BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>013289
MGFDDTNECPQLCKLAYEYLKKSKGCEDNIYEYFSKEAEPESLYVKLVEEFDRCILSYFT
FHWSHASLMISQVLSVESEKKTKLKDFIMAATRKQRFEKVTKDLKMKRVFSTLVEEMKAI
RREGESHCTDVMVPAALSERSPVLLLMGGGMGAGKSTVLKDIMKESFWSGAATNAVVVEA
DAFKETDVIYRALSSKGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLSWV
PFVEQTIAMARNVHKSRYRMGVGYKVNEDGTVIENYWEQVKEGEEDYQQKENRQVFSRKP
YRIELVGVVCDAYLAVVRGIRRAIMMKRAVRVNSQLKSHKRFANAFRNYCELVDNARLYC
TNAVGGPPRLIAWKDGDSNLLVDSDEIKCLTRVGSLNADADSVYELHSEPNPIFEPGSVW
NDIVLCPSRAGLQLELRTSIKKIENY

High Scoring Gene Products

Symbol, full name Information P value
AT1G04280 protein from Arabidopsis thaliana 2.7e-162
AT2G30630 protein from Arabidopsis thaliana 7.4e-153

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  013289
        (446 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2018304 - symbol:AT1G04280 species:3702 "Arabi...  1580  2.7e-162  1
TAIR|locus:2054497 - symbol:AT2G30630 species:3702 "Arabi...  1491  7.4e-153  1


>TAIR|locus:2018304 [details] [associations]
            symbol:AT1G04280 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            [GO:0016020 "membrane" evidence=IDA] InterPro:IPR010488
            Pfam:PF06414 EMBL:CP002684 GO:GO:0005524 GO:GO:0016020
            GO:GO:0016310 GO:GO:0016301 EMBL:AK227002 IPI:IPI00549100
            RefSeq:NP_171924.2 UniGene:At.42464 ProteinModelPortal:Q0WUY1
            SMR:Q0WUY1 STRING:Q0WUY1 PRIDE:Q0WUY1 EnsemblPlants:AT1G04280.1
            GeneID:839555 KEGG:ath:AT1G04280 TAIR:At1g04280
            HOGENOM:HOG000238325 InParanoid:Q0WUY1 OMA:RAISSMG PhylomeDB:Q0WUY1
            ProtClustDB:CLSN2683120 Genevestigator:Q0WUY1 Uniprot:Q0WUY1
        Length = 534

 Score = 1580 (561.2 bits), Expect = 2.7e-162, P = 2.7e-162
 Identities = 310/446 (69%), Positives = 362/446 (81%)

Query:     1 MGFDDTNECPQLCKLAYEYLKKSKGCEDNIYEYFSKEAEPESLYVKLVEEFDRCILSYFT 60
             +GF+D NE PQLCKLA  YL K+KG ++N+ EY   EAE +SLYV L+EEFDRCIL+YF+
Sbjct:    88 LGFEDPNEYPQLCKLANGYLLKTKGYDENVDEYLENEAERDSLYVHLLEEFDRCILTYFS 147

Query:    61 FHWSHASLMISQVLSVESEKKT-KLKDFIMAATRKQRFEKVTKDLKMKRVFSTLVEEMKA 119
             F+W+ +S +ISQ LS ES++K  KLKDF+MAATRKQRFE+VTKDLK+KRV STLVEEM+ 
Sbjct:   148 FNWTQSSNLISQALSDESDQKVPKLKDFVMAATRKQRFERVTKDLKVKRVISTLVEEMRV 207

Query:   120 IRR-EGESHCTDVMVPAALSERSPVXXXXXXXXXXXKSTVLKDIMKESFWSGAATNAVVV 178
             I     E HCT+VM P A ++RSPV           KSTVLKDI  ESFWS A  +AVV+
Sbjct:   208 IGSGSSEPHCTEVMSPVAHNKRSPVLLLMGGGMGAGKSTVLKDIFLESFWSEAQADAVVI 267

Query:   179 EADAFKETDVIYRALSSKGHHDDMLQTAELVHQSSTDAASSLLVTALNEGRDVIMDGTLS 238
             EADAFKETDVIYRALSS+GHHDDMLQTAELVHQSSTDAASSLLVTALN+GRDVIMDGTLS
Sbjct:   268 EADAFKETDVIYRALSSRGHHDDMLQTAELVHQSSTDAASSLLVTALNDGRDVIMDGTLS 327

Query:   239 WVPFVEQTIAMARNVHKSRYRMGVGYKVNEDGTVIENYWEQVKEGEEDYQQKENRQVFSR 298
             W PFVEQ I MARNVHK +YRMG GYKV+E+GT+ E YWE     EE+ + KEN +  + 
Sbjct:   328 WEPFVEQMIEMARNVHKQKYRMGEGYKVSEEGTITEKYWE-----EEEEETKENGKQQNL 382

Query:   299 KPYRIELVGVVCDAYLAVVRGIRRAIMMKRAVRVNSQLKSHKRFANAFRNYCELVDNARL 358
             KPYRIELVGVVCDAYLAV RGIRRA+M+KRAVRV  QL SHKRFANAF  YCELVDNARL
Sbjct:   383 KPYRIELVGVVCDAYLAVARGIRRALMVKRAVRVKPQLNSHKRFANAFPKYCELVDNARL 442

Query:   359 YCTNAVGGPPRLIAWKDGDSNLLVDSDEIKCLTRVGSLNADADSVYELHSEPNPIFEPGS 418
             YCTNAVGGPPRLIAWKDG+S LLVD ++I CL RV SLN DA+S+YEL+ +P+ + +PGS
Sbjct:   443 YCTNAVGGPPRLIAWKDGNSKLLVDPEDIDCLKRVSSLNPDAESIYELYPDPSQLSKPGS 502

Query:   419 VWNDIVLCPSRAGLQLELRTSIKKIE 444
             VWND+VL PSR  +Q EL  +I++IE
Sbjct:   503 VWNDVVLVPSRPKVQKELSDAIRRIE 528


>TAIR|locus:2054497 [details] [associations]
            symbol:AT2G30630 species:3702 "Arabidopsis thaliana"
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0016301 "kinase activity" evidence=IEA]
            InterPro:IPR010488 Pfam:PF06414 GO:GO:0005524 EMBL:CP002685
            GO:GO:0016301 IPI:IPI00522740 RefSeq:NP_973567.1 UniGene:At.38338
            ProteinModelPortal:F4INW4 PRIDE:F4INW4 EnsemblPlants:AT2G30630.2
            GeneID:817613 KEGG:ath:AT2G30630 OMA:EENIFAF Uniprot:F4INW4
        Length = 552

 Score = 1491 (529.9 bits), Expect = 7.4e-153, P = 7.4e-153
 Identities = 301/469 (64%), Positives = 355/469 (75%)

Query:     1 MGFDDTNECPQLCKLAYEYLKKSKGCEDNIYEYFSKEAEPESLYVKLVEEFDRCILSYFT 60
             MGF D  ECP LCKLA EY++KS  CE++IY +FS+E   +SL++KLVEEF+RCILSYF 
Sbjct:    83 MGFKDRRECPHLCKLANEYIRKSGSCEEDIYSFFSEEPGADSLFIKLVEEFERCILSYFA 142

Query:    61 FHWSHASLMISQV---------------------LSVESEKKTKLKDFIMAATRKQRFEK 99
             +HWSHA LMISQV                     LS + E K KLK  +MAATR+QRFE+
Sbjct:   143 YHWSHADLMISQVTNKLSLSLLCYITNRPKTFQILSADVEPKKKLKHIVMAATREQRFER 202

Query:   100 VTKDLKMKRVFSTLVEEMKA--IRREGESHCTDVMVPAALSERSPVXXXXXXXXXXXKST 157
             VTK+LK+ RVF+TLVEEMKA  I    +S CT+VM P A  +RSPV           KST
Sbjct:   203 VTKNLKVARVFNTLVEEMKAMGIASVDDSECTEVMAPVAHKDRSPVLLLMGGGMGAGKST 262

Query:   158 VLKDIMKESFWSGAATNAVVVEADAFKETDVIYRALSSKGHHDDMLQTAELVHQSSTDAA 217
             VLKDI+KE FW+GA  +AVV+EADAFKE+DVIYRALS++GH D M++TAE VHQSSTDAA
Sbjct:   263 VLKDILKEPFWAGA--DAVVIEADAFKESDVIYRALSARGHVD-MIKTAEFVHQSSTDAA 319

Query:   218 SSLLVTALNEGRDVIMDGTLSWVPFVEQTIAMARNVHKSRYRMGVGYKVNEDGTVIENYW 277
             SSLLVTALNEGRDVIMDGTLSWVPFV QTI MARNVH+ RYRMG GYKV E+G VIENYW
Sbjct:   320 SSLLVTALNEGRDVIMDGTLSWVPFVVQTITMARNVHRHRYRMGAGYKVGENGDVIENYW 379

Query:   278 EQVKEGEEDYQQKENRQVFSRKPYRIELVGVVCDAYLAVVRGIRRAIMMKRAVRVNSQLK 337
             E++  GE    Q++ R+   RKPYRIELVGVVCDAYLAV+RGIRRAIM +RAVRV SQL+
Sbjct:   380 ERI--GERQQLQEDGRE---RKPYRIELVGVVCDAYLAVIRGIRRAIMCRRAVRVRSQLR 434

Query:   338 SHKRFANAFRNYCELVDNARLYCTNAVGGPPRLIAWKDGDSNLLVDSDEIKCLTRVGSLN 397
             SHKRFANAF  YC LVDNARLYCTNA+ G P+LI WK+ +  LLVD +EI CL  VG LN
Sbjct:   435 SHKRFANAFLTYCNLVDNARLYCTNALEGSPKLIGWKEKEKTLLVDPEEIDCLKNVGRLN 494

Query:   398 ADADSVYELHSEPNPIFEPGSVWNDIVLCPSRAGLQLELRTSIKKIENY 446
              +ADS+YEL+  PNP  E GS+W DIVL PSR  +Q EL+ SI+K+E +
Sbjct:   495 ENADSIYELYRNPNPACEAGSIWKDIVLSPSRFNIQQELKYSIQKVERF 543


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.132   0.384    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      446       435   0.00087  118 3  11 22  0.40    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  279 KB (2146 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  36.51u 0.09s 36.60t   Elapsed:  00:00:02
  Total cpu time:  36.51u 0.09s 36.60t   Elapsed:  00:00:02
  Start:  Fri May 10 08:51:35 2013   End:  Fri May 10 08:51:37 2013

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