Query 013288
Match_columns 446
No_of_seqs 136 out of 1021
Neff 7.2
Searched_HMMs 29240
Date Mon Mar 25 07:46:11 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/013288.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/013288hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ks8_A Endo-B-1,4-glucanase; c 100.0 1.2E-91 4.1E-96 727.3 25.0 363 1-416 65-431 (433)
2 1ia6_A Cellulase CEL9M; cellul 100.0 2E-90 6.9E-95 719.2 30.0 358 1-418 67-431 (441)
3 2xfg_A Endoglucanase 1; hydrol 100.0 1.3E-90 4.6E-95 723.6 27.9 369 1-418 87-464 (466)
4 1tf4_A T. fusca endo/EXO-cellu 100.0 8.2E-90 2.8E-94 738.5 28.6 366 1-418 66-445 (605)
5 2yik_A Endoglucanase; hydrolas 100.0 3.7E-89 1.3E-93 734.2 24.7 371 1-419 127-518 (611)
6 1g87_A Endocellulase 9G; endog 100.0 2E-88 6.8E-93 728.3 30.3 365 1-419 66-442 (614)
7 1clc_A Endoglucanase CELD; EC: 100.0 5E-79 1.7E-83 659.1 26.3 352 1-417 199-565 (639)
8 3gzk_A Cellulase; fold from GH 100.0 1.3E-78 4.6E-83 644.1 25.0 349 1-418 154-536 (537)
9 1ut9_A Cellulose 1,4-beta-cell 100.0 7.9E-77 2.7E-81 639.8 25.1 377 1-416 187-607 (609)
10 3h7l_A Endoglucanase; dehydrog 100.0 2.1E-49 7.3E-54 419.7 19.4 354 1-416 153-567 (586)
11 2gz6_A N-acetyl-D-glucosamine 96.5 0.059 2E-06 53.7 15.6 146 2-182 52-200 (388)
12 2gz6_A N-acetyl-D-glucosamine 95.7 0.48 1.6E-05 47.0 18.1 115 36-182 21-143 (388)
13 3k7x_A LIN0763 protein; Q92DQ0 94.9 0.23 7.7E-06 49.4 12.5 140 8-182 94-241 (349)
14 3gt5_A N-acetylglucosamine 2-e 92.8 0.54 1.8E-05 47.3 10.8 142 3-182 52-201 (402)
15 3k7x_A LIN0763 protein; Q92DQ0 92.3 1.5 5.2E-05 43.3 13.0 68 97-182 50-120 (349)
16 2ahf_A Unsaturated glucuronyl 91.8 0.93 3.2E-05 45.5 10.8 139 14-182 96-249 (377)
17 3k11_A Putative glycosyl hydro 91.8 1.3 4.5E-05 45.4 12.1 132 8-173 268-417 (445)
18 2zzr_A Unsaturated glucuronyl 90.4 1.2 4.1E-05 45.0 10.1 136 16-182 124-274 (397)
19 3gt5_A N-acetylglucosamine 2-e 89.8 1.4 4.8E-05 44.2 10.2 117 28-182 11-140 (402)
20 1fp3_A N-acyl-D-glucosamine 2- 88.6 2.5 8.6E-05 42.1 11.0 119 28-182 15-150 (402)
21 3pmm_A Putative cytoplasmic pr 82.7 4.9 0.00017 40.1 9.6 91 8-132 235-331 (382)
22 3pmm_A Putative cytoplasmic pr 82.1 7.1 0.00024 38.9 10.5 69 112-182 23-96 (382)
23 1fp3_A N-acyl-D-glucosamine 2- 81.3 2.9 9.9E-05 41.6 7.3 85 90-181 246-341 (402)
24 2zbl_A Putative isomerase; N-a 72.5 14 0.0005 36.9 9.6 144 2-181 50-199 (421)
25 2zbl_A Putative isomerase; N-a 68.5 7.9 0.00027 38.9 6.6 89 90-181 246-343 (421)
26 1nc5_A Hypothetical protein YT 67.5 11 0.00038 37.2 7.4 96 7-132 214-313 (373)
27 1nc5_A Hypothetical protein YT 65.1 8 0.00027 38.2 5.8 61 118-181 107-170 (373)
28 3k11_A Putative glycosyl hydro 61.2 97 0.0033 31.4 13.1 78 96-182 85-173 (445)
29 3e6u_A LANC-like protein 1; al 52.9 75 0.0026 31.6 10.6 116 24-182 248-363 (411)
30 3e6u_A LANC-like protein 1; al 51.7 1.9E+02 0.0065 28.6 13.9 21 158-178 169-189 (411)
31 2p0v_A Hypothetical protein BT 43.7 1.2E+02 0.0041 31.2 10.3 106 18-132 195-318 (489)
32 2zzr_A Unsaturated glucuronyl 38.4 2E+02 0.0067 28.6 10.9 43 4-58 178-221 (397)
33 2ahf_A Unsaturated glucuronyl 35.7 3.1E+02 0.011 26.9 11.8 97 8-132 223-319 (377)
34 1r76_A Pectate lyase; A-helica 35.3 87 0.003 31.4 7.6 83 25-132 170-256 (408)
35 2v8i_A Pectate lyase; periplas 34.8 24 0.00082 36.1 3.3 24 159-182 431-454 (543)
36 2fba_A Glucoamylase Glu1; (alp 28.3 1.6E+02 0.0055 30.1 8.5 94 6-132 148-259 (492)
37 2g0d_A Nisin biosynthesis prot 24.1 4.9E+02 0.017 25.1 11.8 71 96-181 282-352 (409)
No 1
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=100.00 E-value=1.2e-91 Score=727.34 Aligned_cols=363 Identities=37% Similarity=0.625 Sum_probs=324.9
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
||||+++|+|++++|++.|++.|++||||||||||+|||||||+.+ |.||+|||++.. ||.+|++||+++
T Consensus 65 ~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----g~~y~qVgd~~~------Dh~~w~~Pe~~~ 134 (433)
T 1ks8_A 65 MAYTATVLAWGLIDFEAGYSSAGALDDGRKAVKWATDYFIKAHTSQ----NEFYGQVGQGDA------DHAFWGRPEDMT 134 (433)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHTTCHHHHHHHHHHHHHHHHHHCCBT----TBEEEEESCHHH------HHTCCSCGGGCC
T ss_pred hHHHHHHHHHHHHHhHHhhhcCCchHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc------CCcccCCHhhCC
Confidence 6899999999999999999999999999999999999999999999 999999999887 999999999999
Q ss_pred CCCceeeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccc
Q 013288 81 YPRPVQTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYF 156 (446)
Q Consensus 81 ~~R~~~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~ 156 (446)
.+|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ ||+.|.++.+..+++|+|+++.
T Consensus 135 ~~R~~y~~~~~~pgs~~a~~~AAalA~as~vfk~~D~~yA~~~L~~A~~~~~fa~~--~~~~y~~~~~~~~~~Y~ss~~~ 212 (433)
T 1ks8_A 135 MARPAYKIDTSRPGSDLAGETAAALAAASIVFRNVDGTYSNNLLTHARQLFDFANN--YRGKYSDSITDARNFYASADYR 212 (433)
T ss_dssp SCCCEEEECSSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHH--SCCCHHHHSGGGGGTSCCCCTH
T ss_pred CCCceeeccCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH--CCCcccCCCCcCCCCCCCCCcc
Confidence 999999876 999999999999999999999 9999999999999999999999 9999877666667899999999
Q ss_pred hHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccCCCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHHHHHHHHH
Q 013288 157 DEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDMLRMYHNT 236 (446)
Q Consensus 157 De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~~~~~~~~ 236 (446)
||++|||+|||+||||++|+++++++. ..++.......|+|+++..+++++|+++ ... +.+++.
T Consensus 213 DE~~WAAa~Ly~aTgd~~Yl~~~~~~~-----~~~~~~~~~~~~~Wd~~~~g~~~lla~~--~~~---------~~~~~~ 276 (433)
T 1ks8_A 213 DELVWAAAWLYRATNDNTYLNTAESLY-----DEFGLQNWGGGLNWDSKVSGVQVLLAKL--TNK---------QAYKDT 276 (433)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHH-----HHTTGGGSCCCCCSSCCHHHHHHHHHHH--HCC---------HHHHHH
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHH-----HhcCcCcCcCCcCccchhhHHHHHHhhc--cCh---------HHHHHH
Confidence 999999999999999999999998642 2222112245799999999999998872 221 457777
Q ss_pred HHHHHHHHhhcCCccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHHHHHHhcccc
Q 013288 237 TSLTMCSYLEQFHVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRSFATSQIGY 316 (446)
Q Consensus 237 a~~~~~~~~~~~~~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~Y 316 (446)
++.+++.++. .+.+||+|++|...| ||++|++|.+|++++++++. +++.+|+++|++||||
T Consensus 277 ~~~~~~~~~~---~~~~tp~Gl~~~~~W--Gs~~~~~n~a~l~~~~~~~~--------------~~~~~y~~~A~~qldY 337 (433)
T 1ks8_A 277 VQSYVNYLIN---NQQKTPKGLLYIDMW--GTLRHAANAAFIMLEAAELG--------------LSASSYRQFAQTQIDY 337 (433)
T ss_dssp HHHHHHHHHH---TSCBCTTSCBCCCST--THHHHHHHHHHHHHHHHHTT--------------SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHh---cCCcCCCCceeecCC--chhHHHHHHHHHHHHHHhcC--------------CCHHHHHHHHHHhHhh
Confidence 7777777663 457899999998777 99999999999999998751 4678999999999999
Q ss_pred ccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCCCCCccccccccccc
Q 013288 317 ILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDRFDKFNDVRTNHNYT 396 (446)
Q Consensus 317 iLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~~y~~n 396 (446)
|||+| ++|||||||+|+|++||||.++||.. +..|. +.+.+.+.|||++|+|+||||||..|+|+|+|.+|++|
T Consensus 338 iLG~n--~~SyvvG~G~~~p~~pHHR~s~~~~~--~~~c~--~~~~~~~~pn~~~l~GalvGGP~~~d~y~D~~~~y~~n 411 (433)
T 1ks8_A 338 ALGDG--GRSFVCGFGSNPPTRPHHRSSSCPPA--PATCD--WNTFNSPDPNYHVLSGALVGGPDQNDNYVDDRSDYVHN 411 (433)
T ss_dssp HHTTT--SSCCBTTSSSSCCSCCSCHHHHCCCT--TSCCS--HHHHTCSSCCSSCCTTCBCCCCCTTSCCCCCTTCHHHH
T ss_pred ccCCC--CcceEeccCCCCCCCCcchhhcCCCc--ccccc--ccccCCCCCCCCCCccceecCCCcccCcCcCccccccc
Confidence 99998 78999999999999999999999864 34685 44688899999999999999999999999999999999
Q ss_pred cccccCchHHHHHHHHhhcc
Q 013288 397 EPTLAGNAGLVAALASLTTS 416 (446)
Q Consensus 397 EvaId~nA~~v~~la~l~~~ 416 (446)
||||||||+||++||+|...
T Consensus 412 Evai~~NA~~v~~la~l~~~ 431 (433)
T 1ks8_A 412 EVATDYNAGFQSALAALVAL 431 (433)
T ss_dssp CCCHHHHHHHHHHHHHHHHT
T ss_pred cccHHhHHHHHHHHHHHHhc
Confidence 99999999999999999864
No 2
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=100.00 E-value=2e-90 Score=719.24 Aligned_cols=358 Identities=30% Similarity=0.521 Sum_probs=315.2
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
||||+++|+|+++||++.|++.|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+|+
T Consensus 67 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~------Dh~~w~~Pe~~~ 136 (441)
T 1ia6_A 67 QGYSAAILGWSLYEFKESFDATGNTTKMLQQLKYFTDYFLKSHPNS----TTFYYQVGEGNA------DHTYWGAPEEQT 136 (441)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH------HTTCCSCGGGCC
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCcHHHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc------cccccCChhhCC
Confidence 7999999999999999999999999999999999999999999999 999999999888 999999999999
Q ss_pred CCCce-eeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCcc
Q 013288 81 YPRPV-QTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGY 155 (446)
Q Consensus 81 ~~R~~-~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~ 155 (446)
.+|++ |.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ +|+.+. .+++|+|+++
T Consensus 137 ~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vfk~~D~~yA~~~L~~A~~~~~fa~~--~~g~~~-----~~~~Y~ss~~ 209 (441)
T 1ia6_A 137 GQRPSLYKADPSSPASDILSETSAALTLMYLNYKNIDSAYATKCLNAAKELYAMGKA--NQGVGN-----GQSFYQATSF 209 (441)
T ss_dssp SCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--SCSCCC-----CTTTSCCCCS
T ss_pred CCCceeeEeCCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH--cCCCCC-----CCCCCCCCCc
Confidence 99999 8765 899999999999999999999 9999999999999999999999 998542 4689999999
Q ss_pred chHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccC--CCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHHHHHH
Q 013288 156 FDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYR--IPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDMLRMY 233 (446)
Q Consensus 156 ~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~--~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~~~~~ 233 (446)
.||++|||+|||+||||++|+++++++.. +....+. ......|+||++..+++++|++ +..+ ..+
T Consensus 210 ~DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~--~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~--~~~~---------~~~ 276 (441)
T 1ia6_A 210 GDDLAWAATWLYTATNDSTYITDAEQFIT--LGNTMNENKMQDKWTMCWDDMYVPAALRLAQ--ITGK---------QIY 276 (441)
T ss_dssp HHHHHHHHHHHHHHHCCTHHHHHHHHHTT--C------CGGGCSSCSSSSCCHHHHHHHHHH--HHCC---------HHH
T ss_pred hhHHHHHHHHHHHHhCCHHHHHHHHHHHh--hhhhcccccccCCCcCCccchHHHHHHHHHh--ccCc---------HHH
Confidence 99999999999999999999999997642 1111100 0124579999999999998887 3222 345
Q ss_pred HHHHHHHHHHHhhcCCccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHHHHHHhc
Q 013288 234 HNTTSLTMCSYLEQFHVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRSFATSQ 313 (446)
Q Consensus 234 ~~~a~~~~~~~~~~~~~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~q 313 (446)
++.++..++.++ ..+.+||+|+.|...| ||++|++|++|++++|++++ ++++|+++|++|
T Consensus 277 ~~~~~~~~~~~~---~~~~~tp~Gl~~~~~W--Gs~~~~~~~a~l~~~~~~~~---------------~~~~y~~~A~~q 336 (441)
T 1ia6_A 277 KDAIEFNFNYWK---TQVTTTPGGLKWLSNW--GVLRYAAAESMVMLVYCKQN---------------PDQSLLDLAKKQ 336 (441)
T ss_dssp HHHHHHHHHHHH---HTSCBCTTSCBCCCST--THHHHHHHHHHHHHHHHHHS---------------CCHHHHHHHHHH
T ss_pred HHHHHHHHHHHH---hhcccCCCCceecCCc--chHHHHHHHHHHHHHHHhhc---------------CHHHHHHHHHHH
Confidence 666666665544 2578899999998889 99999999999999999863 467999999999
Q ss_pred cccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCCCCCcccccccc
Q 013288 314 IGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDRFDKFNDVRTNH 393 (446)
Q Consensus 314 l~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~~y 393 (446)
||||||+||+++|||||||.|+|++||||+++|+.. .+++.+.||+++|+|+||||||..|+|+|+|.+|
T Consensus 337 ldYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~~~----------~~~~~p~p~~~~l~GalvGGP~~~d~y~D~~~~y 406 (441)
T 1ia6_A 337 VDYILGDNPANMSYIIGYGSNWCIHPHHRAANGYTY----------ANGDNAKPAKHLLTGALVGGPDQNDKFLDDANQY 406 (441)
T ss_dssp HHHHHTCSTTCCCSBTTSSSSCCSCCBCHHHHCCCC----------C--CTTSCCSSCCTTCBCCCCCTTSCCCCSTTCH
T ss_pred HHHhcCCCCCCceeEEecCCCCCCCCcChhhccCCc----------cccCCCCCCcccCccceeeCCCCCcCcCcccccc
Confidence 999999999999999999999999999999987642 1345688899999999999999999999999999
Q ss_pred ccccccccCchHHHHHHHHhhccCC
Q 013288 394 NYTEPTLAGNAGLVAALASLTTSAG 418 (446)
Q Consensus 394 ~~nEvaId~nA~~v~~la~l~~~~~ 418 (446)
++|||||||||+||++||+|....+
T Consensus 407 ~~nEvai~~NA~~v~~la~l~~~~~ 431 (441)
T 1ia6_A 407 QYTEVALDYNAGLVGVLAGAIKFFG 431 (441)
T ss_dssp HHHBCCHHHHHHHHHHHHHHHHHTC
T ss_pred cccccchhhhHHHHHHHHHHHHhcC
Confidence 9999999999999999999998775
No 3
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=100.00 E-value=1.3e-90 Score=723.56 Aligned_cols=369 Identities=33% Similarity=0.532 Sum_probs=316.7
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
||||+++|+|+++||++.|++.|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+|+
T Consensus 87 ~a~t~~~L~w~~~e~~~~~~~~~~~~d~ldeikwg~D~llk~~~~~----~~~y~qVgd~~~------Dh~~W~~pe~~~ 156 (466)
T 2xfg_A 87 MSYSAAMLGWAVYEYEDAFKQSGQYNHILNNIKWACDYFIKCHPEK----DVYYYQVGDGHA------DHAWWGPAEVMP 156 (466)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TEEEEEESCHHH------HHTCCSCGGGCC
T ss_pred cHHHHHHHHHHHHHhHHHHhcCCCchHHHHHHHHHHHHHHHhccCC----CcEEEEeCCCCc------cccccCCcccCC
Confidence 7999999999999999999999999999999999999999999998 999999999877 999999999999
Q ss_pred CCCceeeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCC-Ccc
Q 013288 81 YPRPVQTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNS-SGY 155 (446)
Q Consensus 81 ~~R~~~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s-~~~ 155 (446)
.+|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ +|+.|. .+..+++|+| +++
T Consensus 157 ~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~--~~~~~~--~~~~~~~Y~s~s~~ 232 (466)
T 2xfg_A 157 MERPSYKVDRSSPGSTVVAETSAALAIASIIFKKVDGEYSKECLKHAKELFEFADT--TKSDDG--YTAANGFYNSWSGF 232 (466)
T ss_dssp SCCCEEEEESSSCCHHHHHHHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHHHHHHH--HCCCTT--CCTTTTTSCCSSCS
T ss_pred CCCceeEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHh--cCCcCC--CCccccccCCCCCC
Confidence 889998765 899999999999999999999 9999999999999999999999 999884 3456789999 999
Q ss_pred chHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCcc--ccCCCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHHHHHH
Q 013288 156 FDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKA--FYRIPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDMLRMY 233 (446)
Q Consensus 156 ~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~--~~~~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~~~~~ 233 (446)
.||++|||+|||+||||++|+++++++.. ..... .........|+||++..+++++|++ +...+ . .+
T Consensus 233 ~DEl~WAAawLy~ATgd~~Yl~~a~~~~~-~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~--~~~~~----~----~~ 301 (466)
T 2xfg_A 233 YDELSWAAVWLYLATNDSSYLDKAESYSD-KWGYEPQTNIPKYKWAQCWDDVTYGTYLLLAR--IKNDN----G----KY 301 (466)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHTTT-TSCBSTTSSSBCCSSCCBTTBCHHHHHHHHHH--HHCSS----C----HH
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHHHH-HhccccccccccccCcCCcchhHHHHHHHHHH--hcCCc----H----HH
Confidence 99999999999999999999999997531 00000 0001224579999999999999887 33321 0 23
Q ss_pred HHHHHHHHHHHhhcC--CccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHHHHHH
Q 013288 234 HNTTSLTMCSYLEQF--HVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRSFAT 311 (446)
Q Consensus 234 ~~~a~~~~~~~~~~~--~~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~~a~ 311 (446)
++.++..++.++.+. .++++||+|+.|...| ||++|++|.+||+++|++++ .|+ .+++.+|+++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W--gs~~~~~n~afl~~~y~~~~--------~~~--~~~~~~y~~~A~ 369 (466)
T 2xfg_A 302 KEAIERHLDWWTTGYNGERITYTPKGLAWLDQW--GSLRYATTTAFLACVYSDWE--------NGD--KEKAKTYLEFAR 369 (466)
T ss_dssp HHHHHHHHHHHTTCBTTBCCCBCTTSCBCCCSS--SHHHHHHHHHHHHHHHHTCT--------TSC--HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCCCccccCCccccccCCC--CchHHHHHHHHHHHHHHHhc--------CCC--cccHHHHHHHHH
Confidence 344444444444322 2678999999999999 99999999999999999863 242 234789999999
Q ss_pred hccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCCCCCcccccc
Q 013288 312 SQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDRFDKFNDVRT 391 (446)
Q Consensus 312 ~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~ 391 (446)
+|||||||+| ++|||||||+|+|++||||+++|+.. ..++.+.||+++|+|+||||||..|+|+|+|.
T Consensus 370 ~qidYiLG~N--~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~vl~GaLVGGP~~~D~y~D~~~ 437 (466)
T 2xfg_A 370 SQADYALGST--GRSFVVGFGENPPKRPHHRTAHGSWA----------DSQMEPPEHRHVLYGALVGGPDSTDNYTDDIS 437 (466)
T ss_dssp HHHHHHHTTT--SSCCBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCCCTT
T ss_pred HhHHhhcCCC--CcceEeccCCCCCCCCcCchhccCcc----------ccccCCCCCCCCCccceeeCCCCccCcCcccc
Confidence 9999999999 99999999999999999999987542 13456888999999999999999999999999
Q ss_pred ccccccccccCchHHHHHHHHhhccCC
Q 013288 392 NHNYTEPTLAGNAGLVAALASLTTSAG 418 (446)
Q Consensus 392 ~y~~nEvaId~nA~~v~~la~l~~~~~ 418 (446)
+|++|||||||||+||++||+|....+
T Consensus 438 ~y~~nEvaid~NA~~v~~la~l~~~~g 464 (466)
T 2xfg_A 438 NYTCNEVACDYNAGFVGLLAKMYKLYG 464 (466)
T ss_dssp CHHHHCCCHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccchhhhHHHHHHHHHHHHHcC
Confidence 999999999999999999999988754
No 4
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=100.00 E-value=8.2e-90 Score=738.53 Aligned_cols=366 Identities=36% Similarity=0.581 Sum_probs=325.6
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
||||+++|+|+++||++.|++.|++||||||||||+|||||||+++ +.||+||||+.. ||.+|.+||+|+
T Consensus 66 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~------DH~~w~~pe~m~ 135 (605)
T 1tf4_A 66 MAFTATMLAWGAIESPEGYIRSGQMPYLKDNLRWVNDYFIKAHPSP----NVLYVQVGDGDA------DHKWWGPAEVMP 135 (605)
T ss_dssp HHHHHHHHHHHHHHCHHHHHHTTCHHHHHHHHHHHHHHHHHTCSBT----TBEEEEESCHHH------HHHCCSCGGGCC
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCCcccHHHHHHHHHHHHHHhccCC----CeEEEEeCCCCc------CccccCChhhCC
Confidence 7999999999999999999999999999999999999999999998 999999999877 999999999999
Q ss_pred CCCceeeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCC-Ccc
Q 013288 81 YPRPVQTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNS-SGY 155 (446)
Q Consensus 81 ~~R~~~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s-~~~ 155 (446)
.+|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ +|+.|.++.+ .+++|+| +++
T Consensus 136 ~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~--~~g~y~~~~~-~~~~Y~s~s~~ 212 (605)
T 1tf4_A 136 MERPSFKVDPSCPGSDVAAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADT--YRGVYSDCVP-AGAFYNSWSGY 212 (605)
T ss_dssp SCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--SCCCGGGTST-THHHHCCSSCS
T ss_pred CCCceeEecCCCCcchHHHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHH--cCCCcCCCCC-ccccccCCCCC
Confidence 999999875 899999999999999999999 9999999999999999999999 9999988776 7889999 999
Q ss_pred chHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccC------CCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHH
Q 013288 156 FDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYR------IPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDM 229 (446)
Q Consensus 156 ~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~------~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~ 229 (446)
.||++|||+|||+||||++|+++++++. ..++. ....+.|+||++..+++++|++ +...
T Consensus 213 ~DEl~WAAawLy~ATgd~~Yl~~a~~~~-----~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~--~~~~-------- 277 (605)
T 1tf4_A 213 QDELVWGAYWLYKATGDDSYLAKAEYEY-----DFLSTEQQTDLRSYRWTIAWDDKSYGTYVLLAK--ETGK-------- 277 (605)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHG-----GGSCBCTTSSCBCCSSCCSSSCCHHHHHHHHHH--HHCC--------
T ss_pred chHHHHHHHHHHHHhCCHHHHHHHHHHH-----HhcccccccccccccccccccchHHHHHHHHHh--ccCh--------
Confidence 9999999999999999999999998653 11111 0112579999999999988886 3321
Q ss_pred HHHHHHHHHHHHHHHhhcCC--ccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHH
Q 013288 230 LRMYHNTTSLTMCSYLEQFH--VFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLR 307 (446)
Q Consensus 230 ~~~~~~~a~~~~~~~~~~~~--~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~ 307 (446)
+.|++.++.++|.++.+.. ++++||+|+.|...| ||++|++|.+|++++|++++.. .++..+|+
T Consensus 278 -~~y~~~a~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W--Gs~~~~~n~a~l~~~~a~~~~~-----------~~~~~~y~ 343 (605)
T 1tf4_A 278 -QKYIDDANRWLDYWTVGVNGQRVPYSPGGMAVLDTW--GALRYAANTAFVALVYAKVIDD-----------PVRKQRYH 343 (605)
T ss_dssp -HHHHHHHHHHHHHTTTCBTTBCCCBCTTSCBCCCSS--SHHHHHHHHHHHHHHHHHHCCC-----------HHHHHHHH
T ss_pred -HHHHHHHHHHHHHHhcccCCCccccCCCcceecCCc--cHHHHHHHHHHHHHHHHHhccc-----------cccHHHHH
Confidence 5688999999987764322 578899999998889 9999999999999999987531 13467899
Q ss_pred HHHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCC-CCCc
Q 013288 308 SFATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDR-FDKF 386 (446)
Q Consensus 308 ~~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~-~d~y 386 (446)
++|++|||||||+||+++|||||||+|+|++||||+++|+.. +.++.+.||+++|+|+||||||. .|+|
T Consensus 344 ~~A~~qidYiLG~Np~~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~~~~~vl~GaLVGGP~~~~d~y 413 (605)
T 1tf4_A 344 DFAVRQINYALGDNPRNSSYVVGFGNNPPRNPHHRTAHGSWT----------DSIASPAENRHVLYGALVGGPGSPNDAY 413 (605)
T ss_dssp HHHHHHHHHHHTCSTTCCCSBTTSSSSCCSCCSCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCSSTTCCC
T ss_pred HHHHHHHHHhcCCCCCCcceEecCCCCCCCCCcccccccCcc----------ccccCCccCCCCCcceEEeCCCCCcccc
Confidence 999999999999999999999999999999999999976311 23455778999999999999998 9999
Q ss_pred cccccccccccccccCchHHHHHHHHhhccCC
Q 013288 387 NDVRTNHNYTEPTLAGNAGLVAALASLTTSAG 418 (446)
Q Consensus 387 ~D~~~~y~~nEvaId~nA~~v~~la~l~~~~~ 418 (446)
+|+|.+|++|||||||||+||++||+|....+
T Consensus 414 ~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~~ 445 (605)
T 1tf4_A 414 TDDRQDYVANEVATDYNAGFSSALAMLVEEYG 445 (605)
T ss_dssp CCCTTCTTTTCCCGGGGHHHHHHHHHHHHHHC
T ss_pred cccccchhhcCCccccchHHHHHHHHHHHhcC
Confidence 99999999999999999999999999998874
No 5
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=100.00 E-value=3.7e-89 Score=734.24 Aligned_cols=371 Identities=29% Similarity=0.457 Sum_probs=320.8
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhh-----ccccccccCeEEEEecCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLT-----FNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQR 75 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~-----~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~ 75 (446)
||||+++|+|+++||++.|++.|++||||||||||+|||||| |+.+ |.||+||||+.. ||.+|++
T Consensus 127 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllkmq~~~~~~~~----g~~y~qVgdg~~------Dh~~w~~ 196 (611)
T 2yik_A 127 EAYAASTVGWGYYEFKDQFRATGQAVHAEVILRYFNDYFMRCTFRDASGNV----VAFCHQVGDGDI------DHAFWGA 196 (611)
T ss_dssp HHHHHHHHHHHHHHSHHHHHHTTCHHHHHHHHHHHHHHHHHTEEECTTSCE----EEEEEEESCHHH------HTTCCSC
T ss_pred hHHHHHHHHHHHHHhHHHHhhcCCchhHHHHHHHHHHHHHHcccccccCCC----CcEEEEeCCCCc------cccCCCC
Confidence 699999999999999999999999999999999999999999 6777 999999999888 9999999
Q ss_pred CCCCCCCCceeeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCC
Q 013288 76 PEDMDYPRPVQTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYN 151 (446)
Q Consensus 76 Pe~~~~~R~~~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~ 151 (446)
||+|+++|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ ||+.|.++.+..+++|+
T Consensus 197 Pe~~~~~R~~y~v~~~~pgsd~a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~--~~~~y~~~~~~~~~~Y~ 274 (611)
T 2yik_A 197 PENDTMFRRGWFITKEKPGTDIISATAASLAINYMNFKDTDPQYAAKSLDYAKALFDFAEK--NPKGVVQGEDGPKGYYG 274 (611)
T ss_dssp GGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--SCCCCCCGGGTTTTTSC
T ss_pred hhhCCCCCcceeecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH--cCCcccCCCcccCcCCC
Confidence 99999999998764 899999999999999999999 9999999999999999999999 99999776666789999
Q ss_pred CCccchHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccCCCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHHHH
Q 013288 152 SSGYFDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDMLR 231 (446)
Q Consensus 152 s~~~~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~~~ 231 (446)
|+++.||++|||+|||+||||++|+++++++. ..++ ...+.|+|+++..+++++|+++..... .. ...+.+
T Consensus 275 ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~-----~~~~--~~~~~~~Wd~~~~g~~~lLa~~~~~~~-~~-~~~~~~ 345 (611)
T 2yik_A 275 SSKWQDDYCWAAAWLYLATQNEHYLDEAFKYY-----DYYA--PPGWIHCWNDVWSGTACILAEINDLYD-KD-SQNFED 345 (611)
T ss_dssp CCCSHHHHHHHHHHHHHHHCCHHHHHHHHHHC-----CTTS--TTTSCSBTTBCHHHHHHHHHHHHHHHS-TT-SSHHHH
T ss_pred CCCcccHHHHHHHHHHHHhCCHHHHHHHHHHH-----HHhc--cCCccCccccchHHHHHHHHhcccccc-cc-ccchhH
Confidence 99999999999999999999999999999753 1122 124579999999999998887311100 00 112345
Q ss_pred HHHHHHHHH----------HHHHhhc--CCccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCC
Q 013288 232 MYHNTTSLT----------MCSYLEQ--FHVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPN 299 (446)
Q Consensus 232 ~~~~~a~~~----------~~~~~~~--~~~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~ 299 (446)
.|++.++.. +|..+++ ...+++||+|+.|...| ||++|++|++|++++|++++.
T Consensus 346 ~y~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~tp~Gl~~~~~W--Gs~~~~~~~afl~~~ya~~~~------------ 411 (611)
T 2yik_A 346 RYKRASNKNQWEQIDFWKPIQDLLDKWSGGGITVTPGGYVFLNQW--GSARYNTAAQLIALVYDKHHG------------ 411 (611)
T ss_dssp HHHHHTTCCTTSCCCTTHHHHHHHHHHHTTSSCBCTTSCBCSCST--THHHHHHHHHHHHHHHHHTTT------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccCCCCceeccCCccccccCCC--chHHHHHHHHHHHHHHHHhcC------------
Confidence 666665553 2322211 23678999999998888 999999999999999998642
Q ss_pred CCChHHHHHHHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecC
Q 013288 300 FITLAKLRSFATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAG 379 (446)
Q Consensus 300 ~~~~~~y~~~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGG 379 (446)
....+|+++|++|||||||+||+++|||||||+|+|++||||+++|+.. .+.+.||+++|+|+||||
T Consensus 412 -~~~~~y~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~a~~~~~------------~~~p~p~~~vl~GaLVGG 478 (611)
T 2yik_A 412 -DTPSKYANWARSQMDYLLGKNPLNRCYVVGYSSNSVKYPHHRAASGLKD------------ANDSSPHKYVLYGALVGG 478 (611)
T ss_dssp -SSCCHHHHHHHHHHHHHTTCSTTCCBSBTTSSTTBCCCCBCHHHHCCSC------------TTCCSCCSSCCTTCBCSC
T ss_pred -ccHHHHHHHHHHhHHhhcCCCCCCcceEeccCCCCCCCCcchhhcCccc------------ccCCCCCCCCCCceeecC
Confidence 2356899999999999999999999999999999999999999987632 345788999999999999
Q ss_pred CCCCCCccccccccccccccccCchHHHHHHHHhhccCCC
Q 013288 380 PDRFDKFNDVRTNHNYTEPTLAGNAGLVAALASLTTSAGI 419 (446)
Q Consensus 380 Pn~~d~y~D~~~~y~~nEvaId~nA~~v~~la~l~~~~~~ 419 (446)
||..|+|+|+|.+|++|||||||||+||++||+|....+.
T Consensus 479 Pd~~d~y~D~~~~y~~nEvai~~NA~lv~~la~l~~~~~~ 518 (611)
T 2yik_A 479 PDASDQHVDRTNDYIYNEVAIDYNAAFVGACAGLYRFFGD 518 (611)
T ss_dssp CCTTSCCCCCTTCTTTTBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred CCcccCcCCCCcceeeccceecCccHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999999999999987644
No 6
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=100.00 E-value=2e-88 Score=728.31 Aligned_cols=365 Identities=32% Similarity=0.526 Sum_probs=321.3
Q ss_pred CchhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
||||+++|+|+++||++.|++.|++||||||||||+|||||||+++ +.||+||||+.. ||.+|++||+|+
T Consensus 66 ~a~t~~~L~w~~~e~~~~~~~~g~~~d~ldeikwg~Dyllk~~~~~----~~~y~qVGdg~~------DH~~w~~pe~~~ 135 (614)
T 1g87_A 66 MSYTSAMLAWSLYEDKDAYDKSGQTKYIMDGIKWANDYFIKCNPTP----GVYYYQVGDGGK------DHSWWGPAEVMQ 135 (614)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTCCST----TCEEEEESCHHH------HHTCCSCGGGCC
T ss_pred cHHHHHHHHHHHHHhHHHHhhCCChHHHHHHHHHHHHHHHHhccCC----CcEEEEecCCCc------CccccCCcccCC
Confidence 7999999999999999999999999999999999999999999998 999999999877 999999999999
Q ss_pred CCCceeeCC---CcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccc
Q 013288 81 YPRPVQTIN---AGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYF 156 (446)
Q Consensus 81 ~~R~~~~~~---p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~ 156 (446)
.+|++|.++ |+|++++++|||||+|||||| +||+||++||++||++|+||++ ||+.+. .+..+++|+|+++.
T Consensus 136 ~~r~~y~v~~~~pgsd~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~--~~~~~~--~~~~~~~Y~ss~~~ 211 (614)
T 1g87_A 136 MERPSFKVDASKPGSAVCASTAASLASAAVVFKSSDPTYAEKCISHAKNLFDMADK--AKSDAG--YTAASGYYSSSSFY 211 (614)
T ss_dssp SCCCEEEECSSSCCHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--HCCCTT--CCTTTTTSCCSCSH
T ss_pred CCCcceEecCCCCccHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH--cCCCCC--CCcCcCCcCCCCch
Confidence 999999876 899999999999999999999 9999999999999999999999 999763 34467899999999
Q ss_pred hHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccC------CCCCcccCcCChHHHHHHHHhhhhhccCCCCchHHHH
Q 013288 157 DEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYR------IPEKSVLSWDNKLPAAMLLLTRFRIFLSPGYPYEDML 230 (446)
Q Consensus 157 De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~------~~~~~~~~Wd~~~~~a~~lla~~~~~~~~~~~~~~~~ 230 (446)
||++|||+|||+||||++|+++++++. ..++. ......|+||++..+++++|++ +..+
T Consensus 212 DEl~WAAawLy~ATgd~~Yl~~a~~~~-----~~~~~~~~~~~~~~~~~~~Wd~~~~g~~~lla~--~~~~--------- 275 (614)
T 1g87_A 212 DDLSWAAVWLYLATNDSTYLDKAESYV-----PNWGKEQQTDIIAYKWGQCWDDVHYGAELLLAK--LTNK--------- 275 (614)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHTG-----GGSCBCTTSSSBCCSSCCBTTBCHHHHHHHHHH--HHCC---------
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHH-----HhhccccccccccccCCcCccchHHHHHHHHHh--ccCc---------
Confidence 999999999999999999999999653 11110 1224579999999999999887 3322
Q ss_pred HHHHHHHHHHHHHHhhcC--CccccCCCcceecCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHHH
Q 013288 231 RMYHNTTSLTMCSYLEQF--HVFNWTRGGMVQLNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRS 308 (446)
Q Consensus 231 ~~~~~~a~~~~~~~~~~~--~~~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~ 308 (446)
..|++.++.+++.++++. .++++||+|+.|...| ||+||++|.+||+++|++++ .|+ ..++.+|++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W--gs~~~~~n~afl~~~y~~~~--------~~~--~~~~~~y~~ 343 (614)
T 1g87_A 276 QLYKDSIEMNLDFWTTGVNGTRVSYTPKGLAWLFQW--GSLRHATTQAFLAGVYAEWE--------GCT--PSKVSVYKD 343 (614)
T ss_dssp HHHHHHHHHHHHHHTTCBTTBCCEECTTSCEECCSS--SHHHHHHHHHHHHHHHHHST--------TSC--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccCCCccccCCCCceeccCC--CcHHHHHHHHHHHHHHHHhh--------CCC--ccCHHHHHH
Confidence 357777777777666432 2678899999999999 99999999999999999863 242 234789999
Q ss_pred HHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCCCCCccc
Q 013288 309 FATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDRFDKFND 388 (446)
Q Consensus 309 ~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D 388 (446)
+|++|||||||+| ++|||||||+|+|++||||+++|+.. .+++.+.||+++|+|+||||||..|+|+|
T Consensus 344 ~A~~qidYiLG~n--~~SyvvG~G~~~p~~pHHR~ss~~~~----------~~~~~p~p~~~~l~GaLVGGP~~~D~y~D 411 (614)
T 1g87_A 344 FLKSQIDYALGST--GRSFVVGYGVNPPQHPHHRTAHGSWT----------DQMTSPTYHRHTIYGALVGGPDNADGYTD 411 (614)
T ss_dssp HHHHHHHHHHTTT--SSCCBTTSSSSCCSCCBCHHHHTCSS----------SCTTSSSSCSSCCTTCBCCCCCTTSCCCC
T ss_pred HHHHHHHHhcCCC--CcceEeccCCCCCCCCcchhhccCcc----------ccccCCCCCCCCccccEeeCCCcccCccc
Confidence 9999999999998 88999999999999999999987542 13456888999999999999999999999
Q ss_pred cccccccccccccCchHHHHHHHHhhccCCC
Q 013288 389 VRTNHNYTEPTLAGNAGLVAALASLTTSAGI 419 (446)
Q Consensus 389 ~~~~y~~nEvaId~nA~~v~~la~l~~~~~~ 419 (446)
+|.+|++|||||||||+||++||+|....+.
T Consensus 412 ~~~~y~~nEvai~~NA~lv~~lA~l~~~~~~ 442 (614)
T 1g87_A 412 EINNYVNNEIACDYNAGFTGALAKMYKHSGG 442 (614)
T ss_dssp CTTCHHHHBCCHHHHHHHHHHHHHHHHHHCC
T ss_pred cccchhhcCCccccchHHHHHHHHHHHhcCC
Confidence 9999999999999999999999999988643
No 7
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=100.00 E-value=5e-79 Score=659.10 Aligned_cols=352 Identities=17% Similarity=0.203 Sum_probs=295.4
Q ss_pred CchhHHHHHHHHHHhHHHHHh--------cCChHHHHHHHHHHHHHHHhhcccccccc-CeEEEEecCCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQS--------IGEYDHMRELIKWGTDYLLLTFNSSATKI-DKIYAQVGGSQNGTSEPNDHN 71 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~--------~~~~pdiLde~kwg~D~llk~~~~~~~~~-g~~y~qVgd~~~~~~~~~Dh~ 71 (446)
||||+++|+|++++|++.|++ .|++||||||||||+|||||||..+ . |.+||||||..+ ||.
T Consensus 199 ~a~t~~~L~w~~~~~~~~~~~~~~~ipes~~~~~d~ldeikwg~Dyllk~q~~~---~~g~~y~~vgd~~~------~~~ 269 (639)
T 1clc_A 199 AGITVGSMFLAWEHFKDQLEPVALEIPEKNNSIPDFLDELKYEIDWILTMQYPD---GSGRVAHKVSTRNF------GGF 269 (639)
T ss_dssp HHHHHHHHHHHHHHSHHHHTTCCCSSGGGGSSSCHHHHHHHHHHHHHHTTBCTT---SSCCBEEEEECSSC------CCS
T ss_pred HHHHHHHHHHHHHHhhhhhhccccCCccCCCcHHHHHHHHHHHHHHHHHhcccc---CCCeEEEEecCCCC------CCC
Confidence 799999999999999999988 8999999999999999999998654 2 799999999877 875
Q ss_pred CCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCCCCCCCcc
Q 013288 72 CWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRP-YCRGNPFIEPY 149 (446)
Q Consensus 72 ~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~-y~~~~~~~~g~ 149 (446)
.+||+|+.+|+++. ++|++++++|||||+|||||| +||+||++||+|||++|+||++ ||+. |.++.+..+++
T Consensus 270 --~~Pe~~~~~R~~~~--~~s~~a~e~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~l~~fA~~--~~~~~y~~~~~~~~g~ 343 (639)
T 1clc_A 270 --IMPENEHDERFFVP--WSSAATADFVAMTAMAARIFRPYDPQYAEKCINAAKVSYEFLKN--NPANVFANQSGFSTGE 343 (639)
T ss_dssp --CCGGGCCSCCEEEE--ECHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--CCSCCCCCCTTCCSCC
T ss_pred --CCchhcCCCceEec--CCcHHHHHHHHHHHHHHHhccccCHHHHHHHHHHHHHHHHHHHH--cCCCccCCCccccccc
Confidence 99999999999998 569999999999999999999 9999999999999999999999 9998 56655667889
Q ss_pred CCCCccchHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccCCCCCcccCcCChHHHHHHHHh-hhhhccCCCCchHH
Q 013288 150 YNSSGYFDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDNKLPAAMLLLT-RFRIFLSPGYPYED 228 (446)
Q Consensus 150 Y~s~~~~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~lla-~~~~~~~~~~~~~~ 228 (446)
|+|+++.||++|||+|||+||||++|+++++++. ..++. .....|+|+++..+++++|+ +.....++. ..+.
T Consensus 344 Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~-----~~~~~-~~~~~f~Wd~~~~~~~~~l~~~~~~~~~~~-~~~~ 416 (639)
T 1clc_A 344 YATVSDADDRLWAAAEMWETLGDEEYLRDFENRA-----AQFSK-KIEADFDWDNVANLGMFTYLLSERPGKNPA-LVQS 416 (639)
T ss_dssp CCCSCSHHHHHHHHHHHHHHHCCHHHHHHHHHHH-----HTCSS-SCCSSCCTTCCHHHHHHHHHHCCCSCCCHH-HHHH
T ss_pred cCCCCcchHHHHHHHHHHHHhCCHHHHHHHHHHH-----Hhhcc-ccCCCCCchhhHHHHHHHHHhhhhhccChH-HHHH
Confidence 9999999999999999999999999999998652 11211 11233599999998888776 310111111 1234
Q ss_pred HHHHHHHHHHHHHHHHhhcCCccccCCCccee--cCCCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHH
Q 013288 229 MLRMYHNTTSLTMCSYLEQFHVFNWTRGGMVQ--LNQGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITLAKL 306 (446)
Q Consensus 229 ~~~~~~~~a~~~~~~~~~~~~~~~~tp~G~~~--~~~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y 306 (446)
+++.+++.++.+++.. +.+|+|+.+ ...| |++++++|.||+++++.++ +++.+|
T Consensus 417 ~~~~~~~~a~~~~~~~-------~~~~~g~~~~~~~~W--Gsn~~~~~~a~~~~~a~~l---------------~~~~~~ 472 (639)
T 1clc_A 417 IKDSLLSTADSIVRTS-------QNHGYGRTLGTTYYW--GCNGTVVRQTMILQVANKI---------------SPNNDY 472 (639)
T ss_dssp HHHHHHHHHHHHHHHH-------HTSTTCCTTTTCCCT--THHHHHHHTHHHHHHHHHH---------------SCCHHH
T ss_pred HHHHHHHHHHHHHHhc-------cCCCCCcccCCCCCC--chHHHHHHHHHHHHHHHhc---------------CCHHHH
Confidence 5667777778777542 345666653 4445 8888999999988777654 356899
Q ss_pred HHHHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCC-CCC
Q 013288 307 RSFATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDR-FDK 385 (446)
Q Consensus 307 ~~~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~-~d~ 385 (446)
+++|++|||||||+||+++|||||||.|+|++||||.++++ | .+++++|+||||||. .|+
T Consensus 473 ~~~A~~qidYiLG~NP~~~SyvvG~G~~~p~~pHHR~s~~~----------~---------~~~~~~GalVGGP~~~~d~ 533 (639)
T 1clc_A 473 VNAALDAISHVFGRNYYNRSYVTGLGINPPMNPHDRRSGAD----------G---------IWEPWPGYLVGGGWPGPKD 533 (639)
T ss_dssp HHHHHHHHHHHHTCSTTCCCSBTTSSSSCCSSCBCHHHHHS----------S---------CSSCCSSCBCCCCCSSTTC
T ss_pred HHHHHHHHhhccCCCCCCceEEEecCCCCCCCCcchhhccC----------C---------CCCCCCeeeecCCCccccc
Confidence 99999999999999999999999999999999999976432 1 135699999999999 999
Q ss_pred ccccccccccccccccCchHHHHHHHHhhccC
Q 013288 386 FNDVRTNHNYTEPTLAGNAGLVAALASLTTSA 417 (446)
Q Consensus 386 y~D~~~~y~~nEvaId~nA~~v~~la~l~~~~ 417 (446)
|+|+|.+|++|||+|||||+|+++++++....
T Consensus 534 y~D~r~~y~~nE~~~~~nA~~v~~la~~~~~~ 565 (639)
T 1clc_A 534 WVDIQDSYQTNEIAINWNAALIYALAGFVNYN 565 (639)
T ss_dssp CCCCTTCTTTSBCCHHHHHHHHHHHHTTTTCC
T ss_pred cccCcccceeccccccchHHHHHHHHHhhhcc
Confidence 99999999999999999999999999987653
No 8
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=100.00 E-value=1.3e-78 Score=644.06 Aligned_cols=349 Identities=18% Similarity=0.207 Sum_probs=289.0
Q ss_pred CchhHHHHHHHHHHhHHHHHh-------cCC--hHHHHHHHHHHHHHHHhhcc-ccccccCeEEEEecCCCCCCCCCCCC
Q 013288 1 MSFAMTMLSWSLIEYNHKYQS-------IGE--YDHMRELIKWGTDYLLLTFN-SSATKIDKIYAQVGGSQNGTSEPNDH 70 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~~y~~-------~~~--~pdiLde~kwg~D~llk~~~-~~~~~~g~~y~qVgd~~~~~~~~~Dh 70 (446)
||||+++|+|++++|++.|++ .|+ +||||||||||+|||||||+ ++ |.+|||||+..+ +
T Consensus 154 ~a~t~~~L~~a~~~~~~~~~~~~~i~es~~~~~~~d~ldeikwg~D~llk~~~~~~----g~~y~~v~~~~w-------~ 222 (537)
T 3gzk_A 154 AAKAVADLLLAHEYFPAALAHVRPMRSVHRAPHLPPALEVAREEIAWLLTMQDPAT----GGVYHKVTTPSF-------P 222 (537)
T ss_dssp HHHHHHHHHHHHHHCHHHHHTCCCSGGGSCSSCCCHHHHHHHHHHHHHHHTBCTTT----CCBBSEEECSSC-------C
T ss_pred HHHHHHHHHHHHHHhhhhhhhhhccccccCcccHHHHHHHHHHHHHHHHhcccCCC----CeEEEEecCCCc-------C
Confidence 689999999999999999975 577 99999999999999999998 55 999999997532 1
Q ss_pred CCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCCC-CCCCCCCCc
Q 013288 71 NCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRPY-CRGNPFIEP 148 (446)
Q Consensus 71 ~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~y-~~~~~~~~g 148 (446)
..|.+||+|+.+|+++.++ +..++++|||||+|||||| +||+||++||++||++|+||++ ||+.+ .++.+...+
T Consensus 223 g~~~~Pe~~~~~R~~~~~~--t~~~~~~AAalA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~--~~~~~~~~~~~~~~~ 298 (537)
T 3gzk_A 223 PLDTRPEDDDAPLVLSPIS--YAATATFCAAMAHAALVYRPFDPALSSCCADAARRAYAWLGA--HEMQPFHNPDGILTG 298 (537)
T ss_dssp CTTCCGGGCCSCEEECCBC--HHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHT--SCCCCCCCCTTCCSC
T ss_pred CCCcCcccCCCcceEeecC--CcHHHHHHHHHHHHHHhhcccCHHHHHHHHHHHHHHHHHHHh--cccccccCCcccccC
Confidence 2348999999999999865 7889999999999999999 9999999999999999999999 99975 444555678
Q ss_pred cCCCCccchHHHHHHHHHHHHhCChhhHHHHhhcCCCCCCccccCCCCCcccCcCChHHHHHH--HHhhhhhccCCCCch
Q 013288 149 YYNSSGYFDEYMWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDNKLPAAML--LLTRFRIFLSPGYPY 226 (446)
Q Consensus 149 ~Y~s~~~~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~~~~~a~~--lla~~~~~~~~~~~~ 226 (446)
+|+|+++.||++|||+|||+||||.+|+++++++.. ..+ ...|+||++..++++ ++++ ....+....
T Consensus 299 ~Y~~~~~~Del~wAA~~Ly~aTgd~~Yl~~a~~~~~----~~~-----~~~~~Wd~~~~~~~~~ll~~~--~~~~~~~~~ 367 (537)
T 3gzk_A 299 EYGDAELRDELLWASCALLRMTGDSAWARVCEPLLD----LDL-----PWELGWADVALYGVMDYLRTP--RAAVSDDVR 367 (537)
T ss_dssp CCCCSCCHHHHHHHHHHHHHHHCCGGGHHHHHHHHH----SCC-----CCCCSSSCCHHHHHHHHHTSC--GGGSCHHHH
T ss_pred CcCCCccchHHHHHHHHHHHHhCCHHHHHHHHHhhh----ccC-----CCccchHHhHHHHHHHHHhCc--cccCCHHHH
Confidence 999999999999999999999999999999996531 111 247999999988775 3333 111111112
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCccccCCCcceecC---CCCCChHHHHHHHHHHHHHHHHHHhhCCCCCcccCCCCCCh
Q 013288 227 EDMLRMYHNTTSLTMCSYLEQFHVFNWTRGGMVQLN---QGKPQPLQYVANAAFLASLYVDYLNASGAPGFTCGPNFITL 303 (446)
Q Consensus 227 ~~~~~~~~~~a~~~~~~~~~~~~~~~~tp~G~~~~~---~ww~gn~~~~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~ 303 (446)
+.+++.+++.++.++.. + +.+|+|+.+.. .| ||+++++|.+++++++.++ +++
T Consensus 368 ~~~~~~~~~~ad~~~~~-~------~~~~~g~~~~~~~~~W--Gsn~~~~n~a~~l~~a~~~---------------~~~ 423 (537)
T 3gzk_A 368 NKVKSRLLRELDALAAM-A------ESHPFGIPMRDDDFIW--GSNMVLLNRAMAFLLAEGV---------------GVL 423 (537)
T ss_dssp HHHHHHHHHHHHHHHHH-H------HHSTTCCSCCGGGCCT--THHHHHHHHHHHHHHHGGG---------------TCC
T ss_pred HHHHHHHHHHHHHHHHh-c------cCCCCceeecCCCCcc--cchHHHHHHHHHHHHHhhc---------------cCC
Confidence 45667777788877532 2 34555555532 56 8889999999998887763 244
Q ss_pred HHHHHHH-HhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCCCcccCCCccccCCCCCCCCCccceeecCCCC
Q 013288 304 AKLRSFA-TSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGKKYSCKGGWKWSNNPKPNPHNITGAMVAGPDR 382 (446)
Q Consensus 304 ~~y~~~a-~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~ 382 (446)
.+|+++| ++|||||||+||+++|||||||+|+|++||||.++++. .++++||+||||||.
T Consensus 424 ~~y~~~aa~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~s~~~~-------------------~~~p~~GalVGGPn~ 484 (537)
T 3gzk_A 424 HPAAHTVAQRAADYLFGANPLGQCYVTGFGQRPVRHPHHRPSVADD-------------------VDHPVPGMVVGGPNR 484 (537)
T ss_dssp CTTHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCSCBCHHHHHHC-------------------TTSCCTTCBCCCCCT
T ss_pred HHHHHHHHHHhHHHhcCCCCCCceeEecCCCCCCCCCcchhhhcCC-------------------CCCCCCCCCccCCCc
Confidence 5799999 99999999999999999999999999999999886421 246799999999997
Q ss_pred C----------------CCccccccccccccccccCchHHHHHHHHhhccCC
Q 013288 383 F----------------DKFNDVRTNHNYTEPTLAGNAGLVAALASLTTSAG 418 (446)
Q Consensus 383 ~----------------d~y~D~~~~y~~nEvaId~nA~~v~~la~l~~~~~ 418 (446)
. |+|+|+|.+|++||||||||||||++||+|....+
T Consensus 485 ~~~D~~~~~~~~~~~~~d~y~D~~~~y~~nEvai~~NA~lv~~lA~l~~~~g 536 (537)
T 3gzk_A 485 HLQDEIARAQLAGRPAMEAYIDHQDSYSTNEVAVYWNSPAVFVIAALLEARG 536 (537)
T ss_dssp TCCSHHHHHHCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHSCCC
T ss_pred ccccchhhhcccCCCcccCcCCCCccccccccchHHHHHHHHHHHHHHHhcC
Confidence 6 79999999999999999999999999999987653
No 9
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=100.00 E-value=7.9e-77 Score=639.77 Aligned_cols=377 Identities=18% Similarity=0.162 Sum_probs=300.8
Q ss_pred CchhHHHHHHHHHHhHH-------HH--------HhcCChHHHHHHHHHHHHHHHhhccccccccC---eEEEEecCCCC
Q 013288 1 MSFAMTMLSWSLIEYNH-------KY--------QSIGEYDHMRELIKWGTDYLLLTFNSSATKID---KIYAQVGGSQN 62 (446)
Q Consensus 1 ~a~t~~~L~w~~~~f~~-------~y--------~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g---~~y~qVgd~~~ 62 (446)
||||++.|++.|+.|+. .| ++.|++||||||||||+|||||||..+ + .+|.|||+...
T Consensus 187 ~a~t~~~ll~~ye~~~~~~~~~~~~~~~~~~~iPes~n~~~d~ldeikwg~D~llk~q~~~----g~~~~~~g~v~~~~~ 262 (609)
T 1ut9_A 187 GGIAVWTLMNMYERAKIRGLDNWGPYRDGGMNIPEQNNGYPDILDEARWEIEFFKKMQVTE----KEDPSIAGMVHHKIH 262 (609)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSGGGSTTSSSSTTTTSSSCHHHHHHHHHHHHHHHHBCCT----TTCGGGTTCEECEEE
T ss_pred hHHHHHHHHHHHHHhhhccccchhhhccccccCccccCcHHHHHHHHHHHHHHHHHhccCC----CCcceEEEEecCCCC
Confidence 68999888887888763 23 346889999999999999999999877 5 77788887666
Q ss_pred CCCCCCCCCCC---CCCCCCCCCCceeeCCCcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcCCCCC
Q 013288 63 GTSEPNDHNCW---QRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGGKRRP 138 (446)
Q Consensus 63 ~~~~~~Dh~~W---~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~~p~~ 138 (446)
||..| .+||+|+.+|++.. |+|++++++|||||+|||||| +||+||++||++||++|+||++ +|+.
T Consensus 263 ------D~~w~g~~~~Pe~~~~~R~~~~--p~t~~~~~~AAalAaas~vfk~~d~~ya~~~L~~A~~~~~fa~~--~~~~ 332 (609)
T 1ut9_A 263 ------DFRWTALGMLPHEDPQPRYLRP--VSTAATLNFAATLAQSARLWKDYDPTFAADCLEKAEIAWQAALK--HPDI 332 (609)
T ss_dssp ------ESSCCCSSCCGGGCCSBEEECC--EEHHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHH--CTTC
T ss_pred ------CcccCCCCCChhhCCCceeecC--CCcHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHh--Cccc
Confidence 99666 58999999999865 889999999999999999999 9999999999999999999999 9999
Q ss_pred CCCCC----CCCCccCCCCccchHHHHHHHHHHHHhCChhhHHHHhhcCCC-CCCcccc-------C-CCCCcccCcCCh
Q 013288 139 YCRGN----PFIEPYYNSSGYFDEYMWGAAWLYYATGNVSYLSLATNSGLP-KNSKAFY-------R-IPEKSVLSWDNK 205 (446)
Q Consensus 139 y~~~~----~~~~g~Y~s~~~~De~~wAAaeLy~aTg~~~Y~~~a~~~~~~-~~~~~~~-------~-~~~~~~~~Wd~~ 205 (446)
|.+.. ...+++|+|+++.||++|||+|||+||||++|+++++++... +....++ . ......|+||++
T Consensus 333 y~~~~~~~~~~~~~~Y~ss~~~DEl~WAAawLy~ATgd~~Yl~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~Wd~~ 412 (609)
T 1ut9_A 333 YAEYTPGSGGPGGGPYNDDYVGDEFYWAACELYVTTGKDEYKNYLMNSPHYLEMPAKMGENGGANGEDNGLWGCFTWGTT 412 (609)
T ss_dssp CBCCCCSSSSCBSCCCCBSCCHHHHHHHHHHHHHHHCCHHHHHHHHTSTTTTCCCSBCC----SSGGGTTCBSSCCSSCC
T ss_pred ccccccccCccCCCCCCCCCcccHHHHHHHHHHHHhCCHHHHHHHHHhhhcccchhhhccccccccccccCccccchhhh
Confidence 87653 235789999999999999999999999999999999965310 0000221 0 122357999999
Q ss_pred HHHHHHHHhhhhhccCCCCchHHHHHHHHHHHHHHHHHHhhcCCc-----cccCCCcceecCCCCCChHHHHHHHHHHHH
Q 013288 206 LPAAMLLLTRFRIFLSPGYPYEDMLRMYHNTTSLTMCSYLEQFHV-----FNWTRGGMVQLNQGKPQPLQYVANAAFLAS 280 (446)
Q Consensus 206 ~~~a~~lla~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~-----~~~tp~G~~~~~~ww~gn~~~~~n~a~l~~ 280 (446)
..+++++|+....... +...+..++.++..++.++|.......+ ..+||+|+. | ||++|++|.+|+++
T Consensus 413 ~~~~~~lla~~~~~l~-~~~~~~~~~~~~~~ad~~~~~~~~~~~g~~~~~~~~t~gg~~----W--Gs~~~~~n~a~~~~ 485 (609)
T 1ut9_A 413 QGLGTITLALVENGLP-ATDIQKARNNIAKAADRWLENIEEQGYRLPIKQAEDERGGYP----W--GSNSFILNQMIVMG 485 (609)
T ss_dssp HHHHHHHHHHSCCSSC-HHHHHHHHHHHHHHHHHHHHHHHTCTTCCSCCCCSSSSCSCC----T--THHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcccccc-hhHHHHHHHHHHHHHHHHHHhhccCCCCccccccccCCCCcc----c--ccCHHHHHHHHHHH
Confidence 9999998875211111 0001346778888899999876654322 345677774 5 89999999999988
Q ss_pred HHHHHHhhCCCCCcccCCCCCChHHHHHHHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCC----CCcccC
Q 013288 281 LYVDYLNASGAPGFTCGPNFITLAKLRSFATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDG----KKYSCK 356 (446)
Q Consensus 281 ~y~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~----~~~~~~ 356 (446)
++.++. ++.+|+++|++|||||||+||+++|||||||.|+|++||||+++.+... ...+|.
T Consensus 486 ~a~~~~---------------~~~~y~~~A~~qidYiLG~NP~~~SyVvG~G~~~p~~pHHR~~s~~~~~~~~~~~~G~l 550 (609)
T 1ut9_A 486 YAYDFT---------------GDSKYLDGMFDGISYLLGRNAMDQSYVTGYGERPLQNPHDRFWTPQTSKRFPAPPPGII 550 (609)
T ss_dssp HHHHHH---------------CCTHHHHHHHHHHHHHBTCSTTCCBCBBTCSSSCBCCCBCSSSCTTTCTTSCCCCSSCB
T ss_pred HHHHhc---------------ChHHHHHHHHHHHHhccCCCCCCceEEEecCCCCCCCCccccccccccccCCCCCCCCC
Confidence 777652 4578999999999999999999999999999999999999985542211 124565
Q ss_pred CCccccCCCCCCCCCccceeecCCCCCCCccccccccccccccccCchHHHHHHHHhhcc
Q 013288 357 GGWKWSNNPKPNPHNITGAMVAGPDRFDKFNDVRTNHNYTEPTLAGNAGLVAALASLTTS 416 (446)
Q Consensus 357 ~g~~~~~~~~~~~~~l~GalvGGPn~~d~y~D~~~~y~~nEvaId~nA~~v~~la~l~~~ 416 (446)
.|. .+...+|+++ .|+|||||+..|+|.|+|.+|++|||||||||+||++||+|...
T Consensus 551 ~Gg--p~~~~~dp~~-~ga~vggp~~~d~y~D~r~~y~~nEvaid~NA~lv~~lA~l~~~ 607 (609)
T 1ut9_A 551 SGG--PNSRFEDPTI-NAAVKKDTPPQKCFIDHTDSWSTNEITVNWNAPFAWVTAYLDQY 607 (609)
T ss_dssp CCC--CCTTCCSHHH-HHHSCTTCCGGGCCCCCTTCHHHHBCCHHHHHHHHHHHHHHHHH
T ss_pred CCC--CCCCCCCccc-ccccCCCCccccCcCccccccccccceecchHHHHHHHHHHHhh
Confidence 443 3334455555 89999999999999999999999999999999999999999764
No 10
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=2.1e-49 Score=419.71 Aligned_cols=354 Identities=18% Similarity=0.172 Sum_probs=238.0
Q ss_pred CchhH-------HHHHHHHHHhHHHHHhcC-----ChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCC
Q 013288 1 MSFAM-------TMLSWSLIEYNHKYQSIG-----EYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPN 68 (446)
Q Consensus 1 ~a~t~-------~~L~w~~~~f~~~y~~~~-----~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~ 68 (446)
||||+ ++|+|+++++.+.+.+.. ++||||||||||+|||||||+.+ |.||+||||. + +.
T Consensus 153 ~a~t~~~npqQ~~~~~w~ll~~~~~~~~~~~~~~~~~~~lldE~rWg~D~llkm~~~~----g~~y~qVgd~-W----~~ 223 (586)
T 3h7l_A 153 LSYANYLNPQQTPMVVWNILKGLSLLEGSEDIAAFTRTRLIEEALFGADFLVRMQNEK----GFFYMTVFDK-W----SK 223 (586)
T ss_dssp CGGGSSCCCCCHHHHHHHHHHHHHHSTTSSSSCHHHHHHHHHHHHHHHHHHHHTBCTT----SCBBCEEECT-T----CC
T ss_pred hhhhhhcccchhhHHHHHHHHHHHHhhhhccCcccchHHHHHHHHHHHHHHHhcccCC----CeEEEEecCC-C----CC
Confidence 78998 699999999998887653 27999999999999999999998 9999999984 2 01
Q ss_pred CC--CC---CCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhcccccCCHHH-HHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 013288 69 DH--NC---WQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFKDNTAY-SRKLVKGAKTVFDFAREGGKRRPYCRG 142 (446)
Q Consensus 69 Dh--~~---W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~y-A~~~L~~A~~~y~~a~~~~~p~~y~~~ 142 (446)
|. .. ..+|+.++.+| |.+. .+..++.+|||||+|||||+ |++| +++||++|+++|+|+++ |++.|.++
T Consensus 224 d~~~R~~~~~~~~~~~~~~~--y~~~-~~~~agl~aAALA~Asrvf~-d~~~~a~~~L~aA~~a~~fa~~--~~~~y~~~ 297 (586)
T 3h7l_A 224 DTAQREICAYETQLGHKFDD--YQAG-FRQGGGVAIAALAAASRLGV-HGEYDQQKYRNAAENGYWHLKE--HNTQYLND 297 (586)
T ss_dssp CGGGCEEEEEETTTTEEESC--CBCC-GGGTHHHHHHHHHHHTTSSS-CSSSCHHHHHHHHHHHHHHHHH--HHHHHSTT
T ss_pred CCCccccccccCCCCCCCcc--eecC-CCCcHHHHHHHHHHHhcccC-CCCcChHHHHHHHHHHHHHHHh--cCccccCC
Confidence 10 00 11232222222 3332 23456789999999999998 7788 89999999999999999 98876432
Q ss_pred CCCCCccCCCCccchHH--HHHHHHHHHHhCChhhHHHHhhcCCCCCCccccCCCCCcccCcCC------------hHHH
Q 013288 143 NPFIEPYYNSSGYFDEY--MWGAAWLYYATGNVSYLSLATNSGLPKNSKAFYRIPEKSVLSWDN------------KLPA 208 (446)
Q Consensus 143 ~~~~~g~Y~s~~~~De~--~wAAaeLy~aTg~~~Y~~~a~~~~~~~~~~~~~~~~~~~~~~Wd~------------~~~~ 208 (446)
+++++.||+ +|||+|||+|||+.+||+++...... -...|.. .....|.|.+ ....
T Consensus 298 --------g~~~~~De~~~~WAA~eLy~ATgd~~YL~~a~~~a~~-l~~~~~~-~~~~g~~w~~~d~~~r~~~d~a~~gl 367 (586)
T 3h7l_A 298 --------GEENIIDEYCALLASVELFKATKETRYLEESRLWAQR-LVARQMS-DEQIQHFWSANQDGSRPYFHAAEAGL 367 (586)
T ss_dssp --------SCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH-HHTTEEC-CSSCSSEEBSSSSSSSBCCCTTTTTH
T ss_pred --------CCccchhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH-HHHhccC-CccCCCcCCCcccCCcccccccccHH
Confidence 236789999 99999999999999999999864200 0001110 1123466663 3333
Q ss_pred HHHHHhhh-hhccCCCCchHHHHHHHHHHHHHHHHHHhhc-C------------CccccCCCcceecC---CCCCChHHH
Q 013288 209 AMLLLTRF-RIFLSPGYPYEDMLRMYHNTTSLTMCSYLEQ-F------------HVFNWTRGGMVQLN---QGKPQPLQY 271 (446)
Q Consensus 209 a~~lla~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-~------------~~~~~tp~G~~~~~---~ww~gn~~~ 271 (446)
+.+.|+++ .++.++.. .+.+.+.++..++..+.-.-.. + .....++++++..+ .||-|++++
T Consensus 368 ~~iaLl~l~~~~~d~~~-~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~ 446 (586)
T 3h7l_A 368 PTIALCEYLAIEDDSVQ-TESVKCIVNRACEFEIKISNKVTNPFGYPRQYVKGVNESKRDAFFVAHNNESGYWWQGENAR 446 (586)
T ss_dssp HHHHHHHHHHHCCSTTT-THHHHHHHHHHHHHHHHHHHSSCCSSCCCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHH
T ss_pred HHHHHHHhhhhcCChHH-HHHHHHHHHHHhhhhhhhcccccCccccHHHHhhhhccccccccccccCCCCCCeeeChHHH
Confidence 33333332 13333222 3445566666666433311110 0 11133444455433 578344456
Q ss_pred HHHHHHHHHHHHHHHhhCCCCCcccCCCCCChHHHHHHHHhccccccccCCCCCceEeeeCCCCCCCcccCCCCCCCCCC
Q 013288 272 VANAAFLASLYVDYLNASGAPGFTCGPNFITLAKLRSFATSQIGYILGKNPMKMSYVVGYGKQFPRHVHHRGASIPSDGK 351 (446)
Q Consensus 272 ~~n~a~l~~~y~~~~~~~~~~~~~~~~~~~~~~~y~~~a~~ql~YiLG~Np~g~SyVtG~G~~~p~~pHHR~s~~~~~~~ 351 (446)
++|.|++++++++++... ....+|+++|++|||||||+||+++|||||||+|+|+ ||.+.
T Consensus 447 ~an~a~~~~~a~~~~~~~-----------~~~~~y~~~a~~qldyiLG~Np~~~s~v~G~G~~~p~---~r~~~------ 506 (586)
T 3h7l_A 447 LGSLATMAYLAQPHIASQ-----------EIQQQLSVFAQDALNWIVGLNPYDMCMLDGHGRNNPD---YLPQY------ 506 (586)
T ss_dssp HHHHHHHHHHSGGGCCCH-----------HHHHHHHHHHHHHHHHHBTCSTTCCBCBTTSSSCCCC---SBGGG------
T ss_pred HHHHHHHHHHHHHhcCCc-----------hhHHHHHHHHHHhhhhhccCCCCCCccEEeeCCCCCc---cCccc------
Confidence 999999988887753100 0138899999999999999999999999999999876 78642
Q ss_pred CcccCCCccccCCCCCCCCCccceeecCCCCC--C----------CccccccccccccccccCchHHHHHHHHhhcc
Q 013288 352 KYSCKGGWKWSNNPKPNPHNITGAMVAGPDRF--D----------KFNDVRTNHNYTEPTLAGNAGLVAALASLTTS 416 (446)
Q Consensus 352 ~~~~~~g~~~~~~~~~~~~~l~GalvGGPn~~--d----------~y~D~~~~y~~nEvaId~nA~~v~~la~l~~~ 416 (446)
++ | .+||.|+|||+.. | ...|.-.+|.-+|-.|=--|=|..+++.-.+.
T Consensus 507 ------~~-------~---~~pG~i~gG~~~g~~D~~~ia~~~~~~~~~~~~~wrw~eqw~ph~~w~l~a~~~~~~~ 567 (586)
T 3h7l_A 507 ------GF-------F---NAKGGVCNGITGGFEDEEDIAFNPPAQKDDMLQNWRWGEQWIPHGAWYLLAIMSQAQH 567 (586)
T ss_dssp ------TB-------C---CCTTCBBCCCEECSSCTTSEESSCTTTTTCTTTTHHHHCBBHHHHHHHHHHHHHHHHH
T ss_pred ------CC-------C---CCCccccCCCCCCcCChhhHhcCccccccccccCcccHhhccchHHHHHHHHHHHHHH
Confidence 11 1 2899999999753 2 23355678999998887666666666554443
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.46 E-value=0.059 Score=53.74 Aligned_cols=146 Identities=8% Similarity=0.013 Sum_probs=84.1
Q ss_pred chhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhh-ccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCC
Q 013288 2 SFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLT-FNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMD 80 (446)
Q Consensus 2 a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~-~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~ 80 (446)
.+.-..|+|++.+ .|...-+-|..++.++.+++||++- ++.+ |++|+.+.- |. .|.+.
T Consensus 52 l~~nar~i~~~a~---a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~----Gg~~~~~d~---------dg----~~~~~- 110 (388)
T 2gz6_A 52 IWLQNRQVWTFSM---LCNQLEKRENWLKIARNGAKFLAQHGRDDE----GNWYFALTR---------GG----EPLVQ- 110 (388)
T ss_dssp HHHHHHHHHHHHH---HHHHTCCCHHHHHHHHHHHHHHHHHSBCTT----SCBCSEECT---------TS----CBCCC-
T ss_pred HHHHHHHHHHHHH---HHHHhcCCHHHHHHHHHHHHHHHHhcCCCC----CCEEEEEcC---------CC----CcccC-
Confidence 4555667776654 4544225689999999999999997 4446 889887732 21 12110
Q ss_pred CCCceeeCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcC-CC-CCCCCCCCCCCccCCCCccchH
Q 013288 81 YPRPVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGG-KR-RPYCRGNPFIEPYYNSSGYFDE 158 (446)
Q Consensus 81 ~~R~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~-~p-~~y~~~~~~~~g~Y~s~~~~De 158 (446)
.+.++ .-+-++.+|+.++++.. |+ ++|+.|++++++..+.. .+ +.+....+.. ..+...+..--
T Consensus 111 -~~~~~-------~~af~i~al~~~y~~tg-~~----~~l~~A~~~~~~i~~~~~d~~g~~~~~~~~~-~~~~~~~~~~~ 176 (388)
T 2gz6_A 111 -PYNIF-------SDCFAAMAFSQYALASG-EE----WAKDVAMQAYNNVLRRKDNPKGKYTKTYPGT-RPMKALAVPMI 176 (388)
T ss_dssp -CCCHH-------HHHHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHTC--------------C-CCCEETHHHHH
T ss_pred -CcchH-------HHHHHHHHHHHHHHHhC-CH----HHHHHHHHHHHHHHHHhcCCCcccCcccCCC-CCCCCCCHHHH
Confidence 12222 23456667776666653 44 46888888888888732 11 1111111111 11111111113
Q ss_pred HHHHHHHHHHHhCChhhHHHHhhc
Q 013288 159 YMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 159 ~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
++.|.+.||++|++.+|++.+.+.
T Consensus 177 ~~~all~l~~~t~d~~~~~~A~~~ 200 (388)
T 2gz6_A 177 LANLTLEMEWLLPQETLENVLAAT 200 (388)
T ss_dssp HHHHHHHTGGGSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHH
Confidence 466789999999999999988654
No 12
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=95.73 E-value=0.48 Score=47.02 Aligned_cols=115 Identities=10% Similarity=-0.063 Sum_probs=68.8
Q ss_pred HHHH-HhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhccc-ccCCH
Q 013288 36 TDYL-LLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIV-FKDNT 113 (446)
Q Consensus 36 ~D~l-lk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~v-fk~D~ 113 (446)
+.|. .++++.. |+|++.+.. |.. ..|. + +.....+..+.++|.|+++ ++ +|
T Consensus 21 l~fw~~~~~D~~----GGf~~~~~~---------d~~--~~~~----e-------K~l~~nar~i~~~a~a~~~~~~-~~ 73 (388)
T 2gz6_A 21 LPFWENHSLDSE----GGYFTCLDR---------QGK--VYDT----D-------KFIWLQNRQVWTFSMLCNQLEK-RE 73 (388)
T ss_dssp HHHHHHHCBCTT----SSBCCEEBT---------TSC--EEEC----C-------EEHHHHHHHHHHHHHHHHHTCC-CH
T ss_pred HHHHHhcCCCCC----CCEEeEECC---------CCC--cCCc----c-------hhHHHHHHHHHHHHHHHHHhcC-CH
Confidence 3444 5577664 899888864 321 1121 1 2233467999999999998 54 43
Q ss_pred HHHHHHHHHHHHHHHHHHHcC-C-CCCCCCCCC-CCCccCCCCccc-h--HHHHHHHHHHHHhCChhhHHHHhhc
Q 013288 114 AYSRKLVKGAKTVFDFAREGG-K-RRPYCRGNP-FIEPYYNSSGYF-D--EYMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 114 ~yA~~~L~~A~~~y~~a~~~~-~-p~~y~~~~~-~~~g~Y~s~~~~-D--e~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
.+++.|++..+|..+.. . .|.+....+ .+. .-...... | =+++|.+++|++||+++|++.+.+.
T Consensus 74 ----~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~-~~~~~~~~~~~af~i~al~~~y~~tg~~~~l~~A~~~ 143 (388)
T 2gz6_A 74 ----NWLKIARNGAKFLAQHGRDDEGNWYFALTRGGE-PLVQPYNIFSDCFAAMAFSQYALASGEEWAKDVAMQA 143 (388)
T ss_dssp ----HHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSC-BCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCC-cccCCcchHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 47888999999998831 1 122211110 010 00011111 1 2457888999999999999988754
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=94.94 E-value=0.23 Score=49.39 Aligned_cols=140 Identities=13% Similarity=0.054 Sum_probs=82.6
Q ss_pred HHHHHHHhHHHHHhcCChHHHHHHHHHHHHHH-HhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCcee
Q 013288 8 LSWSLIEYNHKYQSIGEYDHMRELIKWGTDYL-LLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQ 86 (446)
Q Consensus 8 L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~l-lk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~ 86 (446)
++|-.+.+-+.|+.. +-+..|+.++-..++| .+-.++..+ |+|+-++ + +..|
T Consensus 94 ~a~~~la~~~aye~t-~~~~yL~~A~~l~~~l~~~~wd~~~g--GGi~W~~------------------~------~~~~ 146 (349)
T 3k7x_A 94 MLWNALAAYRLYKAT-GKSIYLEDAQLVWQDLVDTGWNDIMG--GGFAWRR------------------P------QMYY 146 (349)
T ss_dssp HHHHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHTBCSGGG--SCBEEET------------------T------EEEE
T ss_pred HHHHHHHHHHHHHHH-CCchHHHHHHHHHHHHHHhCCCCCCC--CceEecC------------------C------Cccc
Confidence 455556667777766 5588999999999998 555543211 4444332 1 1123
Q ss_pred eCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcC-CC-CCCCCCCCCCCccCCC--Cccc---hHH
Q 013288 87 TINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGG-KR-RPYCRGNPFIEPYYNS--SGYF---DEY 159 (446)
Q Consensus 87 ~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~-~p-~~y~~~~~~~~g~Y~s--~~~~---De~ 159 (446)
+ .+-..+.++.++|..++++. |+ ++|+.|+++|+|.++.. .+ +.+.++.......+.+ ..|. --+
T Consensus 147 k---naisN~~~~~~la~l~~~tg-d~----~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~ 218 (349)
T 3k7x_A 147 K---NTPVNAPFIILSCWLYNELN-ET----KYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVY 218 (349)
T ss_dssp E---EHHHHHHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHH
T ss_pred c---chhhHHHHHHHHHHHHHHhC-CH----HHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeeeHHHHHH
Confidence 3 12234455556655555553 43 58899999999998731 12 2232322110111111 1222 247
Q ss_pred HHHHHHHHHHhCChhhHHHHhhc
Q 013288 160 MWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 160 ~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
+.++++||++||+++|++.+.+.
T Consensus 219 l~g~~~LY~~T~d~~yl~~a~~l 241 (349)
T 3k7x_A 219 IGANLELYRITKEAIYLDTANKT 241 (349)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcHHHHHHHHHH
Confidence 88999999999999999998864
No 14
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=92.83 E-value=0.54 Score=47.32 Aligned_cols=142 Identities=14% Similarity=0.048 Sum_probs=76.2
Q ss_pred hhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 013288 3 FAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYP 82 (446)
Q Consensus 3 ~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~ 82 (446)
+.-..++|++.+ +|... +.|+.|+.++.+++||++-..++. .|++|+.+-++ .|.+ ..
T Consensus 52 ~~n~r~i~~~a~---a~~~~-g~~~~l~~A~~~~~fl~~~~~d~~--~Gg~~~~~~dG--------------~~~~--~~ 109 (402)
T 3gt5_A 52 VSSTRFVFNYAM---AYLQF-GTAEYLDAVHHGLSYVRDVHRNPA--TGGYAWTLCDD--------------RVED--DT 109 (402)
T ss_dssp HHHHHHHHHHHH---HHHHH-CCHHHHHHHHHHHHHHHHTTBCTT--TSCBCSEEETT--------------EEEE--CC
T ss_pred HHHHHHHHHHHH---HHHhh-CChHHHHHHHHHHHHHHHhCccCC--CCcEEEEeeCC--------------CCCc--CC
Confidence 344556665443 44333 569999999999999998533220 16777777221 1110 01
Q ss_pred CceeeCCCcchHHHHHHHHHHHhccccc-CCHHHHHHHHHHHHHHHHHHHHcC-CC--CCCCCCC-CCC-CccCCCCccc
Q 013288 83 RPVQTINAGPDLAGEMAAALAAASIVFK-DNTAYSRKLVKGAKTVFDFAREGG-KR--RPYCRGN-PFI-EPYYNSSGYF 156 (446)
Q Consensus 83 R~~~~~~p~sd~t~~~AAaLA~As~vfk-~D~~yA~~~L~~A~~~y~~a~~~~-~p--~~y~~~~-~~~-~g~Y~s~~~~ 156 (446)
+.+| ..+-+++|++. ..+ .|+. .|+.|+++++..++.+ .| |-|.+.. +.. ...|.+ -+
T Consensus 110 ~~ly---------d~Af~i~al~~-~~~tgd~~----~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~~~~~~~--~n 173 (402)
T 3gt5_A 110 NHCY---------GLAFVMLAYSC-GLKVGIKQ----AREWMDETWCLLERHFWDAEYGLYKDEADAQWNFTRYRG--QN 173 (402)
T ss_dssp EEHH---------HHHHHHHHHHH-HHHTTCTT----HHHHHHHHHHHHHHHTEETTTTEECCEECTTCCBCSCEE--HH
T ss_pred cchH---------HHHHHHHHHHH-HHHhCChh----HHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCCCCCCCC--CC
Confidence 2222 12223333333 222 4543 6778888888888732 11 2222110 000 011111 12
Q ss_pred hH--HHHHHHHHHHHhCChhhHHHHhhc
Q 013288 157 DE--YMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 157 De--~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
+- ++-|.+.||++||++.|++.+.+.
T Consensus 174 ~~m~l~eall~L~~~tgd~~~~~~a~~l 201 (402)
T 3gt5_A 174 ANMHMCEAMLAAYEASGEQRYLERALVL 201 (402)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 22 456799999999999999988654
No 15
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=92.26 E-value=1.5 Score=43.32 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=45.6
Q ss_pred HHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccchHHHH---HHHHHHHHhCCh
Q 013288 97 EMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYFDEYMW---GAAWLYYATGNV 173 (446)
Q Consensus 97 ~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~De~~w---AAaeLy~aTg~~ 173 (446)
.+-.+|.-++++.. |+ ++++.|++...+.... +.+.+ . .++.||..| |.+.+|++||++
T Consensus 50 ~~~~~l~d~~~~tg-d~----~y~~~a~~~~~~~~~~-~~~~~-----------~-~~~~DD~a~~~la~~~aye~t~~~ 111 (349)
T 3k7x_A 50 HLVEVRLDAYLRTK-KQ----ADLEVAEKTYLHNKNR-NGGTL-----------I-HDFYDDMLWNALAAYRLYKATGKS 111 (349)
T ss_dssp HHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHHH-TTSSS-----------C-CSBHHHHHHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHHHHhC-CH----HHHHHHHHHHHHHHhc-CCCCC-----------C-ccCccHHHHHHHHHHHHHHHHCCc
Confidence 34588888877764 44 4677777777776661 21111 1 234566654 899999999999
Q ss_pred hhHHHHhhc
Q 013288 174 SYLSLATNS 182 (446)
Q Consensus 174 ~Y~~~a~~~ 182 (446)
+||+.+++.
T Consensus 112 ~yL~~A~~l 120 (349)
T 3k7x_A 112 IYLEDAQLV 120 (349)
T ss_dssp HHHHHHHHH
T ss_pred hHHHHHHHH
Confidence 999988743
No 16
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=91.77 E-value=0.93 Score=45.47 Aligned_cols=139 Identities=17% Similarity=0.057 Sum_probs=78.2
Q ss_pred HhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcch
Q 013288 14 EYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPD 93 (446)
Q Consensus 14 ~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd 93 (446)
.+...|+-++ -+..++.+.=.+++|+.-.+.. +++....+.. +.|+ ...+ ..|+
T Consensus 96 s~~~~y~ltg-~~~~~~~~~~aA~~L~~r~~~~----~g~i~sw~~~-------------~~~~---~~~~-~iID---- 149 (377)
T 2ahf_A 96 SAKAQWIVEK-DESARKLALDAADVLMRRWRAD----AGIIQAWGPK-------------GDPE---NGGR-IIID---- 149 (377)
T ss_dssp THHHHHHHHC-CHHHHHHHHHHHHHHHTTEETT----TTEECCBSST-------------TCTT---TTTE-EEGG----
T ss_pred HHHHHHHHhC-CHHHHHHHHHHHHHHHHhCCCC----CCeEEeccCC-------------CCCC---CCce-EEec----
Confidence 4455565544 3688999999999999887655 4444332210 1122 1112 2333
Q ss_pred HHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCC-CCCCCccC----CCCccchH---------
Q 013288 94 LAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKRRP-YCRG-NPFIEPYY----NSSGYFDE--------- 158 (446)
Q Consensus 94 ~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~-y~~~-~~~~~g~Y----~s~~~~De--------- 158 (446)
+.+...+|+-|++++. ||.|.+...+||+.+-+.... ..+. +... .+...|.- .-.++.|+
T Consensus 150 -~mmni~~L~~A~~~~g-d~~y~~~A~~~a~~~l~~~~r--~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw 225 (377)
T 2ahf_A 150 -CLLNLPLLLWAGEQTG-DPEYRRVAEAHALKSRRFLVR--GDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAW 225 (377)
T ss_dssp -GGGGHHHHHHHHHHHC-CTHHHHHHHHHHHHHHHHTBB--TTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHH
T ss_pred -hHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCcC--CCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHH
Confidence 3456889999999985 566655555555555444322 1111 1100 00001111 11234444
Q ss_pred HHHHHHHHHHHhCChhhHHHHhhc
Q 013288 159 YMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 159 ~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
.+++-++||++|++.+||+.+++.
T Consensus 226 ~i~gl~~ly~~T~d~~yL~~A~~l 249 (377)
T 2ahf_A 226 GIYGFALNSRYLGNADLLETAKRM 249 (377)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCChHHHHHHHHH
Confidence 467899999999999999999853
No 17
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.76 E-value=1.3 Score=45.36 Aligned_cols=132 Identities=8% Similarity=-0.009 Sum_probs=87.0
Q ss_pred HHHHHHHhHHHHHh----cCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCC
Q 013288 8 LSWSLIEYNHKYQS----IGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPR 83 (446)
Q Consensus 8 L~w~~~~f~~~y~~----~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R 83 (446)
.+|..+-+.+.++. ..+.+.+++.++=-++.|++.|+++ | ++++|=| + |+
T Consensus 268 nGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~~~----G-~W~~vld---------~------~~------ 321 (445)
T 3k11_A 268 NGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQSGE----G-FWHQLLD---------C------ND------ 321 (445)
T ss_dssp HHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCCTT----S-CEESBTT---------C------TT------
T ss_pred chHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCCCC----C-chhhccC---------C------CC------
Confidence 57888888888874 2467899999999999999999764 4 7777643 1 11
Q ss_pred ceeeCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcCCC-CCCCCCCCCCC------ccCCCCc--
Q 013288 84 PVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKR-RPYCRGNPFIE------PYYNSSG-- 154 (446)
Q Consensus 84 ~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p-~~y~~~~~~~~------g~Y~s~~-- 154 (446)
.| +-|+.++++|.+|+-+.+.--.| +++++..|+++|+-....-++ |... ++-.++ .+|.+..
T Consensus 322 -~y---~EsSaTAmfaygllkgvr~G~Ld---~~~Y~~~A~ka~~~L~~~i~~dG~l~-~v~~gtg~g~d~~~Y~~~p~~ 393 (445)
T 3k11_A 322 -SY---LETSATAIYVYCLAHAINKGWID---AIAYGPVAQLGWHAVAGKINEEGQVE-GTCVGTGMAFDPAFYYYRPVN 393 (445)
T ss_dssp -SC---EEHHHHHHHHHHHHHHHHHTSSC---HHHHHHHHHHHHHHHHTTBCTTSCBC-SCBCCCCCCSSHHHHHTCCBC
T ss_pred -CC---CCccHHHHHHHHHHHHHHcCCCC---HHHHHHHHHHHHHHHHHhCCCCCCEe-ceeeccCCCCCchhhccCccc
Confidence 12 23777899999999987742245 357899999999999873222 2211 111111 1232211
Q ss_pred c-----chHHHHHHHHHHHHhCCh
Q 013288 155 Y-----FDEYMWGAAWLYYATGNV 173 (446)
Q Consensus 155 ~-----~De~~wAAaeLy~aTg~~ 173 (446)
. .-.++||++|+.+..+..
T Consensus 394 ~~d~~G~G~fllA~~E~~~l~~~~ 417 (445)
T 3k11_A 394 VYAAHGYGPVLWAGAEMIRLLNTQ 417 (445)
T ss_dssp TTCGGGHHHHHHHHHHHHHHHHHS
T ss_pred CCCCccHHHHHHHHHHHHHHhccC
Confidence 1 125899999999986543
No 18
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=90.41 E-value=1.2 Score=44.99 Aligned_cols=136 Identities=13% Similarity=0.023 Sum_probs=77.7
Q ss_pred HHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHH
Q 013288 16 NHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLA 95 (446)
Q Consensus 16 ~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t 95 (446)
...|+-+ +-+..++.+.-.+++|+.-.+.. +++....+.. +.|+ +.++ .|+ +
T Consensus 124 ~~~y~lt-g~~~~~~~~~~aA~~L~~r~~~~----~g~iqsw~~~-------------~~~~----~~~~-iID-----~ 175 (397)
T 2zzr_A 124 TAEYRIN-GDVKALEATIKAADKLMERYQEK----GGFIQAWGEL-------------GYKE----HYRL-IID-----C 175 (397)
T ss_dssp HHHHHHH-CCHHHHHHHHHHHHHHHTTEETT----TTEECCSSST-------------TCGG----GCEE-ETT-----H
T ss_pred HHHHHHh-CCHHHHHHHHHHHHHHHHHhCcC----CCEEEecccC-------------CCCC----CCce-eec-----h
Confidence 3344433 45779999999999998877554 4444333211 1111 1222 334 4
Q ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcCCCCC-CCCC-CCCCCc-cC---CCCccchH---------HH
Q 013288 96 GEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKRRP-YCRG-NPFIEP-YY---NSSGYFDE---------YM 160 (446)
Q Consensus 96 ~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~-y~~~-~~~~~g-~Y---~s~~~~De---------~~ 160 (446)
.+...+|+-|++++. ||.|.+...+||+..-+.... ..+. |..- .+...| .. .-.++.|| .+
T Consensus 176 ~mni~~L~~A~~~~g-d~~y~~~A~~ha~~~l~~~~r--~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i 252 (397)
T 2zzr_A 176 LLNIQLLFFAYEQTG-DEKYRQVAVNHFYASANNVVR--DDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGI 252 (397)
T ss_dssp HHHTHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHTBC--TTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHH
T ss_pred HhHHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHhCcC--CCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHH
Confidence 567889999999884 677666666665555544422 1111 1110 000011 10 11233444 46
Q ss_pred HHHHHHHHHhCChhhHHHHhhc
Q 013288 161 WGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 161 wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
+|.++||++|+|.+||+.+++.
T Consensus 253 ~gl~~lY~~T~d~~yL~~A~~l 274 (397)
T 2zzr_A 253 YGIPLSYRKMKDYQQIILFKGM 274 (397)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHH
Confidence 7899999999999999998753
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=89.81 E-value=1.4 Score=44.19 Aligned_cols=117 Identities=9% Similarity=0.030 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHH-hhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhc
Q 013288 28 MRELIKWGTDYLL-LTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAAS 106 (446)
Q Consensus 28 iLde~kwg~D~ll-k~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As 106 (446)
+.+|+.--+.|.+ ++.+.. |+||..++. |.. ..|+ .. +..-..+.++.++|.|+
T Consensus 11 l~~~~~~~l~fw~~~~~D~~----GGf~~~l~~---------dg~--~~~~--------~~--k~l~~n~r~i~~~a~a~ 65 (402)
T 3gt5_A 11 LRTHISDTMAFYHPRCIDSA----GGFFHYFRD---------DGS--IYNA--------TH--RHLVSSTRFVFNYAMAY 65 (402)
T ss_dssp HHHHHHHHHHHHTTTTBCTT----SSBCCEECT---------TSC--EEES--------SE--EEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCC----cCeeeEECC---------CCC--CCCC--------Cc--hhHHHHHHHHHHHHHHH
Confidence 5678888888875 677754 899988854 311 0011 11 22445789999999999
Q ss_pred ccccCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCC---------CccchH---HHHHHHHHHHHhCChh
Q 013288 107 IVFKDNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNS---------SGYFDE---YMWGAAWLYYATGNVS 174 (446)
Q Consensus 107 ~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s---------~~~~De---~~wAAaeLy~aTg~~~ 174 (446)
++++ + ..+|+.|++.++|..+ +- +.. ..+++|-+ ....++ +++|.++ |.+||+..
T Consensus 66 ~~~g-~----~~~l~~A~~~~~fl~~--~~--~d~---~~Gg~~~~~~dG~~~~~~~~lyd~Af~i~al~~-~~~tgd~~ 132 (402)
T 3gt5_A 66 LQFG-T----AEYLDAVHHGLSYVRD--VH--RNP---ATGGYAWTLCDDRVEDDTNHCYGLAFVMLAYSC-GLKVGIKQ 132 (402)
T ss_dssp HHHC-C----HHHHHHHHHHHHHHHH--TT--BCT---TTSCBCSEEETTEEEECCEEHHHHHHHHHHHHH-HHHTTCTT
T ss_pred HhhC-C----hHHHHHHHHHHHHHHH--hC--ccC---CCCcEEEEeeCCCCCcCCcchHHHHHHHHHHHH-HHHhCChh
Confidence 9885 3 3478999999999988 31 110 01222211 111222 3578889 88899999
Q ss_pred hHHHHhhc
Q 013288 175 YLSLATNS 182 (446)
Q Consensus 175 Y~~~a~~~ 182 (446)
|++.+.+.
T Consensus 133 ~l~~A~~l 140 (402)
T 3gt5_A 133 AREWMDET 140 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99988754
No 20
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=88.60 E-value=2.5 Score=42.06 Aligned_cols=119 Identities=15% Similarity=0.070 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHH-hhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhc
Q 013288 28 MRELIKWGTDYLL-LTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAAS 106 (446)
Q Consensus 28 iLde~kwg~D~ll-k~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As 106 (446)
+.+|+.-.+.+++ ++++... |+|+..+.. |.. |-. .++ .....+.+..++|.|+
T Consensus 15 l~~~~~~~l~~w~~~~~D~~~---GGf~~~~~~---------dg~----~~~--~~k-------~l~~nar~l~~~a~a~ 69 (402)
T 1fp3_A 15 VGQELDRVMAFWLEHSHDREH---GGFFTCLGR---------DGR----VYD--DLK-------YVWLQGRQVWMYCRLY 69 (402)
T ss_dssp HHHHHHHHHHHHHHHSBCTTT---SSBCCCBCT---------TSC----BSC--CCE-------EHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhccCCCCCC---CCEeeEECC---------CCC----CCC--Ccc-------chhhhHHHHHHHHHHH
Confidence 4455566777887 6776542 788877764 321 110 111 2334678899999999
Q ss_pred ccc--cCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCC-ccCCCC----------c-cch--HHHHHHHHHHHHh
Q 013288 107 IVF--KDNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIE-PYYNSS----------G-YFD--EYMWGAAWLYYAT 170 (446)
Q Consensus 107 ~vf--k~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~-g~Y~s~----------~-~~D--e~~wAAaeLy~aT 170 (446)
+++ .-++ ++|+.|++..+|..+.. +.. .++ ++|.+. . ..| -+++|.++||++|
T Consensus 70 ~~~~~~~~~----~~l~~A~~~~~fl~~~~----~d~---~gg~g~~~s~d~dg~~~~~~~~lyd~af~~~a~~~~~~at 138 (402)
T 1fp3_A 70 RKLERFHRP----ELLDAAKAGGEFLLRHA----RVA---PPEKKCAFVLTRDGRPVKVQRSIFSECFYTMAMNELWRVT 138 (402)
T ss_dssp HHCGGGCCH----HHHHHHHHHHHHHHHHT----BSS---TTSCCBCSEECTTSCEEECCSSSHHHHHHHHHHHHHHHHH
T ss_pred HHhcccCCH----HHHHHHHHHHHHHHHhc----cCc---CCCCceEEEECCCCCccccccchHHHHHHHHHHHHHHHHh
Confidence 988 2344 57889999999998832 110 111 333220 0 112 4578999999999
Q ss_pred CChhhHHHHhhc
Q 013288 171 GNVSYLSLATNS 182 (446)
Q Consensus 171 g~~~Y~~~a~~~ 182 (446)
|+..|++.+.+.
T Consensus 139 gd~~~~~~A~~l 150 (402)
T 1fp3_A 139 AEARYQSEAVDM 150 (402)
T ss_dssp CCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 999999887654
No 21
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=82.73 E-value=4.9 Score=40.09 Aligned_cols=91 Identities=10% Similarity=0.014 Sum_probs=67.3
Q ss_pred HHHHHHHhHHHHHhc------CChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Q 013288 8 LSWSLIEYNHKYQSI------GEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDY 81 (446)
Q Consensus 8 L~w~~~~f~~~y~~~------~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~ 81 (446)
.+|..+-+.+.++-. .+.+.+++.++=-+++|++.|+++ | ++++|=| | |+
T Consensus 235 ~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q~~~----G-~W~~~~d---------~------~~---- 290 (382)
T 3pmm_A 235 NSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQDDS----G-LWHTLLD---------D------PH---- 290 (382)
T ss_dssp HHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHCCTT----S-CEESBTT---------C------TT----
T ss_pred ccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcCCCC----C-ChhhccC---------C------CC----
Confidence 578888888888652 245789999999999999999854 4 6777633 1 21
Q ss_pred CCceeeCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Q 013288 82 PRPVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 82 ~R~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
.|. -|+.|+.+|.+|+-+.+.=-.+ ++++..|+++|+-..+
T Consensus 291 ---~y~---EsSatA~~ay~ll~~~~~g~l~----~~Y~~~a~ka~~~l~~ 331 (382)
T 3pmm_A 291 ---SYL---EASATAGFAYGILKAVRKRYVG----QHYAGVAEKAIRGIVQ 331 (382)
T ss_dssp ---SCE---EHHHHHHHHHHHHHHHHTTSSC----GGGHHHHHHHHHHHHH
T ss_pred ---CCc---cccHHHHHHHHHHHHHHcCCCc----HHHHHHHHHHHHHHHh
Confidence 122 3778899999999988831134 3689999999999988
No 22
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=82.08 E-value=7.1 Score=38.94 Aligned_cols=69 Identities=7% Similarity=0.022 Sum_probs=38.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCC----CCccCCCCccchHHHH-HHHHHHHHhCChhhHHHHhhc
Q 013288 112 NTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPF----IEPYYNSSGYFDEYMW-GAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 112 D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~----~~g~Y~s~~~~De~~w-AAaeLy~aTg~~~Y~~~a~~~ 182 (446)
+.+--++.|+.+++-..-++. ..+.|....+. ......+-+|..-++. +...+|+.|||++|++.++++
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d~k~~~~W~Wt~G~~~~gl~~~ye~Tgd~~y~~~a~~~ 96 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVIDTKGWAGWEWTHGVGLYGIYQYYQQTGDIEMRDIIDRW 96 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEECSSSTTSCSHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccC--ccccccccCCccccccCCCCcCccccHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 444456666666665522222 11333221111 1234445556566654 666789999999999999864
No 23
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=81.26 E-value=2.9 Score=41.59 Aligned_cols=85 Identities=16% Similarity=0.026 Sum_probs=50.2
Q ss_pred CcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHH-HHcC-C---CCCCCCCCCCC--CccCCC---Ccc-chH
Q 013288 90 AGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFA-REGG-K---RRPYCRGNPFI--EPYYNS---SGY-FDE 158 (446)
Q Consensus 90 p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a-~~~~-~---p~~y~~~~~~~--~g~Y~s---~~~-~De 158 (446)
||.+ .+++-.|+.+++++. |+ ++++.|+++++++ .+.. . .+.+......+ .+++.+ ..| .-|
T Consensus 246 pgh~--ie~~wlL~~a~~~~~-~~----~~l~~A~~~~~~~~~~~~~d~~~gg~~~~~~~~g~~~~~l~d~~~~~W~qae 318 (402)
T 1fp3_A 246 PGHA--LEAGWFLLRHSSRSG-DA----KLRAHVIDTFLLLPFRSGWDADHGGLFYFQDADGLCPTQLEWAMKLWWPHSE 318 (402)
T ss_dssp HHHH--HHHHHHHHHHHHHTT-CH----HHHHHHHHHHTHHHHHHHBCTTTCSBCSCEETTSCCCSSTTTTCEEHHHHHH
T ss_pred CCcH--HHHHHHHHHHHHHcC-Ch----HHHHHHHHHHHHHHHHHhccCCCCCEEEeecCCCCccccCcCCCcCcHHHHH
Confidence 4444 356667888888874 44 4677788888888 5421 1 12221100001 111111 001 127
Q ss_pred HHHHHHHHHHHhCChhhHHHHhh
Q 013288 159 YMWGAAWLYYATGNVSYLSLATN 181 (446)
Q Consensus 159 ~~wAAaeLy~aTg~~~Y~~~a~~ 181 (446)
.+.|++.||.+||+.+|++.+.+
T Consensus 319 a~~a~l~ly~~tgd~~yl~~a~~ 341 (402)
T 1fp3_A 319 AMIAFLMGYSESGDPALLRLFYQ 341 (402)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHH
Confidence 79999999999999999998874
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=72.47 E-value=14 Score=36.89 Aligned_cols=144 Identities=8% Similarity=-0.066 Sum_probs=79.2
Q ss_pred chhHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCC
Q 013288 2 SFAMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDY 81 (446)
Q Consensus 2 a~t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~ 81 (446)
.+.-+.++|++.+- |. -+-++.++.++.+++||++-..+.. .|+||+.|.. | |..|+
T Consensus 50 ~~~nar~i~~~a~a---~~--~g~~~~l~~A~~~~~fl~~~~~D~~--~GG~~~s~d~---------d---g~~~~---- 106 (421)
T 2zbl_A 50 LWITARMLHVYSVA---AS--MGRPGAYDLVDHGIKAMNGALRDKK--YGGWYACVND---------Q---GVVDA---- 106 (421)
T ss_dssp HHHHHHHHHHHHHH---HH--TTCTTHHHHHHHHHHHHTTTTBCTT--TSSBCSEEET---------T---EEEEC----
T ss_pred HHHHHHHHHHHHHH---HH--cCChhHHHHHHHHHHHHHHhccCcC--CCeEEEEeCC---------C---CCcCC----
Confidence 34556677765543 44 2558999999999999998754421 0677766621 2 12222
Q ss_pred CCceeeCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcC-C--CCCCCCCC-CCCCccCCCCccch
Q 013288 82 PRPVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGG-K--RRPYCRGN-PFIEPYYNSSGYFD 157 (446)
Q Consensus 82 ~R~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~-~--p~~y~~~~-~~~~g~Y~s~~~~D 157 (446)
...+| + -+.++.+++. +++.+ ++ ..++.|++++++.++.+ . .|-|.... ....+.-....++.
T Consensus 107 ~k~ly------d-~Af~i~al~~-~~~tg-~~----~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~ 173 (421)
T 2zbl_A 107 SKQGY------Q-HFFALLGAAS-AVTTG-HP----EARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNA 173 (421)
T ss_dssp CEEHH------H-HHHHHHHHHH-HHTTT-CT----THHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHH
T ss_pred chhHH------H-HHHHHHHHHH-HHHhC-Cc----cHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcH
Confidence 11111 1 2345555555 44443 33 35677778888888732 1 12221110 00000000012334
Q ss_pred HH--HHHHHHHHHHhCChhhHHHHhh
Q 013288 158 EY--MWGAAWLYYATGNVSYLSLATN 181 (446)
Q Consensus 158 e~--~wAAaeLy~aTg~~~Y~~~a~~ 181 (446)
.+ +-|.+.|+++||+..|++.+.+
T Consensus 174 ~m~~~~al~~l~~~tgd~~~~~~A~~ 199 (421)
T 2zbl_A 174 NMHAVEAFLIVYDVTHDKKWLDRALR 199 (421)
T ss_dssp HHHHHHHHHHHHHTTCCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 33 6788899999999999876654
No 25
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=68.47 E-value=7.9 Score=38.85 Aligned_cols=89 Identities=16% Similarity=0.010 Sum_probs=49.6
Q ss_pred CcchHHHHHHHHHHHhccccc--CCHHHHHHHHHHHHHHHHHHHHcC-C----CCCCCCCCCCCCccCCCCccc--hHHH
Q 013288 90 AGPDLAGEMAAALAAASIVFK--DNTAYSRKLVKGAKTVFDFAREGG-K----RRPYCRGNPFIEPYYNSSGYF--DEYM 160 (446)
Q Consensus 90 p~sd~t~~~AAaLA~As~vfk--~D~~yA~~~L~~A~~~y~~a~~~~-~----p~~y~~~~~~~~g~Y~s~~~~--De~~ 160 (446)
||.+ .+.+=.|..++++.. .| +...++++.|+++++++.+.+ . .|.+......+...=....+. -|.+
T Consensus 246 pgh~--iE~~wlLl~~~~~~~~~~~-~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~~~~~~k~~w~~aea~ 322 (421)
T 2zbl_A 246 PGAW--IEWGRLMLHLHAALEARFE-TPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGKPIVRERVRWPIVEAM 322 (421)
T ss_dssp HHHH--HHHHHHHHHHHHHHHHTTC-CCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSCBSCCCEEHHHHHHHH
T ss_pred CChH--HHHHHHHHHHHHHcccccc-cchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCCccCCCcccHHHHHHH
Confidence 4444 355556666666653 12 000158889999999986632 1 122211100010000011122 3778
Q ss_pred HHHHHHHHHhCChhhHHHHhh
Q 013288 161 WGAAWLYYATGNVSYLSLATN 181 (446)
Q Consensus 161 wAAaeLy~aTg~~~Y~~~a~~ 181 (446)
-|++.||+.||+++|++.+.+
T Consensus 323 ~all~l~~~tgd~~yl~~a~~ 343 (421)
T 2zbl_A 323 GTAYALYTLTDDSQYEEWYQK 343 (421)
T ss_dssp HHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHH
Confidence 899999999999999988774
No 26
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=67.53 E-value=11 Score=37.16 Aligned_cols=96 Identities=6% Similarity=-0.025 Sum_probs=65.7
Q ss_pred HHHHHHHHhHHHHHhc----CChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCC
Q 013288 7 MLSWSLIEYNHKYQSI----GEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYP 82 (446)
Q Consensus 7 ~L~w~~~~f~~~y~~~----~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~ 82 (446)
=.+|...-+.+.++-. .+.+.+++.++=-+++|++.|+.+ .+++++|=|. |+...
T Consensus 214 g~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~q~~~----dG~W~~~ld~---------------~~~~~-- 272 (373)
T 1nc5_A 214 SIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRYQDKE----TGLWYQIVDK---------------GDRSD-- 272 (373)
T ss_dssp HHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTTSCTT----TSCCBSBTTC---------------TTSTT--
T ss_pred hHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHhcCCC----CCceeeecCC---------------CCCCC--
Confidence 4578888888888754 245779999999999999999863 3356665321 11000
Q ss_pred CceeeCCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Q 013288 83 RPVQTINAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 83 R~~~~~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
-| +-|..++.++.+|+-+.+.=-.| ++++..|+++|+...+
T Consensus 273 --~~---~EsSatA~~ay~l~~g~~~g~l~----~~Y~~~a~k~~~~l~~ 313 (373)
T 1nc5_A 273 --NW---LESSGSCLYMYAIAKGINKGYLD----RAYETTLLKAYQGLIQ 313 (373)
T ss_dssp --CC---BCHHHHHHHHHHHHHHHHHTSSC----GGGHHHHHHHHHHHHH
T ss_pred --CC---ccccHHHHHHHHHHHHHHCCCCc----HHHHHHHHHHHHHHHH
Confidence 12 22667889999998876541144 3688999999998866
No 27
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=65.06 E-value=8 Score=38.23 Aligned_cols=61 Identities=15% Similarity=0.133 Sum_probs=37.8
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccchHHHHHH---HHHHHHhCChhhHHHHhh
Q 013288 118 KLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYFDEYMWGA---AWLYYATGNVSYLSLATN 181 (446)
Q Consensus 118 ~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~De~~wAA---aeLy~aTg~~~Y~~~a~~ 181 (446)
++++.|+++.++... +|.. .++.-.....|+...|.|.++.+. ++|++.||+++|++.+.+
T Consensus 107 ~yl~~a~~la~~l~~--~~r~-~~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~ 170 (373)
T 1nc5_A 107 RYVKAAKRLRSLYGT--LNRT-SEGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVL 170 (373)
T ss_dssp HHHHHHHHHHGGGGT--SCBC-TTSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--ccCC-CCCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 467788888888866 5521 010000011223344788876554 688888999999998864
No 28
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=61.20 E-value=97 Score=31.40 Aligned_cols=78 Identities=15% Similarity=0.104 Sum_probs=43.4
Q ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcC--------CCCCCCCCCCCCCccCCCCccchH---HHHHHH
Q 013288 96 GEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGG--------KRRPYCRGNPFIEPYYNSSGYFDE---YMWGAA 164 (446)
Q Consensus 96 ~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~--------~p~~y~~~~~~~~g~Y~s~~~~De---~~wAAa 164 (446)
|-+-.+|+.++++++ |+ ++++.|++..+|..+.. .-+....+ ...+ +. .++.|| +.|+-+
T Consensus 85 Gv~l~gl~~ay~~Tg-d~----kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~--~r~~-~~-~~~LDD~g~~~~~Li 155 (445)
T 3k11_A 85 GVTYSALIAAAETTG-DK----RYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ--LLQI-LT-PHALDDAGAVCTAMI 155 (445)
T ss_dssp HHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH--HHHH-HS-CCSGGGTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHC-CH----HHHHHHHHHHHHHHhccchhhhhhhccCCeecc--cccc-cC-CCcchhHHHHHHHHH
Confidence 567788888888775 33 34444555444433200 00110000 0001 11 223444 458999
Q ss_pred HHHHHhCChhhHHHHhhc
Q 013288 165 WLYYATGNVSYLSLATNS 182 (446)
Q Consensus 165 eLy~aTg~~~Y~~~a~~~ 182 (446)
+||++|++.+|++.+.+.
T Consensus 156 ~lY~~T~d~~yl~~a~~~ 173 (445)
T 3k11_A 156 KLRLKDESLPVDGLIQNY 173 (445)
T ss_dssp HHHHHCTTCCCHHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHH
Confidence 999999999999998754
No 29
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=52.89 E-value=75 Score=31.60 Aligned_cols=116 Identities=18% Similarity=0.124 Sum_probs=67.0
Q ss_pred ChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHH
Q 013288 24 EYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALA 103 (446)
Q Consensus 24 ~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA 103 (446)
+.+.+++.|+=.++|+++.+..+ |. |-.......++.+.-. -| +..++-+|.
T Consensus 248 ~~~~~~~~i~~~l~~l~~~~~~~----g~--------------------wp~~~~~~~~~~~~wC-hG---~~Gi~~~l~ 299 (411)
T 3e6u_A 248 SQGKLHSLVKPSVDYVCQLKFPS----GN--------------------YPPCIGDNRDLLVHWC-HG---APGVIYMLI 299 (411)
T ss_dssp CHHHHHHTHHHHHHHHHHTCCTT----SC--------------------CCSBTTCCCCCCCSSS-SS---HHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHHhhccC----CC--------------------CCCCCCcccCcccccc-CC---cHHHHHHHH
Confidence 45778899999999999986433 21 1100000111222211 23 234566677
Q ss_pred HhcccccCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccchHHHHHHHHHHHHhCChhhHHHHhhc
Q 013288 104 AASIVFKDNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYFDEYMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 104 ~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~De~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
.+++++ .|+++-+.+.+.++.+|+...-...++- ..+.+ -.+..-+.||+.|++++|++.+.+.
T Consensus 300 ~~~~~~-~~~~~~~~a~~~~~~~~~~g~~~~~~~l----------ChG~a----G~~~~ll~~~~~t~~~~~~~~A~~~ 363 (411)
T 3e6u_A 300 QAYKVF-REEKYLCDAYQCADVIWQYGLLKKGYGL----------CHGSA----GNAYAFLTLYNLTQDMKYLYRACKF 363 (411)
T ss_dssp HHHHHH-CCHHHHHHHHHHHHHHHHHCSBTTCSCS----------TTSHH----HHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHc-CCHHHHHHHHHHHHHHHhcCccCCCCce----------ecChH----HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 777777 4677777777777777664211001111 11111 2366788899999999999988754
No 30
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=51.71 E-value=1.9e+02 Score=28.59 Aligned_cols=21 Identities=10% Similarity=0.142 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHhCChhhHHH
Q 013288 158 EYMWGAAWLYYATGNVSYLSL 178 (446)
Q Consensus 158 e~~wAAaeLy~aTg~~~Y~~~ 178 (446)
-.+|+.+.|++.|+++++++.
T Consensus 169 G~l~aLl~L~~~~~~~~~~~~ 189 (411)
T 3e6u_A 169 GYIYALLFVNKNFGVEKIPQS 189 (411)
T ss_dssp HHHHHHHHHHHHHSSCCSCHH
T ss_pred HHHHHHHHHHHHcCCccchHH
Confidence 358999999999999877654
No 31
>2p0v_A Hypothetical protein BT3781; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.10A {Bacteroides thetaiotaomicron vpi-5482} SCOP: a.102.1.8
Probab=43.66 E-value=1.2e+02 Score=31.16 Aligned_cols=106 Identities=13% Similarity=0.040 Sum_probs=62.6
Q ss_pred HHHhcCCh-HHHHHHHHHHHHHHHhhccccccccC--eEEEEecCCCC--------CCCCC--CCCCCCC--CCCCCCCC
Q 013288 18 KYQSIGEY-DHMRELIKWGTDYLLLTFNSSATKID--KIYAQVGGSQN--------GTSEP--NDHNCWQ--RPEDMDYP 82 (446)
Q Consensus 18 ~y~~~~~~-pdiLde~kwg~D~llk~~~~~~~~~g--~~y~qVgd~~~--------~~~~~--~Dh~~W~--~Pe~~~~~ 82 (446)
...+..-+ +..++-|+-.+++|..+|..+ + +.|.-...... |.+.| .-...|. +|++|...
T Consensus 195 ~TgD~~~f~~~w~~av~~il~~l~~eq~~~----~~~~~Y~F~r~t~~~~dtl~~~G~G~pv~~tGLi~S~fRPSDDa~~ 270 (489)
T 2p0v_A 195 TTGDASVFSDEWLQAIANVLKTFKEQQRKD----DAKGPYRFQRKTERALDTMTNDGWGNPVKPVGLIASAFRPSDDATT 270 (489)
T ss_dssp HHCCCTTSSHHHHHHHHHHHHHHHHTTCSS----CSSCSCCCCCCBSCGGGSCHHHHTCSCCCCSSCCCCSBCTTSCBCS
T ss_pred HhCCchhhHHHHHHHHHHHHHHHHHHhccc----CCCCCceEeecCCCcccccccCCCCCccCCCCceeCCCCCCCcchh
Confidence 33444444 356688999999999987765 3 22221100000 00000 0122333 45655432
Q ss_pred CceeeCCCcchHHHHHHHHHHHhccccc---CCHHHHHHHHHHHHHHHHHHHH
Q 013288 83 RPVQTINAGPDLAGEMAAALAAASIVFK---DNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 83 R~~~~~~p~sd~t~~~AAaLA~As~vfk---~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
+. |-+ | | .++++++|-.++.+.+ .|.++|++|.+.|+++-+--++
T Consensus 271 yg-~~i-p-S--N~~a~v~L~~aaeia~~v~~d~~la~~~~~lA~eI~~gI~~ 318 (489)
T 2p0v_A 271 FQ-FLV-P-S--NFFAVTSLRKAAEILNTVNRKPALAKECTALADEVEKALKK 318 (489)
T ss_dssp SS-EEH-H-H--HHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cC-cch-H-H--HHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHH
Confidence 22 332 3 3 4588999999998887 4789999999999998877666
No 32
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=38.44 E-value=2e+02 Score=28.61 Aligned_cols=43 Identities=5% Similarity=-0.042 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhcc-ccccccCeEEEEec
Q 013288 4 AMTMLSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFN-SSATKIDKIYAQVG 58 (446)
Q Consensus 4 t~~~L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~-~~~~~~g~~y~qVg 58 (446)
.+..|+|+...+ +-|+.+++++--++++++-+- ++ +++||.+-
T Consensus 178 ni~~L~~A~~~~--------gd~~y~~~A~~ha~~~l~~~~r~d----gs~~h~~~ 221 (397)
T 2zzr_A 178 NIQLLFFAYEQT--------GDEKYRQVAVNHFYASANNVVRDD----SSAFHTFY 221 (397)
T ss_dssp HTHHHHHHHHHH--------CCHHHHHHHHHHHHHHHHHTBCTT----SCBCSEEE
T ss_pred HHHHHHHHHHHh--------CCHHHHHHHHHHHHHHHHhCcCCC----CCeEEEEE
Confidence 456677764443 458899999988888888764 45 78887765
No 33
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=35.67 E-value=3.1e+02 Score=26.87 Aligned_cols=97 Identities=12% Similarity=0.210 Sum_probs=59.9
Q ss_pred HHHHHHHhHHHHHhcCChHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceee
Q 013288 8 LSWSLIEYNHKYQSIGEYDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQT 87 (446)
Q Consensus 8 L~w~~~~f~~~y~~~~~~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~ 87 (446)
.+|...-+.+.|+.++ -+..|+.++=-+++|++-++++ +.- +|.........|+.
T Consensus 223 qAw~i~gl~~ly~~T~-d~~yL~~A~~la~~~l~~~~~d----~~p------------------ywd~~~~~~~~~~~-- 277 (377)
T 2ahf_A 223 QAWGIYGFALNSRYLG-NADLLETAKRMARHFLARVPED----GVV------------------YWDFEVPQEPSSYR-- 277 (377)
T ss_dssp HHHHHHHHHHHHHHHT-CHHHHHHHHHHHHHHHTTCCTT----SSC------------------BSBTTSCCCTTSCB--
T ss_pred HHHHHHHHHHHHHHHC-ChHHHHHHHHHHHHHHHhhHHh----CCc------------------ccccCCCccCCCcc--
Confidence 3788888888888764 4778999999999999988554 221 22221111111222
Q ss_pred CCCcchHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHH
Q 013288 88 INAGPDLAGEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 88 ~~p~sd~t~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
+ +.+++.+|.+|-..++....++.-.++++++|+++.+-...
T Consensus 278 -d--~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~ 319 (377)
T 2ahf_A 278 -D--SSASAITACGLLEIASQLDESDPERQRFIDAAKTTVTALRD 319 (377)
T ss_dssp -C--HHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHHHHHH
T ss_pred -C--CCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHH
Confidence 2 34455666666666666531223456788888888877755
No 34
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=35.27 E-value=87 Score=31.41 Aligned_cols=83 Identities=19% Similarity=0.145 Sum_probs=57.6
Q ss_pred hHHHHHHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCCCCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHH
Q 013288 25 YDHMRELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPNDHNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAA 104 (446)
Q Consensus 25 ~pdiLde~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~Dh~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~ 104 (446)
-+.+.+-++=|++|||.||..+ |+.= |+ | |+....... .+ =+-|+++.+.-.|+.
T Consensus 170 ~~~y~~Ai~Rgl~wlL~mQ~~n----GGWp-qF-----------d------pdn~~y~~~-Ip--FnDDvt~rvle~L~~ 224 (408)
T 1r76_A 170 AAPYRDAALKGIEYLLASQFPN----GGWP-QV-----------W------PLEGGYHDA-IT--YNDDALVHVAELLSD 224 (408)
T ss_dssp CHHHHHHHHHHHHHHHHHSCTT----SCCB-SB-----------S------SCCCGGGGS-EE--CGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHccCCC----CCCc-Cc-----------C------ccccccccC-CC--cCcHHHHHHHHHHHH
Confidence 4788999999999999999876 3221 10 1 221110011 11 234788888888887
Q ss_pred hcc---ccc-CCHHHHHHHHHHHHHHHHHHHH
Q 013288 105 ASI---VFK-DNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 105 As~---vfk-~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
... -|. .|+++..+...+.+++-+|..+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~av~Rgi~~Ll~ 256 (408)
T 1r76_A 225 IAAGRDGFGFVPPAIRTRALEATNAAIHCIVE 256 (408)
T ss_dssp HHHTCTTCTTSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCcccccchhhhhhHHHHHHHHHHHHHH
Confidence 766 355 6888999999999999999988
No 35
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=34.79 E-value=24 Score=36.09 Aligned_cols=24 Identities=25% Similarity=0.266 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHhCChhhHHHHhhc
Q 013288 159 YMWGAAWLYYATGNVSYLSLATNS 182 (446)
Q Consensus 159 ~~wAAaeLy~aTg~~~Y~~~a~~~ 182 (446)
++.|.+|||++|++..|++.+.+.
T Consensus 431 lL~allEL~~atq~~~~l~lA~~~ 454 (543)
T 2v8i_A 431 ALFALLDLYHASQVADYRKLAEKI 454 (543)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 578999999999999999998754
No 36
>2fba_A Glucoamylase Glu1; (alpha-alpha)6 barrel, TRIS, hydrolase; 1.10A {Saccharomycopsis fibuligera} SCOP: a.102.1.1 PDB: 1ayx_A* 2f6d_A
Probab=28.31 E-value=1.6e+02 Score=30.12 Aligned_cols=94 Identities=19% Similarity=0.306 Sum_probs=63.4
Q ss_pred HHHHHHHHHhHHHHHhcCCh---------------HHHH-HHHHHHHHHHHhhccccccccCeEEEEecCCCCCCCCCCC
Q 013288 6 TMLSWSLIEYNHKYQSIGEY---------------DHMR-ELIKWGTDYLLLTFNSSATKIDKIYAQVGGSQNGTSEPND 69 (446)
Q Consensus 6 ~~L~w~~~~f~~~y~~~~~~---------------pdiL-de~kwg~D~llk~~~~~~~~~g~~y~qVgd~~~~~~~~~D 69 (446)
.+.++++..|-......+.. .++- ..||--+||+.+-.+.+ |
T Consensus 148 g~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~v~~~w~~p----------------------d 205 (492)
T 2fba_A 148 ALRAYAISRYLNDVNSLNEGKLVLTDSGDINFSSTEDIYKNIIKPDLEYVIGYWDST----------------------G 205 (492)
T ss_dssp HHHHHHHHHHHHHHHHHSTTCCSSTTCTTCSCSSHHHHHHHTHHHHHHHHHHHTTSC----------------------E
T ss_pred hHHHHHHHHHHHHhhccccchhhhhhhccccccccHHHHHHHHHHHHHHHHHhcCCC----------------------C
Confidence 34555666665555554443 5675 79999999999988765 5
Q ss_pred CCCCCCCCCCCCCCceeeCCCcchHHHHHHHHHHHhccccc--CCHHHHHHHHHHHHHHHHHHHH
Q 013288 70 HNCWQRPEDMDYPRPVQTINAGPDLAGEMAAALAAASIVFK--DNTAYSRKLVKGAKTVFDFARE 132 (446)
Q Consensus 70 h~~W~~Pe~~~~~R~~~~~~p~sd~t~~~AAaLA~As~vfk--~D~~yA~~~L~~A~~~y~~a~~ 132 (446)
+..|..-. .+..| | .+++-+||-.++++-+ .+++.+++|.+.|.++.+....
T Consensus 206 ~dlWEer~----g~~~~-----T--~~~~~~AL~~aa~lA~~~g~~~~a~~w~~~ad~i~~~I~~ 259 (492)
T 2fba_A 206 FDLWEENQ----GRHFF-----T--SLVQQKALAYAVDIAKSFDDGDFANTLSSTASTLESYLSG 259 (492)
T ss_dssp ECTTSCCE----ECCHH-----H--HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHS
T ss_pred CCCcCccC----CCChH-----H--HHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHH
Confidence 55665322 12222 2 3466677766666655 6789999999999999888877
No 37
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=24.11 E-value=4.9e+02 Score=25.08 Aligned_cols=71 Identities=7% Similarity=-0.062 Sum_probs=40.8
Q ss_pred HHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCccCCCCccchHHHHHHHHHHHHhCChhh
Q 013288 96 GEMAAALAAASIVFKDNTAYSRKLVKGAKTVFDFAREGGKRRPYCRGNPFIEPYYNSSGYFDEYMWGAAWLYYATGNVSY 175 (446)
Q Consensus 96 ~~~AAaLA~As~vfk~D~~yA~~~L~~A~~~y~~a~~~~~p~~y~~~~~~~~g~Y~s~~~~De~~wAAaeLy~aTg~~~Y 175 (446)
..++-++..+++++ .|+.|.+.+.+.++.+++.......|+-. -| . --.+.....|++.|++++|
T Consensus 282 ~Gi~~~l~~~~~~~-~d~~~~~~a~~~~~~~~~~~~~~~~~~LC-------HG---~----aG~~~~l~~l~~~~~~~~~ 346 (409)
T 2g0d_A 282 PGISLLYLYGGLAL-DNDYFVDKAEKILESAMQRKLGIDSYMIC-------HG---Y----SGLIEICSLFKRLLNTKKF 346 (409)
T ss_dssp HHHHHHHHHHHHHT-TCHHHHHHHHHHHHHHHHHCTTCCSCCTT-------TS---H----HHHHHHHHHHHHHHCCCTT
T ss_pred HHHHHHHHHHHHHc-CCHHHHHHHHHHHHHHHHhccCCCCCCCC-------Ch---H----HHHHHHHHHHHHHhCCHHH
Confidence 35677777777766 46666555555555555430000011110 01 1 1236677889999999999
Q ss_pred HHHHhh
Q 013288 176 LSLATN 181 (446)
Q Consensus 176 ~~~a~~ 181 (446)
++.+.+
T Consensus 347 ~~~a~~ 352 (409)
T 2g0d_A 347 DSYMEE 352 (409)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888864
Done!