcCCCCCceEEEEE--------CCCCcEEEEEcCCCCceeEEEeccccC---------------
Confidence 445566777788888888773 444333 346778999998743333233333322
Q ss_pred ceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 190 TQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 190 ~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.|.+++| ++++|++|+.||.|++|++.+.... ....|...|.++.+..+|++. +|++++.||.|++||+.++
T Consensus 88 -~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~v~~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 88 -PVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI----QIAQHDAPVKTIHWIKAPNYS-CVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp -CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----EEEECSSCEEEEEEEECSSCE-EEEEEETTSEEEEECSSCS
T ss_pred -CEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce----eeccccCceEEEEEEeCCCCC-EEEEccCCCcEEEEECCCC
Confidence 5899998 8899999999999999999876432 244688889999887688876 6999999999999999988
Q ss_pred eeeEeeeCCCC------------------------------------------eeEEEECCCCCE----EEEEecCCcEE
Q 013282 268 QLSKHFRFPWP------------------------------------------VNHSSQSPDGKL----LIIVGDNPDGL 301 (446)
Q Consensus 268 ~~~~~~~~~~~------------------------------------------v~~~~~sp~~~~----l~~~~~d~~i~ 301 (446)
+++..+..... +.++.+.++... +++++.++.|+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~ 241 (368)
T 3mmy_A 162 NPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVA 241 (368)
T ss_dssp SCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEE
T ss_pred cEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEE
Confidence 77666653322 334444433332 89999999999
Q ss_pred EEECCCC---ceEEEecCCCC------------ceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEE
Q 013282 302 LVDSMTG---KTIASLCGHLD------------FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 366 (446)
Q Consensus 302 i~d~~~~---~~~~~~~~~~~------------~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~ 366 (446)
+||++.. +.+..+.+|.. .|.+++|+|++++|++|+.||.|++||++. ++++..+.+|..+|++
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 242 IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-RTKLKTSEQLDQPISA 320 (368)
T ss_dssp EEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-TEEEEECCCCSSCEEE
T ss_pred EEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-CcEEEEecCCCCCceE
Confidence 9999877 56777777765 799999999999999999999999999976 7889999999999999
Q ss_pred EEEccCCCEEEEEeCCCeEEEEEc
Q 013282 367 IRYTSDGRYMATAEPADFVHVYDV 390 (446)
Q Consensus 367 l~~s~dg~~l~~~~~dg~i~iwd~ 390 (446)
++|+|+|++|++|+.|+..+.|++
T Consensus 321 ~~~s~~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEECTTSSCEEEEECCCSTTCGGG
T ss_pred EEECCCCCeEEEEecccccccccc
Confidence 999999999999999886555544
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=2.1e-26 Score=212.20 Aligned_cols=188 Identities=13% Similarity=0.107 Sum_probs=147.9
Q ss_pred CCcEEEEec--cCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-
Q 013282 198 KDKLLVAGG--FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR- 274 (446)
Q Consensus 198 ~~~~l~tg~--~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~- 274 (446)
+++++.+++ .++.|++|++...+.. ......|...+..++|.+.+....+|++++.|++|+|||+.++++++++.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~--~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g 221 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGG--KENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHI 221 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCE--EEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCce--eeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcC
Confidence 556666643 6999999999665433 34445778888888885433334489999999999999999999999987
Q ss_pred C---CCCeeEEEECCCCCEE------------EEEecCCcEEEEECCCCceEEEe-----cCCCCceeEEEECCCCCEEE
Q 013282 275 F---PWPVNHSSQSPDGKLL------------IIVGDNPDGLLVDSMTGKTIASL-----CGHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 275 ~---~~~v~~~~~sp~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~-----~~~~~~v~~~~~~p~~~~l~ 334 (446)
+ ...+.+++|+|+|+++ ++|+.|++|++||..+++.+..+ .+|...+.+.++ ++.++|
T Consensus 222 ~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lA 299 (356)
T 2w18_A 222 DDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAA 299 (356)
T ss_dssp CC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEE
T ss_pred CCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEE
Confidence 3 3467788999999876 55778999999999999988765 367666555444 488999
Q ss_pred EEeCCCcEEEEEccCCCcceEEEecCCCceE-EEEEccCCCEEEEEeCCCeEEEEEc
Q 013282 335 TGNQDKTCRIWDLRNLSESVAVLKGNLGAIR-SIRYTSDGRYMATAEPADFVHVYDV 390 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~-~l~~s~dg~~l~~~~~dg~i~iwd~ 390 (446)
+|+.|++|+|||+.+ +++++++.+|...+. +++|+|||++|++|+.|++|+|||+
T Consensus 300 SgS~DgTIkIWDl~t-Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 300 AILTSGTIAIWDLLL-GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTSCEEEEETTT-CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred EEcCCCcEEEEECCC-CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 999999999999966 889999999987655 5899999999999999999999995
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=1.4e-26 Score=224.00 Aligned_cols=224 Identities=13% Similarity=0.089 Sum_probs=158.8
Q ss_pred EEEecCCeEEEEecCCCCceE---EEecCCCCCCCCCCCCCccccCccceEEEEEe----------CCcEEEEeccCCcE
Q 013282 145 VYLMSHFSVIHWSSLTSSRSQ---VLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV----------KDKLLVAGGFQGEL 211 (446)
Q Consensus 145 v~~~~~~~i~~w~~~~~~~~~---~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~----------~~~~l~tg~~dg~i 211 (446)
+....|++|++|+..++.... +..+.||.. .|.+++| ++++||+|+.|++|
T Consensus 105 as~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~----------------~v~~v~~~p~~~~~~~~d~~~las~s~D~tv 168 (393)
T 4gq1_A 105 ACVCQDNTVRLIITKNETIITQHVLGGKSGHHN----------------FVNDIDIADVYSADNRLAEQVIASVGDDCTL 168 (393)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEEECTTTSCSS----------------CEEEEEEEEEECTTCSEEEEEEEEEETTSEE
T ss_pred EEEeCCCcEEEEECCCCccceeeeecccCCCCC----------------ceEEEEEccccccccCCCCCEEEEEECCCeE
Confidence 344568899999987775432 223445433 5888887 57899999999999
Q ss_pred EEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEee------------------
Q 013282 212 ICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHF------------------ 273 (446)
Q Consensus 212 ~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~------------------ 273 (446)
+|||+.+.... .....|...+.+++| +|++..+|++++.|++|++||+.+++.....
T Consensus 169 ~~Wd~~~~~~~---~~~~~~~~~v~~v~~--~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~ 243 (393)
T 4gq1_A 169 IIWRLTDEGPI---LAGYPLSSPGISVQF--RPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLP 243 (393)
T ss_dssp EEEEEETTEEE---EEEEECSSCEEEEEE--ETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGG
T ss_pred EEEECCCCcee---eeecCCCCCcEEEEE--CCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccc
Confidence 99999776433 344466777888777 8998778999999999999999876543221
Q ss_pred --------eCCCCeeEEEEC-CCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEE------------------EE
Q 013282 274 --------RFPWPVNHSSQS-PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFAS------------------AW 326 (446)
Q Consensus 274 --------~~~~~v~~~~~s-p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~------------------~~ 326 (446)
.+...+.++.|+ |+++.|++++.|+.+++||+.+++....+..|...+..+ .|
T Consensus 244 ~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (393)
T 4gq1_A 244 LVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACP 323 (393)
T ss_dssp GC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEE
T ss_pred ceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEE
Confidence 145567888886 799999999999999999999887766665554444333 34
Q ss_pred CC--CCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 327 HP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 327 ~p--~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
+| ++.++++|+.||+|+|||+.. +.++..+.+|..+|++++|+|||++||+++.+| +.+|.+.
T Consensus 324 ~~~~~~~~~~sgs~Dg~V~lwd~~~-~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 324 HPRYMDYFATAHSQHGLIQLINTYE-KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp CSSCTTEEEEEETTTTEEEEEETTC-TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred ccCCCCEEEEEECCCCEEEEEECCC-CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 44 445678888999999999966 677777888899999999999999999999777 6666543
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=6.7e-25 Score=211.52 Aligned_cols=214 Identities=16% Similarity=0.172 Sum_probs=178.9
Q ss_pred cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCe
Q 013282 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPV 279 (446)
Q Consensus 200 ~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v 279 (446)
.++++++.+|.|++|++.+... ...+..+.. +.++.+ +|++..++++++.|+.|++||+.+++.+..+.....+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~---~~~~~~~~~-~~~~~~--s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV---TATIPVGSN-PMGAVI--SPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE---EEEEECSSS-EEEEEE--CTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEEEcCCCCEEEEEECCCCeE---EEEeecCCC-cceEEE--CCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCc
Confidence 4688999999999999987643 334444543 667766 9999876688889999999999999999999877799
Q ss_pred eEEEECCCCCEEEEEe-cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEE-EEEeCCCcEEEEEccCCCcceEEE
Q 013282 280 NHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF-ATGNQDKTCRIWDLRNLSESVAVL 357 (446)
Q Consensus 280 ~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l-~sgs~d~~v~iwd~~~~~~~~~~~ 357 (446)
.+++|+|++++|++++ .++.|++||+.+++.+..+..+ ..+.+++|+|+++.| ++++.++.|++||++. ++.+..+
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-~~~~~~~ 154 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-KAVINTV 154 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTT-TEEEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCC-CcEEEEE
Confidence 9999999999886554 6799999999999988888754 467999999999977 6888899999999965 6777777
Q ss_pred ecCCCceEEEEEccCCCEE-EEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 358 KGNLGAIRSIRYTSDGRYM-ATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 358 ~~~~~~v~~l~~s~dg~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
..+. .+.+++|+|+|++| ++++.++.|++||+++++....+. +...+.+++|+|+|++|++++.
T Consensus 155 ~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~ 219 (391)
T 1l0q_A 155 SVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNV 219 (391)
T ss_dssp ECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEE
T ss_pred ecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEec
Confidence 7654 57899999999987 567788999999999987766554 5667999999999999999884
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.94 E-value=1.6e-24 Score=210.89 Aligned_cols=221 Identities=13% Similarity=0.104 Sum_probs=172.7
Q ss_pred CcEEEEeccC------CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC---cEEEEecCccee
Q 013282 199 DKLLVAGGFQ------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC---GVRDFDMGKYQL 269 (446)
Q Consensus 199 ~~~l~tg~~d------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg---~v~iwd~~~~~~ 269 (446)
+..++.++.+ +.|++|++..... ..+..|...+.++.| +|+|+ .|++++.++ .|++||+.+++.
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~----~~l~~~~~~v~~~~~--Spdg~-~la~~s~~~~~~~i~~~d~~tg~~ 215 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQ----FVVHRSPQPLMSPAW--SPDGS-KLAYVTFESGRSALVIQTLANGAV 215 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSC----EEEEEESSCEEEEEE--CTTSS-EEEEEECTTSSCEEEEEETTTCCE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCC----EEEeCCCCcceeeEE--cCCCC-EEEEEEecCCCcEEEEEECCCCcE
Confidence 5566666554 7999999975432 333456677888877 99998 577777764 999999999988
Q ss_pred eEeeeCCCCeeEEEECCCCCEEE-EEecCCc--EEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC-CC--cEE
Q 013282 270 SKHFRFPWPVNHSSQSPDGKLLI-IVGDNPD--GLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ-DK--TCR 343 (446)
Q Consensus 270 ~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~--i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~-d~--~v~ 343 (446)
.....+...+.+++|+|+|+.|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|++|++++. ++ .|.
T Consensus 216 ~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 216 RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEE
Confidence 76666888899999999999887 5555554 99999998875 567778889999999999999998886 45 577
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCC---CeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEE
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA---DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFI 420 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d---g~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~ 420 (446)
+||+.. ++ ...+..+...+.+++|+|+|++|++++.+ ..|++||+.+++. ..+..+. .+.+++|+|+|++|++
T Consensus 295 ~~d~~~-~~-~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~ 370 (415)
T 2hqs_A 295 KVNING-GA-PQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIY 370 (415)
T ss_dssp EEETTS-SC-CEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEE
T ss_pred EEECCC-CC-EEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEE
Confidence 778854 33 45566677789999999999999988764 5899999998865 3455454 8999999999999999
Q ss_pred EEecCCcceEE
Q 013282 421 GVWDRTYGSLL 431 (446)
Q Consensus 421 ~~~D~~~~~~l 431 (446)
++.++....+.
T Consensus 371 ~s~~~~~~~l~ 381 (415)
T 2hqs_A 371 SSSQGMGSVLN 381 (415)
T ss_dssp EEEETTEEEEE
T ss_pred EEcCCCccEEE
Confidence 98887543333
No 127
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=4.4e-24 Score=208.70 Aligned_cols=226 Identities=12% Similarity=0.103 Sum_probs=185.0
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEE--EeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR--TTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~--~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
+.++++ ++.++++++.++.|++|++.+........ ....|...+.++.+ ++++. ++++++.|+.|++||+.++
T Consensus 125 ~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~--~~~~~-~~~s~~~d~~v~~~d~~~~ 201 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISI--PEHNE-LWVSQMQANAVHVFDLKTL 201 (433)
T ss_dssp BCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEE--GGGTE-EEEEEGGGTEEEEEETTTC
T ss_pred ceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEE--cCCCE-EEEEECCCCEEEEEECCCc
Confidence 335555 67788888899999999998775432111 23467778888887 88876 7899999999999999999
Q ss_pred eeeEeee-CCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe--------
Q 013282 268 QLSKHFR-FPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-------- 337 (446)
Q Consensus 268 ~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-------- 337 (446)
+.+..+. +...+.+++|+|+++.+++++ .++.|++||+++++.+..+..+ ..+.+++|+|+|+++++++
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 202 AYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp CEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred eEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCcccc
Confidence 9888887 778899999999999885554 7999999999999988888754 5589999999999999988
Q ss_pred CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEE-EEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCC
Q 013282 338 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYM-ATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 416 (446)
Q Consensus 338 ~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l-~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~ 416 (446)
.|+.|++||++. ++.+..+ .|...+.+++|+|+++.+ ++++.++.|++||+.+++....+. +...+.+++|+|+|+
T Consensus 281 ~dg~i~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 281 GGGRLGIYSMDK-EKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGK 357 (433)
T ss_dssp CCEEEEEEETTT-TEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSS
T ss_pred CCCeEEEEECCC-CcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCC
Confidence 488999999975 5555554 455688999999999755 566889999999999988776654 777899999999999
Q ss_pred cEEEEEec
Q 013282 417 SLFIGVWD 424 (446)
Q Consensus 417 ~l~~~~~D 424 (446)
+|++++.+
T Consensus 358 ~l~~~~~~ 365 (433)
T 3bws_A 358 YLYVSCRG 365 (433)
T ss_dssp EEEEEECC
T ss_pred EEEEEecC
Confidence 99988764
No 128
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=3.3e-23 Score=201.68 Aligned_cols=236 Identities=13% Similarity=0.064 Sum_probs=184.7
Q ss_pred CeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCC---cEEEEEcCCCCeeeEE
Q 013282 151 FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQG---ELICKHLDRPGVSFCS 225 (446)
Q Consensus 151 ~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg---~i~vw~~~~~~~~~~~ 225 (446)
+.|.+|+........+....+ .|.+++| +|++|++++.++ .|++|++.++...
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~-------------------~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--- 216 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQ-------------------PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--- 216 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESS-------------------CEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---
T ss_pred ceEEEEcCCCCCCEEEeCCCC-------------------cceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---
Confidence 689999986544333322211 4778887 899999999885 9999999876532
Q ss_pred EEeecCCCceeeEEEEeCCCCCeEEEEEeCCCc--EEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEec-CC--cE
Q 013282 226 RTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG--VRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGD-NP--DG 300 (446)
Q Consensus 226 ~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~--v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~--~i 300 (446)
.+..+...+.++.| +|+|+.++++++.++. |++||+.+++......+...+.+++|+|+|+.|++++. ++ .|
T Consensus 217 -~l~~~~~~~~~~~~--spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i 293 (415)
T 2hqs_A 217 -QVASFPRHNGAPAF--SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQV 293 (415)
T ss_dssp -EEECCSSCEEEEEE--CTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred -EeecCCCcccCEEE--cCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEE
Confidence 23455667777776 9999976667777665 99999998887655557888999999999999988876 44 67
Q ss_pred EEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCC---CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEE
Q 013282 301 LLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD---KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMA 377 (446)
Q Consensus 301 ~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d---~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~ 377 (446)
++||+.+++. ..+..+...+.+++|+|+|++|++++.+ ..|++||+.. ++. ..+..+. .+.+++|+|+|++|+
T Consensus 294 ~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-~~~-~~l~~~~-~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 294 YKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-GGV-QVLSSTF-LDETPSLAPNGTMVI 369 (415)
T ss_dssp EEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-CCE-EECCCSS-SCEEEEECTTSSEEE
T ss_pred EEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-CCE-EEecCCC-CcCCeEEcCCCCEEE
Confidence 8889988764 4455677789999999999999988864 5899999965 443 4566554 899999999999999
Q ss_pred EEeCCC---eEEEEEcCCCeeEeEeeccccCeEEEEEcCCCC
Q 013282 378 TAEPAD---FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE 416 (446)
Q Consensus 378 ~~~~dg---~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~ 416 (446)
+++.++ .|++||+. +.....+..|.+.|.+++|+|...
T Consensus 370 ~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred EEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccccccc
Confidence 888777 79999987 456777888999999999999754
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.4e-23 Score=193.22 Aligned_cols=250 Identities=15% Similarity=0.084 Sum_probs=188.2
Q ss_pred CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCC-CCeeeEEE
Q 013282 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDR-PGVSFCSR 226 (446)
Q Consensus 150 ~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~-~~~~~~~~ 226 (446)
++.|.+|+..+++...+....+ .|.++++ ++++|++++ ++.|++|++.+ .... .
T Consensus 21 ~~~i~~~d~~~~~~~~~~~~~~-------------------~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~---~ 77 (297)
T 2ojh_A 21 RSSIEIFNIRTRKMRVVWQTPE-------------------LFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPE---K 77 (297)
T ss_dssp CEEEEEEETTTTEEEEEEEESS-------------------CCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCE---E
T ss_pred ceeEEEEeCCCCceeeeccCCc-------------------ceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCce---E
Confidence 5678999998876554443321 4777777 899999986 78999999987 5433 3
Q ss_pred EeecC-CCceeeEEEEeCCCCCeEEEEEe--CCCcEEEE--ecCcceeeEeeeCCCCeeEEEECCCCCEEE-EEecCCcE
Q 013282 227 TTYDD-NAITNAVEIYGSPSGAVHFTASN--NDCGVRDF--DMGKYQLSKHFRFPWPVNHSSQSPDGKLLI-IVGDNPDG 300 (446)
Q Consensus 227 ~~~~~-~~~v~~i~~~~s~~~~~~l~s~s--~dg~v~iw--d~~~~~~~~~~~~~~~v~~~~~sp~~~~l~-~~~~d~~i 300 (446)
....+ ...+.++.| +|+++ .|++++ .++.++|| ++.+++ ...+.....+..++|+|+++.|+ +++.++.+
T Consensus 78 ~~~~~~~~~~~~~~~--spdg~-~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~ 153 (297)
T 2ojh_A 78 VDTGFATICNNDHGI--SPDGA-LYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVF 153 (297)
T ss_dssp CCCTTCCCBCSCCEE--CTTSS-EEEEEECTTTSSCEEEEEETTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEE
T ss_pred eccccccccccceEE--CCCCC-EEEEEEeCCCCcceEEEEECCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCce
Confidence 33333 356777777 99998 466666 33445555 555555 34444444589999999999887 67788988
Q ss_pred EEEECC-CCceEEEecCCCCceeEEEECCCCCEEEEEe-CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEE
Q 013282 301 LLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 301 ~i~d~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~ 378 (446)
.||++. .+.....+..+...+.+++|+|+|++|++++ .++.++||++......+..+..|...+.+++|+|+|++|++
T Consensus 154 ~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 233 (297)
T 2ojh_A 154 DIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVF 233 (297)
T ss_dssp EEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEE
Confidence 999853 2334556677888999999999999888776 58999999997446677888888888999999999999988
Q ss_pred EeCC-----------CeEEEEEcCCCee--EeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 379 AEPA-----------DFVHVYDVKSGYE--KEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 379 ~~~d-----------g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
++.+ +.|++||+.+++. +..+..|...+.+++|+|+|++|++++.+..
T Consensus 234 ~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~ 294 (297)
T 2ojh_A 234 VSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFPV 294 (297)
T ss_dssp EEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECCC
T ss_pred EEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEeccC
Confidence 8765 5699999988754 3444477888999999999999999887754
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.92 E-value=1.2e-21 Score=185.68 Aligned_cols=268 Identities=12% Similarity=0.092 Sum_probs=199.6
Q ss_pred eeeEEecccCeEEEec--------CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCc-EEEE
Q 013282 134 RNLVWATSKHDVYLMS--------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDK-LLVA 204 (446)
Q Consensus 134 ~~l~~~~~~~~v~~~~--------~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~-~l~t 204 (446)
..+.++.....+|... ++.|.+|+..+++....+...+. + .-.+++.+++ ++++
T Consensus 44 ~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~---------------~~~~~s~dg~~l~v~ 106 (353)
T 3vgz_A 44 YEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLK--P---------------FGATINNTTQTLWFG 106 (353)
T ss_dssp EEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSC--C---------------CSEEEETTTTEEEEE
T ss_pred cceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCC--c---------------ceEEECCCCCEEEEE
Confidence 3445555555666655 56899999988876555544321 0 1224445777 4556
Q ss_pred eccCCcEEEEEcCCCCeeeEEEEeecCCC---------ceeeEEEEeCCCCCeEEEEE-eCCCcEEEEecCcceeeEeee
Q 013282 205 GGFQGELICKHLDRPGVSFCSRTTYDDNA---------ITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDMGKYQLSKHFR 274 (446)
Q Consensus 205 g~~dg~i~vw~~~~~~~~~~~~~~~~~~~---------~v~~i~~~~s~~~~~~l~s~-s~dg~v~iwd~~~~~~~~~~~ 274 (446)
+..++.|.+|++.+...... ...+.. .+..+.+ +|+++.+++++ +.++.|.+||+.+++.+..+.
T Consensus 107 ~~~~~~v~~~d~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 107 NTVNSAVTAIDAKTGEVKGR---LVLDDRKRTEEVRPLQPRELVA--DDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp ETTTTEEEEEETTTCCEEEE---EESCCCCCCSSCCCCEEEEEEE--ETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred ecCCCEEEEEeCCCCeeEEE---EecCCCccccccCCCCCceEEE--CCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 66689999999987765432 222211 1445555 99998655555 358899999999999998888
Q ss_pred -CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecC----CCCceeEEEECCCCCEEEEEeC-CCcEEEEEcc
Q 013282 275 -FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG----HLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLR 348 (446)
Q Consensus 275 -~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~p~~~~l~sgs~-d~~v~iwd~~ 348 (446)
+...+.+++|+|+++.+++++.++.|.+||+.+++.+..+.. +...+..++|+|+|+++++++. ++.|.+||+.
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 666689999999999999999999999999999998887764 4556788999999998777765 5899999996
Q ss_pred CCCcceEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 349 NLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
+ ++.+..+.... ...++|+|+|+++++++ .++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++..++..
T Consensus 262 ~-~~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~ 337 (353)
T 3vgz_A 262 N-GNILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDT-PTHPNSLALSADGKTLYVSVKQKST 337 (353)
T ss_dssp T-CCEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEEC-CSEEEEEEECTTSCEEEEEEECCCB
T ss_pred C-CcEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEec-CCCCCeEEEcCCCCEEEEEEccccc
Confidence 5 66677766533 35799999999776666 689999999999987766654 4568999999999999888776443
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=5e-22 Score=199.49 Aligned_cols=269 Identities=12% Similarity=0.098 Sum_probs=198.3
Q ss_pred eeeeEEecccCeEEEec-CCeEEEEec--CCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE--Ee----CCcEEE
Q 013282 133 LRNLVWATSKHDVYLMS-HFSVIHWSS--LTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL--AV----KDKLLV 203 (446)
Q Consensus 133 ~~~l~~~~~~~~v~~~~-~~~i~~w~~--~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l--~~----~~~~l~ 203 (446)
.+.+.++.....+|..+ ++.|.+||. .+++....+.. |. .+..+ +. +|++|+
T Consensus 181 ~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~-g~------------------~p~~va~sp~~~~dg~~l~ 241 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI-GI------------------EARSVESSKFKGYEDRYTI 241 (543)
T ss_dssp EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC-CS------------------EEEEEEECCSTTCTTTEEE
T ss_pred cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec-CC------------------CcceEEeCCCcCCCCCEEE
Confidence 34444666556666543 688999998 56543322221 11 23444 44 688998
Q ss_pred Eecc-CCcEEEEEcCCCCeeeEEEEee--------cCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeE--e
Q 013282 204 AGGF-QGELICKHLDRPGVSFCSRTTY--------DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK--H 272 (446)
Q Consensus 204 tg~~-dg~i~vw~~~~~~~~~~~~~~~--------~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~--~ 272 (446)
+++. +++|.+||..+........... +....+..+.+ +|++..++++...++.|.+||+.+.+.+. .
T Consensus 242 v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~--s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~ 319 (543)
T 1nir_A 242 AGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA--SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTS 319 (543)
T ss_dssp EEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE--CSSSSEEEEEETTTTEEEEEECTTSSSCEEEE
T ss_pred EEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEE--CCCCCEEEEEECCCCeEEEEEecCCCcceeEE
Confidence 8884 8999999998776543222211 11224556655 99988888888999999999998766544 4
Q ss_pred eeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCCceEEEecC----CCCceeEEEECCC-CCEEEEEe-CCCcEEEE
Q 013282 273 FRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG----HLDFSFASAWHPN-GVTFATGN-QDKTCRIW 345 (446)
Q Consensus 273 ~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~----~~~~v~~~~~~p~-~~~l~sgs-~d~~v~iw 345 (446)
+.+...+..+.|+|+|++|++++ .+++|.+||+.+++++..+.. |.+....+ ++|+ +.++++++ .|++|.+|
T Consensus 320 i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~ 398 (543)
T 1nir_A 320 IGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLI 398 (543)
T ss_dssp EECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEE
T ss_pred eccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEE
Confidence 55666788999999999876655 588999999999999888874 55444333 4776 67777776 58999999
Q ss_pred EccCC------CcceEEEecCCCceEEEEEccCCCEEEEEe-------CCCeEEEEEcCCCeeEeEe---------eccc
Q 013282 346 DLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAE-------PADFVHVYDVKSGYEKEQE---------IDFF 403 (446)
Q Consensus 346 d~~~~------~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~-------~dg~i~iwd~~~~~~~~~~---------~~~~ 403 (446)
|+... .++++++.+|.+.+..++|+|+|++|++++ .+++|.|||+.+++..... ..+.
T Consensus 399 d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~ 478 (543)
T 1nir_A 399 GTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGA 478 (543)
T ss_dssp ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSC
T ss_pred EeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCC
Confidence 99641 578899999988889999999999999987 2679999999998766333 2346
Q ss_pred cCeEEEEEcCCCCcEEEEEe
Q 013282 404 GEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 404 ~~v~~~~~spdg~~l~~~~~ 423 (446)
..+..+.|+|+|+.|+++.|
T Consensus 479 ~~~~~~~~~~~g~~~~~s~~ 498 (543)
T 1nir_A 479 KRVVQPEYNKRGDEVWFSVW 498 (543)
T ss_dssp CEEEEEEECSSSSEEEEEEE
T ss_pred CceEeccCCCCCCEEEEEee
Confidence 78999999999999998877
No 132
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.91 E-value=1.2e-21 Score=184.80 Aligned_cols=233 Identities=15% Similarity=0.162 Sum_probs=164.1
Q ss_pred EEEEEe--CCcEEEEeccC-CcEEEEEcC--CCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec--
Q 013282 192 VSTLAV--KDKLLVAGGFQ-GELICKHLD--RPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM-- 264 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~d-g~i~vw~~~--~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~-- 264 (446)
+.++++ ++++|++++.+ +.|.+|++. ++.... ......+. .+..+.+ +|+++.+++++..++.|++||+
T Consensus 40 ~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~--s~dg~~l~~~~~~~~~i~~~d~~~ 115 (343)
T 1ri6_A 40 VQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF-AAESALPG-SLTHIST--DHQGQFVFVGSYNAGNVSVTRLED 115 (343)
T ss_dssp CCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE-EEEEECSS-CCSEEEE--CTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee-ccccccCC-CCcEEEE--cCCCCEEEEEecCCCeEEEEECCC
Confidence 444555 88988888876 999999997 333222 22232222 5566666 9999865566666899999999
Q ss_pred -CcceeeEeeeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCC-CceEE----EecC-CCCceeEEEECCCCCEEEEE
Q 013282 265 -GKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMT-GKTIA----SLCG-HLDFSFASAWHPNGVTFATG 336 (446)
Q Consensus 265 -~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~-~~~~~----~~~~-~~~~v~~~~~~p~~~~l~sg 336 (446)
.+.+....+.....+.+++|+|+++++++++ .++.|++||+.+ ++... .+.. ....+..++|+|+|++++++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~ 195 (343)
T 1ri6_A 116 GLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCV 195 (343)
T ss_dssp TEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEE
T ss_pred CccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEE
Confidence 4555666666666799999999999888877 889999999987 65432 2232 33478889999999977655
Q ss_pred e-CCCcEEEEEccCC-Ccc--eEEEec---C---CCceEEEEEccCCCEEEEEe-CCCeEEEEEcC--CC--eeEeEeec
Q 013282 337 N-QDKTCRIWDLRNL-SES--VAVLKG---N---LGAIRSIRYTSDGRYMATAE-PADFVHVYDVK--SG--YEKEQEID 401 (446)
Q Consensus 337 s-~d~~v~iwd~~~~-~~~--~~~~~~---~---~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~--~~--~~~~~~~~ 401 (446)
+ .++.|++|++... +.. ...+.. . ...+..++|+|+|++|+++. .++.|++||+. ++ +.+..+..
T Consensus 196 ~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~ 275 (343)
T 1ri6_A 196 NELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPT 275 (343)
T ss_dssp ETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEEC
T ss_pred eCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecC
Confidence 5 7899999999531 221 222221 1 23566899999999887554 78999999998 33 33333433
Q ss_pred cccCeEEEEEcCCCCcEEEEEe-cCCcce
Q 013282 402 FFGEISGISFSPDTESLFIGVW-DRTYGS 429 (446)
Q Consensus 402 ~~~~v~~~~~spdg~~l~~~~~-D~~~~~ 429 (446)
+ +.+.+++|+|+|++|++++. ++.+..
T Consensus 276 ~-~~~~~~~~s~dg~~l~~~~~~~~~v~v 303 (343)
T 1ri6_A 276 E-TQPRGFNVDHSGKYLIAAGQKSHHISV 303 (343)
T ss_dssp S-SSCCCEEECTTSSEEEEECTTTCEEEE
T ss_pred C-CccceEEECCCCCEEEEecCCCCeEEE
Confidence 3 34889999999999998874 455443
No 133
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.91 E-value=3.4e-21 Score=181.12 Aligned_cols=262 Identities=13% Similarity=0.090 Sum_probs=183.3
Q ss_pred ecccCeEEEe--cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEecc-CCcEEE
Q 013282 139 ATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF-QGELIC 213 (446)
Q Consensus 139 ~~~~~~v~~~--~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~-dg~i~v 213 (446)
......+|.. .++.|.+|+..+++....+..... .+ ++++ ++++|++++. ++.|.+
T Consensus 6 ~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~------------------~~-~~~~s~dg~~l~~~~~~~~~i~~ 66 (331)
T 3u4y_A 6 QTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYD------------------FV-DTAITSDCSNVVVTSDFCQTLVQ 66 (331)
T ss_dssp -CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCC------------------EE-EEEECSSSCEEEEEESTTCEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCC------------------cc-eEEEcCCCCEEEEEeCCCCeEEE
Confidence 3333444443 367899999988866555443210 24 6666 7876665554 899999
Q ss_pred EEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-C--cEEEEecCcceeeEeeeCCCCeeEEEECCCCCE
Q 013282 214 KHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-C--GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKL 290 (446)
Q Consensus 214 w~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-g--~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~ 290 (446)
|++.+.... ......+..+..++.+ +|+|+. ++++..+ + .|++||+.+++.+..+.....+.+++|+|+|++
T Consensus 67 ~d~~~~~~~--~~~~~~~~~~~~~~~~--s~dg~~-l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~ 141 (331)
T 3u4y_A 67 IETQLEPPK--VVAIQEGQSSMADVDI--TPDDQF-AVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNG 141 (331)
T ss_dssp EECSSSSCE--EEEEEECSSCCCCEEE--CTTSSE-EEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSC
T ss_pred EECCCCcee--EEecccCCCCccceEE--CCCCCE-EEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCE
Confidence 999877652 2333344555444666 999985 5555554 3 899999999999988887777899999999986
Q ss_pred EEEE-ecCCc-EEEEECCCCceEE----EecCCCCceeEEEECCCCCEEEEEe-CCCcEEEEEccCCCcc---eEEEecC
Q 013282 291 LIIV-GDNPD-GLLVDSMTGKTIA----SLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSES---VAVLKGN 360 (446)
Q Consensus 291 l~~~-~~d~~-i~i~d~~~~~~~~----~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~~~---~~~~~~~ 360 (446)
++++ ..++. |.+|++.....+. ...........++|+|+|+++++++ .++.|++||+.. ++. +..+..+
T Consensus 142 l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~-~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 142 LILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN-PENITLLNAVGTN 220 (331)
T ss_dssp EEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS-TTSCEEEEEEECS
T ss_pred EEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC-CcccceeeeccCC
Confidence 6554 55688 9999987543321 1123345678999999999665554 689999999965 566 6666653
Q ss_pred CCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCee--EeEeecc----cc---CeEEEEEcCCCCcEEEEEecCC
Q 013282 361 LGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYE--KEQEIDF----FG---EISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 361 ~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~--~~~~~~~----~~---~v~~~~~spdg~~l~~~~~D~~ 426 (446)
..+..++|+|+|++|++++ .++.|.+||+.+++. +..+..+ .. ....++|+|+|++|++++.++.
T Consensus 221 -~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 295 (331)
T 3u4y_A 221 -NLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR 295 (331)
T ss_dssp -SCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT
T ss_pred -CCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC
Confidence 5678999999999877665 477899999999876 3333222 11 2356899999999988877653
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.90 E-value=1.1e-20 Score=189.85 Aligned_cols=246 Identities=13% Similarity=0.079 Sum_probs=185.1
Q ss_pred cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEc--CCCCeeeE
Q 013282 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHL--DRPGVSFC 224 (446)
Q Consensus 149 ~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~--~~~~~~~~ 224 (446)
.++.|.+||..+++....+.. |+ .+.++++ ++++|++++.+++|.+||+ .+...
T Consensus 157 ~d~~V~v~D~~t~~~~~~i~~-g~------------------~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~--- 214 (543)
T 1nir_A 157 DAGQIALVDGDSKKIVKVIDT-GY------------------AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTK--- 214 (543)
T ss_dssp GGTEEEEEETTTCCEEEEEEC-ST------------------TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEE---
T ss_pred CCCeEEEEECCCceEEEEEec-Cc------------------ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcE---
Confidence 367889999988865544432 11 1445555 9999999999999999999 54432
Q ss_pred EEEeecCCCceeeEEEEeCC----CCCeEEEEEeCCCcEEEEecCcceeeEeeeC------------CCCeeEEEECCCC
Q 013282 225 SRTTYDDNAITNAVEIYGSP----SGAVHFTASNNDCGVRDFDMGKYQLSKHFRF------------PWPVNHSSQSPDG 288 (446)
Q Consensus 225 ~~~~~~~~~~v~~i~~~~s~----~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------------~~~v~~~~~sp~~ 288 (446)
...+. +...+..+.| +| +|+.+++++..+++|.+||..+++++..+.. ...+..+.++|++
T Consensus 215 ~~~i~-~g~~p~~va~--sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~ 291 (543)
T 1nir_A 215 VAEIK-IGIEARSVES--SKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEH 291 (543)
T ss_dssp EEEEE-CCSEEEEEEE--CCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSS
T ss_pred EEEEe-cCCCcceEEe--CCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCC
Confidence 23333 3344566666 99 9985444444689999999999998887752 2268899999977
Q ss_pred CEE-EEEecCCcEEEEECCCCceEE--EecCCCCceeEEEECCCCCEEEEEe-CCCcEEEEEccCCCcceEEEec----C
Q 013282 289 KLL-IIVGDNPDGLLVDSMTGKTIA--SLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKG----N 360 (446)
Q Consensus 289 ~~l-~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~~~~~~~~~----~ 360 (446)
..+ ++...++.|.+||+.+++.+. .+. +...+..++|+|+|++|++++ .+++|.+||+.+ ++++..+.. |
T Consensus 292 ~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~t-g~l~~~i~~g~~ph 369 (543)
T 1nir_A 292 PEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKD-RRLSALVDVGKTPH 369 (543)
T ss_dssp SEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTT-TEEEEEEECSSSBC
T ss_pred CEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCC-CeEEEeeccCCCCC
Confidence 655 556678999999998766544 443 566788899999999877665 588999999976 777777764 5
Q ss_pred CCceEEEEEccC-CCEEEEEe-CCCeEEEEEcCC-------CeeEeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 361 LGAIRSIRYTSD-GRYMATAE-PADFVHVYDVKS-------GYEKEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 361 ~~~v~~l~~s~d-g~~l~~~~-~dg~i~iwd~~~-------~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
.+....+ ++|+ |+.++++. .+++|.+||+.+ ++.+..+..|.+.+..++|+|+|++|++++
T Consensus 370 ~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~ 439 (543)
T 1nir_A 370 PGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDT 439 (543)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECC
T ss_pred CCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEec
Confidence 4433333 4677 66667765 579999999998 788899998888889999999999999986
No 135
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.89 E-value=9.2e-21 Score=178.14 Aligned_cols=218 Identities=14% Similarity=0.099 Sum_probs=168.5
Q ss_pred cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCC-ceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCC-
Q 013282 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA-ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPW- 277 (446)
Q Consensus 200 ~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~-~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~- 277 (446)
++|++++.++.|.+||+.+..... .+..++.. .+..+.+ +|+|+.++++++.++.|.+||+.+++.+..+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~--s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~ 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDK--VITIADAGPTPMVPMV--APGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE--EEECTTCTTCCCCEEE--CTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEE--EEEcCCCCCCccceEE--cCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc
Confidence 578999999999999998764432 22222211 3566766 99998777788888999999999999888777433
Q ss_pred -----CeeEEEECCCCCEEEEEe------------cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCC
Q 013282 278 -----PVNHSSQSPDGKLLIIVG------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 278 -----~v~~~~~sp~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
.+.+++|+|+|++|+++. .++.|.+||+.+++.+..+.. ...+.+++|+|+|++|+++ ++
T Consensus 78 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~ 154 (337)
T 1pby_B 78 EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GR 154 (337)
T ss_dssp TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SS
T ss_pred ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CC
Confidence 678899999999998886 579999999999988877764 4457889999999988888 68
Q ss_pred cEEEEEccCCCcceEEEec-------------------------------------------------------------
Q 013282 341 TCRIWDLRNLSESVAVLKG------------------------------------------------------------- 359 (446)
Q Consensus 341 ~v~iwd~~~~~~~~~~~~~------------------------------------------------------------- 359 (446)
.|.+||+.. ++.+..+..
T Consensus 155 ~i~~~d~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~ 233 (337)
T 1pby_B 155 DLHVMDPEA-GTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAM 233 (337)
T ss_dssp SEEEEETTT-TEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEE
T ss_pred eEEEEECCC-CcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceE
Confidence 899999864 443333221
Q ss_pred -----CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcc
Q 013282 360 -----NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 360 -----~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
+...+.+++|+|+|++|+++ ++.|++||+.+++.+..+. ....+.+++|+|+|++|++++.++.+.
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~i~ 304 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVP-LPHSYYSVNVSTDGSTVWLGGALGDLA 304 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSCEEEEESBSSEEE
T ss_pred eecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceec-CCCceeeEEECCCCCEEEEEcCCCcEE
Confidence 11234568999999999988 7899999999988776655 345688999999999999887665543
No 136
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=1.7e-21 Score=190.49 Aligned_cols=229 Identities=11% Similarity=0.038 Sum_probs=163.8
Q ss_pred EEEEEeCCcEEEEeccCCcEEEEEcCCC----------Ceee--EEEEeecCCCceeeEEEEeCCCCCeEEE----EEeC
Q 013282 192 VSTLAVKDKLLVAGGFQGELICKHLDRP----------GVSF--CSRTTYDDNAITNAVEIYGSPSGAVHFT----ASNN 255 (446)
Q Consensus 192 v~~l~~~~~~l~tg~~dg~i~vw~~~~~----------~~~~--~~~~~~~~~~~v~~i~~~~s~~~~~~l~----s~s~ 255 (446)
..+++.++.+|++|+.+| +++|+.... .... .......+...|.+++| +|+|+. |+ +++.
T Consensus 41 ~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~--spdg~~-lav~~~sgs~ 116 (434)
T 2oit_A 41 LLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL--SCDNLT-LSACMMSSEY 116 (434)
T ss_dssp CEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE--CTTSCE-EEEEEEETTT
T ss_pred EEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE--cCCCCE-EEEEEeccCC
Confidence 444455889999999988 888875311 0000 00111234556788877 999985 55 7889
Q ss_pred CCcEEEEecCcc--------ee---eEeee-CCCCeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEecCCCCcee
Q 013282 256 DCGVRDFDMGKY--------QL---SKHFR-FPWPVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSF 322 (446)
Q Consensus 256 dg~v~iwd~~~~--------~~---~~~~~-~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 322 (446)
|+.|++||+.++ ++ +..+. |...|.+++|+|+ +.+|++++.||+|++||++++..+....+|...|.
T Consensus 117 d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~ 196 (434)
T 2oit_A 117 GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAVT 196 (434)
T ss_dssp EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCEE
T ss_pred CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCcee
Confidence 999999998765 22 23333 6889999999997 88999999999999999999987777778999999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecC-------CCceEEEEEccCCCEEEEEe-CCC------eEEEE
Q 013282 323 ASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-------LGAIRSIRYTSDGRYMATAE-PAD------FVHVY 388 (446)
Q Consensus 323 ~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~-------~~~v~~l~~s~dg~~l~~~~-~dg------~i~iw 388 (446)
+++|+|+|++|++|+.||+|++||++ +.....+..| ...|.+++|++++.++++.+ .+| .+++|
T Consensus 197 ~v~wspdg~~lasgs~dg~v~iwd~~--~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~ 274 (434)
T 2oit_A 197 SVCWSPKGKQLAVGKQNGTVVQYLPT--LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMA 274 (434)
T ss_dssp EEEECTTSSCEEEEETTSCEEEECTT--CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEE
T ss_pred EEEEcCCCCEEEEEcCCCcEEEEccC--CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEE
Confidence 99999999999999999999999996 3445555443 23799999999988876533 443 39999
Q ss_pred EcCCCe-----eEeEeec-------cccCeEEEEEcCCCCcEEEEEecCC
Q 013282 389 DVKSGY-----EKEQEID-------FFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 389 d~~~~~-----~~~~~~~-------~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
++++.. ....+.. ...+-.-+.+-++.+++++++....
T Consensus 275 ~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~ 324 (434)
T 2oit_A 275 LLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAAST 324 (434)
T ss_dssp ECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCS
T ss_pred EeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCC
Confidence 998642 1111111 1122223344488888888766554
No 137
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=2.1e-20 Score=194.33 Aligned_cols=261 Identities=12% Similarity=0.084 Sum_probs=185.6
Q ss_pred eEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEE--EEEeCCcEEEEeccCCcEEE
Q 013282 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVS--TLAVKDKLLVAGGFQGELIC 213 (446)
Q Consensus 136 l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~--~l~~~~~~l~tg~~dg~i~v 213 (446)
+.++.. ..+.+..++.+.+|+..+++...+....+ .+. +++++|++|+++ .++.|++
T Consensus 87 ~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------------------~~~~~~~SpdG~~la~~-~~~~i~v 145 (706)
T 2z3z_A 87 TLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNE-------------------ETASLDFSPVGDRVAYV-RNHNLYI 145 (706)
T ss_dssp EEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTT-------------------CCTTCEECTTSSEEEEE-ETTEEEE
T ss_pred EEECCC-CeEEEEECCEEEEEECCCCceEEccCCcc-------------------cccCCcCCCCCCEEEEE-ECCeEEE
Confidence 334444 44555556899999998775444332221 122 344589999985 7899999
Q ss_pred EEcCC-----CCeeeEEEEeecCCCc--------------eeeEEEEeCCCCCeEEEEEe--------------------
Q 013282 214 KHLDR-----PGVSFCSRTTYDDNAI--------------TNAVEIYGSPSGAVHFTASN-------------------- 254 (446)
Q Consensus 214 w~~~~-----~~~~~~~~~~~~~~~~--------------v~~i~~~~s~~~~~~l~s~s-------------------- 254 (446)
|++.+ +... ..+..+... +..+.| +|+|+. |++++
T Consensus 146 ~~~~~~~~~~g~~~---~~~~~~~~~~~~g~~~~~ee~~~~~~~~~--SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~ 219 (706)
T 2z3z_A 146 ARGGKLGEGMSRAI---AVTIDGTETLVYGQAVHQREFGIEKGTFW--SPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAE 219 (706)
T ss_dssp EECBCTTSCCCCCE---ESCSCCBTTEEESSCCGGGCTTCCCSEEE--CTTSSE-EEEEEEECTTSCCEEEEECCSSSCE
T ss_pred EecCcccccCCCcE---EeccCCCCCeEcccchhhhhcCCCceEEE--CCCCCE-EEEEEECCCCCceEEeeccCCCCCc
Confidence 99987 5432 222222221 355655 999985 55555
Q ss_pred -------------CCCcEEEEecCcceeeEeee---CCCCeeEEEECCCCCEEEEEecCC-----cEEEEECCCCceEEE
Q 013282 255 -------------NDCGVRDFDMGKYQLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNP-----DGLLVDSMTGKTIAS 313 (446)
Q Consensus 255 -------------~dg~v~iwd~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~-----~i~i~d~~~~~~~~~ 313 (446)
.+..|++||+.+++...... +...+.+++|+|+|+.|++++.++ .|++||+.+++....
T Consensus 220 ~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~ 299 (706)
T 2z3z_A 220 SKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRT 299 (706)
T ss_dssp EEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEE
T ss_pred eEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeE
Confidence 44779999999988765542 456789999999999999887765 899999999844443
Q ss_pred ec--CCCC---ceeEEEECC--CCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEE-EEEccCCCEEEEEeCC-C-
Q 013282 314 LC--GHLD---FSFASAWHP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS-IRYTSDGRYMATAEPA-D- 383 (446)
Q Consensus 314 ~~--~~~~---~v~~~~~~p--~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~-l~~s~dg~~l~~~~~d-g- 383 (446)
+. .+.. .+.+++|+| +|+++++++.++.++||.+...+..+..+..+...+.+ ++|+|+|+.|+.++.+ +
T Consensus 300 ~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~ 379 (706)
T 2z3z_A 300 LFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASP 379 (706)
T ss_dssp EEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCT
T ss_pred EEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCC
Confidence 32 2222 346789999 99999999999999999986446677788888777876 7999999988766554 3
Q ss_pred ---eEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 384 ---FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 384 ---~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.|..||+.++. ...+ .+...+.+++|+|+|++|+++..+.
T Consensus 380 ~~~~l~~~d~~~~~-~~~l-~~~~~~~~~~~spdg~~l~~~~~~~ 422 (706)
T 2z3z_A 380 LERHFYCIDIKGGK-TKDL-TPESGMHRTQLSPDGSAIIDIFQSP 422 (706)
T ss_dssp TCBEEEEEETTCCC-CEES-CCSSSEEEEEECTTSSEEEEEEECS
T ss_pred ceEEEEEEEcCCCC-ceec-cCCCceEEEEECCCCCEEEEEecCC
Confidence 67777887765 3333 3667799999999999988775544
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=3.9e-21 Score=200.96 Aligned_cols=231 Identities=8% Similarity=0.005 Sum_probs=173.7
Q ss_pred eEEEEEe--CCcEEEEecc-CC-----cEEEEEcCCCCeeeEEEEeecCC------------------------CceeeE
Q 013282 191 QVSTLAV--KDKLLVAGGF-QG-----ELICKHLDRPGVSFCSRTTYDDN------------------------AITNAV 238 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~-dg-----~i~vw~~~~~~~~~~~~~~~~~~------------------------~~v~~i 238 (446)
.+.+++| +|++|++++. +| .|++|++.++... .+...+. ..+..+
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTR---LLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEE---EEECGGGTC--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCcee---EccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 5777777 9999999998 88 8999999877543 2222221 225566
Q ss_pred EEEeCCCCCeEEEEEeCCCcEEEEecCcc---eeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec
Q 013282 239 EIYGSPSGAVHFTASNNDCGVRDFDMGKY---QLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC 315 (446)
Q Consensus 239 ~~~~s~~~~~~l~s~s~dg~v~iwd~~~~---~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 315 (446)
.| +|+|+. |++++. +.|++||+.++ +......+...+.+++|||||++|++++. +.|++||+.+++......
T Consensus 115 ~~--SpDg~~-l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~~~~~~~ 189 (741)
T 2ecf_A 115 QW--SPDAQR-LLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGRQMQLTA 189 (741)
T ss_dssp EE--CTTSSE-EEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTEEEECCC
T ss_pred EE--CCCCCE-EEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCCEEEecc
Confidence 66 999985 555554 99999999988 55554557788999999999999998875 589999999887765554
Q ss_pred CCCCc----------------eeEEEECCCCCEEEEEeCCC---------------------------------cEEEEE
Q 013282 316 GHLDF----------------SFASAWHPNGVTFATGNQDK---------------------------------TCRIWD 346 (446)
Q Consensus 316 ~~~~~----------------v~~~~~~p~~~~l~sgs~d~---------------------------------~v~iwd 346 (446)
.+... +.+++|+|+|++|++++.|+ .|.+||
T Consensus 190 ~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d 269 (741)
T 2ecf_A 190 DGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVIS 269 (741)
T ss_dssp CCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEEC
T ss_pred CCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEE
Confidence 44332 47899999999999998765 788999
Q ss_pred ccCCCcceEEEe--cCCCceEEEEEccCCCEEEEEeC-----CCeEEEEEcCCCeeEeEeecccc----CeEEEEEcCCC
Q 013282 347 LRNLSESVAVLK--GNLGAIRSIRYTSDGRYMATAEP-----ADFVHVYDVKSGYEKEQEIDFFG----EISGISFSPDT 415 (446)
Q Consensus 347 ~~~~~~~~~~~~--~~~~~v~~l~~s~dg~~l~~~~~-----dg~i~iwd~~~~~~~~~~~~~~~----~v~~~~~spdg 415 (446)
+...++...... .|...+.+++| |||++|++++. +..|++||+.+++....+..+.. .+..++|+|||
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg 348 (741)
T 2ecf_A 270 PAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDG 348 (741)
T ss_dssp SSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTS
T ss_pred CCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCC
Confidence 854133333322 46778999999 99999987764 56799999999977665555443 45689999999
Q ss_pred CcEEEEEecCCcceE
Q 013282 416 ESLFIGVWDRTYGSL 430 (446)
Q Consensus 416 ~~l~~~~~D~~~~~~ 430 (446)
++++++..|+....+
T Consensus 349 ~~~~~~~~~g~~~l~ 363 (741)
T 2ecf_A 349 SILWSSERTGFQHLY 363 (741)
T ss_dssp CEEEEECTTSSCEEE
T ss_pred eEEEEecCCCccEEE
Confidence 988888777764433
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=5.7e-21 Score=175.67 Aligned_cols=212 Identities=19% Similarity=0.237 Sum_probs=163.6
Q ss_pred EeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ceeeEeee-C-CCCee
Q 013282 204 AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFR-F-PWPVN 280 (446)
Q Consensus 204 tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~-~-~~~v~ 280 (446)
.++.++.|++|++.+.... .+..|...+.++.+ +|+|+ +|++++ ++.|++||+.+ ++...... + ...+.
T Consensus 17 ~~~~~~~i~~~d~~~~~~~----~~~~~~~~v~~~~~--spdg~-~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR----VVWQTPELFEAPNW--SPDGK-YLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE----EEEEESSCCEEEEE--CTTSS-EEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CCCcceeEEEEeCCCCcee----eeccCCcceEeeEE--CCCCC-EEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 4568899999999776432 22345677888877 99998 466664 78999999998 87776665 3 36789
Q ss_pred EEEECCCCCEEEEEec--C--CcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEE-EEeCCCcEEEEEccCCCcceE
Q 013282 281 HSSQSPDGKLLIIVGD--N--PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFA-TGNQDKTCRIWDLRNLSESVA 355 (446)
Q Consensus 281 ~~~~sp~~~~l~~~~~--d--~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-sgs~d~~v~iwd~~~~~~~~~ 355 (446)
+++|+|++++|++++. + ..|.++++.+++ ...+..+. .+..++|+|++++|+ +++.++.++||++........
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~ 166 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVET 166 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcce
Confidence 9999999999999983 3 345555555554 44454333 488999999999887 778899999999754445566
Q ss_pred EEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcC-CCeeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 356 VLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVK-SGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 356 ~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~-~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.+..+...+.+++|+|+|++|++++ .++.++||++. .+.....+..+...+..++|+|+|++|++++.++
T Consensus 167 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~ 238 (297)
T 2ojh_A 167 RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDA 238 (297)
T ss_dssp ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEET
T ss_pred EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCC
Confidence 7777888999999999999888766 58899999886 4556666777778899999999999999988874
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.88 E-value=7.2e-20 Score=173.38 Aligned_cols=223 Identities=12% Similarity=0.044 Sum_probs=175.4
Q ss_pred EEEEEe--CCcEEEEecc-------CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEE
Q 013282 192 VSTLAV--KDKLLVAGGF-------QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDF 262 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~-------dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iw 262 (446)
+..+++ ++++|++++. ++.|.+||+.+........ . ...+..+.+ +|+|+.+++++..++.|.+|
T Consensus 43 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~---~-~~~~~~~~~--s~dg~~l~v~~~~~~~v~~~ 116 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH---N-DLKPFGATI--NNTTQTLWFGNTVNSAVTAI 116 (353)
T ss_dssp EEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE---E-SSCCCSEEE--ETTTTEEEEEETTTTEEEEE
T ss_pred ccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe---c-CCCcceEEE--CCCCCEEEEEecCCCEEEEE
Confidence 555666 7778877764 5789999998776443222 1 223556666 89998777777788999999
Q ss_pred ecCcceeeEeeeCCC----------CeeEEEECCCCCEEEEEe--cCCcEEEEECCCCceEEEecCCCCceeEEEECCCC
Q 013282 263 DMGKYQLSKHFRFPW----------PVNHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNG 330 (446)
Q Consensus 263 d~~~~~~~~~~~~~~----------~v~~~~~sp~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~ 330 (446)
|+.+++.+..+.... .+.+++|+|+++++++++ .++.|.+||+.+++.+..+..+...+.+++|+|+|
T Consensus 117 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg 196 (353)
T 3vgz_A 117 DAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEG 196 (353)
T ss_dssp ETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTT
T ss_pred eCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCC
Confidence 999999888877322 268899999999887776 47889999999999998887666668899999999
Q ss_pred CEEEEEeCCCcEEEEEccCCCcceEEEec----CCCceEEEEEccCCCEEEEEeCC-CeEEEEEcCCCeeEeEeeccccC
Q 013282 331 VTFATGNQDKTCRIWDLRNLSESVAVLKG----NLGAIRSIRYTSDGRYMATAEPA-DFVHVYDVKSGYEKEQEIDFFGE 405 (446)
Q Consensus 331 ~~l~sgs~d~~v~iwd~~~~~~~~~~~~~----~~~~v~~l~~s~dg~~l~~~~~d-g~i~iwd~~~~~~~~~~~~~~~~ 405 (446)
+++++++.++.|.+||+.+ ++.+..+.. +...+.+++|+|+|++|++++.+ +.|.+||+.+++.+..+....
T Consensus 197 ~~l~~~~~~~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~-- 273 (353)
T 3vgz_A 197 KRLYTTNADGELITIDTAD-NKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE-- 273 (353)
T ss_dssp TEEEEECTTSEEEEEETTT-TEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--
T ss_pred CEEEEEcCCCeEEEEECCC-CeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--
Confidence 9999999999999999965 666666654 45567889999999988777654 899999999998776665433
Q ss_pred eEEEEEcCCCCcEEEEEe
Q 013282 406 ISGISFSPDTESLFIGVW 423 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~~ 423 (446)
..+++|+|+|++|+++..
T Consensus 274 ~~~~~~s~dg~~l~v~~~ 291 (353)
T 3vgz_A 274 SLAVLFNPARNEAYVTHR 291 (353)
T ss_dssp CCCEEEETTTTEEEEEET
T ss_pred CceEEECCCCCEEEEEEC
Confidence 367999999998887764
No 141
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.88 E-value=9.6e-21 Score=197.99 Aligned_cols=262 Identities=10% Similarity=0.058 Sum_probs=183.7
Q ss_pred eEEEEecCCCCceEEEecCCCCCCCC--CCCCCccccCc----cceEEEEEe--CCcEEEEeccCCcEEEEEcCCC---C
Q 013282 152 SVIHWSSLTSSRSQVLNVSGHVAPSE--KHPGSLLEGFT----QTQVSTLAV--KDKLLVAGGFQGELICKHLDRP---G 220 (446)
Q Consensus 152 ~i~~w~~~~~~~~~~~~~~g~~~~~~--~~~g~~~~~~~----~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~---~ 220 (446)
.|.+|+..+++...++...+...... ...+....... ...|.+++| +|++|++++. +.|.+|++.+. .
T Consensus 65 ~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~ 143 (741)
T 2ecf_A 65 DLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAA 143 (741)
T ss_dssp EEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTS
T ss_pred EEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEEEEeC-CcEEEEECCCCCcce
Confidence 78999998887666665433210000 00000000000 012555566 9999999887 99999999876 3
Q ss_pred eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC-CCC----------------eeEEE
Q 013282 221 VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-PWP----------------VNHSS 283 (446)
Q Consensus 221 ~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~----------------v~~~~ 283 (446)
.. .+..+...+..+.| +|+|+. |+.++ ++.|++||+.+++....... ... +..++
T Consensus 144 ~~----~l~~~~~~~~~~~~--SPDG~~-la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~ 215 (741)
T 2ecf_A 144 VR----QLTHGEGFATDAKL--SPKGGF-VSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYW 215 (741)
T ss_dssp CC----BCCCSSSCEEEEEE--CTTSSE-EEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEE
T ss_pred EE----EcccCCcccccccC--CCCCCE-EEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceE
Confidence 22 23345566777766 999984 66554 56999999998887665442 221 47899
Q ss_pred ECCCCCEEEEEecCC---------------------------------cEEEEECCC-CceEEEec--CCCCceeEEEEC
Q 013282 284 QSPDGKLLIIVGDNP---------------------------------DGLLVDSMT-GKTIASLC--GHLDFSFASAWH 327 (446)
Q Consensus 284 ~sp~~~~l~~~~~d~---------------------------------~i~i~d~~~-~~~~~~~~--~~~~~v~~~~~~ 327 (446)
|||||++|++++.++ .|++||+.+ ++...... .|...+..++|
T Consensus 216 ~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~- 294 (741)
T 2ecf_A 216 WAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW- 294 (741)
T ss_dssp ECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-
T ss_pred ECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-
Confidence 999999999987665 789999988 87655443 47788999999
Q ss_pred CCCCEEEEEeC-----CCcEEEEEccCCCcceEEEecCCC----ceEEEEEccCCCEEEEEeCCCeEEEEEcC-CCeeEe
Q 013282 328 PNGVTFATGNQ-----DKTCRIWDLRNLSESVAVLKGNLG----AIRSIRYTSDGRYMATAEPADFVHVYDVK-SGYEKE 397 (446)
Q Consensus 328 p~~~~l~sgs~-----d~~v~iwd~~~~~~~~~~~~~~~~----~v~~l~~s~dg~~l~~~~~dg~i~iwd~~-~~~~~~ 397 (446)
|+|++|++++. +..|++||+.+ ++....+..+.. .+.+++|+|||+++++++.+|.++||.+. ++. ..
T Consensus 295 pDg~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~ 372 (741)
T 2ecf_A 295 RDPQHLSFQRQSRDQKKLDLVEVTLAS-NQQRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AA 372 (741)
T ss_dssp EETTEEEEEEEETTSSEEEEEEEETTT-CCEEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EE
T ss_pred CCCCEEEEEEecccCCeEEEEEEECCC-CceEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-ee
Confidence 99999997764 56799999965 666666655443 45689999999999999999988888765 344 66
Q ss_pred EeeccccCeEEE-EEcCCCCcEEEEEecC
Q 013282 398 QEIDFFGEISGI-SFSPDTESLFIGVWDR 425 (446)
Q Consensus 398 ~~~~~~~~v~~~-~~spdg~~l~~~~~D~ 425 (446)
.+..+...|..+ .|+|+|+.|++.+.+.
T Consensus 373 ~l~~~~~~v~~~~~~s~dg~~l~~~~~~~ 401 (741)
T 2ecf_A 373 ALTHGNWSVDELLAVDEKAGLAYFRAGIE 401 (741)
T ss_dssp ESCCSSSCEEEEEEEETTTTEEEEEECSS
T ss_pred eeeecceEEEeEeEEeCCCCEEEEEEeCC
Confidence 777777888887 5999999887665543
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.88 E-value=1.3e-19 Score=171.79 Aligned_cols=228 Identities=12% Similarity=0.111 Sum_probs=155.3
Q ss_pred EEEeCCcEEEEecc---CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC-c--c
Q 013282 194 TLAVKDKLLVAGGF---QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-K--Y 267 (446)
Q Consensus 194 ~l~~~~~~l~tg~~---dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~-~--~ 267 (446)
+++.+|+ |++++. ++.|.+|++....... ......+...+..+.+ +|+|+.+++++..++.|++|++. . .
T Consensus 46 a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~-~~~~~~~~~~p~~~a~--spdg~~l~~~~~~~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 46 ALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHK-LNTVVAPGTPPAYVAV--DEARQLVYSANYHKGTAEVMKIAADGAL 121 (347)
T ss_dssp EECTTCE-EEEEEEETTEEEEEEEEEETTEEEE-EEEEEEESCCCSEEEE--ETTTTEEEEEETTTTEEEEEEECTTSCE
T ss_pred EEccCCe-EEEEEecCCCceEEEEEecCCcEEE-eeeeecCCCCCEEEEE--CCCCCEEEEEeCCCCEEEEEEeCCCCCe
Confidence 3444788 555544 6899999996554322 2222334455667776 99998644444478999999995 2 3
Q ss_pred eeeEeeeCC----------CCeeEEEECCCCCEEEEEecCCcEEEEECC-CCceEE--EecCC-CCceeEEEECCCCCEE
Q 013282 268 QLSKHFRFP----------WPVNHSSQSPDGKLLIIVGDNPDGLLVDSM-TGKTIA--SLCGH-LDFSFASAWHPNGVTF 333 (446)
Q Consensus 268 ~~~~~~~~~----------~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~-~~~~~~--~~~~~-~~~v~~~~~~p~~~~l 333 (446)
+.+..+... ..+.+++|+|+|+++++...++.|.+|++. +++... .+..+ ...+..++|+|+|+++
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l 201 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA 201 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE
Confidence 333333322 237889999999966666678899999998 554332 22222 2367789999999966
Q ss_pred EE-EeCCCcEEEEEccCC-Cc--ceEEEecCC------CceEEEEEccCCCEEE-EEeCCCeEEEEEcCC---CeeEeEe
Q 013282 334 AT-GNQDKTCRIWDLRNL-SE--SVAVLKGNL------GAIRSIRYTSDGRYMA-TAEPADFVHVYDVKS---GYEKEQE 399 (446)
Q Consensus 334 ~s-gs~d~~v~iwd~~~~-~~--~~~~~~~~~------~~v~~l~~s~dg~~l~-~~~~dg~i~iwd~~~---~~~~~~~ 399 (446)
++ +..++.|++|++... ++ .+..+.... ..+..++|+|+|++|+ ++..++.|.+|++.. ...+..+
T Consensus 202 ~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 202 FLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp EEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred EEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE
Confidence 66 456889999998641 22 122333222 3588899999999875 555689999999973 2444555
Q ss_pred eccccCeEEEEEcCCCCcEEEEEecC
Q 013282 400 IDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 400 ~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
..+...+.+++|+|+|++|+++..+.
T Consensus 282 ~~~~~~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 282 STEGDFPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp ECSSSCCCEEEECTTSSEEEEEETTT
T ss_pred ecCCCCcCeEEECCCCCEEEEEEcCC
Confidence 55566789999999999999987763
No 143
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=1.1e-21 Score=191.66 Aligned_cols=188 Identities=14% Similarity=0.059 Sum_probs=147.0
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc-----------e-----eeEeeeCCCCeeEEEECCCCCEEE----E
Q 013282 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY-----------Q-----LSKHFRFPWPVNHSSQSPDGKLLI----I 293 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~-----------~-----~~~~~~~~~~v~~~~~sp~~~~l~----~ 293 (446)
.++.+++ ++.+. ++++++.++ |++|+.... . ....+.++..|.+++|+|++++|+ +
T Consensus 38 ~~n~lav--s~~~~-~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~s 113 (434)
T 2oit_A 38 RSSLLAV--SNKYG-LVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMS 113 (434)
T ss_dssp CCBCEEE--ETTTT-EEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEE
T ss_pred CccEEEE--ecCCC-EEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEec
Confidence 4677777 78777 577788887 899875321 1 112334567899999999999999 6
Q ss_pred EecCCcEEEEECCCC--------ce---EEEecCCCCceeEEEECCC-CCEEEEEeCCCcEEEEEccCCCcceEEEecCC
Q 013282 294 VGDNPDGLLVDSMTG--------KT---IASLCGHLDFSFASAWHPN-GVTFATGNQDKTCRIWDLRNLSESVAVLKGNL 361 (446)
Q Consensus 294 ~~~d~~i~i~d~~~~--------~~---~~~~~~~~~~v~~~~~~p~-~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~ 361 (446)
++.|+.|+|||+.++ ++ +..+.+|...|.+++|+|+ +.+|++++.||+|++||++. +..+....+|.
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-~~~~~~~~~~~ 192 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-TVKVCATLPST 192 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-SEEEEEEECGG
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-CcceeeccCCC
Confidence 778999999998654 22 4556779999999999997 89999999999999999977 45555666788
Q ss_pred CceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc-------ccCeEEEEEcCCCCcEEEE-EecCCc
Q 013282 362 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-------FGEISGISFSPDTESLFIG-VWDRTY 427 (446)
Q Consensus 362 ~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-------~~~v~~~~~spdg~~l~~~-~~D~~~ 427 (446)
..|++++|+|+|++|++|+.||.|++||++ +.....+..| ...|.+++|++++.++++. ..|+.+
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~ 265 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTL 265 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCS
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCcc
Confidence 899999999999999999999999999998 5444444433 2379999999988777543 444443
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=6.2e-21 Score=198.81 Aligned_cols=267 Identities=10% Similarity=0.034 Sum_probs=180.7
Q ss_pred EecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccC-------
Q 013282 138 WATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQ------- 208 (446)
Q Consensus 138 ~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~d------- 208 (446)
|+.....++...++.|.+|+..+++...++.... .. ...|.++++ +|++|++++.+
T Consensus 24 ~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~--~~-------------~~~v~~~~~SpDg~~l~~~~~~~~~~~~~ 88 (723)
T 1xfd_A 24 WISDTEFIYREQKGTVRLWNVETNTSTVLIEGKK--IE-------------SLRAIRYEISPDREYALFSYNVEPIYQHS 88 (723)
T ss_dssp BSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTT--TT-------------TTTCSEEEECTTSSEEEEEESCCCCSSSC
T ss_pred EcCCCcEEEEeCCCCEEEEECCCCcEEEEecccc--cc-------------ccccceEEECCCCCEEEEEecCccceeec
Confidence 3333333444457789999998887655553221 00 002555555 99999999764
Q ss_pred --CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCe------
Q 013282 209 --GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPV------ 279 (446)
Q Consensus 209 --g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v------ 279 (446)
+.|.+|++.++... .......+...+..+.| ||+|+. |+.++. +.|++|++.+++...... +...+
T Consensus 89 ~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~--SPdG~~-la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~ 163 (723)
T 1xfd_A 89 YTGYYVLSKIPHGDPQ-SLDPPEVSNAKLQYAGW--GPKGQQ-LIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLS 163 (723)
T ss_dssp CCSEEEEEESSSCCCE-ECCCTTCCSCCCSBCCB--CSSTTC-EEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEEC
T ss_pred ceeeEEEEECCCCceE-eccCCccccccccccEE--CCCCCE-EEEEEC-CeEEEEECCCCceEEEecCCCCCceECccc
Confidence 78889999876532 11111223334666666 999985 665554 799999999888766554 23323
Q ss_pred ------------eEEEECCCCCEEEEEecCC----------------------------------cEEEEECCCCceEEE
Q 013282 280 ------------NHSSQSPDGKLLIIVGDNP----------------------------------DGLLVDSMTGKTIAS 313 (446)
Q Consensus 280 ------------~~~~~sp~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~~~~ 313 (446)
.+++|||||+.|++++.++ .|++||+.+++....
T Consensus 164 ~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~ 243 (723)
T 1xfd_A 164 DWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLE 243 (723)
T ss_dssp CHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEE
T ss_pred ceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEE
Confidence 7899999999999887543 799999998886666
Q ss_pred ecCC------CCceeEEEECCCCCEEEEEeC----CCcEEEEEccCCCcceEEEec-CCCce----EEEEEccCCCEEEE
Q 013282 314 LCGH------LDFSFASAWHPNGVTFATGNQ----DKTCRIWDLRNLSESVAVLKG-NLGAI----RSIRYTSDGRYMAT 378 (446)
Q Consensus 314 ~~~~------~~~v~~~~~~p~~~~l~sgs~----d~~v~iwd~~~~~~~~~~~~~-~~~~v----~~l~~s~dg~~l~~ 378 (446)
+..+ ...+.+++|+|+|+++++.+. +..|++||+.. ++....+.. +.+.+ ..++|+|||+.|+.
T Consensus 244 l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 322 (723)
T 1xfd_A 244 MMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATT-GVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFF 322 (723)
T ss_dssp CCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTT-CCEEEEEEEECSSCCCCCCCCCEECTTSCSEEE
T ss_pred eeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCC-CcceEEEEeccCCEEeccCCCceEcCCCCeEEE
Confidence 6654 567899999999999877653 35799999965 555555443 33444 37899999997775
Q ss_pred --EeCCC------eEEEEE-cCCCe--eEeEeeccccCeEE-EEEcCCCCcEEEEEecC
Q 013282 379 --AEPAD------FVHVYD-VKSGY--EKEQEIDFFGEISG-ISFSPDTESLFIGVWDR 425 (446)
Q Consensus 379 --~~~dg------~i~iwd-~~~~~--~~~~~~~~~~~v~~-~~~spdg~~l~~~~~D~ 425 (446)
+..++ .|.+|| ..++. +...+..+...+.. ++|+|+|+.|+..+.+.
T Consensus 323 ~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~ 381 (723)
T 1xfd_A 323 IRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTED 381 (723)
T ss_dssp EEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSS
T ss_pred EEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCC
Confidence 44666 567777 34443 14445444445554 69999999998777663
No 145
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=4.4e-20 Score=191.94 Aligned_cols=274 Identities=15% Similarity=0.153 Sum_probs=184.6
Q ss_pred eEEecccCeEEEecCCeEEEEecCCCCc--eEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcE
Q 013282 136 LVWATSKHDVYLMSHFSVIHWSSLTSSR--SQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGEL 211 (446)
Q Consensus 136 l~~~~~~~~v~~~~~~~i~~w~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i 211 (446)
+.|. +...++...++ | +||..+++. ..++........ .+..... .......|.++++ + +.++.+ .++.|
T Consensus 31 ~~w~-g~~~~~~~~~~-i-~~d~~tg~~~~~~l~~~~~~~~~-l~~~~~~-~~~~~~~v~~~~~spd-~~~~~~-~~~~i 103 (706)
T 2z3z_A 31 LQWM-GDNYVFIEGDD-L-VFNKANGKSAQTTRFSAADLNAL-MPEGCKF-QTTDAFPSFRTLDAGR-GLVVLF-TQGGL 103 (706)
T ss_dssp CEEE-TTEEEEEETTE-E-EEEC-------CEEEEHHHHHTT-C------------CCCEEEEETTT-TEEEEE-ETTEE
T ss_pred CcCc-CCeEEEEeCCc-E-EEECCCCcEeeEEeechhHhhhh-ccchhcc-ccccccCceeEEECCC-CeEEEE-ECCEE
Confidence 3455 44455555555 8 999998877 555543211000 0000000 0011125888888 6 565555 45999
Q ss_pred EEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-----ceeeEeeeCCCC--------
Q 013282 212 ICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-----YQLSKHFRFPWP-------- 278 (446)
Q Consensus 212 ~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-----~~~~~~~~~~~~-------- 278 (446)
++|++.+.... . ...+...+..+.| +|+|+. |+++ .++.|++|++.+ ++..........
T Consensus 104 ~~~d~~~~~~~---~-l~~~~~~~~~~~~--SpdG~~-la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~ 175 (706)
T 2z3z_A 104 VGFDMLARKVT---Y-LFDTNEETASLDF--SPVGDR-VAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAV 175 (706)
T ss_dssp EEEETTTTEEE---E-EECCTTCCTTCEE--CTTSSE-EEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCC
T ss_pred EEEECCCCceE---E-ccCCcccccCCcC--CCCCCE-EEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccch
Confidence 99999775322 2 2334556777777 999985 5554 679999999998 776654442222
Q ss_pred -------eeEEEECCCCCEEEEEe---------------------------------cCCcEEEEECCCCceEEEec--C
Q 013282 279 -------VNHSSQSPDGKLLIIVG---------------------------------DNPDGLLVDSMTGKTIASLC--G 316 (446)
Q Consensus 279 -------v~~~~~sp~~~~l~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~--~ 316 (446)
+.++.|+|||++|++++ .+..|++||+.+++...... .
T Consensus 176 ~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~ 255 (706)
T 2z3z_A 176 HQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEP 255 (706)
T ss_dssp GGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSC
T ss_pred hhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCC
Confidence 48899999999999987 44679999999887655442 4
Q ss_pred CCCceeEEEECCCCCEEEEEeCCC-----cEEEEEccCCCcceEEEe--cCCC---ceEEEEEcc--CCCEEEEEeCCCe
Q 013282 317 HLDFSFASAWHPNGVTFATGNQDK-----TCRIWDLRNLSESVAVLK--GNLG---AIRSIRYTS--DGRYMATAEPADF 384 (446)
Q Consensus 317 ~~~~v~~~~~~p~~~~l~sgs~d~-----~v~iwd~~~~~~~~~~~~--~~~~---~v~~l~~s~--dg~~l~~~~~dg~ 384 (446)
|...+.+++|+|+|++|++++.++ .|++||+.+ ++....+. .+.. .+.+++|+| +|++|++++.++.
T Consensus 256 ~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~-g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~ 334 (706)
T 2z3z_A 256 KEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET-GRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGW 334 (706)
T ss_dssp TTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT-CCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSS
T ss_pred CceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC-CceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCc
Confidence 667899999999999999988775 899999965 42333332 2222 246789999 9999999999999
Q ss_pred EEEEEcC-CCeeEeEeeccccCeEE-EEEcCCCCcEEEEEecC
Q 013282 385 VHVYDVK-SGYEKEQEIDFFGEISG-ISFSPDTESLFIGVWDR 425 (446)
Q Consensus 385 i~iwd~~-~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~D~ 425 (446)
++||.+. ++..+..+..+...+.. ++|+|+|+.|++++.+.
T Consensus 335 ~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~ 377 (706)
T 2z3z_A 335 NHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEA 377 (706)
T ss_dssp CEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSS
T ss_pred cEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCC
Confidence 9999876 56667777777777877 79999999988777654
No 146
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.87 E-value=6.5e-20 Score=173.32 Aligned_cols=217 Identities=11% Similarity=0.101 Sum_probs=162.0
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCC-CceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN-AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP 276 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~-~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 276 (446)
++.++++++.+++|.+||+.+.... ..+..+. ..+..+.+ +|+|+.+++++..++.|.+||+.+++.+..+...
T Consensus 10 ~~~~~v~~~~~~~v~~~d~~~~~~~---~~~~~~~~~~~~~~~~--s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~ 84 (349)
T 1jmx_B 10 GHEYMIVTNYPNNLHVVDVASDTVY---KSCVMPDKFGPGTAMM--APDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLS 84 (349)
T ss_dssp TCEEEEEEETTTEEEEEETTTTEEE---EEEECSSCCSSCEEEE--CTTSSEEEEEETTTTEEEEEETTTTEEEEEEESC
T ss_pred CCEEEEEeCCCCeEEEEECCCCcEE---EEEecCCCCCCceeEE--CCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcc
Confidence 6788999999999999999876433 2222222 13455665 9999866677778899999999999988777632
Q ss_pred C-------CeeEEEECCCCCEEEEEecC------------CcEEEEECCCCce---EEEecCCCCceeEEEECCCCCEEE
Q 013282 277 W-------PVNHSSQSPDGKLLIIVGDN------------PDGLLVDSMTGKT---IASLCGHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 277 ~-------~v~~~~~sp~~~~l~~~~~d------------~~i~i~d~~~~~~---~~~~~~~~~~v~~~~~~p~~~~l~ 334 (446)
. .+..++|+|+|++|++++.+ +.|.+||+.+++. +..+. +...+.+++|+|+|+ ++
T Consensus 85 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~ 162 (349)
T 1jmx_B 85 SVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LY 162 (349)
T ss_dssp CSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EE
T ss_pred cccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EE
Confidence 2 37899999999999988865 8999999988543 33343 344688999999999 55
Q ss_pred EEeCCCcEEEEEccCCCcceEEEecCC-----------------------------------------------------
Q 013282 335 TGNQDKTCRIWDLRNLSESVAVLKGNL----------------------------------------------------- 361 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~~~~~~----------------------------------------------------- 361 (446)
+++. .|.+||+.+ ++.+..+..+.
T Consensus 163 ~~~~--~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 239 (349)
T 1jmx_B 163 VAGP--DIYKMDVKT-GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVD 239 (349)
T ss_dssp EESS--SEEEECTTT-CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEE
T ss_pred EccC--cEEEEeCCC-CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEe
Confidence 5543 499999965 55554443221
Q ss_pred ---------------CceEEEEEcc-CCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 362 ---------------GAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 362 ---------------~~v~~l~~s~-dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
..+.+++|+| +|++|+++ ++.|.+||+.+++.+..+. ....+.+++|+|+|++|++++.++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~ 316 (349)
T 1jmx_B 240 LKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAAN-LDHTYYCVAFDKKGDKLYLGGTFN 316 (349)
T ss_dssp TTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEE-CSSCCCEEEECSSSSCEEEESBSS
T ss_pred ccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEc-CCCCccceEECCCCCEEEEecCCC
Confidence 1345678889 99999988 8899999999998766655 344578999999999999876554
Q ss_pred Cc
Q 013282 426 TY 427 (446)
Q Consensus 426 ~~ 427 (446)
.+
T Consensus 317 ~v 318 (349)
T 1jmx_B 317 DL 318 (349)
T ss_dssp EE
T ss_pred eE
Confidence 44
No 147
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=2.4e-19 Score=168.46 Aligned_cols=217 Identities=10% Similarity=0.006 Sum_probs=161.2
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee-eEeee-C
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL-SKHFR-F 275 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~-~~~~~-~ 275 (446)
.+..+++++.++.|.+|++.+..... ....+...+ .+.+ +|+|+.+++++..++.|++||+.+++. ...+. +
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~---~~~~~~~~~-~~~~--s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 82 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILN---QITLGYDFV-DTAI--TSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEG 82 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEE---EEECCCCEE-EEEE--CSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEEC
T ss_pred CCEEEEEecCCCeEEEEeCcccceee---eEEccCCcc-eEEE--cCCCCEEEEEeCCCCeEEEEECCCCceeEEecccC
Confidence 34568888999999999998776542 222334444 5555 999986666666689999999999887 66666 4
Q ss_pred CCCeeEEEECCCCCEEEEEecCC---cEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCc-EEEEEccCC
Q 013282 276 PWPVNHSSQSPDGKLLIIVGDNP---DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKT-CRIWDLRNL 350 (446)
Q Consensus 276 ~~~v~~~~~sp~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~-v~iwd~~~~ 350 (446)
..+..+++|+|+|++++++..++ .|.+||+.+++.+..+..+ ....+++|+|+|++++++ ..++. |.+|++...
T Consensus 83 ~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~ 161 (331)
T 3u4y_A 83 QSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDAD 161 (331)
T ss_dssp SSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTT
T ss_pred CCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCC
Confidence 44444499999999999555553 8999999999988887754 446899999999855554 55688 999999653
Q ss_pred Ccce---EEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCee---EeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 351 SESV---AVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYE---KEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 351 ~~~~---~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~---~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
+... .........+..++|+|+|++|++++ .++.|++||+.+++. +..+. ....+.+++|+|+|++|+++.
T Consensus 162 g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~ 239 (331)
T 3u4y_A 162 GVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-TNNLPGTIVVSRDGSTVYVLT 239 (331)
T ss_dssp CCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-CSSCCCCEEECTTSSEEEEEC
T ss_pred CcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-CCCCCceEEECCCCCEEEEEE
Confidence 3321 11223345688999999999766555 688999999998876 55555 446788999999999887664
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=1.2e-19 Score=196.62 Aligned_cols=223 Identities=15% Similarity=0.083 Sum_probs=179.6
Q ss_pred EEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-----------CCCceeeEEEEeC-CCCCeEEEEEeCCCcE
Q 013282 192 VSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-----------DNAITNAVEIYGS-PSGAVHFTASNNDCGV 259 (446)
Q Consensus 192 v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-----------~~~~v~~i~~~~s-~~~~~~l~s~s~dg~v 259 (446)
..+++++|++|+++ .++.|.+|++.... . . .... +...+..+.| + |+|+. |++++ ++.|
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~~~-l--~-~l~~~~~~~~~~~~~~~~~v~~~~~--S~pdG~~-la~~~-~~~i 319 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDTEK-I--E-KIEIGDLESPEDRIISIPSKFAEDF--SPLDGDL-IAFVS-RGQA 319 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTTCC-E--E-ECCCCCCCBCCSEEEECGGGGEEEE--EECGGGC-EEEEE-TTEE
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCceE-e--e-eeccCcccccccccccccccceeee--cCCCCCE-EEEEE-cCEE
Confidence 44667799999888 58999999984322 2 1 2222 2234666666 9 99985 55554 7899
Q ss_pred EEEecCcceeeEeeeCCC-CeeEEEECCCCCEEEEEecCCcEE-EEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe
Q 013282 260 RDFDMGKYQLSKHFRFPW-PVNHSSQSPDGKLLIIVGDNPDGL-LVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 260 ~iwd~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~d~~i~-i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs 337 (446)
++|++.+++......+.. .+..++|+ +|+.|++++.+..+. +|++.+++.. .+.+|...+..++|+|+|++|++++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~ 397 (1045)
T 1k32_A 320 FIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVAN 397 (1045)
T ss_dssp EEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEE
T ss_pred EEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEEC
Confidence 999998887665444666 79999999 999999999888888 9999877654 4447888999999999999999999
Q ss_pred CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCC----------eEEEEEcCCCeeEeEeeccccCeE
Q 013282 338 QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD----------FVHVYDVKSGYEKEQEIDFFGEIS 407 (446)
Q Consensus 338 ~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg----------~i~iwd~~~~~~~~~~~~~~~~v~ 407 (446)
.++.|++||+.. ++....+.+|.+.+.+++|+|||++|++++.++ .|++||+.+++ ...+..|...+.
T Consensus 398 ~~~~v~~~d~~t-g~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~ 475 (1045)
T 1k32_A 398 DRFEIMTVDLET-GKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDY 475 (1045)
T ss_dssp TTSEEEEEETTT-CCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEE
T ss_pred CCCeEEEEECCC-CceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccC
Confidence 999999999965 666667768889999999999999999887654 89999999886 667777888899
Q ss_pred EEEEcCCCCcEEEEEecCCc
Q 013282 408 GISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 408 ~~~~spdg~~l~~~~~D~~~ 427 (446)
.++|+|+|++|++++.++..
T Consensus 476 ~~~~spdG~~l~~~s~~~~~ 495 (1045)
T 1k32_A 476 APAFDADSKNLYYLSYRSLD 495 (1045)
T ss_dssp EEEECTTSCEEEEEESCCCC
T ss_pred CceEcCCCCEEEEEecccCC
Confidence 99999999999998876554
No 149
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=1.1e-18 Score=164.40 Aligned_cols=260 Identities=11% Similarity=0.101 Sum_probs=167.7
Q ss_pred eeEEecccCeEEEecC--CeEEEEecC--CCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEec-c
Q 013282 135 NLVWATSKHDVYLMSH--FSVIHWSSL--TSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG-F 207 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~~--~~i~~w~~~--~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~-~ 207 (446)
.+.++.....++.... +.|.+|+.. ++....+..+..+. .+..+++ ++++|++++ .
T Consensus 42 ~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~s~dg~~l~~~~~~ 104 (343)
T 1ri6_A 42 PMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-----------------SLTHISTDHQGQFVFVGSYN 104 (343)
T ss_dssp CEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-----------------CCSEEEECTTSSEEEEEETT
T ss_pred eEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-----------------CCcEEEEcCCCCEEEEEecC
Confidence 3445554444555443 789999986 44443333332111 2445555 888776665 4
Q ss_pred CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ceeeE----eee--CCCCee
Q 013282 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSK----HFR--FPWPVN 280 (446)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~~~~----~~~--~~~~v~ 280 (446)
++.|.+|++..+........... ...+..+.+ +|+++.+++++..++.|++||+.+ ++... .+. ....+.
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~--s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVEG-LDGCHSANI--SPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEECC-CTTBCCCEE--CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred CCeEEEEECCCCccccccccccC-CCCceEEEE--CCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 88999999962222222233333 334667766 999986555554899999999987 65432 222 345788
Q ss_pred EEEECCCCCEEEEEe-cCCcEEEEECC--CCce--EEEec----CC--CCceeEEEECCCCCEEEEE-eCCCcEEEEEcc
Q 013282 281 HSSQSPDGKLLIIVG-DNPDGLLVDSM--TGKT--IASLC----GH--LDFSFASAWHPNGVTFATG-NQDKTCRIWDLR 348 (446)
Q Consensus 281 ~~~~sp~~~~l~~~~-~d~~i~i~d~~--~~~~--~~~~~----~~--~~~v~~~~~~p~~~~l~sg-s~d~~v~iwd~~ 348 (446)
+++|+|+++++++++ .++.|.+|++. +++. ...+. ++ ...+..++|+|+|++|+++ ..++.|++||+.
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 999999999776555 78999999995 3433 22222 11 2356689999999888754 478999999996
Q ss_pred CC---CcceEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEE--EcCCCee--EeEeeccccCeEEEEEcCCCC
Q 013282 349 NL---SESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVY--DVKSGYE--KEQEIDFFGEISGISFSPDTE 416 (446)
Q Consensus 349 ~~---~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iw--d~~~~~~--~~~~~~~~~~v~~~~~spdg~ 416 (446)
.. .+.+..+..+.. +.+++|+|+|++|++++ .++.|.+| |..++.. +..+. ......+++|.|+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~-~g~~p~~i~~~~~~~ 335 (343)
T 1ri6_A 262 EDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLLHEKGRYA-VGQGPMWVVVNAHEG 335 (343)
T ss_dssp TTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEEEEEEEEE-CSSSCCEEEEEEEC-
T ss_pred CCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEcCCCceeeEccccc-cCCCCeeEEEEcccC
Confidence 31 234445554444 88999999999988888 57999999 5556643 22222 234577888877543
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=1.1e-19 Score=184.83 Aligned_cols=227 Identities=13% Similarity=0.028 Sum_probs=169.3
Q ss_pred eEEEEEe-CCcEEEEecc---CCcEEEEEcCC--CCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec
Q 013282 191 QVSTLAV-KDKLLVAGGF---QGELICKHLDR--PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~---dg~i~vw~~~~--~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~ 264 (446)
.+.+++| .++++++++. +....+|.++. .+... ..... .+ +....+ +|+|+.++++++.++.+.+||+
T Consensus 66 ~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~~g~~~--~l~~~-~~-~~~~~~--s~dg~~~~~~s~~~~~~~l~d~ 139 (582)
T 3o4h_A 66 SVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSRPGEEQ--RLEAV-KP-MRILSG--VDTGEAVVFTGATEDRVALYAL 139 (582)
T ss_dssp EECEECTTCSEEEEEEECSTTSCCEEEEEEETTSTTCCE--ECTTS-CS-BEEEEE--EECSSCEEEEEECSSCEEEEEE
T ss_pred ccccccCCCCeEEEEeccCCCCcceEEEEEeccCCCccc--cccCC-CC-ceeeee--CCCCCeEEEEecCCCCceEEEc
Confidence 4677777 2266666654 45566766544 33322 22222 22 334444 7787655666656666679999
Q ss_pred CcceeeEeeeCCCCeeEEEECCCCCEEEEEecC----CcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCC
Q 013282 265 GKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN----PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 265 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
.++++.....++. .+++|+|||++|++++.+ +.|++||+.+++.. .+..|.+.+..++|+|||++|+++..++
T Consensus 140 ~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~ 216 (582)
T 3o4h_A 140 DGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAR 216 (582)
T ss_dssp ETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSS
T ss_pred cCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCC
Confidence 9988777666544 889999999999988766 78999999988754 6778889999999999999999888888
Q ss_pred --cEEEEEccCCCcceEEEecCCCceEEEE--------EccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEE
Q 013282 341 --TCRIWDLRNLSESVAVLKGNLGAIRSIR--------YTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 410 (446)
Q Consensus 341 --~v~iwd~~~~~~~~~~~~~~~~~v~~l~--------~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 410 (446)
+|++||+.. ++.. .+.+|...+..++ |+|||+++++++.++.+++|++ ++... .+.+.+.+++
T Consensus 217 ~~~i~~~d~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~ 289 (582)
T 3o4h_A 217 EARLVTVDPRD-GSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVE---APQGNHGRVV 289 (582)
T ss_dssp CEEEEEECTTT-CCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEEC---CCSSEEEEEE
T ss_pred eeEEEEEcCCC-CcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeec---cCCCceEEEE
Confidence 899999965 5555 7777777777777 9999999999999999999999 65543 3446789999
Q ss_pred EcCCCCcEEEEEecCCcceEEEEe
Q 013282 411 FSPDTESLFIGVWDRTYGSLLEYG 434 (446)
Q Consensus 411 ~spdg~~l~~~~~D~~~~~~l~~~ 434 (446)
|+ +|+++++++.+.+-..+..+.
T Consensus 290 ~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 290 LW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp EE-TTEEEEEEEETTEEEEEEEET
T ss_pred ec-CCEEEEEEcCCCCCCeEEEEc
Confidence 99 999999888887766555443
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2.5e-20 Score=194.25 Aligned_cols=221 Identities=12% Similarity=0.066 Sum_probs=164.1
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCC---ceeeEEEEeCCCCCeEEEEEeCC---------C
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA---ITNAVEIYGSPSGAVHFTASNND---------C 257 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~---~v~~i~~~~s~~~~~~l~s~s~d---------g 257 (446)
+.+++| +|+++++ +.+|+|++|++.++... .++..+.. .+..+.| ||+|+. |++++.+ +
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~---~~~~~~~~~~~~v~~~~~--SpDg~~-l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTST---VLIEGKKIESLRAIRYEI--SPDREY-ALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE---EEECTTTTTTTTCSEEEE--CTTSSE-EEEEESCCCCSSSCCCS
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE---EEeccccccccccceEEE--CCCCCE-EEEEecCccceeeccee
Confidence 445566 7886665 78999999999887543 34444443 3677766 999984 6666553 7
Q ss_pred cEEEEecCcceeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCce-------------
Q 013282 258 GVRDFDMGKYQLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFS------------- 321 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v------------- 321 (446)
.|++||+.+++...... +...+..++|||||+.|++++. +.|++||+.+++.......+...+
T Consensus 92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee 170 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEE 170 (723)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHT
T ss_pred eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEE
Confidence 88999999887632222 3334889999999999999886 799999999988776665544333
Q ss_pred -----eEEEECCCCCEEEEEeCCC----------------------------------cEEEEEccCCCcceEEEecC--
Q 013282 322 -----FASAWHPNGVTFATGNQDK----------------------------------TCRIWDLRNLSESVAVLKGN-- 360 (446)
Q Consensus 322 -----~~~~~~p~~~~l~sgs~d~----------------------------------~v~iwd~~~~~~~~~~~~~~-- 360 (446)
.+++|+|+|++|++++.++ +|++||+.. ++....+..+
T Consensus 171 ~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-~~~~~~l~~~~~ 249 (723)
T 1xfd_A 171 ILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-PTHDLEMMPPDD 249 (723)
T ss_dssp TSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-SCCCEECCCCCC
T ss_pred eccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-CceeEEeeCCcc
Confidence 7899999999999988653 799999965 5544555543
Q ss_pred ----CCceEEEEEccCCCEEEEEeCC----CeEEEEEcCCCeeEeEeec-cccCe----EEEEEcCCCCcEEEE
Q 013282 361 ----LGAIRSIRYTSDGRYMATAEPA----DFVHVYDVKSGYEKEQEID-FFGEI----SGISFSPDTESLFIG 421 (446)
Q Consensus 361 ----~~~v~~l~~s~dg~~l~~~~~d----g~i~iwd~~~~~~~~~~~~-~~~~v----~~~~~spdg~~l~~~ 421 (446)
...+.+++|+|||++|++.+.. ..|++||+.+++....+.. +.+.+ ..++|+|||+.|+..
T Consensus 250 ~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 323 (723)
T 1xfd_A 250 PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFI 323 (723)
T ss_dssp GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEE
T ss_pred CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEE
Confidence 5678999999999988776533 5799999999876655443 33433 378999999998865
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=2.9e-18 Score=163.38 Aligned_cols=259 Identities=13% Similarity=0.122 Sum_probs=168.7
Q ss_pred eeEEecccCeEEEecC-----CeEEEEecCC--CCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec-
Q 013282 135 NLVWATSKHDVYLMSH-----FSVIHWSSLT--SSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG- 206 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~~-----~~i~~w~~~~--~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~- 206 (446)
.+.++.....+|.... +.+.+|+... +....+.....+ ......+++++++|++++
T Consensus 54 ~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~----------------~~~p~~~~~dg~~l~~~~~ 117 (361)
T 3scy_A 54 YLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTM----------------GADPCYLTTNGKNIVTANY 117 (361)
T ss_dssp SEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECS----------------SSCEEEEEECSSEEEEEET
T ss_pred eEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccC----------------CCCcEEEEECCCEEEEEEC
Confidence 3456655566666554 5888887644 333333222211 013556666888777766
Q ss_pred cCCcEEEEEcCCCCeeeEE-EE--eec--------CCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce-------
Q 013282 207 FQGELICKHLDRPGVSFCS-RT--TYD--------DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ------- 268 (446)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~-~~--~~~--------~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~------- 268 (446)
.++.|.+|++...+..... .. ..+ +...+..+.+ +|+|+.+++++..++.|++|++....
T Consensus 118 ~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~ 195 (361)
T 3scy_A 118 SGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRI--TPDGKYLLADDLGTDQIHKFNINPNANADNKEK 195 (361)
T ss_dssp TTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEE--CTTSSEEEEEETTTTEEEEEEECTTCCTTTCCC
T ss_pred CCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEE--CCCCCEEEEEeCCCCEEEEEEEcCCCCcccccc
Confidence 5789999999765422111 11 111 0112344555 99998766766678999999886433
Q ss_pred e-------eEeeeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCCce--EEEec---CCCCceeEEEECCCCCEEEE
Q 013282 269 L-------SKHFRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKT--IASLC---GHLDFSFASAWHPNGVTFAT 335 (446)
Q Consensus 269 ~-------~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~--~~~~~---~~~~~v~~~~~~p~~~~l~s 335 (446)
+ .........+..++|+|+|+++++++ .++.|.+|++.+++. +..+. .+......++|+|+|++|++
T Consensus 196 l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v 275 (361)
T 3scy_A 196 FLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYA 275 (361)
T ss_dssp CEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEE
T ss_pred eeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEE
Confidence 1 11223456688999999999887777 689999999987754 23332 23345689999999999877
Q ss_pred EeCC--CcEEEEEccC-CCc--ceEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEE--EcCCCeeEeEe-eccccCe
Q 013282 336 GNQD--KTCRIWDLRN-LSE--SVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVY--DVKSGYEKEQE-IDFFGEI 406 (446)
Q Consensus 336 gs~d--~~v~iwd~~~-~~~--~~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iw--d~~~~~~~~~~-~~~~~~v 406 (446)
++.+ ++|.+|++.. .+. .+..+.. ...+.+++|+|+|++|++++ .++.|.+| |..+++..... ..+...+
T Consensus 276 ~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p 354 (361)
T 3scy_A 276 SNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKP 354 (361)
T ss_dssp EECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSE
T ss_pred ECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCC
Confidence 7665 8999999952 223 3444444 45688999999999998888 57889996 44566544332 1244578
Q ss_pred EEEEEc
Q 013282 407 SGISFS 412 (446)
Q Consensus 407 ~~~~~s 412 (446)
.|+.|.
T Consensus 355 ~~v~~~ 360 (361)
T 3scy_A 355 VCLKFV 360 (361)
T ss_dssp EEEEEE
T ss_pred eEEEEc
Confidence 888886
No 153
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=2.1e-18 Score=161.94 Aligned_cols=231 Identities=15% Similarity=0.091 Sum_probs=167.8
Q ss_pred ecCCeEEEEecCCCCceEEEecCCCC-CCCCCCCCCccccCccceEEEEEeCCcEE-EEeccCCcEEEEEcCCCCeeeEE
Q 013282 148 MSHFSVIHWSSLTSSRSQVLNVSGHV-APSEKHPGSLLEGFTQTQVSTLAVKDKLL-VAGGFQGELICKHLDRPGVSFCS 225 (446)
Q Consensus 148 ~~~~~i~~w~~~~~~~~~~~~~~g~~-~~~~~~~g~~~~~~~~~~v~~l~~~~~~l-~tg~~dg~i~vw~~~~~~~~~~~ 225 (446)
..++.|.+||..+++....+...+.. .+ .-.+++.+++++ +++..++.|.+|++.+.......
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~---------------~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 72 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAGPTP---------------MVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRI 72 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCTTCC---------------CCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCCCCc---------------cceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeE
Confidence 44678899999887655444433210 00 122344477654 66677899999999877644222
Q ss_pred EEeec---CCCceeeEEEEeCCCCCeEEEEEe------------CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCE
Q 013282 226 RTTYD---DNAITNAVEIYGSPSGAVHFTASN------------NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKL 290 (446)
Q Consensus 226 ~~~~~---~~~~v~~i~~~~s~~~~~~l~s~s------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~ 290 (446)
.. .. +...+..+.+ +|+|+. +++++ .++.|.+||+.+++.+..+.....+.+++|+|++++
T Consensus 73 ~~-~~~~~~~~~~~~~~~--s~dg~~-l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~ 148 (337)
T 1pby_B 73 DL-STPEERVKSLFGAAL--SPDGKT-LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSK 148 (337)
T ss_dssp EC-CBTTEEEECTTCEEE--CTTSSE-EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSC
T ss_pred Ec-CCcccccccccceEE--CCCCCE-EEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCE
Confidence 11 11 0113455666 999985 55554 579999999999998888887677889999999998
Q ss_pred EEEEecCCcEEEEECCCCceEEEecCCC----------------------------------------------------
Q 013282 291 LIIVGDNPDGLLVDSMTGKTIASLCGHL---------------------------------------------------- 318 (446)
Q Consensus 291 l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------------------------------------------- 318 (446)
|+++ ++.|++||+.+++.+..+..+.
T Consensus 149 l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~ 226 (337)
T 1pby_B 149 LYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDL 226 (337)
T ss_dssp EEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEET
T ss_pred EEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeC
Confidence 8887 6789999999887765554221
Q ss_pred --------------CceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCe
Q 013282 319 --------------DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 384 (446)
Q Consensus 319 --------------~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~ 384 (446)
..+.+++|+|+|++++++ ++.|.+||+.. ++.+..+..+ ..+.+++|+|+|++|++++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~ 302 (337)
T 1pby_B 227 ETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-NASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGD 302 (337)
T ss_dssp TTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-TEEEEEEECS-SCCCEEEECTTSCEEEEESBSSE
T ss_pred CCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-CcCcceecCC-CceeeEEECCCCCEEEEEcCCCc
Confidence 123468999999999988 78999999965 6666666643 46789999999999999999999
Q ss_pred EEEEEcCCCeeEeEeeccc
Q 013282 385 VHVYDVKSGYEKEQEIDFF 403 (446)
Q Consensus 385 i~iwd~~~~~~~~~~~~~~ 403 (446)
|++||+.+++.+..+..+.
T Consensus 303 i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 303 LAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp EEEEETTTCCEEEEEECGG
T ss_pred EEEEECcCCcEEEEEEcCC
Confidence 9999999998877766443
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.85 E-value=4e-18 Score=162.38 Aligned_cols=225 Identities=14% Similarity=0.113 Sum_probs=151.5
Q ss_pred EEEeCCcEEEEeccC----CcEEEEEcCCC-CeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 194 TLAVKDKLLVAGGFQ----GELICKHLDRP-GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 194 ~l~~~~~~l~tg~~d----g~i~vw~~~~~-~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
+++.++++|++++.+ |.|.+|++... +..........+......+.+ +++.++++...++.|.+|++....
T Consensus 56 ~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 56 IPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT----NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp EECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE----CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred EECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE----CCCEEEEEECCCCEEEEEEeCCCC
Confidence 444489999998875 79999998765 332222222223333344433 677555555578999999997533
Q ss_pred eeE----eeeC-----------CCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCCc-------eE------EEecCCCC
Q 013282 269 LSK----HFRF-----------PWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGK-------TI------ASLCGHLD 319 (446)
Q Consensus 269 ~~~----~~~~-----------~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~-------~~------~~~~~~~~ 319 (446)
.+. .+.+ ...+.+++|+|+|+++++++ .++.|.+|++.... .. .....+..
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 221 1111 12357899999999776655 47899999887433 11 11223445
Q ss_pred ceeEEEECCCCCEEEEEe-CCCcEEEEEccCCCcc--eEEEec---CCCceEEEEEccCCCEEEEEeCC--CeEEEEEcC
Q 013282 320 FSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSES--VAVLKG---NLGAIRSIRYTSDGRYMATAEPA--DFVHVYDVK 391 (446)
Q Consensus 320 ~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~~~--~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d--g~i~iwd~~ 391 (446)
.+..++|+|+|+++++++ .++.|.+|++.. +.. +..+.. +...+..++|+|||++|+++..+ +.|.+|++.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~-g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYAD-GMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEET-TEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecC-CceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 678999999999888777 589999999964 432 233322 23456799999999999777654 899999996
Q ss_pred --CCe--eEeEeeccccCeEEEEEcCCCCcEEEEEec
Q 013282 392 --SGY--EKEQEIDFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 392 --~~~--~~~~~~~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
++. .+..+.. ...+.+++|+|+|++|++++.+
T Consensus 291 ~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~ 326 (361)
T 3scy_A 291 ETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRD 326 (361)
T ss_dssp TTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETT
T ss_pred CCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECC
Confidence 444 3333333 4568899999999999998754
No 155
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.85 E-value=5.4e-20 Score=186.94 Aligned_cols=228 Identities=12% Similarity=0.017 Sum_probs=166.6
Q ss_pred ceEEEEEe--CCcEEEEecc-CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC---CCcEEEEe
Q 013282 190 TQVSTLAV--KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFD 263 (446)
Q Consensus 190 ~~v~~l~~--~~~~l~tg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~---dg~v~iwd 263 (446)
.+|.++++ ||++||+++. +|++.||++..+. ..+++.++...+..+.| +|+ + ++++++. +...++|.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~---~~~lt~~~~~~~~~~~~--spd-~-~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGE---TVKLNREPINSVLDPHY--GVG-R-VILVRDVSKGAEQHALFK 94 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTE---EEECCSSCCSEECEECT--TCS-E-EEEEEECSTTSCCEEEEE
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCC---cEeeecccccccccccC--CCC-e-EEEEeccCCCCcceEEEE
Confidence 36777776 9999999887 9999999985442 23444444356666655 888 4 6777664 45556655
Q ss_pred cCc---ceeeEeeeCCCCeeEEEECCCCCE-EEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCC
Q 013282 264 MGK---YQLSKHFRFPWPVNHSSQSPDGKL-LIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD 339 (446)
Q Consensus 264 ~~~---~~~~~~~~~~~~v~~~~~sp~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d 339 (446)
+.. +... .+.....+...+|+|+|+. +++.+..+.+.+||+.+++.......+ . .+++|+|+|++|++++.+
T Consensus 95 ~~~~~~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~-~--~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP-G--FGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp EETTSTTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES-S--CEEEEEEETTEEEEEEEE
T ss_pred EeccCCCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC-C--ceEEECCCCCEEEEEEEc
Confidence 432 2222 3333334667789998864 344445556669999988765554433 3 789999999999988877
Q ss_pred ----CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCC--eEEEEEcCCCeeEeEeeccccCeEEEE---
Q 013282 340 ----KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPAD--FVHVYDVKSGYEKEQEIDFFGEISGIS--- 410 (446)
Q Consensus 340 ----~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~--- 410 (446)
+.|++||+.. ++ ...+..|.+.+..++|||||++|+++..++ .|++||+.++... .+..|...+..++
T Consensus 171 ~~~~~~i~~~d~~~-g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~ 247 (582)
T 3o4h_A 171 GGGRVSLFTSNLSS-GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTA 247 (582)
T ss_dssp ETTEEEEEEEETTT-CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSE
T ss_pred CCCCeEEEEEcCCC-CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhcc
Confidence 7899999864 44 457788888999999999999999888888 8999999998776 6666776676677
Q ss_pred -----EcCCCCcEEEEEecCCcceEE
Q 013282 411 -----FSPDTESLFIGVWDRTYGSLL 431 (446)
Q Consensus 411 -----~spdg~~l~~~~~D~~~~~~l 431 (446)
|+|||..+++++.|+++..+.
T Consensus 248 ~~~~~~spdg~~~~~~~~~g~~~l~~ 273 (582)
T 3o4h_A 248 ITWLGYLPDGRLAVVARREGRSAVFI 273 (582)
T ss_dssp EEEEEECTTSCEEEEEEETTEEEEEE
T ss_pred ccceeEcCCCcEEEEEEcCCcEEEEE
Confidence 999998888888888765443
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=8.9e-19 Score=189.84 Aligned_cols=265 Identities=11% Similarity=0.033 Sum_probs=195.3
Q ss_pred eeeeEEe-cccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe-CCcEEEEeccCCc
Q 013282 133 LRNLVWA-TSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV-KDKLLVAGGFQGE 210 (446)
Q Consensus 133 ~~~l~~~-~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~-~~~~l~tg~~dg~ 210 (446)
...+.|+ .....+.+..++.+.+|+..++... .+.++. ...+..++| +++.|++++.++.
T Consensus 298 v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~---~~~~~~---------------~~~~~~~~~sdg~~l~~~s~~~~ 359 (1045)
T 1k32_A 298 KFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVL---KVPEPL---------------RIRYVRRGGDTKVAFIHGTREGD 359 (1045)
T ss_dssp GGEEEEEECGGGCEEEEETTEEEEECTTSSBEE---ECSCCS---------------CEEEEEECSSSEEEEEEEETTEE
T ss_pred cceeeecCCCCCEEEEEEcCEEEEEcCCCCceE---EccCCC---------------cceEEeeeEcCCCeEEEEECCCc
Confidence 3445566 5444455555788899987665322 122211 114666666 7888999888888
Q ss_pred EE-EEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCC
Q 013282 211 LI-CKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDG 288 (446)
Q Consensus 211 i~-vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~ 288 (446)
+. +|++...... .+. .+...+..+.+ +|+|+ .|++++.++.|++||+.+++....+. +...+.+++|+|||
T Consensus 360 l~~~~d~~~~~~~---~l~-~~~~~~~~~~~--SpDG~-~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG 432 (1045)
T 1k32_A 360 FLGIYDYRTGKAE---KFE-ENLGNVFAMGV--DRNGK-FAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNS 432 (1045)
T ss_dssp EEEEEETTTCCEE---ECC-CCCCSEEEEEE--CTTSS-EEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTS
T ss_pred eEEEEECCCCCce---Eec-CCccceeeeEE--CCCCC-EEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCC
Confidence 88 8898765422 233 56666777766 99998 58888899999999999999887774 78889999999999
Q ss_pred CEEEEEecCC----------cEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCC-------
Q 013282 289 KLLIIVGDNP----------DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS------- 351 (446)
Q Consensus 289 ~~l~~~~~d~----------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~------- 351 (446)
++|++++.++ .|++||+.+++ +..+..|...+.+++|+|+|++|++++.++..++|+.....
T Consensus 433 ~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~ 511 (1045)
T 1k32_A 433 RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVS 511 (1045)
T ss_dssp CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCB
T ss_pred CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCcchhccccccccCc
Confidence 9998887654 89999999887 67788888889999999999999999987777777642110
Q ss_pred -----------------------------------cceEEEecCCCceEEEEEccCCCEEEE-------------EeCCC
Q 013282 352 -----------------------------------ESVAVLKGNLGAIRSIRYTSDGRYMAT-------------AEPAD 383 (446)
Q Consensus 352 -----------------------------------~~~~~~~~~~~~v~~l~~s~dg~~l~~-------------~~~dg 383 (446)
..+..+..|.+.+..++++|+|+++++ .....
T Consensus 512 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~ 591 (1045)
T 1k32_A 512 KPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKG 591 (1045)
T ss_dssp EEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCE
T ss_pred eeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCc
Confidence 122344456678899999999987775 12345
Q ss_pred eEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcc
Q 013282 384 FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 384 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
.|.+||+.+++.. .+. ..+.+++|||||++|++++.+ .+.
T Consensus 592 ~l~~~d~~~~~~~-~l~---~~v~~~~~S~DG~~l~~~~~~-~i~ 631 (1045)
T 1k32_A 592 VLLKYDVKTRKVT-EVK---NNLTDLRLSADRKTVMVRKDD-GKI 631 (1045)
T ss_dssp EEEEEETTTCCEE-EEE---EEEEEEEECTTSCEEEEEETT-SCE
T ss_pred eEEEEECCCCcEE-Eee---cCcceEEECCCCCEEEEEcCC-cEE
Confidence 7899999988643 232 568899999999999998766 443
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=9.6e-18 Score=158.77 Aligned_cols=241 Identities=12% Similarity=0.128 Sum_probs=159.3
Q ss_pred eEEecccCeEEEec----CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEE--eCCcEEEEec-cC
Q 013282 136 LVWATSKHDVYLMS----HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLA--VKDKLLVAGG-FQ 208 (446)
Q Consensus 136 l~~~~~~~~v~~~~----~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~--~~~~~l~tg~-~d 208 (446)
+.++.... +|... ++.|.+|+..++....+..+..+.. .+..++ .++++|++++ .+
T Consensus 45 ~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~----------------~p~~~a~spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 45 LALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGT----------------PPAYVAVDEARQLVYSANYHK 107 (347)
T ss_dssp EEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESC----------------CCSEEEEETTTTEEEEEETTT
T ss_pred EEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCC----------------CCEEEEECCCCCEEEEEeCCC
Confidence 44444333 55544 3678999986664433333221110 233444 4899888877 77
Q ss_pred CcEEEEEcCCCCeeeEEEEeecC---------CCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC-cceeeEe--ee--
Q 013282 209 GELICKHLDRPGVSFCSRTTYDD---------NAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKH--FR-- 274 (446)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~---------~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~--~~-- 274 (446)
+.|.+|++...+........... ...+..+.+ +|+|+ ++++...++.|++|++. +++.... +.
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~--spdg~-l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~ 184 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDL--TPDNR-LAVIDLGSDKVYVYNVSDAGQLSEQSVLTME 184 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEE--CTTSC-EEEEETTTTEEEEEEECTTSCEEEEEEEECC
T ss_pred CEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEE--CCCCc-EEEEeCCCCEEEEEEECCCCcEEEeeeEEcC
Confidence 99999999654432222222111 112455665 99998 78888888999999998 5544322 22
Q ss_pred CCCCeeEEEECCCCCEEEE-EecCCcEEEEECCC--Cce--EEEecCCC------CceeEEEECCCCCEE-EEEeCCCcE
Q 013282 275 FPWPVNHSSQSPDGKLLII-VGDNPDGLLVDSMT--GKT--IASLCGHL------DFSFASAWHPNGVTF-ATGNQDKTC 342 (446)
Q Consensus 275 ~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~--~~~--~~~~~~~~------~~v~~~~~~p~~~~l-~sgs~d~~v 342 (446)
....+..++|+|+|+++++ ...++.|.+|++.. ++. +..+.... ..+..++|+|+|++| +++..++.|
T Consensus 185 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v 264 (347)
T 3hfq_A 185 AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTL 264 (347)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEE
T ss_pred CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEE
Confidence 3346788999999997665 45688999999874 543 22333222 358889999999977 455568999
Q ss_pred EEEEccCCC--cceEEEecCCCceEEEEEccCCCEEEEEeCC-CeEEEE--EcCCCeeE
Q 013282 343 RIWDLRNLS--ESVAVLKGNLGAIRSIRYTSDGRYMATAEPA-DFVHVY--DVKSGYEK 396 (446)
Q Consensus 343 ~iwd~~~~~--~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d-g~i~iw--d~~~~~~~ 396 (446)
.+|++...+ ..+..+..+...+..++|+|+|++|++++.+ +.|.+| |..+++..
T Consensus 265 ~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 265 AVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 999996322 3455566666678899999999999888765 899999 55566543
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.82 E-value=1.4e-17 Score=157.19 Aligned_cols=228 Identities=15% Similarity=0.141 Sum_probs=160.2
Q ss_pred ecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEE-EEeccCCcEEEEEcCCCCeeeEEE
Q 013282 148 MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLL-VAGGFQGELICKHLDRPGVSFCSR 226 (446)
Q Consensus 148 ~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l-~tg~~dg~i~vw~~~~~~~~~~~~ 226 (446)
..++.|.+||..+++....+...+...+ .-.+++.+++++ +++..++.|.+|++.+..... .
T Consensus 18 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~---------------~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~--~ 80 (349)
T 1jmx_B 18 NYPNNLHVVDVASDTVYKSCVMPDKFGP---------------GTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTF--H 80 (349)
T ss_dssp ETTTEEEEEETTTTEEEEEEECSSCCSS---------------CEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE--E
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCCCC---------------ceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEE--E
Confidence 3467889999988765544443320000 122334477754 566678999999998764332 1
Q ss_pred EeecC-----CCceeeEEEEeCCCCCeEEEEEeCC------------CcEEEEecCcce---eeEeeeCCCCeeEEEECC
Q 013282 227 TTYDD-----NAITNAVEIYGSPSGAVHFTASNND------------CGVRDFDMGKYQ---LSKHFRFPWPVNHSSQSP 286 (446)
Q Consensus 227 ~~~~~-----~~~v~~i~~~~s~~~~~~l~s~s~d------------g~v~iwd~~~~~---~~~~~~~~~~v~~~~~sp 286 (446)
....+ ...+..+.+ +|+|+. +++++.+ +.|.+||+.+++ .+..+.++..+.+++|+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 81 ANLSSVPGEVGRSMYSFAI--SPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EESCCSTTEEEECSSCEEE--CTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEcccccccccccccceEE--CCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 11122 122456666 999985 5555544 899999998844 344555666789999999
Q ss_pred CCCEEEEEecCCcEEEEECCCCceEEEecCCC------------------------------------------------
Q 013282 287 DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL------------------------------------------------ 318 (446)
Q Consensus 287 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~------------------------------------------------ 318 (446)
+|+ +++++ +.|++||+.+++.+..+..+.
T Consensus 158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 65554 349999999998877665321
Q ss_pred --------------------CceeEEEECC-CCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEE
Q 013282 319 --------------------DFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMA 377 (446)
Q Consensus 319 --------------------~~v~~~~~~p-~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~ 377 (446)
..+.+++|+| +|++++++ ++.|.+||+.+ ++.+..+.. ...+.+++|+|+|++|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~-~~~~~~~~~-~~~~~~~~~s~dg~~l~ 310 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ-RKLIKAANL-DHTYYCVAFDKKGDKLY 310 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT-TEEEEEEEC-SSCCCEEEECSSSSCEE
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc-CeEEEEEcC-CCCccceEECCCCCEEE
Confidence 1345678889 99999988 88999999965 666666654 34577999999999888
Q ss_pred EEeCCCeEEEEEcCCCeeEeEeecc
Q 013282 378 TAEPADFVHVYDVKSGYEKEQEIDF 402 (446)
Q Consensus 378 ~~~~dg~i~iwd~~~~~~~~~~~~~ 402 (446)
+++.++.|++||+.+++.+..+...
T Consensus 311 ~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 311 LGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EESBSSEEEEEETTTTEEEEEEECS
T ss_pred EecCCCeEEEEeccccceeeeeecC
Confidence 8888999999999999877766543
No 159
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=1.7e-17 Score=158.51 Aligned_cols=232 Identities=12% Similarity=0.041 Sum_probs=158.2
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcC-CCCeeeEEEEeecCCCceeeEEEEeCCCCCe-EEEEEe-------------
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLD-RPGVSFCSRTTYDDNAITNAVEIYGSPSGAV-HFTASN------------- 254 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~-~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~-~l~s~s------------- 254 (446)
+..+++ ++++|++++.+ .|.+|++. ++.... ......+ +.+..+.+ +|+|+. ++++++
T Consensus 42 ~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~-~~~~~~~-g~~~~~~~--spdg~~l~~~~~~~~~~~~~~~~~~~ 116 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVH-EASHPIG-GHPRANDA--DTNTRAIFLLAAKQPPYAVYANPFYK 116 (365)
T ss_dssp CSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEE-EEEEECC-SSGGGGCT--TSCCEEEEEEECSSTTCCEEEEEESS
T ss_pred CcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEE-eeEeecC-CCCccEEE--CCCCCEEEEEEecCCcceeccceeec
Confidence 334444 89999988887 89999996 443221 1111111 22444555 999974 344543
Q ss_pred CCCcEEEEecC-cceeeEeee-----CCCCeeEEEECCCCCEEEEEec-CCcEEEEECC-CCceE--EEec--CCCCcee
Q 013282 255 NDCGVRDFDMG-KYQLSKHFR-----FPWPVNHSSQSPDGKLLIIVGD-NPDGLLVDSM-TGKTI--ASLC--GHLDFSF 322 (446)
Q Consensus 255 ~dg~v~iwd~~-~~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~~-d~~i~i~d~~-~~~~~--~~~~--~~~~~v~ 322 (446)
.++.+.+|++. .++....+. +...+.+++|+|+|++|+++.. ++.|++|++. +++.. ..+. .|...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 68999999997 465544333 3567999999999998887653 6799999998 77653 2333 2356789
Q ss_pred EEEECCCCCEEEEEeC-CCcEEEEEccC-CCcce---EEEec-------CCC------ceEEEE-EccCCCEEEEEeCC-
Q 013282 323 ASAWHPNGVTFATGNQ-DKTCRIWDLRN-LSESV---AVLKG-------NLG------AIRSIR-YTSDGRYMATAEPA- 382 (446)
Q Consensus 323 ~~~~~p~~~~l~sgs~-d~~v~iwd~~~-~~~~~---~~~~~-------~~~------~v~~l~-~s~dg~~l~~~~~d- 382 (446)
.++|+|+|+++++++. +++|.+|++.. .++.. ..+.. |.. .+..++ |+|||++|++++.+
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 9999999999988875 78999998753 23321 22221 121 488999 99999998877643
Q ss_pred C-----eEEEEEcC-CCeeEeE---eeccccCeEEEEEcC---CCCcEEEEEec-CCcc
Q 013282 383 D-----FVHVYDVK-SGYEKEQ---EIDFFGEISGISFSP---DTESLFIGVWD-RTYG 428 (446)
Q Consensus 383 g-----~i~iwd~~-~~~~~~~---~~~~~~~v~~~~~sp---dg~~l~~~~~D-~~~~ 428 (446)
+ .|.+|++. +++.... ...+...+..++|+| +|++|++++.+ +++.
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~ 335 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLE 335 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEE
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEE
Confidence 2 89999996 5654321 223445677899999 89999998765 4443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.81 E-value=1.2e-19 Score=188.96 Aligned_cols=215 Identities=14% Similarity=0.114 Sum_probs=154.3
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCC---ceeeEEEEeCCCCCeEEEEEeC---------CCcEEEEecC
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNA---ITNAVEIYGSPSGAVHFTASNN---------DCGVRDFDMG 265 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~---~v~~i~~~~s~~~~~~l~s~s~---------dg~v~iwd~~ 265 (446)
+++++++ +.+|+|++|++.++... .++.++.. .+..+.| ||+|+. |++++. ++.|++||+.
T Consensus 26 dg~~~~~-~~d~~i~~~~~~~g~~~---~~~~~~~~~~~~~~~~~~--SpDg~~-la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 26 GQEYLHQ-SADNNIVLYNIETGQSY---TILSNRTMKSVNASNYGL--SPDRQF-VYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp SSEEEEE-CTTSCEEEEESSSCCEE---EEECHHHHHTTTCSEEEE--CTTSSE-EEEEEEEEECSSSCEEEEEEEEETT
T ss_pred CCeEEEE-cCCCCEEEEEcCCCcEE---EEEccccccccceeeEEE--CCCCCe-EEEEecCceeEEeecceEEEEEECC
Confidence 7755554 46999999999877543 33333322 2566666 999985 555544 6899999999
Q ss_pred cceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe-cCCCCce-----------------eEEEEC
Q 013282 266 KYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CGHLDFS-----------------FASAWH 327 (446)
Q Consensus 266 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v-----------------~~~~~~ 327 (446)
+++.+........+..++|||||+.|+++. ++.|++|++.+++..... .++...+ .+++|+
T Consensus 99 ~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 99 NGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp TTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred CCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 988742222345689999999999999886 679999999988765432 2333222 489999
Q ss_pred CCCCEEEEEeCCC----------------------------------cEEEEEccCCCcce---E-----EEecCCCceE
Q 013282 328 PNGVTFATGNQDK----------------------------------TCRIWDLRNLSESV---A-----VLKGNLGAIR 365 (446)
Q Consensus 328 p~~~~l~sgs~d~----------------------------------~v~iwd~~~~~~~~---~-----~~~~~~~~v~ 365 (446)
|||++||+++.|. +|++||+.. ++.. . .+.+|...+.
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~-~~~~~~~~~~~~~~~~~~~~~~~ 256 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY-PAYVGPQEVPVPAMIASSDYYFS 256 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC-HHHHCCEECCCCHHHHTSCEEEE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC-CCccceeEccCCccCCCCcceEE
Confidence 9999999988652 788999964 4432 1 1335777899
Q ss_pred EEEEccCCCEEEEEeCC----CeEEEEE----cCCCeeEeEe----eccccCeE-----EEEEcCCCCcEEEE
Q 013282 366 SIRYTSDGRYMATAEPA----DFVHVYD----VKSGYEKEQE----IDFFGEIS-----GISFSPDTESLFIG 421 (446)
Q Consensus 366 ~l~~s~dg~~l~~~~~d----g~i~iwd----~~~~~~~~~~----~~~~~~v~-----~~~~spdg~~l~~~ 421 (446)
+++|+||++++++.... ..|.+|| +.+++....+ ..|.+.+. .+.|+|||+.|+..
T Consensus 257 ~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 329 (719)
T 1z68_A 257 WLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKI 329 (719)
T ss_dssp EEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEE
T ss_pred EeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEE
Confidence 99999998877765432 2488999 8777655444 35666666 88999999987764
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=1.6e-17 Score=159.53 Aligned_cols=225 Identities=12% Similarity=0.087 Sum_probs=156.8
Q ss_pred EEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEE---------------------
Q 013282 194 TLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTA--------------------- 252 (446)
Q Consensus 194 ~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s--------------------- 252 (446)
.++++++.|+.++.++.|++|++.+.... .+...+...+....+..+|++.. ++.
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~g~~~---~~~~~~~~~~~~~~~~~~~dg~~-l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 87 FLSPDDDALFYVKDGRNLMRVDLATLEEN---VVYQVPAEWVGYGTWVANSDCTK-LVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEE---EEEECCTTEEEEEEEEECTTSSE-EEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcce---eeeechhhcccccceeECCCCCe-eccccccCcccccccccchhhhhh
Confidence 35559999999999999999999887543 33344555555555555899884 442
Q ss_pred -EeCCCcEEEEecCcceeeEeeeCCCCeeEEEECC-CCCEEEEEecC------CcEEEEECCCCceEEEecCCC--Ccee
Q 013282 253 -SNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSP-DGKLLIIVGDN------PDGLLVDSMTGKTIASLCGHL--DFSF 322 (446)
Q Consensus 253 -~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--~~v~ 322 (446)
...+..|++||+.+++......+...+..++|+| +|+.|+.+... ..|.++|+..++. ..+..+. ..+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~ 241 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCT 241 (388)
T ss_dssp GGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEE
T ss_pred ccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccc
Confidence 2245789999999998777767777899999999 99999887753 3788888876554 3444444 3578
Q ss_pred EEEECCCCCEEEEEeC-CC----cEEEEEccCCCcc--eEEEecCCCc---eEEEEEccCCCEEEEE---------eCCC
Q 013282 323 ASAWHPNGVTFATGNQ-DK----TCRIWDLRNLSES--VAVLKGNLGA---IRSIRYTSDGRYMATA---------EPAD 383 (446)
Q Consensus 323 ~~~~~p~~~~l~sgs~-d~----~v~iwd~~~~~~~--~~~~~~~~~~---v~~l~~s~dg~~l~~~---------~~dg 383 (446)
.++|+|+|+.|+..+. ++ .|.+||+.. ++. +..+.++... ...++|+|||+.|+.. ..+.
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 242 HEFWVPDGSALVYVSYLKGSPDRFIYSADPET-LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEECTTSSCEEEEEEETTCCCEEEEEECTTT-CCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred cceECCCCCEEEEEecCCCCCcceEEEEecCC-CceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 8999999998766544 22 399999965 432 2233221100 1224799999988754 4466
Q ss_pred eEEEEEcCCCeeEeEeecccc-----------CeEEEEEcCCCCcEEEEEecC
Q 013282 384 FVHVYDVKSGYEKEQEIDFFG-----------EISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 384 ~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~spdg~~l~~~~~D~ 425 (446)
.|++||+.++.. ..+..+.. .+..++|+|||+.|+.++...
T Consensus 321 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~ 372 (388)
T 3pe7_A 321 FLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVH 372 (388)
T ss_dssp EEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTT
T ss_pred EEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCCEEEEEecCC
Confidence 899999998754 45555555 578899999999998877543
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.7e-18 Score=180.35 Aligned_cols=264 Identities=11% Similarity=0.002 Sum_probs=178.0
Q ss_pred eeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEecc-----
Q 013282 135 NLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF----- 207 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~----- 207 (446)
.+.|+.....++...++.|.+|+..+++...++...... ...+.+++| +|++|++++.
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~---------------~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMK---------------SVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHH---------------TTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEcccccc---------------ccceeeEEECCCCCeEEEEecCceeE
Confidence 344554444455556789999999888765554322100 001445555 9999999876
Q ss_pred ----CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee--CCCC---
Q 013282 208 ----QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWP--- 278 (446)
Q Consensus 208 ----dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~--- 278 (446)
++.|++|++.++.......+ ...+..+.| ||+|+. |+.+ .++.|++|++.+++...... +...
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l----~~~~~~~~~--SPDG~~-la~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~ 156 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL----PRPIQYLCW--SPVGSK-LAYV-YQNNIYLKQRPGDPPFQITFNGRENKIFN 156 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC----CSSBCCEEE--CSSTTC-EEEE-ETTEEEEESSTTSCCEECCCCCBTTTEEE
T ss_pred EeecceEEEEEECCCCccccceec----CcccccceE--CCCCCE-EEEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEc
Confidence 78999999987643100011 234566666 999985 5555 47899999998887655432 2221
Q ss_pred --------------eeEEEECCCCCEEEEEecCC----------------------------------cEEEEECCCCce
Q 013282 279 --------------VNHSSQSPDGKLLIIVGDNP----------------------------------DGLLVDSMTGKT 310 (446)
Q Consensus 279 --------------v~~~~~sp~~~~l~~~~~d~----------------------------------~i~i~d~~~~~~ 310 (446)
..+++|||||+.|++++.+. .|++||+.+++.
T Consensus 157 g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~ 236 (719)
T 1z68_A 157 GIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAY 236 (719)
T ss_dssp SSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHH
T ss_pred ccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCc
Confidence 24899999999999987542 788999998875
Q ss_pred E--------EEecCCCCceeEEEECCCCCEEEEEeCC----CcEEEEE----ccCCCcceEEE----ecCCCceE-----
Q 013282 311 I--------ASLCGHLDFSFASAWHPNGVTFATGNQD----KTCRIWD----LRNLSESVAVL----KGNLGAIR----- 365 (446)
Q Consensus 311 ~--------~~~~~~~~~v~~~~~~p~~~~l~sgs~d----~~v~iwd----~~~~~~~~~~~----~~~~~~v~----- 365 (446)
. ..+.+|...+.+++|+|+++++++.... ..|.+|| +.. +++...+ .+|.+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT-WDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS-EECCGGGEEEEECSSSCSSSSSCC
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC-CceEEEEecccccCCceEccccCC
Confidence 3 1234688889999999998877775432 2488899 643 4444333 46666676
Q ss_pred EEEEccCCCEEEE--EeCCC--eEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEec
Q 013282 366 SIRYTSDGRYMAT--AEPAD--FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 366 ~l~~s~dg~~l~~--~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
.++|+|||+.|+. +..+| .|.+||+.++. ...+..+...+..+.++ +++.|+..+.+
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~ 376 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNE 376 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESC
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEec
Confidence 8899999996554 44555 57777877765 44555566678888888 88888877765
No 163
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.79 E-value=5.5e-18 Score=177.06 Aligned_cols=226 Identities=16% Similarity=0.127 Sum_probs=156.7
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCce-e--eEEEEeCCCCCeEEEEEeCC---------C
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAIT-N--AVEIYGSPSGAVHFTASNND---------C 257 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v-~--~i~~~~s~~~~~~l~s~s~d---------g 257 (446)
..+++| ++.+|+++ +|+|++|++.++... .++..+.... . .-.+.|||+|+. |+.++.+ +
T Consensus 19 ~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~Spdg~~-l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS---VFLENSTFDEFGHSINDYSISPDGQF-ILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCEEECSSSEEEEEE--TTEEEEEETTTCCEE---EEECTTTTTTCCSCCCEEEECTTSSE-EEEEEEEEECSSSCEEE
T ss_pred ccccEECCCCcEEEEc--CCcEEEEECCCCceE---EEEechhhhhhcccccceEECCCCCE-EEEEECCeeeEEEccce
Confidence 345566 78888886 999999999887543 4444544221 1 112345999985 6666555 5
Q ss_pred cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe-cCCCCce---------------
Q 013282 258 GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CGHLDFS--------------- 321 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v--------------- 321 (446)
.+.+||+.+++......+...+..++|||||+.||.+. ++.|++|++.+++..+.. .++...+
T Consensus 93 ~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~ 171 (740)
T 4a5s_A 93 SYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFS 171 (740)
T ss_dssp EEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSS
T ss_pred EEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcC
Confidence 67799999998776555778899999999999998885 579999999888754421 2333222
Q ss_pred --eEEEECCCCCEEEEEeCCC------------------------------------cEEEEEccC---CCc-ceEEEe-
Q 013282 322 --FASAWHPNGVTFATGNQDK------------------------------------TCRIWDLRN---LSE-SVAVLK- 358 (446)
Q Consensus 322 --~~~~~~p~~~~l~sgs~d~------------------------------------~v~iwd~~~---~~~-~~~~~~- 358 (446)
.+++|||||+.||.++.|. +|++||+.. ... ....+.
T Consensus 172 ~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~ 251 (740)
T 4a5s_A 172 AYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITA 251 (740)
T ss_dssp SSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECC
T ss_pred CCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecC
Confidence 3489999999999886432 478888854 211 233343
Q ss_pred -----cCCCceEEEEEccCCCEEEEEeC----CCeEEEEEcCCCe----eE--eEe--eccccCeE-----EEEEcCCCC
Q 013282 359 -----GNLGAIRSIRYTSDGRYMATAEP----ADFVHVYDVKSGY----EK--EQE--IDFFGEIS-----GISFSPDTE 416 (446)
Q Consensus 359 -----~~~~~v~~l~~s~dg~~l~~~~~----dg~i~iwd~~~~~----~~--~~~--~~~~~~v~-----~~~~spdg~ 416 (446)
+|...+..++|+|||+.++.... +..|++||+.+++ +. ..+ ..+.+.|. .++|+|||+
T Consensus 252 ~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~ 331 (740)
T 4a5s_A 252 PASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN 331 (740)
T ss_dssp CHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS
T ss_pred CccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC
Confidence 26777999999999997765543 2369999999886 22 222 33554444 789999999
Q ss_pred cEE-EEEec
Q 013282 417 SLF-IGVWD 424 (446)
Q Consensus 417 ~l~-~~~~D 424 (446)
.|+ ..+..
T Consensus 332 ~l~~~~s~~ 340 (740)
T 4a5s_A 332 SFYKIISNE 340 (740)
T ss_dssp EEEEEEECT
T ss_pred EEEEEEEcC
Confidence 887 66544
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.76 E-value=5.8e-16 Score=147.76 Aligned_cols=221 Identities=9% Similarity=0.035 Sum_probs=148.3
Q ss_pred EEEEeccC--CcEEEEEcCCCC-eeeEEEEee-cCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC-cceeeEeeeC
Q 013282 201 LLVAGGFQ--GELICKHLDRPG-VSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG-KYQLSKHFRF 275 (446)
Q Consensus 201 ~l~tg~~d--g~i~vw~~~~~~-~~~~~~~~~-~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~-~~~~~~~~~~ 275 (446)
+|+.|+.. +.|.+|.++... ......... .....+..+.+ +|+|+ +|++++.+ .|.+|++. +++......+
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~--spdg~-~l~~~~~~-~v~~~~~~~~g~~~~~~~~ 79 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTF--DHERK-NIYGAAMK-KWSSFAVKSPTEIVHEASH 79 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEE--CTTSS-EEEEEEBT-EEEEEEEEETTEEEEEEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEE--CCCCC-EEEEEccc-eEEEEEECCCCCEEEeeEe
Confidence 35555543 568888775332 221111111 22234556666 99998 56777777 99999997 7776554432
Q ss_pred --CCCeeEEEECCCCCE--EEEEe-------------cCCcEEEEECC-CCceEEEec----CCCCceeEEEECCCCCEE
Q 013282 276 --PWPVNHSSQSPDGKL--LIIVG-------------DNPDGLLVDSM-TGKTIASLC----GHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 276 --~~~v~~~~~sp~~~~--l~~~~-------------~d~~i~i~d~~-~~~~~~~~~----~~~~~v~~~~~~p~~~~l 333 (446)
...+.+++|+|+|++ ++++. .++.+.+|++. .++....+. .+...+.+++|+|+|++|
T Consensus 80 ~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l 159 (365)
T 1jof_A 80 PIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYL 159 (365)
T ss_dssp ECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred ecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEE
Confidence 234667999999995 44442 68899999997 566554443 245678999999999988
Q ss_pred EEEeC-CCcEEEEEccCCCcc--eEEEe--cCCCceEEEEEccCCCEEEEEeC-CCeEEEEEcC--CCeeE---eEeec-
Q 013282 334 ATGNQ-DKTCRIWDLRNLSES--VAVLK--GNLGAIRSIRYTSDGRYMATAEP-ADFVHVYDVK--SGYEK---EQEID- 401 (446)
Q Consensus 334 ~sgs~-d~~v~iwd~~~~~~~--~~~~~--~~~~~v~~l~~s~dg~~l~~~~~-dg~i~iwd~~--~~~~~---~~~~~- 401 (446)
+++.. ++.|++||+...++. +..+. .|...++.++|+|+|++|++++. ++.|.+|++. +++.. ..+..
T Consensus 160 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 160 YSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 87764 679999999622332 23333 23557899999999999988775 6899999865 45432 12221
Q ss_pred ------ccc------CeEEEE-EcCCCCcEEEEEecC
Q 013282 402 ------FFG------EISGIS-FSPDTESLFIGVWDR 425 (446)
Q Consensus 402 ------~~~------~v~~~~-~spdg~~l~~~~~D~ 425 (446)
+.. .+.+++ |+|||++|+++..+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~ 276 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRAN 276 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEES
T ss_pred CCCcCCcccccccccccccEEEECCCCCEEEEECCCC
Confidence 111 488999 999999998876544
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.75 E-value=1.1e-15 Score=143.81 Aligned_cols=234 Identities=14% Similarity=0.100 Sum_probs=171.1
Q ss_pred eEEEEEe--CCcEEEEeccC------------------------CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCC
Q 013282 191 QVSTLAV--KDKLLVAGGFQ------------------------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSP 244 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~d------------------------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~ 244 (446)
.+.++++ +|+++++...+ +.|.+|+..++... ......+......+++ +|
T Consensus 25 ~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~--~~~~~~~~~~p~gia~--d~ 100 (329)
T 3fvz_A 25 QVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL--QSSGKNLFYLPHGLSI--DT 100 (329)
T ss_dssp CEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE--EEECTTTCSSEEEEEE--CT
T ss_pred CceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE--eccCCCccCCceEEEE--CC
Confidence 5888888 78888888777 47999998766543 1222233345667777 89
Q ss_pred CCCeEEEEEeCCCcEEEEecCcce-eeEeee----------CCCCeeEEEECC-CCCEEEEEe-cCCcEEEEECCCCceE
Q 013282 245 SGAVHFTASNNDCGVRDFDMGKYQ-LSKHFR----------FPWPVNHSSQSP-DGKLLIIVG-DNPDGLLVDSMTGKTI 311 (446)
Q Consensus 245 ~~~~~l~s~s~dg~v~iwd~~~~~-~~~~~~----------~~~~v~~~~~sp-~~~~l~~~~-~d~~i~i~d~~~~~~~ 311 (446)
+|. ++++...++.|++|+..... .+..+. +-.....++++| ++.++++.+ .++.|++|+ .+++.+
T Consensus 101 ~g~-l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~ 178 (329)
T 3fvz_A 101 DGN-YWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFV 178 (329)
T ss_dssp TSC-EEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TTSCEE
T ss_pred CCC-EEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEE
Confidence 998 78888888999999986542 444442 222578999999 788888876 689999999 667777
Q ss_pred EEecC----------CCCceeEEEECCC-CCEEEEEeCCCcEEEEEccCCCcceEEEe--cCCCceEEEEEccCCCEEEE
Q 013282 312 ASLCG----------HLDFSFASAWHPN-GVTFATGNQDKTCRIWDLRNLSESVAVLK--GNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 312 ~~~~~----------~~~~v~~~~~~p~-~~~l~sgs~d~~v~iwd~~~~~~~~~~~~--~~~~~v~~l~~s~dg~~l~~ 378 (446)
..+.. +......++++|+ +.++++...+++|++||..+ ++.+..+. .+...+.+++|+| |..+++
T Consensus 179 ~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~-G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~ 256 (329)
T 3fvz_A 179 TQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDT-KEFVREIKHASFGRNVFAISYIP-GFLFAV 256 (329)
T ss_dssp EEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTT-CCEEEEECCTTTTTCEEEEEEET-TEEEEE
T ss_pred EEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCC-CcEEEEEeccccCCCcceeeecC-CEEEEe
Confidence 77642 2234789999998 77788888899999999964 67777774 3556788999999 433333
Q ss_pred E-------eCCCeEEEEEcCCCeeEeEee---ccccCeEEEEEcCCCCcEEEEEecCCcceEEE
Q 013282 379 A-------EPADFVHVYDVKSGYEKEQEI---DFFGEISGISFSPDTESLFIGVWDRTYGSLLE 432 (446)
Q Consensus 379 ~-------~~dg~i~iwd~~~~~~~~~~~---~~~~~v~~~~~spdg~~l~~~~~D~~~~~~l~ 432 (446)
. ..+..|++|++.+++.+..+. .+...+.+|+++|+|..+++...++++..+-.
T Consensus 257 ~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 257 NGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp ECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEE
T ss_pred CCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeC
Confidence 3 334589999999998777763 56677999999999966666666666665543
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=2.6e-15 Score=142.91 Aligned_cols=242 Identities=10% Similarity=-0.012 Sum_probs=156.6
Q ss_pred CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec----------cCCcEEEEEcCCC
Q 013282 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG----------FQGELICKHLDRP 219 (446)
Q Consensus 150 ~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~----------~dg~i~vw~~~~~ 219 (446)
++.|.+||..+++....+... ..+-.+++.++++|+++. .++.|.+||+.+.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g------------------~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~ 91 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTA------------------FNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL 91 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECC------------------EEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC
T ss_pred cCeEEEEECCCCeEEEEecCC------------------CCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC
Confidence 567889998777544332211 002123344899998886 3678999999876
Q ss_pred CeeeEEEEeec---CCCceeeEEEEeCCCCCeEEEEEeC-CCcEEEEecCcceeeEe-eeCCCCeeEEEECCCC-CEEEE
Q 013282 220 GVSFCSRTTYD---DNAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKH-FRFPWPVNHSSQSPDG-KLLII 293 (446)
Q Consensus 220 ~~~~~~~~~~~---~~~~v~~i~~~~s~~~~~~l~s~s~-dg~v~iwd~~~~~~~~~-~~~~~~v~~~~~sp~~-~~l~~ 293 (446)
........... +......+.+ +|+|+.++++... +++|.+||+.+++.+.. +..... ..+.+.|++ ..+++
T Consensus 92 ~~~~~i~~~~~~~~~g~~p~~i~~--spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 92 TFEKEISLPPKRVQGLNYDGLFRQ--TTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMT 168 (361)
T ss_dssp CEEEEEEECTTBCCBCCCGGGEEE--CTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEE
T ss_pred cEEEEEEcCccccccCCCcceEEE--CCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEE
Confidence 65433322211 1223456666 9999954444433 68999999999988877 553321 113334432 33344
Q ss_pred EecCCcEEEEECCC-CceE-------------------------------------------------EEecC------C
Q 013282 294 VGDNPDGLLVDSMT-GKTI-------------------------------------------------ASLCG------H 317 (446)
Q Consensus 294 ~~~d~~i~i~d~~~-~~~~-------------------------------------------------~~~~~------~ 317 (446)
.+.+|.+.+|++.. ++.. ..+.- +
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~ 248 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKA 248 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccc
Confidence 44444444444322 2211 11100 0
Q ss_pred ----CCceeEEEECCCCCEEEEEeC-----------CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCC
Q 013282 318 ----LDFSFASAWHPNGVTFATGNQ-----------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA 382 (446)
Q Consensus 318 ----~~~v~~~~~~p~~~~l~sgs~-----------d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d 382 (446)
......++|+|+++.++++.. .++|.+||+.+ .+.+..+..+. +.+++|+|+|++|++++.
T Consensus 249 ~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t-~~~v~~i~~~~--p~~ia~spdg~~l~v~n~- 324 (361)
T 2oiz_A 249 KNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKT-KQRVARIPGRD--ALSMTIDQQRNLMLTLDG- 324 (361)
T ss_dssp TTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTT-TEEEEEEECTT--CCEEEEETTTTEEEEECS-
T ss_pred cccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCC-CcEEEEEecCC--eeEEEECCCCCEEEEeCC-
Confidence 011112789999888777643 34899999966 78888888876 889999999999998887
Q ss_pred CeEEEEEcCCC--eeEeEeeccccCeEEEEEcCCCC
Q 013282 383 DFVHVYDVKSG--YEKEQEIDFFGEISGISFSPDTE 416 (446)
Q Consensus 383 g~i~iwd~~~~--~~~~~~~~~~~~v~~~~~spdg~ 416 (446)
+.|.+||+.++ +.+..+..+......++|+|+|.
T Consensus 325 ~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 325 GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 99999999999 88887766777889999999986
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=2.8e-16 Score=151.06 Aligned_cols=231 Identities=13% Similarity=0.062 Sum_probs=155.4
Q ss_pred EEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceee---EE--------------EEeCCCCCeEEEEE---
Q 013282 194 TLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNA---VE--------------IYGSPSGAVHFTAS--- 253 (446)
Q Consensus 194 ~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~---i~--------------~~~s~~~~~~l~s~--- 253 (446)
.++++|++|+.++.++.|++|++...... .+...+...... +. ..++|+++.+++..
T Consensus 87 ~~spdg~~l~~~~~~~~l~~~d~~~~~~~---~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 87 FISTDERAFFYVKNELNLMKVDLETLEEQ---VIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp EECTTSSEEEEEETTTEEEEEETTTCCEE---EEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred eECCCCCEEEEEEcCCcEEEEECCCCCcE---EEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 34559999999999999999999776533 222223222111 10 12377776433322
Q ss_pred -eCCCcEEEEecCcceeeEeeeCCCCeeEEEECC-CCCEEEEEecC------CcEEEEECCCCceEEEecCCC--CceeE
Q 013282 254 -NNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSP-DGKLLIIVGDN------PDGLLVDSMTGKTIASLCGHL--DFSFA 323 (446)
Q Consensus 254 -s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d------~~i~i~d~~~~~~~~~~~~~~--~~v~~ 323 (446)
..+..|++||+.+++......+...+..+.|+| +++.|+.++.+ ..|.+||+.+++... +..+. ..+..
T Consensus 164 ~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~ 242 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTH 242 (396)
T ss_dssp TCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEE
T ss_pred CCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccc
Confidence 466789999999988776666777899999999 88877776543 468999987665433 33332 35788
Q ss_pred EEECCCCCEEEEEeCC-----CcEEEEEccCCCcceEEEecCCCceEEEEEcc-CCCEEEEEe----------------C
Q 013282 324 SAWHPNGVTFATGNQD-----KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTS-DGRYMATAE----------------P 381 (446)
Q Consensus 324 ~~~~p~~~~l~sgs~d-----~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~-dg~~l~~~~----------------~ 381 (446)
++|+|+|++|+.++.+ +.|++||+.. ++... +....+ .. +.|+| +|++|++++ .
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~-g~~~~-l~~~~~-~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 243 EFWIPDGSAMAYVSYFKGQTDRVIYKANPET-LENEE-VMVMPP-CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEECTTSSCEEEEEEETTTCCEEEEEECTTT-CCEEE-EEECCS-EE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred eEECCCCCEEEEEecCCCCccceEEEEECCC-CCeEE-eeeCCC-CC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 9999999988777654 4499999965 43322 222222 33 89999 999888765 3
Q ss_pred CCeEEEEEcCCCeeEeEeecccc-----------CeEEEEEcCCCCcEEEEEecCCcceEEEE
Q 013282 382 ADFVHVYDVKSGYEKEQEIDFFG-----------EISGISFSPDTESLFIGVWDRTYGSLLEY 433 (446)
Q Consensus 382 dg~i~iwd~~~~~~~~~~~~~~~-----------~v~~~~~spdg~~l~~~~~D~~~~~~l~~ 433 (446)
+..|++||+.++.. ..+..+.. .+..++|+|+|+.|+.++.+.....+...
T Consensus 319 ~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 319 DPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp CCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCcEEEEecccCce-EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 47899999988764 34444444 25678999999999888765433334333
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.74 E-value=3.1e-15 Score=137.38 Aligned_cols=231 Identities=11% Similarity=0.161 Sum_probs=163.2
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe---ecCCCceeeEEEEeCCCCCeEEEEEeC-CCcEEEEec
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDM 264 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~i~~~~s~~~~~~l~s~s~-dg~v~iwd~ 264 (446)
...++++ +++++++...++.|.+|+.. .......... ..+...+..+.+. .+++. ++++... ++.|++|+
T Consensus 31 ~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~-~~~g~-l~v~~~~~~~~i~~~d- 106 (286)
T 1q7f_A 31 EPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVV-RNSGD-IIVTERSPTHQIQIYN- 106 (286)
T ss_dssp CEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEE-TTTTE-EEEEECGGGCEEEEEC-
T ss_pred CCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEE-cCCCe-EEEEcCCCCCEEEEEC-
Confidence 3666776 78888888899999999976 3322111110 0122345555551 35554 5555533 88999999
Q ss_pred CcceeeEeee--CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec--CCCCceeEEEECCCCCEEEEEeCCC
Q 013282 265 GKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 265 ~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
.+++.+..+. ....+..++++|+|+++++...++.|++||. .++.+..+. ++...+..++++|+|+++++.+.++
T Consensus 107 ~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 185 (286)
T 1q7f_A 107 QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAH 185 (286)
T ss_dssp TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGT
T ss_pred CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCC
Confidence 5677666665 3356899999999998787778899999996 466666664 3455789999999999888888899
Q ss_pred cEEEEEccCCCcceEEEecC--CCceEEEEEccCCCEEEEEeCCC-eEEEEEcCCCeeEeEeeccc--cCeEEEEEcCCC
Q 013282 341 TCRIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPAD-FVHVYDVKSGYEKEQEIDFF--GEISGISFSPDT 415 (446)
Q Consensus 341 ~v~iwd~~~~~~~~~~~~~~--~~~v~~l~~s~dg~~l~~~~~dg-~i~iwd~~~~~~~~~~~~~~--~~v~~~~~spdg 415 (446)
.|++||.. +..+..+..+ ...+..++++|+|+++++...++ .|.+|+. +++.+..+..+. ..+.+++++|+|
T Consensus 186 ~i~~~~~~--g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g 262 (286)
T 1q7f_A 186 CVKVFNYE--GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDG 262 (286)
T ss_dssp EEEEEETT--CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTT
T ss_pred EEEEEcCC--CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCC
Confidence 99999983 4556666443 35788999999999888887775 9999995 455565555443 247899999999
Q ss_pred CcEEEEEecCCcceE
Q 013282 416 ESLFIGVWDRTYGSL 430 (446)
Q Consensus 416 ~~l~~~~~D~~~~~~ 430 (446)
+++++ ..|+++..|
T Consensus 263 ~l~vs-~~~~~v~v~ 276 (286)
T 1q7f_A 263 SVVLA-SKDYRLYIY 276 (286)
T ss_dssp EEEEE-ETTTEEEEE
T ss_pred cEEEE-CCCCeEEEE
Confidence 75554 666655443
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2.5e-16 Score=162.35 Aligned_cols=235 Identities=10% Similarity=-0.026 Sum_probs=159.0
Q ss_pred eEEEEEeCCcE--EEEe--ccCCcEEEEEcCCCCeeeEEEEeecCCCcee---------eEEEEeCCCCCe-EEEEEeCC
Q 013282 191 QVSTLAVKDKL--LVAG--GFQGELICKHLDRPGVSFCSRTTYDDNAITN---------AVEIYGSPSGAV-HFTASNND 256 (446)
Q Consensus 191 ~v~~l~~~~~~--l~tg--~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~---------~i~~~~s~~~~~-~l~s~s~d 256 (446)
.+..++++++. ++.+ +.++...||.....+.. ..+..+...+. ...+..||+|+. ++++...+
T Consensus 25 ~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 25 RPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE---ESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp CCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE---EESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred ccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc---ceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 57777774444 4444 44788999986444332 22223333333 343433499986 55555456
Q ss_pred CcEEEEecC--c-ceeeEeee-----CCCCeeEEEECCCCCEEEEEecC----------CcEEEEECCC------CceEE
Q 013282 257 CGVRDFDMG--K-YQLSKHFR-----FPWPVNHSSQSPDGKLLIIVGDN----------PDGLLVDSMT------GKTIA 312 (446)
Q Consensus 257 g~v~iwd~~--~-~~~~~~~~-----~~~~v~~~~~sp~~~~l~~~~~d----------~~i~i~d~~~------~~~~~ 312 (446)
..|+++++. + ++...... +...+..++|+|||+.|++++.+ ..|++||+.+ ++. .
T Consensus 102 ~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~ 180 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-R 180 (662)
T ss_dssp CCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-E
T ss_pred CeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-e
Confidence 778888876 3 54433333 34568899999999999988876 5899999987 554 4
Q ss_pred Eec-CCCCceeEEEECCCCCEEEEEeCCC--------cEEEEEccCCC---cceEEEecCCCceEEEEEccCCCEEEEEe
Q 013282 313 SLC-GHLDFSFASAWHPNGVTFATGNQDK--------TCRIWDLRNLS---ESVAVLKGNLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 313 ~~~-~~~~~v~~~~~~p~~~~l~sgs~d~--------~v~iwd~~~~~---~~~~~~~~~~~~v~~l~~s~dg~~l~~~~ 380 (446)
.+. .+...+..++|+|+|++|+.++.++ .|++||+...+ ........+...+..++|+|||+++++++
T Consensus 181 ~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~ 260 (662)
T 3azo_A 181 ELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATD 260 (662)
T ss_dssp ESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEEC
T ss_pred EEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEEC
Confidence 555 5667888899999999999888653 79999996324 34444445578899999999999888888
Q ss_pred CCC--eEEEEEcCCCeeEeEeeccccC--------eEEEEEcCCCCcEEEEEecCCcceE
Q 013282 381 PAD--FVHVYDVKSGYEKEQEIDFFGE--------ISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 381 ~dg--~i~iwd~~~~~~~~~~~~~~~~--------v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
.++ .|.+||+.++........+... +..++|+|++++++++.. +.+..+
T Consensus 261 ~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~ 319 (662)
T 3azo_A 261 RTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLG 319 (662)
T ss_dssp TTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEE
T ss_pred CCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEE
Confidence 888 6777777666543322222221 567899999998888776 554433
No 170
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=3.5e-15 Score=155.77 Aligned_cols=266 Identities=12% Similarity=0.055 Sum_probs=173.0
Q ss_pred eeeeEEecccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceE--EEEEeCCcEEEEeccC--
Q 013282 133 LRNLVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQV--STLAVKDKLLVAGGFQ-- 208 (446)
Q Consensus 133 ~~~l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v--~~l~~~~~~l~tg~~d-- 208 (446)
...+.|......++.. ++.|.+|+..+++...++. ++.... + .... .++++||++|+.++.+
T Consensus 19 ~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~--~~~~~~----------~-~~~~~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLE--NSTFDE----------F-GHSINDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEEC--TTTTTT----------C-CSCCCEEEECTTSSEEEEEEEEEE
T ss_pred ccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEe--chhhhh----------h-cccccceEECCCCCEEEEEECCee
Confidence 3355566655445444 8999999999987655543 321110 0 0123 3556699999999876
Q ss_pred -------CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee--CCCCe
Q 013282 209 -------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPV 279 (446)
Q Consensus 209 -------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v 279 (446)
+.+.+|++.++... .+..+.+.+....| ||+|+. |+.+ .++.|++|++.+++..+... ....+
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~----~l~~~~~~~~~~~~--SPdG~~-la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI----TEERIPNNTQWVTW--SPVGHK-LAYV-WNNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC----CSSCCCTTEEEEEE--CSSTTC-EEEE-ETTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred eEEEccceEEEEEECCCCcEE----EcccCCCcceeeEE--CCCCCE-EEEE-ECCeEEEEECCCCceEEEcCCCCccce
Confidence 66679999876422 23345556666666 999995 5554 56899999998877554322 11112
Q ss_pred -----------------eEEEECCCCCEEEEEecCC------------------------------------cEEEEECC
Q 013282 280 -----------------NHSSQSPDGKLLIIVGDNP------------------------------------DGLLVDSM 306 (446)
Q Consensus 280 -----------------~~~~~sp~~~~l~~~~~d~------------------------------------~i~i~d~~ 306 (446)
..+.|||||+.|+.++.|. .|++||+.
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 3588999999998875321 48889998
Q ss_pred C---Cc--eEEEec------CCCCceeEEEECCCCCEEEEEeC----CCcEEEEEccCCCc------ceEEE--ecCCCc
Q 013282 307 T---GK--TIASLC------GHLDFSFASAWHPNGVTFATGNQ----DKTCRIWDLRNLSE------SVAVL--KGNLGA 363 (446)
Q Consensus 307 ~---~~--~~~~~~------~~~~~v~~~~~~p~~~~l~sgs~----d~~v~iwd~~~~~~------~~~~~--~~~~~~ 363 (446)
+ ++ ....+. +|...+..++|+|+|+.++.... +..|++||+.. ++ .+..+ .+|.+.
T Consensus 237 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~t-g~~~~~~~~~~~l~~~~~~~~ 315 (740)
T 4a5s_A 237 SLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDE-SSGRWNCLVARQHIEMSTTGW 315 (740)
T ss_dssp SCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEET-TTTEEEECGGGCEEEECSSSC
T ss_pred CCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCC-CccccceeEEEEeeeccCCce
Confidence 8 73 233343 37788999999999997766543 33799999966 43 12222 456655
Q ss_pred eE-----EEEEccCCCEEE-EEeC-CC--eEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 364 IR-----SIRYTSDGRYMA-TAEP-AD--FVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 364 v~-----~l~~s~dg~~l~-~~~~-dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
|. .++|+|||+.|+ ..+. +| .|++||+.++... ++......|..+.+ ++++.|+..+.
T Consensus 316 v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~ 382 (740)
T 4a5s_A 316 VGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISN 382 (740)
T ss_dssp SSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEES
T ss_pred EccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEe
Confidence 54 789999999877 6653 44 5888898876543 44444556666542 44666665544
No 171
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.72 E-value=4.3e-15 Score=137.28 Aligned_cols=220 Identities=15% Similarity=0.098 Sum_probs=160.4
Q ss_pred EEEEEe--CCc-EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~--~~~-~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
..+++| +++ +++++..++.|..|+.... . ..+..+...+.++.+ +++|. ++++...++.|.+||..+++
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~----~~~~~~~~~~~~l~~--~~dg~-l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L----SPEMHPSHHQNGHCL--NKQGH-LIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E----EEEESSCSSEEEEEE--CTTCC-EEEEETTTTEEEEECSTTCC
T ss_pred ccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e----EEEECCCCCcceeeE--CCCCc-EEEEecCCCeEEEEcCCCCc
Confidence 445566 676 7888999999999998765 2 223345556777776 89987 56666667899999998877
Q ss_pred eeEeee-----CCCCeeEEEECCCCCEEEEE----e-------------cCCcEEEEECCCCceEEEecCCCCceeEEEE
Q 013282 269 LSKHFR-----FPWPVNHSSQSPDGKLLIIV----G-------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAW 326 (446)
Q Consensus 269 ~~~~~~-----~~~~v~~~~~sp~~~~l~~~----~-------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 326 (446)
...... ....++.++++|+|+++++. + ..+.|..++.. ++ +..+..+......++|
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~ 179 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAF 179 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-EEEEECCCSSEEEEEE
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CC-EEEeecCCCCCccEEE
Confidence 654432 12346789999999988873 2 13456666655 44 3444556677889999
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCCcc---eEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc
Q 013282 327 HPNGVTFATGNQDKTCRIWDLRNLSES---VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 403 (446)
Q Consensus 327 ~p~~~~l~sgs~d~~v~iwd~~~~~~~---~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 403 (446)
+|+|+.+++.+.++.|.+|++...+.. ...+..+.+.+.+++++++|+++++. ++.|.+||.. ++.+..+..+.
T Consensus 180 s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~ 256 (296)
T 3e5z_A 180 LPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQ 256 (296)
T ss_dssp CTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSS
T ss_pred CCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCC
Confidence 999999877778899999999633433 23333345567889999999866655 7889999986 66777776666
Q ss_pred cCeEEEEE-cCCCCcEEEEEecC
Q 013282 404 GEISGISF-SPDTESLFIGVWDR 425 (446)
Q Consensus 404 ~~v~~~~~-spdg~~l~~~~~D~ 425 (446)
. +.+++| +|+++.|++++.++
T Consensus 257 ~-~~~~~f~~~d~~~L~v~t~~~ 278 (296)
T 3e5z_A 257 T-TSNLCFGGPEGRTLYMTVSTE 278 (296)
T ss_dssp C-CCEEEEESTTSCEEEEEETTE
T ss_pred C-ceeEEEECCCCCEEEEEcCCe
Confidence 6 999999 68999999988763
No 172
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=8.8e-14 Score=130.56 Aligned_cols=234 Identities=14% Similarity=0.111 Sum_probs=162.2
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC----CcEEEEecC
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMG 265 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d----g~v~iwd~~ 265 (446)
+.++++ ++++++++..++.|.+|+..+.... .....+...+.++.+ +++|. ++++...+ +.|.+||..
T Consensus 47 ~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~---~~~~~~~~~~~~i~~--~~dg~-l~v~~~~~~~~~~~i~~~d~~ 120 (333)
T 2dg1_A 47 LEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK---RPFVSHKANPAAIKI--HKDGR-LFVCYLGDFKSTGGIFAATEN 120 (333)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEE---EEEECSSSSEEEEEE--CTTSC-EEEEECTTSSSCCEEEEECTT
T ss_pred ccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE---EEeeCCCCCcceEEE--CCCCc-EEEEeCCCCCCCceEEEEeCC
Confidence 456666 7788888889999999998766533 222234456777776 89987 56666555 689999998
Q ss_pred cceeeEeee---CCCCeeEEEECCCCCEEEEEec------CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEE-
Q 013282 266 KYQLSKHFR---FPWPVNHSSQSPDGKLLIIVGD------NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT- 335 (446)
Q Consensus 266 ~~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s- 335 (446)
+++....+. ....+..++++|+|+++++... .+.|..+|..+++... +..+...+..++|+|+|+.|+.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~v~ 199 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLWVT 199 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEEEE
Confidence 876653332 3456899999999987776653 3567777766655443 3233445788999999986654
Q ss_pred EeCCCcEEEEEccCCCcceEE--------EecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc---
Q 013282 336 GNQDKTCRIWDLRNLSESVAV--------LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG--- 404 (446)
Q Consensus 336 gs~d~~v~iwd~~~~~~~~~~--------~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--- 404 (446)
.+.++.|.+||+...+..+.. +.++ ..+..++++++|+++++...++.|.+||. +++.+..+..+..
T Consensus 200 ~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g 277 (333)
T 2dg1_A 200 ETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEG 277 (333)
T ss_dssp EGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGT
T ss_pred eCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccc
Confidence 455789999999643333221 1122 36788999999998887777889999998 4555555543332
Q ss_pred ---CeEEEEEcCCCCcEEEEEecCC---cceEEEEe
Q 013282 405 ---EISGISFSPDTESLFIGVWDRT---YGSLLEYG 434 (446)
Q Consensus 405 ---~v~~~~~spdg~~l~~~~~D~~---~~~~l~~~ 434 (446)
.+.+++|+|+++.|++++.++. -+.++.+.
T Consensus 278 ~~~~~~~~~~~~dg~~L~v~~~~g~~~~~~~l~~~~ 313 (333)
T 2dg1_A 278 HMLRSTHPQFIPGTNQLIICSNDIEMGGGSMLYTVN 313 (333)
T ss_dssp CSCBCCEEEECTTSCEEEEEEECGGGTCCEEEEEEE
T ss_pred cccCcceEEECCCCCEEEEEeCccCCCCCceEEEEe
Confidence 6899999999988887777642 33455443
No 173
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=9.3e-15 Score=138.00 Aligned_cols=217 Identities=12% Similarity=0.076 Sum_probs=149.4
Q ss_pred eEEEEEeCCcEEEEec---------cCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC--C--
Q 013282 191 QVSTLAVKDKLLVAGG---------FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND--C-- 257 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~---------~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d--g-- 257 (446)
.+...+++|+.|+... .++.|.+|++..+... .+ ..+..+.| +|+|+.++++.... +
T Consensus 16 ~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~---~l-----~~~~~~~~--SpDg~~la~~~~~~~~~~~ 85 (347)
T 2gop_A 16 YLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARR---FI-----ENATMPRI--SPDGKKIAFMRANEEKKVS 85 (347)
T ss_dssp EEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE---EE-----ESCEEEEE--CTTSSEEEEEEEETTTTEE
T ss_pred EcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceE---Ec-----ccCCCeEE--CCCCCEEEEEEeccCCCcc
Confidence 3555555888887642 3677999999776532 22 23455555 99998644444332 3
Q ss_pred cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecC---------------------------CcEEEEECCCCce
Q 013282 258 GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN---------------------------PDGLLVDSMTGKT 310 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---------------------------~~i~i~d~~~~~~ 310 (446)
.|++|++.+++......... +..++|+|+|+.|+.++.+ ..|++||+.+++.
T Consensus 86 ~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 86 EIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp EEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred eEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 48888998888777666555 9999999999999887632 5799999998887
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEEeCCC-------cEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCC-
Q 013282 311 IASLCGHLDFSFASAWHPNGVTFATGNQDK-------TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA- 382 (446)
Q Consensus 311 ~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~-------~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d- 382 (446)
+..+.. . .+..++|+|+| ++++++.++ ...||.+. .++ ...+..+ ..+..+ +|+|++|+.++.+
T Consensus 165 ~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d-~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~ 236 (347)
T 2gop_A 165 IEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE-DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPE 236 (347)
T ss_dssp EEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE-TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCS
T ss_pred EeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC-CCc-eEEeccC-cceeeE--CCCCCEEEEEEccc
Confidence 555654 4 78899999999 888776642 45666664 344 3444444 555554 9999988877754
Q ss_pred -------CeEEEEEcCCCeeEeEeeccccCeEE-EEEcCCCCcEEEEEecCCcceE
Q 013282 383 -------DFVHVYDVKSGYEKEQEIDFFGEISG-ISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 383 -------g~i~iwd~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~D~~~~~~ 430 (446)
..|.+|| ++........+...+.. +.|+ +| +++++..++.+..+
T Consensus 237 ~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 237 KKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY 288 (347)
T ss_dssp SSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE
T ss_pred cCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE
Confidence 3688888 55444333345667886 9999 88 88888888765544
No 174
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.69 E-value=2.5e-14 Score=134.97 Aligned_cols=237 Identities=11% Similarity=0.089 Sum_probs=157.1
Q ss_pred CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccC---C--cEEEEEcCCCCee
Q 013282 150 HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQ---G--ELICKHLDRPGVS 222 (446)
Q Consensus 150 ~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~d---g--~i~vw~~~~~~~~ 222 (446)
...|.+|+..+++...+ . .+..++| +|++|+.++.+ + .|.+|++..+...
T Consensus 42 ~~~l~~~d~~~~~~~~l---~--------------------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~ 98 (347)
T 2gop_A 42 ENTIVIENLKNNARRFI---E--------------------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK 98 (347)
T ss_dssp EEEEEEEETTTCCEEEE---E--------------------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE
T ss_pred cceEEEEeCCCCceEEc---c--------------------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE
Confidence 35678888877654332 1 2445555 89999888754 3 3777777654322
Q ss_pred eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC--------------------------CCcEEEEecCcceeeEeeeCC
Q 013282 223 FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN--------------------------DCGVRDFDMGKYQLSKHFRFP 276 (446)
Q Consensus 223 ~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~--------------------------dg~v~iwd~~~~~~~~~~~~~ 276 (446)
.+.... . +..+.| +|+|+.+++++.. ...|++||+.+++.+..+..+
T Consensus 99 ---~l~~~~-~-~~~~~w--spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~ 171 (347)
T 2gop_A 99 ---KILEAK-N-IRSLEW--NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP 171 (347)
T ss_dssp ---EEEEES-E-EEEEEE--CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEEE
T ss_pred ---EEEcCC-C-ccceeE--CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecCC
Confidence 233222 2 555555 9999865554432 257999999988873444334
Q ss_pred CCeeEEEECCCCCEEEEEecCC---------cEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCC--------
Q 013282 277 WPVNHSSQSPDGKLLIIVGDNP---------DGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD-------- 339 (446)
Q Consensus 277 ~~v~~~~~sp~~~~l~~~~~d~---------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d-------- 339 (446)
.+..+.|+|+| +++++..++ .|+++| +++ ...+..+ ..+..+ +|+|++|+.++.+
T Consensus 172 -~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~ 243 (347)
T 2gop_A 172 -RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEH 243 (347)
T ss_dssp -TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSS
T ss_pred -CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCcccc
Confidence 78899999999 777775432 355555 554 3444444 445444 9999999887754
Q ss_pred CcEEEEEccCCCcceEEEecCCCceEE-EEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcE
Q 013282 340 KTCRIWDLRNLSESVAVLKGNLGAIRS-IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESL 418 (446)
Q Consensus 340 ~~v~iwd~~~~~~~~~~~~~~~~~v~~-l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l 418 (446)
..|.+|| . ++.......+...+.. +.|+ +| ++++++.++.++|| +.++.. ..+..+.+.|.+++|+| ..+
T Consensus 244 ~~l~~~d--~-~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~ 314 (347)
T 2gop_A 244 NKLYIYD--G-KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVV 314 (347)
T ss_dssp CEEEEEC--S-SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSE-EEEECSSSEEEEEEESS--SEE
T ss_pred ceEEEEC--C-CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEE
Confidence 3577777 2 4444444455677886 9999 98 88999999999999 876644 44555677899999999 677
Q ss_pred EEEEecCCcceEEEE
Q 013282 419 FIGVWDRTYGSLLEY 433 (446)
Q Consensus 419 ~~~~~D~~~~~~l~~ 433 (446)
++++.++....+..+
T Consensus 315 ~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 315 YLKETATRLRELFTW 329 (347)
T ss_dssp EEEECSSSCCEEEEE
T ss_pred EEEcCCCChHHheEe
Confidence 777777776555544
No 175
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=6.6e-15 Score=141.22 Aligned_cols=220 Identities=13% Similarity=0.109 Sum_probs=146.3
Q ss_pred EEeCCcEEEEecc-CCc--EEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeE
Q 013282 195 LAVKDKLLVAGGF-QGE--LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK 271 (446)
Q Consensus 195 l~~~~~~l~tg~~-dg~--i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~ 271 (446)
++++|++|+.++. +|. |.+|++.+... ..++.++...+..+.| +|+|+ .|+.++.++.|++||+.+++...
T Consensus 43 ~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~---~~lt~~~~~~~~~~~~--spdg~-~l~~~~~~~~l~~~d~~~g~~~~ 116 (388)
T 3pe7_A 43 FTRDGSKLLFGGAFDGPWNYYLLDLNTQVA---TQLTEGRGDNTFGGFL--SPDDD-ALFYVKDGRNLMRVDLATLEENV 116 (388)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTCEE---EECCCSSCBCSSSCEE--CTTSS-EEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCCCEEEEEEcCCCCceEEEEeCCCCce---EEeeeCCCCCccceEE--cCCCC-EEEEEeCCCeEEEEECCCCccee
Confidence 4458999998887 674 77778766532 3444445444434455 99998 47777788999999999988777
Q ss_pred eeeCCCC-eeEE--EECCCCCEEEEEe----------------------cCCcEEEEECCCCceEEEecCCCCceeEEEE
Q 013282 272 HFRFPWP-VNHS--SQSPDGKLLIIVG----------------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAW 326 (446)
Q Consensus 272 ~~~~~~~-v~~~--~~sp~~~~l~~~~----------------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 326 (446)
.+..+.. +... .++|++++++... .+..|++||+.+++.. .+..+...+..++|
T Consensus 117 ~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~ 195 (388)
T 3pe7_A 117 VYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIY 195 (388)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEE
T ss_pred eeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEE
Confidence 6664333 3333 3489999887532 3467999999988754 44456778899999
Q ss_pred CC-CCCEEEEEeCC------CcEEEEEccCCCcceEEEecCC--CceEEEEEccCCCEEEEEeC-CC----eEEEEEcCC
Q 013282 327 HP-NGVTFATGNQD------KTCRIWDLRNLSESVAVLKGNL--GAIRSIRYTSDGRYMATAEP-AD----FVHVYDVKS 392 (446)
Q Consensus 327 ~p-~~~~l~sgs~d------~~v~iwd~~~~~~~~~~~~~~~--~~v~~l~~s~dg~~l~~~~~-dg----~i~iwd~~~ 392 (446)
+| +|+.|+.++.. ..|.++|+. +.....+..+. ..+..++|+|||+.|+..+. ++ .|++||+.+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~--~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 196 RPYDDSTVAFCHEGPHDLVDARMWLINED--GTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp ETTEEEEEEEEECSCTTTSSCSEEEEETT--SCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred CCCCCCEEEEEEecCCCCCcceEEEEeCC--CCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 99 99999887763 267777774 33445555444 35778999999997765443 22 399999998
Q ss_pred CeeEe--Eeeccc---cCeEEEEEcCCCCcEEEEEe
Q 013282 393 GYEKE--QEIDFF---GEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 393 ~~~~~--~~~~~~---~~v~~~~~spdg~~l~~~~~ 423 (446)
++... ....+. .....+.|+|||+.|+....
T Consensus 274 g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 309 (388)
T 3pe7_A 274 LENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQ 309 (388)
T ss_dssp CCEEEEEEECCEEEEEECTTSSEEEEEECCC-----
T ss_pred CceEEEEcCCCceeeeecCCCCeEccCCCcceeEee
Confidence 86432 221110 01223479999998886543
No 176
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.68 E-value=9.2e-15 Score=150.62 Aligned_cols=214 Identities=13% Similarity=0.056 Sum_probs=143.5
Q ss_pred eCCcE-EEEecc-CCcEEEEEcC--CCCeeeEEEEeec----CCCceeeEEEEeCCCCCeEEEEEeCC----------Cc
Q 013282 197 VKDKL-LVAGGF-QGELICKHLD--RPGVSFCSRTTYD----DNAITNAVEIYGSPSGAVHFTASNND----------CG 258 (446)
Q Consensus 197 ~~~~~-l~tg~~-dg~i~vw~~~--~~~~~~~~~~~~~----~~~~v~~i~~~~s~~~~~~l~s~s~d----------g~ 258 (446)
++|+. |+.++. +..|.++++. ..+.. ..+... +...+..+.| +|+|+. |++++.+ ..
T Consensus 88 PDg~~~la~~~~~~~~l~~~~~~~~g~~~~--~~l~~~~~~~~~~~~~~~~~--spDg~~-l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 88 PAGGPLLVFTHFGDQRLYAFEPDAPGGAVP--RPLTPVSAVGGGLRWADPVL--LPERGE-VWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp SSSSCEEEEEBTTTCCEEEECTTSTTCCCC--EECSCCCCSTTCEEEEEEEE--ETTTTE-EEEEEEEECSSSTTCEEEE
T ss_pred cCCCeEEEEEECCCCeEEEEcCCCCCCCCC--EeccCCccCCCCccccCcEE--CCCCCE-EEEEEecccCCCCCCceeE
Confidence 67887 666544 5566666664 20221 122221 3445555555 999985 6555555 58
Q ss_pred EEEEecCc------ceeeEee-eCCCCeeEEEECCCCCEEEEEecC--------CcEEEEECC-CC---ceEEEecCCCC
Q 013282 259 VRDFDMGK------YQLSKHF-RFPWPVNHSSQSPDGKLLIIVGDN--------PDGLLVDSM-TG---KTIASLCGHLD 319 (446)
Q Consensus 259 v~iwd~~~------~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~ 319 (446)
|++|++.+ ++..... .+...+..++|||||++|+.++.+ ..|++||+. ++ +......+|..
T Consensus 163 i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~ 242 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE 242 (662)
T ss_dssp EEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB
T ss_pred EEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc
Confidence 99999988 6665555 455668889999999999887754 379999998 57 44444445678
Q ss_pred ceeEEEECCCCCEEEEEeCCC--cEEEEEccCCCcceEEEecCCCc--------eEEEEEccCCCEEEEEeCCCeEEEE-
Q 013282 320 FSFASAWHPNGVTFATGNQDK--TCRIWDLRNLSESVAVLKGNLGA--------IRSIRYTSDGRYMATAEPADFVHVY- 388 (446)
Q Consensus 320 ~v~~~~~~p~~~~l~sgs~d~--~v~iwd~~~~~~~~~~~~~~~~~--------v~~l~~s~dg~~l~~~~~dg~i~iw- 388 (446)
.+..++|+|+|+++++++.++ .|.+||+.. ++.......+... +.+++|+|+++++++++. +.++||
T Consensus 243 ~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 320 (662)
T 3azo_A 243 AIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-GAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGI 320 (662)
T ss_dssp CEEEEEECTTSCEEEEECTTSSCEEEEECTTT-CCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEE
T ss_pred eEcceEECCCCeEEEEECCCCCeEEEEEECCC-CceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEE
Confidence 899999999999888888888 455555532 3333222222221 567899999999999998 999999
Q ss_pred -EcCCCeeEeEeeccccCeEEEEEcCCCCcEE
Q 013282 389 -DVKSGYEKEQEIDFFGEISGISFSPDTESLF 419 (446)
Q Consensus 389 -d~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 419 (446)
|+.++. +..+..+.+.+..+ +++++..++
T Consensus 321 ~d~~~~~-~~~l~~~~~~~~~~-~s~~~~~~~ 350 (662)
T 3azo_A 321 LDPESGE-LVDAAGPWTEWAAT-LTVSGTRAV 350 (662)
T ss_dssp EETTTTE-EEECCSSCCEEEEE-EEEETTEEE
T ss_pred EECCCCc-EEEecCCCCeEEEE-EecCCCEEE
Confidence 666664 56666677777766 144555444
No 177
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=5.3e-14 Score=128.52 Aligned_cols=211 Identities=12% Similarity=0.026 Sum_probs=165.2
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCC-CceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN-AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP 276 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~-~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 276 (446)
.+++|++++.++.|.+||..+++..... ..+. ..+..+.+ +|+|+ +++ +.++.|+.||. +++.+..+..+
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~---~~~~~~~~~~~~~--~pdG~-ilv--s~~~~V~~~d~-~G~~~W~~~~~ 74 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEY---PLEKGWECNSVAA--TKAGE-ILF--SYSKGAKMITR-DGRELWNIAAP 74 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEE---ECCTTCCCCEEEE--CTTSC-EEE--ECBSEEEEECT-TSCEEEEEECC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEe---CCCccCCCcCeEE--CCCCC-EEE--eCCCCEEEECC-CCCEEEEEcCC
Confidence 4688999999999999998777655322 2222 34566666 89997 555 35788999999 89999988843
Q ss_pred --CCeeEEEECCCCCEEEEEec-CCcEEEEECCCCceEEEecC------CCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 277 --WPVNHSSQSPDGKLLIIVGD-NPDGLLVDSMTGKTIASLCG------HLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 277 --~~v~~~~~sp~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~------~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
..+.++.+.|+|+.+++.+. ++.|..+|. +|+.+..+.. +......+++.++|+++++.+.++.|..||.
T Consensus 75 ~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~ 153 (276)
T 3no2_A 75 AGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAP 153 (276)
T ss_dssp TTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECT
T ss_pred CCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECC
Confidence 46888999999999999887 788888885 7887777641 2224456778999999999999999999998
Q ss_pred cCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc------cCeEEEEEcCCCCcEEEE
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF------GEISGISFSPDTESLFIG 421 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~------~~v~~~~~spdg~~l~~~ 421 (446)
. ++.+..+... ..+.++.+.++|+.+++++.++.|..+|..+|+.+.++.... ..+.++...++|..+++.
T Consensus 154 -~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 154 -N-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp -T-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEE
T ss_pred -C-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEe
Confidence 4 7778887764 456678889999999998888899999999999888876432 237889999999876654
No 178
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.66 E-value=1.4e-13 Score=129.28 Aligned_cols=218 Identities=7% Similarity=0.002 Sum_probs=157.2
Q ss_pred EEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 192 VSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 192 v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
...+++ .++++++...++.|.+||..+.+..... . .......+.+ ++++ .++++...++.|.+||+.+++..
T Consensus 46 ~~~i~~~~~~lyv~~~~~~~v~viD~~t~~~~~~i---~-~~~~p~~i~~--~~~g-~lyv~~~~~~~v~~iD~~t~~~~ 118 (328)
T 3dsm_A 46 AQSMVIRDGIGWIVVNNSHVIFAIDINTFKEVGRI---T-GFTSPRYIHF--LSDE-KAYVTQIWDYRIFIINPKTYEIT 118 (328)
T ss_dssp EEEEEEETTEEEEEEGGGTEEEEEETTTCCEEEEE---E-CCSSEEEEEE--EETT-EEEEEEBSCSEEEEEETTTTEEE
T ss_pred ceEEEEECCEEEEEEcCCCEEEEEECcccEEEEEc---C-CCCCCcEEEE--eCCC-eEEEEECCCCeEEEEECCCCeEE
Confidence 456666 5566666667899999999887654322 2 2334566665 7787 45555548999999999999988
Q ss_pred EeeeCCC------CeeEEEECCCCCEEEEEe--cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCC---
Q 013282 271 KHFRFPW------PVNHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQD--- 339 (446)
Q Consensus 271 ~~~~~~~------~v~~~~~sp~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d--- 339 (446)
..+.... ....+++ ++..|+++. .++.|.++|+.+++.+..+.... ....++++|+|++++++..+
T Consensus 119 ~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~-~p~~i~~~~dG~l~v~~~~~~~~ 195 (328)
T 3dsm_A 119 GYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI-QPTSLVMDKYNKMWTITDGGYEG 195 (328)
T ss_dssp EEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS-CBCCCEECTTSEEEEEBCCBCTT
T ss_pred EEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC-CccceEEcCCCCEEEEECCCccC
Confidence 8777444 5667777 455555554 48899999999999888876433 34688999999987777655
Q ss_pred -------CcEEEEEccCCCcceEEEecC-CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE-eec-cccCeEEE
Q 013282 340 -------KTCRIWDLRNLSESVAVLKGN-LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EID-FFGEISGI 409 (446)
Q Consensus 340 -------~~v~iwd~~~~~~~~~~~~~~-~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~-~~~-~~~~v~~~ 409 (446)
+.|.++|..+ .+....+... ...+..++|+|++++|+++.. .|.+||+.+++.... +.. ....+.++
T Consensus 196 ~~~~~~~~~v~~id~~t-~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi 272 (328)
T 3dsm_A 196 SPYGYEAPSLYRIDAET-FTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGL 272 (328)
T ss_dssp CSSCBCCCEEEEEETTT-TEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEE
T ss_pred CccccCCceEEEEECCC-CeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEE
Confidence 7899999965 5666565532 236889999999999988765 899999988765321 111 14578999
Q ss_pred EEcCCCCcEEEEE
Q 013282 410 SFSPDTESLFIGV 422 (446)
Q Consensus 410 ~~spdg~~l~~~~ 422 (446)
+++|++..|+++.
T Consensus 273 ~vdp~~g~lyva~ 285 (328)
T 3dsm_A 273 TVNPNNGEVYVAD 285 (328)
T ss_dssp EECTTTCCEEEEE
T ss_pred EEcCCCCeEEEEc
Confidence 9999766777665
No 179
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.66 E-value=4e-14 Score=128.65 Aligned_cols=231 Identities=11% Similarity=0.049 Sum_probs=155.1
Q ss_pred EEEEEe--CCcEEE-EeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV--KDKLLV-AGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~--~~~~l~-tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
..++++ ++++++ +.+.++.|.+|+....... .........+..+.+ +++|. ++++.. ++.|.+|+..+..
T Consensus 26 p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~p~~i~~--~~~g~-l~v~~~-~~~i~~~d~~~~~ 98 (270)
T 1rwi_B 26 PSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTT---VLPFNGLYQPQGLAV--DGAGT-VYVTDF-NNRVVTLAAGSNN 98 (270)
T ss_dssp EEEEEECTTCCEEEEECSSSCEEEEECC-----E---ECCCCSCCSCCCEEE--CTTCC-EEEEET-TTEEEEECTTCSC
T ss_pred ccceEECCCCCEEEEccCCCCcEEEecCCCcccc---eEeeCCcCCcceeEE--CCCCC-EEEEcC-CCEEEEEeCCCce
Confidence 556666 677777 5577889999987544221 111222234566766 88887 555554 8899999987654
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
...... ....+..++++|+|+++++...++.|.+|+..+.............+.+++++|+|+++++...++.|.+||.
T Consensus 99 ~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 178 (270)
T 1rwi_B 99 QTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEA 178 (270)
T ss_dssp CEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECT
T ss_pred EeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEec
Confidence 432221 2356889999999997777777889999987655443332233346788999999997777777889999998
Q ss_pred cCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
.. .........+...+.+++++++|+++++...++.|.+|+............+...+.+++++|+|+.+++...++++
T Consensus 179 ~~-~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v 257 (270)
T 1rwi_B 179 ES-NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRV 257 (270)
T ss_dssp TT-CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEE
T ss_pred CC-CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEE
Confidence 54 33222222333568899999999877777778899999987654333222334578999999999865555556655
Q ss_pred ceE
Q 013282 428 GSL 430 (446)
Q Consensus 428 ~~~ 430 (446)
..+
T Consensus 258 ~~~ 260 (270)
T 1rwi_B 258 VKL 260 (270)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 180
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.65 E-value=7.5e-13 Score=121.39 Aligned_cols=192 Identities=11% Similarity=0.103 Sum_probs=139.2
Q ss_pred eEEEEEe---CCcEEEEecc-CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV---KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.+..+++ +++++++... ++.|.+|+. ..... ......+...+..+.+ +++|. ++++...++.|++|+..
T Consensus 78 ~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~-~g~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~~- 150 (286)
T 1q7f_A 78 YPNRVAVVRNSGDIIVTERSPTHQIQIYNQ-YGQFV--RKFGATILQHPRGVTV--DNKGR-IIVVECKVMRVIIFDQN- 150 (286)
T ss_dssp SEEEEEEETTTTEEEEEECGGGCEEEEECT-TSCEE--EEECTTTCSCEEEEEE--CTTSC-EEEEETTTTEEEEECTT-
T ss_pred CceEEEEEcCCCeEEEEcCCCCCEEEEECC-CCcEE--EEecCccCCCceEEEE--eCCCC-EEEEECCCCEEEEEcCC-
Confidence 3566666 4556666543 889999994 33322 1222233345667766 89986 67777778999999964
Q ss_pred ceeeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCC--CCceeEEEECCCCCEEEEEeCCC-
Q 013282 267 YQLSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH--LDFSFASAWHPNGVTFATGNQDK- 340 (446)
Q Consensus 267 ~~~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~p~~~~l~sgs~d~- 340 (446)
++.+..+. ....+..++++|+|+++++...++.|++||. +++.+..+..+ ...+..++++|+|+++++...++
T Consensus 151 g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~ 229 (286)
T 1q7f_A 151 GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNF 229 (286)
T ss_dssp SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSC
T ss_pred CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCE
Confidence 55555554 2345899999999997787778899999997 46666666543 36788999999999888888776
Q ss_pred cEEEEEccCCCcceEEEecCCC--ceEEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 013282 341 TCRIWDLRNLSESVAVLKGNLG--AIRSIRYTSDGRYMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 341 ~v~iwd~~~~~~~~~~~~~~~~--~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~ 393 (446)
.|.+||. . ++.+..+..+.. .+.+++++|+|+++++ +.++.|++|++...
T Consensus 230 ~i~~~~~-~-g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 230 NLTIFTQ-D-GQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEECT-T-SCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEEEECC-C-CCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 9999996 3 566666665433 4779999999986666 67999999997653
No 181
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=3.7e-14 Score=134.93 Aligned_cols=209 Identities=12% Similarity=0.024 Sum_probs=138.5
Q ss_pred cCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEe----------CCCcEEEEecCcceeeEeeeC-
Q 013282 207 FQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN----------NDCGVRDFDMGKYQLSKHFRF- 275 (446)
Q Consensus 207 ~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~~~~- 275 (446)
.++.|.+||..+..... .......+ .+.+ +|+|+. +++++ .++.|.+||+.+++.+..+..
T Consensus 29 ~d~~v~v~D~~t~~~~~---~i~~g~~p--~i~~--spdg~~-lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~ 100 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLG---MVPTAFNG--HVQV--SNDGKK-IYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLP 100 (361)
T ss_dssp GGCEEEEEETTTCCEEE---EEECCEEE--EEEE--CTTSSE-EEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEEC
T ss_pred ccCeEEEEECCCCeEEE---EecCCCCC--ceEE--CCCCCE-EEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcC
Confidence 47899999987776442 22233222 4544 999985 55553 367899999999988887762
Q ss_pred ------CCCeeEEEECCCCCEEEEEec--CCcEEEEECCCCceEEE-ecCCCCceeEEEECCCC-CEEEEEeCCCcEEEE
Q 013282 276 ------PWPVNHSSQSPDGKLLIIVGD--NPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNG-VTFATGNQDKTCRIW 345 (446)
Q Consensus 276 ------~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~-~~l~sgs~d~~v~iw 345 (446)
......++++|+|++|+++.. ++.|.+||+.+++.+.. +.. .+ ...+.+.|++ ..+++.+.||++.+|
T Consensus 101 ~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~~-~~~v~~~p~~~~~~~~~~~dg~~~~v 178 (361)
T 2oiz_A 101 PKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAA-AG-CWSVIPQPNRPRSFMTICGDGGLLTI 178 (361)
T ss_dssp TTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGG-TT-EEEEEECTTSSSEEEEEETTSSEEEE
T ss_pred ccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecC-CC-cceeEEcCCCCeeEEEECCCCcEEEE
Confidence 235678999999999988864 57899999999988877 542 11 1223344433 344445555555555
Q ss_pred EccCCCcce-------------------------------------------------EEEecC----------CCceEE
Q 013282 346 DLRNLSESV-------------------------------------------------AVLKGN----------LGAIRS 366 (446)
Q Consensus 346 d~~~~~~~~-------------------------------------------------~~~~~~----------~~~v~~ 366 (446)
++...++.. ..+... ......
T Consensus 179 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~ 258 (361)
T 2oiz_A 179 NLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNL 258 (361)
T ss_dssp EECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSC
T ss_pred EECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeE
Confidence 442211111 011000 001112
Q ss_pred EEEccCCCEEEEEeC-----------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcc
Q 013282 367 IRYTSDGRYMATAEP-----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 367 l~~s~dg~~l~~~~~-----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
++|+|+++.++++.. .+.|.+||+.+++.+..+..+. +.+++|+|+|++|++++. +++.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~ 328 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVN 328 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEE
Confidence 789999888777643 3489999999999888887766 999999999999998775 5443
No 182
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.63 E-value=6.6e-13 Score=137.95 Aligned_cols=224 Identities=11% Similarity=0.008 Sum_probs=157.3
Q ss_pred eEEEEEe--CCcEEEEeccCC-----cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCc-----
Q 013282 191 QVSTLAV--KDKLLVAGGFQG-----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCG----- 258 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg-----~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~----- 258 (446)
.+..++| +|++||.+..++ .|++|++.++..... ..... .+..+.| +|+|+. |+.++.++.
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~--~~~~~--~~~~~~w--spDg~~-l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD--VLERV--KFSCMAW--THDGKG-MFYNAYPQQDGKSD 198 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE--EEEEE--CSCCEEE--CTTSSE-EEEEECCCCSSCCS
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc--cccCc--ccceEEE--EeCCCE-EEEEEECCcccccc
Confidence 3566666 999998876544 899999987754321 11111 1344554 999985 555555554
Q ss_pred -----------EEEEecCcceee--Eeee---CCCCeeEEEECCCCCEEEEEec-----CCcEEEEECCC------Cc-e
Q 013282 259 -----------VRDFDMGKYQLS--KHFR---FPWPVNHSSQSPDGKLLIIVGD-----NPDGLLVDSMT------GK-T 310 (446)
Q Consensus 259 -----------v~iwd~~~~~~~--~~~~---~~~~v~~~~~sp~~~~l~~~~~-----d~~i~i~d~~~------~~-~ 310 (446)
|++|++.+++.. ..+. ++..+..+.|+|||++|+.++. +..|++||+.+ +. .
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~ 278 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILK 278 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCC
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccc
Confidence 999999876522 2222 3445789999999999988764 56899999986 53 4
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEEeCC----CcEEEEEccCCCc-ceEEEecCCC--ceEEEEEccCCCEEEEEeCCC
Q 013282 311 IASLCGHLDFSFASAWHPNGVTFATGNQD----KTCRIWDLRNLSE-SVAVLKGNLG--AIRSIRYTSDGRYMATAEPAD 383 (446)
Q Consensus 311 ~~~~~~~~~~v~~~~~~p~~~~l~sgs~d----~~v~iwd~~~~~~-~~~~~~~~~~--~v~~l~~s~dg~~l~~~~~dg 383 (446)
...+..+...+.. .|+|+|..|+..+.. +.|.+||+..... ....+..|.. .+..++|++++.+++++..++
T Consensus 279 ~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g 357 (710)
T 2xdw_A 279 WVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDV 357 (710)
T ss_dssp CEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETT
T ss_pred eEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECC
Confidence 5666666666654 588999888776653 3699999965321 3455655544 688899998888888888888
Q ss_pred e--EEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 384 F--VHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 384 ~--i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
. |++|++.+++.+..+..+.+.+.+++++|++..|+...
T Consensus 358 ~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ 398 (710)
T 2xdw_A 358 KNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQF 398 (710)
T ss_dssp EEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEE
T ss_pred EEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEE
Confidence 4 66778877876677766777889999999998776553
No 183
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.63 E-value=1.8e-13 Score=128.45 Aligned_cols=218 Identities=12% Similarity=0.111 Sum_probs=154.0
Q ss_pred CeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe
Q 013282 151 FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT 228 (446)
Q Consensus 151 ~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~ 228 (446)
+.|.+|+..+++...... .++.. ....+++ +|+++++...++.|++|+........ ..+.
T Consensus 69 ~~i~~~d~~~g~~~~~~~-~~~~~----------------~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~-~~~~ 130 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSG-KNLFY----------------LPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPL-LILG 130 (329)
T ss_dssp CCEEEECTTTCCEEEEEC-TTTCS----------------SEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCS-EEES
T ss_pred CcEEEEECCCCeEEeccC-CCccC----------------CceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEE-EEec
Confidence 468889887775432221 11111 3556666 78899999999999999985442111 1111
Q ss_pred --------ecCCCceeeEEEEeCC-CCCeEEEEEe-CCCcEEEEecCcceeeEeee-CC----------CCeeEEEECCC
Q 013282 229 --------YDDNAITNAVEIYGSP-SGAVHFTASN-NDCGVRDFDMGKYQLSKHFR-FP----------WPVNHSSQSPD 287 (446)
Q Consensus 229 --------~~~~~~v~~i~~~~s~-~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~-~~----------~~v~~~~~sp~ 287 (446)
..+......+++ +| ++. ++++.+ .++.|++|+ .+++.+..+. .. .....++++|+
T Consensus 131 ~~~~~g~~~~~~~~P~~ia~--~~~~g~-lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~ 206 (329)
T 3fvz_A 131 RSMQPGSDQNHFCQPTDVAV--EPSTGA-VFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPH 206 (329)
T ss_dssp BTTBCCCSTTCCSSEEEEEE--CTTTCC-EEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETT
T ss_pred ccCCCCCCccccCCCcEEEE--eCCCCe-EEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECC
Confidence 122334566766 88 555 677775 689999999 5666666664 11 23789999998
Q ss_pred -CCEEEEEecCCcEEEEECCCCceEEEec--CCCCceeEEEECCCCCEEEE-------EeCCCcEEEEEccCCCcceEEE
Q 013282 288 -GKLLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFAT-------GNQDKTCRIWDLRNLSESVAVL 357 (446)
Q Consensus 288 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~s-------gs~d~~v~iwd~~~~~~~~~~~ 357 (446)
+.++++...++.|++|+..+++.+..+. .+...+.+++|+| +..+++ ...+.+|++||+.+ ++.+..+
T Consensus 207 ~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-g~~~~~~ 284 (329)
T 3fvz_A 207 LDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-GEIIDVF 284 (329)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT-CCEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC-CeEEEEE
Confidence 6666777788999999999899888884 4567788999999 433333 33455899999965 7777776
Q ss_pred e---cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 013282 358 K---GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 358 ~---~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
. ++...+..|+++|+|.++++...++.|++|++..
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 3 5666789999999998888888899999999753
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.60 E-value=2.2e-13 Score=141.53 Aligned_cols=192 Identities=8% Similarity=-0.072 Sum_probs=138.9
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCCC----cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCCc----------
Q 013282 234 ITNAVEIYGSPSGAVHFTASNNDC----GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPD---------- 299 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~dg----~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~---------- 299 (446)
.+..+.+ ||+|+.++++.+..| .|++||+.+++.+........+..++|+|||+.|+.++.++.
T Consensus 126 ~~~~~~~--SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 126 ALRGYAF--SEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEE--CTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEE--CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 3455555 999996555555444 899999999988764333333778999999999999887765
Q ss_pred ------EEEEECCCCce--EEEec--CCCCceeEEEECCCCCEEEEEeC-----CCcEEEEEccC------CCcceEEEe
Q 013282 300 ------GLLVDSMTGKT--IASLC--GHLDFSFASAWHPNGVTFATGNQ-----DKTCRIWDLRN------LSESVAVLK 358 (446)
Q Consensus 300 ------i~i~d~~~~~~--~~~~~--~~~~~v~~~~~~p~~~~l~sgs~-----d~~v~iwd~~~------~~~~~~~~~ 358 (446)
|++|++.+++. ...+. .|...+..++|+|+|++|+.++. +..|.+||+.. .......+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 99999988762 22223 35566889999999999988775 56899999964 222466777
Q ss_pred cCCCceEEEEEccCCCEEEEEeCC----CeEEEEEcCCCe--eEeEeecccc--CeEEEEEcCCCCcEEEEEecCCcc
Q 013282 359 GNLGAIRSIRYTSDGRYMATAEPA----DFVHVYDVKSGY--EKEQEIDFFG--EISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 359 ~~~~~v~~l~~s~dg~~l~~~~~d----g~i~iwd~~~~~--~~~~~~~~~~--~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
.+...+.. .|+|+|+.|+..+.. +.|.+||+.++. ....+..+.. .+.+++|++++.+++++..|+...
T Consensus 284 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~ 360 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNT 360 (710)
T ss_dssp CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEE
T ss_pred CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEE
Confidence 77666655 589999988776653 369999998874 2345555544 588899998777777777776543
No 185
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.60 E-value=2.7e-12 Score=118.35 Aligned_cols=216 Identities=11% Similarity=0.025 Sum_probs=147.2
Q ss_pred cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEE
Q 013282 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR 226 (446)
Q Consensus 149 ~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~ 226 (446)
.++.|..|+..++ ...+.... ..+.++++ +|+++++...++.|.+|+..++.......
T Consensus 48 ~~~~i~~~~~~~~--~~~~~~~~------------------~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~ 107 (296)
T 3e5z_A 48 RQNRTWAWSDDGQ--LSPEMHPS------------------HHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIAD 107 (296)
T ss_dssp GGTEEEEEETTSC--EEEEESSC------------------SSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEEC
T ss_pred CCCEEEEEECCCC--eEEEECCC------------------CCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEee
Confidence 3567888887766 22222211 14677777 78888777777899999986665332111
Q ss_pred Eeec-CCCceeeEEEEeCCCCCeEEEE----Ee-------------CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCC
Q 013282 227 TTYD-DNAITNAVEIYGSPSGAVHFTA----SN-------------NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDG 288 (446)
Q Consensus 227 ~~~~-~~~~v~~i~~~~s~~~~~~l~s----~s-------------~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 288 (446)
.... ....++.+.+ +|+|. ++++ |+ ..+.|..++.. ++...........+.++|+|++
T Consensus 108 ~~~~~~~~~~~~i~~--d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 108 SFEGKKLNSPNDVCL--APDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp EETTEECCCCCCEEE--CTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTS
T ss_pred ccCCCCCCCCCCEEE--CCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCC
Confidence 1111 1123455666 89997 5665 22 13456666665 5544444455667899999999
Q ss_pred CEEEEEecCCcEEEEECC-CCce---EEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCce
Q 013282 289 KLLIIVGDNPDGLLVDSM-TGKT---IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAI 364 (446)
Q Consensus 289 ~~l~~~~~d~~i~i~d~~-~~~~---~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v 364 (446)
+.+++.+.++.|++|++. +++. ...+..+...+..++++++|+++++. ++.|.+||.. ++.+..+..+.. +
T Consensus 184 ~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~--g~~~~~~~~~~~-~ 258 (296)
T 3e5z_A 184 NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD--GDELGRVLTPQT-T 258 (296)
T ss_dssp CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT--SCEEEEEECSSC-C
T ss_pred CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC--CCEEEEEECCCC-c
Confidence 998777778899999987 5554 33343355667789999999877666 7889999984 677777877777 8
Q ss_pred EEEEE-ccCCCEEEEEeCCCeEEEEEcCCCe
Q 013282 365 RSIRY-TSDGRYMATAEPADFVHVYDVKSGY 394 (446)
Q Consensus 365 ~~l~~-s~dg~~l~~~~~dg~i~iwd~~~~~ 394 (446)
++++| +|+++.|++++.++ +..+++.+..
T Consensus 259 ~~~~f~~~d~~~L~v~t~~~-l~~~~~~~~~ 288 (296)
T 3e5z_A 259 SNLCFGGPEGRTLYMTVSTE-FWSIETNVRG 288 (296)
T ss_dssp CEEEEESTTSCEEEEEETTE-EEEEECSCCB
T ss_pred eeEEEECCCCCEEEEEcCCe-EEEEEccccc
Confidence 99999 68999999888765 6666776654
No 186
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.59 E-value=3.9e-12 Score=127.52 Aligned_cols=250 Identities=14% Similarity=0.107 Sum_probs=170.9
Q ss_pred cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEE--EeCCcEEEEeccCCcEEEEEcC--CCCeeeE
Q 013282 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTL--AVKDKLLVAGGFQGELICKHLD--RPGVSFC 224 (446)
Q Consensus 149 ~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l--~~~~~~l~tg~~dg~i~vw~~~--~~~~~~~ 224 (446)
.++.|.++|..+++....+... . .+..+ +.++++|++++.+|.|.+||+. +.....
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g-~------------------~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~- 234 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTG-Y------------------AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA- 234 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECS-S------------------CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE-
T ss_pred CCCeEEEEECCCCeEEEEEeCC-C------------------CccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE-
Confidence 3678999999888655444322 1 13344 4499999999999999999996 444332
Q ss_pred EEEeecCCCceeeEEEEeC----CCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC-----------C------------
Q 013282 225 SRTTYDDNAITNAVEIYGS----PSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP-----------W------------ 277 (446)
Q Consensus 225 ~~~~~~~~~~v~~i~~~~s----~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~-----------~------------ 277 (446)
.+. .. .....+.+ + |+|+.++++...+++|.++|..+.+++..+... .
T Consensus 235 -~i~-~G-~~P~~ia~--s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~ 309 (567)
T 1qks_A 235 -EIK-IG-SEARSIET--SKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYR 309 (567)
T ss_dssp -EEE-CC-SEEEEEEE--CCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSS
T ss_pred -EEe-cC-CCCceeEE--ccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCC
Confidence 222 22 22345555 8 699977777778899999999887776654310 0
Q ss_pred ---------------------------------CeeEEEECCCCCEEEEEe-cCCcEEEEECCCCceEEEecC-----CC
Q 013282 278 ---------------------------------PVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG-----HL 318 (446)
Q Consensus 278 ---------------------------------~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~-----~~ 318 (446)
....+.|+|++++++++. .++.|.++|+.+++.+..+.. |.
T Consensus 310 ~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 310 PEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp SEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred CEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 122567999999887665 578999999999998776653 33
Q ss_pred CceeEEEECCC-CCEEEEEe-CCCcEEEEEccCC------CcceEEEecCCCceEEEEEccCCCEEEEEeC-------CC
Q 013282 319 DFSFASAWHPN-GVTFATGN-QDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAEP-------AD 383 (446)
Q Consensus 319 ~~v~~~~~~p~-~~~l~sgs-~d~~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~-------dg 383 (446)
+....+ ++|+ +..++++. .+++|.++|.... .+.++++......-..++.+|++++|.+... .+
T Consensus 390 g~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~ 468 (567)
T 1qks_A 390 GRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISG 468 (567)
T ss_dssp TTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHT
T ss_pred ccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCc
Confidence 222222 5887 45555554 3689999998641 3566777765444346889999999998763 35
Q ss_pred eEEEEEcCCC-----eeE-eEee--------ccccCeEEEEEcCCCCcEEEEEec
Q 013282 384 FVHVYDVKSG-----YEK-EQEI--------DFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 384 ~i~iwd~~~~-----~~~-~~~~--------~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
.|.++|+.+. ... ..+. .....+..+.|+|+|+.++++.|.
T Consensus 469 ~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~ 523 (567)
T 1qks_A 469 SVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWN 523 (567)
T ss_dssp CEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEEC
T ss_pred eEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeec
Confidence 8999999876 222 2221 123468899999999999999874
No 187
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.59 E-value=2.3e-14 Score=137.53 Aligned_cols=217 Identities=13% Similarity=0.004 Sum_probs=144.2
Q ss_pred EEeCCcEEEEeccC---CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeE
Q 013282 195 LAVKDKLLVAGGFQ---GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSK 271 (446)
Q Consensus 195 l~~~~~~l~tg~~d---g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~ 271 (446)
++++|++|+..... ..|.+|++.+... ..+..++......+.| +|+|+ .|+.++.++.|++|++.+++...
T Consensus 43 ~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~---~~l~~~~~~~~~~~~~--spdg~-~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 43 FTQDGKKLLFAGDFDGNRNYYLLNLETQQA---VQLTEGKGDNTFGGFI--STDER-AFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp BCTTSCEEEEEECTTSSCEEEEEETTTTEE---EECCCSSCBCTTTCEE--CTTSS-EEEEEETTTEEEEEETTTCCEEE
T ss_pred CCCCCCEEEEEEecCCCceEEEEECCCCcE---EEeecCCCCccccceE--CCCCC-EEEEEEcCCcEEEEECCCCCcEE
Confidence 34488888776543 3677888866532 2333333222222444 99998 47677788899999999887766
Q ss_pred eee-CCCCeeE-------------------EEECCCCCEEEEE-----ecCCcEEEEECCCCceEEEecCCCCceeEEEE
Q 013282 272 HFR-FPWPVNH-------------------SSQSPDGKLLIIV-----GDNPDGLLVDSMTGKTIASLCGHLDFSFASAW 326 (446)
Q Consensus 272 ~~~-~~~~v~~-------------------~~~sp~~~~l~~~-----~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 326 (446)
... +...... +.|+|+++.++.+ ..+..|++||+.+++..... .+...+..++|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 555 2222222 3567888876654 35668999999988765544 46678899999
Q ss_pred CC-CCCEEEEEeCC------CcEEEEEccCCCcceEEEecC--CCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCC
Q 013282 327 HP-NGVTFATGNQD------KTCRIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKS 392 (446)
Q Consensus 327 ~p-~~~~l~sgs~d------~~v~iwd~~~~~~~~~~~~~~--~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~ 392 (446)
+| ++..|+..+.+ ..|.+||+.. +. ...+..+ ...+..++|+|+|++|+.++.+ +.|++||+.+
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDG-SN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPET 273 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTS-CC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTT
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCC-Cc-eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCC
Confidence 99 88877776653 3588888843 32 3333333 2357889999999988777544 4499999988
Q ss_pred CeeEeEeeccccCeEEEEEcC-CCCcEEEEEe
Q 013282 393 GYEKEQEIDFFGEISGISFSP-DTESLFIGVW 423 (446)
Q Consensus 393 ~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~ 423 (446)
+.... +....+ .. +.|+| +|++|++++.
T Consensus 274 g~~~~-l~~~~~-~~-~~~s~~dg~~l~~~~~ 302 (396)
T 3c5m_A 274 LENEE-VMVMPP-CS-HLMSNFDGSLMVGDGC 302 (396)
T ss_dssp CCEEE-EEECCS-EE-EEEECSSSSEEEEEEC
T ss_pred CCeEE-eeeCCC-CC-CCccCCCCceEEEecC
Confidence 86433 222222 33 89999 9998887653
No 188
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=2.8e-12 Score=120.24 Aligned_cols=240 Identities=8% Similarity=-0.024 Sum_probs=161.4
Q ss_pred CeEEEec--CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcEEEEEcCC
Q 013282 143 HDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGELICKHLDR 218 (446)
Q Consensus 143 ~~v~~~~--~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i~vw~~~~ 218 (446)
..+|... ++.|.+||..+++....+... . ....+++ ++..+++...++.|.+||+.+
T Consensus 54 ~~lyv~~~~~~~v~viD~~t~~~~~~i~~~--~-----------------~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t 114 (328)
T 3dsm_A 54 GIGWIVVNNSHVIFAIDINTFKEVGRITGF--T-----------------SPRYIHFLSDEKAYVTQIWDYRIFIINPKT 114 (328)
T ss_dssp TEEEEEEGGGTEEEEEETTTCCEEEEEECC--S-----------------SEEEEEEEETTEEEEEEBSCSEEEEEETTT
T ss_pred CEEEEEEcCCCEEEEEECcccEEEEEcCCC--C-----------------CCcEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 3444433 578999999888664444211 0 2445555 665555554889999999987
Q ss_pred CCeeeEEEEeecC----CCceeeEEEEeCCCCCeEEEEEe-CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEE
Q 013282 219 PGVSFCSRTTYDD----NAITNAVEIYGSPSGAVHFTASN-NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLII 293 (446)
Q Consensus 219 ~~~~~~~~~~~~~----~~~v~~i~~~~s~~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 293 (446)
...... +..+. ......+.+ ++..++++.. .++.|.++|+.+++.+..+........++++|+|+++++
T Consensus 115 ~~~~~~--i~~g~~~~~~~~p~~i~~----~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 115 YEITGY--IECPDMDMESGSTEQMVQ----YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTI 188 (328)
T ss_dssp TEEEEE--EECTTCCTTTCBCCCEEE----ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEE
T ss_pred CeEEEE--EEcCCccccCCCcceEEE----ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEE
Confidence 654321 11111 013445554 3444555544 488999999999999888886566788999999997776
Q ss_pred EecC----------CcEEEEECCCCceEEEecCC-CCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceE--EEecC
Q 013282 294 VGDN----------PDGLLVDSMTGKTIASLCGH-LDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA--VLKGN 360 (446)
Q Consensus 294 ~~~d----------~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~--~~~~~ 360 (446)
+..+ +.|.++|..+++....+... ......++|+|+++.|+++.. .|.+||+.. ++... .+...
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t-~~~~~~~~~~~~ 265 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEA-DRVPVRPFLEFR 265 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTC-SSCCSSCSBCCC
T ss_pred ECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCC-CceeeeeeecCC
Confidence 6554 78999999999887776532 236789999999999888765 899999965 33321 12222
Q ss_pred CCceEEEEEcc-CCCEEEEE----eCCCeEEEEEcCCCeeEeEeeccccCeEEEEEc
Q 013282 361 LGAIRSIRYTS-DGRYMATA----EPADFVHVYDVKSGYEKEQEIDFFGEISGISFS 412 (446)
Q Consensus 361 ~~~v~~l~~s~-dg~~l~~~----~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 412 (446)
......++++| +++++++. ..++.|.+||.. ++.+..+.. ......++|-
T Consensus 266 ~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~-G~~P~~~~~~ 320 (328)
T 3dsm_A 266 DTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV-GIIPGAFCWK 320 (328)
T ss_dssp SSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE-EESEEEEEEE
T ss_pred CCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe-ccCcceEEEe
Confidence 35688999999 45555555 568899999988 877766652 3345566663
No 189
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=7.4e-13 Score=124.20 Aligned_cols=225 Identities=10% Similarity=0.022 Sum_probs=151.5
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
|.++++ ++..++..+.++.++.|. .. .......+...+..+.+ +++|. +++++..++.|++||..+++.
T Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~--~~~g~-l~~~~~~~~~i~~~d~~~~~~ 78 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIISESELQTIT---AE---PWLEISKKGLQLEGLNF--DRQGQ-LFLLDVFEGNIFKINPETKEI 78 (333)
T ss_dssp CCBCCSCGGGGCSSCCCCGGGSCEEE---CE---EEEEEESSCCCEEEEEE--CTTSC-EEEEETTTCEEEEECTTTCCE
T ss_pred cceeeecCCccceeEEeecccCcccc---cc---eeEEEeccCccccCcEE--CCCCC-EEEEECCCCEEEEEeCCCCcE
Confidence 445555 445566667788888882 11 12333344455566666 89987 677788889999999988877
Q ss_pred eEee-eCCCCeeEEEECCCCCEEEEEecC----CcEEEEECCCCceEEEec--CCCCceeEEEECCCCCEEEEEeC----
Q 013282 270 SKHF-RFPWPVNHSSQSPDGKLLIIVGDN----PDGLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFATGNQ---- 338 (446)
Q Consensus 270 ~~~~-~~~~~v~~~~~sp~~~~l~~~~~d----~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~sgs~---- 338 (446)
.... .+...+.+++++|+|+++++...+ +.|.+||..+++....+. .+...+..++++|+|+++++...
T Consensus 79 ~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 79 KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecccccc
Confidence 6655 356779999999999987777666 689999998877654443 24457899999999988877654
Q ss_pred --CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEE-eCCCeEEEEEcCC-CeeEeE-----eeccc--cCeE
Q 013282 339 --DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKS-GYEKEQ-----EIDFF--GEIS 407 (446)
Q Consensus 339 --d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~-~~dg~i~iwd~~~-~~~~~~-----~~~~~--~~v~ 407 (446)
.+.|..+|.. ...+..+......+..++|+|+|++|+.+ +.++.|.+|++.+ +..... ..... ..+.
T Consensus 159 ~~~~~l~~~~~~--~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~ 236 (333)
T 2dg1_A 159 NPLGGVYYVSPD--FRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPD 236 (333)
T ss_dssp BCCEEEEEECTT--SCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEE
T ss_pred CCCceEEEEeCC--CCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCC
Confidence 2445555543 22333333334457899999999866554 4578999999964 322211 11111 3678
Q ss_pred EEEEcCCCCcEEEEEecCCc
Q 013282 408 GISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 408 ~~~~spdg~~l~~~~~D~~~ 427 (446)
+++++++|+++++...++.+
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v 256 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRV 256 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEE
T ss_pred ceEECCCCCEEEEEcCCCEE
Confidence 89999999866655444433
No 190
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.57 E-value=6e-11 Score=108.88 Aligned_cols=219 Identities=9% Similarity=-0.040 Sum_probs=151.1
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.+.++++ ++.++++...++.|..|+.. .... ..........+..+.+ .++|. ++++...++.|.+||. +++
T Consensus 58 ~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~d~-~g~ 130 (299)
T 2z2n_A 58 KVMCLTISSDGEVWFTENAANKIGRITKK-GIIK--EYTLPNPDSAPYGITE--GPNGD-IWFTEMNGNRIGRITD-DGK 130 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEECSSTTCCEEEEEE--CTTSC-EEEEETTTTEEEEECT-TCC
T ss_pred ceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEE--EEeCCCcCCCceeeEE--CCCCC-EEEEecCCceEEEECC-CCC
Confidence 4777777 67777777778889999875 2221 1112223345566666 88886 5666667889999998 555
Q ss_pred eeEeee--CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE-ecCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 269 LSKHFR--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
...... ....+..+++.|+|++.++...++.|..||. +++.... +......+.+++++|+|+++++...++.|.+|
T Consensus 131 ~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~ 209 (299)
T 2z2n_A 131 IREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRI 209 (299)
T ss_dssp EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEE
Confidence 433221 3456899999999987777777789999998 6765443 33345568899999999977777678899999
Q ss_pred EccCCCcceE-EEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE-eeccccCeEEEEEcCCCCcEEEE
Q 013282 346 DLRNLSESVA-VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EIDFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 346 d~~~~~~~~~-~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~ 421 (446)
|. . +.... .+..+...+.+++++++|+++++...++.|.+||. ++..... ...+...+.++++ ++|.+.++.
T Consensus 210 ~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~-~~g~l~v~~ 283 (299)
T 2z2n_A 210 TT-S-GEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF-DGETIWFAM 283 (299)
T ss_dssp CT-T-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE-CSSCEEEEE
T ss_pred CC-C-CcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe-cCCCEEEEe
Confidence 98 4 33222 22334467889999999996666557788999998 4542221 2234467899999 887755543
No 191
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.55 E-value=1.9e-13 Score=129.58 Aligned_cols=171 Identities=12% Similarity=0.014 Sum_probs=132.7
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce-----------eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEE
Q 013282 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ-----------LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLL 302 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~-----------~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 302 (446)
.++.+++ ++... ++++|+.+ .+++|++...+ .......+. |..++| +++.|+++ .++.|++
T Consensus 39 ~~nlLai--s~~~g-ll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDI--SNSKS-LFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEE--ETTTT-EEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEE
T ss_pred cccEEEE--cCCCC-EEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEE
Confidence 5788888 77777 67888777 46669875433 223445667 999999 99999998 8899999
Q ss_pred EECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCC
Q 013282 303 VDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA 382 (446)
Q Consensus 303 ~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d 382 (446)
||+++......+..|...+.++.+.+. .+++++.||+|.+||+.. +.... +...|++++|||+| ++.|..|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~-~~~~~----~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT-KSTKQ----LAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT-CCEEE----EEESEEEEEECSSE--EEEEETT
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC-Ccccc----ccCCceEEEEcCCc--eEEEEcC
Confidence 999877666666677788888877664 388899999999999965 33332 34579999999999 6789999
Q ss_pred CeEEEEEcCCCee--EeEe------e---ccccCeEEEEEcCCCCcEEEE
Q 013282 383 DFVHVYDVKSGYE--KEQE------I---DFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 383 g~i~iwd~~~~~~--~~~~------~---~~~~~v~~~~~spdg~~l~~~ 421 (446)
|.+++|+...+.. ...+ . +|...|.+|.|.+++.+|++-
T Consensus 182 g~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 182 RSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp SCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred CcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 9999999887764 4444 1 367789999999999888754
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.55 E-value=6.9e-12 Score=115.84 Aligned_cols=217 Identities=11% Similarity=0.076 Sum_probs=150.1
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC--
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-- 275 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-- 275 (446)
++.++++....+.|..|+..+.... .. .....+.++.+ +++|. ++++ . +..|.+||..+++.......
T Consensus 24 ~~~l~~~d~~~~~i~~~d~~~~~~~----~~-~~~~~~~~i~~--~~dG~-l~v~-~-~~~l~~~d~~~g~~~~~~~~~~ 93 (297)
T 3g4e_A 24 SNSLLFVDIPAKKVCRWDSFTKQVQ----RV-TMDAPVSSVAL--RQSGG-YVAT-I-GTKFCALNWKEQSAVVLATVDN 93 (297)
T ss_dssp TTEEEEEETTTTEEEEEETTTCCEE----EE-ECSSCEEEEEE--BTTSS-EEEE-E-TTEEEEEETTTTEEEEEEECCT
T ss_pred CCEEEEEECCCCEEEEEECCCCcEE----EE-eCCCceEEEEE--CCCCC-EEEE-E-CCeEEEEECCCCcEEEEEecCC
Confidence 4567778888899999998765432 11 22345677766 89997 4444 3 56899999988776544332
Q ss_pred ---CCCeeEEEECCCCCEEEEEecC---------CcEEEEECC-CCceEEEecCCCCceeEEEECCCCCEEE-EEeCCCc
Q 013282 276 ---PWPVNHSSQSPDGKLLIIVGDN---------PDGLLVDSM-TGKTIASLCGHLDFSFASAWHPNGVTFA-TGNQDKT 341 (446)
Q Consensus 276 ---~~~v~~~~~sp~~~~l~~~~~d---------~~i~i~d~~-~~~~~~~~~~~~~~v~~~~~~p~~~~l~-sgs~d~~ 341 (446)
...++.++++|+|++.++.... ....||.+. .++.. .+..+......++|+|+++.|+ +.+.++.
T Consensus 94 ~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~-~~~~~~~~pngi~~spdg~~lyv~~~~~~~ 172 (297)
T 3g4e_A 94 DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVK-KYFDQVDISNGLDWSLDHKIFYYIDSLSYS 172 (297)
T ss_dssp TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEE-EEEEEESBEEEEEECTTSCEEEEEEGGGTE
T ss_pred CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEE-EEeeccccccceEEcCCCCEEEEecCCCCc
Confidence 1247889999999966654321 223444443 24333 2333445568899999998765 4555789
Q ss_pred EEEEEcc-CCCcc-----eEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEc-CC
Q 013282 342 CRIWDLR-NLSES-----VAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS-PD 414 (446)
Q Consensus 342 v~iwd~~-~~~~~-----~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s-pd 414 (446)
|.+|++. ..+.. ...+..+.+.+..++++++|++.++....+.|.+||..+++.+..+..+...+++++|. |+
T Consensus 173 i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d 252 (297)
T 3g4e_A 173 VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKN 252 (297)
T ss_dssp EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGG
T ss_pred EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCC
Confidence 9999974 22322 22223334567899999999988877778899999999898887777666789999998 89
Q ss_pred CCcEEEEEecC
Q 013282 415 TESLFIGVWDR 425 (446)
Q Consensus 415 g~~l~~~~~D~ 425 (446)
++.|++++...
T Consensus 253 ~~~L~vt~~~~ 263 (297)
T 3g4e_A 253 YSEMYVTCARD 263 (297)
T ss_dssp GCEEEEEEBCT
T ss_pred CCEEEEEcCCc
Confidence 99998887643
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.54 E-value=4.7e-12 Score=117.44 Aligned_cols=226 Identities=13% Similarity=0.169 Sum_probs=152.6
Q ss_pred EEEEEe--CCcEEEE-------eccCCcEEEEEcCCCCeeeEEE-EeecCCCceeeEEEEeCCC-CCeEEEEEeCCCcEE
Q 013282 192 VSTLAV--KDKLLVA-------GGFQGELICKHLDRPGVSFCSR-TTYDDNAITNAVEIYGSPS-GAVHFTASNNDCGVR 260 (446)
Q Consensus 192 v~~l~~--~~~~l~t-------g~~dg~i~vw~~~~~~~~~~~~-~~~~~~~~v~~i~~~~s~~-~~~~l~s~s~dg~v~ 260 (446)
..++++ +++++++ +..++.|.+|+..+........ ...++...+..+.+ +++ |. ++++. ....|.
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~--~~~~g~-l~v~~-~~~~l~ 95 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQC--DRDANQ-LFVAD-MRLGLL 95 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEE--CSSSSE-EEEEE-TTTEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEE--ecCCCc-EEEEE-CCCCEE
Confidence 445666 6777777 6778999999987665321110 00012234555655 888 54 34444 445799
Q ss_pred EEecCcceeeEe-eeC-----CCCeeEEEECCCCCEEEEEecC---------------CcEEEEECCCCceEEEecCCCC
Q 013282 261 DFDMGKYQLSKH-FRF-----PWPVNHSSQSPDGKLLIIVGDN---------------PDGLLVDSMTGKTIASLCGHLD 319 (446)
Q Consensus 261 iwd~~~~~~~~~-~~~-----~~~v~~~~~sp~~~~l~~~~~d---------------~~i~i~d~~~~~~~~~~~~~~~ 319 (446)
+||.. ++.... ... ...+.+++++|+|++.++...+ +.|..++.. ++..... .+..
T Consensus 96 ~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~ 172 (314)
T 1pjx_A 96 VVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQ 172 (314)
T ss_dssp EEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEES
T ss_pred EEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEec-cCCC
Confidence 99998 665443 221 2347899999999877776554 567888766 5544332 3344
Q ss_pred ceeEEEEC----CCCCEEEEE-eCCCcEEEEEccCCCc-----ceEEEecCC-CceEEEEEccCCCEEEEEeCCCeEEEE
Q 013282 320 FSFASAWH----PNGVTFATG-NQDKTCRIWDLRNLSE-----SVAVLKGNL-GAIRSIRYTSDGRYMATAEPADFVHVY 388 (446)
Q Consensus 320 ~v~~~~~~----p~~~~l~sg-s~d~~v~iwd~~~~~~-----~~~~~~~~~-~~v~~l~~s~dg~~l~~~~~dg~i~iw 388 (446)
....++|+ |+++.|+.+ ..++.|.+||+...+. ....+..+. ..+..++++++|+++++...++.|.+|
T Consensus 173 ~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 173 FPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVF 252 (314)
T ss_dssp SEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEE
T ss_pred CcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEE
Confidence 56889999 999765554 5678999999852232 222333333 568899999999988887788899999
Q ss_pred EcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEec
Q 013282 389 DVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 389 d~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
|..+++....+..+...+.+++|+|+|+.|+++..+
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 998776666665566789999999999978777644
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.53 E-value=2.9e-11 Score=111.03 Aligned_cols=218 Identities=12% Similarity=0.064 Sum_probs=152.9
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.+.++++ +|+++++...++.|.+|+.. .... ..........+..+.+ +++|. ++++...++.|..|+.. ++
T Consensus 16 ~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~~-g~ 88 (299)
T 2z2n_A 16 GPYGITVSDKGKVWITQHKANMISCINLD-GKIT--EYPLPTPDAKVMCLTI--SSDGE-VWFTENAANKIGRITKK-GI 88 (299)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE--EEECSSTTCCEEEEEE--CTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred CccceEECCCCCEEEEecCCCcEEEEcCC-CCeE--EecCCcccCceeeEEE--CCCCC-EEEeCCCCCeEEEECCC-Cc
Confidence 4778877 67777776668899999987 4322 1222223445666666 88887 56666667889999986 33
Q ss_pred eeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE-ecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 269 LSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 269 ~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
. ..+. ....+..+++.|+++++++...++.|.+||. +++.... +..+...+..+++.|+|+++++...++.|..
T Consensus 89 ~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 166 (299)
T 2z2n_A 89 I-KEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGR 166 (299)
T ss_dssp E-EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred E-EEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEE
Confidence 3 2232 3456889999999988887777889999998 5654432 2334567899999999988887777889999
Q ss_pred EEccCCCcceEE-EecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE-eeccccCeEEEEEcCCCCcEEE
Q 013282 345 WDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EIDFFGEISGISFSPDTESLFI 420 (446)
Q Consensus 345 wd~~~~~~~~~~-~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~ 420 (446)
||. . ++.... +......+.+++++++|+++++...++.|.+||. ++..... ...+...+.+++++++|+.+++
T Consensus 167 ~~~-~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 241 (299)
T 2z2n_A 167 ITE-S-GDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFT 241 (299)
T ss_dssp ECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEE
T ss_pred EcC-C-CcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEe
Confidence 998 4 443332 2334456889999999997776666889999998 6653322 2224467899999999885444
No 195
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.53 E-value=8.6e-13 Score=120.46 Aligned_cols=171 Identities=11% Similarity=0.098 Sum_probs=138.8
Q ss_pred EEEEEeCCCcEEEEecCcceeeEeeeCC--CCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-CceeEEE
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSKHFRFP--WPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-DFSFASA 325 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-~~v~~~~ 325 (446)
+|++++.++.|++||.++++.+..+... ..+.++.++|+|++++ +.++.|+.||. +|+.+..+..+. ..+.++.
T Consensus 7 ~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~ 83 (276)
T 3no2_A 7 LLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTAR 83 (276)
T ss_dssp EEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEE
T ss_pred EEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccE
Confidence 7999999999999999999999999843 4689999999999888 45678999998 899999988653 5788999
Q ss_pred ECCCCCEEEEEeC-CCcEEEEEccCCCcceEEEec------CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE
Q 013282 326 WHPNGVTFATGNQ-DKTCRIWDLRNLSESVAVLKG------NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 326 ~~p~~~~l~sgs~-d~~v~iwd~~~~~~~~~~~~~------~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~ 398 (446)
+.|+|+++++.+. ++.|..+|. . ++.+..+.. +......+++.++|++|++...++.|.+||.. |+.+.+
T Consensus 84 ~~~dG~~lv~~~~~~~~v~~vd~-~-Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~ 160 (276)
T 3no2_A 84 ILPDGNALVAWCGHPSTILEVNM-K-GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNS 160 (276)
T ss_dssp ECTTSCEEEEEESTTEEEEEECT-T-SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred ECCCCCEEEEecCCCCEEEEEeC-C-CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEE
Confidence 9999999999887 777777775 3 666666542 22245567889999999999999999999988 888877
Q ss_pred eeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 399 EIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 399 ~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+... ..+.++.+.++|+.++++..+++
T Consensus 161 ~~~~-~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 161 VKLS-GTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp EECS-SCCCEEEECTTSCEEEECBTTSE
T ss_pred EECC-CCccceeEcCCCCEEEEeCCCCe
Confidence 7654 45667888999998887655543
No 196
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.53 E-value=2.8e-11 Score=116.87 Aligned_cols=227 Identities=10% Similarity=0.047 Sum_probs=152.6
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC--cEEEEecCc
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg--~v~iwd~~~ 266 (446)
....|++ +++++++...++.|++|++...... ...... .... +.+ ++++.. |+++..++ .|.+|+...
T Consensus 132 ~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~---~~~~~~-~~~~-ia~--~~~g~~-l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 132 YMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT---TVHPGF-KGGK-PAV--TKDKQR-VYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE---EEEETC-CBCB-CEE--CTTSSE-EEEEBSSTTCEEEEEEGGG
T ss_pred CceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE---EeeccC-CCCc-eeE--ecCCCc-EEEEecCCCceEEEEEcCC
Confidence 4566776 7787888888899999999765332 222222 2222 555 999984 66665554 788998876
Q ss_pred ceeeEee----e-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE----ecCCCCce-e-EEEECCC-CCEEE
Q 013282 267 YQLSKHF----R-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS----LCGHLDFS-F-ASAWHPN-GVTFA 334 (446)
Q Consensus 267 ~~~~~~~----~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~----~~~~~~~v-~-~~~~~p~-~~~l~ 334 (446)
+.....+ . ....+.+++++|++..|+++..++.|+.||..++..... ..++...- . .++|+|+ +.+++
T Consensus 204 ~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv 283 (409)
T 3hrp_A 204 GWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYM 283 (409)
T ss_dssp TTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEE
T ss_pred CceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEE
Confidence 5543344 2 345678999999555566677788999999987764332 22222222 3 8999994 66666
Q ss_pred EEeCCCcEEEEEccCCCcceEEEecCC---------------CceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeE
Q 013282 335 TGNQDKTCRIWDLRNLSESVAVLKGNL---------------GAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~~~~~~---------------~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~ 398 (446)
+-..+++|+.|+... . +..+.++. .....++++|+|+++++-. .++.|+.|++.++. +..
T Consensus 284 ~d~~~~~I~~~~~~g--~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~-v~~ 359 (409)
T 3hrp_A 284 SDQNLSSVYKITPDG--E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGY-VST 359 (409)
T ss_dssp EETTTTEEEEECTTC--C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTE-EEE
T ss_pred EeCCCCEEEEEecCC--C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCE-EEE
Confidence 666788999999842 2 44444432 3478999999999777776 78999999988875 334
Q ss_pred eecc---------------ccCeEEEEEcCCCCcEEEEEecCCcce
Q 013282 399 EIDF---------------FGEISGISFSPDTESLFIGVWDRTYGS 429 (446)
Q Consensus 399 ~~~~---------------~~~v~~~~~spdg~~l~~~~~D~~~~~ 429 (446)
+.++ ...+.+++++|+|.++++-..+.++..
T Consensus 360 ~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~ 405 (409)
T 3hrp_A 360 VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRK 405 (409)
T ss_dssp EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEE
T ss_pred EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEE
Confidence 4443 346899999999765555445555543
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.51 E-value=5e-12 Score=114.63 Aligned_cols=195 Identities=11% Similarity=0.071 Sum_probs=136.6
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
+.++++ +++++++.. ++.|.+|+....... .........+..+.+ +++|. ++++...++.|.+|+..+...
T Consensus 69 p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~---~~~~~~~~~p~~i~~--~~~g~-l~v~~~~~~~i~~~~~~~~~~ 141 (270)
T 1rwi_B 69 PQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT---VLPFDGLNYPEGLAV--DTQGA-VYVADRGNNRVVKLAAGSKTQ 141 (270)
T ss_dssp CCCEEECTTCCEEEEET-TTEEEEECTTCSCCE---ECCCCSCSSEEEEEE--CTTCC-EEEEEGGGTEEEEECTTCCSC
T ss_pred cceeEECCCCCEEEEcC-CCEEEEEeCCCceEe---eeecCCcCCCcceEE--CCCCC-EEEEECCCCEEEEEECCCcee
Confidence 445555 677666666 889999998654322 111122244566666 88887 666666788999998665443
Q ss_pred eEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 270 SKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
..... ....+..++++|+|+++++...++.|.+||...+........+...+.+++++|+|.++++...++.|.+|+..
T Consensus 142 ~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~ 221 (270)
T 1rwi_B 142 TVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAG 221 (270)
T ss_dssp EECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTT
T ss_pred EeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCC
Confidence 32222 23457889999999977777778899999988766544333344678899999999888877778899999985
Q ss_pred CCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCe
Q 013282 349 NLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGY 394 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~ 394 (446)
. .........+...+.+++++|+|+++++...++.|++|++...+
T Consensus 222 ~-~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 222 S-TTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp C-SCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred C-CcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 3 32222222233568899999999988888889999999987543
No 198
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.51 E-value=4.3e-11 Score=119.96 Aligned_cols=215 Identities=14% Similarity=0.047 Sum_probs=152.4
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC--cceeeEeeeC
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFRF 275 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~--~~~~~~~~~~ 275 (446)
.+.++++...+++|.++|..+...... + .. ...+..+.+ +|+|+ ++++++.++.|.+||+. +++.+..+..
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~--i-~~-g~~p~~v~~--SpDGr-~lyv~~~dg~V~viD~~~~t~~~v~~i~~ 238 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTV--L-DT-GYAVHISRL--SASGR-YLFVIGRDGKVNMIDLWMKEPTTVAEIKI 238 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEE--E-EC-SSCEEEEEE--CTTSC-EEEEEETTSEEEEEETTSSSCCEEEEEEC
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEE--E-eC-CCCccceEE--CCCCC-EEEEEcCCCeEEEEECCCCCCcEeEEEec
Confidence 456778888899999999988765432 2 11 223445655 99998 57777899999999995 8888888876
Q ss_pred CCCeeEEEEC----CCCCEEEEEe-cCCcEEEEECCCCceEEEecC----------CC-CceeEEEECCCCCEEE-EEeC
Q 013282 276 PWPVNHSSQS----PDGKLLIIVG-DNPDGLLVDSMTGKTIASLCG----------HL-DFSFASAWHPNGVTFA-TGNQ 338 (446)
Q Consensus 276 ~~~v~~~~~s----p~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~----------~~-~~v~~~~~~p~~~~l~-sgs~ 338 (446)
......++|+ |+|++++++. ..+.|.++|..+.+++..+.. |. ..+..+..++++..++ +...
T Consensus 239 G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~ 318 (567)
T 1qks_A 239 GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKE 318 (567)
T ss_dssp CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETT
T ss_pred CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecC
Confidence 5567899999 6999887765 469999999999998887652 11 2577888888765544 4455
Q ss_pred CCcEEEEEccCCCcc-eEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeec-----cccCeEEEEE
Q 013282 339 DKTCRIWDLRNLSES-VAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID-----FFGEISGISF 411 (446)
Q Consensus 339 d~~v~iwd~~~~~~~-~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~ 411 (446)
.|.|.++|....... +..+ ........+.|+|+|++++++. .++.|.++|+.+++....+.- |.+.-..+ +
T Consensus 319 ~g~v~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~ 396 (567)
T 1qks_A 319 TGKILLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-V 396 (567)
T ss_dssp TTEEEEEETTCSSEEEEEEE-ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-E
T ss_pred CCeEEEEecCCCccceeeee-eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-E
Confidence 799999998653222 2222 2234567889999999887766 578899999999986655542 32222222 5
Q ss_pred cCCCCcEEEE
Q 013282 412 SPDTESLFIG 421 (446)
Q Consensus 412 spdg~~l~~~ 421 (446)
+|++..+++.
T Consensus 397 ~p~~g~v~~t 406 (567)
T 1qks_A 397 HPTFGPVWAT 406 (567)
T ss_dssp ETTTEEEEEE
T ss_pred CCCCCcEEEe
Confidence 7875555443
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.51 E-value=5.6e-12 Score=130.61 Aligned_cols=221 Identities=13% Similarity=-0.003 Sum_probs=147.2
Q ss_pred eEEEEEe--CCcEEE-----EeccCCcEEEEEcCCCCeeeEEEEeecCCCce--eeEEEEeCCCCCeEEEEEeCCCc---
Q 013282 191 QVSTLAV--KDKLLV-----AGGFQGELICKHLDRPGVSFCSRTTYDDNAIT--NAVEIYGSPSGAVHFTASNNDCG--- 258 (446)
Q Consensus 191 ~v~~l~~--~~~~l~-----tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v--~~i~~~~s~~~~~~l~s~s~dg~--- 258 (446)
.+.+++| +|++|| .|+.+.+|++|++.++.... ..+...+ ..+. |+|+|+. |+.++.+..
T Consensus 122 ~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-----~~~~~~~~~~~~~--wspDg~~-l~~~~~d~~~~~ 193 (695)
T 2bkl_A 122 SLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-----VDVIEGGKYATPK--WTPDSKG-FYYEWLPTDPSI 193 (695)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-----SCCBSCCTTCCCE--ECTTSSE-EEEEECCCCTTS
T ss_pred EEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-----CcccCcccccceE--EecCCCE-EEEEEecCCCCC
Confidence 4666666 999998 44556789999998875320 1111112 3444 4999985 666666665
Q ss_pred ----------EEEEecCccee--eEeee---CCCCeeEEEECCCCCEEEEEecCC----cEEEEECCCCceEEEecCCCC
Q 013282 259 ----------VRDFDMGKYQL--SKHFR---FPWPVNHSSQSPDGKLLIIVGDNP----DGLLVDSMTGKTIASLCGHLD 319 (446)
Q Consensus 259 ----------v~iwd~~~~~~--~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~ 319 (446)
|++|++.+++. ...+. +...+..+.|+|||++|++++.++ .|++|+..+++ ...+..+..
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~ 272 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG 272 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS
T ss_pred ccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC
Confidence 99999987652 22222 345788999999999998877665 77888766554 444555555
Q ss_pred ceeEEEECCCCCEEEEEe---CCCcEEEEEccCCCcc--eEEEecC--CCceEEEEEccCCCEEEEEeCCCeEEEEEcC-
Q 013282 320 FSFASAWHPNGVTFATGN---QDKTCRIWDLRNLSES--VAVLKGN--LGAIRSIRYTSDGRYMATAEPADFVHVYDVK- 391 (446)
Q Consensus 320 ~v~~~~~~p~~~~l~sgs---~d~~v~iwd~~~~~~~--~~~~~~~--~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~- 391 (446)
.+....| |+|.++++.. .++.|.+||+.. +.. ...+..+ ...+..++|+ ++.++++...++..+||.+.
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~-~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 349 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAK-PARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATL 349 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTB-CSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCC-CCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 6666667 5666444444 257899999965 332 2444433 4467888888 67788888889988877554
Q ss_pred CCeeEeEeecc-ccCeEEEEEcCCCCcEEEEEe
Q 013282 392 SGYEKEQEIDF-FGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 392 ~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~ 423 (446)
++.....+..+ .+.+..++++|+++.|+....
T Consensus 350 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 382 (695)
T 2bkl_A 350 KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFT 382 (695)
T ss_dssp TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEE
T ss_pred CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEc
Confidence 35445555433 567888899999987775433
No 200
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.50 E-value=3.2e-12 Score=132.43 Aligned_cols=228 Identities=11% Similarity=-0.051 Sum_probs=146.8
Q ss_pred EeCCcEEEEeccCC---cEEEEEcCCCCeeeEEEEee------cCCCceeeEEEEeCCCCCeEEEEEeC----CCcEEEE
Q 013282 196 AVKDKLLVAGGFQG---ELICKHLDRPGVSFCSRTTY------DDNAITNAVEIYGSPSGAVHFTASNN----DCGVRDF 262 (446)
Q Consensus 196 ~~~~~~l~tg~~dg---~i~vw~~~~~~~~~~~~~~~------~~~~~v~~i~~~~s~~~~~~l~s~s~----dg~v~iw 262 (446)
.++|++++....++ .-.+|.....+... ..++. +|...+..+.+ ||+|+.++++.+. +..|++|
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~l~d~~~~a~~~~~~~~~~~~--SPDG~~la~~~~~~G~~~~~i~v~ 152 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQE-KVLLDPNGWSKDGTVSLGTWAV--SWDGKKVAFAQKPNAADEAVLHVI 152 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCC-EEEECGGGSSSSSCEEEEEEEE--CTTSSEEEEEEEETTCSCCEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCc-EEEEchHHhccCCCEEEEEEEE--CCCCCEEEEEECCCCCceEEEEEE
Confidence 35777777665543 24445443222111 12221 23334555555 9999965555443 4579999
Q ss_pred ecCcceee-EeeeCCCCeeEEEECCCCCEEEEEecCCc-------------EEEEECCCCc----eEEEecCCCCceeEE
Q 013282 263 DMGKYQLS-KHFRFPWPVNHSSQSPDGKLLIIVGDNPD-------------GLLVDSMTGK----TIASLCGHLDFSFAS 324 (446)
Q Consensus 263 d~~~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-------------i~i~d~~~~~----~~~~~~~~~~~v~~~ 324 (446)
|+.+++.+ ...........++|+|||+.|+.++.+.. |++|++.+++ ++.....+...+.++
T Consensus 153 dl~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~ 232 (695)
T 2bkl_A 153 DVDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQS 232 (695)
T ss_dssp ETTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEE
T ss_pred ECCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEE
Confidence 99998875 21111112268999999999999988765 9999998876 333334456788999
Q ss_pred EECCCCCEEEEEeCCC----cEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEe---CCCeEEEEEcCCCee--
Q 013282 325 AWHPNGVTFATGNQDK----TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE---PADFVHVYDVKSGYE-- 395 (446)
Q Consensus 325 ~~~p~~~~l~sgs~d~----~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~---~dg~i~iwd~~~~~~-- 395 (446)
+|+|+|++|+.++.++ .|.+|+.. ......+..+...+....| ++|.+++.+. .++.|.+||+.++..
T Consensus 233 ~~SpDG~~l~~~~~~~~~~~~l~~~~~~--~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 233 DLSRDGKYLFVYILRGWSENDVYWKRPG--EKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp EECTTSCCEEEEEEETTTEEEEEEECTT--CSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred EECCCCCEEEEEEeCCCCceEEEEEcCC--CCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccC
Confidence 9999999998887665 56666553 3345566666666667777 6676444433 257899999987642
Q ss_pred EeEeecc--ccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 396 KEQEIDF--FGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 396 ~~~~~~~--~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
...+..+ ...+.+++|+ ++.++++...|+....+
T Consensus 310 ~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 345 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVR 345 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred CeEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 2344443 3457888888 66777777777765544
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.49 E-value=6.9e-12 Score=130.87 Aligned_cols=234 Identities=9% Similarity=-0.066 Sum_probs=146.6
Q ss_pred EEEEEeCCcEEEEeccCCc---EEEEEcCCC---CeeeEEE-----EeecCCCceeeEEEEeCCCCCeEEEEEeCCC---
Q 013282 192 VSTLAVKDKLLVAGGFQGE---LICKHLDRP---GVSFCSR-----TTYDDNAITNAVEIYGSPSGAVHFTASNNDC--- 257 (446)
Q Consensus 192 v~~l~~~~~~l~tg~~dg~---i~vw~~~~~---~~~~~~~-----~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg--- 257 (446)
+....++|++++....++. -.+|..... +...... ...++...+..+.+ ||+|+.++++.+..|
T Consensus 111 ~~~p~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~--SPDG~~la~~~~~~G~e~ 188 (741)
T 1yr2_A 111 FGLPQRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAA--SDDGRLLAYSVQDGGSDW 188 (741)
T ss_dssp ECCCEEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEE--CTTSSEEEEEEEETTCSE
T ss_pred cCCCEEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEE--CCCCCEEEEEEcCCCCce
Confidence 3333468888877665443 455654432 1111111 11122223445555 999996555555444
Q ss_pred -cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCCc--------------EEEEECCCCce--EEEec--CCC
Q 013282 258 -GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPD--------------GLLVDSMTGKT--IASLC--GHL 318 (446)
Q Consensus 258 -~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~--------------i~i~d~~~~~~--~~~~~--~~~ 318 (446)
.|++||+.+++.+........+..++|+|| +.|+.++.++. |++|++.+++. ...+. .+.
T Consensus 189 ~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~ 267 (741)
T 1yr2_A 189 RTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELP 267 (741)
T ss_dssp EEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCT
T ss_pred EEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCC
Confidence 599999999987654322222467899999 99988876544 89999987752 22233 344
Q ss_pred CceeEEEECCCCCEEEEEeCCC-----cEEEEEccCCCcc-eEEEecCCCceEEEEEccCCCEEEEEeCC----CeEEEE
Q 013282 319 DFSFASAWHPNGVTFATGNQDK-----TCRIWDLRNLSES-VAVLKGNLGAIRSIRYTSDGRYMATAEPA----DFVHVY 388 (446)
Q Consensus 319 ~~v~~~~~~p~~~~l~sgs~d~-----~v~iwd~~~~~~~-~~~~~~~~~~v~~l~~s~dg~~l~~~~~d----g~i~iw 388 (446)
..+..+.|+|+|++|+..+.++ .|.+||+...... ...+..+...+.... +|+|+.|+..+.. +.|.+|
T Consensus 268 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~ 346 (741)
T 1yr2_A 268 KRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRV 346 (741)
T ss_dssp TCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEE
T ss_pred eEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEE
Confidence 4688999999999998887544 7999999652113 566666655555553 4899988887753 459999
Q ss_pred EcCCC-eeEeEeec-cccCeEEEEEcCCCCcEEEEEecCCcceE
Q 013282 389 DVKSG-YEKEQEID-FFGEISGISFSPDTESLFIGVWDRTYGSL 430 (446)
Q Consensus 389 d~~~~-~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~D~~~~~~ 430 (446)
|+.++ .....+.. +...+.+++|+ ++.++++...|+....+
T Consensus 347 d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~ 389 (741)
T 1yr2_A 347 DLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVL 389 (741)
T ss_dssp ECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEE
T ss_pred eCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEE
Confidence 99875 23334433 44456677887 45566666667655433
No 202
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.48 E-value=4.2e-10 Score=103.24 Aligned_cols=221 Identities=11% Similarity=-0.013 Sum_probs=150.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.+.++++ +++++++...++.|.+++.. .... ..........+..+.+ .++|. ++++...++.|..++.. ++
T Consensus 63 ~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~i~~~~~~-g~ 135 (300)
T 2qc5_A 63 KVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT--EYPLPQPDSGPYGITE--GLNGD-IWFTQLNGDRIGKLTAD-GT 135 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEECSSTTCCEEEEEE--CSTTC-EEEEETTTTEEEEECTT-SC
T ss_pred cceeEEECCCCCEEEEecCCCeEEEECCC-CCeE--EecCCCCCCCCccceE--CCCCC-EEEEccCCCeEEEECCC-CC
Confidence 4677777 67777777768889999876 4322 1222223345666666 78886 56666667899999987 55
Q ss_pred eeEe-ee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE-ecCCCCceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 269 LSKH-FR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 269 ~~~~-~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
.... +. ....+..+++.|++++.++...++.|..+|. +++.... +..+...+..+++.++|+++++....+.|.+|
T Consensus 136 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~ 214 (300)
T 2qc5_A 136 IYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRI 214 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEE
T ss_pred EEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEE
Confidence 4422 22 3456889999999996666666788999998 5654432 22344578899999999877777677789999
Q ss_pred EccCCCcceEE-EecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeE-eEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 346 DLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEK-EQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 346 d~~~~~~~~~~-~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
|. . +..... +..+...+.+++++++|++.++...++.|..|+. ++... ..+......+.+++++++|+. +++..
T Consensus 215 ~~-~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~ 290 (300)
T 2qc5_A 215 TT-T-GEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSV-WFALK 290 (300)
T ss_dssp CT-T-CCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCE-EEECS
T ss_pred cC-C-CcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCE-EEEcc
Confidence 98 3 333322 3334566889999999996666656789999998 44332 222223456889999999874 44443
No 203
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=1.1e-10 Score=109.30 Aligned_cols=213 Identities=16% Similarity=0.091 Sum_probs=144.4
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC---
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF--- 275 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~--- 275 (446)
+.+++++..++.|.+|+..+.... .. . ....+.++.+ +++|. ++++ +.+ .|.+||..+++.......
T Consensus 61 ~~l~~~d~~~~~i~~~d~~~~~~~---~~-~-~~~~v~~i~~--~~dg~-l~v~-~~~-gl~~~d~~~g~~~~~~~~~~~ 130 (326)
T 2ghs_A 61 GTAWWFNILERELHELHLASGRKT---VH-A-LPFMGSALAK--ISDSK-QLIA-SDD-GLFLRDTATGVLTLHAELESD 130 (326)
T ss_dssp TEEEEEEGGGTEEEEEETTTTEEE---EE-E-CSSCEEEEEE--EETTE-EEEE-ETT-EEEEEETTTCCEEEEECSSTT
T ss_pred CEEEEEECCCCEEEEEECCCCcEE---EE-E-CCCcceEEEE--eCCCe-EEEE-ECC-CEEEEECCCCcEEEEeeCCCC
Confidence 567777778899999998765322 11 1 2345666665 78886 3444 344 499999988776543332
Q ss_pred --CCCeeEEEECCCCCEEEEEec------CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcEEEEE
Q 013282 276 --PWPVNHSSQSPDGKLLIIVGD------NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWD 346 (446)
Q Consensus 276 --~~~v~~~~~sp~~~~l~~~~~------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~iwd 346 (446)
...++.++++|+|+++++... .+.|+.++ +++.. .+..+......++|+|+|+.++.+ +.++.|.+||
T Consensus 131 ~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 131 LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 124789999999997665432 24666667 45543 333333456789999999877555 4578999999
Q ss_pred cc-CCC-c-----ceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEc-CCCCcE
Q 013282 347 LR-NLS-E-----SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS-PDTESL 418 (446)
Q Consensus 347 ~~-~~~-~-----~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s-pdg~~l 418 (446)
+. ..+ . ....+....+.+..++++++|++.++...++.|.+||. +++.+..+..+...+.+++|+ |+++.|
T Consensus 208 ~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L 286 (326)
T 2ghs_A 208 LDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRL 286 (326)
T ss_dssp BCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEE
T ss_pred cccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEE
Confidence 85 123 2 12222233456788999999997777767788999998 566666666566679999998 999888
Q ss_pred EEEEecC
Q 013282 419 FIGVWDR 425 (446)
Q Consensus 419 ~~~~~D~ 425 (446)
++++...
T Consensus 287 ~vt~~~~ 293 (326)
T 2ghs_A 287 LVTSARE 293 (326)
T ss_dssp EEEEBCT
T ss_pred EEEecCC
Confidence 8776554
No 204
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.46 E-value=2.3e-10 Score=104.98 Aligned_cols=219 Identities=10% Similarity=0.005 Sum_probs=151.9
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.+.++++ +++++++...++.|.+|+.. .... ..........+..+.+ .++|. ++++...++.|..||.. ++
T Consensus 21 ~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~--~~~~~~~~~~~~~i~~--~~~g~-l~v~~~~~~~v~~~d~~-g~ 93 (300)
T 2qc5_A 21 GPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK--EFEVPTPDAKVMCLIV--SSLGD-IWFTENGANKIGKLSKK-GG 93 (300)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE--EEECSSTTCCEEEEEE--CTTSC-EEEEETTTTEEEEECTT-SC
T ss_pred CcceeeECCCCCEEEEcCCCCeEEEECCC-CceE--EEECCCCCCcceeEEE--CCCCC-EEEEecCCCeEEEECCC-CC
Confidence 4667777 67777777778999999987 4322 1122222345566666 88886 56666567889999987 55
Q ss_pred eeEeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEE-ecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 269 LSKHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIAS-LCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 269 ~~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
.. .+. ....+..+++.+++++.++...++.|..+|.. ++.... +......+.++++.|+|+++++...++.|..
T Consensus 94 ~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 171 (300)
T 2qc5_A 94 FT-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGR 171 (300)
T ss_dssp EE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEE
T ss_pred eE-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEE
Confidence 43 232 33568999999999987777768899999987 655432 3334567899999999997777666788999
Q ss_pred EEccCCCcceEE-EecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE-eeccccCeEEEEEcCCCCcEEEE
Q 013282 345 WDLRNLSESVAV-LKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ-EIDFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 345 wd~~~~~~~~~~-~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~-~~~~~~~v~~~~~spdg~~l~~~ 421 (446)
+|. . ++.... ...+...+..++++++|++.++....+.|.+|+. ++..... .......+.+++++++|+..++.
T Consensus 172 ~~~-~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 172 ITN-T-GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ECT-T-CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEE
T ss_pred ECC-C-CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEec
Confidence 998 4 333322 2233456889999999987776666778999998 4543322 22345678999999998844433
No 205
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.42 E-value=9.2e-11 Score=108.63 Aligned_cols=216 Identities=14% Similarity=0.043 Sum_probs=145.6
Q ss_pred EEEEe--CCc-EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 193 STLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 193 ~~l~~--~~~-~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
....| +++ +++++..++.|..|+.. +.. ..+......++.+.+ +++|. ++++...++.|.+|+.. ++.
T Consensus 48 egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~----~~~~~~~~~~~gl~~--d~dG~-l~v~~~~~~~v~~~~~~-g~~ 118 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV----DVLLDATAFTNGNAV--DAQQR-LVHCEHGRRAITRSDAD-GQA 118 (305)
T ss_dssp EEEEEEGGGTEEEEEETTTTEEEEEETT-SCE----EEEEESCSCEEEEEE--CTTSC-EEEEETTTTEEEEECTT-SCE
T ss_pred cCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE----EEEeCCCCccceeeE--CCCCC-EEEEECCCCEEEEECCC-CCE
Confidence 34445 666 67788888999999873 332 222234455677766 89987 55555556789999986 554
Q ss_pred eEeee-----CCCCeeEEEECCCCCEEEE----Eec-------------CCcEEEEECCCCceEEEecCCCCceeEEEEC
Q 013282 270 SKHFR-----FPWPVNHSSQSPDGKLLII----VGD-------------NPDGLLVDSMTGKTIASLCGHLDFSFASAWH 327 (446)
Q Consensus 270 ~~~~~-----~~~~v~~~~~sp~~~~l~~----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 327 (446)
..... ....++.++++|+|++.++ |.. .+.|+.+|..+++..... .......++|+
T Consensus 119 ~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~s 196 (305)
T 3dr2_A 119 HLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFS 196 (305)
T ss_dssp EEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEEC
T ss_pred EEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEc
Confidence 33222 1234678999999998776 331 356888888777654433 34556889999
Q ss_pred CCCCEEEEEeCC------CcEEEEEccCCCcc--eEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE
Q 013282 328 PNGVTFATGNQD------KTCRIWDLRNLSES--VAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 328 p~~~~l~sgs~d------~~v~iwd~~~~~~~--~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~ 398 (446)
|+++.|+.+... +.|.+|++.. ... ...+ ....+.+..++++++|++. +++.++ |.+|+. .++.+..
T Consensus 197 pdg~~lyv~~~~~~~~~~~~i~~~~~~~-~~l~~~~~~~~~~~~~pdgi~~d~~G~lw-v~~~~g-v~~~~~-~g~~~~~ 272 (305)
T 3dr2_A 197 PDEQTLYVSQTPEQGHGSVEITAFAWRD-GALHDRRHFASVPDGLPDGFCVDRGGWLW-SSSGTG-VCVFDS-DGQLLGH 272 (305)
T ss_dssp TTSSEEEEEECCC---CCCEEEEEEEET-TEEEEEEEEECCSSSCCCSEEECTTSCEE-ECCSSE-EEEECT-TSCEEEE
T ss_pred CCCCEEEEEecCCcCCCCCEEEEEEecC-CCccCCeEEEECCCCCCCeEEECCCCCEE-EecCCc-EEEECC-CCCEEEE
Confidence 999988777665 6899999864 221 1111 1123456678999999944 444444 999997 4666666
Q ss_pred eeccccCeEEEEEcCCCCcEEEEEec
Q 013282 399 EIDFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 399 ~~~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
+.... .+.+++|+|+++.|++++.+
T Consensus 273 ~~~~~-~~~~~~f~~d~~~L~it~~~ 297 (305)
T 3dr2_A 273 IPTPG-TASNCTFDQAQQRLFITGGP 297 (305)
T ss_dssp EECSS-CCCEEEECTTSCEEEEEETT
T ss_pred EECCC-ceeEEEEeCCCCEEEEEcCC
Confidence 55444 58899999999999988765
No 206
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.41 E-value=2.4e-10 Score=105.83 Aligned_cols=220 Identities=10% Similarity=0.050 Sum_probs=143.1
Q ss_pred cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--C-CcEEEEeccCCcEEEEEcCCCCeeeEE
Q 013282 149 SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--K-DKLLVAGGFQGELICKHLDRPGVSFCS 225 (446)
Q Consensus 149 ~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~-~~~l~tg~~dg~i~vw~~~~~~~~~~~ 225 (446)
.++.|..|+..+++...... . .. .+ ....+.++++ + ++++++. ..+.|.+|+.. +...
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~-~-~~------~~------~~~~~~~i~~~~~~g~l~v~~-~~~~l~~~d~~-g~~~--- 104 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICK-P-EV------NG------YGGIPAGCQCDRDANQLFVAD-MRLGLLVVQTD-GTFE--- 104 (314)
T ss_dssp ECCEEEEECTTTCCEEEEEC-C-EE------TT------EECCEEEEEECSSSSEEEEEE-TTTEEEEEETT-SCEE---
T ss_pred CCCEEEEEeCCCCcEEEEEe-c-cc------CC------CCCCCceEEEecCCCcEEEEE-CCCCEEEEeCC-CCEE---
Confidence 35678899876665432221 0 00 00 0014677777 4 4444444 44468899987 4322
Q ss_pred EE-eec----CCCceeeEEEEeCCCCCeEEEEEeCC---------------CcEEEEecCcceeeEeeeCCCCeeEEEEC
Q 013282 226 RT-TYD----DNAITNAVEIYGSPSGAVHFTASNND---------------CGVRDFDMGKYQLSKHFRFPWPVNHSSQS 285 (446)
Q Consensus 226 ~~-~~~----~~~~v~~i~~~~s~~~~~~l~s~s~d---------------g~v~iwd~~~~~~~~~~~~~~~v~~~~~s 285 (446)
.. ... ....+..+.+ +++|. ++++...+ +.|..|+.. ++.............++++
T Consensus 105 ~~~~~~~~~~~~~~~~~i~~--d~~g~-l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~ 180 (314)
T 1pjx_A 105 EIAKKDSEGRRMQGCNDCAF--DYEGN-LWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVR 180 (314)
T ss_dssp ECCSBCTTSCBCBCCCEEEE--CTTSC-EEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEE
T ss_pred EEEeccCCCccccCCcCEEE--CCCCC-EEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEe
Confidence 22 111 1123556666 89987 45555444 567778776 5554444444456889999
Q ss_pred ----CCCCEEEEE-ecCCcEEEEECC-CCc-----eEEEecCCC-CceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcc
Q 013282 286 ----PDGKLLIIV-GDNPDGLLVDSM-TGK-----TIASLCGHL-DFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 353 (446)
Q Consensus 286 ----p~~~~l~~~-~~d~~i~i~d~~-~~~-----~~~~~~~~~-~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~ 353 (446)
|+++.++++ ..++.|.+||+. +++ ....+.++. ..+..++++++|+++++...++.|.+||..+ ++.
T Consensus 181 ~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~-g~~ 259 (314)
T 1pjx_A 181 HMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG-GQP 259 (314)
T ss_dssp ECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC-BSC
T ss_pred cccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC-CcE
Confidence 999766555 567899999986 454 223344444 5678899999999888888888999999854 455
Q ss_pred eEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCC
Q 013282 354 VAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKS 392 (446)
Q Consensus 354 ~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~ 392 (446)
+..+..+...+.+++|+|+|+.|++++ .++.|..|++..
T Consensus 260 ~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 260 KMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred eEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 666666667899999999999665554 567899999865
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.41 E-value=1e-10 Score=122.09 Aligned_cols=223 Identities=15% Similarity=0.071 Sum_probs=145.8
Q ss_pred eEEEEEe--CCcEEEEeccC-----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC------
Q 013282 191 QVSTLAV--KDKLLVAGGFQ-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC------ 257 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg------ 257 (446)
.+..++| +|++||.+..+ .+|++|++.++..... ... ...+..+. |+|+ +. |+.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~--~~~--~~~~~~~~--wspD-~~-l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD--ELK--WVKFSGLA--WLGN-DA-LLYSRFAEPKEGQA 235 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE--EEE--EEESCCCE--ESTT-SE-EEEEECCCC-----
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc--cCC--CceeccEE--EECC-CE-EEEEEecCcccccc
Confidence 4566666 89999887654 4699999988764321 111 11123444 5999 75 44444444
Q ss_pred --------cEEEEecCccee--eEeee---CCCCeeEEEECCCCCEEEEEecCC-----cEEEEECCCC--ceEEEecCC
Q 013282 258 --------GVRDFDMGKYQL--SKHFR---FPWPVNHSSQSPDGKLLIIVGDNP-----DGLLVDSMTG--KTIASLCGH 317 (446)
Q Consensus 258 --------~v~iwd~~~~~~--~~~~~---~~~~v~~~~~sp~~~~l~~~~~d~-----~i~i~d~~~~--~~~~~~~~~ 317 (446)
.|++|++.++.. ...+. ++..+..+.|+|||++|+..+.++ .|++||+.++ +....+..+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 315 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPD 315 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECS
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCC
Confidence 389999977652 22233 223588999999999998877543 8999999877 314555555
Q ss_pred CCceeEEEECCCCCEEEEEeCC----CcEEEEEccCC-CcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC-
Q 013282 318 LDFSFASAWHPNGVTFATGNQD----KTCRIWDLRNL-SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK- 391 (446)
Q Consensus 318 ~~~v~~~~~~p~~~~l~sgs~d----~~v~iwd~~~~-~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~- 391 (446)
...+.... +|+|+.|+..+.+ +.|.+||+... ......+..+...+..++|+ ++.++++...++..+||.+.
T Consensus 316 ~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~ 393 (741)
T 1yr2_A 316 LKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDL 393 (741)
T ss_dssp SSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEET
T ss_pred CCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeC
Confidence 55555554 4889988887763 45999998652 23334444455567778887 56677888888887776543
Q ss_pred CCeeEeEeec-cccCeEEEEEcCCCCcEEEEEe
Q 013282 392 SGYEKEQEID-FFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 392 ~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~ 423 (446)
++.....+.. ..+.+..++++|+++.|+....
T Consensus 394 ~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~s 426 (741)
T 1yr2_A 394 DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFS 426 (741)
T ss_dssp TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEE
T ss_pred CCCceeeccCCCCeEEEEeecCCCCCEEEEEEc
Confidence 3444555443 3567889999999987775533
No 208
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.41 E-value=7.6e-12 Score=118.60 Aligned_cols=171 Identities=15% Similarity=0.090 Sum_probs=123.8
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCe-------eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGV-------SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~-------~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
++..|++ ..+++++|+.++ +++|++..... .........+.. |..+.| ++. .|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f----d~~-~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF----HGD-QVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE----ETT-EEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE----CCC-EEEEE-cCCcEEE
Confidence 3555555 788999999886 56698653220 000111223445 777766 666 57776 8899999
Q ss_pred EecCcceeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCC
Q 013282 262 FDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 262 wd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
||+.+........ +..++.++.+.+. .+++++.+|.|.+||+.+++... +...|.|++|+|.| ++.|..||
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTS
T ss_pred EEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCC
Confidence 9997755444443 6677888877654 38889999999999999887654 34589999999999 67899999
Q ss_pred cEEEEEccCCCcc--eEEE------e---cCCCceEEEEEccCCCEEEE
Q 013282 341 TCRIWDLRNLSES--VAVL------K---GNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 341 ~v~iwd~~~~~~~--~~~~------~---~~~~~v~~l~~s~dg~~l~~ 378 (446)
++++|+... ... ..++ . +|...|.+|+|.+++.++++
T Consensus 183 ~i~~~~~~~-~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 183 SFQSFAWRN-GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp CEEEEEEET-TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred cEEEEcCCC-ccccccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 999998854 443 4555 2 36788999999999998876
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.40 E-value=1.9e-09 Score=102.65 Aligned_cols=226 Identities=9% Similarity=-0.081 Sum_probs=145.8
Q ss_pred EEEeCCcEEEEec----------cCCcEEEEEcCCCCeeeEEEEe-ecC---CCceeeEEEEeCCCCCeEEEEEeC-CCc
Q 013282 194 TLAVKDKLLVAGG----------FQGELICKHLDRPGVSFCSRTT-YDD---NAITNAVEIYGSPSGAVHFTASNN-DCG 258 (446)
Q Consensus 194 ~l~~~~~~l~tg~----------~dg~i~vw~~~~~~~~~~~~~~-~~~---~~~v~~i~~~~s~~~~~~l~s~s~-dg~ 258 (446)
.+++++++|+.+. .++.|.+||..+........+. ... ......+.+ +|+|+.++++... ++.
T Consensus 72 ~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~--spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 72 VAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNAN--TPNNADLLFFQFAAGPA 149 (373)
T ss_pred EECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEE--CCCCCEEEEEecCCCCe
Confidence 4556898888875 3678999999876544322211 000 111234444 9999964444433 588
Q ss_pred EEEEecCcceeeEe-eeCCCCeeEEEECCCC-CEEEEEecCCcEEEEECCCCceEEEec-----CCCCce-eEEEECCCC
Q 013282 259 VRDFDMGKYQLSKH-FRFPWPVNHSSQSPDG-KLLIIVGDNPDGLLVDSMTGKTIASLC-----GHLDFS-FASAWHPNG 330 (446)
Q Consensus 259 v~iwd~~~~~~~~~-~~~~~~v~~~~~sp~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v-~~~~~~p~~ 330 (446)
|.++| .+++.+.. +..+.. +.+.|++ +.+++.+.+|.+.++|. +++.+.... ....++ ....+.+++
T Consensus 150 v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 224 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKS 224 (373)
T ss_pred EEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecC
Confidence 99999 99998888 665443 4455655 45566778999999999 887764332 111222 234566666
Q ss_pred CEEEEEeCCCcEEEEEccCCC-cceEEEec----------CCCceEEEEEccCCCEEEEEeC----------CCeEEEEE
Q 013282 331 VTFATGNQDKTCRIWDLRNLS-ESVAVLKG----------NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYD 389 (446)
Q Consensus 331 ~~l~sgs~d~~v~iwd~~~~~-~~~~~~~~----------~~~~v~~l~~s~dg~~l~~~~~----------dg~i~iwd 389 (446)
..++..+..+.+.+.|+.... ..+..+.. .......++++|+++.|+++.. .+.|.++|
T Consensus 225 ~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID 304 (373)
T 2mad_H 225 GRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVT 304 (373)
T ss_pred CEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEE
Confidence 555555578899999985421 12222211 1123445789999998877653 35799999
Q ss_pred cCCCeeEeEeeccccCeEEEEEcCCCC-cEEEEEe-cCCc
Q 013282 390 VKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW-DRTY 427 (446)
Q Consensus 390 ~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~-D~~~ 427 (446)
+.+++.+..+. ..+...+++|+|||+ +|+++.+ ++++
T Consensus 305 ~~t~~vv~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V 343 (373)
T 2mad_H 305 GLVGQTSSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVL 343 (373)
T ss_pred CCCCEEEEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeE
Confidence 99998877774 444689999999999 7887764 4444
No 210
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=1.9e-10 Score=108.38 Aligned_cols=231 Identities=13% Similarity=-0.013 Sum_probs=148.5
Q ss_pred eEEEEEe--CCcEEEEec--cCCcEEEEEcCCCCeeeEE----EEeecCCCceeeEEEEeCCCCCeEEEEEeC-----CC
Q 013282 191 QVSTLAV--KDKLLVAGG--FQGELICKHLDRPGVSFCS----RTTYDDNAITNAVEIYGSPSGAVHFTASNN-----DC 257 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~--~dg~i~vw~~~~~~~~~~~----~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~-----dg 257 (446)
....+++ +|+++++.. .+|.++||.+. .+..... .....+...+..+.+ ++++. ++++-.. +.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~-~g~~~~~p~~~~~~~~~~~~p~gv~~--d~~g~-L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELT-QDGLIPFPPQSGNAIITFDTVLGIKS--DGNGI-VWMLDNGNQSKSVP 93 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEE-TTEEEESCCCCSSCCCCCSCEEEEEE--CSSSE-EEEEECHHHHTSCC
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEEC-CCCeecCCCcccCcccceeEeeEEEE--cCCCc-EEEEcCCCCcCCCC
Confidence 3566666 788888863 23436667665 3221100 000122345566666 88876 4444333 57
Q ss_pred cEEEEecCcceeeEeeeCC-------CCeeEEEECCCCCEE-EEEe---cCCcEEEEECCCCceEEEecCCC--------
Q 013282 258 GVRDFDMGKYQLSKHFRFP-------WPVNHSSQSPDGKLL-IIVG---DNPDGLLVDSMTGKTIASLCGHL-------- 318 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~-------~~v~~~~~sp~~~~l-~~~~---~d~~i~i~d~~~~~~~~~~~~~~-------- 318 (446)
.|.+||+.+++.+..+..+ ..++.++++|++..+ ++.. .++.|.+||+.+++..+.+.+|.
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 8999999999987776632 246899999865555 4444 57899999999888776664421
Q ss_pred ---------------------CceeEEEECCCCCEEEEEeCCC-cEEEEEccC--CCc-----ceE--EEecCCCceEEE
Q 013282 319 ---------------------DFSFASAWHPNGVTFATGNQDK-TCRIWDLRN--LSE-----SVA--VLKGNLGAIRSI 367 (446)
Q Consensus 319 ---------------------~~v~~~~~~p~~~~l~sgs~d~-~v~iwd~~~--~~~-----~~~--~~~~~~~~v~~l 367 (446)
..+..++|+|+|+.|+++...+ .+..++... ... ... ...++.+....+
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 2357899999999998887766 444444321 000 000 122344456789
Q ss_pred EEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec-cccCeEEEEEcCCCCcEEEEEecC
Q 013282 368 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID-FFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 368 ~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~-~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
+++++|+++++...++.|.+||..+++....... ....+.+++|.++|.++++.....
T Consensus 254 a~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred EECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 9999999888888899999999856753322222 245689999999988766665443
No 211
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.35 E-value=2.1e-09 Score=98.96 Aligned_cols=219 Identities=14% Similarity=0.108 Sum_probs=139.1
Q ss_pred eEEecccCeEEEe--cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcE
Q 013282 136 LVWATSKHDVYLM--SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGEL 211 (446)
Q Consensus 136 l~~~~~~~~v~~~--~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i 211 (446)
.+|....+.+|++ ..+.|..|+..++... .+...+ .+.++++ +++++++ . ++.|
T Consensus 18 p~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~~~~-------------------~~~~i~~~~dG~l~v~-~-~~~l 75 (297)
T 3g4e_A 18 PVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-RVTMDA-------------------PVSSVALRQSGGYVAT-I-GTKF 75 (297)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTTCCEE-EEECSS-------------------CEEEEEEBTTSSEEEE-E-TTEE
T ss_pred CeEECCCCEEEEEECCCCEEEEEECCCCcEE-EEeCCC-------------------ceEEEEECCCCCEEEE-E-CCeE
Confidence 4455544555554 3567888988766432 222211 4777777 7775554 4 5679
Q ss_pred EEEEcCCCCeeeEEEEeec-CCCceeeEEEEeCCCCCeEEEEEeC-----------CCcEEEEecCcceeeEeeeCCCCe
Q 013282 212 ICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNN-----------DCGVRDFDMGKYQLSKHFRFPWPV 279 (446)
Q Consensus 212 ~vw~~~~~~~~~~~~~~~~-~~~~v~~i~~~~s~~~~~~l~s~s~-----------dg~v~iwd~~~~~~~~~~~~~~~v 279 (446)
.+|+..+............ ....++.+.+ +|+|. ++++... .+.|..++.. ++...........
T Consensus 76 ~~~d~~~g~~~~~~~~~~~~~~~~~~di~~--d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~p 151 (297)
T 3g4e_A 76 CALNWKEQSAVVLATVDNDKKNNRFNDGKV--DPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDIS 151 (297)
T ss_dssp EEEETTTTEEEEEEECCTTCSSEEEEEEEE--CTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBE
T ss_pred EEEECCCCcEEEEEecCCCCCCCCCCCEEE--CCCCC-EEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccc
Confidence 9999876543211111111 1223556666 99998 4443322 2334444443 4443333333456
Q ss_pred eEEEECCCCCEEEE-EecCCcEEEEEC--CCCce-----EEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCC
Q 013282 280 NHSSQSPDGKLLII-VGDNPDGLLVDS--MTGKT-----IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS 351 (446)
Q Consensus 280 ~~~~~sp~~~~l~~-~~~d~~i~i~d~--~~~~~-----~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~ 351 (446)
+.++|+|+++.|++ .+.++.|.+|++ .++.. ...+..+......+++.++|++.++....+.|..||..+ +
T Consensus 152 ngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~t-G 230 (297)
T 3g4e_A 152 NGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVT-G 230 (297)
T ss_dssp EEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTT-C
T ss_pred cceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCC-c
Confidence 89999999997754 456788999987 45543 222333446678999999999888887788999999954 7
Q ss_pred cceEEEecCCCceEEEEEc-cCCCEEEEEeC
Q 013282 352 ESVAVLKGNLGAIRSIRYT-SDGRYMATAEP 381 (446)
Q Consensus 352 ~~~~~~~~~~~~v~~l~~s-~dg~~l~~~~~ 381 (446)
+.+..+..+...+++++|. |+++.|+.++.
T Consensus 231 ~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 231 KRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp CEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred eEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 7788888776789999998 89887766654
No 212
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.34 E-value=1.2e-09 Score=103.14 Aligned_cols=249 Identities=12% Similarity=0.016 Sum_probs=158.4
Q ss_pred CeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec----------cCCcEEEEEcCCCC
Q 013282 151 FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG----------FQGELICKHLDRPG 220 (446)
Q Consensus 151 ~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~----------~dg~i~vw~~~~~~ 220 (446)
+.+.+.|..+.+....+... . .. . ..++++|++|+++. .++.|.+||..+..
T Consensus 59 ~~V~ViD~~t~~v~~~I~vG-~---------------~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~ 120 (386)
T 3sjl_D 59 TQQFVIDGEAGRVIGMIDGG-F---------------LP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLL 120 (386)
T ss_dssp EEEEEEETTTTEEEEEEEEC-S---------------SC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CEEEEEECCCCeEEEEEECC-C---------------CC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCe
Confidence 46788888777554444321 1 01 2 45556888887765 36789999998877
Q ss_pred eeeEEEEeecC----CCceeeEEEEeCCCCCeEEEEEeC-CCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEe
Q 013282 221 VSFCSRTTYDD----NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG 295 (446)
Q Consensus 221 ~~~~~~~~~~~----~~~v~~i~~~~s~~~~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 295 (446)
......+..+. ......+.+ +|+|+.++++... ++.|.++|+.+++.+.++..+.. ...+....+.+++.+
T Consensus 121 v~~~I~v~~g~r~~~g~~P~~~a~--spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~--~~~~P~g~~~~~~~~ 196 (386)
T 3sjl_D 121 PTADIELPDAPRFLVGTYPWMTSL--TPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDC--YHIFPTAPDTFFMHC 196 (386)
T ss_dssp EEEEEEETTCCCCCBSCCGGGEEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEE
T ss_pred EEEEEECCCccccccCCCCceEEE--cCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCc--ceeecCCCceeEEEC
Confidence 55333221101 112345666 9999964544433 78999999999999999875442 222322456777888
Q ss_pred cCCcEEEEECCC-CceEEEecCC----CCcee-EEEEC-CCCCEEEEEeCCCcEEEEEccCCC-cceEEEe---------
Q 013282 296 DNPDGLLVDSMT-GKTIASLCGH----LDFSF-ASAWH-PNGVTFATGNQDKTCRIWDLRNLS-ESVAVLK--------- 358 (446)
Q Consensus 296 ~d~~i~i~d~~~-~~~~~~~~~~----~~~v~-~~~~~-p~~~~l~sgs~d~~v~iwd~~~~~-~~~~~~~--------- 358 (446)
.||.+.+.++.+ ++.......+ ..+++ ..+|. ++|++++ .+.+|+|.+.|+.... ..+..+.
T Consensus 197 ~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~ 275 (386)
T 3sjl_D 197 RDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERAD 275 (386)
T ss_dssp TTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHT
T ss_pred CCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccc
Confidence 899999999875 6653322111 12232 24564 6776554 5568999999995422 1222221
Q ss_pred c-CCCceEEEEEccCCCEEEEEeC----------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCC-cEEEEEe
Q 013282 359 G-NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW 423 (446)
Q Consensus 359 ~-~~~~v~~l~~s~dg~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~ 423 (446)
+ ..+....++++|+++.|+.+.. .+.|.++|+.+++.+..+.- ..++.+|+|+||++ +|+++.+
T Consensus 276 g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~ 351 (386)
T 3sjl_D 276 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEKPLLYALST 351 (386)
T ss_dssp TEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSSCEEEEEET
T ss_pred cccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCCeEEEEEcC
Confidence 0 1123445788999998887653 25799999999988877653 34688999999997 6777654
No 213
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.33 E-value=6.9e-09 Score=98.72 Aligned_cols=245 Identities=12% Similarity=0.001 Sum_probs=156.0
Q ss_pred eeEEecccCeEEEec-----------CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEE
Q 013282 135 NLVWATSKHDVYLMS-----------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLV 203 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~-----------~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~ 203 (446)
.+.++.....+|.+. ++.|.++|..+.+....+.+.+... .... ....-..++++|++|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~--------~~~g-~~p~~~~~spDG~~l~ 140 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPR--------FDVG-PYSWMNANTPNNADLL 140 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccc--------cccC-CCccceEECCCCCEEE
Confidence 555666666777764 4568888887765544444431100 0000 0001234555999999
Q ss_pred Eecc--CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee------C
Q 013282 204 AGGF--QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR------F 275 (446)
Q Consensus 204 tg~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~------~ 275 (446)
++.. ++.|.++| .+...... .... . .++.+ .|.+...+++.+.||.+.+++. +++...... .
T Consensus 141 v~n~~~~~~v~viD-~t~~~~~~--~i~~-~---~~~~~--~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~ 210 (373)
T 2mad_H 141 FFQFAAGPAVGLVV-QGGSSDDQ--LLSS-P---TCYHI--HPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTA 210 (373)
T ss_pred EEecCCCCeEEEEE-CCCCEEeE--EcCC-C---ceEEE--EeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccC
Confidence 8874 47899999 77654321 0111 1 12333 5666656788889999999999 877663322 1
Q ss_pred CCCe-eEEEECCCCCEEEEEecCCcEEEEECCCCc--eEEEecC----------CCCceeEEEECCCCCEEEEEeC----
Q 013282 276 PWPV-NHSSQSPDGKLLIIVGDNPDGLLVDSMTGK--TIASLCG----------HLDFSFASAWHPNGVTFATGNQ---- 338 (446)
Q Consensus 276 ~~~v-~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~----------~~~~v~~~~~~p~~~~l~sgs~---- 338 (446)
..++ ....+.+++..++..+..+.+.+.|+.++. .+..+.- .......++++|+++.++++..
T Consensus 211 ~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~ 290 (373)
T 2mad_H 211 AQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSA 290 (373)
T ss_pred CcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCc
Confidence 1121 234566666666555578899999987553 2222211 1223445789999988887653
Q ss_pred ------CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCC-EEEEEe-CCCeEEEEEcCCCeeEeEee
Q 013282 339 ------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE-PADFVHVYDVKSGYEKEQEI 400 (446)
Q Consensus 339 ------d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~-~dg~i~iwd~~~~~~~~~~~ 400 (446)
.+.|.++|+.+ .+.+..+.. .....+++|+|||+ +++++. .++.|.+||+.+++.+..+.
T Consensus 291 ~~~~~~~~~V~VID~~t-~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i~ 358 (373)
T 2mad_H 291 WKLHAAAKEVTSVTGLV-GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTV 358 (373)
T ss_pred ccccCCCCeEEEEECCC-CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeeec
Confidence 35799999965 777777764 33578999999999 777776 58999999999998887743
No 214
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.31 E-value=9e-10 Score=105.81 Aligned_cols=253 Identities=11% Similarity=-0.018 Sum_probs=162.9
Q ss_pred CeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec----------cCCcEEEEEcCCCC
Q 013282 151 FSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG----------FQGELICKHLDRPG 220 (446)
Q Consensus 151 ~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~----------~dg~i~vw~~~~~~ 220 (446)
+.|.+.|..+.+....+..... +=..+++++++|+.+. .++.|.++|..+..
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~------------------Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFL------------------PHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSS------------------CEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CeEEEEECCCCEEEEEEECCCC------------------CceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 5678889888865554443210 2124455888777775 46789999998887
Q ss_pred eeeEEEEe-ecC---CCceeeEEEEeCCCCCeEEEEEeC-CCcEEEEecCcceeeEeeeCCCCeeEEEECCCC-CEEEEE
Q 013282 221 VSFCSRTT-YDD---NAITNAVEIYGSPSGAVHFTASNN-DCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDG-KLLIIV 294 (446)
Q Consensus 221 ~~~~~~~~-~~~---~~~v~~i~~~~s~~~~~~l~s~s~-dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~ 294 (446)
......+. ... ......+.+ +|+|+.++++... ++.|.++|+.+++.+..+..+.. ....|++ ..+++.
T Consensus 161 vv~~I~v~g~~r~~~g~~P~~~~~--spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~---~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 161 PIADIELPDAPRFLVGTYQWMNAL--TPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC---YHIFPASPTVFYMN 235 (426)
T ss_dssp EEEEEEETTCCCCCBSCCGGGSEE--CTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE---EEEEEEETTEEEEE
T ss_pred EEEEEECCCccccccCCCcceEEE--cCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc---eeeccCCCcEEEEE
Confidence 55333221 000 112345556 9999964444433 68899999999999988885432 3344543 556677
Q ss_pred ecCCcEEEEECCCCceEEE----ecCCCCce-eEEEECCCCCEEEEEeCCCcEEEEEccCCCc-ceEEEec---------
Q 013282 295 GDNPDGLLVDSMTGKTIAS----LCGHLDFS-FASAWHPNGVTFATGNQDKTCRIWDLRNLSE-SVAVLKG--------- 359 (446)
Q Consensus 295 ~~d~~i~i~d~~~~~~~~~----~~~~~~~v-~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~-~~~~~~~--------- 359 (446)
+.+|.+.+.++.+++.... +.....++ ..+.|.|++..++..+..++|.+.|+..... .+..+..
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 7888888888866665532 21112222 2357899988888888889999999854211 1111110
Q ss_pred -CCCceEEEEEccCCCEEEEEeC----------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCC-cEEEEEe-cCC
Q 013282 360 -NLGAIRSIRYTSDGRYMATAEP----------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTE-SLFIGVW-DRT 426 (446)
Q Consensus 360 -~~~~v~~l~~s~dg~~l~~~~~----------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~-D~~ 426 (446)
.......++++|+++.|+++.. .+.|.++|+.+.+.+..+.- .....+++|+|||+ +|+++.+ +++
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~v-g~~P~gia~spDg~~~lyv~n~~s~~ 394 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIEL-GHEIDSINVSQDAEPLLYALSAGTQT 394 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE-EEEECEEEECCSSSCEEEEEETTTTE
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEEC-CCCcCeEEEccCCCEEEEEEcCCCCe
Confidence 0112224789999987777642 35799999999988877753 33588999999999 8888875 444
Q ss_pred c
Q 013282 427 Y 427 (446)
Q Consensus 427 ~ 427 (446)
+
T Consensus 395 V 395 (426)
T 3c75_H 395 L 395 (426)
T ss_dssp E
T ss_pred E
Confidence 3
No 215
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.30 E-value=1.2e-12 Score=124.76 Aligned_cols=203 Identities=13% Similarity=0.114 Sum_probs=114.0
Q ss_pred eCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC
Q 013282 197 VKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP 276 (446)
Q Consensus 197 ~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~ 276 (446)
+++..+++|+.+|.|+.||..+++....... +.+.+..+ ..++. ++++++.||.|+.||..+++.+..+...
T Consensus 7 v~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~--~~~g~-~~v~~s~dg~l~a~d~~tG~~~w~~~~~ 78 (369)
T 2hz6_A 7 LPETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPT--HVEEP-AFLPDPNDGSLYTLGSKNNEGLTKLPFT 78 (369)
T ss_dssp -CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-------C-CEEECTTTCCEEEC-----CCSEECSCC
T ss_pred eeCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecce--EcCCC-EEEEeCCCCEEEEEECCCCceeeeeecc
Confidence 4788999999999999999988876644332 22222222 34554 5777789999999999998877665422
Q ss_pred C--Cee-EEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcc
Q 013282 277 W--PVN-HSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES 353 (446)
Q Consensus 277 ~--~v~-~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~ 353 (446)
. .+. ...+. .+..+++++.++.|+.||..+|+.+..+..+. ...++|++..+++++.++.|+.||.++ ++.
T Consensus 79 ~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~t-G~~ 152 (369)
T 2hz6_A 79 IPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKT-REL 152 (369)
T ss_dssp HHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSS-SSC
T ss_pred CccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCC-CCE
Confidence 1 111 11111 35567888889999999999999988776543 234567888999999999999999976 565
Q ss_pred eEEEecCCCceEEEEEccCC---CEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEE-EEEcCCCC
Q 013282 354 VAVLKGNLGAIRSIRYTSDG---RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISG-ISFSPDTE 416 (446)
Q Consensus 354 ~~~~~~~~~~v~~l~~s~dg---~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-~~~spdg~ 416 (446)
+..+..+ ......+.+++ ..+++++.+|.|+.||..+|+.+.+.. ..+++.. ..++++|.
T Consensus 153 ~W~~~~~--~~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 153 RWNATYF--DYAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREGL 216 (369)
T ss_dssp CCEEEEE--EECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSSC
T ss_pred EEeEecc--cccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCce
Confidence 5554322 12233444432 457778899999999999998776654 3444443 44556664
No 216
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.30 E-value=1.8e-09 Score=102.68 Aligned_cols=220 Identities=10% Similarity=0.056 Sum_probs=145.8
Q ss_pred CCcE-EEEeccCCcEEEEEcCCCC-eeeEEEEee------c-CCCceeeEEEEeCCCCCeEEEEEeCC------CcEEEE
Q 013282 198 KDKL-LVAGGFQGELICKHLDRPG-VSFCSRTTY------D-DNAITNAVEIYGSPSGAVHFTASNND------CGVRDF 262 (446)
Q Consensus 198 ~~~~-l~tg~~dg~i~vw~~~~~~-~~~~~~~~~------~-~~~~v~~i~~~~s~~~~~~l~s~s~d------g~v~iw 262 (446)
++++ +++|..++.|.|+|+.+.. .....++.. . .......+.+ .|+| +++++..+ |.|.++
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~--~pdG--i~Vs~~g~~~g~~~g~v~vl 169 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHC--GPDA--IYISALGNEEGEGPGGILML 169 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEE--CSSC--EEEEEEEETTSCSCCEEEEE
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeE--CCCe--EEEEcCCCcCCCCCCeEEEE
Confidence 3444 5566778899999986442 222223321 0 1111223334 7998 56666554 789999
Q ss_pred ecCcceeeEeeeCC-CC---eeEEEECCCCCEEEEEe-------------------cCCcEEEEECCCCceEEEecCC-C
Q 013282 263 DMGKYQLSKHFRFP-WP---VNHSSQSPDGKLLIIVG-------------------DNPDGLLVDSMTGKTIASLCGH-L 318 (446)
Q Consensus 263 d~~~~~~~~~~~~~-~~---v~~~~~sp~~~~l~~~~-------------------~d~~i~i~d~~~~~~~~~~~~~-~ 318 (446)
|..+++++..+... .+ -..+.|+|+++.+++.. ...+|.+||+.+++.+.++... .
T Consensus 170 D~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~ 249 (462)
T 2ece_A 170 DHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE 249 (462)
T ss_dssp CTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT
T ss_pred ECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCC
Confidence 99999999988722 11 23477899999888874 3689999999999888887642 1
Q ss_pred -CceeEEEE--CCCCCEEEEEe------CCCcEEEEEccCCCc--ceEEE--ecC----------------CCceEEEEE
Q 013282 319 -DFSFASAW--HPNGVTFATGN------QDKTCRIWDLRNLSE--SVAVL--KGN----------------LGAIRSIRY 369 (446)
Q Consensus 319 -~~v~~~~~--~p~~~~l~sgs------~d~~v~iwd~~~~~~--~~~~~--~~~----------------~~~v~~l~~ 369 (446)
.....+.| +|+++++++++ .+++|.+|.... +. ..+.+ ... ...+..|.+
T Consensus 250 g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~l 328 (462)
T 2ece_A 250 NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDI 328 (462)
T ss_dssp EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEE
T ss_pred CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccccccccccCCCceeEEEE
Confidence 23345555 99999988877 456887776643 22 11111 110 134678999
Q ss_pred ccCCCEEEEEeC-CCeEEEEEcCC---CeeEeEeecc--------------ccCeEEEEEcCCCCcEEEEE
Q 013282 370 TSDGRYMATAEP-ADFVHVYDVKS---GYEKEQEIDF--------------FGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 370 s~dg~~l~~~~~-dg~i~iwd~~~---~~~~~~~~~~--------------~~~v~~~~~spdg~~l~~~~ 422 (446)
||||++|+++.. .+.|.+||+.. .+.+..+.-. .+....+.++|||++|+++.
T Consensus 329 S~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 329 SLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999999988775 68999999863 3444443321 01368899999999999997
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.29 E-value=1.1e-08 Score=95.48 Aligned_cols=217 Identities=14% Similarity=0.093 Sum_probs=136.3
Q ss_pred eEEecccCeEEEec--CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEeccCCcE
Q 013282 136 LVWATSKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGFQGEL 211 (446)
Q Consensus 136 l~~~~~~~~v~~~~--~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~dg~i 211 (446)
..|......+|+.. ++.|..|+..+++... +...+ .+.++++ +++++++. .+| |
T Consensus 54 p~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~-~~~~~-------------------~v~~i~~~~dg~l~v~~-~~g-l 111 (326)
T 2ghs_A 54 PTFDPASGTAWWFNILERELHELHLASGRKTV-HALPF-------------------MGSALAKISDSKQLIAS-DDG-L 111 (326)
T ss_dssp EEEETTTTEEEEEEGGGTEEEEEETTTTEEEE-EECSS-------------------CEEEEEEEETTEEEEEE-TTE-E
T ss_pred CeEeCCCCEEEEEECCCCEEEEEECCCCcEEE-EECCC-------------------cceEEEEeCCCeEEEEE-CCC-E
Confidence 34554444444432 5678888876653322 22211 4677776 77766654 444 8
Q ss_pred EEEEcCCCCeeeEEEEeec--CCCceeeEEEEeCCCCCeEEEEEeC------CCcEEEEecCcceeeEeeeCCCCeeEEE
Q 013282 212 ICKHLDRPGVSFCSRTTYD--DNAITNAVEIYGSPSGAVHFTASNN------DCGVRDFDMGKYQLSKHFRFPWPVNHSS 283 (446)
Q Consensus 212 ~vw~~~~~~~~~~~~~~~~--~~~~v~~i~~~~s~~~~~~l~s~s~------dg~v~iwd~~~~~~~~~~~~~~~v~~~~ 283 (446)
.+|+..+...... ..... ....++.+.+ +|+|. ++++... .+.|..++ +++...........+.++
T Consensus 112 ~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~--d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~ 185 (326)
T 2ghs_A 112 FLRDTATGVLTLH-AELESDLPGNRSNDGRM--HPSGA-LWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSIC 185 (326)
T ss_dssp EEEETTTCCEEEE-ECSSTTCTTEEEEEEEE--CTTSC-EEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEE
T ss_pred EEEECCCCcEEEE-eeCCCCCCCCCCCCEEE--CCCCC-EEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeE
Confidence 9999876653211 11111 1124556655 99997 4444332 24566666 555444333334578999
Q ss_pred ECCCCCEEEEE-ecCCcEEEEECC--CC-c-----eEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcce
Q 013282 284 QSPDGKLLIIV-GDNPDGLLVDSM--TG-K-----TIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESV 354 (446)
Q Consensus 284 ~sp~~~~l~~~-~~d~~i~i~d~~--~~-~-----~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~ 354 (446)
|+|+++.++++ +.++.|.+|++. ++ + .+..+.........+++.++|+++++...++.|.+||. . ++.+
T Consensus 186 ~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~-g~~~ 263 (326)
T 2ghs_A 186 FSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-D-GNHI 263 (326)
T ss_dssp ECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-T-CCEE
T ss_pred EcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-C-CCEE
Confidence 99999977555 457899999986 55 3 22233334456788999999988877767788999998 4 5667
Q ss_pred EEEecCCCceEEEEEc-cCCCEEEEEeCC
Q 013282 355 AVLKGNLGAIRSIRYT-SDGRYMATAEPA 382 (446)
Q Consensus 355 ~~~~~~~~~v~~l~~s-~dg~~l~~~~~d 382 (446)
..+..+...+++++|+ |+++.|++++..
T Consensus 264 ~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 264 ARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp EEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred EEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 7777666679999998 898877665543
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.28 E-value=2.4e-09 Score=101.13 Aligned_cols=257 Identities=14% Similarity=0.062 Sum_probs=164.6
Q ss_pred eeEEecccCeEEEec-----------CCeEEEEecCCCCceEEEecCC-CCCCCCCCCCCccccCccceEEEEEeCCcEE
Q 013282 135 NLVWATSKHDVYLMS-----------HFSVIHWSSLTSSRSQVLNVSG-HVAPSEKHPGSLLEGFTQTQVSTLAVKDKLL 202 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~-----------~~~i~~w~~~~~~~~~~~~~~g-~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l 202 (446)
.+.++.....+|.+. ++.|.+||..+.+....+.+.+ .-.....+ ..-..++.+|++|
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~----------P~~~a~spDGk~l 151 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTY----------PWMTSLTPDGKTL 151 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCC----------GGGEEECTTSSEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCC----------CceEEEcCCCCEE
Confidence 366666677777764 4569999998887665555432 10000000 1234556699988
Q ss_pred EEecc--CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ceeeEeee-C---
Q 013282 203 VAGGF--QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFR-F--- 275 (446)
Q Consensus 203 ~tg~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~-~--- 275 (446)
+.+.. ++.|.++|+.+.+......+ . + +..+ .|.+...+++.+.||++.+.++.+ ++...... .
T Consensus 152 yVan~~~~~~VsVID~~t~~vv~tI~v-~---g---~~~~--~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~ 222 (386)
T 3sjl_D 152 LFYQFSPAPAVGVVDLEGKAFKRMLDV-P---D---CYHI--FPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHP 222 (386)
T ss_dssp EEEECSSSCEEEEEETTTTEEEEEEEC-C---S---EEEE--EEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSC
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEC-C---C---ccee--ecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecc
Confidence 88764 68999999988765432211 1 1 1112 244444577778899998888875 55533221 1
Q ss_pred -CCCee-EEEE-CCCCCEEEEEecCCcEEEEECCCCc--eEEEec---------C-CCCceeEEEECCCCCEEEEEeC--
Q 013282 276 -PWPVN-HSSQ-SPDGKLLIIVGDNPDGLLVDSMTGK--TIASLC---------G-HLDFSFASAWHPNGVTFATGNQ-- 338 (446)
Q Consensus 276 -~~~v~-~~~~-sp~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~---------~-~~~~v~~~~~~p~~~~l~sgs~-- 338 (446)
..++. ...| .++|++++ .+.+|.|++.|+.++. .+..+. + ..+....++++|+++.++....
T Consensus 223 ~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~ 301 (386)
T 3sjl_D 223 EDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQR 301 (386)
T ss_dssp TTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEEC
T ss_pred ccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccc
Confidence 12221 2355 35775444 6668999999997654 232221 1 1234456788999888887653
Q ss_pred --------CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCC-EEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEE
Q 013282 339 --------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISG 408 (446)
Q Consensus 339 --------d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 408 (446)
.++|.+.|+.+ .+.+..+... ..+.+|+++||++ +|+++. .++.|.++|..+++.+..+. ..+..+.
T Consensus 302 ~~~~hk~~~~~V~viD~~t-~kv~~~i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~-~~~~p~~ 378 (386)
T 3sjl_D 302 DEWRHKTASRFVVVLDAKT-GERLAKFEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN-QLGHGPQ 378 (386)
T ss_dssp CTTCTTSCEEEEEEEETTT-CCEEEEEEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC-CCCSSCC
T ss_pred cccccCCCCCEEEEEECCC-CeEEEEEECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec-CCCCCce
Confidence 24799999966 7777777642 3688999999997 666654 48999999999998777665 3455667
Q ss_pred EEEcCC
Q 013282 409 ISFSPD 414 (446)
Q Consensus 409 ~~~spd 414 (446)
|.+++|
T Consensus 379 l~~s~d 384 (386)
T 3sjl_D 379 VITTAD 384 (386)
T ss_dssp EEEECC
T ss_pred eEECCc
Confidence 788876
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.24 E-value=1.2e-09 Score=112.95 Aligned_cols=188 Identities=9% Similarity=-0.023 Sum_probs=129.3
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCC----CcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCC-----------
Q 013282 234 ITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP----------- 298 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~d----g~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----------- 298 (446)
.+..+.+ ||+|+.++++.+.. ..|++||+.+++.+...........++|+ |++.|+.++.+.
T Consensus 130 ~l~~~~~--SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 130 ALDQLSF--SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp EEEEEEE--CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEE--CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 3455555 99999766655443 46999999999865542221123578899 999999888764
Q ss_pred --cEEEEECCCCce----EEEecC-CCCceeEEEECCCCCEEEEEeC----CCcEEEEEccCCCcceEEEecCCCceEEE
Q 013282 299 --DGLLVDSMTGKT----IASLCG-HLDFSFASAWHPNGVTFATGNQ----DKTCRIWDLRNLSESVAVLKGNLGAIRSI 367 (446)
Q Consensus 299 --~i~i~d~~~~~~----~~~~~~-~~~~v~~~~~~p~~~~l~sgs~----d~~v~iwd~~~~~~~~~~~~~~~~~v~~l 367 (446)
.|++|++.+++. +..... |.....++.|+|+|++|+.... ...|.++|+.........+..+.......
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 399999987653 333333 4556788999999998865443 35899999966444566777766666555
Q ss_pred EEccCCCEEEEEeC----CCeEEEEEcCCCee--EeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 368 RYTSDGRYMATAEP----ADFVHVYDVKSGYE--KEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 368 ~~s~dg~~l~~~~~----dg~i~iwd~~~~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
|+++|..|+..+. .+.|.++++.++.. ...+..+...+. .|+|++++|+....+...
T Consensus 287 -~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~ 349 (693)
T 3iuj_A 287 -VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDAT 349 (693)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCe
Confidence 6777766655443 35799999988653 345666666555 899999998877665533
No 220
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=1.3e-08 Score=98.19 Aligned_cols=225 Identities=10% Similarity=0.035 Sum_probs=143.5
Q ss_pred ccCeEEEec--CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCC--cEEEEEc
Q 013282 141 SKHDVYLMS--HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQG--ELICKHL 216 (446)
Q Consensus 141 ~~~~v~~~~--~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg--~i~vw~~ 216 (446)
..+.+|.+. +..|..|+..++....+.... .... .++..+++.|+++..++ .|.+++.
T Consensus 140 ~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~-----------------~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 140 GNNTVLAYQRDDPRVRLISVDDNKVTTVHPGF-----------------KGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp STTEEEEEETTTTEEEEEETTTTEEEEEEETC-----------------CBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCCCEEEEecCCCcEEEEECCCCEEEEeeccC-----------------CCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 344466654 367888887666444333221 0012 33444888888888766 7888887
Q ss_pred CCCCeeeEEEEe-ecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEe----ee-CCCC--eeEEEECCC-
Q 013282 217 DRPGVSFCSRTT-YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH----FR-FPWP--VNHSSQSPD- 287 (446)
Q Consensus 217 ~~~~~~~~~~~~-~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~----~~-~~~~--v~~~~~sp~- 287 (446)
............ ......+..+.+ +|++.. |+.+..++.|+.||+.++..... .. .... ...++|+|+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav--~p~~g~-lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~ 278 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVAL--DETEEW-LYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVD 278 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEE--CTTSSE-EEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTT
T ss_pred CCCceeEEeeeccchhcCCcEEEEE--eCCCCe-EEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCC
Confidence 655432111111 213345667777 885554 44466788999999987654332 11 1111 239999995
Q ss_pred CCEEEEEecCCcEEEEECCCCceEEEecCCC---------------CceeEEEECCCCCEEEEEe-CCCcEEEEEccCCC
Q 013282 288 GKLLIIVGDNPDGLLVDSMTGKTIASLCGHL---------------DFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLS 351 (446)
Q Consensus 288 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---------------~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~ 351 (446)
+.++++-..++.|+.|+.... +..+.++. .....++++|+|+++++-+ .+++|+.|++.. +
T Consensus 279 g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~-G 355 (409)
T 3hrp_A 279 SNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD-G 355 (409)
T ss_dssp TEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT-T
T ss_pred CEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC-C
Confidence 555566667889999987643 33333332 3478899999999888877 889999999744 3
Q ss_pred cceEEEecC---------------CCceEEEEEccCCCEEEEEeCCCeEEEEEc
Q 013282 352 ESVAVLKGN---------------LGAIRSIRYTSDGRYMATAEPADFVHVYDV 390 (446)
Q Consensus 352 ~~~~~~~~~---------------~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~ 390 (446)
. +.++.++ -.....|+++|+|.++++-..++.|+.+.+
T Consensus 356 ~-v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 356 Y-VSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp E-EEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred E-EEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3 4555544 235789999999887777777888888765
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.21 E-value=8.9e-09 Score=95.14 Aligned_cols=188 Identities=9% Similarity=-0.003 Sum_probs=120.7
Q ss_pred eEEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-CCCceeeEEEEeCCCCCeEEEE----EeC--------
Q 013282 191 QVSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTA----SNN-------- 255 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-~~~~v~~i~~~~s~~~~~~l~s----~s~-------- 255 (446)
.+..+++ +|+++++...++.|.+|+.. +........... ....++.+.+ +++|. +.++ |..
T Consensus 87 ~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~--d~dG~-l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 87 FTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIV--ARDGA-IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEE--CTTSC-EEEECCSGGGSCGGGSCCC
T ss_pred ccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEE--CCCCC-EEEeCcCCCcccccccccc
Confidence 3667777 77766666666789999875 332211111111 1123456666 89987 4554 321
Q ss_pred -----CCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecC------CcEEEEECCCCceE--EEe-cCCCCce
Q 013282 256 -----DCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN------PDGLLVDSMTGKTI--ASL-CGHLDFS 321 (446)
Q Consensus 256 -----dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------~~i~i~d~~~~~~~--~~~-~~~~~~v 321 (446)
.+.|..|+..+++..... .....+.++|+|+++.|+++... +.|++|++..+... ..+ ....+..
T Consensus 163 ~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~p 241 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLP 241 (305)
T ss_dssp CCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCC
T ss_pred ccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCC
Confidence 356888888776654443 33456889999999988777654 68999998755411 111 1123445
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEE
Q 013282 322 FASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYD 389 (446)
Q Consensus 322 ~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd 389 (446)
..+++.++|++.+ ++.+ .|.+|+. . ++.+..+..+. .+.+++|+|+++.|+.++.++ +..++
T Consensus 242 dgi~~d~~G~lwv-~~~~-gv~~~~~-~-g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 242 DGFCVDRGGWLWS-SSGT-GVCVFDS-D-GQLLGHIPTPG-TASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CSEEECTTSCEEE-CCSS-EEEEECT-T-SCEEEEEECSS-CCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred CeEEECCCCCEEE-ecCC-cEEEECC-C-CCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 6789999999554 4445 4999998 3 56677776554 588999999999888888765 44433
No 222
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.20 E-value=3.5e-09 Score=109.49 Aligned_cols=222 Identities=16% Similarity=0.123 Sum_probs=142.4
Q ss_pred eEEEEEe--CCcEEEE-----eccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC------
Q 013282 191 QVSTLAV--KDKLLVA-----GGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC------ 257 (446)
Q Consensus 191 ~v~~l~~--~~~~l~t-----g~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg------ 257 (446)
.+..+++ +|++||. |+....|++||+.++..... .... .....+. |+ +|+. |+.++.+.
T Consensus 130 ~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--~~~~--~k~~~~~--Ws-Dg~~-l~y~~~~~~~~~~~ 201 (693)
T 3iuj_A 130 ALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--PLKD--VKFSGIS--WL-GNEG-FFYSSYDKPDGSEL 201 (693)
T ss_dssp EEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--EEEE--EESCCCE--EE-TTTE-EEEEESSCCC----
T ss_pred EEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--ccCC--ceeccEE--Ee-CCCE-EEEEEecCcccccc
Confidence 4555566 8998884 33446799999988764321 1111 0113444 48 8886 44444543
Q ss_pred -------cEEEEecCccee--eEeeeC----CCCeeEEEECCCCCEEEEEec----CCcEEEEECCCCc-eEEEecCCCC
Q 013282 258 -------GVRDFDMGKYQL--SKHFRF----PWPVNHSSQSPDGKLLIIVGD----NPDGLLVDSMTGK-TIASLCGHLD 319 (446)
Q Consensus 258 -------~v~iwd~~~~~~--~~~~~~----~~~v~~~~~sp~~~~l~~~~~----d~~i~i~d~~~~~-~~~~~~~~~~ 319 (446)
.|++|++.+... ...+.. +..+..+.|+|||++|+.... ...|+++|+.++. ....+..+..
T Consensus 202 ~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~ 281 (693)
T 3iuj_A 202 SARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD 281 (693)
T ss_dssp ---CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS
T ss_pred cccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC
Confidence 499999976542 222322 334678999999998865542 3589999998764 4555666666
Q ss_pred ceeEEEECCCCCEEEEEe-CC---CcEEEEEccCCCc-ceEEEecCCCceEEEEEccCCCEEEEEeCCC---eEEEEEcC
Q 013282 320 FSFASAWHPNGVTFATGN-QD---KTCRIWDLRNLSE-SVAVLKGNLGAIRSIRYTSDGRYMATAEPAD---FVHVYDVK 391 (446)
Q Consensus 320 ~v~~~~~~p~~~~l~sgs-~d---~~v~iwd~~~~~~-~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg---~i~iwd~~ 391 (446)
..... |+++|..|+..+ .+ +.|.++|+..... ..+.+..|...+. .|++++++|+....++ .|++|++.
T Consensus 282 ~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~ 358 (693)
T 3iuj_A 282 ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYE 358 (693)
T ss_dssp SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTT
T ss_pred ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECC
Confidence 65554 666666555444 33 5799999965321 2456666666664 8999999887766544 68999988
Q ss_pred CCeeEeEee-ccccCeEEEEEcCCCCcEEEEEec
Q 013282 392 SGYEKEQEI-DFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 392 ~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
.+. ...+. ...+.+..+.++|++..|+....+
T Consensus 359 g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 359 GKR-VREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp SCE-EEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred CCe-eEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 554 33332 344567788889999888766544
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.18 E-value=6.5e-09 Score=99.85 Aligned_cols=245 Identities=15% Similarity=0.070 Sum_probs=160.1
Q ss_pred eeEEecccCeEEEec-----------CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEE
Q 013282 135 NLVWATSKHDVYLMS-----------HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLV 203 (446)
Q Consensus 135 ~l~~~~~~~~v~~~~-----------~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~ 203 (446)
.+.++.....+|... ++.|.++|..+.+....+.+.+.... ..| ....-..++.+|++|+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~---~~g------~~P~~~~~spDGk~ly 192 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRF---LVG------TYQWMNALTPDNKNLL 192 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCC---CBS------CCGGGSEECTTSSEEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCcccc---ccC------CCcceEEEcCCCCEEE
Confidence 566666667777764 45788999988876655555311000 000 0001224556899988
Q ss_pred Eecc--CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEe----ee-CC
Q 013282 204 AGGF--QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH----FR-FP 276 (446)
Q Consensus 204 tg~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~----~~-~~ 276 (446)
.+.. ++.|.+.|+.+........+ . + +..+ .|.+...+++.+.||.+.+.++.+++.... +. ..
T Consensus 193 V~n~~~~~~VsVID~~t~kvv~~I~v--~--g---~~~~--~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~ 263 (426)
T 3c75_H 193 FYQFSPAPAVGVVDLEGKTFDRMLDV--P--D---CYHI--FPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTED 263 (426)
T ss_dssp EEECSSSCEEEEEETTTTEEEEEEEC--C--S---EEEE--EEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTT
T ss_pred EEecCCCCeEEEEECCCCeEEEEEEc--C--C---ceee--ccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCC
Confidence 8864 57899999988765432211 1 1 1222 455555677777888888888866665432 22 11
Q ss_pred CCe-eEEEECCCCCEEEEEecCCcEEEEECCCCceE--EEecC----------CCCceeEEEECCCCCEEEEEeC-----
Q 013282 277 WPV-NHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI--ASLCG----------HLDFSFASAWHPNGVTFATGNQ----- 338 (446)
Q Consensus 277 ~~v-~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~----------~~~~v~~~~~~p~~~~l~sgs~----- 338 (446)
.++ ..+.+.+++..++..+..+.+.+.|...+... ..+.- .......++++|+++.+++...
T Consensus 264 ~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~g 343 (426)
T 3c75_H 264 ELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEW 343 (426)
T ss_dssp SCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTT
T ss_pred CceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccc
Confidence 121 23567899998888888899999998755422 11110 1122234789999887777643
Q ss_pred -----CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCC-EEEEEe-CCCeEEEEEcCCCeeEeEe
Q 013282 339 -----DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE-PADFVHVYDVKSGYEKEQE 399 (446)
Q Consensus 339 -----d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~-~dg~i~iwd~~~~~~~~~~ 399 (446)
.++|.++|+.+ .+.+..+... ....+++|+|||+ +++++. .++.|.++|+.+++.+.++
T Consensus 344 thk~~s~~VsVID~~T-~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 344 KHKAASRFVVVLNAET-GERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp CTTSCEEEEEEEETTT-CCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred cccCCCCEEEEEECCC-CeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 35799999966 7777777642 2578999999999 888888 5899999999999988776
No 224
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.17 E-value=7.7e-09 Score=96.31 Aligned_cols=212 Identities=12% Similarity=0.041 Sum_probs=147.3
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCC
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPW 277 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~ 277 (446)
+..|..|+.+|.|..++.. +.... ........+.++.+ .+++. +..++.++.|..+|.. ++....+. ...
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~---~~~~~~~~~~~~~~--~~~g~--l~vgt~~~~l~~~d~~-g~~~~~~~~~~~ 177 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKW---RFKTKKAIYATPIV--SEDGT--IYVGSNDNYLYAINPD-GTEKWRFKTNDA 177 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEE---EEECSSCCCSCCEE--CTTSC--EEEECTTSEEEEECTT-SCEEEEEECSSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEE---EEcCCCceeeeeEE--cCCCE--EEEEcCCCEEEEECCC-CCEeEEEecCCC
Confidence 6678888889999999987 44332 22223344555554 66665 6667788999999998 77776666 344
Q ss_pred CeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEE
Q 013282 278 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 357 (446)
Q Consensus 278 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~ 357 (446)
.+.++.+.+++.+.+ ++ +.|..+| .+++.+..+......+.++...++|. |..++.++.+..+|. + +..+..+
T Consensus 178 ~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~-g~~~~~~ 250 (330)
T 3hxj_A 178 ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-D-GTEKWRF 250 (330)
T ss_dssp CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-T-SCEEEEE
T ss_pred ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-C-CCEeEEe
Confidence 567777777777444 44 7899999 78887777766666788888888875 555667778888875 3 5555555
Q ss_pred ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcce
Q 013282 358 KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYGS 429 (446)
Q Consensus 358 ~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~~ 429 (446)
......+.++.+.++|+ |..++.+|.|..+|. +++....+......+.++...++|. |++++.+|.+..
T Consensus 251 ~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~G~~~~ 319 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IYFGTRNGKFYA 319 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EEEECTTSCEEE
T ss_pred eCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EEEEcCCCeEEE
Confidence 55444455666776775 666788888999996 6766655554455677788878776 666777776543
No 225
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.17 E-value=1.2e-08 Score=91.28 Aligned_cols=186 Identities=11% Similarity=0.068 Sum_probs=129.9
Q ss_pred ceeeEEEEeCCCCCeEEEEEeC--CCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCCce
Q 013282 234 ITNAVEIYGSPSGAVHFTASNN--DCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTGKT 310 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~--dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~ 310 (446)
....+.+ ++++ .++++.+. ++.|+++|+.+++.+..+..+.......+.++++.|..+. .++.+.++|..+.+.
T Consensus 22 f~~Gl~~--~~dg-~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVY--AEND-TLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEE--CSTT-EEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEE--eCCC-eEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcE
Confidence 3567776 8876 34554443 6899999999999999887444333333334466665554 578999999999999
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCC-----CceEEEEEccCCCEEEEEeCCCeE
Q 013282 311 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL-----GAIRSIRYTSDGRYMATAEPADFV 385 (446)
Q Consensus 311 ~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~-----~~v~~l~~s~dg~~l~~~~~dg~i 385 (446)
+.++...... ...++++|+.++++..+++|.++|..+ .+.+..+.... ..++.+.|. +|+..+.....+.|
T Consensus 99 ~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t-~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 99 IKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHT-FKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred EEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCC-CcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 9988632121 233556787777777788999999965 56666655321 136678888 77555555567899
Q ss_pred EEEEcCCCeeEeEeeccc-------------cCeEEEEEcCCCCcEEEEEecCC
Q 013282 386 HVYDVKSGYEKEQEIDFF-------------GEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 386 ~iwd~~~~~~~~~~~~~~-------------~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
.+.|+.+++.+..+.-.. ...++|+|+|+++.|++++....
T Consensus 175 ~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~ 228 (266)
T 2iwa_A 175 ARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWP 228 (266)
T ss_dssp EEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCS
T ss_pred EEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCC
Confidence 999999998877765311 25689999999998888875443
No 226
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.15 E-value=1e-08 Score=90.68 Aligned_cols=185 Identities=12% Similarity=0.103 Sum_probs=132.8
Q ss_pred CCceeeEEEEeCCCCCeEEEEEeCCC--cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCCC
Q 013282 232 NAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMTG 308 (446)
Q Consensus 232 ~~~v~~i~~~~s~~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~ 308 (446)
...+..+.+ + ++ .++.+.+.+| .|+++|+.+++.+..+..+.......+.++++.|.... .++.+.+||..+.
T Consensus 42 ~~ftqGL~~--~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~ 117 (262)
T 3nol_A 42 KAFTEGFFY--R-NG-YFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNL 117 (262)
T ss_dssp TCEEEEEEE--E-TT-EEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTC
T ss_pred CcccceEEE--E-CC-EEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccC
Confidence 344567776 5 44 4677777766 89999999999999988666665554555566776555 5889999999999
Q ss_pred ceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecC--C---CceEEEEEccCCCEEEEEeCCC
Q 013282 309 KTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGN--L---GAIRSIRYTSDGRYMATAEPAD 383 (446)
Q Consensus 309 ~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~--~---~~v~~l~~s~dg~~l~~~~~dg 383 (446)
+.+.++..... -..++ ++++.|+.+..+++|.++|..+ .+.+..+... . ..++.+.|. +|+..+..-..+
T Consensus 118 ~~~~ti~~~~e-G~glt--~dg~~L~~SdGs~~i~~iDp~T-~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~ 192 (262)
T 3nol_A 118 RQVRSFNYDGE-GWGLT--HNDQYLIMSDGTPVLRFLDPES-LTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTN 192 (262)
T ss_dssp CEEEEEECSSC-CCCEE--ECSSCEEECCSSSEEEEECTTT-CSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSS
T ss_pred cEEEEEECCCC-ceEEe--cCCCEEEEECCCCeEEEEcCCC-CeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCC
Confidence 99999874322 23344 5677777766678899999965 5666665532 1 234557776 776555555688
Q ss_pred eEEEEEcCCCeeEeEeecc------------ccCeEEEEEcCCCCcEEEEEecC
Q 013282 384 FVHVYDVKSGYEKEQEIDF------------FGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 384 ~i~iwd~~~~~~~~~~~~~------------~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.|.+.|.++++.+..+.-. ..-.++|+|+|+++.|++++..-
T Consensus 193 ~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 193 KIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred eEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 9999999999887766531 13568999999999999887543
No 227
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.15 E-value=5.4e-09 Score=102.88 Aligned_cols=220 Identities=10% Similarity=0.039 Sum_probs=148.0
Q ss_pred CCcEEEEecc-CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeC-CCCCeEEEEE-----------------eCCCc
Q 013282 198 KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGS-PSGAVHFTAS-----------------NNDCG 258 (446)
Q Consensus 198 ~~~~l~tg~~-dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s-~~~~~~l~s~-----------------s~dg~ 258 (446)
+|++|..... ++.|.+.|+.+.+...... ... ......+.+. + |+++.+++++ -.++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-ip~-g~~phg~~~~-~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILE-IPN-AKGIHGLRPQ-KWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEE-CSS-CCSEEEEEEC-CSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEe-CCC-CCCCcceeee-ecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 7777776655 5569999998875432221 111 1224455542 4 8888654443 23568
Q ss_pred EEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCC--------------------------------------cE
Q 013282 259 VRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP--------------------------------------DG 300 (446)
Q Consensus 259 v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--------------------------------------~i 300 (446)
|.++|..+.+....+.-......++++|+|+++++.+.+. .|
T Consensus 177 vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 177 FTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 9999999999999888544678889999999998887543 47
Q ss_pred EEEECCC--Cce-EEEecCCCCceeEEEECCCCCEEEEEeC-CCcEEEEEccCCC-----------cceEEEecCCCceE
Q 013282 301 LLVDSMT--GKT-IASLCGHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLS-----------ESVAVLKGNLGAIR 365 (446)
Q Consensus 301 ~i~d~~~--~~~-~~~~~~~~~~v~~~~~~p~~~~l~sgs~-d~~v~iwd~~~~~-----------~~~~~~~~~~~~v~ 365 (446)
.+.|.++ ++. +..+... ....++.++|||+++++++. +.+|.++|+.+.. ..+..+.. .....
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~ 334 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPL 334 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEE
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcc
Confidence 7888877 555 4555432 24467899999998877664 7899999997421 12233332 33577
Q ss_pred EEEEccCCCEEEEEeCCCeEEEEEcCC----------CeeEeEeeccccCe-----EEEEEcCCCCcEEEEE
Q 013282 366 SIRYTSDGRYMATAEPADFVHVYDVKS----------GYEKEQEIDFFGEI-----SGISFSPDTESLFIGV 422 (446)
Q Consensus 366 ~l~~s~dg~~l~~~~~dg~i~iwd~~~----------~~~~~~~~~~~~~v-----~~~~~spdg~~l~~~~ 422 (446)
.++|+|+|....+...+++|.+||+.+ ...+..+.-|..+- .++.++|||++|+++.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~N 406 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLS 406 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEE
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcC
Confidence 999999994444566799999999987 34444544443321 2235689999999874
No 228
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.14 E-value=6.5e-08 Score=99.58 Aligned_cols=260 Identities=13% Similarity=0.086 Sum_probs=161.3
Q ss_pred CeEEEe-cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec------cCCcEEEEE
Q 013282 143 HDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG------FQGELICKH 215 (446)
Q Consensus 143 ~~v~~~-~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~------~dg~i~vw~ 215 (446)
..||.. .++.++.+|..+++..=......+.... ......++ ..++ .++.++ .+|.|+.||
T Consensus 122 g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~--------~~~~~sP~---v~~g-~v~vg~~~~~~~~~g~v~a~D 189 (689)
T 1yiq_A 122 GKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRS--------YTITGAPR---VVNG-KVVIGNGGAEFGVRGYVTAYD 189 (689)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSC--------CBCCSCCE---EETT-EEEECCBCTTTCCBCEEEEEE
T ss_pred CEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCC--------ccccCCcE---EECC-EEEEEeCCCccCCCCEEEEEE
Confidence 455554 4788999999888543222221000000 00011122 1244 444443 378999999
Q ss_pred cCCCCeeeEEEEeecCC----------------------------CceeeEEEEeCCCCCeEEEEEeCCC----------
Q 013282 216 LDRPGVSFCSRTTYDDN----------------------------AITNAVEIYGSPSGAVHFTASNNDC---------- 257 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~~~----------------------------~~v~~i~~~~s~~~~~~l~s~s~dg---------- 257 (446)
..+++............ .....+.+ +|.+. +++.++.++
T Consensus 190 ~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~--d~~~~-~vy~~~~~g~~w~~~~~~~ 266 (689)
T 1yiq_A 190 AETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAY--DPELN-LLYIGVGNGSLWDPKWRSQ 266 (689)
T ss_dssp TTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEE--ETTTT-EEEEECCCEESSCHHHHHT
T ss_pred CCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeE--cCCCC-EEEEeCCCCCccccCCCCC
Confidence 99888665443221100 00113334 67766 577776665
Q ss_pred ---------cEEEEecCcceeeEeeeCC----------CCeeEEEECCCCC---EEEEEecCCcEEEEECCCCceEEEec
Q 013282 258 ---------GVRDFDMGKYQLSKHFRFP----------WPVNHSSQSPDGK---LLIIVGDNPDGLLVDSMTGKTIASLC 315 (446)
Q Consensus 258 ---------~v~iwd~~~~~~~~~~~~~----------~~v~~~~~sp~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~ 315 (446)
.|..||..+++.+..++.. .++....+..+|+ .++.++.+|.++++|.++|+++....
T Consensus 267 ~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 346 (689)
T 1yiq_A 267 AKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKG 346 (689)
T ss_dssp TCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEecccc
Confidence 3999999999999888721 1122222223555 68888999999999999999875432
Q ss_pred CCC-C--------------------------------------ceeEEEECCCCCEEEEEeC------------------
Q 013282 316 GHL-D--------------------------------------FSFASAWHPNGVTFATGNQ------------------ 338 (446)
Q Consensus 316 ~~~-~--------------------------------------~v~~~~~~p~~~~l~sgs~------------------ 338 (446)
-.. . ....++|+|+..++++...
T Consensus 347 ~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~ 426 (689)
T 1yiq_A 347 IVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPF 426 (689)
T ss_dssp SSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSC
T ss_pred ccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeecccccccccc
Confidence 110 0 0123788898777776532
Q ss_pred ---------------------------CCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 339 ---------------------------DKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 339 ---------------------------d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
+|+|+.||+.+ ++.+..+..+. ++..-.+...+.++++|+.||.|+.||.+
T Consensus 427 ~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 427 KSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVK-QQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp TTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred ccccccCccccccCcccccCCCCCCCcceeEEEEECCC-CCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECC
Confidence 37799999965 77777766543 33334566678899999999999999999
Q ss_pred CCeeEeEeeccccC-eEEEEEcCCCCcEE
Q 013282 392 SGYEKEQEIDFFGE-ISGISFSPDTESLF 419 (446)
Q Consensus 392 ~~~~~~~~~~~~~~-v~~~~~spdg~~l~ 419 (446)
+|+.+.++....+. -.-+.|..+|+..+
T Consensus 505 tG~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 505 TGEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCccceeeeCCCCcccCceEEEECCEEEE
Confidence 99998877654332 23467788887433
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.13 E-value=1.8e-08 Score=103.45 Aligned_cols=262 Identities=12% Similarity=0.069 Sum_probs=165.6
Q ss_pred cCeEEE-ecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEecc------CCcEEEE
Q 013282 142 KHDVYL-MSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF------QGELICK 214 (446)
Q Consensus 142 ~~~v~~-~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~------dg~i~vw 214 (446)
...||. ..++.+..+|..+++..=......... .+ ......++ +.+..++.++. +|.|+.+
T Consensus 128 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~-----~~---~~~~~~p~----v~~~~v~v~~~~~~~~~~g~v~a~ 195 (677)
T 1kb0_A 128 KGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQK-----GS---LTITGAPR----VFKGKVIIGNGGAEYGVRGYITAY 195 (677)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEETTTTCC-----SS---CBCCSCCE----EETTEEEECCBCTTTCCBCEEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcC-----cC---cccccCcE----EECCEEEEEecccccCCCCEEEEE
Confidence 345555 447889999998885433332220000 00 00011112 23455555553 7999999
Q ss_pred EcCCCCeeeEEEEeecCC-----------------------------CceeeEEEEeCCCCCeEEEEEeCCC--------
Q 013282 215 HLDRPGVSFCSRTTYDDN-----------------------------AITNAVEIYGSPSGAVHFTASNNDC-------- 257 (446)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~-----------------------------~~v~~i~~~~s~~~~~~l~s~s~dg-------- 257 (446)
|..+++............ .....+.+ +|.+. +++.++.++
T Consensus 196 D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~--d~~~~-~vy~~~~~~~~w~~~~~ 272 (677)
T 1kb0_A 196 DAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTF--DAELN-TMYVGTGNGSPWSHKVR 272 (677)
T ss_dssp ETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEE--ETTTT-EEEEECCCEESSCHHHH
T ss_pred ECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeE--cCCCC-EEEEECCCCccccCCCC
Confidence 999888665443322110 00112333 77777 466655543
Q ss_pred -----------cEEEEecCcceeeEeeeCC----------CCeeEEEECCCC---CEEEEEecCCcEEEEECCCCceEEE
Q 013282 258 -----------GVRDFDMGKYQLSKHFRFP----------WPVNHSSQSPDG---KLLIIVGDNPDGLLVDSMTGKTIAS 313 (446)
Q Consensus 258 -----------~v~iwd~~~~~~~~~~~~~----------~~v~~~~~sp~~---~~l~~~~~d~~i~i~d~~~~~~~~~ 313 (446)
+|..+|..+++.+..++.. .....+....+| ..+++++.+|.++++|..+|+.+..
T Consensus 273 ~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~ 352 (677)
T 1kb0_A 273 SPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISA 352 (677)
T ss_dssp STTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEE
T ss_pred CccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecc
Confidence 5999999999999887721 112223333467 6788899999999999999998876
Q ss_pred ecCCC-C----------ce------------------------eEEEECCCCCEEEEEeCC-------------------
Q 013282 314 LCGHL-D----------FS------------------------FASAWHPNGVTFATGNQD------------------- 339 (446)
Q Consensus 314 ~~~~~-~----------~v------------------------~~~~~~p~~~~l~sgs~d------------------- 339 (446)
+.-.. . ++ ..++++|++.++++...+
T Consensus 353 ~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~ 432 (677)
T 1kb0_A 353 KNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPG 432 (677)
T ss_dssp EESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTT
T ss_pred ccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccc
Confidence 64211 0 01 156889988888776432
Q ss_pred ------------------------CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCee
Q 013282 340 ------------------------KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE 395 (446)
Q Consensus 340 ------------------------~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~ 395 (446)
+.|..||+.+ ++.+..+.. ..++....+...+..++.++.+|.+++||+++++.
T Consensus 433 ~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~t-G~~~W~~~~-~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 433 KPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVA-QKAAWSVEH-VSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp STTGGGTCCCCEEECSSCCCSCCEEEEEEEETTT-TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCE
T ss_pred ccccccccccccccccccCCCCCccEEEEEeCCC-CcEEeecCC-CCCCcCcceEeCCCEEEEECCCCcEEEEECCCCce
Confidence 7899999965 776666653 33445555677888899999999999999999999
Q ss_pred EeEeecccc-CeEEEEEcCCCCcEEE
Q 013282 396 KEQEIDFFG-EISGISFSPDTESLFI 420 (446)
Q Consensus 396 ~~~~~~~~~-~v~~~~~spdg~~l~~ 420 (446)
+..+....+ .-.-+.|.++|+.+++
T Consensus 511 lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 511 LWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp EEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred eeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 888764332 2234567788875543
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.12 E-value=4.9e-07 Score=81.54 Aligned_cols=216 Identities=12% Similarity=0.011 Sum_probs=136.6
Q ss_pred eEEEEEe--CC-cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV--KD-KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~--~~-~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
....+++ ++ .++++-...+.|.++++...... ............+.+ ++.+..++++....+.|.++++...
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~---~~~~~~~~~p~~ia~--d~~~~~lyv~d~~~~~I~~~~~~g~ 111 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT---TIIRQDLGSPEGIAL--DHLGRTIFWTDSQLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE---EEECTTCCCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE---EEEECCCCCccEEEE--EecCCeEEEEECCCCEEEEEEcCCC
Confidence 3566777 34 45556666789999998755322 222222234566766 7876666777677789999998654
Q ss_pred eeeEeeeC-CCCeeEEEECCCCCEEEEEec---CCcEEEEECCCCceEEEe-cCCCCceeEEEECCCCCEEEEEe-CCCc
Q 013282 268 QLSKHFRF-PWPVNHSSQSPDGKLLIIVGD---NPDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATGN-QDKT 341 (446)
Q Consensus 268 ~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~---d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~sgs-~d~~ 341 (446)
........ ......++++|++..|.++.. .+.|..+++... ....+ .........++++|++..|+.+. ..+.
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~ 190 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHR 190 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTE
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCE
Confidence 33222222 245789999997666655543 468888887633 22222 22334578899999876665554 5678
Q ss_pred EEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccc-cCeEEEEEcCCCC
Q 013282 342 CRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFF-GEISGISFSPDTE 416 (446)
Q Consensus 342 v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~-~~v~~~~~spdg~ 416 (446)
|.++|+.. ......+.. ......++.. +..|+.+. ..+.|.++|..+++.+..+.... ....++++.|++.
T Consensus 191 I~~~~~~g-~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 191 AECLNPAQ-PGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTE-EEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEecCC-CceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 99999853 332233332 2334566654 45555555 56899999999998777765332 2478899998865
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.08 E-value=1.8e-11 Score=116.62 Aligned_cols=169 Identities=12% Similarity=0.058 Sum_probs=94.9
Q ss_pred EEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCC-ceeE-EEE
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLD-FSFA-SAW 326 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-~v~~-~~~ 326 (446)
.+++++.||.|+.||..+++.+..+.. .++.+..+.+++..+++++.++.|+.||..+|+.+..+..+.. .+.+ ..+
T Consensus 11 ~v~~gs~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~ 89 (369)
T 2hz6_A 11 LLFVSTLDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCR 89 (369)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC
T ss_pred EEEEEcCCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceE
Confidence 688889999999999999999988886 5666666667787888888999999999999988766653321 1111 011
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCe
Q 013282 327 HPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEI 406 (446)
Q Consensus 327 ~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v 406 (446)
. .+..+++|+.++.|+.||.++ ++.+..+..+. ...++|++..|++++.++.|+.||.++|+.+..+.... .
T Consensus 90 ~-~~~~v~~g~~dg~v~a~D~~t-G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~--~ 161 (369)
T 2hz6_A 90 S-SDGILYMGKKQDIWYVIDLLT-GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD--Y 161 (369)
T ss_dssp ------CCCCEEEEEEEEECCC---------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE--E
T ss_pred e-cCCEEEEEeCCCEEEEEECCC-CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc--c
Confidence 1 345788888999999999976 67666665543 24567788899999999999999999997655443211 1
Q ss_pred EEEEEcCCC---CcEEEEEecCC
Q 013282 407 SGISFSPDT---ESLFIGVWDRT 426 (446)
Q Consensus 407 ~~~~~spdg---~~l~~~~~D~~ 426 (446)
...+++++. ..+++++.|+.
T Consensus 162 ~~~~~~~~~~~~~~v~~~~~dg~ 184 (369)
T 2hz6_A 162 AASLPEDDVDYKMSHFVSNGDGL 184 (369)
T ss_dssp CCBCCCCCTTCCCCEEEEETSCE
T ss_pred cCccccCCccccceEEEECCCCE
Confidence 223333332 45666655554
No 232
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=2.3e-08 Score=95.17 Aligned_cols=180 Identities=12% Similarity=0.106 Sum_probs=128.8
Q ss_pred CCCCeEEEEEeCCCcEEEEecCcc----eeeEeee-------CC-CCeeEEEECCCCCEEEEEecC------CcEEEEEC
Q 013282 244 PSGAVHFTASNNDCGVRDFDMGKY----QLSKHFR-------FP-WPVNHSSQSPDGKLLIIVGDN------PDGLLVDS 305 (446)
Q Consensus 244 ~~~~~~l~s~s~dg~v~iwd~~~~----~~~~~~~-------~~-~~v~~~~~sp~~~~l~~~~~d------~~i~i~d~ 305 (446)
++++.+++.+-.++.|+++|+.+. +....+. .. .....+.++|+| +++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 778888888889999999998754 6666662 11 134567788999 66666555 78999999
Q ss_pred CCCceEEEecCCC---CceeEEEECCCCCEEEEEe-------------------CCCcEEEEEccCCCcceEEEecC-C-
Q 013282 306 MTGKTIASLCGHL---DFSFASAWHPNGVTFATGN-------------------QDKTCRIWDLRNLSESVAVLKGN-L- 361 (446)
Q Consensus 306 ~~~~~~~~~~~~~---~~v~~~~~~p~~~~l~sgs-------------------~d~~v~iwd~~~~~~~~~~~~~~-~- 361 (446)
.+++.+.++.... ..-+.+.|+|+++.+++.. ...+|.+||+.. .+.++++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~-~k~~~tI~vg~~g 250 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK-RKRIHSLTLGEEN 250 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT-TEEEEEEESCTTE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCC-CcEeeEEecCCCC
Confidence 9999999886321 2345688999999999885 368999999975 6777777653 1
Q ss_pred CceEEEEE--ccCCCEEEEEe------CCCeEEEEEcCCCeeE--eEe--ecc----------------ccCeEEEEEcC
Q 013282 362 GAIRSIRY--TSDGRYMATAE------PADFVHVYDVKSGYEK--EQE--IDF----------------FGEISGISFSP 413 (446)
Q Consensus 362 ~~v~~l~~--s~dg~~l~~~~------~dg~i~iwd~~~~~~~--~~~--~~~----------------~~~v~~~~~sp 413 (446)
.....+.| +|+|+++++++ .+++|.+|....+... ..+ ... ...+..|.+||
T Consensus 251 ~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~ 330 (462)
T 2ece_A 251 RMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL 330 (462)
T ss_dssp EEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT
T ss_pred CccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECC
Confidence 24456656 99999888776 4568877765544311 110 100 23478899999
Q ss_pred CCCcEEEEEecC
Q 013282 414 DTESLFIGVWDR 425 (446)
Q Consensus 414 dg~~l~~~~~D~ 425 (446)
||++|+++.+..
T Consensus 331 DGrfLYVSnrg~ 342 (462)
T 2ece_A 331 DDKFLYLSLWGI 342 (462)
T ss_dssp TSCEEEEEETTT
T ss_pred CCCEEEEEeCCC
Confidence 999999987644
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.07 E-value=1.1e-08 Score=96.49 Aligned_cols=215 Identities=10% Similarity=-0.114 Sum_probs=130.9
Q ss_pred EEEEeccCC----cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEe---------CCCcEEEEecCcc
Q 013282 201 LLVAGGFQG----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN---------NDCGVRDFDMGKY 267 (446)
Q Consensus 201 ~l~tg~~dg----~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s---------~dg~v~iwd~~~~ 267 (446)
.+++-..++ .|.+.|..+.+... .+..+. .+ .+.+ +|+++.++++.+ .++.|.+||+.++
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~--~i~vG~-~P--~i~~--spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~ 106 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLG--HSLGAF-LS--LAVA--GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF 106 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEE--EEEECT-TC--EEEE--CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC
T ss_pred EEEECCccCCccceEEEEECCCCeEEE--EEeCCC-CC--ceEE--CCCCCEEEEEcccccccccCCCCCEEEEEECCCC
Confidence 344444444 78899998876553 222232 23 4555 999996555542 4789999999999
Q ss_pred eeeEeeeCC--------CCeeEEEECCCCCEEEEEec--CCcEEE--EECCCCceEEEecCC------------------
Q 013282 268 QLSKHFRFP--------WPVNHSSQSPDGKLLIIVGD--NPDGLL--VDSMTGKTIASLCGH------------------ 317 (446)
Q Consensus 268 ~~~~~~~~~--------~~v~~~~~sp~~~~l~~~~~--d~~i~i--~d~~~~~~~~~~~~~------------------ 317 (446)
+.+..+..+ .....++++|||++++++.. ...+.+ +|+.+ +..+...
T Consensus 107 ~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 107 LPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSC 183 (368)
T ss_dssp CEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCC
T ss_pred CEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcC
Confidence 999998733 24678999999999998864 457888 88865 2222110
Q ss_pred CCceeEEEE--------------------------CCCCCEEEEEeCCCcEEEEEccCCC-cceEEEec-------C---
Q 013282 318 LDFSFASAW--------------------------HPNGVTFATGNQDKTCRIWDLRNLS-ESVAVLKG-------N--- 360 (446)
Q Consensus 318 ~~~v~~~~~--------------------------~p~~~~l~sgs~d~~v~iwd~~~~~-~~~~~~~~-------~--- 360 (446)
.+.+..+.. .+++..++..+. +.|.+.|+.... +.+..+.. +
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~ 262 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFR 262 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEE
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccc
Confidence 000000000 223333333334 667777764211 11111110 0
Q ss_pred CCceEEEEEccCCCEEEEEeC-C--------CeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe--cCCc
Q 013282 361 LGAIRSIRYTSDGRYMATAEP-A--------DFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW--DRTY 427 (446)
Q Consensus 361 ~~~v~~l~~s~dg~~l~~~~~-d--------g~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~--D~~~ 427 (446)
......++++|+|+.++.+.. . +.+.++|+.+.+.+..+... ....+++|+|||++++++.. ++++
T Consensus 263 p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~V 339 (368)
T 1mda_H 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVL 339 (368)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEE
T ss_pred cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeE
Confidence 011222789999998887643 2 35779999999887776533 36889999999997666654 5554
No 234
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.07 E-value=5.5e-08 Score=99.92 Aligned_cols=226 Identities=12% Similarity=0.044 Sum_probs=149.9
Q ss_pred EEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC---CCceeeEEEEeCCCCCeEEEEEeC------CCcEEEEecC
Q 013282 195 LAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD---NAITNAVEIYGSPSGAVHFTASNN------DCGVRDFDMG 265 (446)
Q Consensus 195 l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~---~~~v~~i~~~~s~~~~~~l~s~s~------dg~v~iwd~~ 265 (446)
+++.+..|++++.+|.|..+|..+++........... ........+ .+. .+++++. ++.|+.||..
T Consensus 124 ~a~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v----~~~-~v~v~~~~~~~~~~g~v~a~D~~ 198 (677)
T 1kb0_A 124 VALWKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRV----FKG-KVIIGNGGAEYGVRGYITAYDAE 198 (677)
T ss_dssp CEEETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEE----ETT-EEEECCBCTTTCCBCEEEEEETT
T ss_pred ceEECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEE----ECC-EEEEEecccccCCCCEEEEEECC
Confidence 3446778889999999999999888766443321010 111112222 123 3444443 7999999999
Q ss_pred cceeeEeeeCCCC---------------------------------eeEEEECCCCCEEEEEecCC--------------
Q 013282 266 KYQLSKHFRFPWP---------------------------------VNHSSQSPDGKLLIIVGDNP-------------- 298 (446)
Q Consensus 266 ~~~~~~~~~~~~~---------------------------------v~~~~~sp~~~~l~~~~~d~-------------- 298 (446)
+++.+..+....+ ...++++|++.++++++.++
T Consensus 199 tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd 278 (677)
T 1kb0_A 199 TGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGD 278 (677)
T ss_dssp TCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCC
T ss_pred CCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCC
Confidence 9999988762111 13567888889888887664
Q ss_pred -----cEEEEECCCCceEEEecC--CC-------CceeEEEECCCC---CEEEEEeCCCcEEEEEccCCCcceEEEecCC
Q 013282 299 -----DGLLVDSMTGKTIASLCG--HL-------DFSFASAWHPNG---VTFATGNQDKTCRIWDLRNLSESVAVLKGNL 361 (446)
Q Consensus 299 -----~i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~p~~---~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~ 361 (446)
.|..+|..+|+.+..++. |. ....-+....+| ..++.++.+|.++++|.++ ++.+..+....
T Consensus 279 ~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~t-G~~l~~~~~~~ 357 (677)
T 1kb0_A 279 NLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTN-GKFISAKNFVP 357 (677)
T ss_dssp CTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSC
T ss_pred CeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCC-CCEeccccccc
Confidence 499999999999887763 21 111222333467 6899999999999999976 66665544211
Q ss_pred ----------C-ce------------------------EEEEEccCCCEEEEEeC-------------------------
Q 013282 362 ----------G-AI------------------------RSIRYTSDGRYMATAEP------------------------- 381 (446)
Q Consensus 362 ----------~-~v------------------------~~l~~s~dg~~l~~~~~------------------------- 381 (446)
+ ++ ..++|+|++.++++...
T Consensus 358 ~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 437 (677)
T 1kb0_A 358 VNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSG 437 (677)
T ss_dssp CSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGG
T ss_pred cCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccc
Confidence 0 01 15688999888877543
Q ss_pred ------------------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 382 ------------------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 382 ------------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
.|.|..||+.+++.+-+.. +..++.+..++..+..+++++.|+.+
T Consensus 438 ~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l 500 (677)
T 1kb0_A 438 TGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRL 500 (677)
T ss_dssp GTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEE
T ss_pred cccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcE
Confidence 2789999999998777665 33445555677777888877665543
No 235
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.06 E-value=1.2e-07 Score=90.17 Aligned_cols=254 Identities=13% Similarity=0.048 Sum_probs=157.5
Q ss_pred cCeEEEe-cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCC
Q 013282 142 KHDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 142 ~~~v~~~-~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
...||.. .++.+..+|..+++..-.....+... ......+..++.++.+|.|..+|..++.
T Consensus 103 ~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~------------------~~p~~~~~~v~v~~~~g~l~~~d~~tG~ 164 (376)
T 3q7m_A 103 GGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEAL------------------SRPVVSDGLVLIHTSNGQLQALNEADGA 164 (376)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEECSSCCC------------------SCCEEETTEEEEECTTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceE------------------cCCEEECCEEEEEcCCCeEEEEECCCCc
Confidence 3445554 46788899988886443333332211 0111236688888899999999998877
Q ss_pred eeeEEEEeecCC--CceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCe--------eEEEECC--CC
Q 013282 221 VSFCSRTTYDDN--AITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPV--------NHSSQSP--DG 288 (446)
Q Consensus 221 ~~~~~~~~~~~~--~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v--------~~~~~sp--~~ 288 (446)
............ .......+ . + . .++.++.++.|..+|..+++.+..+....+. ..+...| .+
T Consensus 165 ~~W~~~~~~~~~~~~~~~~~~~--~-~-~-~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~ 239 (376)
T 3q7m_A 165 VKWTVNLDMPSLSLRGESAPTT--A-F-G-AAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN 239 (376)
T ss_dssp EEEEEECCC-----CCCCCCEE--E-T-T-EEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET
T ss_pred EEEEEeCCCCceeecCCCCcEE--E-C-C-EEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC
Confidence 554322211100 00012222 1 2 3 4777888999999999999988877633211 0111222 35
Q ss_pred CEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec-CCCceEEE
Q 013282 289 KLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSI 367 (446)
Q Consensus 289 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~-~~~~v~~l 367 (446)
..+++++.++.+..+|..+|+.+..... .....+.. ++..++.++.++.|..+|..+ ++.+..... ....+...
T Consensus 240 ~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~~~l~~~~~~g~l~~~d~~t-G~~~w~~~~~~~~~~~~~ 314 (376)
T 3q7m_A 240 GVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DGNRIYLVDQNDRVMALTIDG-GVTLWTQSDLLHRLLTSP 314 (376)
T ss_dssp TEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ETTEEEEEETTCCEEEEETTT-CCEEEEECTTTTSCCCCC
T ss_pred CEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--ECCEEEEEcCCCeEEEEECCC-CcEEEeecccCCCcccCC
Confidence 6788888899999999999998876652 23344443 466788888899999999966 666555542 22223333
Q ss_pred EEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEE-EEEcCCCCcEEEEEecCCc
Q 013282 368 RYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISG-ISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 368 ~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~D~~~ 427 (446)
.. .+..|++++.+|.|+++|..+++.+.........+.. +... +..|++++.++.+
T Consensus 315 ~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~~~~~~~~~~~~~~~--~~~l~v~~~~G~l 371 (376)
T 3q7m_A 315 VL--YNGNLVVGDSEGYLHWINVEDGRFVAQQKVDSSGFQTEPVAA--DGKLLIQAKDGTV 371 (376)
T ss_dssp EE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCTTCBCSCCEEE--TTEEEEEBTTSCE
T ss_pred EE--ECCEEEEEeCCCeEEEEECCCCcEEEEEecCCCcceeCCEEE--CCEEEEEeCCCEE
Confidence 33 2457888999999999999999877666543333322 2222 4567778777654
No 236
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.05 E-value=3.7e-08 Score=87.04 Aligned_cols=182 Identities=12% Similarity=0.019 Sum_probs=130.6
Q ss_pred CCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEE-EecCCcEEEEECCCCce
Q 013282 232 NAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLII-VGDNPDGLLVDSMTGKT 310 (446)
Q Consensus 232 ~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~~~~ 310 (446)
...+..+.+ + +..++++.+.+|.|+++|+.+++.+..+ .+.......+.++++.|.. .-.++.+.+||..+.+.
T Consensus 54 ~~ftqGL~~--~--~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 54 NAFTQGLVF--H--QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp TCCEEEEEE--E--TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred ccccceEEE--E--CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 344567766 4 3557888889999999999999998888 6555555333444555544 44688999999999999
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec--CCC---ceEEEEEccCCCEEEEEeCCCeE
Q 013282 311 IASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG--NLG---AIRSIRYTSDGRYMATAEPADFV 385 (446)
Q Consensus 311 ~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~--~~~---~v~~l~~s~dg~~l~~~~~dg~i 385 (446)
+.++..... -..++ ++++.|+.+..+++|.++|..+ .+.+..+.. +.. .++.+.|. +|+..+.....+.|
T Consensus 129 ~~ti~~~~e-GwGLt--~Dg~~L~vSdGs~~l~~iDp~T-~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I 203 (268)
T 3nok_A 129 ERTTRYSGE-GWGLC--YWNGKLVRSDGGTMLTFHEPDG-FALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDV 203 (268)
T ss_dssp EEEEECSSC-CCCEE--EETTEEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEE
T ss_pred EEEEeCCCc-eeEEe--cCCCEEEEECCCCEEEEEcCCC-CeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeE
Confidence 999874322 23444 5677887777788999999965 566666653 221 34667776 77655555468899
Q ss_pred EEEEcCCCeeEeEeecc-------------ccCeEEEEEcCCCCcEEEEEe
Q 013282 386 HVYDVKSGYEKEQEIDF-------------FGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 386 ~iwd~~~~~~~~~~~~~-------------~~~v~~~~~spdg~~l~~~~~ 423 (446)
.+.|.++++.+..+.-. ..-.++|+|+|+++.|++.+.
T Consensus 204 ~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 204 LEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred EEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 99999999877666521 135799999999998888764
No 237
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=99.04 E-value=1.5e-07 Score=82.56 Aligned_cols=186 Identities=16% Similarity=0.138 Sum_probs=131.2
Q ss_pred cCCCceeeEEEEeCCCCCeEEEEEeCCC--cEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEE-ecCCcEEEEECC
Q 013282 230 DDNAITNAVEIYGSPSGAVHFTASNNDC--GVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIV-GDNPDGLLVDSM 306 (446)
Q Consensus 230 ~~~~~v~~i~~~~s~~~~~~l~s~s~dg--~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~ 306 (446)
.....+..+.+ ++ ..++.+.+..| .|+.+|+.+++.+..+..+.......+.+.++.|... -.++.+.+||..
T Consensus 18 d~~~ftqGL~~--~~--~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~ 93 (243)
T 3mbr_X 18 DTTAFTEGLFY--LR--GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLA 93 (243)
T ss_dssp CTTCCEEEEEE--ET--TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred CCccccccEEE--EC--CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECC
Confidence 33455677776 44 34666666654 8999999999999999866666555445556666554 468899999999
Q ss_pred CCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEecCC-----CceEEEEEccCCCEEEEEeC
Q 013282 307 TGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL-----GAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 307 ~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~-----~~v~~l~~s~dg~~l~~~~~ 381 (446)
+.+.+.++...... ..++ +++..|+.+..++.|.++|..+ .+.+..+.... ..++.+.|. +|+..+..-.
T Consensus 94 tl~~~~ti~~~~~G-wglt--~dg~~L~vSdgs~~l~~iDp~t-~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 94 TLTPRARFRYPGEG-WALT--SDDSHLYMSDGTAVIRKLDPDT-LQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp TTEEEEEEECSSCC-CEEE--ECSSCEEEECSSSEEEEECTTT-CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred cCcEEEEEeCCCCc-eEEe--eCCCEEEEECCCCeEEEEeCCC-CeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 99999998743322 3444 4666666666788999999966 56666655321 235566665 6765554446
Q ss_pred CCeEEEEEcCCCeeEeEeecc-------------ccCeEEEEEcCCCCcEEEEEec
Q 013282 382 ADFVHVYDVKSGYEKEQEIDF-------------FGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 382 dg~i~iwd~~~~~~~~~~~~~-------------~~~v~~~~~spdg~~l~~~~~D 424 (446)
...|.+.|.++++.+..+.-. ..-.++|+++|+++.|++.+.-
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~ 224 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR 224 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC
Confidence 789999999999887766521 1357899999999999888744
No 238
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.03 E-value=6.5e-07 Score=85.06 Aligned_cols=258 Identities=10% Similarity=0.033 Sum_probs=153.2
Q ss_pred CeEEEec-CCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCCCe
Q 013282 143 HDVYLMS-HFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRPGV 221 (446)
Q Consensus 143 ~~v~~~~-~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~ 221 (446)
..||... ++.+..+|..+++..=........... ..............+..+++++.+|.|..+|..++..
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWF--------SKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTV 125 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CC--------SCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccc--------cccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCE
Confidence 3444443 557788888777543223332110000 0000112334455778888899999999999988876
Q ss_pred eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCee------EEEECCCCCEEEEEe
Q 013282 222 SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVN------HSSQSPDGKLLIIVG 295 (446)
Q Consensus 222 ~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~------~~~~sp~~~~l~~~~ 295 (446)
...... .........+ .++ .+++++.++.|..+|..+++.+..+....++. .... .+..+++++
T Consensus 126 ~W~~~~---~~~~~~~p~~---~~~--~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~--~~~~v~~g~ 195 (376)
T 3q7m_A 126 AWQTKV---AGEALSRPVV---SDG--LVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTT--AFGAAVVGG 195 (376)
T ss_dssp EEEEEC---SSCCCSCCEE---ETT--EEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEE--ETTEEEECC
T ss_pred EEEEeC---CCceEcCCEE---ECC--EEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEE--ECCEEEEEc
Confidence 543322 1112222222 133 57778889999999999999988887544332 1222 245688888
Q ss_pred cCCcEEEEECCCCceEEEecCCCCc-------eeEEEECC--CCCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEE
Q 013282 296 DNPDGLLVDSMTGKTIASLCGHLDF-------SFASAWHP--NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRS 366 (446)
Q Consensus 296 ~d~~i~i~d~~~~~~~~~~~~~~~~-------v~~~~~~p--~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~ 366 (446)
.++.+..+|..+|+.+......... +..+.-.| .+..++.++.++.+..+|.++ ++.+..... .....
T Consensus 196 ~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~t-G~~~w~~~~--~~~~~ 272 (376)
T 3q7m_A 196 DNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRS-GQIMWKREL--GSVND 272 (376)
T ss_dssp TTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTT-CCEEEEECC--CCEEE
T ss_pred CCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCC-CcEEeeccC--CCCCC
Confidence 8999999999999988776532110 00011122 356778888899999999966 665555432 23444
Q ss_pred EEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc-ccCeEEEEEcCCCCcEEEEEecC
Q 013282 367 IRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 367 l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
+.. ++..|+.++.++.|..+|..+++.+...... ...+..+... +..|+++..++
T Consensus 273 ~~~--~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g 328 (376)
T 3q7m_A 273 FIV--DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEG 328 (376)
T ss_dssp EEE--ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTS
T ss_pred ceE--ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCC
Confidence 444 3567888888999999999999876655422 1222222222 34566665444
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.02 E-value=3.7e-08 Score=97.01 Aligned_cols=217 Identities=11% Similarity=-0.026 Sum_probs=148.7
Q ss_pred EEEeccCCcEEEEEcCCCCeeeEEEEeec------------------------------C------CCceeeEEEEe---
Q 013282 202 LVAGGFQGELICKHLDRPGVSFCSRTTYD------------------------------D------NAITNAVEIYG--- 242 (446)
Q Consensus 202 l~tg~~dg~i~vw~~~~~~~~~~~~~~~~------------------------------~------~~~v~~i~~~~--- 242 (446)
+.+||..|+|+|+-+.+.........+.. + .+......+.+
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh~~~s~t~g 97 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHHVHMSFTEG 97 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCCEEEEEETT
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCccccCCCCC
Confidence 67889999999998876654332222110 0 11122344422
Q ss_pred CCCCCeEEEEEeCCCcEEEEecCcceeeEeee--CCCCeeEEEE-C-CCCCEEEEEe------------------cCCcE
Q 013282 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR--FPWPVNHSSQ-S-PDGKLLIIVG------------------DNPDG 300 (446)
Q Consensus 243 s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~--~~~~v~~~~~-s-p~~~~l~~~~------------------~d~~i 300 (446)
.++|+.++++...+..|.+.|+.+.++...+. ....+..+++ + |+++++++++ .++.+
T Consensus 98 ~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~v 177 (595)
T 1fwx_A 98 KYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVF 177 (595)
T ss_dssp EEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEE
T ss_pred CcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceE
Confidence 23777777777777889999999999888555 3456888887 5 9999998885 24578
Q ss_pred EEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCC--------------------------------------cE
Q 013282 301 LLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDK--------------------------------------TC 342 (446)
Q Consensus 301 ~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~--------------------------------------~v 342 (446)
.++|..+.+.+.++.--. ....++++|+|+++++.+.+. .|
T Consensus 178 tvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V 256 (595)
T 1fwx_A 178 TAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGV 256 (595)
T ss_dssp EEEETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTE
T ss_pred EEEECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcE
Confidence 999999999888876322 346678999999999988653 36
Q ss_pred EEEEccCC-Ccc-eEEEecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCee-----------EeEeeccccCeEE
Q 013282 343 RIWDLRNL-SES-VAVLKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYE-----------KEQEIDFFGEISG 408 (446)
Q Consensus 343 ~iwd~~~~-~~~-~~~~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~-----------~~~~~~~~~~v~~ 408 (446)
.+.|.++. ++. +..+... ....++.++|||+++++++ .++.|.++|+.+.+. +............
T Consensus 257 ~VID~~~~~~~~~~~~Ipvg-~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h 335 (595)
T 1fwx_A 257 KVVDGRKEASSLFTRYIPIA-NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLH 335 (595)
T ss_dssp EEEECSGGGCCSSEEEEEEE-SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEE
T ss_pred EEEeCcccCCceeEEEEecC-CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcce
Confidence 77777541 123 4455432 2456899999999887766 578999999986531 2222233456889
Q ss_pred EEEcCCCCcEEEE
Q 013282 409 ISFSPDTESLFIG 421 (446)
Q Consensus 409 ~~~spdg~~l~~~ 421 (446)
++|+|+| ++++.
T Consensus 336 ~aF~~dG-~aY~t 347 (595)
T 1fwx_A 336 TAFDGRG-NAYTS 347 (595)
T ss_dssp EEECTTS-EEEEE
T ss_pred EEECCCC-eEEEE
Confidence 9999999 66654
No 240
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.01 E-value=1.1e-07 Score=89.77 Aligned_cols=235 Identities=7% Similarity=-0.144 Sum_probs=139.3
Q ss_pred eEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEec----------cCCcEEEEEcCCCCe
Q 013282 152 SVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGG----------FQGELICKHLDRPGV 221 (446)
Q Consensus 152 ~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~----------~dg~i~vw~~~~~~~ 221 (446)
.+.+.|..+.+....+..... +-..+++++++++.+. .++.|.+||+.+...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~------------------P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v 108 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFL------------------SLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP 108 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTT------------------CEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE
T ss_pred eEEEEECCCCeEEEEEeCCCC------------------CceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE
Confidence 667788888765544443210 2234455888887775 478899999998876
Q ss_pred eeEEEEeecC----CCceeeEEEEeCCCCCeEEEEEeC-CCcEEE--EecCcceeeEeeeCCCC--------eeEEEE--
Q 013282 222 SFCSRTTYDD----NAITNAVEIYGSPSGAVHFTASNN-DCGVRD--FDMGKYQLSKHFRFPWP--------VNHSSQ-- 284 (446)
Q Consensus 222 ~~~~~~~~~~----~~~v~~i~~~~s~~~~~~l~s~s~-dg~v~i--wd~~~~~~~~~~~~~~~--------v~~~~~-- 284 (446)
.......... ......+.+ +|+|+.++++... ...|.+ +|+.+ +..+..+.. -..+++
T Consensus 109 v~~I~v~~~~~~~~g~~P~~ia~--SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~ 183 (368)
T 1mda_H 109 IADIELPDAPRFSVGPRVHIIGN--CASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSC 183 (368)
T ss_dssp EEEEEETTSCSCCBSCCTTSEEE--CTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCC
T ss_pred EEEEECCCccccccCCCcceEEE--cCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcC
Confidence 5433221000 012345556 9999964444333 467888 99866 222221100 000111
Q ss_pred -----------------------------------CCCCCEEEEEecCCcEEEEECCCCc--eEEEecC----------C
Q 013282 285 -----------------------------------SPDGKLLIIVGDNPDGLLVDSMTGK--TIASLCG----------H 317 (446)
Q Consensus 285 -----------------------------------sp~~~~l~~~~~d~~i~i~d~~~~~--~~~~~~~----------~ 317 (446)
++++..++..+. +.+.+.|+.++. .+..+.- .
T Consensus 184 dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~ 262 (368)
T 1mda_H 184 PASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFR 262 (368)
T ss_dssp TTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEE
T ss_pred CCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccc
Confidence 233333333344 667777765432 2222210 0
Q ss_pred CCceeEEEECCCCCEEEEEeC-C--------CcEEEEEccCCCcceEEEecCCCceEEEEEccCCC-EEEEEe-CCCeEE
Q 013282 318 LDFSFASAWHPNGVTFATGNQ-D--------KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR-YMATAE-PADFVH 386 (446)
Q Consensus 318 ~~~v~~~~~~p~~~~l~sgs~-d--------~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~-~l~~~~-~dg~i~ 386 (446)
......++++|+++.++.+.. . +.+.++|+.+ .+.+..+.... ....++|+|||+ .+++.. .++.|.
T Consensus 263 p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t-~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~Vs 340 (368)
T 1mda_H 263 SAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASV-GQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLD 340 (368)
T ss_dssp ECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSS-CCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEE
T ss_pred cCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCC-CeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEE
Confidence 111222789999988887643 2 3566999976 67777776533 578999999998 455555 589999
Q ss_pred EEEcCCCeeEeEeeccccCeEEEEEcC
Q 013282 387 VYDVKSGYEKEQEIDFFGEISGISFSP 413 (446)
Q Consensus 387 iwd~~~~~~~~~~~~~~~~v~~~~~sp 413 (446)
++|+.+++.+.++.-. ....++++.+
T Consensus 341 VID~~t~kvv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 341 IYDAASDQDQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp EEESSSCEEEEECCCC-SCCCEEECCC
T ss_pred EEECCCCcEEEEEECC-CCCCEEEeec
Confidence 9999999888777643 3455666654
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.00 E-value=1e-07 Score=98.06 Aligned_cols=225 Identities=15% Similarity=0.089 Sum_probs=146.5
Q ss_pred EeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCC--Ccee-eEEEEeCCCCCeEEEEEe------CCCcEEEEecCc
Q 013282 196 AVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN--AITN-AVEIYGSPSGAVHFTASN------NDCGVRDFDMGK 266 (446)
Q Consensus 196 ~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~--~~v~-~i~~~~s~~~~~~l~s~s------~dg~v~iwd~~~ 266 (446)
++.+..|++++.+|.|..+|..+++............ ..+. +..+ .++ .+++++ .+|.|+.||..+
T Consensus 118 ~~~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v---~~g--~v~vg~~~~~~~~~g~v~a~D~~t 192 (689)
T 1yiq_A 118 AVWKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRV---VNG--KVVIGNGGAEFGVRGYVTAYDAET 192 (689)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEE---ETT--EEEECCBCTTTCCBCEEEEEETTT
T ss_pred EEECCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEE---ECC--EEEEEeCCCccCCCCEEEEEECCC
Confidence 3457788899999999999998888665443320111 1111 1111 133 244443 368999999999
Q ss_pred ceeeEeeeC-C-C------------------------------CeeEEEECCCCCEEEEEecCCc---------------
Q 013282 267 YQLSKHFRF-P-W------------------------------PVNHSSQSPDGKLLIIVGDNPD--------------- 299 (446)
Q Consensus 267 ~~~~~~~~~-~-~------------------------------~v~~~~~sp~~~~l~~~~~d~~--------------- 299 (446)
++.+..+.. + . ....++++|++.++++++.++.
T Consensus 193 G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~ 272 (689)
T 1yiq_A 193 GKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNL 272 (689)
T ss_dssp CCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCT
T ss_pred CcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCce
Confidence 999887752 1 0 0125778888899998887763
Q ss_pred ----EEEEECCCCceEEEecC--CC-------CceeEEEECCCCC---EEEEEeCCCcEEEEEccCCCcceEEEecCC--
Q 013282 300 ----GLLVDSMTGKTIASLCG--HL-------DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKGNL-- 361 (446)
Q Consensus 300 ----i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~p~~~---~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~-- 361 (446)
|..+|..+|+.+..++. |. ..........+|+ .++.++.+|.++++|.++ ++.+.......
T Consensus 273 y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~ 351 (689)
T 1yiq_A 273 FLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRAT-GELLSAKGIVPQS 351 (689)
T ss_dssp TTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCS
T ss_pred eeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCC-CCEeccccccccc
Confidence 99999999999888764 22 1111122223565 788999999999999966 66553221100
Q ss_pred -----------------------------------C--ceEEEEEccCCCEEEEEeC-----------------------
Q 013282 362 -----------------------------------G--AIRSIRYTSDGRYMATAEP----------------------- 381 (446)
Q Consensus 362 -----------------------------------~--~v~~l~~s~dg~~l~~~~~----------------------- 381 (446)
+ .-..++|+|+..+|++...
T Consensus 352 w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~ 431 (689)
T 1yiq_A 352 WTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQ 431 (689)
T ss_dssp SEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCC
T ss_pred cccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccc
Confidence 0 0113688998887776532
Q ss_pred ----------------------CCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 382 ----------------------ADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 382 ----------------------dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
+|.|+.||+.+++.+-+...+. ++.+-.++..+.++++++.|+.+
T Consensus 432 ~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l 498 (689)
T 1yiq_A 432 LGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRV 498 (689)
T ss_dssp CSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEE
T ss_pred cCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcE
Confidence 3779999999998887765443 33344566677888888766543
No 242
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.96 E-value=3.3e-07 Score=81.94 Aligned_cols=193 Identities=13% Similarity=0.044 Sum_probs=133.4
Q ss_pred EEEEEe--CCcEEEEecc--CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 192 VSTLAV--KDKLLVAGGF--QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
...|++ ++.++++.+. ++.|.++|+.++.......+ +.......+.+ . +..+.++.-.++.|.++|..++
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l--~~~~fgeGi~~--~--g~~lyv~t~~~~~v~viD~~t~ 96 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM--DDSYFGEGLTL--L--NEKLYQVVWLKNIGFIYDRRTL 96 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC--CTTCCEEEEEE--E--TTEEEEEETTCSEEEEEETTTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec--CCCcceEEEEE--e--CCEEEEEEecCCEEEEEECCCC
Confidence 345666 4555555443 57899999998876532221 22222233444 3 4556666677899999999999
Q ss_pred eeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-----CceeEEEECCCCCEEEEEeCCCcE
Q 013282 268 QLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-----DFSFASAWHPNGVTFATGNQDKTC 342 (446)
Q Consensus 268 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~sgs~d~~v 342 (446)
+.+..+... .-....++++|+.++++..++.|.++|..+.+.+..+.-.. ..++.+.|. +|..++....++.|
T Consensus 97 ~v~~~i~~g-~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V 174 (266)
T 2iwa_A 97 SNIKNFTHQ-MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCI 174 (266)
T ss_dssp EEEEEEECC-SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEE
T ss_pred cEEEEEECC-CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeE
Confidence 999998754 12234466788888777778999999999999888876321 246678888 67655555467899
Q ss_pred EEEEccCCCcceEEEecC-------------CCceEEEEEccCCCEEE-EEeCCCeEEEEEcCCC
Q 013282 343 RIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSDGRYMA-TAEPADFVHVYDVKSG 393 (446)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~s~dg~~l~-~~~~dg~i~iwd~~~~ 393 (446)
.+.|..+ ++.+..+... ....+.|+|+|+++.|+ ++...+.|.+.++...
T Consensus 175 ~vID~~t-g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 175 ARISAKD-GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEETTT-CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEECCC-CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 9999976 7777777632 12468999999987555 5556788888887653
No 243
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.93 E-value=7e-08 Score=89.71 Aligned_cols=213 Identities=10% Similarity=0.042 Sum_probs=136.9
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL 269 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~ 269 (446)
.+.++.. .+..|..|+.+ |..++. ++.... .............+ . ++ .+..++.++.|..+|.. ++.
T Consensus 61 ~~~~~~~~~~g~l~v~t~~--l~~~d~-~g~~~~---~~~~~~~~~~~~~~--~-~~--~l~v~t~~~~l~~~d~~-g~~ 128 (330)
T 3hxj_A 61 IECRPSIGKDGTIYFGSDK--VYAINP-DGTEKW---RFDTKKAIVSDFTI--F-ED--ILYVTSMDGHLYAINTD-GTE 128 (330)
T ss_dssp EEECCEETTTTEECCSSCE--EEEECC-CGGGGG---GSCC-----CCEEE--E-TT--EEEEECTTSEEEEECTT-SCE
T ss_pred cccceEEecCCcEEEecCc--EEEECC-CCcEEE---EEECCCCcccCceE--E-CC--EEEEEecCCEEEEEcCC-CCE
Confidence 3556666 35667777665 777775 332211 11111122233333 2 33 47778889999999998 777
Q ss_pred eEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 270 SKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 270 ~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
...+. ....+.++...+++. +++++.++.|..+|.. ++.+..+......+.++...+++.+++.. +.|..+| .
T Consensus 129 ~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~ 202 (330)
T 3hxj_A 129 KWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-P 202 (330)
T ss_dssp EEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-T
T ss_pred EEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-C
Confidence 66666 344466677777776 6667778999999998 88777776556677778888888755544 7799999 4
Q ss_pred CCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 349 NLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 349 ~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
+ +..+.........+.++...++|. |..++.++.|..+|. ++..+..+......+..+.+.++|. |++++.++
T Consensus 203 ~-g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~g 275 (330)
T 3hxj_A 203 D-GTEKWNFYAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDG 275 (330)
T ss_dssp T-SCEEEEECCSSCCCSCCEECTTSC-EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTC
T ss_pred C-CcEEEEEccCCcceeceEECCCCe-EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCC
Confidence 4 555555555556788889998886 455677788888874 5555555554444455566666654 55565553
No 244
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.92 E-value=1.8e-07 Score=82.69 Aligned_cols=180 Identities=8% Similarity=0.069 Sum_probs=125.5
Q ss_pred EEEEEe-CCcEEEEeccCC--cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV-KDKLLVAGGFQG--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~-~~~~l~tg~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.-.|.+ ++.++++.+.+| .|+++|+.+++....... .....-..+.+ .+..+.++.-.++.+.++|..+.+
T Consensus 45 tqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l--~~~~FgeGit~----~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 45 TEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIEL--GKRYFGEGISD----WKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEEC--CTTCCEEEEEE----ETTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEec--CCccceeEEEE----eCCEEEEEEeeCCEEEEEECccCc
Confidence 445556 677777777776 899999998876543322 21111223433 355566666678999999999999
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-----CceeEEEECCCCCEEEEEeCCCcEE
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-----DFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
.+.++..+. ....++++++.|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|.+++..-.+..|.
T Consensus 119 ~~~ti~~~~--eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~ 195 (262)
T 3nol_A 119 QVRSFNYDG--EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIV 195 (262)
T ss_dssp EEEEEECSS--CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEE
T ss_pred EEEEEECCC--CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEE
Confidence 999998543 223444677877777667889999999999888876421 334567776 676555554688999
Q ss_pred EEEccCCCcceEEEecC------------CCceEEEEEccCCCEEEEEeC
Q 013282 344 IWDLRNLSESVAVLKGN------------LGAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~------------~~~v~~l~~s~dg~~l~~~~~ 381 (446)
+.|.++ ++.+..+... ....+.|+|+|+++.|++.+.
T Consensus 196 vIDp~t-G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 196 RIDPET-GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EECTTT-CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EEECCC-CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 999966 7877777542 124689999999887777664
No 245
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.88 E-value=3.2e-06 Score=77.90 Aligned_cols=222 Identities=11% Similarity=0.055 Sum_probs=135.4
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC-CC-cEEEEecCcc
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN-DC-GVRDFDMGKY 267 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~-dg-~v~iwd~~~~ 267 (446)
...+++ +++++++-..++.|..|+.... .. ... ........+.+ .++|. ++++... ++ .|..++..++
T Consensus 34 pegia~~~~g~lyv~d~~~~~I~~~d~~g~-~~---~~~-~~~~~p~gia~--~~dG~-l~vad~~~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 34 LENLASAPDGTIFVTNHEVGEIVSITPDGN-QQ---IHA-TVEGKVSGLAF--TSNGD-LVATGWNADSIPVVSLVKSDG 105 (306)
T ss_dssp EEEEEECTTSCEEEEETTTTEEEEECTTCC-EE---EEE-ECSSEEEEEEE--CTTSC-EEEEEECTTSCEEEEEECTTS
T ss_pred cceEEECCCCCEEEEeCCCCeEEEECCCCc-eE---EEE-eCCCCceeEEE--cCCCc-EEEEeccCCcceEEEEcCCCC
Confidence 455666 6777777778899988887543 21 111 12235666766 89987 4544433 22 4777787777
Q ss_pred eeeEeeeC--CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCce-EEEec---------CCCCceeEEEECCCCCEEEE
Q 013282 268 QLSKHFRF--PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT-IASLC---------GHLDFSFASAWHPNGVTFAT 335 (446)
Q Consensus 268 ~~~~~~~~--~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~-~~~~~---------~~~~~v~~~~~~p~~~~l~s 335 (446)
+....... ......++..+++..+++-...+.|+.+|..+++. +.... ........+ +|+++.|+.
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv 183 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYV 183 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEE
Confidence 76544332 22344555555554445444688999999876532 21111 111234455 788876655
Q ss_pred Ee-CCCcEEEEEccCCCc--ceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEe--EeeccccCeEEEE
Q 013282 336 GN-QDKTCRIWDLRNLSE--SVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE--QEIDFFGEISGIS 410 (446)
Q Consensus 336 gs-~d~~v~iwd~~~~~~--~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~--~~~~~~~~v~~~~ 410 (446)
+. ..++|..+++...+. ....+.. ......++++++|+++++....+.|.+++.. ++... .+......+++++
T Consensus 184 ~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a 261 (306)
T 2p4o_A 184 SNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVA 261 (306)
T ss_dssp EETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEE
T ss_pred EeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEE
Confidence 54 577899999853122 1222221 1346678999999877766667889999975 54422 2222235689999
Q ss_pred Ec---CCCCcEEEEEecC
Q 013282 411 FS---PDTESLFIGVWDR 425 (446)
Q Consensus 411 ~s---pdg~~l~~~~~D~ 425 (446)
|. |+++.|+++...+
T Consensus 262 ~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 262 FGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp ECCSTTTTTEEEEEECTT
T ss_pred EecccCCCCEEEEECCCC
Confidence 99 8999999887654
No 246
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.87 E-value=1.4e-07 Score=88.64 Aligned_cols=195 Identities=8% Similarity=-0.004 Sum_probs=124.1
Q ss_pred eEEEEEe--CCcEEEEecc-----CCcEEEEEcCCCCeeeEEEEee---cCCCceeeEEEEeCCCCCeEEEEEe---CCC
Q 013282 191 QVSTLAV--KDKLLVAGGF-----QGELICKHLDRPGVSFCSRTTY---DDNAITNAVEIYGSPSGAVHFTASN---NDC 257 (446)
Q Consensus 191 ~v~~l~~--~~~~l~tg~~-----dg~i~vw~~~~~~~~~~~~~~~---~~~~~v~~i~~~~s~~~~~~l~s~s---~dg 257 (446)
.+..+++ +++++++-.. .+.|.+||+.++.......... .+....+.+.+ ++++..++++.+ .++
T Consensus 68 ~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~v--d~~~g~~yvtd~~~~~~~ 145 (343)
T 2qe8_A 68 TVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAV--DLIHNFVYISDPAPDDKA 145 (343)
T ss_dssp CEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEE--ETTTTEEEEEECCSGGGC
T ss_pred EeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEE--ecCCCEEEEEcCccCCCC
Confidence 5788888 5565555433 5789999997765332211110 11234566766 776555566655 678
Q ss_pred cEEEEecCcceeeEeeeC------------------------------CCCeeEEEECCCCCEEEEEecCC-cEEEEECC
Q 013282 258 GVRDFDMGKYQLSKHFRF------------------------------PWPVNHSSQSPDGKLLIIVGDNP-DGLLVDSM 306 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~------------------------------~~~v~~~~~sp~~~~l~~~~~d~-~i~i~d~~ 306 (446)
.|.+||+.+++..+.+.. ...++.++|+|+++.|+++...+ .++.++..
T Consensus 146 ~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~ 225 (343)
T 2qe8_A 146 ALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSA 225 (343)
T ss_dssp EEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHH
T ss_pred eEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHH
Confidence 999999988776554421 02368899999999888876655 55555532
Q ss_pred ---CCc-----eEE--EecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec-CCCceEEEEEccCCCE
Q 013282 307 ---TGK-----TIA--SLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-NLGAIRSIRYTSDGRY 375 (446)
Q Consensus 307 ---~~~-----~~~--~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~-~~~~v~~l~~s~dg~~ 375 (446)
.+. ... ...++.+....++++++|+++++...++.|.+||... ++....... +...+.+++|.++|++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~-G~~~~~~~~~~~~~p~~va~~~~g~l 304 (343)
T 2qe8_A 226 DLSNLQLTDAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSAD-RAYKLLVTDEKLSWTDSFNFGSDGYL 304 (343)
T ss_dssp HHTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTT-TEEEEEEECGGGSCEEEEEECTTSCE
T ss_pred HhcCCCCChhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCC-CCEEEEEECCceecCCeeEECCCCcE
Confidence 111 000 1113444567799999999999988899999999833 443222222 2446889999999988
Q ss_pred EEEEeCCCeEEEE
Q 013282 376 MATAEPADFVHVY 388 (446)
Q Consensus 376 l~~~~~dg~i~iw 388 (446)
+++.+..+.+.+|
T Consensus 305 ~v~~~~~~~~~~f 317 (343)
T 2qe8_A 305 YFDCNQLHHSAPL 317 (343)
T ss_dssp EEEECCGGGSGGG
T ss_pred EEEeCcccccccc
Confidence 8777655544444
No 247
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.86 E-value=4.2e-07 Score=80.35 Aligned_cols=178 Identities=11% Similarity=0.050 Sum_probs=126.3
Q ss_pred EEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee
Q 013282 192 VSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS 270 (446)
Q Consensus 192 v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~ 270 (446)
.-.|.+ ++.++++.+.+|.|+++|+.+++..... +.. ...-..+.+ .+..+.++.-.++.+.+||..+.+.+
T Consensus 57 tqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~-~~FgeGit~----~g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 57 TQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME--RLG-NIFAEGLAS----DGERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp EEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE--ECT-TCCEEEEEE----CSSCEEEEESSSCEEEEEETTTTEEE
T ss_pred cceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC-CcceeEEEE----eCCEEEEEEccCCEEEEEECCcCcEE
Confidence 456666 6677788888999999999988866433 222 212223433 34456666668899999999999999
Q ss_pred EeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-----CceeEEEECCCCCEEEEEeCCCcEEEE
Q 013282 271 KHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-----DFSFASAWHPNGVTFATGNQDKTCRIW 345 (446)
Q Consensus 271 ~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~sgs~d~~v~iw 345 (446)
.++.....-. .++++++.|+.+..++.|.++|..+.+.+..+.... ..++.+.|. +|.+++..-.+..|.+.
T Consensus 130 ~ti~~~~eGw--GLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vI 206 (268)
T 3nok_A 130 RTTRYSGEGW--GLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEI 206 (268)
T ss_dssp EEEECSSCCC--CEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEE
T ss_pred EEEeCCCcee--EEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEE
Confidence 9998543323 334678888888779999999999999888876321 245667776 77655555468899999
Q ss_pred EccCCCcceEEEecC-------------CCceEEEEEccCCCEEEEEe
Q 013282 346 DLRNLSESVAVLKGN-------------LGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 346 d~~~~~~~~~~~~~~-------------~~~v~~l~~s~dg~~l~~~~ 380 (446)
|.++ ++.+..+... ....+.|+|+|+++.|+..+
T Consensus 207 Dp~T-G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 207 DPAT-GTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp CTTT-CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred eCCC-CcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 9966 7777776532 13568999999876555544
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.85 E-value=3.7e-06 Score=75.73 Aligned_cols=217 Identities=7% Similarity=-0.015 Sum_probs=132.0
Q ss_pred cEEEEeccCCcEEEEEcCCCCeee--EEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC-C
Q 013282 200 KLLVAGGFQGELICKHLDRPGVSF--CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-P 276 (446)
Q Consensus 200 ~~l~tg~~dg~i~vw~~~~~~~~~--~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~ 276 (446)
.+|+.+.. +.|+.++++...... ..............+.+ ++.+..++++....+.|..+++.+......+.. .
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~--d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~ 78 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAF--DCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDL 78 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEE--ETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTC
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEE--ecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCC
Confidence 44555553 468888886543210 00111111123445555 887776677777788999999976654433332 2
Q ss_pred CCeeEEEECCCCCEEEEE-ecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC---CCcEEEEEccCCCc
Q 013282 277 WPVNHSSQSPDGKLLIIV-GDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ---DKTCRIWDLRNLSE 352 (446)
Q Consensus 277 ~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~---d~~v~iwd~~~~~~ 352 (446)
.....++++|++..|.++ ...+.|.++++........+.........++++|++..|+.+.. .+.|..+++. +.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d--g~ 156 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD--GT 156 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT--SC
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC--CC
Confidence 467899999976655544 55778999998644322222222245689999996555555443 3688888874 33
Q ss_pred ceEEEe-cCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEec
Q 013282 353 SVAVLK-GNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 353 ~~~~~~-~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D 424 (446)
....+. ........++++|++..|+.+. ..+.|.++|+...... .+........+++.. +..|+++.+.
T Consensus 157 ~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-~~~~~~~~P~gi~~d--~~~lyva~~~ 227 (267)
T 1npe_A 157 NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRR-KVLEGLQYPFAVTSY--GKNLYYTDWK 227 (267)
T ss_dssp CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEE-EEEECCCSEEEEEEE--TTEEEEEETT
T ss_pred CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceE-EEecCCCCceEEEEe--CCEEEEEECC
Confidence 333332 3334678999999887776555 4678999998754332 333233445677654 5677777554
No 249
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.81 E-value=1.5e-06 Score=89.12 Aligned_cols=261 Identities=14% Similarity=0.094 Sum_probs=156.3
Q ss_pred CeEEEe-cCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEecc------CCcEEEEE
Q 013282 143 HDVYLM-SHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGF------QGELICKH 215 (446)
Q Consensus 143 ~~v~~~-~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~------dg~i~vw~ 215 (446)
..||+. .++.+..+|..+++..=.......... ......++ +.+..++++.. +|.|..+|
T Consensus 118 ~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~---------~~~~~~P~----v~~~~v~vg~~~~~~~~~g~v~a~D 184 (668)
T 1kv9_A 118 DKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKP---------YSITGAPR----VVKGKVIIGNGGAEYGVRGFVSAYD 184 (668)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECSCTTSS---------CBCCSCCE----EETTEEEECCBCTTTCCBCEEEEEE
T ss_pred CEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCc---------ceecCCCE----EECCEEEEeCCCCCcCCCCEEEEEE
Confidence 445554 478899999988854322222211000 00011122 12345555543 58999999
Q ss_pred cCCCCeeeEEEEeecCC----------------------------CceeeEEEEeCCCCCeEEEEEeCCC----------
Q 013282 216 LDRPGVSFCSRTTYDDN----------------------------AITNAVEIYGSPSGAVHFTASNNDC---------- 257 (446)
Q Consensus 216 ~~~~~~~~~~~~~~~~~----------------------------~~v~~i~~~~s~~~~~~l~s~s~dg---------- 257 (446)
..+++............ .....+.+ .+.+. +++.++.++
T Consensus 185 ~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~--d~~~~-~vy~~~~~g~~w~~~~~~~ 261 (668)
T 1kv9_A 185 ADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAY--DPELD-LLYVGTGNGSPWNREVRSP 261 (668)
T ss_dssp TTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEE--ETTTT-EEEEECCCEESSCHHHHST
T ss_pred CCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEE--cCCCC-EEEEeCCCCCccccCCCCC
Confidence 99888765443321110 00112333 66666 566666655
Q ss_pred ---------cEEEEecCcceeeEeeeCC----------CCeeEEEECCCCC---EEEEEecCCcEEEEECCCCceEEEec
Q 013282 258 ---------GVRDFDMGKYQLSKHFRFP----------WPVNHSSQSPDGK---LLIIVGDNPDGLLVDSMTGKTIASLC 315 (446)
Q Consensus 258 ---------~v~iwd~~~~~~~~~~~~~----------~~v~~~~~sp~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~ 315 (446)
.|..+|+.+++.+..++.. .++....+..+|+ .+++++.+|.++++|..+|+.+....
T Consensus 262 ~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 262 GGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp TCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 4999999999999888721 2222233333665 68888999999999999999885433
Q ss_pred CCCC------------c------------------------eeEEEECCCCCEEEEEe----------------------
Q 013282 316 GHLD------------F------------------------SFASAWHPNGVTFATGN---------------------- 337 (446)
Q Consensus 316 ~~~~------------~------------------------v~~~~~~p~~~~l~sgs---------------------- 337 (446)
.... + -..++++|+..+++...
T Consensus 342 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~ 421 (668)
T 1kv9_A 342 FGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNT 421 (668)
T ss_dssp SSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCC
T ss_pred ccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccccccccc
Confidence 1110 0 01267788766655421
Q ss_pred --------------CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccc
Q 013282 338 --------------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFF 403 (446)
Q Consensus 338 --------------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~ 403 (446)
.+|.|..||+.+ ++.+.....+. ++....+...+.+|++++.++.|++||.++|+.+..+....
T Consensus 422 g~~~~~~~~~p~~~~~g~l~A~D~~t-G~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~ 499 (668)
T 1kv9_A 422 AAGFADATDVPAAVVSGALLAWDPVK-QKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQS 499 (668)
T ss_dssp SSCGGGCCCCCGGGCEEEEEEEETTT-TEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CccccccCCCCCCCccceEEEEeCCC-CcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCC
Confidence 247899999966 77666655432 33333445567789999999999999999999887776543
Q ss_pred cCe-EEEEEcCCCC-cEEEE
Q 013282 404 GEI-SGISFSPDTE-SLFIG 421 (446)
Q Consensus 404 ~~v-~~~~~spdg~-~l~~~ 421 (446)
+.. .-+.+..+|+ +++++
T Consensus 500 ~~~~~p~~~~~~G~~yva~~ 519 (668)
T 1kv9_A 500 GIVAAPMTFELAGRQYVAIM 519 (668)
T ss_dssp CCCSCCEEEEETTEEEEEEE
T ss_pred CcccCceEEEECCEEEEEEE
Confidence 211 2244455666 34444
No 250
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.80 E-value=2.6e-06 Score=74.61 Aligned_cols=180 Identities=13% Similarity=0.061 Sum_probs=124.1
Q ss_pred EEEEEe-CCcEEEEeccCC--cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV-KDKLLVAGGFQG--ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~-~~~~l~tg~~dg--~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
.-.|.+ ++.++.+.+..| .|+++|+.+++....... .....-..+.+ .+..+.+..-.++.+.++|..+.+
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l--~~~~fgeGi~~----~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEV--PPPYFGAGIVA----WRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEEC--CTTCCEEEEEE----ETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeC--CCCcceeEEEE----eCCEEEEEEeeCCEEEEEECCcCc
Confidence 556677 555666667654 899999998876543222 11111123433 245566666788999999999999
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCC-----CceeEEEECCCCCEEEEEeCCCcEE
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL-----DFSFASAWHPNGVTFATGNQDKTCR 343 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~-----~~v~~~~~~p~~~~l~sgs~d~~v~ 343 (446)
.+.++..+..-..+ .+++..|+++..++.|.++|..+.+.+.++.-.. ..++.+.|. +|+.++..-.+..|.
T Consensus 97 ~~~ti~~~~~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~ 173 (243)
T 3mbr_X 97 PRARFRYPGEGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIA 173 (243)
T ss_dssp EEEEEECSSCCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEE
T ss_pred EEEEEeCCCCceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEE
Confidence 99999954433344 4567777777778999999999999888876422 345667765 666555554578999
Q ss_pred EEEccCCCcceEEEecC-------------CCceEEEEEccCCCEEEEEeC
Q 013282 344 IWDLRNLSESVAVLKGN-------------LGAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~-------------~~~v~~l~~s~dg~~l~~~~~ 381 (446)
+.|.++ ++.+..+... ....+.|+++|+++.|+..+.
T Consensus 174 vIDp~t-G~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 174 RIDPAS-GKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EECTTT-CBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEECCC-CCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 999976 7777776521 125688999998877766653
No 251
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.79 E-value=3e-05 Score=73.91 Aligned_cols=244 Identities=9% Similarity=-0.029 Sum_probs=148.0
Q ss_pred cCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe---CCcEEEEeccCCcEEEEEcCC
Q 013282 142 KHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGELICKHLDR 218 (446)
Q Consensus 142 ~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~---~~~~l~tg~~dg~i~vw~~~~ 218 (446)
...++++....|...+........++... . ....+++ .+.++++-...+.|..+++..
T Consensus 87 ~~~l~~~~~~~I~~i~~~~~~~~~~~~~~-----------------~--~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g 147 (386)
T 3v65_B 87 EPVLLFANRIDIRQVLPHRSEYTLLLNNL-----------------E--NAIALDFHHRRELVFWSDVTLDRILRANLNG 147 (386)
T ss_dssp CCEEEEECBSCEEEECTTSCCCEEEECSC-----------------S--CEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cceeEeecCccceeeccCCCcEEEEecCC-----------------C--ccEEEEEecCCCeEEEEeCCCCcEEEEecCC
Confidence 44556666667777776555433332211 0 3567776 345566666778898888876
Q ss_pred CCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEe-c
Q 013282 219 PGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVG-D 296 (446)
Q Consensus 219 ~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~ 296 (446)
.... .+..........+++ .+.+..++++-...+.|.+.++........+. .-.....+++.|.+..|+.+. .
T Consensus 148 ~~~~---~~~~~~~~~p~glav--d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~ 222 (386)
T 3v65_B 148 SNVE---EVVSTGLESPGGLAV--DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWG 222 (386)
T ss_dssp CCEE---EEECSSCSCCCCEEE--ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECS
T ss_pred CCcE---EEEeCCCCCccEEEE--EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccC
Confidence 5422 222222233456666 66666566776777889999887544333333 334678999999776665554 3
Q ss_pred C-CcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCC
Q 013282 297 N-PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGR 374 (446)
Q Consensus 297 d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~ 374 (446)
. +.|..+++........+.........++|+|++..|+.+ +..+.|..+|+.. ......+.........|++ ..+.
T Consensus 223 ~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~~P~giav-~~~~ 300 (386)
T 3v65_B 223 NTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG-SHRKAVISQGLPHPFAITV-FEDS 300 (386)
T ss_dssp SSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS-CSCEEEECSSCSSEEEEEE-ETTE
T ss_pred CCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC-CeeEEEEECCCCCceEEEE-ECCE
Confidence 4 678888876443333333334557899999866555544 4567899999843 3333333333445678888 4455
Q ss_pred EEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEE
Q 013282 375 YMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 411 (446)
Q Consensus 375 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 411 (446)
.+++....+.|..++..+|.....+......+.+|++
T Consensus 301 ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 337 (386)
T 3v65_B 301 LYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 337 (386)
T ss_dssp EEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EEEeeCCCCeEEEEECCCCcceEEEccCCCCCceEEE
Confidence 5555567788999997777666665544344555544
No 252
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.78 E-value=4.9e-05 Score=71.30 Aligned_cols=213 Identities=9% Similarity=-0.042 Sum_probs=129.6
Q ss_pred EEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
...+++ ++.++++-...+.|..+++...... .+..........+++ .+.+..++++-...+.|.+.++....
T Consensus 75 ~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~---~~~~~~~~~p~glav--d~~~g~ly~~d~~~~~I~~~~~dG~~ 149 (349)
T 3v64_C 75 AIALDFHHRRELVFWSDVTLDRILRANLNGSNVE---EVVSTGLESPGGLAV--DWVHDKLYWTDSGTSRIEVANLDGAH 149 (349)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEEeccccEEEEEeccCCceEEEecCCCCce---EEEeCCCCCccEEEE--ecCCCeEEEEcCCCCeEEEEcCCCCc
Confidence 567776 3455556667788988888765432 122222233456666 66566566777777899999987544
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEe-cC-CcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcEEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVG-DN-PDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRI 344 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~-~d-~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~i 344 (446)
....+. .-.....+++.|.+..|..+. .. +.|..+++........+.........++|+|++..|+.+ +..+.|..
T Consensus 150 ~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~ 229 (349)
T 3v64_C 150 RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIER 229 (349)
T ss_dssp CEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEE
Confidence 333333 334578999999666555443 44 788888876433222222234457899999866655554 45678999
Q ss_pred EEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEE
Q 013282 345 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 411 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 411 (446)
+|+.. ......+.........|++ ..+..+++-...+.|..++..+|+....+......+.++++
T Consensus 230 ~~~dG-~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~v 294 (349)
T 3v64_C 230 ANLDG-SHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHT 294 (349)
T ss_dssp EETTS-CSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEEE
T ss_pred EeCCC-CceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEEE
Confidence 99843 3323333333445678888 34555555556788999997777665555443333444443
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.70 E-value=1.2e-05 Score=74.58 Aligned_cols=220 Identities=11% Similarity=-0.037 Sum_probs=132.5
Q ss_pred EEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-----------------CCCceeeEEEEeCC-CCCeEEEEE
Q 013282 194 TLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-----------------DNAITNAVEIYGSP-SGAVHFTAS 253 (446)
Q Consensus 194 ~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-----------------~~~~v~~i~~~~s~-~~~~~l~s~ 253 (446)
++++ ++++++++..++.|..|+........ ...... ....+..+.+ .+ ++. |+.+
T Consensus 23 ~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~--~~~~g~--l~v~ 97 (322)
T 2fp8_A 23 SFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISY--NLQNNQ--LYIV 97 (322)
T ss_dssp CEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE--ETTTTE--EEEE
T ss_pred EEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEE--cCCCCc--EEEE
Confidence 3445 66768888889999999876543221 111000 0012455655 76 553 4444
Q ss_pred eCCCcEEEEecCcceeeEeee-----CCCCeeEEEECC-CCCEEEEEec-----------------CCcEEEEECCCCce
Q 013282 254 NNDCGVRDFDMGKYQLSKHFR-----FPWPVNHSSQSP-DGKLLIIVGD-----------------NPDGLLVDSMTGKT 310 (446)
Q Consensus 254 s~dg~v~iwd~~~~~~~~~~~-----~~~~v~~~~~sp-~~~~l~~~~~-----------------d~~i~i~d~~~~~~ 310 (446)
...+.|..+|..+++...... .....+.+++.| +|++.++-.. .+.|..+|..+++.
T Consensus 98 d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 98 DCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp ETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred ECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 444558889987654322211 113478899999 9986666432 36788999877764
Q ss_pred EEEecCCCCceeEEEECCCCCEEEEE-eCCCcEEEEEccCCC-cceEEEecCCCceEEEEEccCCCEEEEEeC-------
Q 013282 311 IASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLS-ESVAVLKGNLGAIRSIRYTSDGRYMATAEP------- 381 (446)
Q Consensus 311 ~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~iwd~~~~~-~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~------- 381 (446)
...... ......++|+|+|+.|+.+ +..+.|.+|++.... .....+....+ ...+++.++|++.++...
T Consensus 178 ~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~ 255 (322)
T 2fp8_A 178 TLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSSEELDGNMH 255 (322)
T ss_dssp EEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEEEETTSSTT
T ss_pred EEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEecCccccccc
Confidence 333222 2344679999999866655 556889999985311 11222222233 788999999986665544
Q ss_pred ---CCeEEEEEcCCCeeEeEeecc----ccCeEEEEEcCCCCcEEEEEe
Q 013282 382 ---ADFVHVYDVKSGYEKEQEIDF----FGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 382 ---dg~i~iwd~~~~~~~~~~~~~----~~~v~~~~~spdg~~l~~~~~ 423 (446)
.+.|..+|.. ++.+..+... ...++++++. + ..|++++.
T Consensus 256 ~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~ 301 (322)
T 2fp8_A 256 GRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTL 301 (322)
T ss_dssp SCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECS
T ss_pred CCCccEEEEECCC-CCEEEEEECCCCCccccceEEEEe-C-CEEEEeec
Confidence 4678888864 6665555433 2357777773 4 45666643
No 254
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.69 E-value=1e-05 Score=81.25 Aligned_cols=167 Identities=17% Similarity=0.078 Sum_probs=107.4
Q ss_pred CcEEEEecCcceeeEeeeCCC-------CeeE---EEECCCCC---EEEEEecCCcEEEEECCCCceEEEecCCC-----
Q 013282 257 CGVRDFDMGKYQLSKHFRFPW-------PVNH---SSQSPDGK---LLIIVGDNPDGLLVDSMTGKTIASLCGHL----- 318 (446)
Q Consensus 257 g~v~iwd~~~~~~~~~~~~~~-------~v~~---~~~sp~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~----- 318 (446)
+.|..+|..+++.+..++... .+.. +...++|+ .++.++.+|.++++|..+|+.+..+.-..
T Consensus 272 ~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~ 351 (571)
T 2ad6_A 272 MTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVF 351 (571)
T ss_dssp TEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSE
T ss_pred EEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCcccc
Confidence 369999999999998887210 1111 22224674 56778889999999999999887654211
Q ss_pred --------Cce--------------------------eEEEECCCCCEEEEEe---------------------------
Q 013282 319 --------DFS--------------------------FASAWHPNGVTFATGN--------------------------- 337 (446)
Q Consensus 319 --------~~v--------------------------~~~~~~p~~~~l~sgs--------------------------- 337 (446)
.++ ..++++|+..+|++.+
T Consensus 352 ~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~ 431 (571)
T 2ad6_A 352 KKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAM 431 (571)
T ss_dssp EEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEE
T ss_pred ccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcccccccee
Confidence 111 2467888777776654
Q ss_pred ----------CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccC-e
Q 013282 338 ----------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGE-I 406 (446)
Q Consensus 338 ----------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~-v 406 (446)
.++.|..||+.+ ++.+..+... ..+.+..+...+..++.++.+|.|++||.++|+.+.++...... -
T Consensus 432 ~~~~~~~~~~~~g~l~a~D~~t-G~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~ 509 (571)
T 2ad6_A 432 YPGPNGPTKKEMGQIRAFDLTT-GKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIG 509 (571)
T ss_dssp EECTTSTTSCCCEEEEEECTTT-CCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred ccCccccCCCCCCeEEEEECCC-CCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEe
Confidence 247899999965 6666665432 22333333334567778999999999999999988777643321 1
Q ss_pred EEEEEcCCCCcEEEEEecCC
Q 013282 407 SGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 407 ~~~~~spdg~~l~~~~~D~~ 426 (446)
.-+.+..+|+.+ +++.++.
T Consensus 510 ~p~~~~~~G~~y-v~~~~G~ 528 (571)
T 2ad6_A 510 SPMTYSFKGKQY-IGSMYGV 528 (571)
T ss_dssp CCEEEEETTEEE-EEEEECC
T ss_pred eeEEEEECCEEE-EEEECCC
Confidence 224456777643 3444443
No 255
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.68 E-value=1.8e-05 Score=79.47 Aligned_cols=223 Identities=13% Similarity=0.061 Sum_probs=137.1
Q ss_pred EeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC-C-CceeeEEEEeCCCCCeEEEEEeC------CCcEEEEecCcc
Q 013282 196 AVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD-N-AITNAVEIYGSPSGAVHFTASNN------DCGVRDFDMGKY 267 (446)
Q Consensus 196 ~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~-~-~~v~~i~~~~s~~~~~~l~s~s~------dg~v~iwd~~~~ 267 (446)
++.+..++.++.+|.|..+|..+++........... . .......+ . ++ .+++++. ++.|+.+|..++
T Consensus 112 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v--~-~g--~v~vg~~~~~~~~~g~v~a~D~~tG 186 (571)
T 2ad6_A 112 AYGAGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV--A-KD--TVLMGCSGAELGVRGAVNAFDLKTG 186 (571)
T ss_dssp EEETTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--E-TT--EEEEECBCGGGTCCCEEEEEETTTC
T ss_pred EEECCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE--E-CC--EEEEEecCCccCCCCEEEEEECCCC
Confidence 345778888889999999999888766543322110 0 11111112 1 33 3455544 799999999999
Q ss_pred eeeEeeeCCCCe---------------------------------------eEEEECCCCCEEEEEecC-----------
Q 013282 268 QLSKHFRFPWPV---------------------------------------NHSSQSPDGKLLIIVGDN----------- 297 (446)
Q Consensus 268 ~~~~~~~~~~~v---------------------------------------~~~~~sp~~~~l~~~~~d----------- 297 (446)
+.+..+....+. ..+++.+....++.++.+
T Consensus 187 ~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~g 266 (571)
T 2ad6_A 187 ELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPG 266 (571)
T ss_dssp CEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCS
T ss_pred cEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCC
Confidence 999887732221 134566766677666532
Q ss_pred -----CcEEEEECCCCceEEEecC--CC--------CceeEEEECCCCC---EEEEEeCCCcEEEEEccCCCcceEEEec
Q 013282 298 -----PDGLLVDSMTGKTIASLCG--HL--------DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKG 359 (446)
Q Consensus 298 -----~~i~i~d~~~~~~~~~~~~--~~--------~~v~~~~~~p~~~---~l~sgs~d~~v~iwd~~~~~~~~~~~~~ 359 (446)
+.|..+|..+|+.+..++. |. .++. +...++|+ .++.++.+|.+.++|..+ ++.+.....
T Consensus 267 d~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~~w~~~~ 344 (571)
T 2ad6_A 267 DNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNREN-GNLIVAEKV 344 (571)
T ss_dssp CCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTT-CCEEEEEES
T ss_pred CceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCC-CCEEeeecc
Confidence 2599999999999887753 21 1221 22224674 677888999999999966 666555432
Q ss_pred CC-------------Cce--------------------------EEEEEccCCCEEEEEe--------------------
Q 013282 360 NL-------------GAI--------------------------RSIRYTSDGRYMATAE-------------------- 380 (446)
Q Consensus 360 ~~-------------~~v--------------------------~~l~~s~dg~~l~~~~-------------------- 380 (446)
.. .++ ..++++|+..+|++.+
T Consensus 345 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 424 (571)
T 2ad6_A 345 DPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFF 424 (571)
T ss_dssp STTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCcc
Confidence 11 111 2457888877776653
Q ss_pred -----------------CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 381 -----------------PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 381 -----------------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
.+|.|..||+.+++.+-+.... ..+.+..+...+..+++++.|+.
T Consensus 425 ~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~ 486 (571)
T 2ad6_A 425 VGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGY 486 (571)
T ss_dssp CCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSE
T ss_pred ccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCe
Confidence 3478999999999877665432 22222223334556666655543
No 256
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.67 E-value=1.6e-05 Score=70.63 Aligned_cols=193 Identities=8% Similarity=0.049 Sum_probs=128.1
Q ss_pred EeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC--CCeeEEEECCCCCEEEEEecCCcEEEEE
Q 013282 227 TTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP--WPVNHSSQSPDGKLLIIVGDNPDGLLVD 304 (446)
Q Consensus 227 ~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~d~~i~i~d 304 (446)
.+.+-...+..+++ .|++..++++...++.|...|+. ++.++.+... .....+++.+++.++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~--~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTW--SAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEE--ETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEE--eCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEE
Confidence 33444455777877 78877777778889999999997 8888887633 4678899998887666655678899998
Q ss_pred CCCCce---EEEec------CCCCceeEEEECCCCCEEEEEeCCCcEEEEEccC--CCcceEEEe-------cCCCceEE
Q 013282 305 SMTGKT---IASLC------GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN--LSESVAVLK-------GNLGAIRS 366 (446)
Q Consensus 305 ~~~~~~---~~~~~------~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~--~~~~~~~~~-------~~~~~v~~ 366 (446)
+..... +.... ........++|+|.++.|+++.......||.+.. ....+..+. .+...+.+
T Consensus 98 v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~ 177 (255)
T 3qqz_A 98 LTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSG 177 (255)
T ss_dssp ECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCE
T ss_pred cCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCcee
Confidence 764432 22221 1234568999999987777777655556666531 112233321 12345789
Q ss_pred EEEccCCC-EEEEEeCCCeEEEEEcCCCeeEeEeeccc---------cCeEEEEEcCCCCcEEEEEec
Q 013282 367 IRYTSDGR-YMATAEPADFVHVYDVKSGYEKEQEIDFF---------GEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 367 l~~s~dg~-~l~~~~~dg~i~iwd~~~~~~~~~~~~~~---------~~v~~~~~spdg~~l~~~~~D 424 (446)
++++|... +++.......|.++|.. |+.+..+.-.. ...-+|+|.|+|+ |++.+.-
T Consensus 178 l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIvsE~ 243 (255)
T 3qqz_A 178 AEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIVSEP 243 (255)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEEETT
T ss_pred EEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEEcCC
Confidence 99999654 55556667789999966 44443333221 2578999999997 6666543
No 257
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.66 E-value=5.8e-06 Score=84.74 Aligned_cols=224 Identities=16% Similarity=0.103 Sum_probs=141.4
Q ss_pred EeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC-CCcee-eEEEEeCCCCCeEEEEEeC------CCcEEEEecCcc
Q 013282 196 AVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD-NAITN-AVEIYGSPSGAVHFTASNN------DCGVRDFDMGKY 267 (446)
Q Consensus 196 ~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~-~~~v~-~i~~~~s~~~~~~l~s~s~------dg~v~iwd~~~~ 267 (446)
++.+..|+.++.+|.|..+|..+++........... ...+. ...+ .++ .++++.. +|.|+.+|..++
T Consensus 114 ~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v---~~~--~v~vg~~~~~~~~~g~v~a~D~~tG 188 (668)
T 1kv9_A 114 ALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKPYSITGAPRV---VKG--KVIIGNGGAEYGVRGFVSAYDADTG 188 (668)
T ss_dssp EEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSSCBCCSCCEE---ETT--EEEECCBCTTTCCBCEEEEEETTTC
T ss_pred EEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCcceecCCCEE---ECC--EEEEeCCCCCcCCCCEEEEEECCCC
Confidence 345678888899999999999988866543331110 01111 1111 133 3444432 589999999999
Q ss_pred eeeEeeeC-C-CC------------------------------eeEEEECCCCCEEEEEecCC-----------------
Q 013282 268 QLSKHFRF-P-WP------------------------------VNHSSQSPDGKLLIIVGDNP----------------- 298 (446)
Q Consensus 268 ~~~~~~~~-~-~~------------------------------v~~~~~sp~~~~l~~~~~d~----------------- 298 (446)
+.+..+.. + .+ ...+++.|+..++++++.++
T Consensus 189 ~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~ 268 (668)
T 1kv9_A 189 KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLY 268 (668)
T ss_dssp CEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTT
T ss_pred cEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCcee
Confidence 99988762 1 11 12467888888888887665
Q ss_pred --cEEEEECCCCceEEEecC--CC-------CceeEEEECCCCC---EEEEEeCCCcEEEEEccCCCcceEEEecCC---
Q 013282 299 --DGLLVDSMTGKTIASLCG--HL-------DFSFASAWHPNGV---TFATGNQDKTCRIWDLRNLSESVAVLKGNL--- 361 (446)
Q Consensus 299 --~i~i~d~~~~~~~~~~~~--~~-------~~v~~~~~~p~~~---~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~--- 361 (446)
.|..+|..+|+.+..++. |. .+.....+..+|+ .++.++.+|.+.++|..+ ++.+.......
T Consensus 269 ~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~l~~~~~~~~~w 347 (668)
T 1kv9_A 269 LSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTN-GKLISAEKFGKVTW 347 (668)
T ss_dssp TTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTT-CCEEEEEESSCCCS
T ss_pred eeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCC-CCEecccccccccc
Confidence 399999999999888763 22 2222223333665 688999999999999966 66553322111
Q ss_pred --------C-c------------------------eEEEEEccCCCEEEEEe----------------------------
Q 013282 362 --------G-A------------------------IRSIRYTSDGRYMATAE---------------------------- 380 (446)
Q Consensus 362 --------~-~------------------------v~~l~~s~dg~~l~~~~---------------------------- 380 (446)
+ + -..++++|+...++...
T Consensus 348 ~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 427 (668)
T 1kv9_A 348 AEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFAD 427 (668)
T ss_dssp EEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGG
T ss_pred ccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccc
Confidence 0 0 01267788776655421
Q ss_pred --------CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 381 --------PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 381 --------~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
.+|.|..||+.+++.+-+.... .++....+...+.+|++++.|+.
T Consensus 428 ~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~ 480 (668)
T 1kv9_A 428 ATDVPAAVVSGALLAWDPVKQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQ 480 (668)
T ss_dssp CCCCCGGGCEEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSE
T ss_pred cCCCCCCCccceEEEEeCCCCcEEEEccCC-CCCcCceeEeCCCEEEEECCccc
Confidence 2378999999999877665533 23333445556778888765554
No 258
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.65 E-value=8.8e-05 Score=77.77 Aligned_cols=219 Identities=10% Similarity=-0.026 Sum_probs=143.0
Q ss_pred cceEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe---ecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec
Q 013282 189 QTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM 264 (446)
Q Consensus 189 ~~~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~ 264 (446)
...|.++.. ....|..|+.++.|..++............. .-....|.++.. .++|. |-.|+.++.|..|+.
T Consensus 309 ~~~i~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~--d~~g~--lWiGt~~~Gl~~~~~ 384 (795)
T 4a2l_A 309 QRSVRSIFMDSQGGMWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVE--DKDKN--LWIGTNDGGLNLYNP 384 (795)
T ss_dssp SSCEEEEEECTTSCEEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEE--CTTSC--EEEEESSSCEEEECT
T ss_pred CCcEEEEEEeCCcCEEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEE--CCCCC--EEEEECCCCeEEEcC
Confidence 346889888 4456777888778988887554322110000 001234666655 77775 666778888999998
Q ss_pred CcceeeEeee---------CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec----CCCCceeEEEECCCCC
Q 013282 265 GKYQLSKHFR---------FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC----GHLDFSFASAWHPNGV 331 (446)
Q Consensus 265 ~~~~~~~~~~---------~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~----~~~~~v~~~~~~p~~~ 331 (446)
.+++...... ....|.++...++++.|.+|+.++-|.++|..+++...... .....|.++...++|.
T Consensus 385 ~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~ 464 (795)
T 4a2l_A 385 ITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN 464 (795)
T ss_dssp TTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC
T ss_pred CCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC
Confidence 8765543321 13568899888888867778887789999998876543321 1345789999988887
Q ss_pred EEEEEeCCCcEEEEEccCCCcceEEEec-------CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEee----
Q 013282 332 TFATGNQDKTCRIWDLRNLSESVAVLKG-------NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI---- 400 (446)
Q Consensus 332 ~l~sgs~d~~v~iwd~~~~~~~~~~~~~-------~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~---- 400 (446)
+.+.. .. -+.+||... ++ ...+.. ....|.++...++|++.+. +..| |..||..++.. .+.
T Consensus 465 lwigt-~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWig-t~~G-l~~~~~~~~~~--~~~~~~~ 536 (795)
T 4a2l_A 465 LWLGT-LS-ALVRFNPEQ-RS-FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIG-GEEG-LSVFKQEGLDI--QKASILP 536 (795)
T ss_dssp EEEEE-SS-CEEEEETTT-TE-EEECCBCTTCCBCCCCCEEEEEECTTCCEEEE-ESSC-EEEEEEETTEE--EECCCSC
T ss_pred EEEEe-cC-ceeEEeCCC-Ce-EEEccccccccccCCceEEEEEECCCCCEEEE-eCCc-eEEEeCCCCeE--EEecCCC
Confidence 55544 44 488899854 32 222221 2357899999999986654 4444 88999887654 222
Q ss_pred ---ccccCeEEEEEcCCCCcEE
Q 013282 401 ---DFFGEISGISFSPDTESLF 419 (446)
Q Consensus 401 ---~~~~~v~~~~~spdg~~l~ 419 (446)
.....|.++...++|...+
T Consensus 537 ~~~l~~~~i~~i~~d~~g~lWi 558 (795)
T 4a2l_A 537 VSNVTKLFTNCIYEASNGIIWV 558 (795)
T ss_dssp SCGGGGSCEEEEEECTTSCEEE
T ss_pred CCCCCCCeeEEEEECCCCCEEE
Confidence 1234688999999888554
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.63 E-value=0.00024 Score=74.41 Aligned_cols=218 Identities=11% Similarity=0.038 Sum_probs=142.5
Q ss_pred ceEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-------CCCceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 190 TQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-------DNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 190 ~~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-------~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
..|.++.. ....|..|+.. .|.+|+..+.... ..... ....|.++.. .++|. |-.|+.++.|..
T Consensus 263 ~~i~~i~~d~~g~lWigt~~-Gl~~~~~~~~~~~---~~~~~~~~~~~l~~~~i~~i~~--D~~g~--lWigt~~~Gl~~ 334 (795)
T 4a2l_A 263 NYIRSLAMDSQNRLWIGTFN-DLNIYHEGTDSFA---SYSSNPVENGSLSQRSVRSIFM--DSQGG--MWLGTYFGGLNY 334 (795)
T ss_dssp SBEEEEEECTTSCEEEEESS-CEEEEETTTTEEE---EECCCTTSTTSCSSSCEEEEEE--CTTSC--EEEEESSSCEEE
T ss_pred CeEEEEEEcCCCCEEEEeCC-hhheEcCCCCeEE---EEecCCCCCCCCCCCcEEEEEE--eCCcC--EEEEECCCCeEE
Confidence 36889888 34556666666 4888887655322 22111 1234666655 77775 666778888999
Q ss_pred EecCcceeeEeee-------CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecC--------CCCceeEEEE
Q 013282 262 FDMGKYQLSKHFR-------FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCG--------HLDFSFASAW 326 (446)
Q Consensus 262 wd~~~~~~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------~~~~v~~~~~ 326 (446)
|+..+........ ....|.++...++|+ |.+|+.++-|..|+..+++....... ....|.+++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~ 413 (795)
T 4a2l_A 335 YHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYV 413 (795)
T ss_dssp ECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEE
T ss_pred eCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEE
Confidence 9876654322211 234588999888877 56678787899999887764433211 2357889998
Q ss_pred CCCCCEEEEEeCCCcEEEEEccCCCcceEEEec-----CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec
Q 013282 327 HPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG-----NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 401 (446)
Q Consensus 327 ~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~-----~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 401 (446)
.++|+.|..|+.++-|.+||... ++ ...+.. ....|.++...++|++.+ |+..| |.+||..++........
T Consensus 414 d~~g~~lWigt~~~Gl~~~d~~~-~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwi-gt~~G-l~~~~~~~~~~~~~~~~ 489 (795)
T 4a2l_A 414 DEKKSLVYIGTHAGGLSILHRNS-GQ-VENFNQRNSQLVNENVYAILPDGEGNLWL-GTLSA-LVRFNPEQRSFTTIEKE 489 (795)
T ss_dssp ETTTTEEEEEETTTEEEEEETTT-CC-EEEECTTTSCCSCSCEEEEEECSSSCEEE-EESSC-EEEEETTTTEEEECCBC
T ss_pred cCCCCEEEEEeCcCceeEEeCCC-Cc-EEEeecCCCCcCCCeeEEEEECCCCCEEE-EecCc-eeEEeCCCCeEEEcccc
Confidence 88888677788877799999854 33 333321 245789999999888555 44455 89999887754322111
Q ss_pred ------cccCeEEEEEcCCCCcEEE
Q 013282 402 ------FFGEISGISFSPDTESLFI 420 (446)
Q Consensus 402 ------~~~~v~~~~~spdg~~l~~ 420 (446)
....|.++...++|...+.
T Consensus 490 ~~~~~~~~~~i~~i~~d~~g~lWig 514 (795)
T 4a2l_A 490 KDGTPVVSKQITTLFRDSHKRLWIG 514 (795)
T ss_dssp TTCCBCCCCCEEEEEECTTCCEEEE
T ss_pred ccccccCCceEEEEEECCCCCEEEE
Confidence 2356889999998875543
No 260
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.61 E-value=0.00035 Score=64.44 Aligned_cols=202 Identities=10% Similarity=-0.010 Sum_probs=123.4
Q ss_pred EEEEEe---CCcEEEEeccCCcEEEEEcCCC---CeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC
Q 013282 192 VSTLAV---KDKLLVAGGFQGELICKHLDRP---GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 192 v~~l~~---~~~~l~tg~~dg~i~vw~~~~~---~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~ 265 (446)
...+++ .+.++++-...+.|..+++... ... .............+++ .+.+..++++-...+.|.++++.
T Consensus 32 p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~--~~~~~~~~~~p~glav--d~~~~~ly~~d~~~~~I~~~~~~ 107 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTK 107 (316)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC--------C--EEEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETT
T ss_pred eEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCccc--EEEEeCCCCCcCEEEE--eecCCeEEEEECCCCEEEEEeCC
Confidence 566777 3455566666788999988652 111 1122222233466666 65555566666778899999987
Q ss_pred cceeeEeee-CCCCeeEEEECCCCCEEEEEec-C-CcEEEEECCCCceEEEe-cCCCCceeEEEECCCCCEEEEEe-CCC
Q 013282 266 KYQLSKHFR-FPWPVNHSSQSPDGKLLIIVGD-N-PDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATGN-QDK 340 (446)
Q Consensus 266 ~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~-d-~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~sgs-~d~ 340 (446)
.......+. .......+++.|.+..|+.+.. . +.|..+++. |+....+ ...-.....++++|++..|+.+. ..+
T Consensus 108 g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d-G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~ 186 (316)
T 1ijq_A 108 GVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLH 186 (316)
T ss_dssp SSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC-CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCC
Confidence 654433333 3356789999997666655543 2 688888875 3333333 22345678999999766665554 567
Q ss_pred cEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec
Q 013282 341 TCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID 401 (446)
Q Consensus 341 ~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~ 401 (446)
.|..+|+.. .....+.. .......+++. .+..+++....+.|..++..+++.+..+..
T Consensus 187 ~I~~~d~dg--~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 187 SISSIDVNG--GNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp EEEEEETTS--CSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred eEEEEecCC--CceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 899999853 33333321 22345678875 355555555678899999877766555543
No 261
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.58 E-value=4e-06 Score=87.28 Aligned_cols=181 Identities=10% Similarity=0.014 Sum_probs=107.0
Q ss_pred EeC-CCCCeEEEEEeCCC----cEEEEecCcc-eeeEe-eeCCCCeeEEEECCCCCEEEEEecC-----CcEEEEECCCC
Q 013282 241 YGS-PSGAVHFTASNNDC----GVRDFDMGKY-QLSKH-FRFPWPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTG 308 (446)
Q Consensus 241 ~~s-~~~~~~l~s~s~dg----~v~iwd~~~~-~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~ 308 (446)
.|| |+|+.++++.+.+| +|+++|+.++ +.+.. +. .....++|+|||+.|+....+ ..|+++++.++
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCCEEEEEEEETTSC
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCCCCEEEEEECCCC
Confidence 449 99997666665544 4999999988 63221 11 123568899999988877654 36888898876
Q ss_pred ce--EEEec-CCCCceeEEEECCCCCEEEEEeC---CCcEEEEEccCCCcce--EEEe-cCCCceEEEEEccCCCEEE-E
Q 013282 309 KT--IASLC-GHLDFSFASAWHPNGVTFATGNQ---DKTCRIWDLRNLSESV--AVLK-GNLGAIRSIRYTSDGRYMA-T 378 (446)
Q Consensus 309 ~~--~~~~~-~~~~~v~~~~~~p~~~~l~sgs~---d~~v~iwd~~~~~~~~--~~~~-~~~~~v~~l~~s~dg~~l~-~ 378 (446)
+. ...+. ........+.|+|+|++|+..+. ...|.++|+....... ..+. ...+...++.|+. |..|+ .
T Consensus 258 ~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~-g~~l~~~ 336 (751)
T 2xe4_A 258 QSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHG-TSHLVIL 336 (751)
T ss_dssp GGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEET-TTEEEEE
T ss_pred chhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeee-CCEEEEE
Confidence 42 22332 23345678899999999887663 3468888986532222 3333 3334555555544 55444 4
Q ss_pred EeCC----CeEEEEEcCCCeeEeE-eecccc--CeEEEEEcCCCCcEEEE-EecCC
Q 013282 379 AEPA----DFVHVYDVKSGYEKEQ-EIDFFG--EISGISFSPDTESLFIG-VWDRT 426 (446)
Q Consensus 379 ~~~d----g~i~iwd~~~~~~~~~-~~~~~~--~v~~~~~spdg~~l~~~-~~D~~ 426 (446)
...+ ..|..+++.++..... +..+.. .+.++.+. +..|+.. ..++.
T Consensus 337 t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~ 390 (751)
T 2xe4_A 337 TNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGL 390 (751)
T ss_dssp ECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTE
T ss_pred eCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCE
Confidence 4333 3677778765322233 344443 34455544 5555544 44443
No 262
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.57 E-value=0.00063 Score=64.99 Aligned_cols=245 Identities=9% Similarity=-0.015 Sum_probs=144.9
Q ss_pred eEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEe---CCcEEEEeccCCcEEEEEcCCCC
Q 013282 144 DVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV---KDKLLVAGGFQGELICKHLDRPG 220 (446)
Q Consensus 144 ~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~ 220 (446)
.++++....|+..+........++..- ..+..|++ ++.++++-...+.|..+++....
T Consensus 85 ~ll~~~~~~I~~i~l~~~~~~~~~~~~-------------------~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~ 145 (400)
T 3p5b_L 85 YLFFTNRHEVRKMTLDRSEYTSLIPNL-------------------RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAH 145 (400)
T ss_dssp EEEEEETTEEEEECTTSCSCEEEECSC-------------------SCEEEEEEETTTTEEEEEETTTTEEEEEEC----
T ss_pred eeEEeccceeEEEccCCcceeEecccc-------------------CcceEEeeeeccCceEEEecCCCeEEEEEcccCC
Confidence 455555566777766555433332111 13667777 34555555667888888886521
Q ss_pred e-eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCCeeEEEECCCCCEEEEEe--c
Q 013282 221 V-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWPVNHSSQSPDGKLLIIVG--D 296 (446)
Q Consensus 221 ~-~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~--~ 296 (446)
. ................+++ .+.+..++++-...+.|.+.++........+. .-.....+++.|.+..|+.+. .
T Consensus 146 ~~~~~~~~~~~~~~~p~glav--D~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~ 223 (400)
T 3p5b_L 146 GVSSYDTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGT 223 (400)
T ss_dssp --CCCEEEECSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSS
T ss_pred CCCcceEEEeCCCCCcccEEE--EecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCC
Confidence 0 0001222223334566777 55555567776778899999997665444444 334578999999766665554 2
Q ss_pred CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe-CCCcEEEEEccCCCcceEEEec--CCCceEEEEEccCC
Q 013282 297 NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNLSESVAVLKG--NLGAIRSIRYTSDG 373 (446)
Q Consensus 297 d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~~~~~~~~~~--~~~~v~~l~~s~dg 373 (446)
.+.|...++........+...-.....|+++|++..|+.+. ..+.|..+|+.. ......... ......+|++. .+
T Consensus 224 ~~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG-~~~~~~~~~~~~l~~P~gl~v~-~~ 301 (400)
T 3p5b_L 224 PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG-GNRKTILEDEKRLAHPFSLAVF-ED 301 (400)
T ss_dssp SCCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS-CCCEEEEECSSTTSSEEEEEEE-TT
T ss_pred CCEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCC-CccEEEEeCCCCCCCCEEEEEe-CC
Confidence 47898888864443333333345678999998776666554 467899999843 322222222 22345577773 33
Q ss_pred CEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEE
Q 013282 374 RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISF 411 (446)
Q Consensus 374 ~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 411 (446)
.++++....+.|..+|..+|..+..+......+.++..
T Consensus 302 ~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v 339 (400)
T 3p5b_L 302 KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVL 339 (400)
T ss_dssp EEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEE
T ss_pred EEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEE
Confidence 45555566788999998888766666544444555543
No 263
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.55 E-value=0.00031 Score=64.88 Aligned_cols=214 Identities=6% Similarity=-0.048 Sum_probs=128.8
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
...+++| ++.++.+-...+.|..+++....... ......-.....+++ .+.+..++++-...+.|.++++...
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--~~~~~~l~~p~glav--d~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--NVVVSGLLSPDGLAC--DWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--EEEEECCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--EEEcCCCCCccEEEE--EcCCCeEEEEECCCCEEEEEECCCC
Confidence 3567777 35666666777889888887653211 111122223456666 5555556667667789999998754
Q ss_pred eeeEeee-CCCCeeEEEECCCCCEEEEEe--cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcEE
Q 013282 268 QLSKHFR-FPWPVNHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCR 343 (446)
Q Consensus 268 ~~~~~~~-~~~~v~~~~~sp~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~ 343 (446)
.....+. .......+++.|.+..|+.+. ..+.|..+++........+...-.....++|+|++..|+.+ +..+.|.
T Consensus 112 ~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~ 191 (318)
T 3sov_A 112 LRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIH 191 (318)
T ss_dssp SCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred cEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEE
Confidence 4333332 334578999999766665554 35788888876333222223333456899999966655554 4577899
Q ss_pred EEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEE
Q 013282 344 IWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 410 (446)
Q Consensus 344 iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 410 (446)
.+|+.. ......+.+.......+++.. +..+.+-...+.|..++..+|+....+......+.+++
T Consensus 192 ~~d~dG-~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~ 256 (318)
T 3sov_A 192 KSNLDG-TNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIH 256 (318)
T ss_dssp EEETTS-CSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEE
T ss_pred EEcCCC-CceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEE
Confidence 999853 222222232344566777753 34445555678899999888865555443323333443
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.53 E-value=1e-05 Score=82.88 Aligned_cols=226 Identities=11% Similarity=0.022 Sum_probs=131.4
Q ss_pred EEEe-CCcEEEEeccCC-----------cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEe-CCCcEE
Q 013282 194 TLAV-KDKLLVAGGFQG-----------ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASN-NDCGVR 260 (446)
Q Consensus 194 ~l~~-~~~~l~tg~~dg-----------~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s-~dg~v~ 260 (446)
++.. ++++++.||.++ .+.+||..+............+.....++.+ ..++. +++.|+ .+..+.
T Consensus 192 av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~--~~~g~-lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 192 AIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISM--DGNGQ-IVVTGGNDAKKTS 268 (656)
T ss_dssp EEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEE--CTTSC-EEEECSSSTTCEE
T ss_pred EEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccC--CCCCC-EEEeCCCCCCceE
Confidence 3344 888999987643 5788998877644322222223333333444 67776 677776 456899
Q ss_pred EEecCcceeeEeee--CCCCeeEEEECCCCCEEEEEe-cC-----CcEEEEECCCCceEEE-------e-----------
Q 013282 261 DFDMGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVG-DN-----PDGLLVDSMTGKTIAS-------L----------- 314 (446)
Q Consensus 261 iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~-~d-----~~i~i~d~~~~~~~~~-------~----------- 314 (446)
+||+.+.+....-. ....-.++++.+++++++.|+ .+ ..+.+||..+++-... +
T Consensus 269 ~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 269 LYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTT
T ss_pred EecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCccccccccccccceeec
Confidence 99998776543322 223334556667999999988 33 5689999876642221 0
Q ss_pred -------cCCCC---------------------------------------ceeEEEECC-CCCEEEEEeCCC-------
Q 013282 315 -------CGHLD---------------------------------------FSFASAWHP-NGVTFATGNQDK------- 340 (446)
Q Consensus 315 -------~~~~~---------------------------------------~v~~~~~~p-~~~~l~sgs~d~------- 340 (446)
-+..+ ...++.|.. ++++++.|+.++
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~ 428 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDAT 428 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCC
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcC
Confidence 00000 012233322 677888887543
Q ss_pred ----cEEEEEccCCCcceEEE--ecCCCc-eEEEEEccCCCEEEEEeCC-----------CeEEEEEcCCCeeEeE--ee
Q 013282 341 ----TCRIWDLRNLSESVAVL--KGNLGA-IRSIRYTSDGRYMATAEPA-----------DFVHVYDVKSGYEKEQ--EI 400 (446)
Q Consensus 341 ----~v~iwd~~~~~~~~~~~--~~~~~~-v~~l~~s~dg~~l~~~~~d-----------g~i~iwd~~~~~~~~~--~~ 400 (446)
.|.+||... ..-.... ..+... -.+....|+|++++.|+.+ ..+.+||..+.+-... ..
T Consensus 429 ~~~~~v~~yd~~~-~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~ 507 (656)
T 1k3i_A 429 TNAHIITLGEPGT-SPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNS 507 (656)
T ss_dssp CCEEEEECCSTTS-CCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCS
T ss_pred CcceEEEcCCCCC-CCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCC
Confidence 577788744 2222211 111222 2344667899999998854 4689999987643221 11
Q ss_pred ccccCeEEEEEcCCCCcEEEEEe
Q 013282 401 DFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 401 ~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
..........+.|+|+.+++|+.
T Consensus 508 ~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 508 IVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp SCCCTTEEEEECTTSCEEEEECC
T ss_pred CccccccHhhcCCCcEEEecCCC
Confidence 11222345567799999888874
No 265
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.53 E-value=0.00013 Score=73.31 Aligned_cols=160 Identities=11% Similarity=0.082 Sum_probs=100.2
Q ss_pred eCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC-C-CceeeEEEEeC-CCCCeEEEEEe------CCCcEEEEecCcc
Q 013282 197 VKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD-N-AITNAVEIYGS-PSGAVHFTASN------NDCGVRDFDMGKY 267 (446)
Q Consensus 197 ~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~-~-~~v~~i~~~~s-~~~~~~l~s~s------~dg~v~iwd~~~~ 267 (446)
+.+..++.++.++.|..+|..+++........... . .......+.-. .+|+..+++++ .++.|+.+|..++
T Consensus 115 ~~~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG 194 (582)
T 1flg_A 115 IYGDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTG 194 (582)
T ss_dssp EETTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTC
T ss_pred EECCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCC
Confidence 45677888889999999999888866544332110 0 11111122111 12332455554 3789999999999
Q ss_pred eeeEeeeCCC-Ce-----------------------------------------eEEEECCCCCEEEEEec---------
Q 013282 268 QLSKHFRFPW-PV-----------------------------------------NHSSQSPDGKLLIIVGD--------- 296 (446)
Q Consensus 268 ~~~~~~~~~~-~v-----------------------------------------~~~~~sp~~~~l~~~~~--------- 296 (446)
+.+....... .+ ..+++.|...++++++.
T Consensus 195 ~~~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~ 274 (582)
T 1flg_A 195 EEIWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWA 274 (582)
T ss_dssp CEEEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGG
T ss_pred CEEeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcc
Confidence 9887665321 00 12456667777776663
Q ss_pred -----------C----CcEEEEECCCCceEEEecC--CC--------CceeEEEEC-CCCC---EEEEEeCCCcEEEEEc
Q 013282 297 -----------N----PDGLLVDSMTGKTIASLCG--HL--------DFSFASAWH-PNGV---TFATGNQDKTCRIWDL 347 (446)
Q Consensus 297 -----------d----~~i~i~d~~~~~~~~~~~~--~~--------~~v~~~~~~-p~~~---~l~sgs~d~~v~iwd~ 347 (446)
+ +.|..+|..+|+.+-.++. |. .++. +... .+|+ .++.++.+|.++++|.
T Consensus 275 r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~ 353 (582)
T 1flg_A 275 RTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDR 353 (582)
T ss_dssp GSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEET
T ss_pred cccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEEC
Confidence 2 5799999999999888753 32 1221 1221 4674 7888999999999999
Q ss_pred cCCCcceEEEe
Q 013282 348 RNLSESVAVLK 358 (446)
Q Consensus 348 ~~~~~~~~~~~ 358 (446)
.+ ++.+..+.
T Consensus 354 ~t-G~~lw~~~ 363 (582)
T 1flg_A 354 SN-GKLQNAFP 363 (582)
T ss_dssp TT-CCEEEEEE
T ss_pred CC-CCEecccc
Confidence 66 66655443
No 266
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.49 E-value=0.00024 Score=66.62 Aligned_cols=213 Identities=10% Similarity=-0.023 Sum_probs=129.3
Q ss_pred cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCC
Q 013282 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWP 278 (446)
Q Consensus 200 ~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~ 278 (446)
.+|+.+.. ..|+..++...... ..... ......+++ ++.+..++++-...+.|+.+++........+. ....
T Consensus 45 ~~ll~~~~-~~I~~i~~~g~~~~---~~~~~-~~~~~~l~~--d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 117 (349)
T 3v64_C 45 PVLLFANR-IDIRQVLPHRSEYT---LLLNN-LENAIALDF--HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 117 (349)
T ss_dssp CEEEEECB-SCEEEECTTSCCEE---EEECS-CSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSC
T ss_pred ceeEeecc-cceEEEeCCCCeeE---EeecC-CCceEEEEE--eccccEEEEEeccCCceEEEecCCCCceEEEeCCCCC
Confidence 34444433 44777777554322 22222 223455555 77666666676678899999987765444333 2234
Q ss_pred eeEEEECCCCCEE-EEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEE-EEeCC-CcEEEEEccCCCcceE
Q 013282 279 VNHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFA-TGNQD-KTCRIWDLRNLSESVA 355 (446)
Q Consensus 279 v~~~~~sp~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~-sgs~d-~~v~iwd~~~~~~~~~ 355 (446)
...+++.+.+..| ++-...+.|.+.++........+.........++++|.+..|+ +-... +.|...++. +....
T Consensus 118 p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~ 195 (349)
T 3v64_C 118 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRR 195 (349)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCE
T ss_pred ccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC--CCCcE
Confidence 6788998855545 5555678899999875443333433445678999999555544 44444 778888874 33333
Q ss_pred EEe-cCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 356 VLK-GNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 356 ~~~-~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
.+. ......+.|+|+|++..|+.+. ..+.|..+++........+........++++. +..|+.+.+
T Consensus 196 ~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~ 263 (349)
T 3v64_C 196 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDW 263 (349)
T ss_dssp ESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE--TTEEEEEET
T ss_pred EEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE--CCEEEEecC
Confidence 332 2344678999999777776665 46789999987543222222334567788883 345665544
No 267
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.49 E-value=0.00012 Score=73.48 Aligned_cols=150 Identities=11% Similarity=0.053 Sum_probs=97.5
Q ss_pred EEEeccCCcEEEEEcCCCCeeeEEEEeecC-C-CceeeEEEEeCCCCCeEEEEEe------CCCcEEEEecCcceeeEee
Q 013282 202 LVAGGFQGELICKHLDRPGVSFCSRTTYDD-N-AITNAVEIYGSPSGAVHFTASN------NDCGVRDFDMGKYQLSKHF 273 (446)
Q Consensus 202 l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~-~-~~v~~i~~~~s~~~~~~l~s~s------~dg~v~iwd~~~~~~~~~~ 273 (446)
|+.++.++.|..+|..+++........... . .......+ .++ .+++++ .++.|+.+|..+++.+..+
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v---~~g--~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~ 198 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV---VKD--KVIIGSSGAELGVRGYLTAYDVKTGEQVWRA 198 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE---ETT--EEEECCBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE---ECC--EEEEEecccccCCCCeEEEEECCCCcEEEEE
Confidence 788888999999999888766543321100 0 11111122 133 355554 3799999999999999887
Q ss_pred eCCCCe---------------------------------------eEEEECCCCCEEEEEecC----------------C
Q 013282 274 RFPWPV---------------------------------------NHSSQSPDGKLLIIVGDN----------------P 298 (446)
Q Consensus 274 ~~~~~v---------------------------------------~~~~~sp~~~~l~~~~~d----------------~ 298 (446)
....+. ..+++.+...+++.++.+ +
T Consensus 199 ~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~ 278 (599)
T 1w6s_A 199 YATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTM 278 (599)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSS
T ss_pred cCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccc
Confidence 733222 134556677788777665 3
Q ss_pred cEEEEECCCCceEEEecC--CC--------CceeEEEEC-CCC---CEEEEEeCCCcEEEEEccCCCcceEEEe
Q 013282 299 DGLLVDSMTGKTIASLCG--HL--------DFSFASAWH-PNG---VTFATGNQDKTCRIWDLRNLSESVAVLK 358 (446)
Q Consensus 299 ~i~i~d~~~~~~~~~~~~--~~--------~~v~~~~~~-p~~---~~l~sgs~d~~v~iwd~~~~~~~~~~~~ 358 (446)
.|..+|..+|+.+..++. |. .++. +... .+| +.++.++.+|.+.++|.++ ++.+....
T Consensus 279 sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~t-G~~lw~~~ 350 (599)
T 1w6s_A 279 TIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTD-GALVSANK 350 (599)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTT-CCEEEEEE
T ss_pred eEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCC-CCEeeccc
Confidence 799999999999887763 21 1121 2222 467 5778889999999999966 66655443
No 268
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.49 E-value=4.5e-05 Score=76.71 Aligned_cols=159 Identities=19% Similarity=0.093 Sum_probs=103.2
Q ss_pred CcEEEEecCcceeeEeeeCC-C------Cee---EEEEC-CCCC---EEEEEecCCcEEEEECCCCceEEEecCCC----
Q 013282 257 CGVRDFDMGKYQLSKHFRFP-W------PVN---HSSQS-PDGK---LLIIVGDNPDGLLVDSMTGKTIASLCGHL---- 318 (446)
Q Consensus 257 g~v~iwd~~~~~~~~~~~~~-~------~v~---~~~~s-p~~~---~l~~~~~d~~i~i~d~~~~~~~~~~~~~~---- 318 (446)
+.|..+|..+++.+..++.. . .+. -+... .+|+ .++.++.+|.++++|..+|+.+..+....
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~ 370 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITW 370 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCS
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccc
Confidence 68999999999999988621 1 111 11221 4674 67788999999999999999887654321
Q ss_pred ---------Cc--------------------------------eeEEEECCCCCEEEEEe--------------------
Q 013282 319 ---------DF--------------------------------SFASAWHPNGVTFATGN-------------------- 337 (446)
Q Consensus 319 ---------~~--------------------------------v~~~~~~p~~~~l~sgs-------------------- 337 (446)
.+ ...++++|...++++..
T Consensus 371 ~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~ 450 (582)
T 1flg_A 371 ASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAY 450 (582)
T ss_dssp EEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCC
T ss_pred cccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCce
Confidence 00 01356677555554432
Q ss_pred -------------CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecccc
Q 013282 338 -------------QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFG 404 (446)
Q Consensus 338 -------------~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 404 (446)
.+|.|..||+.+ ++.+-...... ++..-.....+.+++.|+.|+.|+.||.++|+.+.++....+
T Consensus 451 ~g~~~~~~p~~~~~~G~l~A~D~~t-G~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g 528 (582)
T 1flg_A 451 LGMGFRIKRMYDDHVGSLRAMDPVS-GKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSG 528 (582)
T ss_dssp CCEEEEEEESCSSCSEEEEEECTTT-CCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC
T ss_pred eccceeecCCCCCCcceEEEEECCC-CCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCC
Confidence 257899999966 66665554322 222211222466788899999999999999998887765433
Q ss_pred CeE-EEEEcCCCCc
Q 013282 405 EIS-GISFSPDTES 417 (446)
Q Consensus 405 ~v~-~~~~spdg~~ 417 (446)
.+. -+.|..+|+.
T Consensus 529 ~~a~P~~y~~~G~q 542 (582)
T 1flg_A 529 IVSPPITWEQDGEQ 542 (582)
T ss_dssp CCSCCEEEEETTEE
T ss_pred cccCceEEEECCEE
Confidence 222 2667777763
No 269
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.47 E-value=0.00017 Score=66.71 Aligned_cols=194 Identities=10% Similarity=-0.010 Sum_probs=114.7
Q ss_pred EEEEEeC--CcEEEEeccCCcEEEEEcCCCCeeeEEEEeec-CCCceeeEEEEeCC-CCCeEEEEEeC------------
Q 013282 192 VSTLAVK--DKLLVAGGFQGELICKHLDRPGVSFCSRTTYD-DNAITNAVEIYGSP-SGAVHFTASNN------------ 255 (446)
Q Consensus 192 v~~l~~~--~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~-~~~~v~~i~~~~s~-~~~~~l~s~s~------------ 255 (446)
...++++ +..|+.+...+.|.+++..............+ .....+.+.+ .+ +|. +.++...
T Consensus 82 p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~--d~~~G~-l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 82 TYDISYNLQNNQLYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTV--DQRTGI-VYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp EEEEEEETTTTEEEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEE--CTTTCC-EEEEESCSSCCTTCHHHHH
T ss_pred CceEEEcCCCCcEEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEE--ecCCCE-EEEECCcccccccccceeh
Confidence 5667763 45566665445577777653321111111100 1123455666 88 886 4444321
Q ss_pred -----CCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEE-ecCCcEEEEECCCCc--eEEEecCCCCceeEEEEC
Q 013282 256 -----DCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIV-GDNPDGLLVDSMTGK--TIASLCGHLDFSFASAWH 327 (446)
Q Consensus 256 -----dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~ 327 (446)
.+.|..||..+++.......-...+.++++|+++.|.++ +..+.|..|++.... ....+....+ ...+++.
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d 237 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRN 237 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEEC
T ss_pred cccCCCceEEEEeCCCCEEEEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEEC
Confidence 367889998777654433322345789999999977655 556899999987421 1112211223 6789999
Q ss_pred CCCCEEEEEeC----------CCcEEEEEccCCCcceEEEecCC----CceEEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 013282 328 PNGVTFATGNQ----------DKTCRIWDLRNLSESVAVLKGNL----GAIRSIRYTSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 328 p~~~~l~sgs~----------d~~v~iwd~~~~~~~~~~~~~~~----~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
++|+++++... .+.|..+|. . ++.+..+.... ..++++++ .+++++++....+.|.++++..
T Consensus 238 ~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 238 ADGHFWVSSSEELDGNMHGRVDPKGIKFDE-F-GNILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp TTSCEEEEEEEETTSSTTSCEEEEEEEECT-T-SCEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred CCCCEEEEecCcccccccCCCccEEEEECC-C-CCEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 99987776644 456778876 3 56666665432 34667766 4565555555678899998764
No 270
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.46 E-value=0.00012 Score=69.79 Aligned_cols=213 Identities=10% Similarity=-0.027 Sum_probs=129.9
Q ss_pred cEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee-CCCC
Q 013282 200 KLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR-FPWP 278 (446)
Q Consensus 200 ~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~-~~~~ 278 (446)
.+|+.+.. ..|+..++...... .+... ......+++ ++.+..++++-...+.|+.+++........+. ....
T Consensus 88 ~~l~~~~~-~~I~~i~~~~~~~~---~~~~~-~~~~~gl~~--d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~ 160 (386)
T 3v65_B 88 PVLLFANR-IDIRQVLPHRSEYT---LLLNN-LENAIALDF--HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLES 160 (386)
T ss_dssp CEEEEECB-SCEEEECTTSCCCE---EEECS-CSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSC
T ss_pred ceeEeecC-ccceeeccCCCcEE---EEecC-CCccEEEEE--ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCC
Confidence 44444443 56777787655432 22222 223455555 77666667776778899999998765444433 2234
Q ss_pred eeEEEECCCCCEE-EEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC-C-CcEEEEEccCCCcceE
Q 013282 279 VNHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ-D-KTCRIWDLRNLSESVA 355 (446)
Q Consensus 279 v~~~~~sp~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~-d-~~v~iwd~~~~~~~~~ 355 (446)
...+++.+.+..| ++-...+.|.+.++........+.........++++|.+..|+.... . +.|..+++. +....
T Consensus 161 p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~ 238 (386)
T 3v65_B 161 PGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD--GSGRR 238 (386)
T ss_dssp CCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCE
T ss_pred ccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC--CCCcE
Confidence 5678888855555 55556778888887654433334434456789999996655555443 4 678888874 33333
Q ss_pred EE-ecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 356 VL-KGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 356 ~~-~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
.+ .......+.|+|+|++..|+.+. ..+.|..+++........+........+|++. +..|+.+.+
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~--~~~ly~td~ 306 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF--EDSLYWTDW 306 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE--TTEEEEEET
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE--CCEEEEeeC
Confidence 33 23344678999998777776665 46789999986543222222234567788883 345665544
No 271
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.43 E-value=0.00071 Score=70.18 Aligned_cols=206 Identities=8% Similarity=-0.052 Sum_probs=125.2
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCee-eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVS-FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~-~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.+..|++ .+.++++-...+.|+.+++...... ....+..........|++ .+.+..++++-...+.|.+.++..
T Consensus 425 ~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAv--D~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 425 NVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeee--eecCCcEEEEecCCCeEEEEeCCC
Confidence 3566777 4556666667788888888653210 111222223344566777 666666777777888999999976
Q ss_pred ceeeEeee-CCCCeeEEEECCCCCEEEEEec--CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcE
Q 013282 267 YQLSKHFR-FPWPVNHSSQSPDGKLLIIVGD--NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTC 342 (446)
Q Consensus 267 ~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v 342 (446)
......+. .-.....|++.|.+..|+.+.. .+.|...++........+.........|++.|.+..|+.+ ...+.|
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I 582 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSI 582 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcE
Confidence 55444443 3345889999997666655542 3678888886444433344344678899999866666555 446689
Q ss_pred EEEEccCCCcceEEEecC--CCceEEEEEccCCCEEEEE-eCCCeEEEEEcCCCeeEeEeec
Q 013282 343 RIWDLRNLSESVAVLKGN--LGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQEID 401 (446)
Q Consensus 343 ~iwd~~~~~~~~~~~~~~--~~~v~~l~~s~dg~~l~~~-~~dg~i~iwd~~~~~~~~~~~~ 401 (446)
...++.. ......+... .....+|++. +.+|+.+ ...+.|...|..+|..+..+..
T Consensus 583 ~~~d~dG-~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~~~~~I~~~dk~tG~~~~~l~~ 641 (791)
T 3m0c_C 583 SSIDVNG-GNRKTILEDEKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAE 641 (791)
T ss_dssp EEEETTS-CSCEEEEECTTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred EEEecCC-CceEEEecCCCccCCCCEEEEe--CCEEEEEECCCCEEEEEeCCCCcceEEeec
Confidence 9999843 3333333321 2234466663 3355544 4567899999888866555543
No 272
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.43 E-value=0.00017 Score=69.62 Aligned_cols=216 Identities=13% Similarity=0.102 Sum_probs=123.9
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC----cEEEEecCcceee--Ee
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC----GVRDFDMGKYQLS--KH 272 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg----~v~iwd~~~~~~~--~~ 272 (446)
+..|..+...+.|+.+++...... .+. ........+++ +++|+.++++....+ .+..++. .+... ..
T Consensus 149 ~g~Lyv~d~~~~I~~id~~~~~v~---~~~-~~~~~P~~ia~--d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~ 221 (430)
T 3tc9_A 149 HNHLYLVGEQHPTRLIDFEKEYVS---TVY-SGLSKVRTICW--THEADSMIITNDQNNNDRPNNYILTR-ESGFKVITE 221 (430)
T ss_dssp EEEEEEEEBTEEEEEEETTTTEEE---EEE-CCCSCEEEEEE--CTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEE
T ss_pred CCeEEEEeCCCcEEEEECCCCEEE---EEe-cCCCCcceEEE--eCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeee
Confidence 455666555588888888665322 222 23344566666 899985555554332 2333443 22221 22
Q ss_pred eeCCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEec-CCCCceeEEEECCCCCEEEE-EeCCCcEEEEEccC
Q 013282 273 FRFPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLC-GHLDFSFASAWHPNGVTFAT-GNQDKTCRIWDLRN 349 (446)
Q Consensus 273 ~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~v~~~~~~p~~~~l~s-gs~d~~v~iwd~~~ 349 (446)
+........++++| ++.++++-..++.|+.++..++....... +.......++|+|+|++|+. -...+.|..++...
T Consensus 222 l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 222 LTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred eccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCc
Confidence 22223456788999 67766666678899999988765422222 12234678999999995544 45578899988743
Q ss_pred C-Cc--ceEEEecC---------------CCceE-EEEEc--------cCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc
Q 013282 350 L-SE--SVAVLKGN---------------LGAIR-SIRYT--------SDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 402 (446)
Q Consensus 350 ~-~~--~~~~~~~~---------------~~~v~-~l~~s--------~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 402 (446)
. +. .+..+.+. -.... .++.. ++|.+.++-..++.|+.++ .+|... .+.+.
T Consensus 302 ~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~-~~~g~ 379 (430)
T 3tc9_A 302 KTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVT-TFAGR 379 (430)
T ss_dssp TTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEE-EEEEC
T ss_pred ccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEE-EEEeC
Confidence 1 11 12222221 01122 45553 3465555555677899998 456432 23221
Q ss_pred ------------------ccCeEEEEEcCCCCcEEEEEe
Q 013282 403 ------------------FGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 403 ------------------~~~v~~~~~spdg~~l~~~~~ 423 (446)
.....+|+++|++..|+++-.
T Consensus 380 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~ 418 (430)
T 3tc9_A 380 GSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDR 418 (430)
T ss_dssp CTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEG
T ss_pred CCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEEC
Confidence 125889999996556666643
No 273
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.42 E-value=0.00074 Score=70.57 Aligned_cols=223 Identities=14% Similarity=0.062 Sum_probs=139.2
Q ss_pred ccceEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEE------eecCCCceeeEEEEeCCCCCeEEEEEeCCCcEE
Q 013282 188 TQTQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRT------TYDDNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (446)
Q Consensus 188 ~~~~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~------~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~ 260 (446)
....|.++.. ....|-.|+.++-|..++............ ..-....|.++.. .++|. |..|+.++.|.
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~--d~~g~--lWigt~~~Gl~ 386 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCD--DGQGK--LWIGTDGGGIN 386 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEE--CTTSC--EEEEEBSSCEE
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEE--cCCCC--EEEEeCCCcEE
Confidence 3446888888 345677788777788888765543211100 0012244666655 67775 66666677799
Q ss_pred EEecCcceeeEeee----CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec--CCCCceeEEEECCCCCEEE
Q 013282 261 DFDMGKYQLSKHFR----FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC--GHLDFSFASAWHPNGVTFA 334 (446)
Q Consensus 261 iwd~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--~~~~~v~~~~~~p~~~~l~ 334 (446)
.|+..+++...... ....|.++...+++. |.+|+.++.|..++..+++...... .....|.++...++|.+.+
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lwi 465 (781)
T 3v9f_A 387 VFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKKIWI 465 (781)
T ss_dssp EEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSEEEE
T ss_pred EEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCCEEE
Confidence 99987655432211 235688888887776 4557766779999988776433221 1346789999888876444
Q ss_pred EEeCCCcEEEEEccCCCcceEEEecC-----CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec----cccC
Q 013282 335 TGNQDKTCRIWDLRNLSESVAVLKGN-----LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID----FFGE 405 (446)
Q Consensus 335 sgs~d~~v~iwd~~~~~~~~~~~~~~-----~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~ 405 (446)
|+. +-|..||... .+........ ...|.++...++|++.+ |+..+-|..||..++... .+.. ....
T Consensus 466 -gt~-~Gl~~~~~~~-~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~~~l~~~~ 540 (781)
T 3v9f_A 466 -GTH-AGVFVIDLAS-KKVIHHYDTSNSQLLENFVRSIAQDSEGRFWI-GTFGGGVGIYTPDMQLVR-KFNQYEGFCSNT 540 (781)
T ss_dssp -EET-TEEEEEESSS-SSCCEEECTTTSSCSCSCEEEEEECTTCCEEE-EESSSCEEEECTTCCEEE-EECTTTTCSCSC
T ss_pred -EEC-CceEEEeCCC-CeEEecccCcccccccceeEEEEEcCCCCEEE-EEcCCCEEEEeCCCCeEE-EccCCCCCCCCe
Confidence 555 4588899854 3332222211 35789999999998655 555333888998766432 2221 1346
Q ss_pred eEEEEEcCCCCcEEE
Q 013282 406 ISGISFSPDTESLFI 420 (446)
Q Consensus 406 v~~~~~spdg~~l~~ 420 (446)
|.++...++|...++
T Consensus 541 i~~i~~d~~g~lWi~ 555 (781)
T 3v9f_A 541 INQIYRSSKGQMWLA 555 (781)
T ss_dssp EEEEEECTTSCEEEE
T ss_pred eEEEEECCCCCEEEE
Confidence 889999888875543
No 274
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.38 E-value=0.00047 Score=72.04 Aligned_cols=222 Identities=12% Similarity=0.017 Sum_probs=137.3
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEE-------Ee----ecCCCceeeEEEEeCCCCCeEEEEEeCCCc
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSR-------TT----YDDNAITNAVEIYGSPSGAVHFTASNNDCG 258 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~-------~~----~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~ 258 (446)
.|.++.. ....|..|+..+-|.+++..+........ .. .-....|.++.. .++|. |-.|+.++.
T Consensus 259 ~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~--D~~g~--lWigt~~~G 334 (781)
T 3v9f_A 259 YIFSIKQLKDNKLWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQ--DSFNN--IWIGTWGGG 334 (781)
T ss_dssp CEEEEEECTTSEEEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEE--CSSCC--EEEEEBSSC
T ss_pred eEEEEEECCCCCEEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEE--eCCCC--EEEEecCCe
Confidence 6888888 45667778775668888886654221111 00 012234555554 77775 666777788
Q ss_pred EEEEecCcceeeEee-------e---CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe---cCCCCceeEEE
Q 013282 259 VRDFDMGKYQLSKHF-------R---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL---CGHLDFSFASA 325 (446)
Q Consensus 259 v~iwd~~~~~~~~~~-------~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~---~~~~~~v~~~~ 325 (446)
|..++..+....... . ....|.++...++|+ |.+|+.++-|.+++..+++..... ......|.++.
T Consensus 335 l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~ 413 (781)
T 3v9f_A 335 INFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK-LWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSL 413 (781)
T ss_dssp EEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC-EEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEE
T ss_pred EEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC-EEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEE
Confidence 999998755432221 1 234588998888776 556776677999998765432211 12346789998
Q ss_pred ECCCCCEEEEEeCCCcEEEEEccCCCcceEEEe---cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc
Q 013282 326 WHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDF 402 (446)
Q Consensus 326 ~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~ 402 (446)
..++|.+.+ |+.++-+..+|... ++ ...+. .....|.++...++|++.+ |+. +-|.+||..++.........
T Consensus 414 ~d~~g~lWi-gt~~~Gl~~~~~~~-~~-~~~~~~~~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~ 488 (781)
T 3v9f_A 414 KDSEGNLWF-GTYLGNISYYNTRL-KK-FQIIELEKNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS 488 (781)
T ss_dssp ECTTSCEEE-EETTEEEEEECSSS-CE-EEECCSTTTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT
T ss_pred ECCCCCEEE-EeccCCEEEEcCCC-Cc-EEEeccCCCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc
Confidence 888877554 67666788888754 32 33332 1345789999888887444 555 45999998876433222111
Q ss_pred -----ccCeEEEEEcCCCCcEEEEEe
Q 013282 403 -----FGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 403 -----~~~v~~~~~spdg~~l~~~~~ 423 (446)
...|.++...++|.+.+ |+.
T Consensus 489 ~~~~~~~~i~~i~~d~~g~lWi-gt~ 513 (781)
T 3v9f_A 489 NSQLLENFVRSIAQDSEGRFWI-GTF 513 (781)
T ss_dssp TSSCSCSCEEEEEECTTCCEEE-EES
T ss_pred ccccccceeEEEEEcCCCCEEE-EEc
Confidence 35688999999887544 443
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.36 E-value=0.00021 Score=65.93 Aligned_cols=166 Identities=9% Similarity=-0.050 Sum_probs=108.1
Q ss_pred CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEE-EecCCcEEEEECCC----CceEEEecCCCCceeEEEECCC
Q 013282 255 NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLII-VGDNPDGLLVDSMT----GKTIASLCGHLDFSFASAWHPN 329 (446)
Q Consensus 255 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~p~ 329 (446)
....|+..|+.+.+....+.....+..++|++.+..|+. -...+.|+.+++.. ......+.........+++.+.
T Consensus 8 ~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~ 87 (316)
T 1ijq_A 8 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 87 (316)
T ss_dssp CBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred CCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeec
Confidence 335799999988776666555566889999987665554 45578999999875 2222223322345578899874
Q ss_pred -CCEEEEEeCCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCC--CeEEEEEcCCCeeEeEee-ccccC
Q 013282 330 -GVTFATGNQDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPA--DFVHVYDVKSGYEKEQEI-DFFGE 405 (446)
Q Consensus 330 -~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~d--g~i~iwd~~~~~~~~~~~-~~~~~ 405 (446)
+++.++-...+.|.+.++.. ......+.........+++.|.+..|+.+... +.|..+++... ....+. .....
T Consensus 88 ~~~ly~~d~~~~~I~~~~~~g-~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~~~~ 165 (316)
T 1ijq_A 88 HSNIYWTDSVLGTVSVADTKG-VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTENIQW 165 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTS-SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSSCSC
T ss_pred CCeEEEEECCCCEEEEEeCCC-CceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECCCCC
Confidence 44555556678999999843 22222333334567899999977766665543 68988887643 333332 23456
Q ss_pred eEEEEEcCCCCcEEEEE
Q 013282 406 ISGISFSPDTESLFIGV 422 (446)
Q Consensus 406 v~~~~~spdg~~l~~~~ 422 (446)
.++++++|++..|+.+-
T Consensus 166 P~gla~d~~~~~lY~~D 182 (316)
T 1ijq_A 166 PNGITLDLLSGRLYWVD 182 (316)
T ss_dssp EEEEEEETTTTEEEEEE
T ss_pred ceEEEEeccCCEEEEEE
Confidence 88999999888887664
No 276
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.35 E-value=6.2e-05 Score=75.68 Aligned_cols=196 Identities=11% Similarity=0.008 Sum_probs=122.3
Q ss_pred CcEEEEecc-CCcEEEEEc-CCCCeeeEEEEeecCC--------CceeeEEEEeCCCCC---eEEEEEeCCCcEEEEecC
Q 013282 199 DKLLVAGGF-QGELICKHL-DRPGVSFCSRTTYDDN--------AITNAVEIYGSPSGA---VHFTASNNDCGVRDFDMG 265 (446)
Q Consensus 199 ~~~l~tg~~-dg~i~vw~~-~~~~~~~~~~~~~~~~--------~~v~~i~~~~s~~~~---~~l~s~s~dg~v~iwd~~ 265 (446)
+..|++++. ++.|..+|. .+++............ .....+.+ +|.+. ..++.++.|+.|..+|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av--~p~~g~~~~rV~v~t~dg~l~AlDa~ 139 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAY--WPGDGKTPALILKTQLDGNVAALNAE 139 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEE--ECCCSSSCCEEEEECTTSEEEEEETT
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEE--EecCCcceeEEEEEcCCCEEEEEECC
Confidence 556666666 888999998 7777654432211100 00112333 33333 127778889999999999
Q ss_pred cceeeEeeeCCC-----CeeE-EEECCCCCEEEEEe------cCCcEEEEECCCCceEEEecCCCCc-------------
Q 013282 266 KYQLSKHFRFPW-----PVNH-SSQSPDGKLLIIVG------DNPDGLLVDSMTGKTIASLCGHLDF------------- 320 (446)
Q Consensus 266 ~~~~~~~~~~~~-----~v~~-~~~sp~~~~l~~~~------~d~~i~i~d~~~~~~~~~~~~~~~~------------- 320 (446)
+++.+....... .+.+ ..+. + ..+++++ .++.|+.+|.++|+.+-.+......
T Consensus 140 TG~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~ 217 (599)
T 1w6s_A 140 TGETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKN 217 (599)
T ss_dssp TCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTC
T ss_pred CCCEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccccccc
Confidence 999988776322 1211 1111 3 4555554 3789999999999998776532111
Q ss_pred -------------------------eeEEEECCCCCEEEEEeCC----------------CcEEEEEccCCCcceEEEec
Q 013282 321 -------------------------SFASAWHPNGVTFATGNQD----------------KTCRIWDLRNLSESVAVLKG 359 (446)
Q Consensus 321 -------------------------v~~~~~~p~~~~l~sgs~d----------------~~v~iwd~~~~~~~~~~~~~ 359 (446)
-...++.+...+++.++.+ +.|..+|.++ ++.+-.++.
T Consensus 218 ~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~T-G~~~W~~q~ 296 (599)
T 1w6s_A 218 PHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADT-GEAKFGYQK 296 (599)
T ss_dssp GGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTT-CCEEEEEES
T ss_pred ccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCC-CceeeEeec
Confidence 0134566777777777655 3799999976 776666554
Q ss_pred CCC----------ceEEEEEc-cCC---CEEEEEeCCCeEEEEEcCCCeeEeEee
Q 013282 360 NLG----------AIRSIRYT-SDG---RYMATAEPADFVHVYDVKSGYEKEQEI 400 (446)
Q Consensus 360 ~~~----------~v~~l~~s-~dg---~~l~~~~~dg~i~iwd~~~~~~~~~~~ 400 (446)
... ++ -+... .+| +.++.++.+|.++++|..+|+.+....
T Consensus 297 ~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp STTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 211 12 12222 567 467778999999999999998776543
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.33 E-value=0.00052 Score=60.77 Aligned_cols=191 Identities=7% Similarity=0.031 Sum_probs=118.1
Q ss_pred eEEEEEe--CCc-EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~--~~~-~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.++.+++ +++ ++++...++.|...++. +.... ........-...|++ .+++. ++++.-.++.+.++++...
T Consensus 28 ~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~--~i~l~g~~D~EGIa~--~~~g~-~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 28 NISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR--TIPLDFVKDLETIEY--IGDNQ-FVISDERDYAIYVISLTPN 101 (255)
T ss_dssp CEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE--EEECSSCSSEEEEEE--CSTTE-EEEEETTTTEEEEEEECTT
T ss_pred CcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE--EEecCCCCChHHeEE--eCCCE-EEEEECCCCcEEEEEcCCC
Confidence 5888888 344 55557778888888886 44332 221122234556666 67764 5566556788999887543
Q ss_pred e---eeEeee-------CCCCeeEEEECCCCCEEEEEecCCcEEEEECC---CCceEEEec-------CCCCceeEEEEC
Q 013282 268 Q---LSKHFR-------FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM---TGKTIASLC-------GHLDFSFASAWH 327 (446)
Q Consensus 268 ~---~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~---~~~~~~~~~-------~~~~~v~~~~~~ 327 (446)
. .+.... .......++|+|.++.|+++.......||... ....+..+. .+...+.+++++
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 3 222222 23345899999999888777665444444432 111222221 133457899999
Q ss_pred C-CCCEEEEEeCCCcEEEEEccCCCcceEEEecCC---------CceEEEEEccCCCEEEEEeCCCeEEEEEc
Q 013282 328 P-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGNL---------GAIRSIRYTSDGRYMATAEPADFVHVYDV 390 (446)
Q Consensus 328 p-~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~---------~~v~~l~~s~dg~~l~~~~~dg~i~iwd~ 390 (446)
| .+++++.....+.+.++|.. ++.+..+.-.. ...-.|+|.++|+..++ +..+.+++|.-
T Consensus 182 p~tg~lliLS~~s~~L~~~d~~--g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 182 QQKNTLLVLSHESRALQEVTLV--GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRFTP 251 (255)
T ss_dssp TTTTEEEEEETTTTEEEEECTT--CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEEEC
T ss_pred CCCCeEEEEECCCCeEEEEcCC--CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEEEe
Confidence 9 55666666668889999984 55665554322 25678999999985554 66677777754
No 278
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.31 E-value=0.00038 Score=67.19 Aligned_cols=227 Identities=13% Similarity=0.083 Sum_probs=129.9
Q ss_pred EEEEeC----CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC---C-cEEEEec
Q 013282 193 STLAVK----DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND---C-GVRDFDM 264 (446)
Q Consensus 193 ~~l~~~----~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d---g-~v~iwd~ 264 (446)
..++++ +..|..+...+.|+.+++...... .. .........+++ +++|. ++++.... . .+..++.
T Consensus 142 ~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~---~~-~~~~~~P~giav--d~dG~-lyVad~~~~~~~~gv~~~~~ 214 (433)
T 4hw6_A 142 WRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVD---IK-TTNIGQCADVNF--TLNGD-MVVVDDQSSDTNTGIYLFTR 214 (433)
T ss_dssp CEEEECTTTTTCEEEEECBTSCEEEEETTTTEEE---EE-CCCCSCEEEEEE--CTTCC-EEEEECCSCTTSEEEEEECG
T ss_pred ceEEEccccCCCEEEEEeCCCCEEEEECCCCEEE---Ee-ecCCCCccEEEE--CCCCC-EEEEcCCCCcccceEEEEEC
Confidence 355664 355555554488999988655322 22 223344567766 99998 55554321 1 2333333
Q ss_pred Cccee-eEeeeCCCCeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEe-c-CCCCceeEEEECCCCCEEEEE-eCC
Q 013282 265 GKYQL-SKHFRFPWPVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASL-C-GHLDFSFASAWHPNGVTFATG-NQD 339 (446)
Q Consensus 265 ~~~~~-~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~-~~~~~v~~~~~~p~~~~l~sg-s~d 339 (446)
..+.. ...+..-.....++++| ++.+.++-..++.|+.+|..++.....+ . +....-..++|+|+|+.|+.+ ...
T Consensus 215 ~~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~ 294 (433)
T 4hw6_A 215 ASGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGK 294 (433)
T ss_dssp GGTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTT
T ss_pred CCCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCC
Confidence 22111 11222223456788999 6776666667788999999877763333 2 122233569999999955544 457
Q ss_pred CcEEEEEccCC-Cc--ceEEEecC---------------CCceEEEEE---------ccCCCEEEEEeCCCeEEEEEcCC
Q 013282 340 KTCRIWDLRNL-SE--SVAVLKGN---------------LGAIRSIRY---------TSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 340 ~~v~iwd~~~~-~~--~~~~~~~~---------------~~~v~~l~~---------s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
+.|+.+++... +. ....+.+. -.....+++ .++|.++++-..++.|+.++. +
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~ 373 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-E 373 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-T
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-C
Confidence 78999887421 11 11222221 123567999 777777666667788999985 5
Q ss_pred CeeEeEeecc------------------ccCeEEEEEcCCCCcEEEEEe-cCCcc
Q 013282 393 GYEKEQEIDF------------------FGEISGISFSPDTESLFIGVW-DRTYG 428 (446)
Q Consensus 393 ~~~~~~~~~~------------------~~~v~~~~~spdg~~l~~~~~-D~~~~ 428 (446)
|. +..+.+. .....+|+++|....|+++-. +.+|.
T Consensus 374 G~-v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr 427 (433)
T 4hw6_A 374 GR-VTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVR 427 (433)
T ss_dssp SE-EEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEE
T ss_pred CC-EEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEE
Confidence 63 3333221 134789999954445555543 34443
No 279
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.26 E-value=0.00022 Score=65.41 Aligned_cols=179 Identities=11% Similarity=0.060 Sum_probs=109.0
Q ss_pred eeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCC--cEEEEECCCCceEE
Q 013282 235 TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP--DGLLVDSMTGKTIA 312 (446)
Q Consensus 235 v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~i~d~~~~~~~~ 312 (446)
...+.+ ++++. ++++....+.|..||... +....+.....+..+++.|+|+++++..... .|..+|..+++...
T Consensus 34 pegia~--~~~g~-lyv~d~~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~ 109 (306)
T 2p4o_A 34 LENLAS--APDGT-IFVTNHEVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVET 109 (306)
T ss_dssp EEEEEE--CTTSC-EEEEETTTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEE
T ss_pred cceEEE--CCCCC-EEEEeCCCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEE
Confidence 445555 88876 566666788999999865 3444455556788999999999666554332 47778888877543
Q ss_pred EecC-CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCc-ceEEEe---------cCCCceEEEEEccCCCEEEEEe-
Q 013282 313 SLCG-HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE-SVAVLK---------GNLGAIRSIRYTSDGRYMATAE- 380 (446)
Q Consensus 313 ~~~~-~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~-~~~~~~---------~~~~~v~~l~~s~dg~~l~~~~- 380 (446)
.... .......++..+.+..+++-..++.|..+|... +. .+.... ......+.| +|++++|+.+.
T Consensus 110 ~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~-~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~ 186 (306)
T 2p4o_A 110 LLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQ-PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNT 186 (306)
T ss_dssp EEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTT-TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEET
T ss_pred EEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCC-CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeC
Confidence 3221 122334556566665555555688888888743 21 111111 111234555 88888776555
Q ss_pred CCCeEEEEEcCC-Cee--EeEeeccccCeEEEEEcCCCCcEEEEE
Q 013282 381 PADFVHVYDVKS-GYE--KEQEIDFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 381 ~dg~i~iwd~~~-~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~ 422 (446)
..+.|.+|++.. +.. ...+. ......+++++++|++ +++.
T Consensus 187 ~~~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~l-~va~ 229 (306)
T 2p4o_A 187 EKMLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGNL-YGAT 229 (306)
T ss_dssp TTTEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCCE-EEEC
T ss_pred CCCEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCCE-EEEe
Confidence 567899999875 321 11111 1245678899999965 4443
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.26 E-value=0.0027 Score=60.51 Aligned_cols=211 Identities=9% Similarity=-0.055 Sum_probs=128.6
Q ss_pred EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc----eeeEeee-C
Q 013282 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY----QLSKHFR-F 275 (446)
Q Consensus 201 ~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~----~~~~~~~-~ 275 (446)
+|+.+. ...|+..++...... .+. .....+.++++ ++.+..++++-...+.|+.+++... .....+. .
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~---~~~-~~~~~~~~l~~--d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYT---SLI-PNLRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCE---EEE-CSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS
T ss_pred eeEEec-cceeEEEccCCccee---Eec-cccCcceEEee--eeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC
Confidence 444443 366888888765432 122 22334556666 7766666666667788999998652 2222333 3
Q ss_pred CCCeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC--CCcEEEEEccCCCc
Q 013282 276 PWPVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ--DKTCRIWDLRNLSE 352 (446)
Q Consensus 276 ~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~--d~~v~iwd~~~~~~ 352 (446)
......+++.+. +++.++-...+.|.+.++........+.........+++.|.+..|+.... .+.|...++. +.
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d--G~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT--SC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC--CC
Confidence 345788999884 444455566788999998765544444444456789999996555555443 3678888884 33
Q ss_pred ceEEE-ecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeec---cccCeEEEEEcCCCCcEEEEEe
Q 013282 353 SVAVL-KGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID---FFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 353 ~~~~~-~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~spdg~~l~~~~~ 423 (446)
....+ .......+.|+++|++..|+.+. ..+.|..+|+..... ..+.. ......++++ ++..|+.+-+
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v--~~~~lywtd~ 308 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAV--FEDKVFWTDI 308 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEE--ETTEEEEEES
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEE--eCCEEEEecC
Confidence 33333 33345788999999888777765 467899999875432 22322 2344567776 3445655543
No 281
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.24 E-value=0.00038 Score=64.15 Aligned_cols=188 Identities=12% Similarity=0.185 Sum_probs=122.2
Q ss_pred EEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCC----CCE--EEEEe--c--CCcEEEEEC--CCCceEEEecC
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPD----GKL--LIIVG--D--NPDGLLVDS--MTGKTIASLCG 316 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~----~~~--l~~~~--~--d~~i~i~d~--~~~~~~~~~~~ 316 (446)
+++.....+.+.+||+ +++.+..+.. ..++.+.+-|. |+. ++.++ . +++|.+|++ .++. +..+..
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~i~~ 118 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQSMTD 118 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEECSC
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eeeccc
Confidence 4666678889999999 8888888764 56888887762 222 33333 3 578999966 3443 555422
Q ss_pred ------CC-CceeEEEE--CCC-CC-EEEEEeCCCcEEEEEccCC------CcceEEEecCCCceEEEEEccCCCEEEEE
Q 013282 317 ------HL-DFSFASAW--HPN-GV-TFATGNQDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATA 379 (446)
Q Consensus 317 ------~~-~~v~~~~~--~p~-~~-~l~sgs~d~~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~s~dg~~l~~~ 379 (446)
.. ..++.+|+ +|. +. ++++...+|.+..|++... .+.++++.. .+.+..+...+...+|+.+
T Consensus 119 ~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~Lyv~ 197 (355)
T 3amr_A 119 PDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRLYIA 197 (355)
T ss_dssp TTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEEEEE
T ss_pred cccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeEEEe
Confidence 11 45677888 774 54 5777778899999998431 245666665 3568888899988899999
Q ss_pred eCCCeEEEEEcC-----CCeeEeEee-c-cccCeEEEEE--cCCCC-cEEEEEecCCcceEEEEecccCceec
Q 013282 380 EPADFVHVYDVK-----SGYEKEQEI-D-FFGEISGISF--SPDTE-SLFIGVWDRTYGSLLEYGRCRNYSYL 442 (446)
Q Consensus 380 ~~dg~i~iwd~~-----~~~~~~~~~-~-~~~~v~~~~~--spdg~-~l~~~~~D~~~~~~l~~~~~~~~~~l 442 (446)
..+.-|..++.. ++..+..+. + ....+.+|++ .++|+ +|++++... ..+..|.+...+.|+
T Consensus 198 eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~--~s~~Vydr~~~~~~v 268 (355)
T 3amr_A 198 EEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGN--SSYAIYDRQGKNKYV 268 (355)
T ss_dssp ETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGG--TEEEEEESSTTCCEE
T ss_pred cccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCC--CEEEEEECCCCCcEE
Confidence 998778888855 233443331 2 2246888888 56666 677666443 334445444344443
No 282
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.23 E-value=0.00016 Score=75.26 Aligned_cols=189 Identities=13% Similarity=0.080 Sum_probs=105.8
Q ss_pred EEEE-eCCcEEEEecc-C----CcEEEEEcCCC-CeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC----CcEEE
Q 013282 193 STLA-VKDKLLVAGGF-Q----GELICKHLDRP-GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRD 261 (446)
Q Consensus 193 ~~l~-~~~~~l~tg~~-d----g~i~vw~~~~~-~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d----g~v~i 261 (446)
.+++ ++|++||.+.. + .+|+++++.++ .... ..+ . .....+ .|+|+|+.++++.... ..|+.
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~-~---~~~~~~--~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKV-S---GTNGEI--VWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCE-E---EECSCC--EECSSTTEEEEEEECTTCCEEEEEE
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccc-c---CceeeE--EEecCCCEEEEEEECCCCCCCEEEE
Confidence 4566 67888886543 2 35999999876 4211 001 0 112233 4599998766665322 36888
Q ss_pred EecCccee--eEeee--CCCCeeEEEECCCCCEEEEEe---cCCcEEEEECCCCc-eE--EEe-cCCCCceeEEEECCCC
Q 013282 262 FDMGKYQL--SKHFR--FPWPVNHSSQSPDGKLLIIVG---DNPDGLLVDSMTGK-TI--ASL-CGHLDFSFASAWHPNG 330 (446)
Q Consensus 262 wd~~~~~~--~~~~~--~~~~v~~~~~sp~~~~l~~~~---~d~~i~i~d~~~~~-~~--~~~-~~~~~~v~~~~~~p~~ 330 (446)
+++.+++. ...+. .......+.|+|||++|+..+ ....|+++|+.++. .. ..+ ........++.|+..+
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~ 331 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS 331 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC
Confidence 88877542 22332 233456789999999987765 34568889998752 22 333 3344556666665544
Q ss_pred CEEEEEeCC--C--cEEEEEccCCCcceEE-EecCCC--ceEEEEEccCCCEEEEEeCCCe--EEEEEc
Q 013282 331 VTFATGNQD--K--TCRIWDLRNLSESVAV-LKGNLG--AIRSIRYTSDGRYMATAEPADF--VHVYDV 390 (446)
Q Consensus 331 ~~l~sgs~d--~--~v~iwd~~~~~~~~~~-~~~~~~--~v~~l~~s~dg~~l~~~~~dg~--i~iwd~ 390 (446)
.+++....+ + .|..+|+... ..... +..+.. .+..+.+. .+.++++...++. |.++++
T Consensus 332 ~l~~~t~~~~a~~~~L~~~d~~~~-~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 332 HLVILTNEGGAVNHKLLIAPRGQP-SDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEEECTTTCTTCEEEEEETTST-TCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEEC
T ss_pred EEEEEeCCCCCCCcEEEEEcCCCc-ccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEec
Confidence 444554444 3 5666666431 22223 333333 34455554 2334455666775 566675
No 283
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.18 E-value=0.0015 Score=60.13 Aligned_cols=205 Identities=8% Similarity=-0.015 Sum_probs=123.2
Q ss_pred CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee-Eeee-CCCCeeEEEEC
Q 013282 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS-KHFR-FPWPVNHSSQS 285 (446)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~-~~~~-~~~~v~~~~~s 285 (446)
...|+..++.......... ... ....+.+.|.+.+..++.+-...+.|..+++...... ..+. .-.....+++.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~-~~~---~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd 87 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIV-VGG---LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACD 87 (318)
T ss_dssp EEEEEEEETTCTTSCCEEE-EEE---EEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEE
T ss_pred cCeEEEEECCCCceEEEEE-ecC---CCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEE
Confidence 3568888887654211111 111 1123344447766656777777889999998765321 1222 22356788898
Q ss_pred CCCC-EEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC--CCcEEEEEccCCCcceEEE-ecCC
Q 013282 286 PDGK-LLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ--DKTCRIWDLRNLSESVAVL-KGNL 361 (446)
Q Consensus 286 p~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~--d~~v~iwd~~~~~~~~~~~-~~~~ 361 (446)
+.+. +.++-...+.|.++++........+.........+++.|.+..|+.... .+.|...++. +.....+ ...-
T Consensus 88 ~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d--G~~~~~~~~~~l 165 (318)
T 3sov_A 88 WLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD--GSSRFIIINSEI 165 (318)
T ss_dssp TTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT--SCSCEEEECSSC
T ss_pred cCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC--CCCeEEEEECCC
Confidence 7554 4455556788999998754333333344456789999996555555543 5778888874 3333333 2334
Q ss_pred CceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEee-ccccCeEEEEEcCCCCcEEEE
Q 013282 362 GAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEI-DFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 362 ~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~ 421 (446)
...+.|+|+|++..|+.+. ..+.|..+|+.... ...+. .......++++. +..|+.+
T Consensus 166 ~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~~~~P~glav~--~~~lywt 224 (318)
T 3sov_A 166 YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGSLPHPFALTLF--EDILYWT 224 (318)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSCCSCEEEEEEE--TTEEEEE
T ss_pred CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCCCCCceEEEEe--CCEEEEE
Confidence 4678999999777776665 46789999987432 22232 234556777775 3355544
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.11 E-value=0.0037 Score=57.56 Aligned_cols=150 Identities=11% Similarity=0.108 Sum_probs=103.0
Q ss_pred CCcEEEEEcCCCCeeeEEEEe------ecCCCceeeEEEEeCCC-CCeEEEEEeCCCcEEEEec-------CcceeeEee
Q 013282 208 QGELICKHLDRPGVSFCSRTT------YDDNAITNAVEIYGSPS-GAVHFTASNNDCGVRDFDM-------GKYQLSKHF 273 (446)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~------~~~~~~v~~i~~~~s~~-~~~~l~s~s~dg~v~iwd~-------~~~~~~~~~ 273 (446)
+++|.+|+++...... .... ......+..++++.+|. +..++++...+|.+..|++ .+.+.+++|
T Consensus 98 ~n~l~vf~iDp~~~~l-~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGTL-QSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCCE-EECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCce-eeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999885322111 1110 01114456677776775 4456778888999999988 346778888
Q ss_pred eCCCCeeEEEECCCCCEEEEEecCCcEEEEECC-----CCceEEEec-CC-CCceeEEEE--CCCCC-EEEEEeC-CCcE
Q 013282 274 RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM-----TGKTIASLC-GH-LDFSFASAW--HPNGV-TFATGNQ-DKTC 342 (446)
Q Consensus 274 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~-----~~~~~~~~~-~~-~~~v~~~~~--~p~~~-~l~sgs~-d~~v 342 (446)
.....+..+...+....|+++-.+..|..++.. +++.+..+. ++ ...+..|++ .++++ +|+++++ +.+.
T Consensus 177 ~lgsq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~ 256 (355)
T 3amr_A 177 KMNSQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSY 256 (355)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEE
T ss_pred cCCCCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEE
Confidence 888889999999988999999998778888865 345565553 22 236788888 45555 6666664 7799
Q ss_pred EEEEccCCCcceEEEe
Q 013282 343 RIWDLRNLSESVAVLK 358 (446)
Q Consensus 343 ~iwd~~~~~~~~~~~~ 358 (446)
.+||.....+.+..+.
T Consensus 257 ~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 257 AIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEESSTTCCEEEEEE
T ss_pred EEEECCCCCcEEEEEE
Confidence 9999964456666664
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=0.0014 Score=63.65 Aligned_cols=227 Identities=12% Similarity=0.089 Sum_probs=123.2
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCC-CceeeEEEEe-------CCCCCeEEEEEeCCC------cEEEEec
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDN-AITNAVEIYG-------SPSGAVHFTASNNDC------GVRDFDM 264 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~-~~v~~i~~~~-------s~~~~~~l~s~s~dg------~v~iwd~ 264 (446)
++++++-...+.|++.|+...... .+..... ..-....+.| +++|..++++...++ .|.+++.
T Consensus 152 ~~Lyv~~~~~~~i~~ID~~~~~v~---~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r 228 (496)
T 3kya_A 152 DHLYICYDGHKAIQLIDLKNRMLS---SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKR 228 (496)
T ss_dssp EEEEEEEETEEEEEEEETTTTEEE---EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEEC
T ss_pred CEEEEEECCCCeEEEEECCCCEEE---EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEec
Confidence 344444444567888887665433 2221111 1212344556 788885555544432 2666653
Q ss_pred Cc-ceee-----EeeeCCCCeeEEEECCC-CCEEEEEecCCcEEEEECC-------CCce-----------EEE-ec-CC
Q 013282 265 GK-YQLS-----KHFRFPWPVNHSSQSPD-GKLLIIVGDNPDGLLVDSM-------TGKT-----------IAS-LC-GH 317 (446)
Q Consensus 265 ~~-~~~~-----~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~-------~~~~-----------~~~-~~-~~ 317 (446)
.. +... ..+..-.....++++|+ +.++++-..++.|+.+|+. ++.. ... +. +.
T Consensus 229 ~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~ 308 (496)
T 3kya_A 229 NADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIAD 308 (496)
T ss_dssp CTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSS
T ss_pred CCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCC
Confidence 33 2221 12221123457788994 5555666678889999987 5543 112 11 22
Q ss_pred CCceeEEEECCCCCEEEEE-eCCCcEEEEEccCCCcce---EEEecC---C------------CceE-EEEEc-------
Q 013282 318 LDFSFASAWHPNGVTFATG-NQDKTCRIWDLRNLSESV---AVLKGN---L------------GAIR-SIRYT------- 370 (446)
Q Consensus 318 ~~~v~~~~~~p~~~~l~sg-s~d~~v~iwd~~~~~~~~---~~~~~~---~------------~~v~-~l~~s------- 370 (446)
....+.++|+|+|++|+.+ +....|+.++.......+ .++.+. . .... .++..
T Consensus 309 ~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~ 388 (496)
T 3kya_A 309 PSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGE 388 (496)
T ss_dssp SSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSS
T ss_pred CCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEcccccccc
Confidence 3445789999999965444 557789887763212111 233221 1 1233 44554
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCeeEeEeecc------------------------ccCeEEEEEcCCCCcEEEEE-ecC
Q 013282 371 SDGRYMATAEPADFVHVYDVKSGYEKEQEIDF------------------------FGEISGISFSPDTESLFIGV-WDR 425 (446)
Q Consensus 371 ~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~------------------------~~~v~~~~~spdg~~l~~~~-~D~ 425 (446)
++|.++++=..++.|+.++ .+|. +.++.+. .....+|++++++..|+++- .+.
T Consensus 389 ~~g~lyVaD~~N~rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~ 466 (496)
T 3kya_A 389 EEYDFYFVDRLNFCVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGH 466 (496)
T ss_dssp CCEEEEEEEGGGTEEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTT
T ss_pred CCCeEEEEECCCCEEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCC
Confidence 4566666666778899998 4563 3333321 12477899999734455554 344
Q ss_pred CcceE
Q 013282 426 TYGSL 430 (446)
Q Consensus 426 ~~~~~ 430 (446)
+|+.+
T Consensus 467 rIrki 471 (496)
T 3kya_A 467 TIRTI 471 (496)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 44433
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0038 Score=64.73 Aligned_cols=212 Identities=9% Similarity=-0.070 Sum_probs=126.6
Q ss_pred EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc----eeeEeee-C
Q 013282 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY----QLSKHFR-F 275 (446)
Q Consensus 201 ~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~----~~~~~~~-~ 275 (446)
+|+... ...|+..++...... .+... ...+.++++ .+.+..++++-...+.|+.+++... .....+. .
T Consensus 397 ~Ll~an-~~~Ir~i~l~~~~~~---~l~~~-~~~~~gl~~--d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~ 469 (791)
T 3m0c_C 397 YLFFTN-RHEVRKMTLDRSEYT---SLIPN-LRNVVALDT--EVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD 469 (791)
T ss_dssp EEEEEC-BSSEEEECTTSCCCE---EEECS-CSSEEEEEE--ETTTTEEEEEETTTTEEEEEEC--------CEEEECSS
T ss_pred cccccc-ccceeEeeccCCcce---eeecC-CCceEEEee--cccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecC
Confidence 444443 345777777655432 22222 334456666 6766656777777788999998753 2222333 3
Q ss_pred CCCeeEEEECCCCCEE-EEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC--CCcEEEEEccCCCc
Q 013282 276 PWPVNHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ--DKTCRIWDLRNLSE 352 (446)
Q Consensus 276 ~~~v~~~~~sp~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~--d~~v~iwd~~~~~~ 352 (446)
......|++.+.+..| ++-...+.|.+.++........+.........|++.|.+.+|+.... .+.|...++. +.
T Consensus 470 l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d--G~ 547 (791)
T 3m0c_C 470 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--GV 547 (791)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SC
T ss_pred CCCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC--CC
Confidence 3456789998877555 45556789999998755443334344456789999997555555443 2678888884 33
Q ss_pred ceEEE-ecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeec--cccCeEEEEEcCCCCcEEEEEe
Q 013282 353 SVAVL-KGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEID--FFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 353 ~~~~~-~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~--~~~~v~~~~~spdg~~l~~~~~ 423 (446)
....+ .......+.|++++.+..|+.+. ..+.|..+++........+.. ......+|++. +.+|+.+-+
T Consensus 548 ~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 548 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp CEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred ceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 33333 33345788999998777777665 456899999865433322222 12344566653 446666543
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.08 E-value=0.00032 Score=67.77 Aligned_cols=144 Identities=16% Similarity=0.095 Sum_probs=93.1
Q ss_pred CeeEEEECC-CCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC-CC----cEEEEEccCCC
Q 013282 278 PVNHSSQSP-DGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ-DK----TCRIWDLRNLS 351 (446)
Q Consensus 278 ~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~-d~----~v~iwd~~~~~ 351 (446)
....++++| ++..|.++...+.|+.+|+.+++...... .......++|+++|++|+.+.. ++ .+.+.+.....
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 457889998 45666666555889999998776544333 4456789999999996666554 22 23334432211
Q ss_pred cceEEEecCCCceEEEEEcc-CCCEEEEEeCCCeEEEEEcCCCeeEeEee-ccccCeEEEEEcCCCCcEEEEEe
Q 013282 352 ESVAVLKGNLGAIRSIRYTS-DGRYMATAEPADFVHVYDVKSGYEKEQEI-DFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 352 ~~~~~~~~~~~~v~~l~~s~-dg~~l~~~~~dg~i~iwd~~~~~~~~~~~-~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
.....+.. ......++++| +|.++++-..++.|..|+..++....... .......+++|+|+|++|+++..
T Consensus 217 ~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~ 289 (430)
T 3tc9_A 217 KVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVV 289 (430)
T ss_dssp CSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEET
T ss_pred eeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEEC
Confidence 11133332 23466889999 67766666678899999998765422221 12245789999999997777643
No 288
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.07 E-value=2.5e-05 Score=80.37 Aligned_cols=215 Identities=8% Similarity=-0.056 Sum_probs=119.3
Q ss_pred EEEEe--CCcEE-EEeccCCcEEEEEcCCCCe-eeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 193 STLAV--KDKLL-VAGGFQGELICKHLDRPGV-SFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 193 ~~l~~--~~~~l-~tg~~dg~i~vw~~~~~~~-~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
..+++ .++.| ++-...+.|..+++..... .....+..........+++ .+.+..++++-...+.|.++++....
T Consensus 409 ~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glav--D~~~g~LY~tD~~~~~I~v~d~dg~~ 486 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAV--DWIHSNIYWTDSVLGTVSVADTKGVK 486 (699)
T ss_dssp CCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEEC--CCSSSBCEECCTTTSCEEEEBSSSCC
T ss_pred EEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEE--EeeCCcEEEEeccCCeEEEEecCCCc
Confidence 34455 34444 4445567898888865110 0000111111122345555 55555456665677889999987655
Q ss_pred eeEeee-CCCCeeEEEECCCCCEEEEEec--CCcEEEEECCCCceEEEecCCCCceeEEEECCCCC-EEEEEeCCCcEEE
Q 013282 269 LSKHFR-FPWPVNHSSQSPDGKLLIIVGD--NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGV-TFATGNQDKTCRI 344 (446)
Q Consensus 269 ~~~~~~-~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~-~l~sgs~d~~v~i 344 (446)
....+. .......+++.|.+.+|+.+.. .+.|..+++........+.........|+|+|++. ++++-+..+.|..
T Consensus 487 ~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~ 566 (699)
T 1n7d_A 487 RKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISS 566 (699)
T ss_dssp EEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEE
T ss_pred eEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEE
Confidence 444333 2245678899996665554432 36788777653222222222234567899999654 4455555778999
Q ss_pred EEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEc
Q 013282 345 WDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFS 412 (446)
Q Consensus 345 wd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s 412 (446)
+++.. .....+.. .......|++..+ .++++....+.|..++..+++.+..+......+.+|++.
T Consensus 567 ~d~dG--~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~ 634 (699)
T 1n7d_A 567 IDVNG--GNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 634 (699)
T ss_dssp ECSSS--SCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBC
T ss_pred EccCC--CceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEe
Confidence 99843 32333321 1223445666544 344455567889999988887766654433344555443
No 289
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.05 E-value=0.015 Score=58.82 Aligned_cols=199 Identities=6% Similarity=-0.064 Sum_probs=123.9
Q ss_pred EEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
...+++ ++.++++-..++.|..++++..... .+..........+++ .+.+..++++-...+.|.+.++....
T Consensus 39 ~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~---~v~~~g~~~P~GlAv--D~~~~~LY~tD~~~~~I~v~~~dG~~ 113 (628)
T 4a0p_A 39 ASALDFDVTDNRIYWTDISLKTISRAFMNGSALE---HVVEFGLDYPEGMAV--DWLGKNLYWADTGTNRIEVSKLDGQH 113 (628)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSTT
T ss_pred eEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE---EEEeCCCCCcceEEE--EeCCCEEEEEECCCCEEEEEecCCCc
Confidence 566777 4556666677888988888654332 222222234566777 55556566776777889999987544
Q ss_pred eeEee-eCCCCeeEEEECCCCCEEEEEe--cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe-CCCcEEE
Q 013282 269 LSKHF-RFPWPVNHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRI 344 (446)
Q Consensus 269 ~~~~~-~~~~~v~~~~~sp~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~i 344 (446)
....+ ..-.....+++.|....|..+. ..+.|...++........+ ........+++++++..|+.+. ..+.|..
T Consensus 114 ~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~-~~~~~P~GlalD~~~~~LY~aD~~~~~I~~ 192 (628)
T 4a0p_A 114 RQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLV-PNVGRANGLTIDYAKRRLYWTDLDTNLIES 192 (628)
T ss_dssp CEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEE-CCCCCcceEEEccccCEEEEEECCCCEEEE
Confidence 33333 2334578999999655565554 3567888887644333223 3445678999999766665554 5678999
Q ss_pred EEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEe
Q 013282 345 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 399 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~ 399 (446)
.|+.. .. ...+........+|++.. ++.+++-...+.|...|..++.....+
T Consensus 193 ~d~dG-~~-~~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 193 SNMLG-LN-REVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EETTS-CS-CEEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EcCCC-Cc-eEEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 99854 22 244444344456788765 344444445788999998777544333
No 290
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=98.02 E-value=0.0015 Score=59.57 Aligned_cols=155 Identities=8% Similarity=0.010 Sum_probs=107.2
Q ss_pred eeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEe-eeC-------CCCeeEEEE---CCCCCEEEEEec-------
Q 013282 235 TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKH-FRF-------PWPVNHSSQ---SPDGKLLIIVGD------- 296 (446)
Q Consensus 235 v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~-~~~-------~~~v~~~~~---sp~~~~l~~~~~------- 296 (446)
..+++| .+....++++.-..++|..|+...+..... +.. ...+..+.| .|+++++++...
T Consensus 15 PE~~~w--d~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 15 PEDTIY--DRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CSCEEE--ETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CcCccC--cCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 345555 666665555555789999999976544333 221 113578999 688777775431
Q ss_pred ------CCcEEEEECC---CCceEEEec--C-----------CCCceeEEEECCCCCEEEEEeCC-CcEEEEEccCCCcc
Q 013282 297 ------NPDGLLVDSM---TGKTIASLC--G-----------HLDFSFASAWHPNGVTFATGNQD-KTCRIWDLRNLSES 353 (446)
Q Consensus 297 ------d~~i~i~d~~---~~~~~~~~~--~-----------~~~~v~~~~~~p~~~~l~sgs~d-~~v~iwd~~~~~~~ 353 (446)
+..|..+|+. +++.+.... . -......++..++|+..++++.- +.|...+.. ++.
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd--G~~ 170 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD--GKT 170 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT--SCC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC--CCE
Confidence 5779999999 887765543 1 11247899999999999999988 877777763 333
Q ss_pred eEEEec------CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC
Q 013282 354 VAVLKG------NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG 393 (446)
Q Consensus 354 ~~~~~~------~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~ 393 (446)
+..+.. .....+.|+++|+|+.|++....|.|..+|+.+.
T Consensus 171 ~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 171 VSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred EeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 333221 1223679999999999988877999999998854
No 291
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.98 E-value=0.014 Score=58.99 Aligned_cols=213 Identities=10% Similarity=-0.001 Sum_probs=132.3
Q ss_pred EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC-CCCe
Q 013282 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF-PWPV 279 (446)
Q Consensus 201 ~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~-~~~v 279 (446)
+|+.+ ....|+..++....... ......-..+.++++ ++.+..++++-...+.|+.+++........+.. -...
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~--~~~~~~~~~~~~l~~--d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P 82 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNV--AIPLTGVKEASALDF--DVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYP 82 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEE--ECCCCSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCC
T ss_pred EEEEE-eCCcEEEEECCCCCcce--EEEcCCCCceEEEEE--ECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCc
Confidence 44443 45678888887654321 111111223445555 787776777777789999999876544444432 2457
Q ss_pred eEEEECCCCCEE-EEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeC--CCcEEEEEccCCCcceEE
Q 013282 280 NHSSQSPDGKLL-IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQ--DKTCRIWDLRNLSESVAV 356 (446)
Q Consensus 280 ~~~~~sp~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~--d~~v~iwd~~~~~~~~~~ 356 (446)
..+++.+.+..| ++-...+.|.+.++........+.........+++.|....|+.... .+.|...++. +.....
T Consensus 83 ~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--G~~~~~ 160 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--GSERTT 160 (628)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT--SCSCEE
T ss_pred ceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC--CCceEE
Confidence 789998765555 55556788999998754433333334456789999995445554443 4677777774 343444
Q ss_pred EecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 357 LKGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 357 ~~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
+.........|+++++++.|+.+. ..+.|..+|+..... ..+........++++.. ..|+.+-+
T Consensus 161 l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~ 225 (628)
T 4a0p_A 161 LVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDW 225 (628)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEET
T ss_pred EECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecC
Confidence 444456788999999877777665 467899999876433 33333444566787764 46666544
No 292
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.97 E-value=0.00074 Score=65.21 Aligned_cols=150 Identities=15% Similarity=0.121 Sum_probs=92.0
Q ss_pred eeEEEEeCCC--CCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCC-----cEEEEECCCC
Q 013282 236 NAVEIYGSPS--GAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP-----DGLLVDSMTG 308 (446)
Q Consensus 236 ~~i~~~~s~~--~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~i~d~~~~ 308 (446)
..+.+ +|+ +.. |+.+...+.|+.+++.+++.............++++++|+ |+++...+ .+..++...+
T Consensus 142 ~gvav--d~~s~~g~-Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 142 WRMMF--DPNSNYDD-LYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CEEEE--CTTTTTCE-EEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred ceEEE--ccccCCCE-EEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 45555 874 343 4444333899999998888766655555689999999999 44444321 2333333222
Q ss_pred ce-EEEecCCCCceeEEEECC-CCCEEEEEeCCCcEEEEEccCCCcceEEE-e-cCCCceEEEEEccCCCEEEEEe-CCC
Q 013282 309 KT-IASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVL-K-GNLGAIRSIRYTSDGRYMATAE-PAD 383 (446)
Q Consensus 309 ~~-~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v~iwd~~~~~~~~~~~-~-~~~~~v~~l~~s~dg~~l~~~~-~dg 383 (446)
.. ...+. .......++++| +|.++++-..++.|+.+|... +.....+ . +.......++|+|+|++|+.+. ..+
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~-g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~ 295 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPAT-GTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKH 295 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTT-CCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTT
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCC-CeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCC
Confidence 11 11122 223456788999 777666666778899999853 3332222 2 1122334699999999665555 567
Q ss_pred eEEEEEcC
Q 013282 384 FVHVYDVK 391 (446)
Q Consensus 384 ~i~iwd~~ 391 (446)
.|+.+++.
T Consensus 296 ~I~~~~~d 303 (433)
T 4hw6_A 296 CIYRVDYN 303 (433)
T ss_dssp EEEEEEBC
T ss_pred EEEEEeCC
Confidence 89998865
No 293
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.93 E-value=0.013 Score=54.05 Aligned_cols=222 Identities=12% Similarity=0.053 Sum_probs=117.3
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEee-cCCCceeeEEEEeCCCCCeEEEEEeCCCcEE-EEec-Ccc
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASNNDCGVR-DFDM-GKY 267 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~-~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~-iwd~-~~~ 267 (446)
.+.++.++++.+++++..|.|.. ....+......... ...+.+..+.+ .+++. +++++ .+|.|. -.|- .+.
T Consensus 81 ~~~~i~~~~~~~~~~g~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~--~~~~~-~~~~~-~~g~v~~S~DgG~tW 154 (327)
T 2xbg_A 81 RFNSVSFQGNEGWIVGEPPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKA--LGNGS-AEMIT-NVGAIYRTKDSGKNW 154 (327)
T ss_dssp EEEEEEEETTEEEEEEETTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEE--EETTE-EEEEE-TTCCEEEESSTTSSE
T ss_pred cEEEEEecCCeEEEEECCCeEEE--ECCCCCCceECccccCCCCCeEEEEE--ECCCC-EEEEe-CCccEEEEcCCCCCC
Confidence 57777774455555666774433 32323222111111 11223444444 44443 44444 556543 2331 122
Q ss_pred eeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEE-EC--CCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEE
Q 013282 268 QLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLV-DS--MTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRI 344 (446)
Q Consensus 268 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~-d~--~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~i 344 (446)
+.+.. .....+..+.+.|++.+++++. .+.++.- |- .+-+.+. ......+..+++.|++.+++ ++.+|.+++
T Consensus 155 ~~~~~-~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~ 229 (327)
T 2xbg_A 155 QALVQ-EAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDGRLWM-IVNGGKIAF 229 (327)
T ss_dssp EEEEC-SCCCCEEEEEECTTSCEEEEET-TSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTSCEEE-EETTTEEEE
T ss_pred EEeec-CCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCCCCCceeECC--CCCCCccceeEECCCCCEEE-EeCCceEEE
Confidence 22211 2445688999999888776654 4555443 32 2223332 23456788999999887664 456788777
Q ss_pred EEccCCCcceEEEe-c---CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec---cccCeEEEEEcCCCCc
Q 013282 345 WDLRNLSESVAVLK-G---NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID---FFGEISGISFSPDTES 417 (446)
Q Consensus 345 wd~~~~~~~~~~~~-~---~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~---~~~~v~~~~~spdg~~ 417 (446)
+.... +.....+. + +...+.++++.+++..++++. +|.| ++....|+.-..+.. ....+.++.|.+++.
T Consensus 230 s~~D~-G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~- 305 (327)
T 2xbg_A 230 SDPDN-SENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ- 305 (327)
T ss_dssp EETTE-EEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-
T ss_pred ecCCC-CCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-
Confidence 64211 22222121 1 223588999999888777654 6666 344454543333331 245678899986554
Q ss_pred EEEEEecCCc
Q 013282 418 LFIGVWDRTY 427 (446)
Q Consensus 418 l~~~~~D~~~ 427 (446)
+++++.+|.+
T Consensus 306 ~~~~G~~G~i 315 (327)
T 2xbg_A 306 GFILGQKGIL 315 (327)
T ss_dssp EEEECSTTEE
T ss_pred eEEEcCCceE
Confidence 5566666643
No 294
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.90 E-value=0.012 Score=59.47 Aligned_cols=200 Identities=6% Similarity=-0.024 Sum_probs=114.5
Q ss_pred EEEEEe--CCc-EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcce
Q 013282 192 VSTLAV--KDK-LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQ 268 (446)
Q Consensus 192 v~~l~~--~~~-~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~ 268 (446)
...+++ .++ ++++=...+.|..++++..... ..+..........+++ .+.+..++++-...+.|.+.++....
T Consensus 42 ~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~--~~v~~~~~~~P~GlAv--D~~~~~ly~~d~~~~~I~v~~~dG~~ 117 (619)
T 3s94_A 42 AAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV--QNVVVSGLLSPDGLAC--DWLGEKLYWTDSETNRIEVSNLDGSL 117 (619)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEEC-----C--EEEECSSCSCEEEEEE--ETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred eEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce--EEEEeCCCCCcCeEEE--EecCCEEEEEeCCCCEEEEEECCCCC
Confidence 556666 344 4445555678888887654211 1222222245677777 66666667777778999999997654
Q ss_pred eeEee-eCCCCeeEEEECCCCCEEEEEec--CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEE-eCCCcEEE
Q 013282 269 LSKHF-RFPWPVNHSSQSPDGKLLIIVGD--NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATG-NQDKTCRI 344 (446)
Q Consensus 269 ~~~~~-~~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sg-s~d~~v~i 344 (446)
....+ ..-.....+++.|.+..|..+.. .+.|...++........+...-.....++++|++..|+.+ ...+.|..
T Consensus 118 ~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~ 197 (619)
T 3s94_A 118 RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHK 197 (619)
T ss_dssp CEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEE
T ss_pred EEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEE
Confidence 33333 23345678999997666655543 4677777765333333333334567899999966555555 44678888
Q ss_pred EEccCCCcceEEEecCCCceEEEEEccCCCEEEEE-eCCCeEEEEEcCCCeeEeE
Q 013282 345 WDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATA-EPADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 345 wd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~-~~dg~i~iwd~~~~~~~~~ 398 (446)
.|+.. ........+......+|++..+ .|+.+ ...+.|...|..+++....
T Consensus 198 ~~~dG-~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~ 249 (619)
T 3s94_A 198 SNLDG-TNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLRE 249 (619)
T ss_dssp ESSSC-CEEC---------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEE
T ss_pred ecCCC-CccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEE
Confidence 88843 2222222212223346777665 44444 4567899999887754433
No 295
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.83 E-value=0.012 Score=53.72 Aligned_cols=195 Identities=10% Similarity=0.089 Sum_probs=118.3
Q ss_pred EEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeec----CCCceeeEEEEe---CCCCCeEEEEEe---------
Q 013282 194 TLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYD----DNAITNAVEIYG---SPSGAVHFTASN--------- 254 (446)
Q Consensus 194 ~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~----~~~~v~~i~~~~---s~~~~~~l~s~s--------- 254 (446)
+..| ++.++++.-..|+|..|+...+.... . ...+ ........-+.+ .|.+. ++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~-~-~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~af~~~g 93 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFN-V-VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAKSFNFAD 93 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEE-E-CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETTTTCTTS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEE-E-ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccccccccc
Confidence 4456 35555555589999999986543221 2 2222 122223344555 47754 455433
Q ss_pred ----CCCcEEEEecC---cceeeEeeeCC--------------CCeeEEEECCCCCEEEEEecC-CcEEEEECCCCceEE
Q 013282 255 ----NDCGVRDFDMG---KYQLSKHFRFP--------------WPVNHSSQSPDGKLLIIVGDN-PDGLLVDSMTGKTIA 312 (446)
Q Consensus 255 ----~dg~v~iwd~~---~~~~~~~~~~~--------------~~v~~~~~sp~~~~l~~~~~d-~~i~i~d~~~~~~~~ 312 (446)
.+..|..+|+. +++.+.....+ ...+.+++.++|+..++++.. +.|..++.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 26779999999 78877665521 248899999999999999888 88888886533 333
Q ss_pred Eec-C-----CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEe--cC---CCceEEE-EEccCCCE-EEEE
Q 013282 313 SLC-G-----HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLK--GN---LGAIRSI-RYTSDGRY-MATA 379 (446)
Q Consensus 313 ~~~-~-----~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~--~~---~~~v~~l-~~s~dg~~-l~~~ 379 (446)
.+. . .....+.|+++|+|+.|++....+.+..+|++........+. +. -.....| .--.+|+. |++.
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~ 252 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGA 252 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEE
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEc
Confidence 221 1 122367899999999888887799999999974222001121 21 1123333 33457777 4455
Q ss_pred eCCCeEEEEEcCC
Q 013282 380 EPADFVHVYDVKS 392 (446)
Q Consensus 380 ~~dg~i~iwd~~~ 392 (446)
...+.+.+.+...
T Consensus 253 ~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 253 RAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEECSST
T ss_pred CCCCEEEEECCCC
Confidence 5566666665443
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.81 E-value=0.0058 Score=57.12 Aligned_cols=221 Identities=13% Similarity=0.097 Sum_probs=115.5
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe---ecCCCceeeEEEEeCCC---CCeEEEEEeCC-----Cc
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPS---GAVHFTASNND-----CG 258 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~i~~~~s~~---~~~~l~s~s~d-----g~ 258 (446)
-..|++ +|+++++ ...|.|.+++ ... ....... .........+.+ +|+ +..+.++-... ..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~--~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLAL--HPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEE--CTTTTTSCEEEEEEEECTTSSEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEE--CCCCCCCCEEEEEEecCCCCCccE
Confidence 346666 7775555 5569898888 222 1111111 111233455655 887 55444444332 56
Q ss_pred EEEEecCcce-----ee-EeeeC-C---CCeeEEEECCCCCEEEEEecC-------------CcEEEEECCCC-------
Q 013282 259 VRDFDMGKYQ-----LS-KHFRF-P---WPVNHSSQSPDGKLLIIVGDN-------------PDGLLVDSMTG------- 308 (446)
Q Consensus 259 v~iwd~~~~~-----~~-~~~~~-~---~~v~~~~~sp~~~~l~~~~~d-------------~~i~i~d~~~~------- 308 (446)
|..|++.... .+ ..+.. . .....++|.|+|.+.++.+.. +.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 8888876431 11 11221 1 134689999999866664432 45655655420
Q ss_pred -----ceEEE-ecCCCCceeEEEECC-CCCEEEEEeCCCcE------EEEEccCCC-----------------cceEEEe
Q 013282 309 -----KTIAS-LCGHLDFSFASAWHP-NGVTFATGNQDKTC------RIWDLRNLS-----------------ESVAVLK 358 (446)
Q Consensus 309 -----~~~~~-~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v------~iwd~~~~~-----------------~~~~~~~ 358 (446)
..... ..++. ....++|+| +|.++++-.....+ .|.-+.... .++..+.
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~ 265 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYFWP 265 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEecC
Confidence 00011 12332 346789999 67766654433331 233222211 2333442
Q ss_pred cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCee------EeEeeccccCeEEEEEcCCCCcEEEE
Q 013282 359 GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYE------KEQEIDFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 359 ~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~------~~~~~~~~~~v~~~~~spdg~~l~~~ 421 (446)
. ......++| .+|.++++.-..+.|...++..... ...+....+.+.++++.|||.+.++.
T Consensus 266 ~-~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~ 332 (352)
T 2ism_A 266 Q-GFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTT 332 (352)
T ss_dssp T-CCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEE
T ss_pred C-CCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEE
Confidence 2 334667888 5676666555667788887764321 22333334689999999999655443
No 297
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.79 E-value=0.0014 Score=66.89 Aligned_cols=93 Identities=20% Similarity=0.060 Sum_probs=57.2
Q ss_pred CCCEEEEEecCC-----------cEEEEECCCCceEEEe--cCCCCc-eeEEEECCCCCEEEEEeCC-----------Cc
Q 013282 287 DGKLLIIVGDNP-----------DGLLVDSMTGKTIASL--CGHLDF-SFASAWHPNGVTFATGNQD-----------KT 341 (446)
Q Consensus 287 ~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~--~~~~~~-v~~~~~~p~~~~l~sgs~d-----------~~ 341 (446)
+++++++|+.++ .|.+||..+.+-.... ..+... -.+++..|++++++.|+.+ ..
T Consensus 410 ~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~ 489 (656)
T 1k3i_A 410 KGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFT 489 (656)
T ss_dssp TTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCC
T ss_pred CCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccc
Confidence 567777777432 5778888766543332 112222 2345667899999999864 46
Q ss_pred EEEEEccCCCcceEEEe---cCCCceEEEEEccCCCEEEEEeC
Q 013282 342 CRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEP 381 (446)
Q Consensus 342 v~iwd~~~~~~~~~~~~---~~~~~v~~l~~s~dg~~l~~~~~ 381 (446)
+.+||... .+ ...+. .......+..+.|+|+.++.|+.
T Consensus 490 v~~ydp~t-~~-W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 490 PEIYVPEQ-DT-FYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CEEEEGGG-TE-EEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eEEEcCCC-Cc-eeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 89999854 22 22221 12222334556799999999885
No 298
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.77 E-value=0.021 Score=51.75 Aligned_cols=129 Identities=9% Similarity=0.034 Sum_probs=85.7
Q ss_pred CCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCCCCeeEEEECCC
Q 013282 208 QGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPD 287 (446)
Q Consensus 208 dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~ 287 (446)
..+|.|.|+..+.... .+..... +.-+ +|..+ +++.- ...++.+||+++.+.++.+..+.+|..=.|-..
T Consensus 48 ~~~VvIiDl~n~~~~~-Rrpi~Ad-----sAIM--nP~~~-ViALr-ag~~LQiFnletK~klks~~~~e~VvfWkWis~ 117 (365)
T 2xzh_A 48 QAQVVIIDMNDPSNPI-RRPISAD-----SAIM--NPASK-VIALK-AGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISL 117 (365)
T ss_dssp EEEEEEEETTSTTSCE-EEECCCS-----EEEE--CSSSS-EEEEE-ETTEEEEEETTTTEEEEEEECSSCEEEEEECSS
T ss_pred CCEEEEEECCCCCCcc-ccccccc-----eeee--CCCcc-EEEEe-cCCeEEEechHHhhhhcceecCCccEEEEecCC
Confidence 3478888998876542 2222221 1223 78876 44444 368899999999999999998889998888654
Q ss_pred CCEEEEEecCCcEEEEECCC-CceEEEecCCC----CceeEEEECCCCCEEEEEeC-------CCcEEEEEcc
Q 013282 288 GKLLIIVGDNPDGLLVDSMT-GKTIASLCGHL----DFSFASAWHPNGVTFATGNQ-------DKTCRIWDLR 348 (446)
Q Consensus 288 ~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~----~~v~~~~~~p~~~~l~sgs~-------d~~v~iwd~~ 348 (446)
+.|+..+. ..|+-|++.. ..+++.+..|. ..|..-..+++.++++..+- .|.+.+|...
T Consensus 118 -~~L~lVT~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~e 188 (365)
T 2xzh_A 118 -NTVALVTD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVD 188 (365)
T ss_dssp -SEEEEEES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETT
T ss_pred -CeEEEEcC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeec
Confidence 45555554 4799999873 45666666553 45666677788887665432 3556677663
No 299
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=97.75 E-value=0.024 Score=51.59 Aligned_cols=204 Identities=7% Similarity=-0.026 Sum_probs=116.0
Q ss_pred EEEEEeCCcEEEEeccC--------------CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEE---e
Q 013282 192 VSTLAVKDKLLVAGGFQ--------------GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTAS---N 254 (446)
Q Consensus 192 v~~l~~~~~~l~tg~~d--------------g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~---s 254 (446)
+.-+.+++++|+-.... ..|+..+++..... .+... ... .+ ++.++.+..+. .
T Consensus 57 ~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~---~l~~~---~~~--~~--s~~g~~Iy~~~~~~~ 126 (302)
T 3s25_A 57 AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGST---VLDPD---PCI--YA--SLIGNYIYYLHYDTQ 126 (302)
T ss_dssp EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCE---EEECS---CEE--EE--EEETTEEEEEEESSS
T ss_pred eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcce---EeecC---Ccc--EE--EEeCCEEEEEeecCC
Confidence 55666788888777553 35666666655422 22111 112 23 66777655554 3
Q ss_pred CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEec-CCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEE
Q 013282 255 NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGD-NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 255 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l 333 (446)
....|+..++..........+.. ..++|+++.|...+. ...|+..++..+.....+. +... ..++|++.+|
T Consensus 127 ~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~i 198 (302)
T 3s25_A 127 TATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNV 198 (302)
T ss_dssp SCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEE
T ss_pred CCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEE
Confidence 44556666776544333333322 456788888876665 6788888887665443333 2222 3466988888
Q ss_pred EEEeCCC--cEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeC--CCeEEEEEcCCCeeEeEeeccccCeEEE
Q 013282 334 ATGNQDK--TCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP--ADFVHVYDVKSGYEKEQEIDFFGEISGI 409 (446)
Q Consensus 334 ~sgs~d~--~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 409 (446)
+-....+ .|..-++. +.....+.. ..+ ..|+|++++|+.++. .+.|..-++... ....+... .+.
T Consensus 199 y~t~~~~~~~I~~~~ld--G~~~~~Lt~--~~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~-~r~~l~~~--~~~-- 267 (302)
T 3s25_A 199 YYMDVNRDNAIVHVNIN--NPNPVVLTE--ANI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT-GFKELAKG--EFC-- 267 (302)
T ss_dssp EEEEGGGTTEEEEECSS--SCCCEECSC--SCE--EEEEEETTEEEEEECSSSCEEEEEETTSC-CCEEEEES--CEE--
T ss_pred EEEEcCCCcEEEEEECC--CCCeEEEeC--CCc--ceEEECCCEEEEEECCCCcEEEEEECCCC-ccEEeeCC--ccc--
Confidence 8776543 44444553 444555543 233 347889998887643 356777776543 23333321 233
Q ss_pred EEcCCCCcEEEEEec
Q 013282 410 SFSPDTESLFIGVWD 424 (446)
Q Consensus 410 ~~spdg~~l~~~~~D 424 (446)
.+++.+.+|+-.-+.
T Consensus 268 ~i~i~~d~Iy~td~~ 282 (302)
T 3s25_A 268 NINVTSQYVYFTDFV 282 (302)
T ss_dssp EEEECSSEEEEEETT
T ss_pred eEEEeCCEEEEEECC
Confidence 456677788776543
No 300
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.74 E-value=0.013 Score=54.54 Aligned_cols=207 Identities=12% Similarity=0.089 Sum_probs=116.1
Q ss_pred cCCcEEEEEcCCCCe-eeEEEEeec----CCCceeeEEEEeCCCCCeEEEEE-eC--CCcEEEEecCc--ce--eeEeee
Q 013282 207 FQGELICKHLDRPGV-SFCSRTTYD----DNAITNAVEIYGSPSGAVHFTAS-NN--DCGVRDFDMGK--YQ--LSKHFR 274 (446)
Q Consensus 207 ~dg~i~vw~~~~~~~-~~~~~~~~~----~~~~v~~i~~~~s~~~~~~l~s~-s~--dg~v~iwd~~~--~~--~~~~~~ 274 (446)
.+|.|.++++.+... ......... ..-....+.+....++...|+++ .. ..+|.+|++.. .. .+..+.
T Consensus 81 ~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp -CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 689999999875422 222222211 12345566664443555344444 22 46788887654 22 222333
Q ss_pred C--CCCeeEEEECCCCCEEEEEe-----------------cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEE
Q 013282 275 F--PWPVNHSSQSPDGKLLIIVG-----------------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFAT 335 (446)
Q Consensus 275 ~--~~~v~~~~~sp~~~~l~~~~-----------------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~s 335 (446)
+ -...+.+.+.++|.+.++.. ..|.|+.+|. ++. ..+...-...+.++|+|+++.|+.
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEE
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEE
Confidence 2 23578999999998776653 1245555554 332 233223345689999999988776
Q ss_pred Ee-CCCcEEEEEccCCCcc--eEEEecCCCceEEEEEcc-CCCEEEEEeCC-CeEEEEEcC--CCeeEeEeec---cccC
Q 013282 336 GN-QDKTCRIWDLRNLSES--VAVLKGNLGAIRSIRYTS-DGRYMATAEPA-DFVHVYDVK--SGYEKEQEID---FFGE 405 (446)
Q Consensus 336 gs-~d~~v~iwd~~~~~~~--~~~~~~~~~~v~~l~~s~-dg~~l~~~~~d-g~i~iwd~~--~~~~~~~~~~---~~~~ 405 (446)
+. ..+.|..|++...+.. .+.+ ...+..-.+++.+ +|++.+++..+ +.|..|+.. .+..+.++.. -...
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~ 316 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPK 316 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCE
T ss_pred EeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcE
Confidence 65 4788999998643322 2233 2245677899999 59977766544 345555543 2444444432 1233
Q ss_pred eEEEEEcCCCCcE
Q 013282 406 ISGISFSPDTESL 418 (446)
Q Consensus 406 v~~~~~spdg~~l 418 (446)
+..+ |..+|+.|
T Consensus 317 v~~v-~~ddG~~l 328 (355)
T 3sre_A 317 VTVV-YAENGTVL 328 (355)
T ss_dssp EEEE-EEECSSSC
T ss_pred EEEE-EEcCCCEE
Confidence 4333 44466653
No 301
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.70 E-value=0.0022 Score=60.34 Aligned_cols=142 Identities=18% Similarity=0.256 Sum_probs=95.0
Q ss_pred CCCCCeEEEEEeCCCcEEEEecCcceeeEeeeCC----C-CeeEEEECCCCCEEEEEecCCcEEEEECCCCc--------
Q 013282 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP----W-PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGK-------- 309 (446)
Q Consensus 243 s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~----~-~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~-------- 309 (446)
..+|..++++ .++.||.-++......+.+..+ . .|..+..+|+|++||..+.. .|.|..+..+.
T Consensus 29 ~~n~t~i~~a--~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~-~V~Vv~LP~~~~~~~~~~~ 105 (452)
T 3pbp_A 29 SQNGTRIVFI--QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDN-EIFVMEVPWGYSNVEDVSI 105 (452)
T ss_dssp ETTTTEEEEE--ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSS-EEEEEECCTTCSCCCCHHH
T ss_pred EcCCCEEEEE--ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCC-eEEEEEecCccccCccccc
Confidence 3455543333 4477777777644344444433 2 57889999999999988755 78888886321
Q ss_pred ----eEEEecC------CCCceeEEEECC---CCCEEEEEeCCCcEEEEEccCCC-cceEEEec---------CCCceEE
Q 013282 310 ----TIASLCG------HLDFSFASAWHP---NGVTFATGNQDKTCRIWDLRNLS-ESVAVLKG---------NLGAIRS 366 (446)
Q Consensus 310 ----~~~~~~~------~~~~v~~~~~~p---~~~~l~sgs~d~~v~iwd~~~~~-~~~~~~~~---------~~~~v~~ 366 (446)
..+.+.- ...+|..+.||| .+..|++-..|++||+||+.... .+. .+.. ....|.+
T Consensus 106 ~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S 184 (452)
T 3pbp_A 106 QDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITD 184 (452)
T ss_dssp HHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEE
T ss_pred ccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEE
Confidence 1122221 246799999999 56789999999999999996522 233 3321 2246889
Q ss_pred EEEccCCCEEEEEe--CCCeEEEE
Q 013282 367 IRYTSDGRYMATAE--PADFVHVY 388 (446)
Q Consensus 367 l~~s~dg~~l~~~~--~dg~i~iw 388 (446)
++|.++|-.|...+ ..|.|+-.
T Consensus 185 ~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 185 LEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEEcCCCcEEEEEecCCCCCEEEE
Confidence 99999887666655 78887655
No 302
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.66 E-value=0.038 Score=51.53 Aligned_cols=223 Identities=16% Similarity=0.153 Sum_probs=117.9
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe---ecCCCceeeEEEEeCCC---CCeEEEEEeC---C----
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT---YDDNAITNAVEIYGSPS---GAVHFTASNN---D---- 256 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~---~~~~~~v~~i~~~~s~~---~~~~l~s~s~---d---- 256 (446)
-..|++ +|+++++ ...|.|.+++. .+. ...... .........+.+ +|+ +..+.++-+. +
T Consensus 31 P~~ia~~pdG~l~V~-e~~g~I~~~d~--~G~-~~~~~~~v~~~g~~g~~gia~--~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 31 PWSIAPLGGGRYLVT-ERPGRLVLISP--SGK-KLVASFDVANVGEAGLLGLAL--HPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp EEEEEEEETTEEEEE-ETTTEEEEECS--SCE-EEEEECCCCCSTTCSEEEEEE--CTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CeEEEEcCCCeEEEE-eCCCEEEEEeC--CCc-eEeeccceeecCCCceeeEEe--CCCCCcCCEEEEEEeccCCCCCcc
Confidence 345555 7775554 55698888863 222 111111 111233455655 887 4444444332 3
Q ss_pred CcEEEEecCcc-------eee-Eeee--CCCCeeEEEECCCCCEEEEEecC-------------CcEEEEECCCC-----
Q 013282 257 CGVRDFDMGKY-------QLS-KHFR--FPWPVNHSSQSPDGKLLIIVGDN-------------PDGLLVDSMTG----- 308 (446)
Q Consensus 257 g~v~iwd~~~~-------~~~-~~~~--~~~~v~~~~~sp~~~~l~~~~~d-------------~~i~i~d~~~~----- 308 (446)
..|..|+.... +.+ ..+. .......++|.|+|.+.++.+.. +.|.-++....
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 56777776543 111 1122 11234679999999877765432 45555554321
Q ss_pred ----ceEEEecCCCCceeEEEECC-CCCEEEEEeCCC---cEEEEEccC---------------CCcceEEEecCCCceE
Q 013282 309 ----KTIASLCGHLDFSFASAWHP-NGVTFATGNQDK---TCRIWDLRN---------------LSESVAVLKGNLGAIR 365 (446)
Q Consensus 309 ----~~~~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~---~v~iwd~~~---------------~~~~~~~~~~~~~~v~ 365 (446)
..+. ..++.. ...++|+| +|.++++-.... .|.+...-. ...++..+........
T Consensus 185 pf~~~~i~-a~G~rn-p~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIW-SYGHRN-PQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSTTCCEE-EECCSC-CCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCcEE-EEccCC-cceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 0111 223433 36799999 677665543322 133322100 0123334411234577
Q ss_pred EEEEc-------cCCCEEEEEeCCCeEEEEEcCCC-eeE--eEee-ccccCeEEEEEcCCCCcEEEEEe
Q 013282 366 SIRYT-------SDGRYMATAEPADFVHVYDVKSG-YEK--EQEI-DFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 366 ~l~~s-------~dg~~l~~~~~dg~i~iwd~~~~-~~~--~~~~-~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
.++|. .+|.++++.-..+.|...++... ... ..+. +....+.++++.|||. |+++.+
T Consensus 263 G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp EEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEEC
T ss_pred ceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc-EEEEEe
Confidence 88883 56776666666778999988753 221 2222 2246799999999995 555544
No 303
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.64 E-value=0.017 Score=53.76 Aligned_cols=167 Identities=16% Similarity=0.127 Sum_probs=99.1
Q ss_pred CCCcEEEEecCc--ceeeEeee--C------CCCeeEEEECC--CCC-EEEEE-ec--CCcEEEEECCCC-ce---EEEe
Q 013282 255 NDCGVRDFDMGK--YQLSKHFR--F------PWPVNHSSQSP--DGK-LLIIV-GD--NPDGLLVDSMTG-KT---IASL 314 (446)
Q Consensus 255 ~dg~v~iwd~~~--~~~~~~~~--~------~~~v~~~~~sp--~~~-~l~~~-~~--d~~i~i~d~~~~-~~---~~~~ 314 (446)
.+|.|.++|+.+ ++. ..+. . ......+.+.+ ++. +|+++ .. +..|.+|++..+ .. +..+
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 689999999873 232 2222 1 13566677655 454 34444 32 456777776532 22 2334
Q ss_pred cCC-CCceeEEEECCCCCEEEEEeC---C------------CcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEE
Q 013282 315 CGH-LDFSFASAWHPNGVTFATGNQ---D------------KTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 315 ~~~-~~~v~~~~~~p~~~~l~sgs~---d------------~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~ 378 (446)
.+. -...+.+++.|+|.+.++... | ..-++|-+.. ++ +..+...-...+.|+|+||++.|+.
T Consensus 160 ~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~~-~~~~~~~l~~pNGia~spDg~~lYv 237 (355)
T 3sre_A 160 RHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-ND-VRVVAEGFDFANGINISPDGKYVYI 237 (355)
T ss_dssp CCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-TC-CEEEEEEESSEEEEEECTTSSEEEE
T ss_pred ccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-Ce-EEEeecCCcccCcceECCCCCEEEE
Confidence 332 245788999999988777541 1 2234444422 32 3333333446789999999998877
Q ss_pred Ee-CCCeEEEEEcCC-Cee-EeEeeccccCeEEEEEcC-CCCcEEEEEec
Q 013282 379 AE-PADFVHVYDVKS-GYE-KEQEIDFFGEISGISFSP-DTESLFIGVWD 424 (446)
Q Consensus 379 ~~-~dg~i~iwd~~~-~~~-~~~~~~~~~~v~~~~~sp-dg~~l~~~~~D 424 (446)
+. ..+.|+.|++.. +.. ........+..-++++.+ +|++.+++.++
T Consensus 238 adt~~~~I~~~~~~~~g~l~~~~~~~~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 238 AELLAHKIHVYEKHANWTLTPLRVLSFDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEGGGTEEEEEEECTTSCEEEEEEEECSSEEEEEEECTTTCCEEEEEESC
T ss_pred EeCCCCeEEEEEECCCCcEecCEEEeCCCCCceEEEeCCCCcEEEEecCC
Confidence 66 568899999863 322 111223456788999999 59877766554
No 304
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.63 E-value=0.0077 Score=58.55 Aligned_cols=151 Identities=13% Similarity=0.145 Sum_probs=95.6
Q ss_pred eeEEEEeCC-CCCeEEEEEeCCCcEEEEecCcceeeEeeeCC----CCeeEEEE-------CCCCCEEEEEecCC-----
Q 013282 236 NAVEIYGSP-SGAVHFTASNNDCGVRDFDMGKYQLSKHFRFP----WPVNHSSQ-------SPDGKLLIIVGDNP----- 298 (446)
Q Consensus 236 ~~i~~~~s~-~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~~----~~v~~~~~-------sp~~~~l~~~~~d~----- 298 (446)
..+.+ +| +...++++....+.|+++|+.++.+....... .....++| +++++.|+++...+
T Consensus 142 ~~la~--dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 142 GRLAF--DPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp EEEEE--ETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CEEEE--ccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 45555 77 34545555555577999999888877655422 24789999 99999777666543
Q ss_pred --cEEEEECCC-CceE-----EEecCCCCceeEEEECC-CCCEEEEEeCCCcEEEEEcc-------CCCcc---------
Q 013282 299 --DGLLVDSMT-GKTI-----ASLCGHLDFSFASAWHP-NGVTFATGNQDKTCRIWDLR-------NLSES--------- 353 (446)
Q Consensus 299 --~i~i~d~~~-~~~~-----~~~~~~~~~v~~~~~~p-~~~~l~sgs~d~~v~iwd~~-------~~~~~--------- 353 (446)
.|.+++... +... ..+... .....++++| ++.++++-..++.|..+|+. . +..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~t-g~~~tp~~~~~~ 297 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKN-GGSWDPIVKNNP 297 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHT-TCCCCCBGGGCT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccC-ceeecccccccc
Confidence 366776443 2221 222211 2345788999 55656666678889999986 2 221
Q ss_pred --eEE-Ee-cCCCceEEEEEccCCCEEEEEe-CCCeEEEEEc
Q 013282 354 --VAV-LK-GNLGAIRSIRYTSDGRYMATAE-PADFVHVYDV 390 (446)
Q Consensus 354 --~~~-~~-~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~ 390 (446)
... +. +.......|+|+|+|++|+.+. ..+.|+.++.
T Consensus 298 g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 298 NTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred cccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 112 21 2234567999999999655554 5678988654
No 305
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.62 E-value=0.04 Score=50.73 Aligned_cols=220 Identities=11% Similarity=0.084 Sum_probs=116.1
Q ss_pred eEEEEEe-C-CcEEEEeccCCcEEEEEcCCCCeeeEEEEee--cCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc
Q 013282 191 QVSTLAV-K-DKLLVAGGFQGELICKHLDRPGVSFCSRTTY--DDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~-~-~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~--~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
.+.++.+ + +..++ ++..|.| ++.. ..+......... .....+..+.+ .+ + ..+++ +..+.|.. ....
T Consensus 37 ~~~~v~~~~~~~~~~-~G~~g~i-~~s~-DgG~tW~~~~~~~~~~~~~~~~i~~--~~-~-~~~~~-g~~g~i~~-S~Dg 107 (327)
T 2xbg_A 37 TILDMSFIDRHHGWL-VGVNATL-METR-DGGQTWEPRTLVLDHSDYRFNSVSF--QG-N-EGWIV-GEPPIMLH-TTDG 107 (327)
T ss_dssp CEEEEEESSSSCEEE-EETTTEE-EEES-STTSSCEECCCCCSCCCCEEEEEEE--ET-T-EEEEE-EETTEEEE-ESST
T ss_pred cEEEEEECCCCcEEE-EcCCCeE-EEeC-CCCCCCeECCCCCCCCCccEEEEEe--cC-C-eEEEE-ECCCeEEE-ECCC
Confidence 5888888 3 44555 5556754 3333 333222111111 12335666665 55 3 34444 45665443 2222
Q ss_pred ce---eeEee-eCCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe-cCCCCceeEEEECCCCCEEEEEeCCCc
Q 013282 267 YQ---LSKHF-RFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-CGHLDFSFASAWHPNGVTFATGNQDKT 341 (446)
Q Consensus 267 ~~---~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~v~~~~~~p~~~~l~sgs~d~~ 341 (446)
++ .+... ..+..+..+.+.+++..++++ ..+.|+. ....|+.-..+ .+....+..+++.|++.+++.+...+.
T Consensus 108 G~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~ 185 (327)
T 2xbg_A 108 GQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSF 185 (327)
T ss_dssp TSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSE
T ss_pred CCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcE
Confidence 32 22211 123457777776666655544 4555432 22234333222 345567899999999988877755444
Q ss_pred EEEEEccCCCcceEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec----cccCeEEEEEcCCCC
Q 013282 342 CRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID----FFGEISGISFSPDTE 416 (446)
Q Consensus 342 v~iwd~~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~----~~~~v~~~~~spdg~ 416 (446)
.+-+|-. +..-..+ ......+..+.+.++++.++ ++.+|.+++.....+.....+.. ....+..+.+.|++.
T Consensus 186 ~~S~d~g--G~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~ 262 (327)
T 2xbg_A 186 YSTWEPG--QTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNE 262 (327)
T ss_dssp EEEECTT--CSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSC
T ss_pred EEEeCCC--CCceeECCCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCE
Confidence 4444431 2222222 23456788999999998665 45678887765333433322221 223588899998877
Q ss_pred cEEEEEecC
Q 013282 417 SLFIGVWDR 425 (446)
Q Consensus 417 ~l~~~~~D~ 425 (446)
.++++ .++
T Consensus 263 ~~~~g-~~g 270 (327)
T 2xbg_A 263 VWLAG-GAG 270 (327)
T ss_dssp EEEEE-STT
T ss_pred EEEEe-CCC
Confidence 65544 344
No 306
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.57 E-value=0.019 Score=52.00 Aligned_cols=188 Identities=13% Similarity=0.105 Sum_probs=99.9
Q ss_pred EEEeCCcEEEEeccC-----CcEEEEEcCCCC---eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-----CcEE
Q 013282 194 TLAVKDKLLVAGGFQ-----GELICKHLDRPG---VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVR 260 (446)
Q Consensus 194 ~l~~~~~~l~tg~~d-----g~i~vw~~~~~~---~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-----g~v~ 260 (446)
+...++.+++.||.+ ..+.+||+.+.. .... ..-........... .++ .+++.|+.+ ..+.
T Consensus 58 ~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~---~~~p~~r~~~~~~~--~~~-~lyv~GG~~~~~~~~~~~ 131 (301)
T 2vpj_A 58 SVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV---APMNVRRGLAGATT--LGD-MIYVSGGFDGSRRHTSME 131 (301)
T ss_dssp EEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE---CCCSSCCBSCEEEE--ETT-EEEEECCBCSSCBCCEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC---CCCCCCccceeEEE--ECC-EEEEEcccCCCcccceEE
Confidence 334588899999876 358888987765 3321 11111111111111 133 466666543 3588
Q ss_pred EEecCcceeeEeee--CCCCeeEEEECCCCCEEEEEecC-----CcEEEEECCCCceEEE--ecCCCCceeEEEECCCCC
Q 013282 261 DFDMGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNGV 331 (446)
Q Consensus 261 iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~ 331 (446)
+||+.+.+-...-. .+..-.+++. .++++++.|+.+ ..+.+||+.+.+-... +........++.+ +++
T Consensus 132 ~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~ 208 (301)
T 2vpj_A 132 RYDPNIDQWSMLGDMQTAREGAGLVV-ASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDH 208 (301)
T ss_dssp EEETTTTEEEEEEECSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE
T ss_pred EEcCCCCeEEECCCCCCCcccceEEE-ECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCE
Confidence 99988766444322 2111112222 266777777653 4688999887643222 2111111122222 677
Q ss_pred EEEEEeCC-----CcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCe
Q 013282 332 TFATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGY 394 (446)
Q Consensus 332 ~l~sgs~d-----~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~ 394 (446)
+++.|+.+ ..+.+||+.+ .+ ...+.. .......+. -++++++.|+.+ ..|.+||+.+.+
T Consensus 209 i~v~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 209 IYVVGGFDGTAHLSSVEAYNIRT-DS-WTTVTSMTTPRCYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp EEEECCBCSSSBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred EEEEeCCCCCcccceEEEEeCCC-Cc-EEECCCCCCcccceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 88888764 4689999854 22 222221 111122222 266777777655 358889988764
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.54 E-value=0.00024 Score=73.05 Aligned_cols=166 Identities=9% Similarity=-0.069 Sum_probs=103.5
Q ss_pred CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEE-ecCCcEEEEECCC----CceEEEecCCCCceeEEEECC-
Q 013282 255 NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIV-GDNPDGLLVDSMT----GKTIASLCGHLDFSFASAWHP- 328 (446)
Q Consensus 255 ~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~p- 328 (446)
....|+..++.+.+....+.....+..++|++.+..|+.+ ...+.|+.+++.. ......+.........+++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~ 463 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 463 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCS
T ss_pred CccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEee
Confidence 4467888898877666555544567789999877666555 4567899999875 222222222223346688886
Q ss_pred CCCEEEEEeCCCcEEEEEccCCCcceEEE-ecCCCceEEEEEccCCCEEEEEeC--CCeEEEEEcCCCeeEeEee-cccc
Q 013282 329 NGVTFATGNQDKTCRIWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAEP--ADFVHVYDVKSGYEKEQEI-DFFG 404 (446)
Q Consensus 329 ~~~~l~sgs~d~~v~iwd~~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~~--dg~i~iwd~~~~~~~~~~~-~~~~ 404 (446)
.++++++-...+.|.++++.. ..+..+ .........|+++|.+.+|+.+.. .+.|.++++.... ...+. ....
T Consensus 464 ~g~LY~tD~~~~~I~v~d~dg--~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~~~l~~~~l~ 540 (699)
T 1n7d_A 464 HSNIYWTDSVLGTVSVADTKG--VKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQ 540 (699)
T ss_dssp SSBCEECCTTTSCEEEEBSSS--CCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-CCEESCSSCS
T ss_pred CCcEEEEeccCCeEEEEecCC--CceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-eeEEEeCCCC
Confidence 445555555678899999843 333333 222345678999997666655543 2678888875432 22222 2234
Q ss_pred CeEEEEEcCCCCcEEEEEe
Q 013282 405 EISGISFSPDTESLFIGVW 423 (446)
Q Consensus 405 ~v~~~~~spdg~~l~~~~~ 423 (446)
..++|+|+|++..|+.+-.
T Consensus 541 ~PnGlavd~~~~~LY~aD~ 559 (699)
T 1n7d_A 541 WPNGITLDLLSGRLYWVDS 559 (699)
T ss_dssp SCCCEEECTTTCCEEEEET
T ss_pred CccEEEEeccCCEEEEEec
Confidence 5789999999888887643
No 308
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.52 E-value=0.0075 Score=54.74 Aligned_cols=215 Identities=10% Similarity=0.014 Sum_probs=107.3
Q ss_pred eCCcEEEEec-cC-----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-----CcEEEEecC
Q 013282 197 VKDKLLVAGG-FQ-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMG 265 (446)
Q Consensus 197 ~~~~~l~tg~-~d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-----g~v~iwd~~ 265 (446)
+++.+++.|| .+ ..+.+||+.+..... ...-.......... ..++ .+++.|+.+ ..+.+||+.
T Consensus 13 ~~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~--~~~~-~l~v~GG~~~~~~~~~~~~~d~~ 86 (301)
T 2vpj_A 13 ANEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF---LPSITRKRRYVASV--SLHD-RIYVIGGYDGRSRLSSVECLDYT 86 (301)
T ss_dssp CCEEEEEECCEETTTEECCCEEEEETTTTEEEE---CCCCSSCCBSCEEE--EETT-EEEEECCBCSSCBCCCEEEEETT
T ss_pred CCCEEEEEeCccCCCcceeEEEEEcCCCCeEEe---CCCCChhhccccEE--EECC-EEEEEcCCCCCccCceEEEEECC
Confidence 4667788888 43 367888887654221 11111111111111 1233 467777654 468899987
Q ss_pred cce---eeEeee--CCCCeeEEEECCCCCEEEEEecC-----CcEEEEECCCCceE--EEecCCCCceeEEEECCCCCEE
Q 013282 266 KYQ---LSKHFR--FPWPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGKTI--ASLCGHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 266 ~~~---~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~v~~~~~~p~~~~l 333 (446)
+.+ -...-. .+..-.+++. .++++++.|+.+ ..+.+||+.+.+-. ..+........++.+ +++++
T Consensus 87 ~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 163 (301)
T 2vpj_A 87 ADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIY 163 (301)
T ss_dssp CCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEE
T ss_pred CCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEE
Confidence 765 332222 2111112222 256677777643 36889998876532 222211111122222 67788
Q ss_pred EEEeCC-----CcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCeeEeEee
Q 013282 334 ATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGYEKEQEI 400 (446)
Q Consensus 334 ~sgs~d-----~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~~~~~~~ 400 (446)
+.|+.+ ..+.+||+.+ .. -..+.. .......+. -++++++.|+.+ ..|.+||+.+.+-...-.
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 239 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHT-GH-WTNVTPMATKRSGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTS 239 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred EECCCCCCcccceEEEEeCCC-Cc-EEeCCCCCcccccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCC
Confidence 888764 3588999854 22 222221 111122222 256777777654 469999998875332211
Q ss_pred ccc--cCeEEEEEcCCCCcEEEEEecCC
Q 013282 401 DFF--GEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 401 ~~~--~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
... .....+. -+++.++.|+.++.
T Consensus 240 ~p~~r~~~~~~~--~~~~i~v~GG~~~~ 265 (301)
T 2vpj_A 240 MTTPRCYVGATV--LRGRLYAIAGYDGN 265 (301)
T ss_dssp CSSCCBSCEEEE--ETTEEEEECCBCSS
T ss_pred CCCcccceeEEE--ECCEEEEEcCcCCC
Confidence 111 1122222 25666677766543
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.47 E-value=0.047 Score=49.48 Aligned_cols=188 Identities=10% Similarity=0.057 Sum_probs=100.0
Q ss_pred EEEeCCcEEEEeccC----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC------CcEEEEe
Q 013282 194 TLAVKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND------CGVRDFD 263 (446)
Q Consensus 194 ~l~~~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d------g~v~iwd 263 (446)
+...++.+++.||.+ ..+.+||+.+........ . ........... -++ .+++.|+.+ ..+.+||
T Consensus 51 ~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~-~--p~~r~~~~~~~--~~~-~iyv~GG~~~~~~~~~~~~~~d 124 (306)
T 3ii7_A 51 CVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG-P--PTPRDSLAACA--AEG-KIYTSGGSEVGNSALYLFECYD 124 (306)
T ss_dssp EEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC-C--SSCCBSCEEEE--ETT-EEEEECCBBTTBSCCCCEEEEE
T ss_pred EEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC-C--CccccceeEEE--ECC-EEEEECCCCCCCcEeeeEEEEe
Confidence 334588899999866 567888887764332111 1 11111111111 133 366777654 4588999
Q ss_pred cCcceeeEeee--CCCCeeEEEECCCCCEEEEEec---------CCcEEEEECCCCceEEE--ecCCCCceeEEEECCCC
Q 013282 264 MGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGD---------NPDGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNG 330 (446)
Q Consensus 264 ~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~---------d~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~ 330 (446)
+.+.+-...-. .+..-.+++. -++++++.|+. ...+.+||+.+.+-... +.........+.+ ++
T Consensus 125 ~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~ 201 (306)
T 3ii7_A 125 TRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KD 201 (306)
T ss_dssp TTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT
T ss_pred CCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CC
Confidence 98766443322 1111112222 25666677653 34588999987743221 2111111122222 67
Q ss_pred CEEEEEeCC-----CcEEEEEccCCCcceEEEe---cCCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCe
Q 013282 331 VTFATGNQD-----KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGY 394 (446)
Q Consensus 331 ~~l~sgs~d-----~~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~ 394 (446)
++++.|+.+ ..+.+||+.+ .+ -..+. .......++.+ ++++++.|+.+ ..+.+||+.+.+
T Consensus 202 ~i~v~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 202 KIFAVGGQNGLGGLDNVEYYDIKL-NE-WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEEEECCEETTEEBCCEEEEETTT-TE-EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEEEEeCCCCCCCCceEEEeeCCC-Cc-EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 788887754 3588999854 22 22221 11112223333 66777777744 468999998764
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.45 E-value=0.051 Score=49.13 Aligned_cols=187 Identities=11% Similarity=0.112 Sum_probs=97.6
Q ss_pred EEeCCcEEEEeccCC-----cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC-----cEEEEec
Q 013282 195 LAVKDKLLVAGGFQG-----ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC-----GVRDFDM 264 (446)
Q Consensus 195 l~~~~~~l~tg~~dg-----~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg-----~v~iwd~ 264 (446)
...++.+++.||.++ .+.+||..+....... ......... ++.. -++ .+++.|+.++ .+.+||+
T Consensus 58 ~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~-~~~~---~~~-~iyv~GG~~~~~~~~~~~~~d~ 131 (302)
T 2xn4_A 58 VYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA-NMRDRRSTL-GAAV---LNG-LLYAVGGFDGSTGLSSVEAYNI 131 (302)
T ss_dssp EEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEEC-CCSSCCBSC-EEEE---ETT-EEEEEEEECSSCEEEEEEEEET
T ss_pred EEECCEEEEEeCcCCCccccceEEECCCCCceeeCC-CCCccccce-EEEE---ECC-EEEEEcCCCCCccCceEEEEeC
Confidence 344888999998764 4778887765432211 111111111 1111 133 3666666543 5778898
Q ss_pred CcceeeEeee--CCCCeeEEEECCCCCEEEEEec-------CCcEEEEECCCCceEE--EecCCCCceeEEEECCCCCEE
Q 013282 265 GKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGD-------NPDGLLVDSMTGKTIA--SLCGHLDFSFASAWHPNGVTF 333 (446)
Q Consensus 265 ~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~-------d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l 333 (446)
.+.+-...-. .+..-.+++. -++++++.|+. ...+.+||+.+.+-.. .+........++.+ +++++
T Consensus 132 ~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 208 (302)
T 2xn4_A 132 KSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLY 208 (302)
T ss_dssp TTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred CCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEE
Confidence 7766443322 1111122222 25666677654 2458899998764322 22211111122222 67788
Q ss_pred EEEeCC-----CcEEEEEccCCCcceEEEecC---CCceEEEEEccCCCEEEEEeCCC-----eEEEEEcCCCe
Q 013282 334 ATGNQD-----KTCRIWDLRNLSESVAVLKGN---LGAIRSIRYTSDGRYMATAEPAD-----FVHVYDVKSGY 394 (446)
Q Consensus 334 ~sgs~d-----~~v~iwd~~~~~~~~~~~~~~---~~~v~~l~~s~dg~~l~~~~~dg-----~i~iwd~~~~~ 394 (446)
+.|+.+ ..+.+||+.+ . .-..+... ......+. -++++++.|+.++ .|.+||+.+.+
T Consensus 209 v~GG~~~~~~~~~~~~yd~~~-~-~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 209 AVGGHDGPLVRKSVEVYDPTT-N-AWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EECCBSSSSBCCCEEEEETTT-T-EEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EECCCCCCcccceEEEEeCCC-C-CEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 888764 3688999854 2 22222211 11111222 3667777777553 48999988764
No 311
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.44 E-value=0.04 Score=50.27 Aligned_cols=186 Identities=9% Similarity=0.029 Sum_probs=94.1
Q ss_pred EEeCCcEEEEeccC-----------CcEEEEEcCCCCeeeEEEEeecCCCcee-eEEEEeCCCCCeEEEEEeCC------
Q 013282 195 LAVKDKLLVAGGFQ-----------GELICKHLDRPGVSFCSRTTYDDNAITN-AVEIYGSPSGAVHFTASNND------ 256 (446)
Q Consensus 195 l~~~~~~l~tg~~d-----------g~i~vw~~~~~~~~~~~~~~~~~~~~v~-~i~~~~s~~~~~~l~s~s~d------ 256 (446)
...++.+++.||.. ..+.+||..+..... ...-...... ++.. -++ .+++.|+.+
T Consensus 42 ~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~~---~~~-~lyv~GG~~~~~~~~ 114 (315)
T 4asc_A 42 VTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG---MPPLPSPRCLFGLGE---ALN-SIYVVGGREIKDGER 114 (315)
T ss_dssp ECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE---CCCBSSCEESCEEEE---ETT-EEEEECCEESSTTCC
T ss_pred EEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE---CCCCCcchhceeEEE---ECC-EEEEEeCCcCCCCCc
Confidence 33488888999841 126677776654221 1111111111 1111 133 466666632
Q ss_pred --CcEEEEecCcceeeEeee--CCCCeeEEEECCCCCEEEEEec------CCcEEEEECCCCceEE--EecCCCCceeEE
Q 013282 257 --CGVRDFDMGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGD------NPDGLLVDSMTGKTIA--SLCGHLDFSFAS 324 (446)
Q Consensus 257 --g~v~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~------d~~i~i~d~~~~~~~~--~~~~~~~~v~~~ 324 (446)
..+.+||+.+.+-...-. .+..-.+++. .++++++.|+. -..+.+||+.+.+-.. .+........++
T Consensus 115 ~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~ 193 (315)
T 4asc_A 115 CLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGAT 193 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEE
T ss_pred ccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEE
Confidence 458899998765433222 1111122222 35667777775 2468999988764222 121111111222
Q ss_pred EECCCCCEEEEEeCCC-----cEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC--------------
Q 013282 325 AWHPNGVTFATGNQDK-----TCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-------------- 382 (446)
Q Consensus 325 ~~~p~~~~l~sgs~d~-----~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d-------------- 382 (446)
.+ ++++++.|+.++ .+.+||+.+ . .-..+.. .......+. -++++++.|+.+
T Consensus 194 ~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~ 267 (315)
T 4asc_A 194 VH--DGRIIVAAGVTDTGLTSSAEVYSITD-N-KWAPFEAFPQERSSLSLVS--LVGTLYAIGGFATLETESGELVPTEL 267 (315)
T ss_dssp EE--TTEEEEEEEECSSSEEEEEEEEETTT-T-EEEEECCCSSCCBSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EE--CCEEEEEeccCCCCccceEEEEECCC-C-eEEECCCCCCcccceeEEE--ECCEEEEECCccccCcCCcccccccc
Confidence 22 677888887654 488888854 2 2222221 111122222 256777777653
Q ss_pred CeEEEEEcCCCe
Q 013282 383 DFVHVYDVKSGY 394 (446)
Q Consensus 383 g~i~iwd~~~~~ 394 (446)
..|.+||+.+.+
T Consensus 268 ~~v~~yd~~~~~ 279 (315)
T 4asc_A 268 NDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEETTTTE
T ss_pred CcEEEecCCCCh
Confidence 237788888764
No 312
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.43 E-value=0.014 Score=52.93 Aligned_cols=216 Identities=13% Similarity=0.056 Sum_probs=106.1
Q ss_pred eCCcEEEEeccC----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-----CcEEEEecCcc
Q 013282 197 VKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRDFDMGKY 267 (446)
Q Consensus 197 ~~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-----g~v~iwd~~~~ 267 (446)
+++.+++.||.+ ..+.+||+.+..... ...-.......... .-+ ..+++.|+.+ ..+.+||+.+.
T Consensus 14 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~--~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~ 87 (302)
T 2xn4_A 14 LPKLMVVVGGQAPKAIRSVECYDFKEERWHQ---VAELPSRRCRAGMV--YMA-GLVFAVGGFNGSLRVRTVDSYDPVKD 87 (302)
T ss_dssp -CEEEEEECCBSSSBCCCEEEEETTTTEEEE---ECCCSSCCBSCEEE--EET-TEEEEESCBCSSSBCCCEEEEETTTT
T ss_pred CCCEEEEECCCCCCCCCcEEEEcCcCCcEeE---cccCCcccccceEE--EEC-CEEEEEeCcCCCccccceEEECCCCC
Confidence 356777888764 357788887664221 11111111111111 113 3467777644 35888998876
Q ss_pred eeeEeee--CCCCeeEEEECCCCCEEEEEecCC-----cEEEEECCCCceEEE--ecCCCCceeEEEECCCCCEEEEEeC
Q 013282 268 QLSKHFR--FPWPVNHSSQSPDGKLLIIVGDNP-----DGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNGVTFATGNQ 338 (446)
Q Consensus 268 ~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~-----~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~sgs~ 338 (446)
+-...-. .+..-.+++. .++++++.|+.++ .+.+||+.+.+-... +........++.+ ++++++.|+.
T Consensus 88 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 164 (302)
T 2xn4_A 88 QWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGY 164 (302)
T ss_dssp EEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCE
T ss_pred ceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCC
Confidence 6443322 1111122222 2567777777553 578889887653221 2111111122222 6677777765
Q ss_pred C-------CcEEEEEccCCCcceEEEe---cCCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCeeEeEeeccc
Q 013282 339 D-------KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGYEKEQEIDFF 403 (446)
Q Consensus 339 d-------~~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~~~~~~~~~~ 403 (446)
+ ..+.+||+.. .. -..+. ........+.+ ++++++.|+.+ ..+.+||+.+.+-.. +....
T Consensus 165 ~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~-~~~~~ 239 (302)
T 2xn4_A 165 DVASRQCLSTVECYNATT-NE-WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQ-VADMN 239 (302)
T ss_dssp ETTTTEECCCEEEEETTT-TE-EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEE-ECCCS
T ss_pred CCCCCccccEEEEEeCCC-Cc-EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEee-CCCCC
Confidence 3 3588899854 22 22221 11111222222 56777777654 369999998864322 21111
Q ss_pred -cCeEEEEEcCCCCcEEEEEecCC
Q 013282 404 -GEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 404 -~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
......+...+++.++.|+.++.
T Consensus 240 ~~r~~~~~~~~~~~i~v~GG~~~~ 263 (302)
T 2xn4_A 240 MCRRNAGVCAVNGLLYVVGGDDGS 263 (302)
T ss_dssp SCCBSCEEEEETTEEEEECCBCSS
T ss_pred CccccCeEEEECCEEEEECCcCCC
Confidence 11111112225667777766543
No 313
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=97.32 E-value=0.0047 Score=52.67 Aligned_cols=165 Identities=11% Similarity=0.014 Sum_probs=94.1
Q ss_pred EEEEEeCCCcEEEEecCcce------eeEeeeC--CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCce------EEEe
Q 013282 249 HFTASNNDCGVRDFDMGKYQ------LSKHFRF--PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKT------IASL 314 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~------~~~~~~~--~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~------~~~~ 314 (446)
+|++..+| +|++=-+.+.. ....+.. =..+..++|+|+|.+.++ .+|.++-.+..+.+. -..+
T Consensus 6 ~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~I 82 (236)
T 1tl2_A 6 MLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKI 82 (236)
T ss_dssp CEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEE
T ss_pred EEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEe
Confidence 45666666 66655554433 1122222 136789999999996666 677887777655221 1112
Q ss_pred c--CCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcc-----eEEE-ecCCCceEEEEEccCCCEEEEEeCCCeEE
Q 013282 315 C--GHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSES-----VAVL-KGNLGAIRSIRYTSDGRYMATAEPADFVH 386 (446)
Q Consensus 315 ~--~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~-----~~~~-~~~~~~v~~l~~s~dg~~l~~~~~dg~i~ 386 (446)
- +... -.++.|.|+|.+.++ .||.|.-++..+.... -..+ ..-=..+..|.|.|+|.+.+.. ++.++
T Consensus 83 G~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 83 GNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp ECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred ccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 1 1111 478899999988877 5698887775332211 0111 1112468999999999876665 77754
Q ss_pred EEEcCCCee-----EeEeec--cccCeEEEEEcCCCCcEEEE
Q 013282 387 VYDVKSGYE-----KEQEID--FFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 387 iwd~~~~~~-----~~~~~~--~~~~v~~~~~spdg~~l~~~ 421 (446)
-.-..++.. .....+ ....-.-+.|.|+|...++.
T Consensus 158 r~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~ 199 (236)
T 1tl2_A 158 KALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ 199 (236)
T ss_dssp EECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE
T ss_pred ecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe
Confidence 433222110 111111 22234457799998877665
No 314
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.27 E-value=0.025 Score=51.34 Aligned_cols=212 Identities=12% Similarity=-0.004 Sum_probs=105.2
Q ss_pred CcEEEEeccC--CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC----CcEEEEecCcceeeEe
Q 013282 199 DKLLVAGGFQ--GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND----CGVRDFDMGKYQLSKH 272 (446)
Q Consensus 199 ~~~l~tg~~d--g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d----g~v~iwd~~~~~~~~~ 272 (446)
+.+++.||.+ ..+.+||..+..... ...-.......... ..++ .+++.|+.+ ..+.+||+.+.+-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~--~~~~-~lyv~GG~~~~~~~~~~~~d~~~~~W~~~ 85 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTD---IRCPFEKRRDAACV--FWDN-VVYILGGSQLFPIKRMDCYNVVKDSWYSK 85 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEE---CCCCSCCCBSCEEE--EETT-EEEEECCBSSSBCCEEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEec---CCCCCcccceeEEE--EECC-EEEEEeCCCCCCcceEEEEeCCCCeEEEC
Confidence 4456677653 567888887664321 11111111111111 1233 367777654 5688899987765433
Q ss_pred eeCCCC--eeEEEECCCCCEEEEEecC------CcEEEEECCCCceEEE--ecCCCCceeEEEECCCCCEEEEEeC----
Q 013282 273 FRFPWP--VNHSSQSPDGKLLIIVGDN------PDGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNGVTFATGNQ---- 338 (446)
Q Consensus 273 ~~~~~~--v~~~~~sp~~~~l~~~~~d------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~sgs~---- 338 (446)
-..+.+ -.+++ .-++++++.|+.+ ..+.+||+.+.+-... +........++.+ ++++++.|+.
T Consensus 86 ~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 162 (306)
T 3ii7_A 86 LGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNN 162 (306)
T ss_dssp ECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCT
T ss_pred CCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCC
Confidence 321111 11222 2256777777754 4688999987653221 2111111122222 6677777764
Q ss_pred -----CCcEEEEEccCCCcceEEEecC---CCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCeeEeE--eeccc
Q 013282 339 -----DKTCRIWDLRNLSESVAVLKGN---LGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGYEKEQ--EIDFF 403 (446)
Q Consensus 339 -----d~~v~iwd~~~~~~~~~~~~~~---~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~~~~~--~~~~~ 403 (446)
-..+.+||+.+ . .-..+... ......+.+ ++++++.|+.+ ..+.+||+.+.+-... +....
T Consensus 163 ~~~~~~~~~~~yd~~~-~-~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 163 VSGRVLNSCEVYDPAT-E-TWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp TTCEECCCEEEEETTT-T-EEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CcccccceEEEeCCCC-C-eEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 34588999854 2 22222211 111222222 56667766643 3589999988642221 11111
Q ss_pred cCeEEEEEcCCCCcEEEEEecC
Q 013282 404 GEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 404 ~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.....+.+ +++.++.|+.++
T Consensus 239 ~~~~~~~~--~~~i~v~GG~~~ 258 (306)
T 3ii7_A 239 VTVKCAAV--GSIVYVLAGFQG 258 (306)
T ss_dssp SCCEEEEE--TTEEEEEECBCS
T ss_pred cceeEEEE--CCEEEEEeCcCC
Confidence 12222333 566777776554
No 315
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.26 E-value=0.14 Score=48.44 Aligned_cols=192 Identities=12% Similarity=0.043 Sum_probs=118.3
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ceeeEeee--
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFR-- 274 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~-- 274 (446)
..+.||.-. ..++.||++++......... . ..| +-|.|-.... |+-. .+..|+-|++.. ..+++.|.
T Consensus 76 ~~~iiALra-g~~lQiFnle~K~klks~~~---~-e~V--vfWkWis~~~--l~lV-T~taVyHWsi~~~s~P~kvFdR~ 145 (494)
T 1bpo_A 76 ASKVIALKA-GKTLQIFNIEMKSKMKAHTM---T-DDV--TFWKWISLNT--VALV-TDNAVYHWSMEGESQPVKMFDRH 145 (494)
T ss_dssp SSSCEEEEE-TTEEEEEETTTTEEEEEEEC---S-SCC--CEEEEEETTE--EEEE-CSSEEEEEESSSSCCCEEEEECC
T ss_pred CCcEEEEec-CCeEEEEchHHhhhhcceec---C-CCc--eEEEecCCCe--EEEE-cCCeeEEecccCCCCchhheecc
Confidence 444444443 67899999988754432221 1 122 3333333332 3333 457899999964 45666665
Q ss_pred ---CCCCeeEEEECCCCCEEEEEec-------CCcEEEEECCCCceEEEecCCCCceeEEEECCC---CCEEEEEeCC--
Q 013282 275 ---FPWPVNHSSQSPDGKLLIIVGD-------NPDGLLVDSMTGKTIASLCGHLDFSFASAWHPN---GVTFATGNQD-- 339 (446)
Q Consensus 275 ---~~~~v~~~~~sp~~~~l~~~~~-------d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~---~~~l~sgs~d-- 339 (446)
....|..-..+++.++++..|- .|.+.+|..+.+ .-+.+.||.+.-..+....+ ..+++.+...
T Consensus 146 ~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~ 224 (494)
T 1bpo_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQA 224 (494)
T ss_dssp GGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTT
T ss_pred hhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecCCCCCCceEEEEEEecCC
Confidence 2456777788999998876542 467889987644 45667788665444433221 1345555543
Q ss_pred -CcEEEEEccCC--Cc------ceEEEecC---CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEee
Q 013282 340 -KTCRIWDLRNL--SE------SVAVLKGN---LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 400 (446)
Q Consensus 340 -~~v~iwd~~~~--~~------~~~~~~~~---~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~ 400 (446)
+.++|-++... +. .+..+... ..-..++..++....++.-+.-|.|++||+.++.++..-.
T Consensus 225 g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 225 GGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp CCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred CcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeec
Confidence 78999998543 11 11111111 2224478888888889999999999999999998877654
No 316
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=97.25 E-value=0.033 Score=50.87 Aligned_cols=209 Identities=12% Similarity=0.060 Sum_probs=103.0
Q ss_pred EEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC-----C------CcEEEEecCccee
Q 013282 201 LLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN-----D------CGVRDFDMGKYQL 269 (446)
Q Consensus 201 ~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~-----d------g~v~iwd~~~~~~ 269 (446)
+++.|+ ..+.+||..+..... ............... ..++. +++.|+. . ..+.+||+.+.+-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~--~~~~~p~~r~~~~~~--~~~~~-iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W 79 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYC--ASLSSQVPKNHVSLV--TKENQ-VFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW 79 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEE--EECCCCSCSSEEEEE--CTTCC-EEEEEEEEECSSCSSSCEEEEEEEEETTTTEE
T ss_pred EEEEcC--CceEEECCCCCeEec--CCCCCCCCccceEEE--EECCE-EEEEcCcccCCCCCccccccceEEecCCCCeE
Confidence 456666 568899987765331 111111112222222 34555 5666663 1 1277889887664
Q ss_pred eEeeeCCCCe--eEEEECCCCCEEEEEecC--------CcEEEEECCCCceEE--EecCCCCceeEEEECCCCCEEEEEe
Q 013282 270 SKHFRFPWPV--NHSSQSPDGKLLIIVGDN--------PDGLLVDSMTGKTIA--SLCGHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 270 ~~~~~~~~~v--~~~~~sp~~~~l~~~~~d--------~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~p~~~~l~sgs 337 (446)
...-..+.+- .+++. -++++++.|+.+ ..+.+||+.+.+-.. .+...... .+++. -++++++.|+
T Consensus 80 ~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~GG 156 (315)
T 4asc_A 80 LGMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYG-HTVLS-HMDLVYVIGG 156 (315)
T ss_dssp EECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBS-CEEEE-ETTEEEEECC
T ss_pred EECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccc-eeEEE-ECCEEEEEeC
Confidence 3322222111 12222 256666777632 458899998764221 12111111 12222 3667888887
Q ss_pred C-C-----CcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCCC-----eEEEEEcCCCeeEeEee--c
Q 013282 338 Q-D-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPAD-----FVHVYDVKSGYEKEQEI--D 401 (446)
Q Consensus 338 ~-d-----~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~dg-----~i~iwd~~~~~~~~~~~--~ 401 (446)
. + ..+.+||+.+ .+ -..+.. ......++. -++++++.|+.++ .+.+||+.+.+-...-. .
T Consensus 157 ~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~ 232 (315)
T 4asc_A 157 KGSDRKCLNKMCVYDPKK-FE-WKELAPMQTARSLFGATV--HDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQ 232 (315)
T ss_dssp BCTTSCBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEE--ETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSS
T ss_pred CCCCCcccceEEEEeCCC-Ce-EEECCCCCCchhceEEEE--ECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCC
Confidence 6 2 3688999854 21 222221 111122222 2667777777554 58899998874322211 1
Q ss_pred cccCeEEEEEcCCCCcEEEEEecC
Q 013282 402 FFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 402 ~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.......+. -+++.++.|+.++
T Consensus 233 ~r~~~~~~~--~~~~l~v~GG~~~ 254 (315)
T 4asc_A 233 ERSSLSLVS--LVGTLYAIGGFAT 254 (315)
T ss_dssp CCBSCEEEE--ETTEEEEEEEEEE
T ss_pred cccceeEEE--ECCEEEEECCccc
Confidence 111122222 2567777777643
No 317
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.21 E-value=0.013 Score=53.49 Aligned_cols=217 Identities=12% Similarity=0.033 Sum_probs=107.7
Q ss_pred EEEEEeCCcEEEEeccC----CcEEEEEcCCCCeeeEEEEeecCCCcee-eEEEEeCCCCCeEEEEEeC----C-----C
Q 013282 192 VSTLAVKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTYDDNAITN-AVEIYGSPSGAVHFTASNN----D-----C 257 (446)
Q Consensus 192 v~~l~~~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~~~~~~v~-~i~~~~s~~~~~~l~s~s~----d-----g 257 (446)
-.++..++.+++.||.+ ..+.+||..+..... ...-...... ++.. .++ .+++.|+. + .
T Consensus 18 ~~~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~---~~~~p~~r~~~~~~~---~~~-~lyv~GG~~~~~~~~~~~~ 90 (308)
T 1zgk_A 18 SHAPKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLR---LADLQVPRSGLAGCV---VGG-LLYAVGGRNNSPDGNTDSS 90 (308)
T ss_dssp ---CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEE---CCCCSSCCBSCEEEE---ETT-EEEEECCEEEETTEEEECC
T ss_pred ccccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeE---CCCCCcccccceEEE---ECC-EEEEECCCcCCCCCCeecc
Confidence 33444578888888853 357888887654321 1111111111 1211 233 36666654 2 4
Q ss_pred cEEEEecCcceeeEeee--CCCCeeEEEECCCCCEEEEEecC-----CcEEEEECCCCceEEE--ecCCCCceeEEEECC
Q 013282 258 GVRDFDMGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGKTIAS--LCGHLDFSFASAWHP 328 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p 328 (446)
.+.+||+.+.+....-. .+..-.+++. -++++++.|+.+ ..+.+||+.+.+-... +........++.+
T Consensus 91 ~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~-- 167 (308)
T 1zgk_A 91 ALDCYNPMTNQWSPCAPMSVPRNRIGVGV-IDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL-- 167 (308)
T ss_dssp CEEEEETTTTEEEECCCCSSCCBTCEEEE-ETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--
T ss_pred eEEEECCCCCeEeECCCCCcCccccEEEE-ECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--
Confidence 58889988766433322 1111112222 256777777643 4688999887643221 2111111122233
Q ss_pred CCCEEEEEeCC-----CcEEEEEccCCCcceEEEe---cCCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCee
Q 013282 329 NGVTFATGNQD-----KTCRIWDLRNLSESVAVLK---GNLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGYE 395 (446)
Q Consensus 329 ~~~~l~sgs~d-----~~v~iwd~~~~~~~~~~~~---~~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~~ 395 (446)
++++++.|+.+ ..+.+||+.. .+ -..+. ........+.+ ++++++.|+.+ ..+.+||+.+.+-
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W 243 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPER-NE-WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETW 243 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCC-Ce-EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcE
Confidence 67788888764 4588899854 22 22221 11112222333 56777777654 4599999988643
Q ss_pred EeEeeccc---cCeEEEEEcCCCCcEEEEEecC
Q 013282 396 KEQEIDFF---GEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 396 ~~~~~~~~---~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.. +.... .....+. -+++.++.|+.++
T Consensus 244 ~~-~~~~p~~r~~~~~~~--~~~~i~v~GG~~~ 273 (308)
T 1zgk_A 244 TF-VAPMKHRRSALGITV--HQGRIYVLGGYDG 273 (308)
T ss_dssp EE-CCCCSSCCBSCEEEE--ETTEEEEECCBCS
T ss_pred EE-CCCCCCCccceEEEE--ECCEEEEEcCcCC
Confidence 22 11111 1112222 2566777776654
No 318
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=97.16 E-value=0.06 Score=49.12 Aligned_cols=187 Identities=12% Similarity=0.111 Sum_probs=92.1
Q ss_pred EeCCcEEEEecc----CC-------cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-------C
Q 013282 196 AVKDKLLVAGGF----QG-------ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-------C 257 (446)
Q Consensus 196 ~~~~~~l~tg~~----dg-------~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-------g 257 (446)
..++.+++.||. ++ .+.+||..+...... ......... .++.. -++ .+++.|+.+ .
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~-~~~~~---~~~-~iyv~GG~~~~~~~~~~ 127 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL-PPLPSARCL-FGLGE---VDD-KIYVVAGKDLQTEASLD 127 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-SCBSSCBCS-CEEEE---ETT-EEEEEEEEBTTTCCEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-CCCCccccc-cceEE---ECC-EEEEEcCccCCCCcccc
Confidence 348888999984 12 166677765532211 011111111 11221 133 366666643 3
Q ss_pred cEEEEecCcceeeEeeeCCCCe--eEEEECCCCCEEEEEec------CCcEEEEECCCCceEE--EecCCCCceeEEEEC
Q 013282 258 GVRDFDMGKYQLSKHFRFPWPV--NHSSQSPDGKLLIIVGD------NPDGLLVDSMTGKTIA--SLCGHLDFSFASAWH 327 (446)
Q Consensus 258 ~v~iwd~~~~~~~~~~~~~~~v--~~~~~sp~~~~l~~~~~------d~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~ 327 (446)
.+.+||+.+.+-...-..+.+. .+++. .++++++.|+. ...+.+||+.+.+-.. .+........++.+
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~- 205 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH- 205 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-
T ss_pred eEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE-
Confidence 4788898876644332222211 12222 46677777764 2458999998764222 12111111122222
Q ss_pred CCCCEEEEEeCCC-----cEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC--------------CeE
Q 013282 328 PNGVTFATGNQDK-----TCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA--------------DFV 385 (446)
Q Consensus 328 p~~~~l~sgs~d~-----~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d--------------g~i 385 (446)
++++++.|+.++ .+.+||+.+ .+ -..+.. .......+. -++++++.|+.+ ..|
T Consensus 206 -~~~iyv~GG~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v 280 (318)
T 2woz_A 206 -KGKIVIAGGVTEDGLSASVEAFDLKT-NK-WEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDI 280 (318)
T ss_dssp -TTEEEEEEEEETTEEEEEEEEEETTT-CC-EEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCE
T ss_pred -CCEEEEEcCcCCCCccceEEEEECCC-Ce-EEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeE
Confidence 677888887543 477888854 22 222221 111112222 356666766643 357
Q ss_pred EEEEcCCCee
Q 013282 386 HVYDVKSGYE 395 (446)
Q Consensus 386 ~iwd~~~~~~ 395 (446)
.+||+.+.+-
T Consensus 281 ~~yd~~~~~W 290 (318)
T 2woz_A 281 WKYEDDKKEW 290 (318)
T ss_dssp EEEETTTTEE
T ss_pred EEEeCCCCEe
Confidence 8888887643
No 319
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=97.16 E-value=0.0017 Score=59.87 Aligned_cols=193 Identities=9% Similarity=0.032 Sum_probs=104.7
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEE-eCCCcEEEEecCcceeeEeeeC--
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTAS-NNDCGVRDFDMGKYQLSKHFRF-- 275 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~-s~dg~v~iwd~~~~~~~~~~~~-- 275 (446)
+.+++.++.||.|...|..+++........ .....+..-.- -.+.+...++.. +.||.|..++..+|.....+..
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~W~~~~~-~~~p~~~~~~~-~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~ 87 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHIIWSIEPE-NFQPLIEIQEP-SRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQ 87 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEEEEECGG-GSCCSEECCCS-CTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHH
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCC-ccCCcEEecCC-ccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccc
Confidence 457888899999999888777655433221 00111110000 011122334443 6899999999988876655542
Q ss_pred ---CCCeeE---EEE-C----CCCCEEEEEecCCcEEEEECCCCceEEEecCCC--Cc-----eeEEEEC-----CCCCE
Q 013282 276 ---PWPVNH---SSQ-S----PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHL--DF-----SFASAWH-----PNGVT 332 (446)
Q Consensus 276 ---~~~v~~---~~~-s----p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--~~-----v~~~~~~-----p~~~~ 332 (446)
..++.. ..+ . ..+..+++|+.++.+...|+++|+.+..+.... +. ..|.... -.+..
T Consensus 88 lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~ 167 (339)
T 2be1_A 88 LVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENM 167 (339)
T ss_dssp HHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCE
T ss_pred ceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCe
Confidence 222221 000 0 145678899999999999999999999886321 11 0111111 12356
Q ss_pred EEEEeCCCcEEEEEccCCCcceEEE-----ecCCCc--e-EEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEe
Q 013282 333 FATGNQDKTCRIWDLRNLSESVAVL-----KGNLGA--I-RSIRYTSDGRYMATAEPADFVHVYDVKSGYEKE 397 (446)
Q Consensus 333 l~sgs~d~~v~iwd~~~~~~~~~~~-----~~~~~~--v-~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~ 397 (446)
++.|..+..+.+.+ ++ ++ +..+ ...... + .+-..+.|+++ +.++.||.|..+|..+|..+-
T Consensus 168 v~ig~~~y~v~~~~-~s-G~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 168 IVIGKTIFELGIHS-YD-GA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEECEECC-TT-SC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTTCCEEE
T ss_pred EEEecceEEEEEEC-CC-CC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCCCcEEE
Confidence 77777776666666 23 22 2111 111000 0 00011235666 447889999999988887654
No 320
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.14 E-value=0.045 Score=51.53 Aligned_cols=140 Identities=14% Similarity=0.119 Sum_probs=92.2
Q ss_pred CCCCEEEEEecCCcEEEEECCCCceEEEecCC----CCceeEEEECCCCCEEEEEeCCCcEEEEEccCCC---------c
Q 013282 286 PDGKLLIIVGDNPDGLLVDSMTGKTIASLCGH----LDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLS---------E 352 (446)
Q Consensus 286 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~----~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~---------~ 352 (446)
.+|..++++-. +.||.-++..+...+.++.. -..+..+..+|+|.+||..+. .+|.|-.+.... .
T Consensus 30 ~n~t~i~~a~~-n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 30 QNGTRIVFIQD-NIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTTEEEEEET-TEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHH
T ss_pred cCCCEEEEEEC-CEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecC-CeEEEEEecCccccCccccccc
Confidence 45555555543 57777777644445555432 225788999999999998864 479998885211 0
Q ss_pred --ceEEEec------CCCceEEEEEccCC---CEEEEEeCCCeEEEEEcCCCee-EeEee------c---cccCeEEEEE
Q 013282 353 --SVAVLKG------NLGAIRSIRYTSDG---RYMATAEPADFVHVYDVKSGYE-KEQEI------D---FFGEISGISF 411 (446)
Q Consensus 353 --~~~~~~~------~~~~v~~l~~s~dg---~~l~~~~~dg~i~iwd~~~~~~-~~~~~------~---~~~~v~~~~~ 411 (446)
....+.- ...+|..+.|+|-| ..|++-..|+.|++||+..... ...+. + ....|.+++|
T Consensus 108 ~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 108 AFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEE
T ss_pred ccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEE
Confidence 1122321 24679999999955 5899999999999999986321 11111 1 1146889999
Q ss_pred cCCCCcEEEEE--ecCCc
Q 013282 412 SPDTESLFIGV--WDRTY 427 (446)
Q Consensus 412 spdg~~l~~~~--~D~~~ 427 (446)
.++|-.|++.+ ..|.+
T Consensus 188 g~~~lTLYvl~~t~~GDI 205 (452)
T 3pbp_A 188 SKDGLTLYCLNTTEGGDI 205 (452)
T ss_dssp CTTSSCEEEEECTTSCEE
T ss_pred cCCCcEEEEEecCCCCCE
Confidence 99988888876 44544
No 321
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.10 E-value=0.16 Score=46.16 Aligned_cols=192 Identities=16% Similarity=0.098 Sum_probs=116.8
Q ss_pred cccCeEEEecCCeEEEEecCCC-CceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEecc-------CC
Q 013282 140 TSKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF-------QG 209 (446)
Q Consensus 140 ~~~~~v~~~~~~~i~~w~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~-------dg 209 (446)
-+...+-...+..++||+.... .+..++.-...+ .+.+|..+.. +.++++..|- .|
T Consensus 115 is~~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L--------------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 115 ISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL--------------AGCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp CSSSEEEEEESSEEEEEESSTTCCCEEEEECCGGG--------------TTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred cCCCeEEEEcCCcEEEEcccCCCCCceeeecchhc--------------ccceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 3555666677889999987542 244555444332 2347877777 6676665443 47
Q ss_pred cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC---CCcEEEEecCcc---e------eeEeeeC--
Q 013282 210 ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFDMGKY---Q------LSKHFRF-- 275 (446)
Q Consensus 210 ~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~---dg~v~iwd~~~~---~------~~~~~~~-- 275 (446)
.+.+|..+... .+...+|.+.-..+.+--.+....+|+-+.. .+.+.|.++... . .+..+-.
T Consensus 181 ~mQLYS~er~~----sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppe 256 (365)
T 2xzh_A 181 AMQLYSVDRKV----SQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPE 256 (365)
T ss_dssp EEEEEETTTTE----EEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTT
T ss_pred eEEEEeecccc----cceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCcc
Confidence 88899987653 2344444332222222101111223333322 267888887432 1 1111111
Q ss_pred --CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccC
Q 013282 276 --PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 349 (446)
Q Consensus 276 --~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~ 349 (446)
..-.-++.+|+.-..+...+.-|.|++||+.++.++..-+-....|+..+-+....=++..+..|.|.--.+..
T Consensus 257 a~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 257 AQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred ccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 22244677888778889999999999999999999988777778888777666555566666888777766643
No 322
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=97.08 E-value=0.25 Score=48.13 Aligned_cols=218 Identities=12% Similarity=0.090 Sum_probs=120.0
Q ss_pred CCcEEEEecc-CCcEEEEEcCCCCeeeEEEEee-cCCCceeeEEEEeCCCCCeEEEEEe-------CCCcE---------
Q 013282 198 KDKLLVAGGF-QGELICKHLDRPGVSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASN-------NDCGV--------- 259 (446)
Q Consensus 198 ~~~~l~tg~~-dg~i~vw~~~~~~~~~~~~~~~-~~~~~v~~i~~~~s~~~~~~l~s~s-------~dg~v--------- 259 (446)
||++|..-.. +..|...+++..+. -++.. .....+..+.+.-.|+... +++++ +||..
T Consensus 141 DGrylfiNdkan~RvAri~l~~~~~---d~Ii~iPn~~~~Hg~~~~~~p~T~y-v~~~~e~~~P~pndg~~~~~~~~~~y 216 (638)
T 3sbq_A 141 DGKYLFINDKANSRVARIRLDIMKC---DKMITVPNVQAIHGLRLQKVPHTKY-VFANAEFIIPHPNDGKVFDLQDENSY 216 (638)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEE---EEEEECTTCSCEEEEEECCSSBCCE-EEEEECSCEESSCSSSCCCTTSTTEE
T ss_pred eeEEEEEecCCCcceEEEECCcEee---ceeEeCCCCcCcccccccccCCccE-EEecceeeccCCCCCcccccCChhhc
Confidence 7888888774 45666667766532 22222 2233345555532355553 44443 33331
Q ss_pred ---EEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecCC--------------------------------------
Q 013282 260 ---RDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNP-------------------------------------- 298 (446)
Q Consensus 260 ---~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-------------------------------------- 298 (446)
...|..+.+....+..++....+...+++++.++.+.+.
T Consensus 217 ~~f~~iD~~tm~v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~ 296 (638)
T 3sbq_A 217 TMYNAIDAETMEMAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLG 296 (638)
T ss_dssp EEEEEEETTTCSEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCT
T ss_pred eEEEEEcCCccEEEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEEC
Confidence 112333444333333344455566677888777665431
Q ss_pred --cEEEEECCC----CceEEEecCCCCceeEEEECCCCCEEEEEeC-CCcEEEEEccCCC-----------cc-eEEEec
Q 013282 299 --DGLLVDSMT----GKTIASLCGHLDFSFASAWHPNGVTFATGNQ-DKTCRIWDLRNLS-----------ES-VAVLKG 359 (446)
Q Consensus 299 --~i~i~d~~~----~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~-d~~v~iwd~~~~~-----------~~-~~~~~~ 359 (446)
.+.+.|.+. +..+..+-.-......+..+|+|++++.++. +.++.++|+++.. .. +.....
T Consensus 297 g~gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~ 376 (638)
T 3sbq_A 297 DSKTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPEL 376 (638)
T ss_dssp TCCCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBC
T ss_pred CCCeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccC
Confidence 244444443 2111111112223356889999999888775 8899999996311 11 122222
Q ss_pred CCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC----------eeEeEeeccccCeEEEEE------cCCCCcEEEE
Q 013282 360 NLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG----------YEKEQEIDFFGEISGISF------SPDTESLFIG 421 (446)
Q Consensus 360 ~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~----------~~~~~~~~~~~~v~~~~~------spdg~~l~~~ 421 (446)
.-.....+|.++|.-..+--.|..|.-|++... ..+..+.-| ..+-.+.- .|+|++|++.
T Consensus 377 -GlGPlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~-YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 377 -GLGPLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVH-YQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp -CSCEEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECS-SCEEEEEETTTTSTTCCSCEEEEE
T ss_pred -CCcccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccc-cCCcccccCCCccCCCCccEEEEe
Confidence 234668899999954455558999999998753 223333323 23334433 5789999877
No 323
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.07 E-value=0.11 Score=48.45 Aligned_cols=138 Identities=10% Similarity=0.112 Sum_probs=77.0
Q ss_pred eeeEEEEeCCCCCeEEEEEeCCCcEEEEecCccee--eEeee----CCCCeeEEEECCC---CCEEEEEec-C-----Cc
Q 013282 235 TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQL--SKHFR----FPWPVNHSSQSPD---GKLLIIVGD-N-----PD 299 (446)
Q Consensus 235 v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~--~~~~~----~~~~v~~~~~sp~---~~~l~~~~~-d-----~~ 299 (446)
...+.+ .|+|. +++ +...|.|++++ .++. +..+. .......++++|+ +..|.++.. . +.
T Consensus 33 P~~ia~--~pdG~-l~V-~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 33 PWALAF--LPDGG-MLI-AERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp EEEEEE--CTTSC-EEE-EETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred ceEEEE--cCCCe-EEE-EeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 345555 89997 444 45669999998 3332 22111 2346889999998 555554433 2 57
Q ss_pred EEEEECCCCc-----eE-EEec---CCCCceeEEEECCCCCEEEEEeC-------------CCcEEEEEccCC-------
Q 013282 300 GLLVDSMTGK-----TI-ASLC---GHLDFSFASAWHPNGVTFATGNQ-------------DKTCRIWDLRNL------- 350 (446)
Q Consensus 300 i~i~d~~~~~-----~~-~~~~---~~~~~v~~~~~~p~~~~l~sgs~-------------d~~v~iwd~~~~------- 350 (446)
|..++...++ .+ ..+. +.......++|.|+|.+.++.+. .+.|.-++....
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf 186 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPF 186 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTT
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcc
Confidence 8888876432 11 1132 11123368999999987766432 145555555210
Q ss_pred -----CcceEEEecCCCceEEEEEcc-CCCEEEEE
Q 013282 351 -----SESVAVLKGNLGAIRSIRYTS-DGRYMATA 379 (446)
Q Consensus 351 -----~~~~~~~~~~~~~v~~l~~s~-dg~~l~~~ 379 (446)
......-.++. ....++|+| +|+++++-
T Consensus 187 ~~~~~~~~~i~a~G~r-np~g~a~d~~~g~l~v~d 220 (352)
T 2ism_A 187 LGRRGARPEVYSLGHR-NPQGLAWHPKTGELFSSE 220 (352)
T ss_dssp TTCTTSCTTEEEECCS-EECCCEECTTTCCEEEEE
T ss_pred cCCCCCCccEEEEcCC-CcccEEEECCCCCEEEEE
Confidence 01111122333 356899999 66655543
No 324
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=97.05 E-value=0.042 Score=51.08 Aligned_cols=223 Identities=12% Similarity=-0.009 Sum_probs=106.4
Q ss_pred EeCCcEEEEeccCC-cEEEEEcCCCCeeeEEEEeecC-CCcee-eEEEEeCCCCCeEEEEEeC-C---------CcEEEE
Q 013282 196 AVKDKLLVAGGFQG-ELICKHLDRPGVSFCSRTTYDD-NAITN-AVEIYGSPSGAVHFTASNN-D---------CGVRDF 262 (446)
Q Consensus 196 ~~~~~~l~tg~~dg-~i~vw~~~~~~~~~~~~~~~~~-~~~v~-~i~~~~s~~~~~~l~s~s~-d---------g~v~iw 262 (446)
.+++.+++.||.++ .+.++|+........ ....-. ..... ++.. -++ .+++.|+. + ..+.+|
T Consensus 17 ~~~~~iyv~GG~~~~~~~~~d~~~~~~~W~-~~~~~p~~~R~~~~~~~---~~~-~lyv~GG~~~~~~~~~~~~~~v~~y 91 (357)
T 2uvk_A 17 IDNDTVYIGLGSAGTAWYKLDTQAKDKKWT-ALAAFPGGPRDQATSAF---IDG-NLYVFGGIGKNSEGLTQVFNDVHKY 91 (357)
T ss_dssp EETTEEEEECGGGTTCEEEEETTSSSCCEE-ECCCCTTCCCBSCEEEE---ETT-EEEEECCEEECTTSCEEECCCEEEE
T ss_pred EECCEEEEEeCcCCCeEEEEccccCCCCee-ECCCCCCCcCccceEEE---ECC-EEEEEcCCCCCCCccceeeccEEEE
Confidence 34888888888654 577888764221111 111111 11111 1222 133 36666655 2 468899
Q ss_pred ecCcceeeEeeeCC-C-CeeEEEECCCCCEEEEEecC---------------------------------------CcEE
Q 013282 263 DMGKYQLSKHFRFP-W-PVNHSSQSPDGKLLIIVGDN---------------------------------------PDGL 301 (446)
Q Consensus 263 d~~~~~~~~~~~~~-~-~v~~~~~sp~~~~l~~~~~d---------------------------------------~~i~ 301 (446)
|+.+.+-...-... . .....+...++++++.|+.+ ..+.
T Consensus 92 d~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 171 (357)
T 2uvk_A 92 NPKTNSWVKLMSHAPMGMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLL 171 (357)
T ss_dssp ETTTTEEEECSCCCSSCCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEE
T ss_pred eCCCCcEEECCCCCCcccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEE
Confidence 99876644332211 1 12222222567777888754 5789
Q ss_pred EEECCCCce--EEEecCCCCceeEEEECCCCCEEEEEeC------CCcEEEEEccCCCcceEEEec---CCCceEEEEEc
Q 013282 302 LVDSMTGKT--IASLCGHLDFSFASAWHPNGVTFATGNQ------DKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYT 370 (446)
Q Consensus 302 i~d~~~~~~--~~~~~~~~~~v~~~~~~p~~~~l~sgs~------d~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s 370 (446)
+||+.+.+- +..+......-.+++.. ++++++.|+. ...+.+||+......-..+.. ........+..
T Consensus 172 ~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~~~~~ 250 (357)
T 2uvk_A 172 SFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGGFAGI 250 (357)
T ss_dssp EEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSCEEEE
T ss_pred EEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccceEEE
Confidence 999987642 22222111111223322 5677777764 235777876211222222221 11111111223
Q ss_pred cCCCEEEEEeCC----------------------CeEEEEEcCCCee--EeEeeccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 371 SDGRYMATAEPA----------------------DFVHVYDVKSGYE--KEQEIDFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 371 ~dg~~l~~~~~d----------------------g~i~iwd~~~~~~--~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
.++++++.|+.+ ..+.+||+.+.+- +..+...... ..+...+++.++.|+.+..
T Consensus 251 ~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~--~~~~~~~~~i~v~GG~~~~ 328 (357)
T 2uvk_A 251 SNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAY--GVSLPWNNSLLIIGGETAG 328 (357)
T ss_dssp ETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBS--SEEEEETTEEEEEEEECGG
T ss_pred ECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccc--ceeEEeCCEEEEEeeeCCC
Confidence 456667776632 2478999887542 2222211111 2223346788888887654
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.99 E-value=0.1 Score=47.34 Aligned_cols=186 Identities=13% Similarity=0.088 Sum_probs=95.8
Q ss_pred EeCCcEEEEecc----C-----CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCC-----CcEEE
Q 013282 196 AVKDKLLVAGGF----Q-----GELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNND-----CGVRD 261 (446)
Q Consensus 196 ~~~~~~l~tg~~----d-----g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~d-----g~v~i 261 (446)
..++.+++.||. + ..+.+||+.+....... ......... ++.. -++. +++.|+.+ ..+.+
T Consensus 68 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~-~~~~---~~~~-iyv~GG~~~~~~~~~~~~ 141 (308)
T 1zgk_A 68 VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA-PMSVPRNRI-GVGV---IDGH-IYAVGGSHGCIHHNSVER 141 (308)
T ss_dssp EETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC-CCSSCCBTC-EEEE---ETTE-EEEECCEETTEECCCEEE
T ss_pred EECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC-CCCcCcccc-EEEE---ECCE-EEEEcCCCCCcccccEEE
Confidence 448888999987 3 35778887765422111 111111111 1111 1333 56666533 35888
Q ss_pred EecCcceeeEeeeCC--CCeeEEEECCCCCEEEEEecC-----CcEEEEECCCCceEE--EecCCCCceeEEEECCCCCE
Q 013282 262 FDMGKYQLSKHFRFP--WPVNHSSQSPDGKLLIIVGDN-----PDGLLVDSMTGKTIA--SLCGHLDFSFASAWHPNGVT 332 (446)
Q Consensus 262 wd~~~~~~~~~~~~~--~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~~--~~~~~~~~v~~~~~~p~~~~ 332 (446)
||+.+.+-...-..+ ..-.+++. -++++++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++++
T Consensus 142 yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 218 (308)
T 1zgk_A 142 YEPERDEWHLVAPMLTRRIGVGVAV-LNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCI 218 (308)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred ECCCCCeEeECCCCCccccceEEEE-ECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEE
Confidence 998876544332211 11112222 256677777653 468899988764322 11111111222333 6778
Q ss_pred EEEEeCC-----CcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCe
Q 013282 333 FATGNQD-----KTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGY 394 (446)
Q Consensus 333 l~sgs~d-----~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~ 394 (446)
++.|+.+ ..+.+||+.. .+ -..+.. .......+. -++++++.|+.+ ..|.+||+.+.+
T Consensus 219 yv~GG~~~~~~~~~v~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 219 YAAGGYDGQDQLNSVERYDVET-ET-WTFVAPMKHRRSALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp EEECCBCSSSBCCCEEEEETTT-TE-EEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred EEEeCCCCCCccceEEEEeCCC-Cc-EEECCCCCCCccceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 8888764 4689999854 22 222211 111122222 256777777643 358888888764
No 326
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.95 E-value=0.25 Score=45.93 Aligned_cols=223 Identities=15% Similarity=0.069 Sum_probs=113.5
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEE----EeecCCCceeeEEEEeCCC---CCeEEEEEeC-------
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSR----TTYDDNAITNAVEIYGSPS---GAVHFTASNN------- 255 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~----~~~~~~~~v~~i~~~~s~~---~~~~l~s~s~------- 255 (446)
-..|++ +|+.|+.+...|.|++++.... ...... .......-...+.+ +|+ +..+.++-+.
T Consensus 20 P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~-~~~~~~~~~~v~~~g~~g~~gia~--~pdf~~~g~lYv~~~~~~~~g~~ 96 (353)
T 2g8s_A 20 PWALAFLPDNHGMLITLRGGELRHWQAGKG-LSAPLSGVPDVWAHGQGGLLDVVL--APDFAQSRRIWLSYSEVGDDGKA 96 (353)
T ss_dssp EEEEEECSTTCCEEEEETTTEEEEEETTTE-ECCCCBSCCCCCCSTTCSEEEEEE--CTTHHHHCEEEEEEEEECSSSCE
T ss_pred cEEEEEcCCCCEEEEEeCCceEEEEeCCCc-eeeEecCCcccccCCCCCceeEEE--CCCCCCCCEEEEEEeCCCCCCCc
Confidence 456666 7772444556798888874321 100000 00111122344555 885 4444444332
Q ss_pred CCcEEEEecCcc-----eeeEeee-CC------CCeeEEEECCCCCEEEEEecC-------------CcEEEEECCCCc-
Q 013282 256 DCGVRDFDMGKY-----QLSKHFR-FP------WPVNHSSQSPDGKLLIIVGDN-------------PDGLLVDSMTGK- 309 (446)
Q Consensus 256 dg~v~iwd~~~~-----~~~~~~~-~~------~~v~~~~~sp~~~~l~~~~~d-------------~~i~i~d~~~~~- 309 (446)
...|..|++... .....+. .+ .....++|.|+|.+.++.++. |.|.-++....-
T Consensus 97 ~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p 176 (353)
T 2g8s_A 97 GTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIP 176 (353)
T ss_dssp EEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCC
T ss_pred eeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCC
Confidence 235666665432 1111111 11 124579999999766665442 457666754220
Q ss_pred -----------eEEEe-cCCCCceeEEEECC-CCCEEEEEeC-CCcEEEEEccCC-------------------------
Q 013282 310 -----------TIASL-CGHLDFSFASAWHP-NGVTFATGNQ-DKTCRIWDLRNL------------------------- 350 (446)
Q Consensus 310 -----------~~~~~-~~~~~~v~~~~~~p-~~~~l~sgs~-d~~v~iwd~~~~------------------------- 350 (446)
....+ .++. ....++|+| .|.++++-.. ++.=.|.-+...
T Consensus 177 ~~npf~~~~~~~~~i~a~G~r-np~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~~~~~ 255 (353)
T 2g8s_A 177 DDNPFIKESGVRAEIWSYGIR-NPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPEAKGE 255 (353)
T ss_dssp TTCTTTTSTTSCTTEEEECCS-EEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTTCCBS
T ss_pred CCCCCcCCCCCCccEEEEcCc-CccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCcccCC
Confidence 11111 2333 357899999 6665554322 211222222110
Q ss_pred -----CcceEEEecCCCceEEEEEcc-------CCCEEEEEeCCCeEEEEEcCCCeeEeE--ee-ccccCeEEEEEcCCC
Q 013282 351 -----SESVAVLKGNLGAIRSIRYTS-------DGRYMATAEPADFVHVYDVKSGYEKEQ--EI-DFFGEISGISFSPDT 415 (446)
Q Consensus 351 -----~~~~~~~~~~~~~v~~l~~s~-------dg~~l~~~~~dg~i~iwd~~~~~~~~~--~~-~~~~~v~~~~~spdg 415 (446)
..++..+..| ..+..++|.. +|.++++.-..+.|...++..+..... +. .....+.++++.|||
T Consensus 256 ~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG 334 (353)
T 2g8s_A 256 IVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDG 334 (353)
T ss_dssp SCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTS
T ss_pred CCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCC
Confidence 1122333333 3567788864 466766666678888888876643322 22 234579999999999
Q ss_pred CcEE
Q 013282 416 ESLF 419 (446)
Q Consensus 416 ~~l~ 419 (446)
.+.+
T Consensus 335 ~lyv 338 (353)
T 2g8s_A 335 YLYV 338 (353)
T ss_dssp CEEE
T ss_pred cEEE
Confidence 8444
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.91 E-value=0.32 Score=52.74 Aligned_cols=221 Identities=13% Similarity=0.087 Sum_probs=128.0
Q ss_pred CcEEEEEcCCCCeeeEEEEeecCCCceeeEEEE-eCCCCCeEEEEEe----------CCCcEEEEecCcceeeEe--eeC
Q 013282 209 GELICKHLDRPGVSFCSRTTYDDNAITNAVEIY-GSPSGAVHFTASN----------NDCGVRDFDMGKYQLSKH--FRF 275 (446)
Q Consensus 209 g~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~-~s~~~~~~l~s~s----------~dg~v~iwd~~~~~~~~~--~~~ 275 (446)
+.|++.|..+..... ...-..+..+.++... +..+...+|++|. ..|.|.+|++..++.... ...
T Consensus 807 s~i~lidp~t~~~i~--~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v 884 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLH--AHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEV 884 (1158)
T ss_dssp EEEEEEETTTCCEEE--EEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEeCCCCeEEE--EEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEc
Confidence 346666655444332 1222334445555433 2333345677775 357899999865544333 336
Q ss_pred CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceE
Q 013282 276 PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVA 355 (446)
Q Consensus 276 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~ 355 (446)
.++|.+++-- +| +|++|- ..+|++|++...+.+..-..+-..+..+.....+++++.|..-..|.++-.+.....+.
T Consensus 885 ~g~v~al~~~-~g-~Lla~i-g~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~ 961 (1158)
T 3ei3_A 885 KGAVYSMVEF-NG-KLLASI-NSTVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEGNFE 961 (1158)
T ss_dssp SSCEEEEEEE-TT-EEEEEE-TTEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTTEEE
T ss_pred CCcCEEEeee-CC-EEEEEc-CCEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCCeEE
Confidence 7888887743 45 444443 46899999986654441111112233333333578899998877777766544333444
Q ss_pred EEe--cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCC-------eeEeEe--eccccCeEEEE---EcCCC------
Q 013282 356 VLK--GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSG-------YEKEQE--IDFFGEISGIS---FSPDT------ 415 (446)
Q Consensus 356 ~~~--~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~-------~~~~~~--~~~~~~v~~~~---~spdg------ 415 (446)
.+. .+..+++++.|-.++ .++.+..+|.|.+...... ..+... ......|+++. +.+.+
T Consensus 962 ~~a~D~~~~~vta~~~ld~~-t~l~aD~~gNl~vl~~~~~~~~~~~~~~L~~~~~fhlG~~vt~~~~~sl~~~~~~~~~~ 1040 (1158)
T 3ei3_A 962 EIARDFNPNWMSAVEILDDD-NFLGAENAFNLFVCQKDSAATTDEERQHLQEVGLFHLGEFVNVFCHGSLVMQNLGETST 1040 (1158)
T ss_dssp EEEECCSCBCEEEEEEEETT-EEEEEETTSEEEEEEECTTCCSTTGGGBEEEEEEEECSSCEEEEEECCSCCC-------
T ss_pred EEEeecccccEEEEEEEccC-cEEEEcCCCcEEEEecCCCCCCccccceeeeEEEEeCCCcEeeEEeeeeecCCCccccc
Confidence 443 245578888887654 6777899999999976542 112111 11234566665 33322
Q ss_pred ---CcEEEEEecCCcceEEEEec
Q 013282 416 ---ESLFIGVWDRTYGSLLEYGR 435 (446)
Q Consensus 416 ---~~l~~~~~D~~~~~~l~~~~ 435 (446)
..++.++.+|.++.+..+..
T Consensus 1041 ~~~~~il~~T~~GsIg~l~pl~~ 1063 (1158)
T 3ei3_A 1041 PTQGSVLFGTVNGMIGLVTSLSE 1063 (1158)
T ss_dssp CEEEEEEEEETTSCEEEEEEECH
T ss_pred cccceEEEEecCCEEEEEEEcCH
Confidence 34778899999999988753
No 328
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=96.90 E-value=0.13 Score=52.75 Aligned_cols=224 Identities=13% Similarity=0.051 Sum_probs=114.8
Q ss_pred eCCcEEEEeccC----CcEEEEEcCCCCeeeEEEEee---cCCCceeeEEEEeCCCCCeEEEEEeCC------CcEEEEe
Q 013282 197 VKDKLLVAGGFQ----GELICKHLDRPGVSFCSRTTY---DDNAITNAVEIYGSPSGAVHFTASNND------CGVRDFD 263 (446)
Q Consensus 197 ~~~~~l~tg~~d----g~i~vw~~~~~~~~~~~~~~~---~~~~~v~~i~~~~s~~~~~~l~s~s~d------g~v~iwd 263 (446)
.++.+++.||.+ ..+.+||..+........... ...............++. +++.|+.+ ..+.+||
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~-lyv~GG~~~~~~~~~dv~~yd 474 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQ-LLLIGGRKAPHQGLSDNWIFD 474 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTE-EEEECCBSSTTCBCCCCEEEE
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCE-EEEEcCCCCCCCccccEEEEe
Confidence 588889999864 357788887765432210100 011111111111121444 66776643 3578899
Q ss_pred cCcceeeEeee--CCCCeeEEEECCCCCEEEEEecCC--cEEEEECCCCceEEE-----ecCCCCceeEEEECCC-CCEE
Q 013282 264 MGKYQLSKHFR--FPWPVNHSSQSPDGKLLIIVGDNP--DGLLVDSMTGKTIAS-----LCGHLDFSFASAWHPN-GVTF 333 (446)
Q Consensus 264 ~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~--~i~i~d~~~~~~~~~-----~~~~~~~v~~~~~~p~-~~~l 333 (446)
+.+.+-...-. .+..-.+++.-.++++++.||.++ .+.+||+.+.+-... +........++.+... ++++
T Consensus 475 ~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 475 MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 88755433322 222222333334788888887654 789999987652221 1111122233555554 7788
Q ss_pred EEEeC--C-----CcEEEEEccCCCc--c--eEEEec----CCCceEEEEEccCCCEEEEEeC--------CCeEEEEEc
Q 013282 334 ATGNQ--D-----KTCRIWDLRNLSE--S--VAVLKG----NLGAIRSIRYTSDGRYMATAEP--------ADFVHVYDV 390 (446)
Q Consensus 334 ~sgs~--d-----~~v~iwd~~~~~~--~--~~~~~~----~~~~v~~l~~s~dg~~l~~~~~--------dg~i~iwd~ 390 (446)
+.|+. + ..+.+||+....- . ...+.. ..... ++....++++++.|+. ...|.+||+
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~ 633 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDP 633 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEET
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEEC
Confidence 88876 2 3588999865320 0 122211 11112 2233333677777764 345999999
Q ss_pred CCCeeEeEeeccccCe----------EEEEEcCCCCcEEEEEec
Q 013282 391 KSGYEKEQEIDFFGEI----------SGISFSPDTESLFIGVWD 424 (446)
Q Consensus 391 ~~~~~~~~~~~~~~~v----------~~~~~spdg~~l~~~~~D 424 (446)
.+..-. ... ..... .++...++|+.++.|+..
T Consensus 634 ~t~~W~-~~~-~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~ 675 (695)
T 2zwa_A 634 LSETLT-SIP-ISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGA 675 (695)
T ss_dssp TTTEEE-ECC-CCHHHHHHSCCCCSSCEEECC---CEEEECCEE
T ss_pred CCCeEE-Eee-ccccccCCCCccceeeeEEEeCCCEEEEEeCCc
Confidence 887543 111 11100 234444566777777654
No 329
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.89 E-value=0.21 Score=48.19 Aligned_cols=103 Identities=13% Similarity=0.071 Sum_probs=60.0
Q ss_pred CeeEEEECCCCCEEEEEecCCcEEEEECCCCceE--EEecC------CCCceeEEEECCC---CCEEEEE-eC-------
Q 013282 278 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI--ASLCG------HLDFSFASAWHPN---GVTFATG-NQ------- 338 (446)
Q Consensus 278 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~--~~~~~------~~~~v~~~~~~p~---~~~l~sg-s~------- 338 (446)
....|+|.|+|+++++-...+.|++++..+++.. ..+.. .......|+|+|+ +..|+.. +.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4679999999997766544457988887655432 22221 2456779999994 4444443 32
Q ss_pred -----CCcEEEEEccCCC------cce-EEEec-CCCceEEEEEccCCCEEEEEe
Q 013282 339 -----DKTCRIWDLRNLS------ESV-AVLKG-NLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 339 -----d~~v~iwd~~~~~------~~~-~~~~~-~~~~v~~l~~s~dg~~l~~~~ 380 (446)
...|.-+++.... +.+ ..+.. .......|+|.|||.+.++.+
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 1245555543211 111 11221 112468899999998666544
No 330
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.86 E-value=0.47 Score=47.76 Aligned_cols=209 Identities=9% Similarity=0.022 Sum_probs=121.2
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
.+.++++ ++.++++-...+.|..++++..... .+..........+++ .+.+..+.++-+..+.|.+.++...
T Consensus 350 ~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~---~v~~~~~~~p~GlAv--D~~~~~lY~tD~~~~~I~v~~~~G~ 424 (619)
T 3s94_A 350 HAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQ---FVVTAQIAHPDGIAV--DWVARNLYWTDTGTDRIEVTRLNGT 424 (619)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE---EEECSSCSCCCEEEE--ETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccE---EEEECCCCCcCceEE--ecccCcEEEEeCCCCcEEEEeCCCC
Confidence 3667777 3455555566788888888654332 222222334567777 5555556777677889999998754
Q ss_pred eeeEeee-CCCCeeEEEECCCCCEEEEEe--cCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEe-CCCcEE
Q 013282 268 QLSKHFR-FPWPVNHSSQSPDGKLLIIVG--DNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCR 343 (446)
Q Consensus 268 ~~~~~~~-~~~~v~~~~~sp~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~ 343 (446)
.....+. .-.....+++.|....|..+. ..+.|...++............-.....+++.+.+..|+.+. ..+.|.
T Consensus 425 ~~~~l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~~~~I~ 504 (619)
T 3s94_A 425 MRKILISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDRVVLVNTSLGWPNGLALDYDEGKIYWGDAKTDKIE 504 (619)
T ss_dssp SCEEEECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCccEEEEeCCCCCCeeeEEcccCCEEEEEECCCCEEE
Confidence 3322222 334578999999644554443 246677777653322222333345678999998666665554 457888
Q ss_pred EEEccCCCcceEEE-ecCCCceEEEEEccCCCEEEEEe-CCCeEEEEEcCCCeeEeEeeccccCeEEE
Q 013282 344 IWDLRNLSESVAVL-KGNLGAIRSIRYTSDGRYMATAE-PADFVHVYDVKSGYEKEQEIDFFGEISGI 409 (446)
Q Consensus 344 iwd~~~~~~~~~~~-~~~~~~v~~l~~s~dg~~l~~~~-~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 409 (446)
..++.. ...+++ ........+|+...+ +|+.+. ..+.|...|..++.. ..+......+.++
T Consensus 505 ~~~~dG--~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g~~-~~~~~~~~~~~~i 567 (619)
T 3s94_A 505 VMNTDG--TGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSAER-EVIIDQLPDLMGL 567 (619)
T ss_dssp EEESSS--CCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSCCE-EEEECSCCCEEEE
T ss_pred EEecCC--CceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCCce-EEEecCCCCCcee
Confidence 899843 222332 222223345666543 555544 456788888888733 3333333334444
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.85 E-value=0.33 Score=45.87 Aligned_cols=191 Identities=16% Similarity=0.094 Sum_probs=119.6
Q ss_pred ccCeEEEecCCeEEEEecCCC-CceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEecc-------CCc
Q 013282 141 SKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGGF-------QGE 210 (446)
Q Consensus 141 ~~~~v~~~~~~~i~~w~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~~-------dg~ 210 (446)
+...+-...+..|+||+.... .+..++.-.+.+ .+.+|..+.. +.++++..|- .|.
T Consensus 115 s~~~l~lVT~taVyHWsi~~~s~P~kvFdR~~~L--------------~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 180 (494)
T 1bpo_A 115 SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSL--------------AGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (494)
T ss_dssp ETTEEEEECSSEEEEEESSSSCCCEEEEECCGGG--------------TTCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred CCCeEEEEcCCeeEEecccCCCCchhheecchhc--------------ccceEEEEEECCCCCeEEEEeecccCCcccce
Confidence 455566677889999997542 234555444332 2347877777 6677765442 478
Q ss_pred EEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC---CCcEEEEecCcc---e------eeEeeeC---
Q 013282 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFDMGKY---Q------LSKHFRF--- 275 (446)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~---dg~v~iwd~~~~---~------~~~~~~~--- 275 (446)
+.+|..+.... +...+|.+.-..+.+--.+....+|+-+.. .+.+.|.++... . .+..+-.
T Consensus 181 mQLYS~er~~s----Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~ 256 (494)
T 1bpo_A 181 MQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (494)
T ss_dssp EEEEESTTCCE----EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTS
T ss_pred EEEeecccccc----chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCccc
Confidence 89999876542 334454433322222101111223443433 278888888432 1 1111111
Q ss_pred -CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccC
Q 013282 276 -PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRN 349 (446)
Q Consensus 276 -~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~ 349 (446)
..-.-++.+++.-..+...+.-|.|++||+.++.++..-+-....|+..+-+....=++..+..|.|.--.+..
T Consensus 257 ~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp TTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred ccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 22245788888888899999999999999999999988777778888777776666677777888777776643
No 332
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.84 E-value=0.12 Score=46.98 Aligned_cols=165 Identities=13% Similarity=0.073 Sum_probs=95.2
Q ss_pred CCCCeEEEEEe-CCCcEEEEecCcceeeEeeeCCCCeeEEEECCCCCEEEEEecC--------------CcEEEEECCCC
Q 013282 244 PSGAVHFTASN-NDCGVRDFDMGKYQLSKHFRFPWPVNHSSQSPDGKLLIIVGDN--------------PDGLLVDSMTG 308 (446)
Q Consensus 244 ~~~~~~l~s~s-~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------------~~i~i~d~~~~ 308 (446)
.++..+.++.. .++.|+..+.....+ ..+.. -.+--+++++.+|+.+... ..|+..++..+
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~-~~l~~---~~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNI-HKLSN---DTAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSC-EEEEE---EEEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCC-EEccC---CceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 44554444432 345566666544332 22221 1234457889988777643 36777787766
Q ss_pred ceEEEecCCCCceeEEEECCCCCEEEEEe--CCCcEEEEEccCCCcceEEEecCCCceEEEEEccCCCEEEEEeC-CCeE
Q 013282 309 KTIASLCGHLDFSFASAWHPNGVTFATGN--QDKTCRIWDLRNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEP-ADFV 385 (446)
Q Consensus 309 ~~~~~~~~~~~~v~~~~~~p~~~~l~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~-dg~i 385 (446)
+... +.. .. +..|+|++++|+-.. .++.-.||-+...+.....+..+.. .+|+|+|+.|+..+. ...|
T Consensus 99 ~~~~-l~~--~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 99 GSTV-LDP--DP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCEE-EEC--SC--EEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCEEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred cceE-eec--CC--ccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeEEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 5332 321 12 236778888888776 3444455544433555566655432 457889998887665 5788
Q ss_pred EEEEcCCCeeEeEeeccccCeEEEEEcCCCCcEEEEEecC
Q 013282 386 HVYDVKSGYEKEQEIDFFGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 386 ~iwd~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
.+.++..+... .+.. +... ..++|++.+|+-..+..
T Consensus 170 y~~~l~g~~~~-~l~~--~~~~-~~~~P~g~~iy~t~~~~ 205 (302)
T 3s25_A 170 YRYDTASQSEA-LFYD--CNCY-KPVVLDDTNVYYMDVNR 205 (302)
T ss_dssp EEEETTTTEEE-EEEC--SCEE-EEEEEETTEEEEEEGGG
T ss_pred EEEECCCCCEE-EEeC--CCcc-ceeeecCCEEEEEEcCC
Confidence 88898776543 3322 2222 34568888887665543
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.82 E-value=0.11 Score=48.08 Aligned_cols=163 Identities=13% Similarity=0.094 Sum_probs=88.4
Q ss_pred CCeeEEEECCCCCEEEEEecCCcEEEEECCCCceE--EEe----cCCCCceeEEEECCC----CCEEEEEe--CCCcEEE
Q 013282 277 WPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTI--ASL----CGHLDFSFASAWHPN----GVTFATGN--QDKTCRI 344 (446)
Q Consensus 277 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~--~~~----~~~~~~v~~~~~~p~----~~~l~sgs--~d~~v~i 344 (446)
.....|+|.|+|.++++--..|.|++++..+++.. ..+ .........++++|+ +.+.++-+ .++.|.-
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R 111 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVR 111 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEE
Confidence 45679999999997666655899999987666532 222 123456789999995 44434322 3445555
Q ss_pred EEccCC-------Ccce---EEEec-CCCceEEEEEccCCCEEEEEeC-------------CCeEEEEEcCCCe------
Q 013282 345 WDLRNL-------SESV---AVLKG-NLGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSGY------ 394 (446)
Q Consensus 345 wd~~~~-------~~~~---~~~~~-~~~~v~~l~~s~dg~~l~~~~~-------------dg~i~iwd~~~~~------ 394 (446)
|.+... .... ..+.. .......|+|.|||.+.++.+. .|.|.-++....-
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf 191 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPF 191 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSS
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCC
Confidence 655321 0111 12221 1113457999999986665432 3555555554220
Q ss_pred -eEeEe-eccccCeEEEEEcCCCCcEEEEEecCC-cceEEEEecccCcee
Q 013282 395 -EKEQE-IDFFGEISGISFSPDTESLFIGVWDRT-YGSLLEYGRCRNYSY 441 (446)
Q Consensus 395 -~~~~~-~~~~~~v~~~~~spdg~~l~~~~~D~~-~~~~l~~~~~~~~~~ 441 (446)
....+ .+|. ...+++|+|+|.+ +++-.... ...+-....+.++.|
T Consensus 192 ~~~~i~a~G~R-Np~Gla~dp~G~L-~~~d~g~~~~deln~i~~G~nyGw 239 (347)
T 3das_A 192 PGSPVYSYGHR-NVQGLAWDDKQRL-FASEFGQDTWDELNAIKPGDNYGW 239 (347)
T ss_dssp TTCCEEEBCCS-BCCEEEECTTCCE-EEEECCSSSCEEEEEECTTCBCCT
T ss_pred CCCeEEeeCCC-CcceEEECCCCCE-EEEecCCCCCceeeEEcCCCEecC
Confidence 01111 2333 3668999998764 44432222 223333344444444
No 334
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=96.78 E-value=0.11 Score=47.28 Aligned_cols=182 Identities=10% Similarity=0.077 Sum_probs=90.2
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC----CC-------cEEEEecCcc
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN----DC-------GVRDFDMGKY 267 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~----dg-------~v~iwd~~~~ 267 (446)
+.+++.|+.+ +.+||..+..... ............... ..++. +++.|+. ++ .+.+||+.+.
T Consensus 16 ~~i~~~GG~~--~~~yd~~~~~W~~--~~~~~~~~r~~~~~~--~~~~~-lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~ 88 (318)
T 2woz_A 16 DLILLVNDTA--AVAYDPMENECYL--TALAEQIPRNHSSIV--TQQNQ-VYVVGGLYVDEENKDQPLQSYFFQLDNVSS 88 (318)
T ss_dssp EEEEEECSSE--EEEEETTTTEEEE--EEECTTSCSSEEEEE--CSSSC-EEEEESSCC-------CCCBEEEEEETTTT
T ss_pred chhhhccccc--eEEECCCCCceec--ccCCccCCccceEEE--EECCE-EEEECCcccCccccCCCccccEEEEeCCCC
Confidence 3456666643 7888987765432 111111111111112 34444 6666662 11 2778888776
Q ss_pred eeeEeee--CCCCeeEEEECCCCCEEEEEecC-------CcEEEEECCCCceEEE--ecCCCCceeEEEECCCCCEEEEE
Q 013282 268 QLSKHFR--FPWPVNHSSQSPDGKLLIIVGDN-------PDGLLVDSMTGKTIAS--LCGHLDFSFASAWHPNGVTFATG 336 (446)
Q Consensus 268 ~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d-------~~i~i~d~~~~~~~~~--~~~~~~~v~~~~~~p~~~~l~sg 336 (446)
+-...-. .+..-.+++. -++++++.|+.+ ..+.+||+.+.+-... +...... .+++. .++++++.|
T Consensus 89 ~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~-~~~~~-~~~~iyv~G 165 (318)
T 2woz_A 89 EWVGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYG-HNVIS-HNGMIYCLG 165 (318)
T ss_dssp EEEECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEES-CEEEE-ETTEEEEEC
T ss_pred cEEECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccc-cEEEE-ECCEEEEEc
Confidence 6543322 1111122222 256777777754 3478889887643221 1111111 11222 367777777
Q ss_pred eC------CCcEEEEEccCCCcceEEEec---CCCceEEEEEccCCCEEEEEeCC-----CeEEEEEcCCCe
Q 013282 337 NQ------DKTCRIWDLRNLSESVAVLKG---NLGAIRSIRYTSDGRYMATAEPA-----DFVHVYDVKSGY 394 (446)
Q Consensus 337 s~------d~~v~iwd~~~~~~~~~~~~~---~~~~v~~l~~s~dg~~l~~~~~d-----g~i~iwd~~~~~ 394 (446)
+. -..+.+||+.+ .+ -..+.. ......++. -+++.++.|+.+ ..+.+||+.+.+
T Consensus 166 G~~~~~~~~~~~~~yd~~~-~~-W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 166 GKTDDKKCTNRVFIYNPKK-GD-WKDLAPMKTPRSMFGVAI--HKGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CEESSSCBCCCEEEEETTT-TE-EEEECCCSSCCBSCEEEE--ETTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CCCCCCCccceEEEEcCCC-CE-EEECCCCCCCcccceEEE--ECCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 64 23588999854 22 222221 111122222 256777777643 357899988764
No 335
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.50 E-value=0.097 Score=48.71 Aligned_cols=145 Identities=8% Similarity=-0.026 Sum_probs=78.6
Q ss_pred CeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEe-------cCCCCceeEEEECCC----CCEEEEEeC-------C
Q 013282 278 PVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASL-------CGHLDFSFASAWHPN----GVTFATGNQ-------D 339 (446)
Q Consensus 278 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~-------~~~~~~v~~~~~~p~----~~~l~sgs~-------d 339 (446)
....|+|.|+|+.|+++...|.|++++.. ++....+ .........++|+|+ +.+.++-+. .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 46789999999944455667999999853 3321111 112345689999995 444444332 2
Q ss_pred CcEEEEEccCCCc---ceEE-EecC------CCceEEEEEccCCCEEEEEeC-------------CCeEEEEEcCCCe--
Q 013282 340 KTCRIWDLRNLSE---SVAV-LKGN------LGAIRSIRYTSDGRYMATAEP-------------ADFVHVYDVKSGY-- 394 (446)
Q Consensus 340 ~~v~iwd~~~~~~---~~~~-~~~~------~~~v~~l~~s~dg~~l~~~~~-------------dg~i~iwd~~~~~-- 394 (446)
..|..|++..... .... +... ......|+|.|||.+.++.+. .|.|.-++.....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~ 177 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPD 177 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCT
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCC
Confidence 3466666532111 1111 1110 112457999999965444332 2467777765320
Q ss_pred ----------eEeEeeccccCeEEEEEcCCCCcEEEEEe
Q 013282 395 ----------EKEQEIDFFGEISGISFSPDTESLFIGVW 423 (446)
Q Consensus 395 ----------~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 423 (446)
....+........+++|+|....|+++-.
T Consensus 178 ~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~ 216 (353)
T 2g8s_A 178 DNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEH 216 (353)
T ss_dssp TCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEE
T ss_pred CCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEec
Confidence 11111111234789999994445555543
No 336
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.47 E-value=1 Score=46.52 Aligned_cols=250 Identities=11% Similarity=0.015 Sum_probs=133.5
Q ss_pred cccCeEEEecCCeEEEEecCCCCceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccCCcEEEEEcCCC
Q 013282 140 TSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQGELICKHLDRP 219 (446)
Q Consensus 140 ~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~ 219 (446)
...+.++......+..++..+.+... ... . ....|.++......|..|+.+ .|..++..+.
T Consensus 71 d~~g~lWigT~~Gl~~yd~~~~~f~~---~~~------~---------~~~~i~~i~~~~g~lWigt~~-Gl~~~~~~~~ 131 (758)
T 3ott_A 71 IDNTYLYMGTDNGILVYNYRADRYEQ---PET------D---------FPTDVRTMALQGDTLWLGALN-GLYTYQLQSR 131 (758)
T ss_dssp ETTTEEEEEETTEEEEEETTTTEECC---CSC------C---------CCSCEEEEEEETTEEEEEETT-EEEEEETTTC
T ss_pred cCCCcEEEEeCCCeEEEeCCCCEEEC---ccc------C---------CCceEEEEEecCCcEEEEcCC-cceeEeCCCC
Confidence 34555666555667778876542111 000 0 011466665544456666666 4778887654
Q ss_pred CeeeEEEEe--ecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeeeC------CCCeeEEEECCCCCEE
Q 013282 220 GVSFCSRTT--YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFRF------PWPVNHSSQSPDGKLL 291 (446)
Q Consensus 220 ~~~~~~~~~--~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~~------~~~v~~~~~sp~~~~l 291 (446)
.... .... ......|.++.. .++|. |..|+.. .|..++..+++....... ...|.++...+++..|
T Consensus 132 ~~~~-~~~~~~~l~~~~i~~i~~--d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~l 205 (758)
T 3ott_A 132 KLTS-FDTRRNGLPNNTIYSIIR--TKDNQ--IYVGTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCV 205 (758)
T ss_dssp CEEE-ECHHHHCCSCSCEEEEEE--CTTCC--EEEEETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEE
T ss_pred eEEE-eccCCCCcCCCeEEEEEE--cCCCC--EEEEeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEE
Confidence 4221 1000 011233555544 66775 3344444 577888877654322111 1237888877777767
Q ss_pred EEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEEec--------CCCc
Q 013282 292 IIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVLKG--------NLGA 363 (446)
Q Consensus 292 ~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~--------~~~~ 363 (446)
.+|+. +-+..+|..+++......-....|.++...++|.+.+ |+.+ -+.+++... .. ...+.. ....
T Consensus 206 Wigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~~-Gl~~~~~~~-~~-~~~~~~~~~~~~~l~~~~ 280 (758)
T 3ott_A 206 WIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTDN-GLYVYHNDT-TP-LQHIIHDSRNIQSLTNNI 280 (758)
T ss_dssp EEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EETT-EEEEECCTT-SC-CEEECCCTTCTTSCSCSC
T ss_pred EEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeCC-ceeEEecCC-Cc-EEEEEcCCCCcCcCCcCe
Confidence 66765 4688899887654322111234588888888877554 4444 477888743 22 233321 1235
Q ss_pred eEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeec-----cccCeEEEEEcCCCCcEEEEE
Q 013282 364 IRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEID-----FFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 364 v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~-----~~~~v~~~~~spdg~~l~~~~ 422 (446)
|.++....+|.+. .|+..| +.++............. ....|.++.-..+|.+. +|.
T Consensus 281 i~~i~~D~~g~lW-iGT~~G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lW-iGt 341 (758)
T 3ott_A 281 IWNIFADQEHNIW-LGTDYG-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGFYW-FGG 341 (758)
T ss_dssp EEEEEECTTCCEE-EEESSS-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCCEE-EEE
T ss_pred EEEEEEcCCCCEE-EEeCCc-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCCEE-Eee
Confidence 8899888888744 455567 55543322111111100 12357788777776644 444
No 337
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.46 E-value=0.1 Score=44.48 Aligned_cols=140 Identities=12% Similarity=0.074 Sum_probs=79.5
Q ss_pred ceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceee------Eeee---CCCCeeEEEECCCCCEEEEEecCCcEEEEE
Q 013282 234 ITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLS------KHFR---FPWPVNHSSQSPDGKLLIIVGDNPDGLLVD 304 (446)
Q Consensus 234 ~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~------~~~~---~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d 304 (446)
.+..+.| +|+|. |.+. .+|.++-.+..+.... ..+. ... -.++.|.|+|.+.++ .||.|+-++
T Consensus 42 ~~~~laf--~P~G~--LYaV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 42 NFKFLFL--SPGGE--LYGV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKAS 113 (236)
T ss_dssp TCSEEEE--CTTSC--EEEE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEES
T ss_pred cceeEEE--CCCcc--EEEE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeC
Confidence 3445555 99886 4444 7777777776552211 1121 111 478899999998877 558998887
Q ss_pred CCCCceE------EEe-cCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCc-----ceEEEe-cCCCceEEEEEcc
Q 013282 305 SMTGKTI------ASL-CGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE-----SVAVLK-GNLGAIRSIRYTS 371 (446)
Q Consensus 305 ~~~~~~~------~~~-~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~-----~~~~~~-~~~~~v~~l~~s~ 371 (446)
..+.... ..+ .+--..+..|.+.|+|.+.+.. |+.+.-+..-.... ....+. ..-...+.+.|.|
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~ 191 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSS 191 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECT
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECC
Confidence 6432111 111 1112457899999999887777 77643322211010 111222 2233456677999
Q ss_pred CCCEEEEEeCCCeE
Q 013282 372 DGRYMATAEPADFV 385 (446)
Q Consensus 372 dg~~l~~~~~dg~i 385 (446)
+|.+.++. ++.+
T Consensus 192 ~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 192 VGTLFGVQ--GGKF 203 (236)
T ss_dssp TSCEEEEE--TTEE
T ss_pred CCcEEEEe--CCeE
Confidence 99877665 6643
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.45 E-value=1 Score=46.45 Aligned_cols=214 Identities=12% Similarity=0.057 Sum_probs=121.6
Q ss_pred ceEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe-ecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcc
Q 013282 190 TQVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTT-YDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKY 267 (446)
Q Consensus 190 ~~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~-~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~ 267 (446)
..|.++.- ...+|-.|+.+| |..||-.. ... .... ......|.++.. ..+| .|..|+.+| +..||..+.
T Consensus 22 n~V~~I~qD~~G~lWigT~~G-L~ryDG~~--~~~-~~~~~~~~~~~i~~i~~--d~~g--~lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 22 SVVSCFLQDSEGLIWIGSNKG-LFSYDGYS--TQQ-HFTYGENNNTRIYCGVI--IDNT--YLYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCEEEEEECTTSCEEEEESSC-EEEECSSC--EEE-CSCTTSTTSSCEEEEEE--ETTT--EEEEEETTE-EEEEETTTT
T ss_pred ceEEEEEECCCCCEEEEECCC-ccccCCCc--eEE-EEccCCCCCceEEEEEE--cCCC--cEEEEeCCC-eEEEeCCCC
Confidence 36889988 456777788777 55666321 100 0000 111234555543 5555 355665554 889998876
Q ss_pred eeeEeee-CCCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEec-----CCCCceeEEEECCCCCEEEEEeCCCc
Q 013282 268 QLSKHFR-FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLC-----GHLDFSFASAWHPNGVTFATGNQDKT 341 (446)
Q Consensus 268 ~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~~~~p~~~~l~sgs~d~~ 341 (446)
+...... ....|.++.. .++ .|.+++.+ .+..+|..+++.. .+. .....|.++...++|.+.+ |+..|
T Consensus 93 ~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~G- 166 (758)
T 3ott_A 93 RYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYNG- 166 (758)
T ss_dssp EECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEE-EETTE-
T ss_pred EEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEE-EeCCC-
Confidence 5433111 2334666654 344 56667666 6888998776543 231 1234688888888887655 45544
Q ss_pred EEEEEccCCCcceEEEecC------CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCCC
Q 013282 342 CRIWDLRNLSESVAVLKGN------LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPDT 415 (446)
Q Consensus 342 v~iwd~~~~~~~~~~~~~~------~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spdg 415 (446)
+..++... .. ...+... ...|.++...+++..|..|+. +-|..+|..++............|.++...++|
T Consensus 167 l~~~~~~~-~~-~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 243 (758)
T 3ott_A 167 LCRYIPSN-GK-FEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG 243 (758)
T ss_dssp EEEEETTT-TE-EEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC
T ss_pred HhhCccCC-Cc-eEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC
Confidence 77788743 22 2222211 124888888877765555654 358889988764322111123457788887777
Q ss_pred CcEEEEE
Q 013282 416 ESLFIGV 422 (446)
Q Consensus 416 ~~l~~~~ 422 (446)
.+. +|.
T Consensus 244 ~lW-igT 249 (758)
T 3ott_A 244 DLL-AGT 249 (758)
T ss_dssp CEE-EEE
T ss_pred CEE-EEe
Confidence 654 444
No 339
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.29 E-value=0.68 Score=42.70 Aligned_cols=224 Identities=13% Similarity=0.087 Sum_probs=117.9
Q ss_pred EEEEEe--CCcEEEEeccCCcEEEEEcCCCCeeeEEEEe----ecCCCceeeEEEEeCCC---CCeEEEEE--eCCCcEE
Q 013282 192 VSTLAV--KDKLLVAGGFQGELICKHLDRPGVSFCSRTT----YDDNAITNAVEIYGSPS---GAVHFTAS--NNDCGVR 260 (446)
Q Consensus 192 v~~l~~--~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~----~~~~~~v~~i~~~~s~~---~~~~l~s~--s~dg~v~ 260 (446)
-..|++ +|.++++--..|.|++++........ .... .........|++ +|+ +..+.++- ..+..|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~~v~~~g~~GllGia~--~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVPGVSPSGEGGLLGIAL--SPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCBTTBSEEEEEE--CTTHHHHCEEEEEEECSSSEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccCceeecCCCCceeeEe--ccccccCCEEEEEEecCCCCEEE
Confidence 456666 78877777668999888754433211 1111 112233455555 885 33333332 2345566
Q ss_pred EEecCcc----------eee-Eeee--CCCCeeEEEECCCCCEEEEEec-------------CCcEEEEECCCC------
Q 013282 261 DFDMGKY----------QLS-KHFR--FPWPVNHSSQSPDGKLLIIVGD-------------NPDGLLVDSMTG------ 308 (446)
Q Consensus 261 iwd~~~~----------~~~-~~~~--~~~~v~~~~~sp~~~~l~~~~~-------------d~~i~i~d~~~~------ 308 (446)
-|.+..+ +.+ ..+. .......+.|.|+|.+.++.++ .|.|.-++....
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nP 190 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNP 190 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCS
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCC
Confidence 5655431 111 1121 1123456999999987777553 345555554321
Q ss_pred ---ceEEEecCCCCceeEEEECCCCCEEEEEe-CCCcEEEEEccCC-----------------CcceEEEecCCCceEEE
Q 013282 309 ---KTIASLCGHLDFSFASAWHPNGVTFATGN-QDKTCRIWDLRNL-----------------SESVAVLKGNLGAIRSI 367 (446)
Q Consensus 309 ---~~~~~~~~~~~~v~~~~~~p~~~~l~sgs-~d~~v~iwd~~~~-----------------~~~~~~~~~~~~~v~~l 367 (446)
..+. -.+|.. ...++|+|+|.++++=. .++.-.|--+... ..++..+..+..+...+
T Consensus 191 f~~~~i~-a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~ 268 (347)
T 3das_A 191 FPGSPVY-SYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGI 268 (347)
T ss_dssp STTCCEE-EBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEE
T ss_pred CCCCeEE-eeCCCC-cceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCcce
Confidence 1111 124543 46799999887666543 2332333332211 11334444333456678
Q ss_pred EEccCCCEEEEEeCCCeEEEEEcCCCeeE---eE-eeccccCeEEEEEcCCCCcEEEE
Q 013282 368 RYTSDGRYMATAEPADFVHVYDVKSGYEK---EQ-EIDFFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 368 ~~s~dg~~l~~~~~dg~i~iwd~~~~~~~---~~-~~~~~~~v~~~~~spdg~~l~~~ 421 (446)
+|. +|..+...-..+.|....+...... .. +.+..+.+..|+..|||.++++.
T Consensus 269 ~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~t 325 (347)
T 3das_A 269 AYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVT 325 (347)
T ss_dssp EEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEE
T ss_pred EEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEE
Confidence 876 4555554445556766676554321 12 22345789999999999765543
No 340
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=96.19 E-value=0.18 Score=46.75 Aligned_cols=139 Identities=14% Similarity=-0.029 Sum_probs=67.2
Q ss_pred CcEEEEecCcceeeEeee--CCCCe-eEEEECCCCCEEEEEec------CCcEEEEEC--CCCce--EEEecCCCCceeE
Q 013282 257 CGVRDFDMGKYQLSKHFR--FPWPV-NHSSQSPDGKLLIIVGD------NPDGLLVDS--MTGKT--IASLCGHLDFSFA 323 (446)
Q Consensus 257 g~v~iwd~~~~~~~~~~~--~~~~v-~~~~~sp~~~~l~~~~~------d~~i~i~d~--~~~~~--~~~~~~~~~~v~~ 323 (446)
..+.+||+.+.+-...-. .+... .+++. -++++++.|+. ...+.+||+ .+.+- +..+........+
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~-~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVN-KGDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEE-ETTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEE-ECCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 478899998765444333 22222 23332 25666677653 346778887 33321 1112111111111
Q ss_pred EEECCCCCEEEEEeCC----------------------CcEEEEEccCC-CcceEEEecCCCceEEEEEccCCCEEEEEe
Q 013282 324 SAWHPNGVTFATGNQD----------------------KTCRIWDLRNL-SESVAVLKGNLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 324 ~~~~p~~~~l~sgs~d----------------------~~v~iwd~~~~-~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~ 380 (446)
.+...++++++.|+.+ ..+.+||+.+. ...+..+........+ ...++++++.|+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~--~~~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVS--LPWNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEE--EEETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCccccee--EEeCCEEEEEee
Confidence 1222367788888742 25778998541 1222222222222222 234677778887
Q ss_pred CCC------eEEEEEcCCCeeEeE
Q 013282 381 PAD------FVHVYDVKSGYEKEQ 398 (446)
Q Consensus 381 ~dg------~i~iwd~~~~~~~~~ 398 (446)
.++ .|.++++++++....
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eCCCCCEeeeEEEEEEcCcEeEee
Confidence 543 366668877765443
No 341
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.18 E-value=0.62 Score=50.76 Aligned_cols=189 Identities=12% Similarity=0.054 Sum_probs=109.8
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ceeeEeee-C-
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQLSKHFR-F- 275 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~~~~~~~-~- 275 (446)
.+.||.-. ..++.||++.+......... .-..+-|.|-.... +-++ .+..|+.|++.. ..+++.|. |
T Consensus 77 ~~iiALra-g~~lQiFnl~~k~klks~~~------~e~VvfWkWis~~~-l~lV--T~~aVyHW~~~~~s~P~k~fdR~~ 146 (1630)
T 1xi4_A 77 SKVIALKA-GKTLQIFNIEMKSKMKAHTM------TDDVTFWKWISLNT-VALV--TDNAVYHWSMEGESQPVKMFDRHS 146 (1630)
T ss_pred cceEEEec-CCeEEEeehHHhhhhccccc------CCCceEEEecCCCe-eEEE--cCCeEEEeccCCCCccHHHHhcch
Confidence 34444333 67899999987654322211 11234444444443 2222 346899999964 34444444 2
Q ss_pred ---CCCeeEEEECCCCCEEEEEe-------cCCcEEEEECCCCceEEEecCCCCceeEEEEC--C-CCCEEEEEeC---C
Q 013282 276 ---PWPVNHSSQSPDGKLLIIVG-------DNPDGLLVDSMTGKTIASLCGHLDFSFASAWH--P-NGVTFATGNQ---D 339 (446)
Q Consensus 276 ---~~~v~~~~~sp~~~~l~~~~-------~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--p-~~~~l~sgs~---d 339 (446)
...|..-..+++.++++..| -.|.+.+|....+ ..+.+.||.+.-..+... + ...+++.+.. .
T Consensus 147 ~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g 225 (1630)
T 1xi4_A 147 SLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAG 225 (1630)
T ss_pred hcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCCCCCceEEEEEEecCCC
Confidence 45677777889999887654 2477888886543 344566665544333332 1 1223333332 3
Q ss_pred CcEEEEEccCC--Cc------ceEEEecC---CCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeE
Q 013282 340 KTCRIWDLRNL--SE------SVAVLKGN---LGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQ 398 (446)
Q Consensus 340 ~~v~iwd~~~~--~~------~~~~~~~~---~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~ 398 (446)
+.++|-++... +. .+..+... ..-..++..++....+..-+.-|.|++||+.||.++..
T Consensus 226 ~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 226 GKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred ceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhh
Confidence 68999998542 11 11111111 11233677788777888889999999999999976654
No 342
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.99 E-value=2.3 Score=46.07 Aligned_cols=226 Identities=10% Similarity=0.043 Sum_probs=123.2
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCC---CeEEEEEeC-CCcEEEEecCc
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSG---AVHFTASNN-DCGVRDFDMGK 266 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~---~~~l~s~s~-dg~v~iwd~~~ 266 (446)
.|.+.+.++..++.+. .+.+.++.++.+.... .....-...|.++++...+.+ ..+++.|.+ |++|+|+++.+
T Consensus 515 ~I~~As~n~~~vvva~-g~~l~~fel~~~~L~~--~~~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~ 591 (1158)
T 3ei3_A 515 NISVASCNSSQVVVAV-GRALYYLQIHPQELRQ--ISHTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPS 591 (1158)
T ss_dssp CCCEEEECSSEEEEEE-TTEEEEEEEETTEEEE--EEEEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTT
T ss_pred EEEEEEeCCCEEEEEE-CCEEEEEEeeCCceee--ecccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCC
Confidence 4666677666777774 6788888887543221 112233456888887222221 247888886 99999999998
Q ss_pred ceeeEeeeC--CCCeeEEEECC--CCCEEEEEecCCcEEEEE--CCCCceEEE---ecCCCCceeEEEECCCCCEEEEEe
Q 013282 267 YQLSKHFRF--PWPVNHSSQSP--DGKLLIIVGDNPDGLLVD--SMTGKTIAS---LCGHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 267 ~~~~~~~~~--~~~v~~~~~sp--~~~~l~~~~~d~~i~i~d--~~~~~~~~~---~~~~~~~v~~~~~~p~~~~l~sgs 337 (446)
.+.+..... .....++.+.. ...+|.+|-.||.+.-+. ..+|+.... +-| ..++.=..+...|..-+.+.
T Consensus 592 l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~ 670 (1158)
T 3ei3_A 592 FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFAC 670 (1158)
T ss_dssp CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEE
T ss_pred CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEE
Confidence 776665543 22444544432 335778888999885554 445654322 223 23443333333333333333
Q ss_pred CCCcEEEEEccCCCcceEEEecCCCce-EEEEEccCC--CEEEEEeCCCeEEEEEcCCCe-eEeEeeccccCeEEEEEcC
Q 013282 338 QDKTCRIWDLRNLSESVAVLKGNLGAI-RSIRYTSDG--RYMATAEPADFVHVYDVKSGY-EKEQEIDFFGEISGISFSP 413 (446)
Q Consensus 338 ~d~~v~iwd~~~~~~~~~~~~~~~~~v-~~l~~s~dg--~~l~~~~~dg~i~iwd~~~~~-~~~~~~~~~~~v~~~~~sp 413 (446)
.+....++--+ ++. ....-....+ ....|+... .-++..+ ++.++|.-+.... ...+.......+..++++|
T Consensus 671 s~rp~liy~~~--~~l-~~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~ 746 (1158)
T 3ei3_A 671 SDRPTVIYSSN--HKL-VFSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQE 746 (1158)
T ss_dssp SSSCEEEEESS--SSE-EEEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEG
T ss_pred CCCCEEEEEcC--Cce-EEeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEeCCCCceEEEEcC
Confidence 34444454432 221 1111112223 233454321 2344444 4458888875432 2222333556789999999
Q ss_pred CCCcEEEEEec
Q 013282 414 DTESLFIGVWD 424 (446)
Q Consensus 414 dg~~l~~~~~D 424 (446)
..+.++++..+
T Consensus 747 ~~~~~~v~~~~ 757 (1158)
T 3ei3_A 747 VSQCFGVLSSR 757 (1158)
T ss_dssp GGTEEEEEEEE
T ss_pred CCCEEEEEEEe
Confidence 98887776544
No 343
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.75 E-value=0.65 Score=44.70 Aligned_cols=100 Identities=11% Similarity=-0.003 Sum_probs=56.0
Q ss_pred eeeEEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee---------CCCCeeEEEECCC---CCEEEEEec------
Q 013282 235 TNAVEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR---------FPWPVNHSSQSPD---GKLLIIVGD------ 296 (446)
Q Consensus 235 v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~---------~~~~v~~~~~sp~---~~~l~~~~~------ 296 (446)
...+.+ .|+|. ++++-...+.|++++..+++...... ....+..|+|+|+ +..|.++..
T Consensus 29 P~~~a~--~pdG~-l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 29 PHALLW--GPDNQ-IWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp EEEEEE--CTTSC-EEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred ceEEEE--cCCCc-EEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 345555 89997 45554333468888865554332221 1234668999995 555544432
Q ss_pred -------CCcEEEEECCCC--c-----eEE-EecC-CCCceeEEEECCCCCEEEEEe
Q 013282 297 -------NPDGLLVDSMTG--K-----TIA-SLCG-HLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 297 -------d~~i~i~d~~~~--~-----~~~-~~~~-~~~~v~~~~~~p~~~~l~sgs 337 (446)
...|.-++...+ + .+. .+.. .......|+|.|+|.+.++.+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 234555554322 1 111 1221 123468899999998777654
No 344
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.93 E-value=0.43 Score=51.90 Aligned_cols=190 Identities=16% Similarity=0.090 Sum_probs=106.5
Q ss_pred ccCeEEEecCCeEEEEecCCC-CceEEEecCCCCCCCCCCCCCccccCccceEEEEEe--CCcEEEEec-------cCCc
Q 013282 141 SKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAV--KDKLLVAGG-------FQGE 210 (446)
Q Consensus 141 ~~~~v~~~~~~~i~~w~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~--~~~~l~tg~-------~dg~ 210 (446)
+...+-...+..|.||+.... .+..++.-.+. +.+.+|..... +.++++..| -.|.
T Consensus 115 s~~~l~lVT~~aVyHW~~~~~s~P~k~fdR~~~--------------L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~ 180 (1630)
T 1xi4_A 115 SLNTVALVTDNAVYHWSMEGESQPVKMFDRHSS--------------LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (1630)
T ss_pred CCCeeEEEcCCeEEEeccCCCCccHHHHhcchh--------------cccCeeEEeeeCCCCCeEEEEeeccCCCcccce
Confidence 455555666788999987432 12222222211 12346777766 667766443 3588
Q ss_pred EEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeC---CCcEEEEecCcc---e-e-----eEeeeC---
Q 013282 211 LICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNN---DCGVRDFDMGKY---Q-L-----SKHFRF--- 275 (446)
Q Consensus 211 i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~---dg~v~iwd~~~~---~-~-----~~~~~~--- 275 (446)
+.+|..+.... +...+|.+.-..+.+--.+....+|+.+.. .+.+.|.++... . . +..+-.
T Consensus 181 mQLyS~er~~s----Q~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~ 256 (1630)
T 1xi4_A 181 MQLYSVDRKVS----QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEA 256 (1630)
T ss_pred eeeeecccccc----hhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCccc
Confidence 88998866532 233344333222222111222223332222 368888887442 1 1 001111
Q ss_pred -CCCeeEEEECCCCCEEEEEecCCcEEEEECCCCceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEcc
Q 013282 276 -PWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMTGKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLR 348 (446)
Q Consensus 276 -~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~ 348 (446)
..-..++.+++.-..+...+.-|.|+++|+.||.++..-+-...+|+..+-++...=++..+..|.|.-..+.
T Consensus 257 ~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~~~~~~g~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 257 QNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVE 330 (1630)
T ss_pred ccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEeccCCCCCceEEEcCCceEEEEEEc
Confidence 1123467778877788888999999999999999887665556677766655544445555567766655553
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.47 E-value=4.9 Score=40.96 Aligned_cols=152 Identities=8% Similarity=0.028 Sum_probs=81.2
Q ss_pred EEEEe--CCcEEEEeccCC------cEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC--cEEEE
Q 013282 193 STLAV--KDKLLVAGGFQG------ELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC--GVRDF 262 (446)
Q Consensus 193 ~~l~~--~~~~l~tg~~dg------~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg--~v~iw 262 (446)
.+... ++.+++.||.++ .+.+||+.+..... ...-........... -.++. +++.|+.++ .+.+|
T Consensus 444 s~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~---~~~~p~~R~~h~~~~-~~~~~-iyv~GG~~~~~~v~~y 518 (695)
T 2zwa_A 444 TFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM---IKSLSHTRFRHSACS-LPDGN-VLILGGVTEGPAMLLY 518 (695)
T ss_dssp EEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEE---CCCCSBCCBSCEEEE-CTTSC-EEEECCBCSSCSEEEE
T ss_pred EEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEE---CCCCCCCcccceEEE-EcCCE-EEEECCCCCCCCEEEE
Confidence 34455 888889998654 46778877654321 111111111111111 23555 677776544 69999
Q ss_pred ecCcceeeEeee-----CCC-CeeEEEECCC-CCEEEEEecC-------CcEEEEECCCCce-----EEEecC---CCCc
Q 013282 263 DMGKYQLSKHFR-----FPW-PVNHSSQSPD-GKLLIIVGDN-------PDGLLVDSMTGKT-----IASLCG---HLDF 320 (446)
Q Consensus 263 d~~~~~~~~~~~-----~~~-~v~~~~~sp~-~~~l~~~~~d-------~~i~i~d~~~~~~-----~~~~~~---~~~~ 320 (446)
|+.+.+-...-. .+. ...++.+..+ +++++.||.+ ..+.+||+.+.+- -..+.. ....
T Consensus 519 d~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~ 598 (695)
T 2zwa_A 519 NVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRY 598 (695)
T ss_dssp ETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCB
T ss_pred ECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcc
Confidence 998766433221 111 1223555554 6677777652 4588999987761 112211 1111
Q ss_pred eeEEEECCCCCEEEEEeCC--------CcEEEEEccC
Q 013282 321 SFASAWHPNGVTFATGNQD--------KTCRIWDLRN 349 (446)
Q Consensus 321 v~~~~~~p~~~~l~sgs~d--------~~v~iwd~~~ 349 (446)
-.+++...++++++.|+.+ ..+.+||+.+
T Consensus 599 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t 635 (695)
T 2zwa_A 599 GSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLS 635 (695)
T ss_dssp SCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTT
T ss_pred cceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCC
Confidence 1223333337888888743 4589999854
No 346
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.11 E-value=0.24 Score=45.56 Aligned_cols=110 Identities=10% Similarity=0.030 Sum_probs=72.4
Q ss_pred EEEEEeCCCcEEEEecCcceeeEeeeCC--CCeeEEEE--CCCCCEEEEE--ecCCcEEEEECCCCceEEEecC----CC
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSKHFRFP--WPVNHSSQ--SPDGKLLIIV--GDNPDGLLVDSMTGKTIASLCG----HL 318 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~--~~v~~~~~--sp~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~----~~ 318 (446)
+++.++.||.|..+|..+|+.+..+... .++....- .+.+..++++ +.||.|+.++..+|.....+.. ..
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~~ 91 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVST 91 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHTT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccceec
Confidence 6888899999999999999999998844 33332211 1122244444 5899999999988855444331 11
Q ss_pred CceeE---EEE-C----CCCCEEEEEeCCCcEEEEEccCCCcceEEEec
Q 013282 319 DFSFA---SAW-H----PNGVTFATGNQDKTCRIWDLRNLSESVAVLKG 359 (446)
Q Consensus 319 ~~v~~---~~~-~----p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~ 359 (446)
.++.. ... . ..+..+++|+.+|++...|+++ ++.+..+..
T Consensus 92 SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~t-G~~~W~~~~ 139 (339)
T 2be1_A 92 SPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLN-GEIISAFGP 139 (339)
T ss_dssp CSEEEECC----------CCEEEEECEEEEEEEEEETTT-CCEEEEEST
T ss_pred cccccCCCceeecccccccCCEEEEEecCCEEEEEECCC-CcEEEEEec
Confidence 22221 000 0 0356789999999999999976 787777754
No 347
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=93.23 E-value=0.75 Score=44.89 Aligned_cols=121 Identities=17% Similarity=0.240 Sum_probs=77.1
Q ss_pred cEEEEecCc----c-eeeEeeeCCCCeeEEEECCCCCEEEEEe-cCCcEEEEECCC------Cce-------EEEecCCC
Q 013282 258 GVRDFDMGK----Y-QLSKHFRFPWPVNHSSQSPDGKLLIIVG-DNPDGLLVDSMT------GKT-------IASLCGHL 318 (446)
Q Consensus 258 ~v~iwd~~~----~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~------~~~-------~~~~~~~~ 318 (446)
.|.+.|.+. + ..+..+.-+.....+.++|||+++++++ .+.++.++|.+. ++. +...+.-.
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 355666544 2 2233334455567788999999998776 488999999873 221 22333233
Q ss_pred CceeEEEECCCCCEEEEEeCCCcEEEEEccCC---------CcceEEEecCCCceEEEEE------ccCCCEEEEEe
Q 013282 319 DFSFASAWHPNGVTFATGNQDKTCRIWDLRNL---------SESVAVLKGNLGAIRSIRY------TSDGRYMATAE 380 (446)
Q Consensus 319 ~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~---------~~~~~~~~~~~~~v~~l~~------s~dg~~l~~~~ 380 (446)
+ ....+|.++|+...|---|..|.-|++... ...+..+..|-.+ -.+.- .|+|++|++..
T Consensus 379 G-PlHt~Fd~~G~aYTtlfidSqvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp-GH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 379 G-PLHTTFDGRGNAYTTLFIDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP-GHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp C-EEEEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE-EEEEETTTTSTTCCSCEEEEEE
T ss_pred c-ccEEEECCCCceEeeeeecceEEEEeccHHHHHhcCccCCeeeeccccccCC-cccccCCCccCCCCccEEEEec
Confidence 3 467899999965556667999999999542 1345555555432 23322 67899998875
No 348
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.84 E-value=7.7 Score=35.67 Aligned_cols=62 Identities=10% Similarity=0.098 Sum_probs=39.6
Q ss_pred CceeEEEEC-------CCCCEEEEEeCCCcEEEEEccCCCcce--EEEe-cCCCceEEEEEccCCCEEEEEe
Q 013282 319 DFSFASAWH-------PNGVTFATGNQDKTCRIWDLRNLSESV--AVLK-GNLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 319 ~~v~~~~~~-------p~~~~l~sgs~d~~v~iwd~~~~~~~~--~~~~-~~~~~v~~l~~s~dg~~l~~~~ 380 (446)
.....++|. .+|.++++.-..+.|...++...+... ..+. +....+..+++.|||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 345678883 467777766667788888885422222 2232 2245788999999997665543
No 349
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=90.55 E-value=6.6 Score=37.69 Aligned_cols=107 Identities=14% Similarity=0.104 Sum_probs=59.9
Q ss_pred CceeEEEECCCCC-EEEEEeCCCcEEEEEccCC--CcceEEEe---------cCCCceEEEEEccC----CCEEEEEeC-
Q 013282 319 DFSFASAWHPNGV-TFATGNQDKTCRIWDLRNL--SESVAVLK---------GNLGAIRSIRYTSD----GRYMATAEP- 381 (446)
Q Consensus 319 ~~v~~~~~~p~~~-~l~sgs~d~~v~iwd~~~~--~~~~~~~~---------~~~~~v~~l~~s~d----g~~l~~~~~- 381 (446)
.....|+|.|+|. .|+++.+.|.|++++.... ...+..+. ...+....|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3457899999986 4555668899999975321 11222221 11346788999996 433333221
Q ss_pred -C----------CeEEEEEcCC----------CeeEeEee--ccccCeEEEEEcCCCCcEEEEEecCC
Q 013282 382 -A----------DFVHVYDVKS----------GYEKEQEI--DFFGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 382 -d----------g~i~iwd~~~----------~~~~~~~~--~~~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+ ..|.-|.+.. .+.+..+. ........|+|.|||. |+++..|+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCC
Confidence 1 1344465542 12333332 1112357899999995 566655543
No 350
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.82 E-value=13 Score=34.64 Aligned_cols=162 Identities=10% Similarity=0.105 Sum_probs=96.7
Q ss_pred cEEEEecCcc--eeeEeeeCC-------CCeeEEEEC---CC----CCEEEEEe-cCCcEEEEECCCCceEEEec-----
Q 013282 258 GVRDFDMGKY--QLSKHFRFP-------WPVNHSSQS---PD----GKLLIIVG-DNPDGLLVDSMTGKTIASLC----- 315 (446)
Q Consensus 258 ~v~iwd~~~~--~~~~~~~~~-------~~v~~~~~s---p~----~~~l~~~~-~d~~i~i~d~~~~~~~~~~~----- 315 (446)
.|.+||+.+. +.++.+..+ ..++.+++. |. +.++..+. ..+.|.++|+.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 4667888888 887777632 236777776 32 23333332 46789999999887665542
Q ss_pred ---------CC----CCceeEEEECCC----CCEEEEEeCCCcEEEEEc-----cCC--CcceEEEecCC---CceEEEE
Q 013282 316 ---------GH----LDFSFASAWHPN----GVTFATGNQDKTCRIWDL-----RNL--SESVAVLKGNL---GAIRSIR 368 (446)
Q Consensus 316 ---------~~----~~~v~~~~~~p~----~~~l~sgs~d~~v~iwd~-----~~~--~~~~~~~~~~~---~~v~~l~ 368 (446)
|. ...+..++++|+ ++.|......+ -++|-+ ++. ...++.+ +.. ..-..++
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~-G~kg~~s~~~~~~ 281 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELL-GNRGKYNDAIALA 281 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEE-EECCTTCCEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEe-eecCCCCCcceEE
Confidence 10 247888999997 78888776654 234443 221 1222322 222 2333566
Q ss_pred Ec-cCCCEEEEEeCCCeEEEEEcCC-Ce---eEeEee-c-cccCeEEEEEcCCCCcEEEE
Q 013282 369 YT-SDGRYMATAEPADFVHVYDVKS-GY---EKEQEI-D-FFGEISGISFSPDTESLFIG 421 (446)
Q Consensus 369 ~s-~dg~~l~~~~~dg~i~iwd~~~-~~---~~~~~~-~-~~~~v~~~~~spdg~~l~~~ 421 (446)
+. .+|.++++--..+.|..|+..+ .. ....+. . .-..+.++.+.++|.+.+.+
T Consensus 282 ~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~s 341 (381)
T 3q6k_A 282 YDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMS 341 (381)
T ss_dssp ECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEE
T ss_pred EeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEE
Confidence 75 6787777777788899999876 22 111221 1 22357888888887644444
No 351
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=88.25 E-value=16 Score=33.85 Aligned_cols=216 Identities=9% Similarity=-0.046 Sum_probs=101.9
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCC----cEEEEec--CcceeeEe
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDC----GVRDFDM--GKYQLSKH 272 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg----~v~iwd~--~~~~~~~~ 272 (446)
...|.+|+..| +.+++....+..............+.+|.+ .|.....+.++...| .|...+- .+.+.+..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~--dp~~~~~l~~g~~~g~~g~gl~~s~D~G~tW~~~~~ 98 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQ--DPREPERMLMAARTGHLGPTVFRSDDGGGNWTEATR 98 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEE--CSSSTTCEEEEEEC--CCEEEEEESSTTSCCEECSB
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEE--CCCCCCeEEEEecCCCCCccEEEeCCCCCCceECCc
Confidence 45777888777 555554332211211111223445777776 772222355554444 4443321 12222211
Q ss_pred ---ee-C--------CCCeeEEEECC-C-CCEEEEEecCCcEEEEECCCCceEEEecC-------------------CCC
Q 013282 273 ---FR-F--------PWPVNHSSQSP-D-GKLLIIVGDNPDGLLVDSMTGKTIASLCG-------------------HLD 319 (446)
Q Consensus 273 ---~~-~--------~~~v~~~~~sp-~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-------------------~~~ 319 (446)
+. . ...|.++++.| + ...+.+++..+.|+..+ ..|+.-..+.. ...
T Consensus 99 ~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~ 177 (394)
T 3b7f_A 99 PPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGP 177 (394)
T ss_dssp CCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC----CCCC
T ss_pred cccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccCCCCCC
Confidence 11 0 01467788887 2 55666666666555443 22332222211 123
Q ss_pred ceeEEEECC-CCCEEEEEeCCCcEEEEEccCCCcceEEEecC-------------CCceEEEEEccC-CCEEEEEeCCCe
Q 013282 320 FSFASAWHP-NGVTFATGNQDKTCRIWDLRNLSESVAVLKGN-------------LGAIRSIRYTSD-GRYMATAEPADF 384 (446)
Q Consensus 320 ~v~~~~~~p-~~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~-------------~~~v~~l~~s~d-g~~l~~~~~dg~ 384 (446)
.+.+|.++| +...|+.+...+.|.. ....++....+... ...+.+|.+.|. ...|..+...+
T Consensus 178 ~i~~i~~d~~~~~~l~vg~~~ggl~~--s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g- 254 (394)
T 3b7f_A 178 KMHSILVDPRDPKHLYIGMSSGGVFE--STDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG- 254 (394)
T ss_dssp EEEEEEECTTCTTCEEEEEETBEEEE--ESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-
T ss_pred ceeEEEECCCCCCEEEEEECCCCEEE--ECCCCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-
Confidence 578899998 3444555544443333 22323333332210 124889999986 35666666555
Q ss_pred EEEEEcCCCeeEeEeec-cc----cCeEEEEEcC-CCCcEEEEE
Q 013282 385 VHVYDVKSGYEKEQEID-FF----GEISGISFSP-DTESLFIGV 422 (446)
Q Consensus 385 i~iwd~~~~~~~~~~~~-~~----~~v~~~~~sp-dg~~l~~~~ 422 (446)
|...+- .+.....+.. .. ..+..++++| +...|+++.
T Consensus 255 l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 255 IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 554442 2332222211 11 2356788887 345566654
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=84.66 E-value=29 Score=33.22 Aligned_cols=142 Identities=18% Similarity=0.126 Sum_probs=71.8
Q ss_pred CeeEEEECCCCCEEEEEecCC-----------------cEEEEECCCC------c---------------eEEEecCCCC
Q 013282 278 PVNHSSQSPDGKLLIIVGDNP-----------------DGLLVDSMTG------K---------------TIASLCGHLD 319 (446)
Q Consensus 278 ~v~~~~~sp~~~~l~~~~~d~-----------------~i~i~d~~~~------~---------------~~~~~~~~~~ 319 (446)
.-..|+|.|||.+.++.++.+ .|.-.+.... . .+. -.+|..
T Consensus 140 ~g~~l~fgpDG~LYv~~Gd~~~~~~~~~~~q~~~~~~GkIlRi~~dg~~~~~~y~iP~dNPf~~~~~~~~eI~-a~G~RN 218 (463)
T 2wg3_C 140 LGGQLLFGPDGFLYIILGDGMITLDDMEEMDGLSDFTGSVLRLDVDTDMCNVPYSIPRSNPHFNSTNQPPEVF-AHGLHD 218 (463)
T ss_dssp CEEEEEECTTSCEEEEECCTTCCHHHHHHCTTCCSCTTEEEEEBCCCCCSSCSCBCCTTSTTTTCSSSCTTEE-EECCSS
T ss_pred cCCcEeECCCCcEEEEeCCCCCCCCccccccCcCCCCeeEEEEECCCCcccccCcCCCCCCCcCCCCCcccEE-EECCCC
Confidence 367899999999888776543 2333333321 0 011 123444
Q ss_pred ceeEEEECCC-----CCE-EEEEeCCC----cEEEEEccCCC-----cceEEEecCC-CceEEEEEccC-------CCEE
Q 013282 320 FSFASAWHPN-----GVT-FATGNQDK----TCRIWDLRNLS-----ESVAVLKGNL-GAIRSIRYTSD-------GRYM 376 (446)
Q Consensus 320 ~v~~~~~~p~-----~~~-l~sgs~d~----~v~iwd~~~~~-----~~~~~~~~~~-~~v~~l~~s~d-------g~~l 376 (446)
+ ..++|+|. |.+ +..+-..| .-.|..+.... .++..+..|. .++..+.|-.. |.+|
T Consensus 219 p-~gla~dp~tg~~~G~l~~~~~D~~G~~~~~~ei~~i~~G~~yG~~~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f 297 (463)
T 2wg3_C 219 P-GRCAVDRHPTDININLTILCSDSNGKNRSSARILQIIKGKDYESEPSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYV 297 (463)
T ss_dssp C-CBEEEESSCSSTTCSEEEEEECC------CEEEEEEC----CCSCCCCEECCC----CEEEEEECCCSSCTTTTTCEE
T ss_pred c-ceEEECCCCCCcccceEEEecccCCCCCCCCeEeeeccCCCCCCCCCeEEeeCCCCccccceEEEeCCCChhhcceEE
Confidence 3 56899996 443 43332112 23344442211 3555554332 46778877432 3344
Q ss_pred EEEeCCCeEEEEEcCCCe---eEeEe-e--------ccccCeEEEEEcCCCCcEEEEE
Q 013282 377 ATAEPADFVHVYDVKSGY---EKEQE-I--------DFFGEISGISFSPDTESLFIGV 422 (446)
Q Consensus 377 ~~~~~dg~i~iwd~~~~~---~~~~~-~--------~~~~~v~~~~~spdg~~l~~~~ 422 (446)
.+...+.|....+.... ....+ . ...+.+.++.+.|||.++++..
T Consensus 298 -~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~pdG~Lyv~~~ 354 (463)
T 2wg3_C 298 -FGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGEDELGEVYILSS 354 (463)
T ss_dssp -EEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEECTTCCEEEEEE
T ss_pred -EecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEECCCCCEEEEec
Confidence 45555766666654331 11111 1 1235799999999998766554
No 353
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=83.88 E-value=22 Score=31.32 Aligned_cols=180 Identities=9% Similarity=-0.035 Sum_probs=91.6
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ce
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQ 268 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~ 268 (446)
.|..++. ....++. . +|.|..|-....+..- ........|..+.. . ....++. . ||.|+.|-... ++
T Consensus 25 ~i~~ia~G~~h~~~l-~-~G~v~~wG~n~~Gqlg---~p~~~~~~i~~ia~--G--~~hs~~l-~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL-K-GGKVLGWGANLNGQLT---MPAATQSGVDAIAA--G--NYHSLAL-K-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECSSEEEEE-E-TTEEEEEECCSSSTTS---CCGGGGSCCCEEEE--C--SSEEEEE-E-TTEEEEEECCTTST
T ss_pred CCcEEEeCCCeEEEE-E-CCEEEEEeCCCCCCCC---CCccCCCCEEEEEe--C--CCEEEEE-E-CCEEEEeeCCCCCC
Confidence 4777777 3344444 5 9999999876544221 00011123444433 2 2223333 4 89999997643 22
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-CceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
+-.-......|..++... .+.++-. +|.|+.|-... +++-.. ......|..++..... .++ -. ||.|..|-.
T Consensus 94 lg~P~~~~~~v~~ia~G~--~hs~al~-~G~v~~wG~n~~gqlg~~-~~~~~~i~~i~~G~~~-~~~-l~-~G~v~~wG~ 166 (282)
T 3qhy_B 94 TTVPAEARSGVDAIAAGA--WASYALK-DGKVIAWGDDSDGQTTVP-AEAQSGVTALDGGVYT-ALA-VK-NGGVIAWGD 166 (282)
T ss_dssp TCCCGGGSSSEEEEEEET--TEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSSE-EEE-EE-TTEEEEEEC
T ss_pred CCCCcccCCCeEEEECcC--CEEEEEe-CCeEEEecCCCCCcCCCC-ccCCCCeEEEEcccCE-EEE-EE-CCEEEEecC
Confidence 111111234566666543 3444455 89999997653 332111 1123456666654332 222 33 788998877
Q ss_pred cCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCC
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKS 392 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~ 392 (446)
...++.-.. ......|..|+...... ++. .+|.|+.|-...
T Consensus 167 n~~gqlg~p-~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~ 207 (282)
T 3qhy_B 167 NYFGQTTVP-AEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNR 207 (282)
T ss_dssp CTTSTTSCC-GGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCT
T ss_pred CCCCCCCCc-eecCCCeEEEEecCCEE-EEE--ECCeEEEEECCC
Confidence 443322111 11124577776654432 333 488999996543
No 354
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=82.82 E-value=24 Score=31.03 Aligned_cols=198 Identities=14% Similarity=0.039 Sum_probs=100.3
Q ss_pred eEEEEEe-CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ce
Q 013282 191 QVSTLAV-KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQ 268 (446)
Q Consensus 191 ~v~~l~~-~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~ 268 (446)
.|..++. ....++. . +|.|..|-....+..-. ...-...|..+.. . .. +.++-. +|.|+.|-... ++
T Consensus 64 ~i~~ia~G~~hs~~l-~-~G~v~~wG~n~~Gqlg~---P~~~~~~v~~ia~--G--~~-hs~al~-~G~v~~wG~n~~gq 132 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL-K-DGEVIAWGGNEDGQTTV---PAEARSGVDAIAA--G--AW-ASYALK-DGKVIAWGDDSDGQ 132 (282)
T ss_dssp CCCEEEECSSEEEEE-E-TTEEEEEECCTTSTTCC---CGGGSSSEEEEEE--E--TT-EEEEEE-TTEEEEEECCTTST
T ss_pred CEEEEEeCCCEEEEE-E-CCEEEEeeCCCCCCCCC---CcccCCCeEEEEC--c--CC-EEEEEe-CCeEEEecCCCCCc
Confidence 5777777 4444555 4 99999998765442210 0011123444443 1 12 344444 89999997643 22
Q ss_pred eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-CceEEEecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 269 LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKTIASLCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 269 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
+-........|..++... ...++-. +|.|+.|-... +++-.. ..-...|..++-... ..++. .+|.|..|=.
T Consensus 133 lg~~~~~~~~i~~i~~G~--~~~~~l~-~G~v~~wG~n~~gqlg~p-~~~~~~v~~i~~G~~-hs~al--~~G~v~~wG~ 205 (282)
T 3qhy_B 133 TTVPAEAQSGVTALDGGV--YTALAVK-NGGVIAWGDNYFGQTTVP-AEAQSGVDDVAGGIF-HSLAL--KDGKVIAWGD 205 (282)
T ss_dssp TSCCGGGGSSEEEEEECS--SEEEEEE-TTEEEEEECCTTSTTSCC-GGGGSSEEEEEECSS-EEEEE--ETTEEEEEEC
T ss_pred CCCCccCCCCeEEEEccc--CEEEEEE-CCEEEEecCCCCCCCCCc-eecCCCeEEEEecCC-EEEEE--ECCeEEEEEC
Confidence 211111234566666543 2333334 78899997653 222111 111245666665433 23344 5899999976
Q ss_pred cCCCcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEEEcCC
Q 013282 348 RNLSESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGISFSPD 414 (446)
Q Consensus 348 ~~~~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~spd 414 (446)
...++.-... .....|..|+...... ++. . +|.|+.|-.....++. ....|..|+-...
T Consensus 206 n~~gqlg~p~-~~~~~v~~i~~G~~h~-~al-~-~g~v~~wG~n~~gq~~----v~~~v~~iaaG~~ 264 (282)
T 3qhy_B 206 NRYKQTTVPT-EALSGVSAIASGEWYS-LAL-K-NGKVIAWGSSRTAPSS----VQSGVSSIEAGPN 264 (282)
T ss_dssp CTTSTTCCCG-GGGSSCCEEEECSSCE-EEE-E-TTEEEEESTTCCCCGG----GSSCEEEEEECSS
T ss_pred CCCCCCCCCc-ccCCCceEEEcCCCEE-EEE-E-CCEEEEecCCCCcccc----CCCCcEEEEECcC
Confidence 4433321111 1123566776654433 333 3 9999999654432221 1235666665543
No 355
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.24 E-value=34 Score=36.17 Aligned_cols=36 Identities=8% Similarity=0.061 Sum_probs=27.9
Q ss_pred EEEEeCCCCCeEEEEEeCCCcEEEEecCcceeeEeee
Q 013282 238 VEIYGSPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (446)
Q Consensus 238 i~~~~s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (446)
+++...++.. ++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 239 ISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp EEEEEETTTT-EEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred EEEeecCCCc-EEEEEECCCEEEEEECCCCCeEeeec
Confidence 3333355555 68888999999999999999988765
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.93 E-value=6.9 Score=38.43 Aligned_cols=63 Identities=24% Similarity=0.391 Sum_probs=45.0
Q ss_pred ceEEEEEccCCCEEEEEeC------------CCeEEEEEcCCCeeEeEeecc-ccCeEEEEEcCCCCcEEEEEecC
Q 013282 363 AIRSIRYTSDGRYMATAEP------------ADFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWDR 425 (446)
Q Consensus 363 ~v~~l~~s~dg~~l~~~~~------------dg~i~iwd~~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~D~ 425 (446)
....|.|.++|.+.++... ...|..++..+++...-+... ...+++++|+||++.|+++....
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQHP 552 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQHP 552 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEEST
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEeCC
Confidence 4668999999987764322 225777787777654444332 35799999999999999987543
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=81.29 E-value=5 Score=39.74 Aligned_cols=61 Identities=25% Similarity=0.403 Sum_probs=43.0
Q ss_pred eEEEEEccCCCEEEEEeCC------------CeEEEEEcCCCeeEeEeecc-ccCeEEEEEcCCCCcEEEEEec
Q 013282 364 IRSIRYTSDGRYMATAEPA------------DFVHVYDVKSGYEKEQEIDF-FGEISGISFSPDTESLFIGVWD 424 (446)
Q Consensus 364 v~~l~~s~dg~~l~~~~~d------------g~i~iwd~~~~~~~~~~~~~-~~~v~~~~~spdg~~l~~~~~D 424 (446)
.-.|+|+|.|+++++-..+ ..+.+.+..+++...-+... ..++++++|+||++.|++...-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvniQH 551 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQH 551 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEES
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEEEC
Confidence 4568999999966643322 24666677777655444443 4689999999999999988543
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=78.46 E-value=41 Score=30.96 Aligned_cols=132 Identities=10% Similarity=-0.019 Sum_probs=67.2
Q ss_pred CeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEecC--CC---CceeEEEECC-CCCEEEEEeC-----------C
Q 013282 278 PVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCG--HL---DFSFASAWHP-NGVTFATGNQ-----------D 339 (446)
Q Consensus 278 ~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--~~---~~v~~~~~~p-~~~~l~sgs~-----------d 339 (446)
.+.++.++|. ...|.+++..+ |+..+ ..++.-..+.. .. ..+.+++++| +...|..+.. +
T Consensus 233 ~~~~i~~~~~~~~~l~vg~~~g-l~~s~-D~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~ 310 (394)
T 3b7f_A 233 DPHCVVQHPAAPDILYQQNHCG-IYRMD-RREGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPG 310 (394)
T ss_dssp CEEEEEECSSSTTEEEEEETTE-EEEEE-TTTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEECBCCSSTTCCBCC
T ss_pred ceeEEEECCCCCCEEEEEcCCe-EEEeC-CCCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEeccCCccceeecCC
Confidence 4789999985 46676666544 54443 23333333321 11 3467888887 3344444432 3
Q ss_pred CcEEEEEccCCCcceEEEec-CC--C----c-eEEEEEccCC-CEEEEEeCCCeEEEEEcCCCeeEeEeeccccCeEEEE
Q 013282 340 KTCRIWDLRNLSESVAVLKG-NL--G----A-IRSIRYTSDG-RYMATAEPADFVHVYDVKSGYEKEQEIDFFGEISGIS 410 (446)
Q Consensus 340 ~~v~iwd~~~~~~~~~~~~~-~~--~----~-v~~l~~s~dg-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 410 (446)
+...||.....++....+.. -. . . ...++++|.. ..|+.++..+.|..-. ..|..-..+......+.++.
T Consensus 311 ~~~~~~~S~DgG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~ 389 (394)
T 3b7f_A 311 GKPAVYVTRDAGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQ 389 (394)
T ss_dssp SSCCEEEESSTTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTSCEEEES-STTSBCEEEECSCSCEEEEE
T ss_pred CceeEEEECCCCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEE
Confidence 34566666554444444321 11 0 1 1357888743 4466666555554332 33433334443444566666
Q ss_pred Ec
Q 013282 411 FS 412 (446)
Q Consensus 411 ~s 412 (446)
|.
T Consensus 390 ~~ 391 (394)
T 3b7f_A 390 SA 391 (394)
T ss_dssp EE
T ss_pred Ee
Confidence 54
No 359
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.82 E-value=90 Score=33.72 Aligned_cols=37 Identities=16% Similarity=0.066 Sum_probs=30.7
Q ss_pred ceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEe
Q 013282 363 AIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQE 399 (446)
Q Consensus 363 ~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~ 399 (446)
.+.+++..++..+|++-+.|+.+|||++.++.++...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3445666778899999999999999999999877654
No 360
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=72.94 E-value=59 Score=30.06 Aligned_cols=171 Identities=11% Similarity=0.070 Sum_probs=94.9
Q ss_pred cEEEEEcCCC--CeeeEEEEee---cCCCceeeEEEEe-CCC----CCeEEEEEeCCCcEEEEecCcceeeEeee-----
Q 013282 210 ELICKHLDRP--GVSFCSRTTY---DDNAITNAVEIYG-SPS----GAVHFTASNNDCGVRDFDMGKYQLSKHFR----- 274 (446)
Q Consensus 210 ~i~vw~~~~~--~~~~~~~~~~---~~~~~v~~i~~~~-s~~----~~~~l~s~s~dg~v~iwd~~~~~~~~~~~----- 274 (446)
+|.+||+.+. +......+.. ...+..+.+.+-. .|. +....++=+....|.++|+.+++.-+...
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5778888887 5543322211 1234566666641 232 23233344457789999998876544331
Q ss_pred --------------CCCCeeEEEECCC----CCEEEEEecCC-cEEEEE---CCCC---ceEEEec--CCCCceeEEEEC
Q 013282 275 --------------FPWPVNHSSQSPD----GKLLIIVGDNP-DGLLVD---SMTG---KTIASLC--GHLDFSFASAWH 327 (446)
Q Consensus 275 --------------~~~~v~~~~~sp~----~~~l~~~~~d~-~i~i~d---~~~~---~~~~~~~--~~~~~v~~~~~~ 327 (446)
....+..++++|+ ++.|....-.+ .++-.. ++.. ..+..+. +.......++..
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D 283 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYD 283 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEEC
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEe
Confidence 1235778999997 67776665443 343333 1222 1222221 112334456776
Q ss_pred -CCCCEEEEEeCCCcEEEEEccC-CC--cceEEEec--CCCceEEEEEccCCCEEEEEe
Q 013282 328 -PNGVTFATGNQDKTCRIWDLRN-LS--ESVAVLKG--NLGAIRSIRYTSDGRYMATAE 380 (446)
Q Consensus 328 -p~~~~l~sgs~d~~v~iwd~~~-~~--~~~~~~~~--~~~~v~~l~~s~dg~~l~~~~ 380 (446)
.+|.++++--....|..|+... .- .....+.. ....+..+++.++|.+.+.++
T Consensus 284 ~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 284 PKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp TTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSCEEEEEC
T ss_pred CCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccCeEEECCCCeEEEEEC
Confidence 5788788777888999999853 11 22233322 223567788777776555443
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.70 E-value=1.1e+02 Score=32.41 Aligned_cols=37 Identities=11% Similarity=0.118 Sum_probs=30.6
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEEccCCCcceEEE
Q 013282 320 FSFASAWHPNGVTFATGNQDKTCRIWDLRNLSESVAVL 357 (446)
Q Consensus 320 ~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~~~~~~ 357 (446)
.+.+++..++..++++-+.|+++|+|++.+ ++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t-~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLST-NQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTT-TEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCC-CCeEeee
Confidence 466777888888999999999999999966 6666654
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=68.39 E-value=66 Score=28.74 Aligned_cols=188 Identities=13% Similarity=0.080 Sum_probs=105.4
Q ss_pred CCcEEEEeccCCcEEEEEcCCCCee------eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-----
Q 013282 198 KDKLLVAGGFQGELICKHLDRPGVS------FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK----- 266 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~~~------~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~----- 266 (446)
+..++++.+.+|.|+--.+..-... .....+......+..+.. +.. . .++..++.|.++-+....
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~--~~~-~-~ll~~T~~G~~~~~~~~~ip~~~ 82 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCV--NTH-D-YLFMISNEGKLYLINAYEIKDSS 82 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEE--ETT-C-EEEEEETTSEEEEEEGGGSCC--
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEE--CCC-C-EEEEEECCCeEEEEEHHHCCCCC
Confidence 5667889999999987766433111 000111222223332222 222 3 456666888877765432
Q ss_pred ----cee---eEeeeCCCCeeEEEECC---CCCEEEEEecCCcEEEEECC-------CCceEEEecCCCCceeEEEECCC
Q 013282 267 ----YQL---SKHFRFPWPVNHSSQSP---DGKLLIIVGDNPDGLLVDSM-------TGKTIASLCGHLDFSFASAWHPN 329 (446)
Q Consensus 267 ----~~~---~~~~~~~~~v~~~~~sp---~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~~p~ 329 (446)
|.+ ...+.....|..+...+ +...++..+..|.++...+. .|.....+.. .+.+..+.....
T Consensus 83 r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~ 161 (312)
T 1suu_A 83 RASKGQNISELINLGDQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFK 161 (312)
T ss_dssp -----CBGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECT
T ss_pred ccCCCcChhhccCCCCCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCC
Confidence 111 11122334455554332 46678888999999888763 2322333443 455666555555
Q ss_pred CCEEEEEeCCCcEEEEEccCC---Cc---ceE--EEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 330 GVTFATGNQDKTCRIWDLRNL---SE---SVA--VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 330 ~~~l~sgs~d~~v~iwd~~~~---~~---~~~--~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
...++..+..|.+..+....- ++ =+. .+.. ...|.++..-+++..|++.+..|..+...+.
T Consensus 162 ~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 162 DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 567888899999988887431 11 111 1222 3345566555556678888999999998874
No 363
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=64.10 E-value=80 Score=28.17 Aligned_cols=176 Identities=7% Similarity=0.008 Sum_probs=98.9
Q ss_pred EEEEEeCCCcEEEEecCcceeeE---------eeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECC---C------Cce
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSK---------HFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM---T------GKT 310 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~---~------~~~ 310 (446)
.++..+.+|.|+-..+...+... .+.....+..+........++..+..|.++-+... . |.+
T Consensus 10 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~G~~ 89 (312)
T 1suu_A 10 IVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASKGQN 89 (312)
T ss_dssp EEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-------CB
T ss_pred EEEEEeCCCEEEEeEHHHhhccccCCCCceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCCCcC
Confidence 57778899999988765443221 12233445555544455677777888887666542 1 111
Q ss_pred ---EEEecCCCCceeEEEECC---CCCEEEEEeCCCcEEEEEccCCC------cceEEEecCCCceEEEEEccCCCEEEE
Q 013282 311 ---IASLCGHLDFSFASAWHP---NGVTFATGNQDKTCRIWDLRNLS------ESVAVLKGNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 311 ---~~~~~~~~~~v~~~~~~p---~~~~l~sgs~d~~v~iwd~~~~~------~~~~~~~~~~~~v~~l~~s~dg~~l~~ 378 (446)
...+.. ...|.++...+ ...+++..+..|.++...+.... .....+.. ...+..+........|+.
T Consensus 90 i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~~i~l 167 (312)
T 1suu_A 90 ISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDEKVIC 167 (312)
T ss_dssp GGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTCEEEE
T ss_pred hhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCCEEEE
Confidence 011221 23444443322 45678889999999998874321 11122332 345555555555567888
Q ss_pred EeCCCeEEEEEcCC---------CeeEeEeeccccCeEEEEEcCCCCcEEEEEecCCc
Q 013282 379 AEPADFVHVYDVKS---------GYEKEQEIDFFGEISGISFSPDTESLFIGVWDRTY 427 (446)
Q Consensus 379 ~~~dg~i~iwd~~~---------~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~ 427 (446)
.+.+|.+..+.... |.....+. ....|.++...+++..|++.+..|..
T Consensus 168 ~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~ 224 (312)
T 1suu_A 168 LSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYG 224 (312)
T ss_dssp EETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEE
T ss_pred EeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCce
Confidence 99999998888653 11111222 13456666555555666666666553
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=62.29 E-value=89 Score=28.12 Aligned_cols=190 Identities=10% Similarity=0.075 Sum_probs=106.0
Q ss_pred CCcEEEEeccCCcEEEEE---cCCCC----eeeE--EEEeecCCCceeeEEEEeCC--CCCeEEEEEeCCCcEEEEecCc
Q 013282 198 KDKLLVAGGFQGELICKH---LDRPG----VSFC--SRTTYDDNAITNAVEIYGSP--SGAVHFTASNNDCGVRDFDMGK 266 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~---~~~~~----~~~~--~~~~~~~~~~v~~i~~~~s~--~~~~~l~s~s~dg~v~iwd~~~ 266 (446)
....|+.-+..|.++-.. +.... .... ...+.....++..+.+ .. ... .++..+..|.|+-..+..
T Consensus 52 t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~--~~~~~e~-~~v~~T~~G~iKr~~l~~ 128 (327)
T 3uc1_A 52 THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQI--RGYTDAP-YLVLATRNGLVKKSKLTD 128 (327)
T ss_dssp TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEE--SSTTSSS-EEEEEETTSEEEEEEGGG
T ss_pred CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEe--ccCCCCC-EEEEEcCCCEEEEeEHHH
Confidence 566677677777665443 32221 0000 0011122333444444 32 334 688888999999988765
Q ss_pred ceee-------EeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECC--C----Cc-----eEEEecCCCCceeEEEECC
Q 013282 267 YQLS-------KHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM--T----GK-----TIASLCGHLDFSFASAWHP 328 (446)
Q Consensus 267 ~~~~-------~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~--~----~~-----~~~~~~~~~~~v~~~~~~p 328 (446)
.... ..+.....+..+........++..+..|.+..+... . ++ ....|. ....|.++...+
T Consensus 129 ~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~ 207 (327)
T 3uc1_A 129 FDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLLSLNVVR 207 (327)
T ss_dssp GCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEEEEEECC
T ss_pred hhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEEEEEEEC
Confidence 3321 123334455555555556678888899998888765 2 11 111222 345677776666
Q ss_pred CCCEEEEEeCCCcEEEEEccCCC------cceEEEe--cCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 329 NGVTFATGNQDKTCRIWDLRNLS------ESVAVLK--GNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 329 ~~~~l~sgs~d~~v~iwd~~~~~------~~~~~~~--~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
.+..++..+..|.++.-.+.... +-+..+. ...+.+..+....+...++..+.+|.+.-+...
T Consensus 208 ~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~~~~ 278 (327)
T 3uc1_A 208 EGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRTAAR 278 (327)
T ss_dssp TTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEEEGG
T ss_pred CCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEEehh
Confidence 66789999999999988864311 1122222 112344444444444566667778877777654
No 365
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=58.66 E-value=1.6e+02 Score=29.87 Aligned_cols=102 Identities=10% Similarity=-0.100 Sum_probs=57.0
Q ss_pred CeeEEEECCC-CCEEEEEecCCcEEEEECCCCceEEEecCC-------CCceeEEEECC-CCCEEEEEeCC-------Cc
Q 013282 278 PVNHSSQSPD-GKLLIIVGDNPDGLLVDSMTGKTIASLCGH-------LDFSFASAWHP-NGVTFATGNQD-------KT 341 (446)
Q Consensus 278 ~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~v~~~~~~p-~~~~l~sgs~d-------~~ 341 (446)
.|..++++|. ...++++...+.|+..+ ..|+.-..+..+ ...|.+++++| +...++.+... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999995 35666677666666654 234433333322 23588999998 43444433321 12
Q ss_pred EEEEEccCCCcceEEEec-CC--------CceEEEEEccCC-CEEEEEe
Q 013282 342 CRIWDLRNLSESVAVLKG-NL--------GAIRSIRYTSDG-RYMATAE 380 (446)
Q Consensus 342 v~iwd~~~~~~~~~~~~~-~~--------~~v~~l~~s~dg-~~l~~~~ 380 (446)
..||-....++.-..+.. .. ..+..|+++|.. ..|+.+.
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~ 151 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGT 151 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEEC
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEee
Confidence 456665554544433321 10 124678998853 5566565
No 366
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=57.70 E-value=1.7e+02 Score=29.95 Aligned_cols=142 Identities=9% Similarity=-0.059 Sum_probs=68.3
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC------CCceeeEEEEeCCCCCeEEEEEeCCCc---
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD------NAITNAVEIYGSPSGAVHFTASNNDCG--- 258 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~------~~~v~~i~~~~s~~~~~~l~s~s~dg~--- 258 (446)
.|.+|++ +...+++++..|.|...+ ..+..... +.... ...+.++.+ .|.....++++.....
T Consensus 16 ~i~~i~~~p~~~~~~~a~~~~ggv~rS~--DgG~tW~~-~~~~~~~~~~~~~~i~~ia~--dp~~~~~i~~~~g~~~~~~ 90 (789)
T 1sqj_A 16 YITGIVAHPKTKDLLYARTDIGGAYRWD--AGTSKWIP-LNDFIEAQDMNIMGTESIAL--DPNNPDRLYLAQGRYVGDE 90 (789)
T ss_dssp CEEEEEECSSSTTCEEEEESSSCEEEEE--TTTTEEEE-SCTTCCGGGGGGCSEEEEEE--ETTEEEEEEEEECSCTTSS
T ss_pred cEEEEEECCCCCCEEEEEecCCCEEEec--CCCCCeeE-CccCCCcccccCCceeEEEE--CCCCCCEEEEEeCccCCCc
Confidence 6888887 456777787777654433 33333222 21111 124666666 6654334555433211
Q ss_pred -EEEEe-cCcceeeEeeeC--------CC--CeeEEEECCC-CCEEEEEecCCcEEEEEC-CCCceEEEecC------CC
Q 013282 259 -VRDFD-MGKYQLSKHFRF--------PW--PVNHSSQSPD-GKLLIIVGDNPDGLLVDS-MTGKTIASLCG------HL 318 (446)
Q Consensus 259 -v~iwd-~~~~~~~~~~~~--------~~--~v~~~~~sp~-~~~l~~~~~d~~i~i~d~-~~~~~~~~~~~------~~ 318 (446)
-.||- ...++.=..+.. +. .+..++++|. .+.++++...+.| |-. ..|+.-..+.. ..
T Consensus 91 ~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 91 WAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp CCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTTSSCEEETTSCCCCSTT
T ss_pred ccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCCcccCCCccCccccCCC
Confidence 23332 222322111111 11 2557888884 4556666534433 322 23333222221 12
Q ss_pred CceeEEEECC-CCCEEEEEeCC
Q 013282 319 DFSFASAWHP-NGVTFATGNQD 339 (446)
Q Consensus 319 ~~v~~~~~~p-~~~~l~sgs~d 339 (446)
..+..+.++| ++..++.+..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4578899998 44556666554
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.66 E-value=32 Score=37.19 Aligned_cols=31 Identities=10% Similarity=0.071 Sum_probs=25.9
Q ss_pred CCCCCeEEEEEeCCCcEEEEecCcceeeEeee
Q 013282 243 SPSGAVHFTASNNDCGVRDFDMGKYQLSKHFR 274 (446)
Q Consensus 243 s~~~~~~l~s~s~dg~v~iwd~~~~~~~~~~~ 274 (446)
.++.. ++++-+.|+++|+|++.+++++.+..
T Consensus 246 ~~~~~-~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 246 LSTYN-VLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp ETTTT-EEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred cCCcc-EEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34544 78888999999999999999988765
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=57.08 E-value=53 Score=32.24 Aligned_cols=61 Identities=21% Similarity=0.210 Sum_probs=43.5
Q ss_pred CeeEEEECCCCCEEEEEec------------CCcEEEEECCCCceEEEecCC-CCceeEEEECCCCCEEEEEeC
Q 013282 278 PVNHSSQSPDGKLLIIVGD------------NPDGLLVDSMTGKTIASLCGH-LDFSFASAWHPNGVTFATGNQ 338 (446)
Q Consensus 278 ~v~~~~~sp~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~-~~~v~~~~~~p~~~~l~sgs~ 338 (446)
....|.|.++|.+.++... ...++.++..++++...+.+. ...++.++|+||++.|+++-+
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~vQ 550 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGIQ 550 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEEe
Confidence 3567999999986663321 225777787788876666543 356899999999998887754
No 369
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=56.54 E-value=1.8e+02 Score=29.81 Aligned_cols=147 Identities=13% Similarity=0.128 Sum_probs=76.0
Q ss_pred CCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecC--cceeeEeee-----CCCCeeEEEECCC-CCEEEEEecCCc----
Q 013282 232 NAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMG--KYQLSKHFR-----FPWPVNHSSQSPD-GKLLIIVGDNPD---- 299 (446)
Q Consensus 232 ~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~--~~~~~~~~~-----~~~~v~~~~~sp~-~~~l~~~~~d~~---- 299 (446)
.+.|.+|.+ +|.....++++...+.|...+=. +.+.+.... ....+.+++++|. .+.++++.....
T Consensus 14 ~g~i~~i~~--~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~ 91 (789)
T 1sqj_A 14 GGYITGIVA--HPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEW 91 (789)
T ss_dssp CSCEEEEEE--CSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSC
T ss_pred CCcEEEEEE--CCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcc
Confidence 346777777 78755567777777776655422 222221100 1246899999984 345555443211
Q ss_pred EEEEEC-CCCceEEEecCC-------C--CceeEEEECCC-CCEEEEEeCCCcEEEEEccCCCcceEEEec------CCC
Q 013282 300 GLLVDS-MTGKTIASLCGH-------L--DFSFASAWHPN-GVTFATGNQDKTCRIWDLRNLSESVAVLKG------NLG 362 (446)
Q Consensus 300 i~i~d~-~~~~~~~~~~~~-------~--~~v~~~~~~p~-~~~l~sgs~d~~v~iwd~~~~~~~~~~~~~------~~~ 362 (446)
..||-. ..|+.-..+... . ..+..++++|. ...++.+...+. ||-....++.-..+.. ...
T Consensus 92 ~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~~~~ 169 (789)
T 1sqj_A 92 AAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFTNGI 169 (789)
T ss_dssp CEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCSTTT
T ss_pred cEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccCCCC
Confidence 334433 344433332210 1 13567888884 456666654432 4444343443333321 124
Q ss_pred ceEEEEEccC-CCEEEEEeCC
Q 013282 363 AIRSIRYTSD-GRYMATAEPA 382 (446)
Q Consensus 363 ~v~~l~~s~d-g~~l~~~~~d 382 (446)
.+..|.++|. +..|+++..+
T Consensus 170 ~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 170 GYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CEEEEEECTTSTTCEEEEESS
T ss_pred CeEEEEECCCCCCEEEEEEcC
Confidence 5788999884 4455555544
No 370
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=55.71 E-value=41 Score=33.27 Aligned_cols=59 Identities=19% Similarity=0.231 Sum_probs=41.3
Q ss_pred eeEEEECCCCCEEEEEecC------------CcEEEEECCCCceEEEecCCC-CceeEEEECCCCCEEEEEe
Q 013282 279 VNHSSQSPDGKLLIIVGDN------------PDGLLVDSMTGKTIASLCGHL-DFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 279 v~~~~~sp~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~-~~v~~~~~~p~~~~l~sgs 337 (446)
.-.|+|+|.|+++++-..+ ..+.+.+..+++..+.+.+.. ..++.++|+|+++.|.+.-
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 3568999999855543221 235666777788776666543 5789999999998887653
No 371
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=53.15 E-value=2e+02 Score=29.18 Aligned_cols=222 Identities=12% Similarity=0.013 Sum_probs=111.8
Q ss_pred eEEEEEeCCcEEEEecc-----CCcEEEEEcCCCCeeeEEEEee-cCCC------ceeeEEEEeCCCCCeEEEEE-----
Q 013282 191 QVSTLAVKDKLLVAGGF-----QGELICKHLDRPGVSFCSRTTY-DDNA------ITNAVEIYGSPSGAVHFTAS----- 253 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~-----dg~i~vw~~~~~~~~~~~~~~~-~~~~------~v~~i~~~~s~~~~~~l~s~----- 253 (446)
.+.|+++++++++.+-+ -..|+++|+.+..... -.+. ..+. ....+.| - ++..++++.
T Consensus 133 g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~--~~~~~~~k~~~~~~~~~~~~~W--~-d~~~~~~~~~~~~~ 207 (711)
T 4hvt_A 133 GVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK--NGFEPITNSGKLLEGKFTYPTW--I-NKDTIIFNLVLHKN 207 (711)
T ss_dssp EEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT--TCSCCBCTTCCBCCEETCCEEE--E-ETTEEEECCCCSTT
T ss_pred ceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC--CCcccccccccccccccceeeE--E-CCCEEEEEeCCCCC
Confidence 35566667777665422 2368999998774321 0000 0000 0022244 2 223244432
Q ss_pred -----eCCCcEEEEecCcce--eeEeee--CCCCeeEEEECCCCC-----EEEEEec---CCcEEEEECCC--CceEEEe
Q 013282 254 -----NNDCGVRDFDMGKYQ--LSKHFR--FPWPVNHSSQSPDGK-----LLIIVGD---NPDGLLVDSMT--GKTIASL 314 (446)
Q Consensus 254 -----s~dg~v~iwd~~~~~--~~~~~~--~~~~v~~~~~sp~~~-----~l~~~~~---d~~i~i~d~~~--~~~~~~~ 314 (446)
+.-..|+.|.+-+.. -...+. ...--.....+++++ .+++.+. ...+++.++.. ++ +..+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l 286 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKI 286 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEEC
T ss_pred CcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEe
Confidence 122568888775532 222333 222223344566666 2344332 24567777653 33 2333
Q ss_pred cCCCCceeEEEECCCCCEEEEE----------eCCCcEEEEEccCC------CcceEE-Eec-CCCceEEEEEccCCCEE
Q 013282 315 CGHLDFSFASAWHPNGVTFATG----------NQDKTCRIWDLRNL------SESVAV-LKG-NLGAIRSIRYTSDGRYM 376 (446)
Q Consensus 315 ~~~~~~v~~~~~~p~~~~l~sg----------s~d~~v~iwd~~~~------~~~~~~-~~~-~~~~v~~l~~s~dg~~l 376 (446)
...... .+..++.+.+++.. ...+.|.+.|+... ....+. +.. ....+..+.|..+ .++
T Consensus 287 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 287 NMPSDA--TLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp CSCTTC--EEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred ecCCcc--eEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 222221 12344566655533 24667999998652 122333 322 2346778888876 566
Q ss_pred EEEeCCCe--EEEEEcCCCe-eEeEeecc--ccCeEEEEEcCCCCcEEEE
Q 013282 377 ATAEPADF--VHVYDVKSGY-EKEQEIDF--FGEISGISFSPDTESLFIG 421 (446)
Q Consensus 377 ~~~~~dg~--i~iwd~~~~~-~~~~~~~~--~~~v~~~~~spdg~~l~~~ 421 (446)
++...++. |.++++.++. ....+... .+.+..+.+++++..++..
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~ 413 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALIT 413 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEE
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEE
Confidence 67777764 7777876664 22331222 3567777777877665544
No 372
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=52.74 E-value=2e+02 Score=29.13 Aligned_cols=179 Identities=9% Similarity=-0.036 Sum_probs=92.7
Q ss_pred CCCCCeEEEEEeCCC----cEEEEecCcceeeE-eeeCCC---------CeeEEEECCCCCEEEEEe-----------cC
Q 013282 243 SPSGAVHFTASNNDC----GVRDFDMGKYQLSK-HFRFPW---------PVNHSSQSPDGKLLIIVG-----------DN 297 (446)
Q Consensus 243 s~~~~~~l~s~s~dg----~v~iwd~~~~~~~~-~~~~~~---------~v~~~~~sp~~~~l~~~~-----------~d 297 (446)
+|+++..+++-|..| .|+++|+.+++.+. .|. +. ....++|. +...++.+. ..
T Consensus 138 ~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 138 FQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp SSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBCTTSSB
T ss_pred CCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEE-CCCEEEEEeCCCCCCcCcCCCC
Confidence 778776666655544 59999999998764 222 11 01334675 444454432 13
Q ss_pred CcEEEEECCCCc--eEEEecCCCCc-eeEEEECCCCC-----EEEEEeCC---CcEEEEEccCCCcceEEEecCCCceEE
Q 013282 298 PDGLLVDSMTGK--TIASLCGHLDF-SFASAWHPNGV-----TFATGNQD---KTCRIWDLRNLSESVAVLKGNLGAIRS 366 (446)
Q Consensus 298 ~~i~i~d~~~~~--~~~~~~~~~~~-v~~~~~~p~~~-----~l~sgs~d---~~v~iwd~~~~~~~~~~~~~~~~~v~~ 366 (446)
..|+.|.+-+.. -...+.+.... ..+...+++++ .+++.+.+ ..+.+.+.......+..+..... ..
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~~ 293 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKLQKINMPSD--AT 293 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEEEECCSCTT--CE
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcceEeecCCc--ce
Confidence 468888876542 23334433332 23445566665 34444322 34566666432233333332222 12
Q ss_pred EEEccCCCEEEEE----------eCCCeEEEEEcCCCe-------eEeEeecc--ccCeEEEEEcCCCCcEEEEEecCC
Q 013282 367 IRYTSDGRYMATA----------EPADFVHVYDVKSGY-------EKEQEIDF--FGEISGISFSPDTESLFIGVWDRT 426 (446)
Q Consensus 367 l~~s~dg~~l~~~----------~~dg~i~iwd~~~~~-------~~~~~~~~--~~~v~~~~~spdg~~l~~~~~D~~ 426 (446)
+..++++.+++.. ...+.|.+.++.++. ....+..+ ...+.++.|..+ ..+++...++.
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~~~~~~~~ 371 (711)
T 4hvt_A 294 LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFLATYDNVV 371 (711)
T ss_dssp EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEEEEEETTE
T ss_pred EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEEEEEECCE
Confidence 3344566555522 246779999987641 22222322 345778888875 44444444443
No 373
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=51.50 E-value=79 Score=32.00 Aligned_cols=85 Identities=8% Similarity=0.036 Sum_probs=48.3
Q ss_pred eEEecccCeEEEecCCeEEEEecCCCCceEEEecCC-CCCCCCCCCCCccc---cCccceEEEEEeCCcEEEEeccCCcE
Q 013282 136 LVWATSKHDVYLMSHFSVIHWSSLTSSRSQVLNVSG-HVAPSEKHPGSLLE---GFTQTQVSTLAVKDKLLVAGGFQGEL 211 (446)
Q Consensus 136 l~~~~~~~~v~~~~~~~i~~w~~~~~~~~~~~~~~g-~~~~~~~~~g~~~~---~~~~~~v~~l~~~~~~l~tg~~dg~i 211 (446)
++.......+....||.+....-.....-....+.. .+..+ -.|-+.. ...+..|.|+.++..+|++-+.|.++
T Consensus 166 L~avs~~~liVsL~DGGLLrL~r~~~~d~~~~~Fnd~s~l~S--L~~lf~~~~~~~~~~~Is~~~~~~~fLftL~~Dh~L 243 (729)
T 3f7f_A 166 LFYVSPQFSVVFLEDGGLLGLKKVDGVHYEPLLFNDNSYLKC--LTRFFSRSSKSDYDSVISCKLFHERYLIVLTQNCHL 243 (729)
T ss_dssp EEECSSSBEEEEETTSCEECCEESSSSCEECCCCCCCGGGGG--GSTTCCTTCSSCCCCEEEEEEETTTEEEEEETTCEE
T ss_pred EEEECCCeEEEEEcCCCEEEEEeccCCCcceeeecCCchhhh--hHHhhcCCCCCCcCceEEEeccCCcEEEEEEcCCeE
Confidence 334455556666778888776644332111111111 01110 1111111 01223688888899999999999999
Q ss_pred EEEEcCCCCee
Q 013282 212 ICKHLDRPGVS 222 (446)
Q Consensus 212 ~vw~~~~~~~~ 222 (446)
|+|++.+....
T Consensus 244 RiWsL~t~~lv 254 (729)
T 3f7f_A 244 KIWDLTSFTLI 254 (729)
T ss_dssp EEEETTTTEEE
T ss_pred EEEEcCCCceE
Confidence 99999887533
No 374
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=49.86 E-value=1.3e+02 Score=26.20 Aligned_cols=141 Identities=7% Similarity=-0.028 Sum_probs=85.2
Q ss_pred EEEEEeCCCcEEEEecCcce------eeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCC---------CceEEE
Q 013282 249 HFTASNNDCGVRDFDMGKYQ------LSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT---------GKTIAS 313 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~------~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~---------~~~~~~ 313 (446)
.++..+..|.|+-..+.... ....+.....+..+........++..+..|.++.+.... |.....
T Consensus 82 ~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~ 161 (276)
T 3no0_A 82 RLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIK 161 (276)
T ss_dssp EEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCC
T ss_pred EEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEc
Confidence 67788899999998875532 222233445566666666666888889999988887521 112222
Q ss_pred ecCCCCceeEEEECCCCCEEEEEeCCCcEEEEEccCC------CcceEEEecCCCceEEEEEccCCCEEEEEeCCCeEEE
Q 013282 314 LCGHLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNL------SESVAVLKGNLGAIRSIRYTSDGRYMATAEPADFVHV 387 (446)
Q Consensus 314 ~~~~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~------~~~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~i 387 (446)
+.. .+.|.++...+++..++..+..|.++...+... ++-+..+ ...+.+..+........++..+.+|.+..
T Consensus 162 L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 162 LEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITTKNGKAFY 239 (276)
T ss_dssp CCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEETTSCEEE
T ss_pred cCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEcCCCeEEE
Confidence 332 355666555556678899999999999887431 1112222 22334444433333345666777787777
Q ss_pred --EEcC
Q 013282 388 --YDVK 391 (446)
Q Consensus 388 --wd~~ 391 (446)
+++.
T Consensus 240 ~~~~~~ 245 (276)
T 3no0_A 240 DKINQK 245 (276)
T ss_dssp EEEEGG
T ss_pred eeeCHH
Confidence 7654
No 375
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=46.09 E-value=1.8e+02 Score=26.78 Aligned_cols=237 Identities=12% Similarity=0.033 Sum_probs=112.5
Q ss_pred EEecccCeEEEecCCeEEEEecCCC-CceEEEecCCCCCCCCCCCCCccccCccceEEEEEeCCcEEEEeccC-CcEEEE
Q 013282 137 VWATSKHDVYLMSHFSVIHWSSLTS-SRSQVLNVSGHVAPSEKHPGSLLEGFTQTQVSTLAVKDKLLVAGGFQ-GELICK 214 (446)
Q Consensus 137 ~~~~~~~~v~~~~~~~i~~w~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~v~~l~~~~~~l~tg~~d-g~i~vw 214 (446)
+.+...+.+....++.+..|=.-.. +.-. -.......| ..+..+....|..++......++-..+ |.|+.|
T Consensus 21 ia~G~~hs~al~~~g~v~~wG~n~~GqLG~-g~~~~~~~P------~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~w 93 (406)
T 4d9s_A 21 ISAGASHSVALLSGDIVCSWGRGEDGQLGH-GDAEDRPSP------TQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSW 93 (406)
T ss_dssp EEECSSEEEEEETTTEEEEEECCTTSTTCS-SSCCCEEEE------EECGGGTTSCEEEEEECSSEEEEEETTTTEEEEE
T ss_pred EecCCCeEEEEEeCCEEEEEeCCCCCCCCC-CCcccCcCC------EEecccCCCCEEEEEeCcceEEEEECCCCEEEEE
Confidence 3556667777888889988854221 1000 000000000 001122233688888844444433444 589999
Q ss_pred EcCCCC--------eeeEEEEeec-CCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-ce---------e-eEeee
Q 013282 215 HLDRPG--------VSFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK-YQ---------L-SKHFR 274 (446)
Q Consensus 215 ~~~~~~--------~~~~~~~~~~-~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~-~~---------~-~~~~~ 274 (446)
-....+ .......... ....|..+.. |..+.++-..+|.|+.|-... ++ . ...+.
T Consensus 94 G~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~-----G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~ 168 (406)
T 4d9s_A 94 GWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIAC-----GDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQ 168 (406)
T ss_dssp ECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEE-----CSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECG
T ss_pred cCCCCcCCCCCCCCccccceEecccCCCCEEEEEE-----ChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEec
Confidence 643221 1111111111 1123444432 223455566899999996432 11 0 11111
Q ss_pred --CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-Cc---------eE-EEecC-CCCceeEEEECCCCCEEEEEeCCC
Q 013282 275 --FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GK---------TI-ASLCG-HLDFSFASAWHPNGVTFATGNQDK 340 (446)
Q Consensus 275 --~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~---------~~-~~~~~-~~~~v~~~~~~p~~~~l~sgs~d~ 340 (446)
....|..++.. ..+.++...+|.|+.|-... ++ .. ..+.. ....|..++.. ..+.+.-..+|
T Consensus 169 ~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G 244 (406)
T 4d9s_A 169 AFEGIRIKMVAAG--AEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSG 244 (406)
T ss_dssp GGTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTC
T ss_pred ccCCCcEEEEecC--CCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCC
Confidence 12245555543 45666677899999997532 11 11 11111 12345555443 33455556788
Q ss_pred cEEEEEccCCCcc----------eEEEec-CCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 341 TCRIWDLRNLSES----------VAVLKG-NLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 341 ~v~iwd~~~~~~~----------~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
.|..|=....++. ...+.. ....|..|+.. ..+.+.-..+|.|+.|=..
T Consensus 245 ~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n 304 (406)
T 4d9s_A 245 ALYTYGWSKYGQLGHGDLEDHLIPHKLEALSNSFISQISGG--WRHTMALTSDGKLYGWGWN 304 (406)
T ss_dssp CEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECC
T ss_pred CEEEeeCCCCCCCCCCCCcCccccEEecccCCCCEEEEEec--CCEEEEEcCCCeEEEeeCC
Confidence 8888875332211 011111 12235555543 3344555678888888543
No 376
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=44.48 E-value=1.7e+02 Score=26.11 Aligned_cols=188 Identities=10% Similarity=-0.049 Sum_probs=99.7
Q ss_pred CCcEEEEeccCCcEEEEEcCCC---CeeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec---Cc-----
Q 013282 198 KDKLLVAGGFQGELICKHLDRP---GVSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM---GK----- 266 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~---~~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~---~~----- 266 (446)
+..++++.+.+|.|+--.+..- ... ...+......+..+.. +.. . .++..++.|.++-+.. +.
T Consensus 4 ~e~~~v~lT~~G~IKr~~~~~~~~~~~~--~~~lke~D~l~~~~~~--~t~-d-~ll~fT~~Gr~~~~~~~elp~~~r~a 77 (323)
T 1wp5_A 4 SEDVIVTVTKDGYVKRTSLRSYAASNGQ--DFAMKDTDRLLAMLEM--NTK-D-VLLLFTNKGNYLYCPVHELPDIRWKD 77 (323)
T ss_dssp CCEEEEEEETTCEEEEEEHHHHHHTTTC--CCCCCTTCCEEEEEEE--ETT-S-EEEEEETTSEEEEEEGGGSCBCCTTS
T ss_pred CCcEEEEEeCCCEEEEeEHHHhhhcCcc--ccccCCCCEEEEEEEE--CCC-C-EEEEEECCCEEEEEEHHHCcCCCCCC
Confidence 4566788888888876554311 100 0011222222322222 222 3 3555557787665543 22
Q ss_pred -ceeeEe---eeCCCCeeEE-EECC--CCCEEEEEecCCcEEEEECC--------CCceEEEecCCCCceeEEEECCCCC
Q 013282 267 -YQLSKH---FRFPWPVNHS-SQSP--DGKLLIIVGDNPDGLLVDSM--------TGKTIASLCGHLDFSFASAWHPNGV 331 (446)
Q Consensus 267 -~~~~~~---~~~~~~v~~~-~~sp--~~~~l~~~~~d~~i~i~d~~--------~~~~~~~~~~~~~~v~~~~~~p~~~ 331 (446)
|.++.. +.....|..+ .+.+ ++.+++.++.+|.++...+. .|.....+.. .+.+..+.......
T Consensus 78 ~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e-~d~lv~~~~~~~~~ 156 (323)
T 1wp5_A 78 LGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKN-DDQVVDVHLTDGMN 156 (323)
T ss_dssp CCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCT-TCCEEEEEEECSCS
T ss_pred CCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCC-CCEEEEEEEeCCCC
Confidence 332221 2234455554 3432 35678999999999988763 1222222332 25555555555556
Q ss_pred EEEEEeCCCcEEEEEccCC---Cc---ceEEEec-CCCceEEEEEccCCC-EEEEEeCCCeEEEEEcCC
Q 013282 332 TFATGNQDKTCRIWDLRNL---SE---SVAVLKG-NLGAIRSIRYTSDGR-YMATAEPADFVHVYDVKS 392 (446)
Q Consensus 332 ~l~sgs~d~~v~iwd~~~~---~~---~~~~~~~-~~~~v~~l~~s~dg~-~l~~~~~dg~i~iwd~~~ 392 (446)
.++..+.+|.+..+....- ++ -+..+.- ....|.++..-+++. .|++.+..|..+..++..
T Consensus 157 ~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~e 225 (323)
T 1wp5_A 157 ELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLTE 225 (323)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGGG
T ss_pred EEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHHH
Confidence 7888888998888876321 11 1111111 123455554434444 788888899888877653
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=44.37 E-value=39 Score=34.14 Aligned_cols=37 Identities=14% Similarity=0.152 Sum_probs=29.0
Q ss_pred CceEEEEEccCCCEEEEEeCCCeEEEEEcCCCeeEeEee
Q 013282 362 GAIRSIRYTSDGRYMATAEPADFVHVYDVKSGYEKEQEI 400 (446)
Q Consensus 362 ~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~~~~~~~~~~ 400 (446)
..|.++.+ +..+|++-+.|..+|+|+++++.++....
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34665554 46799999999999999999998765543
No 378
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=41.33 E-value=1.8e+02 Score=25.31 Aligned_cols=145 Identities=8% Similarity=-0.079 Sum_probs=81.9
Q ss_pred CCcEEEEeccCCcEEEEEcCCCC----eeeEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEecCc-------
Q 013282 198 KDKLLVAGGFQGELICKHLDRPG----VSFCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDMGK------- 266 (446)
Q Consensus 198 ~~~~l~tg~~dg~i~vw~~~~~~----~~~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~~~------- 266 (446)
+..+++..+.+|.++-..+..-. ... ...+.... .+..+.. ..... .++..+..|.+..+....
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~-~i~lkegD-~l~~~~~--~~~~~-~ill~T~~G~~~r~~~~eip~~gR~ 153 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMP-IIKLTEGD-EVVSIAS--SVDET-HILLFTKKGRVARFSVREVPPSTPG 153 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEE-CSCCCTTC-CEEEEEE--CCSSC-EEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeE-EEecCCCC-EEEEEEE--eCCCC-EEEEEECCCEEEEEEhhhCCCcCCC
Confidence 46799999999999988875431 110 11112222 3333333 23333 466677889888886532
Q ss_pred --ceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECC-------CCceEEEecCCCCceeEEEECCCCCEEEEEe
Q 013282 267 --YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSM-------TGKTIASLCGHLDFSFASAWHPNGVTFATGN 337 (446)
Q Consensus 267 --~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~~p~~~~l~sgs 337 (446)
|.....+.....|..+...+++..++..+..|.++...+. .++-+..+ ...+.+..+........++..+
T Consensus 154 a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~~i~~~t 232 (276)
T 3no0_A 154 ARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEVELLITT 232 (276)
T ss_dssp CCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEEEEEEEE
T ss_pred CCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCCEEEEEc
Confidence 2222223344566666555566788889999999888753 22233333 2334444443333334566667
Q ss_pred CCCcEEE--EEcc
Q 013282 338 QDKTCRI--WDLR 348 (446)
Q Consensus 338 ~d~~v~i--wd~~ 348 (446)
.+|.+.. ++..
T Consensus 233 ~~G~~ir~~~~~~ 245 (276)
T 3no0_A 233 KNGKAFYDKINQK 245 (276)
T ss_dssp TTSCEEEEEEEGG
T ss_pred CCCeEEEeeeCHH
Confidence 7777766 7663
No 379
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=39.31 E-value=2.1e+02 Score=25.60 Aligned_cols=153 Identities=10% Similarity=0.031 Sum_probs=85.1
Q ss_pred eEEEEEe-----CCcEEEEeccCCcEEEEEcCCCCee----eEEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 191 QVSTLAV-----KDKLLVAGGFQGELICKHLDRPGVS----FCSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 191 ~v~~l~~-----~~~~l~tg~~dg~i~vw~~~~~~~~----~~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
.|.++.. +..++++.+.+|.|+--.+..-... .....+......+..... +. .. .++..+..|.+..
T Consensus 96 ~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~--~~-~d-~ill~T~~G~~~r 171 (327)
T 3uc1_A 96 RIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLC--SA-GD-DLLLVSANGQSIR 171 (327)
T ss_dssp CEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEE--CT-TC-EEEEEETTSEEEE
T ss_pred EEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEe--cC-CC-EEEEEECCCeEEE
Confidence 4555543 3689999999999998876542111 001112233333333322 33 33 4666678888887
Q ss_pred EecC--c---------ceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-------CceEEEec--CCCCce
Q 013282 262 FDMG--K---------YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-------GKTIASLC--GHLDFS 321 (446)
Q Consensus 262 wd~~--~---------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-------~~~~~~~~--~~~~~v 321 (446)
+... . |.....+.....|.++...+.+..++.++..|.++...+.. ++-+..++ .-.+.+
T Consensus 172 f~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~l 251 (327)
T 3uc1_A 172 FSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRL 251 (327)
T ss_dssp EECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSE
T ss_pred EECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeE
Confidence 7665 2 22222233455677777666677899999999998877531 12222222 213344
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEEc
Q 013282 322 FASAWHPNGVTFATGNQDKTCRIWDL 347 (446)
Q Consensus 322 ~~~~~~p~~~~l~sgs~d~~v~iwd~ 347 (446)
..+........++..+.+|.+.-+..
T Consensus 252 v~~~~~~~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 252 VGALIVDDDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp EEEEEECTTCEEEEEEGGGCEEEEEG
T ss_pred EEEEEeCCCccEEEEcCCCeEEEEeh
Confidence 44443334445666666777666665
No 380
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=39.12 E-value=2e+02 Score=25.37 Aligned_cols=187 Identities=10% Similarity=0.021 Sum_probs=99.0
Q ss_pred CcEEEEeccCCcEEEEEcCCCCeee------EEEEeecCCCceeeEEEEeCCCCCeEEEEEeCCCcEEEEec---Cc---
Q 013282 199 DKLLVAGGFQGELICKHLDRPGVSF------CSRTTYDDNAITNAVEIYGSPSGAVHFTASNNDCGVRDFDM---GK--- 266 (446)
Q Consensus 199 ~~~l~tg~~dg~i~vw~~~~~~~~~------~~~~~~~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~iwd~---~~--- 266 (446)
..++++.+.+|.|+--.+..-.... ....+......+..+.. +.. . .++..++.|.++-+.. +.
T Consensus 3 e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~--~~~-~-~ll~fT~~G~~~~~~~~elp~~~~ 78 (307)
T 1zi0_A 3 EDVVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVA--NTH-D-HILCFSSRGRVYSMKVYQLPEATR 78 (307)
T ss_dssp CEEEEEEETTSEEEEEECC--------------------CCEEEEEEE--ETT-C-EEEEEETTSEEEEEEGGGSCCCCS
T ss_pred CcEEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEE--CCC-C-EEEEEECCCEEEEEEhhHCcCCCC
Confidence 4567888889988766554321100 00011122222222222 222 3 3555567787665543 22
Q ss_pred ---ceeeE---eeeCCCCeeEEEE-C--CCCCEEEEEecCCcEEEEECC-------CCceEEEecCCCCceeEEEECCCC
Q 013282 267 ---YQLSK---HFRFPWPVNHSSQ-S--PDGKLLIIVGDNPDGLLVDSM-------TGKTIASLCGHLDFSFASAWHPNG 330 (446)
Q Consensus 267 ---~~~~~---~~~~~~~v~~~~~-s--p~~~~l~~~~~d~~i~i~d~~-------~~~~~~~~~~~~~~v~~~~~~p~~ 330 (446)
|.++. .+.....|..+.. . .++..++.++..|.++-..+. .|.....+..+ +.+..+......
T Consensus 79 ~a~G~~i~~~l~l~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~ 157 (307)
T 1zi0_A 79 GARGRPIVNLLPLEQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE 157 (307)
T ss_dssp SSCCEEGGGTSCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT
T ss_pred CCCCeEhhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC
Confidence 33222 2234445665543 2 356678899999999988763 12222233333 555555554455
Q ss_pred CEEEEEeCCCcEEEEEccCC---Cc---ceE--EEecCCCceEEEEEccCCCEEEEEeCCCeEEEEEcC
Q 013282 331 VTFATGNQDKTCRIWDLRNL---SE---SVA--VLKGNLGAIRSIRYTSDGRYMATAEPADFVHVYDVK 391 (446)
Q Consensus 331 ~~l~sgs~d~~v~iwd~~~~---~~---~~~--~~~~~~~~v~~l~~s~dg~~l~~~~~dg~i~iwd~~ 391 (446)
..++..+..|.+..+....- ++ -+. .+.. ...|.++...+++..|++.+..|.++-.++.
T Consensus 158 ~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~~-~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~~ 225 (307)
T 1zi0_A 158 DEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLGE-GDKVVSLIVPRGDGAILTATQNGYGKRTAVA 225 (307)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEECCCSSCEEEEEETTSEEEEECGG
T ss_pred CEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeCC-CCEEEEEEEecCCCEEEEEEcCCceEEEEHH
Confidence 56778888888887776321 11 111 1221 2346666555556678888999998888763
No 381
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=37.94 E-value=3.3e+02 Score=27.48 Aligned_cols=227 Identities=12% Similarity=0.072 Sum_probs=101.4
Q ss_pred eEEEEEe---CCcEEEEeccCCcEEEEEcCCCCeeeEEEEeecC------CCceeeEEEEeCCCCCeEEEEEeCC-----
Q 013282 191 QVSTLAV---KDKLLVAGGFQGELICKHLDRPGVSFCSRTTYDD------NAITNAVEIYGSPSGAVHFTASNND----- 256 (446)
Q Consensus 191 ~v~~l~~---~~~~l~tg~~dg~i~vw~~~~~~~~~~~~~~~~~------~~~v~~i~~~~s~~~~~~l~s~s~d----- 256 (446)
.|..+++ +.+.|+++...|.|... ...+..... +.... ...+.+|.+ +|.....++++...
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS--~D~G~tW~~-i~~~~~~~~~~~~~i~~i~~--dp~~~~~v~v~~~~~~~~~ 98 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRW--DPSTETWIP-LLDHFQMDEYSYYGVESIAT--DPVDPNRVYIVAGMYTNDW 98 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEE--ETTTTEEEE-CCTTCCGGGGGGGCEEEEEE--CSSSTTCEEEEECSCSSSS
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEe--CCCCCCEEE-CcCccCcccccCCCcceEEe--CCCCCCEEEEEeccccccc
Confidence 4667776 44667777766665443 333333222 21111 123666666 77443234443321
Q ss_pred --CcEEEEec-Ccce---eeEe-eeC----C--CCeeEEEECCC-CCEEEEEecCCcEEEEECC-CCceEEEecC---C-
Q 013282 257 --CGVRDFDM-GKYQ---LSKH-FRF----P--WPVNHSSQSPD-GKLLIIVGDNPDGLLVDSM-TGKTIASLCG---H- 317 (446)
Q Consensus 257 --g~v~iwd~-~~~~---~~~~-~~~----~--~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~---~- 317 (446)
+...||.- ..++ .+.. +.. + ..+..++++|. .+.++++...+. -||-.. .|+.-..+.. +
T Consensus 99 ~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~~~~~~~ 177 (737)
T 2cn3_A 99 LPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVESFPNPG 177 (737)
T ss_dssp SCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECTTCCCCC
T ss_pred ccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceecccCCCCCc
Confidence 12345533 2222 2221 110 0 12467899984 456666653321 233322 2322222211 1
Q ss_pred -------------CCceeEEEECCCC-------CEEEEEeCCCcEEEEEccCCCcceEEEecCC-C-ceEEEEEccCCCE
Q 013282 318 -------------LDFSFASAWHPNG-------VTFATGNQDKTCRIWDLRNLSESVAVLKGNL-G-AIRSIRYTSDGRY 375 (446)
Q Consensus 318 -------------~~~v~~~~~~p~~-------~~l~sgs~d~~v~iwd~~~~~~~~~~~~~~~-~-~v~~l~~s~dg~~ 375 (446)
...+..+.++|.. ..++.+..++.-.||-....++.-..+.+.. + ....+.++|++.+
T Consensus 178 ~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~~~~~~~~~~~~~~~l 257 (737)
T 2cn3_A 178 TYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPKGLLPHHGVLASNGML 257 (737)
T ss_dssp CCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCCSSEEEEEEECTTSEE
T ss_pred ccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCCcccceEEEECCCCeE
Confidence 1236778888743 2556665554323454444344433333211 1 1234567887765
Q ss_pred EEEEe---------CCCeEEEEEcCCCeeEeEeecc-c------cCeEEEEEcCC-CCcEEEEEec
Q 013282 376 MATAE---------PADFVHVYDVKSGYEKEQEIDF-F------GEISGISFSPD-TESLFIGVWD 424 (446)
Q Consensus 376 l~~~~---------~dg~i~iwd~~~~~~~~~~~~~-~------~~v~~~~~spd-g~~l~~~~~D 424 (446)
+++.. ..+.|...+-... .-..+... . .....|+++|. ...|+++..+
T Consensus 258 ~~~~~d~~g~y~~~~~g~v~~s~d~G~-tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 258 YITYGDTCGPYDGNGKGQVWKFNTRTG-EWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEEEESSCCSSCCSCCEEEEEEETTTC-CEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred EEEecCCCCccccccCceEEEEeCCCC-CEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 55442 2334554443222 22221111 1 11246888885 3456666543
No 382
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=36.81 E-value=2.2e+02 Score=25.12 Aligned_cols=177 Identities=8% Similarity=-0.011 Sum_probs=94.0
Q ss_pred EEEEEeCCCcEEEEecCcceeeE---------eeeCCCCeeEEEECCCCCEEEEEecCCcEEEEEC---C------CCce
Q 013282 249 HFTASNNDCGVRDFDMGKYQLSK---------HFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVDS---M------TGKT 310 (446)
Q Consensus 249 ~l~s~s~dg~v~iwd~~~~~~~~---------~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~---~------~~~~ 310 (446)
.+++.+.+|.|+--.+...+..+ .+.....+..+........|+..+..|.++-+.. . .|.+
T Consensus 5 ~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~elp~~~~~a~G~~ 84 (307)
T 1zi0_A 5 VVVTLSHQGYVKYQPLSEYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVYQLPEATRGARGRP 84 (307)
T ss_dssp EEEEEETTSEEEEEECC--------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCCCCSSSCCEE
T ss_pred EEEEEeCCCEEEEeeHHHhhhhccCCCCceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhhHCcCCCCCCCCeE
Confidence 56777888988877765543221 1223344444444445567777777888766553 2 1222
Q ss_pred EE---EecCCCCceeEEEE-C--CCCCEEEEEeCCCcEEEEEccCCC----c--ceEEEecCCCceEEEEEccCCCEEEE
Q 013282 311 IA---SLCGHLDFSFASAW-H--PNGVTFATGNQDKTCRIWDLRNLS----E--SVAVLKGNLGAIRSIRYTSDGRYMAT 378 (446)
Q Consensus 311 ~~---~~~~~~~~v~~~~~-~--p~~~~l~sgs~d~~v~iwd~~~~~----~--~~~~~~~~~~~v~~l~~s~dg~~l~~ 378 (446)
+. .+. ....|.++.. . +++.+++..+..|.++-..+.... . ....+..+ ..+..+........|+.
T Consensus 85 i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~~~i~l 162 (307)
T 1zi0_A 85 IVNLLPLE-QDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGEDEVML 162 (307)
T ss_dssp GGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTTCEEEE
T ss_pred hhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCCCEEEE
Confidence 21 122 2334555433 2 355688999999999999874211 1 11122333 45555555455567888
Q ss_pred EeCCCeEEEEEcCCC---------eeEeEeeccccCeEEEEEcCCCCcEEEEEecCCcc
Q 013282 379 AEPADFVHVYDVKSG---------YEKEQEIDFFGEISGISFSPDTESLFIGVWDRTYG 428 (446)
Q Consensus 379 ~~~dg~i~iwd~~~~---------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~D~~~~ 428 (446)
.+..|.+..+....- .....+. ....|.++...+++..|++.+..|..+
T Consensus 163 ~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~K 220 (307)
T 1zi0_A 163 FSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGK 220 (307)
T ss_dssp EETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEE
T ss_pred ECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceE
Confidence 888998888876431 1111111 223566665544555666666665544
No 383
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=35.17 E-value=2.6e+02 Score=25.51 Aligned_cols=185 Identities=7% Similarity=-0.048 Sum_probs=0.0
Q ss_pred CCCCeEEEEEeCCCcEEEEecCc---------ceeeEeeeCCCCeeEEEECCCCCEEEEEecCCcEEEEE---------C
Q 013282 244 PSGAVHFTASNNDCGVRDFDMGK---------YQLSKHFRFPWPVNHSSQSPDGKLLIIVGDNPDGLLVD---------S 305 (446)
Q Consensus 244 ~~~~~~l~s~s~dg~v~iwd~~~---------~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d---------~ 305 (446)
|+.. .+++.+.+|.|+--.+.. +..-..++....+..+........|+..+..|.++-+. .
T Consensus 5 ~~e~-~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~ 83 (370)
T 3l6v_A 5 APED-VVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAASTKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSN 83 (370)
T ss_dssp CCCC-EEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEECSCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred cCCC-EEEEEeCCCEEEEeeHHHhhhhccCCCCceecccCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCcc
Q ss_pred CCCceEEE---ecCCCCceeEEEECC--CCCEEEEEeCCCcEEEEEc------cCCCcceEEEecCCCceEEEEEccCCC
Q 013282 306 MTGKTIAS---LCGHLDFSFASAWHP--NGVTFATGNQDKTCRIWDL------RNLSESVAVLKGNLGAIRSIRYTSDGR 374 (446)
Q Consensus 306 ~~~~~~~~---~~~~~~~v~~~~~~p--~~~~l~sgs~d~~v~iwd~------~~~~~~~~~~~~~~~~v~~l~~s~dg~ 374 (446)
..|.++.. +.....-+..+.+.. .+.+|+.++..|.++...+ +..+.....+.. ...+..+.......
T Consensus 84 a~G~~i~~ll~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~~ 162 (370)
T 3l6v_A 84 ARGRPIINWIPLESGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGDR 162 (370)
T ss_dssp SCCEEGGGSCCCCTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSCC
T ss_pred cCCcCHhhccCCCCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCCc
Q ss_pred EEEEEeCCCeEEEEEcCCCeeEeEe--------eccccCeEEEEEcC---------------------------------
Q 013282 375 YMATAEPADFVHVYDVKSGYEKEQE--------IDFFGEISGISFSP--------------------------------- 413 (446)
Q Consensus 375 ~l~~~~~dg~i~iwd~~~~~~~~~~--------~~~~~~v~~~~~sp--------------------------------- 413 (446)
.|+..+..|.+..|....-...... ......|.++...+
T Consensus 163 ~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~~~ 242 (370)
T 3l6v_A 163 DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDVAD 242 (370)
T ss_dssp EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-------------------------------
T ss_pred eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccccc
Q ss_pred --CCCcEEEEEecCCcceE
Q 013282 414 --DTESLFIGVWDRTYGSL 430 (446)
Q Consensus 414 --dg~~l~~~~~D~~~~~~ 430 (446)
.+..|++.+..|..+..
T Consensus 243 ~~~~~~il~vTe~G~gKrt 261 (370)
T 3l6v_A 243 NGDVAYILTATENGYGKRT 261 (370)
T ss_dssp ----CEEEEEETTSEEEEE
T ss_pred ccCCceEEEeeCCCCEEEE
No 384
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=30.82 E-value=3.2e+02 Score=25.09 Aligned_cols=191 Identities=14% Similarity=0.082 Sum_probs=97.7
Q ss_pred ceEEEEEeCCcEEEEeccCCcEEEEEcCCCCe--------eeEEEEeec-CCCceeeEEEEeCCCCCeEEEEEeCCCcEE
Q 013282 190 TQVSTLAVKDKLLVAGGFQGELICKHLDRPGV--------SFCSRTTYD-DNAITNAVEIYGSPSGAVHFTASNNDCGVR 260 (446)
Q Consensus 190 ~~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~~--------~~~~~~~~~-~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~ 260 (446)
..|..++......++-..+|.|+.|-....+. ......... ....|..+.. |..+.++-..+|.|+
T Consensus 121 ~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~i~~va~-----G~~hs~alt~~G~v~ 195 (406)
T 4d9s_A 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAFEGIRIKMVAA-----GAEHTAAVTEDGDLY 195 (406)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTCCEEEEEE-----CSSEEEEEETTSCEE
T ss_pred CCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEecccCCCcEEEEec-----CCCeEEEEeCCCCEE
Confidence 36888888666666677899999997654321 111111111 1123333432 222455556899999
Q ss_pred EEecCcc-e---------ee-Eeee--CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-Cce----------EEEecC
Q 013282 261 DFDMGKY-Q---------LS-KHFR--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GKT----------IASLCG 316 (446)
Q Consensus 261 iwd~~~~-~---------~~-~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~~----------~~~~~~ 316 (446)
.|-.... + .. ..+. ....|..++.. ..+.++...+|.|+.|-... +++ ...+..
T Consensus 196 ~wG~n~~GqlG~g~~~~~~~p~~v~~~~~~~i~~va~G--~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~ 273 (406)
T 4d9s_A 196 GWGWGRYGNLGLGDRTDRLVPERVTSTGGEKMSMVACG--WRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA 273 (406)
T ss_dssp EEECCTTSTTCSSSSCCEEEEEECCCSTTCCEEEEEEC--SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGG
T ss_pred EeeCCCCCCCCCCCCCCcCccEEecccCCceEEEEEEC--CCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecc
Confidence 9964321 1 11 1111 12345555443 44556667888999987532 111 111211
Q ss_pred -CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCc-----------ceEEEecCCCceEEEEEccCCCEEEEEeCCCe
Q 013282 317 -HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE-----------SVAVLKGNLGAIRSIRYTSDGRYMATAEPADF 384 (446)
Q Consensus 317 -~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~-----------~~~~~~~~~~~v~~l~~s~dg~~l~~~~~dg~ 384 (446)
....|..++-. ....+.-..+|.|..|=....++ +..........|..|+.. ..+.++-..+|.
T Consensus 274 ~~~~~v~~i~~G--~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~va~G--~~hs~alt~~G~ 349 (406)
T 4d9s_A 274 LSNSFISQISGG--WRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQVSCG--WRHTLAVTERNN 349 (406)
T ss_dssp GTTSCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEEEEC--SSEEEEEETTSC
T ss_pred cCCCCEEEEEec--CCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEEEeC--CCeEEEEeCCCC
Confidence 12235555432 33445556788888886533221 111111122346566543 334555567888
Q ss_pred EEEEEcC
Q 013282 385 VHVYDVK 391 (446)
Q Consensus 385 i~iwd~~ 391 (446)
|+.|=..
T Consensus 350 v~~wG~n 356 (406)
T 4d9s_A 350 VFAWGRG 356 (406)
T ss_dssp EEEEECC
T ss_pred EEEecCC
Confidence 9999643
No 385
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=22.27 E-value=4.4e+02 Score=23.87 Aligned_cols=193 Identities=11% Similarity=0.045 Sum_probs=99.3
Q ss_pred eEEEEEeCCcEEEEeccCCcEEEEEcCCCC--------eeeEEEEee-cCCCceeeEEEEeCCCCCeEEEEEeCCCcEEE
Q 013282 191 QVSTLAVKDKLLVAGGFQGELICKHLDRPG--------VSFCSRTTY-DDNAITNAVEIYGSPSGAVHFTASNNDCGVRD 261 (446)
Q Consensus 191 ~v~~l~~~~~~l~tg~~dg~i~vw~~~~~~--------~~~~~~~~~-~~~~~v~~i~~~~s~~~~~~l~s~s~dg~v~i 261 (446)
.|..++......+.-..+|.|..|-....+ ......... .....+..+.+ +.... +.++-..+|.|+.
T Consensus 54 ~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~v~i--~~G~~-h~~al~~~G~v~~ 130 (389)
T 3kci_A 54 RPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKVAV--NSGGK-HCLALSSEGEVYS 130 (389)
T ss_dssp CEEEEEEETTEEEEEETTSCEEEEECCGGGTTSSSSSCCEEEEEECGGGTTSCEEEEEE--CTTCS-EEEEEETTSCEEE
T ss_pred ceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCCCCcCCccCCEEcccccCCceeEEEE--CcCCC-eEEEEcCCCCEEE
Confidence 466666655666666778999998654321 111111111 12223344555 44333 5666678999999
Q ss_pred EecCc-ce----------eeEeee--CCCCeeEEEECCCCCEEEEEecCCcEEEEECCC-Cc----------eEEEecC-
Q 013282 262 FDMGK-YQ----------LSKHFR--FPWPVNHSSQSPDGKLLIIVGDNPDGLLVDSMT-GK----------TIASLCG- 316 (446)
Q Consensus 262 wd~~~-~~----------~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~-~~----------~~~~~~~- 316 (446)
|-... ++ ....+. ....|..++. -..+.++...+|.|+.|-... ++ ....+..
T Consensus 131 wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~--G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~ 208 (389)
T 3kci_A 131 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAA--GGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL 208 (389)
T ss_dssp EECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEE--CSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG
T ss_pred EeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEe--CcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc
Confidence 95432 11 111111 1224555554 345666777899999997532 11 0111111
Q ss_pred CCCceeEEEECCCCCEEEEEeCCCcEEEEEccCCCc----------ceEEEec-CCCceEEEEEccCCCEEEEEeCCCeE
Q 013282 317 HLDFSFASAWHPNGVTFATGNQDKTCRIWDLRNLSE----------SVAVLKG-NLGAIRSIRYTSDGRYMATAEPADFV 385 (446)
Q Consensus 317 ~~~~v~~~~~~p~~~~l~sgs~d~~v~iwd~~~~~~----------~~~~~~~-~~~~v~~l~~s~dg~~l~~~~~dg~i 385 (446)
....|..++........+.-..+|.|..|=....++ ....+.. ....|..|+... .+.+.-..+|.|
T Consensus 209 ~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v 286 (389)
T 3kci_A 209 QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAV 286 (389)
T ss_dssp TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCE
T ss_pred CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeE
Confidence 123466666543335566667889999996532111 0111111 112355555433 344445678888
Q ss_pred EEEEc
Q 013282 386 HVYDV 390 (446)
Q Consensus 386 ~iwd~ 390 (446)
+.|-.
T Consensus 287 ~~wG~ 291 (389)
T 3kci_A 287 YTWGK 291 (389)
T ss_dssp EEEEC
T ss_pred EEEeC
Confidence 88864
Done!