Query 013284
Match_columns 446
No_of_seqs 165 out of 793
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 07:41:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4h08_A Putative hydrolase; GDS 95.7 0.0078 2.7E-07 54.1 4.4 51 242-317 74-124 (200)
2 3p94_A GDSL-like lipase; serin 92.9 0.14 4.7E-06 45.4 5.8 31 283-316 96-126 (204)
3 1yzf_A Lipase/acylhydrolase; s 79.4 5.3 0.00018 34.3 7.5 29 283-316 88-116 (195)
4 4hf7_A Putative acylhydrolase; 74.0 1.5 5.1E-05 39.4 2.5 31 284-317 101-131 (209)
5 3dci_A Arylesterase; SGNH_hydr 63.4 49 0.0017 29.6 10.5 34 283-316 122-159 (232)
6 1vjg_A Putative lipase from th 62.2 19 0.00067 31.7 7.3 29 283-315 112-140 (218)
7 3hp4_A GDSL-esterase; psychrot 61.0 2.4 8.3E-05 36.6 0.9 46 242-312 66-111 (185)
8 3rjt_A Lipolytic protein G-D-S 55.0 4.4 0.00015 35.4 1.6 26 283-311 112-137 (216)
9 1ivn_A Thioesterase I; hydrola 49.3 5.1 0.00017 34.8 1.1 27 283-312 81-107 (190)
10 2hsj_A Putative platelet activ 47.7 1.3E+02 0.0045 25.8 10.3 34 283-317 104-137 (214)
11 1yzf_A Lipase/acylhydrolase; s 45.6 6.4 0.00022 33.7 1.1 13 150-162 2-14 (195)
12 3mil_A Isoamyl acetate-hydroly 44.5 5.7 0.00019 35.5 0.6 55 241-316 71-125 (240)
13 2q0q_A ARYL esterase; SGNH hyd 42.6 7.1 0.00024 34.4 0.9 32 283-314 104-141 (216)
14 2hsj_A Putative platelet activ 39.9 12 0.0004 32.9 1.9 15 149-163 34-48 (214)
15 3dci_A Arylesterase; SGNH_hydr 39.5 8.4 0.00029 34.8 0.9 13 150-162 24-36 (232)
16 3dc7_A Putative uncharacterize 36.8 12 0.0004 33.6 1.4 49 369-428 174-224 (232)
17 1fxw_F Alpha2, platelet-activa 34.3 16 0.00054 32.9 1.9 105 283-426 111-215 (229)
18 1vjg_A Putative lipase from th 33.9 12 0.00042 33.1 1.1 15 148-162 19-33 (218)
19 1es9_A PAF-AH, platelet-activa 33.2 17 0.00058 32.6 1.9 105 283-426 110-214 (232)
20 3skv_A SSFX3; jelly roll, GDSL 33.0 1.3E+02 0.0045 29.9 8.7 111 284-428 264-379 (385)
21 1fll_X B-cell surface antigen 33.0 21 0.00073 22.0 1.6 11 401-411 6-16 (26)
22 3bzw_A Putative lipase; protei 31.3 15 0.0005 34.2 1.1 28 284-312 141-168 (274)
23 2vpt_A Lipolytic enzyme; ester 30.5 16 0.00056 32.4 1.3 13 150-162 6-18 (215)
24 2jy0_A Protease NS2-3; membran 30.0 20 0.00067 22.6 1.2 15 21-35 11-25 (27)
25 2wwb_C SEC61BETA, protein tran 27.7 55 0.0019 26.7 3.8 30 7-36 60-89 (96)
26 2w9x_A AXE2A, CJCE2B, putative 26.5 1.8E+02 0.006 28.3 8.2 28 283-311 266-293 (366)
27 2w9x_A AXE2A, CJCE2B, putative 25.8 23 0.00079 34.8 1.5 15 148-162 141-155 (366)
28 2waa_A Acetyl esterase, xylan 25.6 1.5E+02 0.0051 28.6 7.4 28 283-311 245-272 (347)
29 1fxw_F Alpha2, platelet-activa 24.8 3.5E+02 0.012 23.6 11.6 23 141-163 29-53 (229)
30 2waa_A Acetyl esterase, xylan 24.4 21 0.00071 34.9 0.8 14 148-161 131-144 (347)
31 2wao_A Endoglucanase E; plant 23.5 23 0.00078 34.4 1.0 28 283-311 233-260 (341)
32 1vcc_A DNA topoisomerase I; DN 23.1 9.4 0.00032 29.6 -1.5 15 150-164 55-70 (77)
33 1k7c_A Rhamnogalacturonan acet 22.4 25 0.00086 32.0 0.9 29 284-315 108-136 (233)
No 1
>4h08_A Putative hydrolase; GDSL-like lipase/acylhydrolase family protein, structural GE joint center for structural genomics, JCSG; HET: GOL; 1.80A {Bacteroides thetaiotaomicron}
Probab=95.72 E-value=0.0078 Score=54.09 Aligned_cols=51 Identities=20% Similarity=0.196 Sum_probs=36.0
Q ss_pred CccEEEEccccccccceeeeecCeeeeeecccCCCcccchHHHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCC
Q 013284 242 DFDFLIISAGHWFFRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHF 317 (446)
Q Consensus 242 ~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf 317 (446)
.+|+|||+.|..=.. ...+.|+..++++++.++.. .++++|+|-+..|...
T Consensus 74 ~pd~Vvi~~G~ND~~------------------------~~~~~~~~~l~~ii~~l~~~-~p~~~ii~~~~~P~~~ 124 (200)
T 4h08_A 74 KFDVIHFNNGLHGFD------------------------YTEEEYDKSFPKLIKIIRKY-APKAKLIWANTTPVRT 124 (200)
T ss_dssp CCSEEEECCCSSCTT------------------------SCHHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCEE
T ss_pred CCCeEEEEeeeCCCC------------------------CCHHHHHHHHHHHHHHHhhh-CCCccEEEeccCCCcc
Confidence 489999999854100 12467888888888877653 3567889988888654
No 2
>3p94_A GDSL-like lipase; serine hydrolase, catalytic triad, flavodo structural genomics, joint center for structural genomics; HET: MSE PG4; 1.93A {Parabacteroides distasonis}
Probab=92.94 E-value=0.14 Score=45.35 Aligned_cols=31 Identities=3% Similarity=-0.078 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCC
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSH 316 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~H 316 (446)
.+.|+..++.+++.+.. .+.+|++-+..|..
T Consensus 96 ~~~~~~~~~~~i~~~~~---~~~~vil~~~~p~~ 126 (204)
T 3p94_A 96 LENVFGNLVSMAELAKA---NHIKVIFCSVLPAY 126 (204)
T ss_dssp HHHHHHHHHHHHHHHHH---TTCEEEEECCCCCS
T ss_pred HHHHHHHHHHHHHHHHh---CCCeEEEEeCCCCC
Confidence 46778888888777654 36678888887764
No 3
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=79.40 E-value=5.3 Score=34.25 Aligned_cols=29 Identities=17% Similarity=0.111 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCC
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSH 316 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~H 316 (446)
.+.|+..++.+++.+. ..+|++-+..|..
T Consensus 88 ~~~~~~~l~~~i~~~~-----~~~vi~~~~~p~~ 116 (195)
T 1yzf_A 88 VATFRENLETMIHEIG-----SEKVILITPPYAD 116 (195)
T ss_dssp HHHHHHHHHHHHHHHC-----GGGEEEECCCCCC
T ss_pred HHHHHHHHHHHHHHhc-----CCEEEEEcCCCCc
Confidence 4677888888877664 5678887777653
No 4
>4hf7_A Putative acylhydrolase; PF13472 family, structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: OSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=74.03 E-value=1.5 Score=39.43 Aligned_cols=31 Identities=10% Similarity=-0.108 Sum_probs=20.8
Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCC
Q 013284 284 YGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHF 317 (446)
Q Consensus 284 ~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf 317 (446)
+.+...++++++.+.. .+++|++-+..|...
T Consensus 101 ~~~~~~l~~ii~~~~~---~~~~iil~~~~P~~~ 131 (209)
T 4hf7_A 101 DYTFGNIASMAELAKA---NKIKVILTSVLPAAE 131 (209)
T ss_dssp HHHHHHHHHHHHHHHH---TTCEEEEECCCCCSC
T ss_pred HHHHHHHHHhhHHHhc---cCceEEEEeeeccCc
Confidence 4556667776665443 467899999888653
No 5
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=63.43 E-value=49 Score=29.55 Aligned_cols=34 Identities=9% Similarity=-0.058 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHhcCC----CcceEEEEecCCCC
Q 013284 283 FYGYRSAFRTAFKAIYSLEN----YKGITFLRTFAPSH 316 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~----~~t~VffRt~SP~H 316 (446)
.+.|+..++.+++.+..... ++++|++-+..|..
T Consensus 122 ~~~~~~~l~~li~~ir~~~~~~~~p~~~iil~~p~~~~ 159 (232)
T 3dci_A 122 AEAAVSGMRRLAQIVETFIYKPREAVPKLLIVAPPPCV 159 (232)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSSTTCCCEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccCCCCeEEEEeCCCcC
Confidence 46788889998888865421 46777777754443
No 6
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=62.25 E-value=19 Score=31.72 Aligned_cols=29 Identities=14% Similarity=0.000 Sum_probs=20.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCC
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPS 315 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~ 315 (446)
.+.|+..++.+++.+... ++|++-+..|.
T Consensus 112 ~~~~~~~l~~li~~l~~~----~~iil~~~~p~ 140 (218)
T 1vjg_A 112 IAETIKNTREILTQAKKL----YPVLMISPAPY 140 (218)
T ss_dssp HHHHHHHHHHHHHHHHHH----SCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHHh----CcEEEECCCCc
Confidence 466788888888777554 56888777554
No 7
>3hp4_A GDSL-esterase; psychrotrophic, monoethylphosphonate, hydrolase; HET: MIR; 1.35A {Pseudoalteromonas SP} SCOP: c.23.10.0
Probab=60.97 E-value=2.4 Score=36.56 Aligned_cols=46 Identities=11% Similarity=0.028 Sum_probs=29.2
Q ss_pred CccEEEEccccccccceeeeecCeeeeeecccCCCcccchHHHHHHHHHHHHHHHHHhcCCCcceEEEEec
Q 013284 242 DFDFLIISAGHWFFRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITFLRTF 312 (446)
Q Consensus 242 ~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~alrt~~~wl~~~~~~~t~VffRt~ 312 (446)
.+|+||+..|.- +... . ...+.|+..++.+++.+... ..+|++-++
T Consensus 66 ~pd~vvi~~G~N-----D~~~----------------~-~~~~~~~~~~~~~i~~~~~~---~~~vvl~~~ 111 (185)
T 3hp4_A 66 EPTHVLIELGAN-----DGLR----------------G-FPVKKMQTNLTALVKKSQAA---NAMTALMEI 111 (185)
T ss_dssp CCSEEEEECCHH-----HHHT----------------T-CCHHHHHHHHHHHHHHHHHT---TCEEEEECC
T ss_pred CCCEEEEEeecc-----cCCC----------------C-cCHHHHHHHHHHHHHHHHHc---CCeEEEEeC
Confidence 489999999843 1111 0 01467888888888877654 456666554
No 8
>3rjt_A Lipolytic protein G-D-S-L family; PSI-biology, midwest center for structural genomics, MCSG, H; 1.50A {Alicyclobacillus acidocaldarius subsp}
Probab=54.98 E-value=4.4 Score=35.42 Aligned_cols=26 Identities=19% Similarity=0.211 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEe
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRT 311 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt 311 (446)
.+.|+..++.+++.+... +.+|++-+
T Consensus 112 ~~~~~~~l~~~i~~~~~~---~~~vil~~ 137 (216)
T 3rjt_A 112 IDEYRDTLRHLVATTKPR---VREMFLLS 137 (216)
T ss_dssp HHHHHHHHHHHHHHHGGG---SSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHhc---CCeEEEEC
Confidence 577899999998887654 56777765
No 9
>1ivn_A Thioesterase I; hydrolase, protease; 1.90A {Escherichia coli} SCOP: c.23.10.5 PDB: 1u8u_A* 1j00_A* 1jrl_A 1v2g_A*
Probab=49.29 E-value=5.1 Score=34.82 Aligned_cols=27 Identities=7% Similarity=0.086 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEec
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTF 312 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~ 312 (446)
.+.|+..++.+++.+... +.+|++-+.
T Consensus 81 ~~~~~~~l~~li~~~~~~---~~~vil~~~ 107 (190)
T 1ivn_A 81 PQQTEQTLRQILQDVKAA---NAEPLLMQI 107 (190)
T ss_dssp HHHHHHHHHHHHHHHHHT---TCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHc---CCCEEEEec
Confidence 467888888888877654 356776654
No 10
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=47.74 E-value=1.3e+02 Score=25.79 Aligned_cols=34 Identities=6% Similarity=-0.115 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCC
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHF 317 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf 317 (446)
.+.|+..++.+++.+.... +..+|++-+..|...
T Consensus 104 ~~~~~~~l~~~i~~l~~~~-p~~~iil~~~~p~~~ 137 (214)
T 2hsj_A 104 VNEALNNLEAIIQSVARDY-PLTEIKLLSILPVNE 137 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHC-TTCEEEEECCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCeEEEEecCCCCc
Confidence 3667888888888776542 457888888877653
No 11
>1yzf_A Lipase/acylhydrolase; structural GENO PSI, protein structure initiative, midwest center for struc genomics, MCSG; 1.90A {Enterococcus faecalis} SCOP: c.23.10.5
Probab=45.57 E-value=6.4 Score=33.71 Aligned_cols=13 Identities=23% Similarity=0.629 Sum_probs=11.6
Q ss_pred CceEEEechhhHH
Q 013284 150 KSMAFVGDSVARN 162 (446)
Q Consensus 150 K~i~FVGDSl~Rn 162 (446)
++|+|+|||++..
T Consensus 2 ~~i~~~GDS~t~g 14 (195)
T 1yzf_A 2 RKIVLFGDSITAG 14 (195)
T ss_dssp EEEEEEESHHHHC
T ss_pred CeEEEEccccccC
Confidence 5899999999976
No 12
>3mil_A Isoamyl acetate-hydrolyzing esterase; SGNH-hydrolase, hydrolase; 1.60A {Saccharomyces cerevisiae}
Probab=44.47 E-value=5.7 Score=35.47 Aligned_cols=55 Identities=7% Similarity=-0.093 Sum_probs=33.6
Q ss_pred CCccEEEEccccccccceeeeecCeeeeeecccCCCcccchHHHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCC
Q 013284 241 DDFDFLIISAGHWFFRPMVYYENNKIVGCKYCLLDNVTDMKMFYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSH 316 (446)
Q Consensus 241 ~~~DvlV~ntG~Ww~r~~~~~~~g~~vg~~~~~~~~~~~~~~~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~H 316 (446)
..+|+||+..|.-=.. ..+ ... ...+.|+..++.+++.+... +.+|++-+..|..
T Consensus 71 ~~pd~vvi~~G~ND~~-----~~~------------~~~-~~~~~~~~~l~~~i~~~~~~---~~~vil~~~~p~~ 125 (240)
T 3mil_A 71 SNIVMATIFLGANDAC-----SAG------------PQS-VPLPEFIDNIRQMVSLMKSY---HIRPIIIGPGLVD 125 (240)
T ss_dssp CCEEEEEEECCTTTTS-----SSS------------TTC-CCHHHHHHHHHHHHHHHHHT---TCEEEEECCCCCC
T ss_pred CCCCEEEEEeecCcCC-----ccC------------CCC-CCHHHHHHHHHHHHHHHHHc---CCeEEEEcCCCCC
Confidence 3599999998853110 000 011 12467888888888877654 4578887766643
No 13
>2q0q_A ARYL esterase; SGNH hydrolase, oligomeric enzyme, acyl transfer, ARYL ester hydrolase; 1.50A {Mycobacterium smegmatis} PDB: 2q0s_A*
Probab=42.60 E-value=7.1 Score=34.36 Aligned_cols=32 Identities=3% Similarity=-0.032 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHhcCC------CcceEEEEecCC
Q 013284 283 FYGYRSAFRTAFKAIYSLEN------YKGITFLRTFAP 314 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~------~~t~VffRt~SP 314 (446)
.+.|+..++.+++.+..... ++++|++-+..|
T Consensus 104 ~~~~~~~l~~li~~~~~~~~~~~~~~P~~~iil~~~p~ 141 (216)
T 2q0q_A 104 PLDIALGMSVLVTQVLTSAGGVGTTYPAPKVLVVSPPP 141 (216)
T ss_dssp HHHHHHHHHHHHHHHHTCTTTTTBCCCCCEEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCeEEEEeCCC
Confidence 46788888888888765430 346777766543
No 14
>2hsj_A Putative platelet activating factor; structr genomics, structural genomics, PSI-2; HET: MSE; 1.50A {Streptococcus pneumoniae} SCOP: c.23.10.3
Probab=39.85 E-value=12 Score=32.92 Aligned_cols=15 Identities=27% Similarity=0.554 Sum_probs=12.9
Q ss_pred CCceEEEechhhHHH
Q 013284 149 GKSMAFVGDSVARNQ 163 (446)
Q Consensus 149 gK~i~FVGDSl~Rnq 163 (446)
..+|+|+|||++...
T Consensus 34 ~~~i~~~GDSit~g~ 48 (214)
T 2hsj_A 34 EPNILFIGDSIVEYY 48 (214)
T ss_dssp CCSEEEEESHHHHTC
T ss_pred cCCEEEEecchhcCC
Confidence 579999999999753
No 15
>3dci_A Arylesterase; SGNH_hydrolase SUBF structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; HET: MSE; 2.00A {Agrobacterium tumefaciens str}
Probab=39.48 E-value=8.4 Score=34.85 Aligned_cols=13 Identities=31% Similarity=0.452 Sum_probs=11.4
Q ss_pred CceEEEechhhHH
Q 013284 150 KSMAFVGDSVARN 162 (446)
Q Consensus 150 K~i~FVGDSl~Rn 162 (446)
|+|+|+|||++..
T Consensus 24 ~~I~~lGDSit~G 36 (232)
T 3dci_A 24 KTVLAFGDSLTWG 36 (232)
T ss_dssp EEEEEEESHHHHT
T ss_pred CEEEEEECccccC
Confidence 6999999999853
No 16
>3dc7_A Putative uncharacterized protein LP_3323; NESG LPR109 X-RAY LP_3323, structural genomics, PSI-2, prote structure initiative; 2.12A {Lactobacillus plantarum} SCOP: c.23.10.9
Probab=36.80 E-value=12 Score=33.57 Aligned_cols=49 Identities=14% Similarity=0.012 Sum_probs=29.6
Q ss_pred ceEEeeccccccCCCC--CCCCCCCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhcc
Q 013284 369 RFRLLDTTQAMLLRPD--GHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEG 428 (446)
Q Consensus 369 ~v~lLDIT~ls~~R~D--gHps~y~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~~~~ 428 (446)
.+.++|+.......+. .++..| ..|.+|.=--| -..|-+.|+..|..+.
T Consensus 174 ~v~~iD~~~~~~~~~~~~~~~~~~----------~~DgvHpn~~G-~~~iA~~i~~~l~~~~ 224 (232)
T 3dc7_A 174 GVPHLSLYRDAGMTFAIPAQAAIY----------SVDTLHPNNAG-HRVIARKLQSFLDSHF 224 (232)
T ss_dssp TCCEEEHHHHSSCCTTSHHHHHHH----------BSSSSSBCHHH-HHHHHHHHHHHHHHHC
T ss_pred CCcEEecccccCCCccchhhhhhc----------cCCCCCCCHHH-HHHHHHHHHHHHHHHH
Confidence 6889999887654321 122111 36777754433 4577778887776655
No 17
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=34.33 E-value=16 Score=32.89 Aligned_cols=105 Identities=16% Similarity=0.092 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCCCCCCCCCCCCCCccccCCCCCcccCCCcHHHHHHHHHHHHHHHHh
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKE 362 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf~~g~W~~Gg~C~~t~P~~~~e~~~~~~~~~~~~i~~e~~~~~~~~ 362 (446)
.+.|...++.+++.+... .++++|++-+..|.... +. ... ...+++.+++++
T Consensus 111 ~~~~~~~l~~~i~~l~~~-~p~~~iil~~~~p~~~~--------------~~------------~~~-~~~~~~n~~l~~ 162 (229)
T 1fxw_F 111 AEEVAGGIEAIVQLINTR-QPQAKIIVLGLLPRGEK--------------PN------------PLR-QKNAKVNQLLKV 162 (229)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEECCCCCSSS--------------CC------------HHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEeCCCCCCc--------------hh------------hHH-HHHHHHHHHHHH
Confidence 356777888888777543 24577888777665321 10 011 112333444433
Q ss_pred hhccCcceEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHh
Q 013284 363 GQRRGKRFRLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKM 426 (446)
Q Consensus 363 ~~~~~~~v~lLDIT~ls~~R~DgHps~y~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~~ 426 (446)
......++.++|+.....- .++.+.. ....|-+|----| -..|-+.|+..|..
T Consensus 163 ~a~~~~~v~~iD~~~~~~~-~~g~~~~---------~~~~DgvHpn~~G-~~~~a~~l~~~l~~ 215 (229)
T 1fxw_F 163 SLPKLANVQLLDTDGGFVH-SDGAISC---------HDMFDFLHLTGGG-YAKICKPLHELIMQ 215 (229)
T ss_dssp HSSSSSSEEEECCCCSCBC-TTSCBCT---------TTBTTSSSBCHHH-HHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEeCHHHhhc-cCCCcch---------hhcCCCCCcCHHH-HHHHHHHHHHHHHH
Confidence 2223467999999876532 2222111 1235888876544 35666666666654
No 18
>1vjg_A Putative lipase from the G-D-S-L family; structural genomics center for structural genomics, JCSG, protein structure INI PSI, hydrolase; 2.01A {Nostoc SP} SCOP: c.23.10.6 PDB: 1z8h_A
Probab=33.93 E-value=12 Score=33.06 Aligned_cols=15 Identities=33% Similarity=0.541 Sum_probs=13.0
Q ss_pred hCCceEEEechhhHH
Q 013284 148 RGKSMAFVGDSVARN 162 (446)
Q Consensus 148 rgK~i~FVGDSl~Rn 162 (446)
..++|+|+|||++..
T Consensus 19 ~~~~i~~lGDSit~g 33 (218)
T 1vjg_A 19 TQIRICFVGDSFVNG 33 (218)
T ss_dssp EEEEEEEEESHHHHT
T ss_pred CCceEEEEccccccC
Confidence 457999999999975
No 19
>1es9_A PAF-AH, platelet-activating factor acetylhydrolase IB gamma subunit; alpha/beta hydrolase fold; 1.30A {Bos taurus} SCOP: c.23.10.3 PDB: 1wab_A 1fxw_A 1bwr_A 1bwq_A 1bwp_A 3dt9_A* 3dt6_A* 3dt8_A*
Probab=33.16 E-value=17 Score=32.62 Aligned_cols=105 Identities=13% Similarity=0.093 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCCCCCCCCCCCCCCccccCCCCCcccCCCcHHHHHHHHHHHHHHHHh
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKE 362 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf~~g~W~~Gg~C~~t~P~~~~e~~~~~~~~~~~~i~~e~~~~~~~~ 362 (446)
.+.|...++.+++.+... .++++|++-+..|.... |. .+. ...+++.+++++
T Consensus 110 ~~~~~~~l~~~i~~l~~~-~p~~~ii~~~~~p~~~~--------------~~------------~~~-~~~~~~n~~l~~ 161 (232)
T 1es9_A 110 AEQVTGGIKAIVQLVNER-QPQARVVVLGLLPRGQH--------------PN------------PLR-EKNRRVNELVRA 161 (232)
T ss_dssp HHHHHHHHHHHHHHHHHH-STTCEEEEECCCCCSSS--------------CC------------HHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEecCCCCCCC--------------ch------------hHH-HHHHHHHHHHHH
Confidence 466777888887777543 24678888888774321 10 011 112223333332
Q ss_pred hhccCcceEEeeccccccCCCCCCCCCCCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHh
Q 013284 363 GQRRGKRFRLLDTTQAMLLRPDGHPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKM 426 (446)
Q Consensus 363 ~~~~~~~v~lLDIT~ls~~R~DgHps~y~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~~ 426 (446)
......++.++|+.....- .++.+. .....|-+|-=--| -..|-+.|+..|..
T Consensus 162 ~~a~~~~v~~iD~~~~~~~-~~g~~~---------~~~~~Dg~Hpn~~G-~~~~a~~i~~~l~~ 214 (232)
T 1es9_A 162 ALAGHPRAHFLDADPGFVH-SDGTIS---------HHDMYDYLHLSRLG-YTPVCRALHSLLLR 214 (232)
T ss_dssp HHHSCTTEEEECCCCCCSC-TTSCCC---------TTTBTTSSSBCHHH-HHHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEeChHHhcC-CCCCcC---------hhhcCCCCCCCHHH-HHHHHHHHHHHHHH
Confidence 1113467999999876542 122110 01125888865544 35566666666644
No 20
>3skv_A SSFX3; jelly roll, GDSL/SGNH fold, alpha/beta hydrolase fold, trans; 2.49A {Streptomyces SP}
Probab=32.99 E-value=1.3e+02 Score=29.95 Aligned_cols=111 Identities=12% Similarity=0.008 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEecCCCCCCCCCCCCCCCCCccccCCCCCcccCCCcHHHHHHHHHHHHHHHHhh
Q 013284 284 YGYRSAFRTAFKAIYSLENYKGITFLRTFAPSHFENGLWNQGGNCVRTRPFKSNETTLEGDNLELYMIQIEEFKAAEKEG 363 (446)
Q Consensus 284 ~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~Hf~~g~W~~Gg~C~~t~P~~~~e~~~~~~~~~~~~i~~e~~~~~~~~~ 363 (446)
+.|+..++.+++.|+.. .++++|++-+.-|.-..... |-. . +.. ....+++++++.++.
T Consensus 264 ~~~~~~l~~li~~ir~~-~P~a~Illv~p~~~P~~~~~-----------p~~-----~-~~~---l~~~~~~l~~~~~~l 322 (385)
T 3skv_A 264 VDFPANLVGFVQIIRER-HPLTPIVLGSSVYSPFWDEL-----------PAD-----D-KPT---VADYREQVVKVAELL 322 (385)
T ss_dssp TTHHHHHHHHHHHHHTT-CSSSCEEEEECCCCTTTTTS-----------CCT-----T-SCC---HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-CCCCcEEEEcCCCCcccccC-----------Ccc-----c-hhh---HHHHHHHHHHHHHHH
Confidence 45677777777766543 34567777765543221111 100 0 001 111233444444333
Q ss_pred hcc-CcceEEeeccccccCCCCC----CCCCCCCCCCCCCCCCCCcccccCCChhhHHHHHHHHHHHhcc
Q 013284 364 QRR-GKRFRLLDTTQAMLLRPDG----HPSRYGHWPHENVTLYNDCVHWCLPGPIDTWSDFLLEMLKMEG 428 (446)
Q Consensus 364 ~~~-~~~v~lLDIT~ls~~R~Dg----Hps~y~~~~~~~~~~~~DClHWCLPGv~DtWNelL~~~L~~~~ 428 (446)
+.. ..++.++|+..+.. .+. ++. ....|-+|----| -..|-+.|+..|.+.+
T Consensus 323 A~~g~~~v~~vd~~~l~~--~~~~~~~~~~----------l~~~DGlHPn~~G-y~~mA~~l~~~L~~~g 379 (385)
T 3skv_A 323 RKHGDQNVHYLDGMRVWG--PERGMELYLE----------KPDKYPTHPNAVG-HEIFAESSRREMAALG 379 (385)
T ss_dssp HHTTCTTEEEECHHHHSC--TTCCGGGBCS----------CTTSCCCSBCHHH-HHHHHHHHHHHHHHTT
T ss_pred HhcCCCCEEEEecHHHcC--cccccccccc----------cCCCCCCCCCHHH-HHHHHHHHHHHHHHcC
Confidence 333 46899999865432 221 111 1246777754423 4567888887776543
No 21
>1fll_X B-cell surface antigen CD40; TRAF3 with CD40 peptide, TNF signaling, apoptosis; 3.50A {Homo sapiens}
Probab=32.99 E-value=21 Score=22.01 Aligned_cols=11 Identities=18% Similarity=0.256 Sum_probs=9.4
Q ss_pred CCCcccccCCC
Q 013284 401 YNDCVHWCLPG 411 (446)
Q Consensus 401 ~~DClHWCLPG 411 (446)
.+|-+|||+|-
T Consensus 6 vqeTl~~~qPV 16 (26)
T 1fll_X 6 VQETLHGSQPV 16 (26)
T ss_dssp CCCCCCCSSSC
T ss_pred hhHHhhcCccc
Confidence 48999999984
No 22
>3bzw_A Putative lipase; protein structure initiative II, (PSI-II), NYSGXRC, structural genomics; 1.87A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.23.10.9
Probab=31.25 E-value=15 Score=34.24 Aligned_cols=28 Identities=18% Similarity=0.081 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEec
Q 013284 284 YGYRSAFRTAFKAIYSLENYKGITFLRTF 312 (446)
Q Consensus 284 ~Ayr~alrt~~~wl~~~~~~~t~VffRt~ 312 (446)
+.|+..|+.+++.++.. .++++|++-+.
T Consensus 141 ~~~~~~l~~li~~lr~~-~p~a~Iilitp 168 (274)
T 3bzw_A 141 DTYRGRINIGITQLKKL-FPDKQIVLLTP 168 (274)
T ss_dssp SSHHHHHHHHHHHHHHH-CTTSEEEEECC
T ss_pred HHHHHHHHHHHHHHHHH-CCCCeEEEEec
Confidence 35677777777766543 34677888554
No 23
>2vpt_A Lipolytic enzyme; esterase, hydrolase; 1.40A {Clostridium thermocellum}
Probab=30.47 E-value=16 Score=32.37 Aligned_cols=13 Identities=31% Similarity=0.368 Sum_probs=11.3
Q ss_pred CceEEEechhhHH
Q 013284 150 KSMAFVGDSVARN 162 (446)
Q Consensus 150 K~i~FVGDSl~Rn 162 (446)
.+|+|+|||++..
T Consensus 6 ~~i~~~GDSit~G 18 (215)
T 2vpt_A 6 IKIMPVGDSCTEG 18 (215)
T ss_dssp EEEEEEESHHHHT
T ss_pred eEEEecccccccC
Confidence 4899999999974
No 24
>2jy0_A Protease NS2-3; membrane segment, HCV NS2 protein, membrane protein, viral protein; NMR {Synthetic}
Probab=29.96 E-value=20 Score=22.64 Aligned_cols=15 Identities=13% Similarity=0.275 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHh
Q 013284 21 FTITITLIILAIISL 35 (446)
Q Consensus 21 ~~~~~~~~~~~~~~~ 35 (446)
.++++.|.+||+.|.
T Consensus 11 ~~vlv~lti~TLsP~ 25 (27)
T 2jy0_A 11 GAVFVGLVLLTLSPH 25 (27)
T ss_dssp SHHHHHHHHHHHCCC
T ss_pred hHHHHHHHHHhcCcc
Confidence 356677777887664
No 25
>2wwb_C SEC61BETA, protein transport protein SEC61 subunit beta; ribosome, protein EXIT tunnel, cotranslational protein translocation, protein conducting channel; 6.48A {Canis lupus familiaris}
Probab=27.73 E-value=55 Score=26.69 Aligned_cols=30 Identities=10% Similarity=0.036 Sum_probs=21.9
Q ss_pred ccCCCCCCCCcchhHHHHHHHHHHHHHHhc
Q 013284 7 ELHFSQSPRTPKIVFTITITLIILAIISLH 36 (446)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 36 (446)
|....-....|++||++.++|+++.++.+.
T Consensus 60 ~dds~GlKV~P~~VLv~sl~Fi~~Vi~Lhi 89 (96)
T 2wwb_C 60 TEDSPGLKVGPVPVLVMSLLFIASVFMLHI 89 (96)
T ss_dssp -CCSCCCCCSSCSHHHHHHHHHHHHHHHSC
T ss_pred ecCCCceEECCEEehhhHHHHHHHHHHHHH
Confidence 334455778899999998888887776665
No 26
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=26.47 E-value=1.8e+02 Score=28.34 Aligned_cols=28 Identities=18% Similarity=0.153 Sum_probs=19.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEe
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRT 311 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt 311 (446)
.+.|+.+++.+++.++.. .++++|++-+
T Consensus 266 ~~~~~~~l~~li~~ir~~-~p~a~Iil~~ 293 (366)
T 2w9x_A 266 HADYVANYVKFVKQLHSN-NARAQFILMN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEe
Confidence 467888888888887653 2456777665
No 27
>2w9x_A AXE2A, CJCE2B, putative acetyl xylan esterase; carbohydrate esterase family 2, hydrolase; 2.00A {Cellvibrio japonicus}
Probab=25.77 E-value=23 Score=34.83 Aligned_cols=15 Identities=33% Similarity=0.705 Sum_probs=12.5
Q ss_pred hCCceEEEechhhHH
Q 013284 148 RGKSMAFVGDSVARN 162 (446)
Q Consensus 148 rgK~i~FVGDSl~Rn 162 (446)
..++|+|+|||++-.
T Consensus 141 ~~~~I~~iGDSIT~G 155 (366)
T 2w9x_A 141 RKRQIEFIGDSFTVG 155 (366)
T ss_dssp CCCEEEEEESHHHHT
T ss_pred CCceEEEEecccccc
Confidence 468999999999853
No 28
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=25.62 E-value=1.5e+02 Score=28.63 Aligned_cols=28 Identities=7% Similarity=0.112 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEe
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRT 311 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt 311 (446)
.+.|+.+++.+++.+... .++++|++-+
T Consensus 245 ~~~~~~~l~~li~~ir~~-~p~~~I~l~~ 272 (347)
T 2waa_A 245 RATYINTYTRFVRTLLDN-HPQATIVLTE 272 (347)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCEEEEEe
Confidence 356788888888777543 2456777754
No 29
>1fxw_F Alpha2, platelet-activating factor acetylhydrolase IB beta subunit; alpha beta hydrolase fold; 2.10A {Bos taurus} SCOP: c.23.10.3 PDB: 1vyh_A
Probab=24.82 E-value=3.5e+02 Score=23.64 Aligned_cols=23 Identities=26% Similarity=0.434 Sum_probs=16.7
Q ss_pred HHHHHHH--hCCceEEEechhhHHH
Q 013284 141 SQFLEIV--RGKSMAFVGDSVARNQ 163 (446)
Q Consensus 141 ~~fl~~L--rgK~i~FVGDSl~Rnq 163 (446)
..|.+.. ...+|+|+|||++...
T Consensus 29 ~~~~~~~~~~~~~i~~~GDSit~g~ 53 (229)
T 1fxw_F 29 NRFVLDCKDKEPDVLFVGDSMVQLM 53 (229)
T ss_dssp HHHHHHHHHCCCSEEEEESHHHHGG
T ss_pred HHHHHHcccCCCCEEEEecchhcCC
Confidence 4455544 4579999999999764
No 30
>2waa_A Acetyl esterase, xylan esterase, putative, AXE2C; carbohydrate binding, plant cell WALL degradation, hydrolase, cellulases; 1.80A {Cellvibrio japonicus}
Probab=24.38 E-value=21 Score=34.92 Aligned_cols=14 Identities=29% Similarity=0.463 Sum_probs=11.9
Q ss_pred hCCceEEEechhhH
Q 013284 148 RGKSMAFVGDSVAR 161 (446)
Q Consensus 148 rgK~i~FVGDSl~R 161 (446)
..++|+|+|||++.
T Consensus 131 ~~~~I~~iGDSIT~ 144 (347)
T 2waa_A 131 PQRKILVLGDSVTC 144 (347)
T ss_dssp CSEEEEEEESTTTT
T ss_pred CCceEEEeeccccc
Confidence 35799999999984
No 31
>2wao_A Endoglucanase E; plant cell WALL degradation, carbohydrate metabolism, polysaccharide degradation, esterase, hydrolase, cellulases; HET: BGC; 1.80A {Clostridium thermocellum} PDB: 2wab_A*
Probab=23.46 E-value=23 Score=34.35 Aligned_cols=28 Identities=7% Similarity=0.050 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCcceEEEEe
Q 013284 283 FYGYRSAFRTAFKAIYSLENYKGITFLRT 311 (446)
Q Consensus 283 ~~Ayr~alrt~~~wl~~~~~~~t~VffRt 311 (446)
.+.|+.+++.+++.+... .++++|++-+
T Consensus 233 ~~~~~~~l~~li~~ir~~-~p~a~Iil~~ 260 (341)
T 2wao_A 233 KTKFVTAYKNLISEVRRN-YPDAHIFCCV 260 (341)
T ss_dssp HHHHHHHHHHHHHHHHHH-CTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCeEEEEe
Confidence 467788888888777553 2456777766
No 32
>1vcc_A DNA topoisomerase I; DNA binding; HET: DNA; 1.60A {Vaccinia virus} SCOP: d.121.1.1
Probab=23.11 E-value=9.4 Score=29.61 Aligned_cols=15 Identities=47% Similarity=0.713 Sum_probs=11.5
Q ss_pred CceEEEe-chhhHHHH
Q 013284 150 KSMAFVG-DSVARNQM 164 (446)
Q Consensus 150 K~i~FVG-DSl~Rnq~ 164 (446)
.+++||| ||-+|.||
T Consensus 55 ~~lIfvG~DSKgrkQY 70 (77)
T 1vcc_A 55 TRLIFVGSDSKGRRQY 70 (77)
T ss_dssp TSEEEEEECTTSCEEE
T ss_pred CceEEEeecCCCceee
Confidence 6799999 77777654
No 33
>1k7c_A Rhamnogalacturonan acetylesterase; N-linked glycosylation, SGNH-hydrolase, hydrolase; HET: NAG MAN; 1.12A {Aspergillus aculeatus} SCOP: c.23.10.4 PDB: 1dex_A* 1deo_A* 1pp4_A* 3c1u_A*
Probab=22.45 E-value=25 Score=31.96 Aligned_cols=29 Identities=14% Similarity=0.177 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCcceEEEEecCCC
Q 013284 284 YGYRSAFRTAFKAIYSLENYKGITFLRTFAPS 315 (446)
Q Consensus 284 ~Ayr~alrt~~~wl~~~~~~~t~VffRt~SP~ 315 (446)
+.|+..|+.+++.+... +.++++-|..|.
T Consensus 108 ~~~~~~l~~~i~~~~~~---g~~vil~tp~p~ 136 (233)
T 1k7c_A 108 LTFPAYLENAAKLFTAK---GAKVILSSQTPN 136 (233)
T ss_dssp EBHHHHHHHHHHHHHHT---TCEEEEECCCCC
T ss_pred HHHHHHHHHHHHHHHHC---CCEEEEECCCCc
Confidence 45777788877766432 356777666554
Done!